Query psy14945
Match_columns 629
No_of_seqs 466 out of 2516
Neff 7.2
Searched_HMMs 46136
Date Fri Aug 16 16:28:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14945.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14945hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0359|consensus 100.0 4.1E-60 9E-65 486.9 16.6 321 1-510 187-509 (520)
2 KOG0361|consensus 100.0 4.2E-53 9E-58 429.3 21.0 365 95-510 148-517 (543)
3 TIGR02347 chap_CCT_zeta T-comp 100.0 1.8E-50 3.9E-55 452.7 34.4 373 100-510 146-520 (531)
4 TIGR02339 thermosome_arch ther 100.0 1.4E-50 3.1E-55 454.1 33.3 360 108-510 152-514 (519)
5 cd03343 cpn60 cpn60 chaperonin 100.0 1.9E-50 4.1E-55 453.3 32.3 359 108-510 151-511 (517)
6 TIGR02344 chap_CCT_gamma T-com 100.0 1.7E-50 3.6E-55 454.1 31.7 360 109-510 153-516 (525)
7 cd03339 TCP1_epsilon TCP-1 (CT 100.0 3.9E-50 8.5E-55 451.0 33.5 363 101-510 155-522 (526)
8 cd03335 TCP1_alpha TCP-1 (CTT 100.0 1.3E-49 2.7E-54 447.0 33.8 368 100-510 138-520 (527)
9 PTZ00212 T-complex protein 1 s 100.0 9.3E-50 2E-54 448.1 32.6 360 100-510 159-520 (533)
10 cd03336 TCP1_beta TCP-1 (CTT o 100.0 1.2E-49 2.7E-54 445.8 33.3 359 100-510 147-508 (517)
11 TIGR02343 chap_CCT_epsi T-comp 100.0 1.6E-49 3.4E-54 445.9 32.8 363 101-510 159-526 (532)
12 cd03340 TCP1_eta TCP-1 (CTT or 100.0 4.4E-49 9.4E-54 442.4 34.7 360 100-510 149-514 (522)
13 TIGR02342 chap_CCT_delta T-com 100.0 1.1E-48 2.5E-53 438.1 34.0 363 102-510 140-511 (517)
14 TIGR02340 chap_CCT_alpha T-com 100.0 4.6E-48 1E-52 434.9 34.5 367 101-510 143-524 (536)
15 cd03338 TCP1_delta TCP-1 (CTT 100.0 4E-48 8.7E-53 434.1 33.2 358 108-510 144-510 (515)
16 TIGR02341 chap_CCT_beta T-comp 100.0 5.2E-48 1.1E-52 432.4 33.7 359 100-510 148-509 (519)
17 TIGR02345 chap_CCT_eta T-compl 100.0 6.6E-48 1.4E-52 432.4 33.0 360 101-510 150-514 (522)
18 KOG0364|consensus 100.0 1.3E-49 2.8E-54 410.0 15.9 344 119-510 171-515 (527)
19 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 8.3E-48 1.8E-52 427.6 30.2 326 109-510 150-477 (484)
20 TIGR02346 chap_CCT_theta T-com 100.0 5.9E-47 1.3E-51 425.0 31.6 354 109-510 157-514 (531)
21 KOG0363|consensus 100.0 1.3E-47 2.9E-52 386.9 21.4 371 89-510 141-513 (527)
22 cd03337 TCP1_gamma TCP-1 (CTT 100.0 1.6E-45 3.6E-50 409.1 28.0 325 102-510 147-475 (480)
23 COG0459 GroL Chaperonin GroEL 100.0 1.5E-44 3.3E-49 400.3 27.4 397 64-510 67-508 (524)
24 cd00309 chaperonin_type_I_II c 100.0 6.6E-44 1.4E-48 395.6 28.7 315 108-510 144-460 (464)
25 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 2.2E-43 4.8E-48 393.5 30.8 358 100-510 117-478 (485)
26 KOG0358|consensus 100.0 1.7E-44 3.8E-49 366.0 18.4 362 108-510 162-528 (534)
27 cd03341 TCP1_theta TCP-1 (CTT 100.0 2.7E-43 5.8E-48 390.6 28.5 316 109-510 147-466 (472)
28 KOG0360|consensus 100.0 1.1E-43 2.5E-48 369.3 18.5 365 99-510 148-530 (545)
29 KOG0361|consensus 100.0 1.7E-41 3.7E-46 344.8 8.6 365 221-628 70-505 (543)
30 KOG0362|consensus 100.0 1.5E-41 3.2E-46 355.8 5.6 361 222-628 77-503 (537)
31 KOG0362|consensus 100.0 6.5E-38 1.4E-42 328.5 29.3 353 108-510 161-515 (537)
32 PRK00013 groEL chaperonin GroE 100.0 1.4E-37 3.1E-42 348.6 26.3 308 117-510 153-518 (542)
33 PTZ00114 Heat shock protein 60 100.0 3.2E-37 6.9E-42 347.3 27.6 307 118-510 166-534 (555)
34 cd03344 GroEL GroEL_like type 100.0 7.9E-37 1.7E-41 341.6 28.7 304 118-509 152-514 (520)
35 PRK12849 groEL chaperonin GroE 100.0 4.6E-37 1E-41 344.5 25.3 306 117-510 153-517 (542)
36 PRK12851 groEL chaperonin GroE 100.0 1.4E-36 3E-41 340.8 26.5 307 117-510 154-518 (541)
37 PRK12850 groEL chaperonin GroE 100.0 4.8E-36 1E-40 336.7 26.6 306 118-510 155-518 (544)
38 PRK12852 groEL chaperonin GroE 100.0 4.1E-36 9E-41 337.8 25.6 306 118-510 155-519 (545)
39 KOG0357|consensus 100.0 5.9E-38 1.3E-42 314.9 9.4 288 223-510 71-390 (400)
40 TIGR02342 chap_CCT_delta T-com 100.0 3.5E-37 7.6E-42 345.4 14.9 371 222-628 60-499 (517)
41 TIGR02348 GroEL chaperonin Gro 100.0 1E-35 2.2E-40 333.2 25.6 305 118-510 153-516 (524)
42 CHL00093 groEL chaperonin GroE 100.0 2.8E-36 6.1E-41 338.1 20.6 281 160-510 181-519 (529)
43 KOG0358|consensus 100.0 1.4E-38 3E-43 323.1 0.4 370 222-628 77-516 (534)
44 PTZ00212 T-complex protein 1 s 100.0 3.9E-37 8.4E-42 346.0 11.8 369 222-628 78-508 (533)
45 cd03336 TCP1_beta TCP-1 (CTT o 100.0 1.1E-36 2.3E-41 341.5 13.5 358 222-628 66-496 (517)
46 cd03339 TCP1_epsilon TCP-1 (CT 100.0 2.2E-36 4.7E-41 339.9 14.7 361 222-628 74-510 (526)
47 TIGR02343 chap_CCT_epsi T-comp 100.0 2.4E-36 5.3E-41 339.3 14.8 372 222-628 78-514 (532)
48 TIGR02341 chap_CCT_beta T-comp 100.0 1.5E-36 3.2E-41 340.1 12.8 370 222-628 67-497 (519)
49 PRK14104 chaperonin GroEL; Pro 100.0 3.9E-35 8.5E-40 329.2 23.8 305 119-510 156-519 (546)
50 TIGR02344 chap_CCT_gamma T-com 100.0 3.2E-36 6.9E-41 338.6 14.3 371 222-628 67-504 (525)
51 TIGR02347 chap_CCT_zeta T-comp 100.0 6.1E-36 1.3E-40 335.5 16.1 364 221-628 66-508 (531)
52 PLN03167 Chaperonin-60 beta su 100.0 7.1E-36 1.5E-40 337.2 14.5 287 157-510 232-575 (600)
53 cd03340 TCP1_eta TCP-1 (CTT or 100.0 1.2E-35 2.6E-40 333.7 15.5 360 222-628 67-502 (522)
54 TIGR02339 thermosome_arch ther 100.0 1.7E-35 3.7E-40 332.2 15.9 361 222-628 67-502 (519)
55 cd03335 TCP1_alpha TCP-1 (CTT 100.0 2.7E-35 5.7E-40 331.1 15.5 372 221-628 58-508 (527)
56 TIGR02345 chap_CCT_eta T-compl 100.0 3.8E-35 8.1E-40 329.4 16.0 360 222-628 68-502 (522)
57 cd03337 TCP1_gamma TCP-1 (CTT 100.0 2.9E-35 6.2E-40 327.2 14.0 336 222-628 67-463 (480)
58 KOG0363|consensus 100.0 1.2E-35 2.6E-40 300.5 8.3 354 222-628 71-501 (527)
59 cd03343 cpn60 cpn60 chaperonin 100.0 8.5E-35 1.8E-39 326.8 15.1 360 222-628 66-499 (517)
60 TIGR02346 chap_CCT_theta T-com 100.0 7.2E-35 1.6E-39 327.3 13.9 370 222-628 69-502 (531)
61 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 4.7E-35 1E-39 325.6 11.4 335 222-628 63-465 (484)
62 TIGR02340 chap_CCT_alpha T-com 100.0 5.6E-34 1.2E-38 320.9 15.2 371 222-628 63-512 (536)
63 cd03338 TCP1_delta TCP-1 (CTT 100.0 4.3E-34 9.2E-39 320.8 13.9 375 222-628 59-498 (515)
64 cd03341 TCP1_theta TCP-1 (CTT 100.0 2E-33 4.4E-38 311.7 11.9 338 222-628 59-454 (472)
65 cd03334 Fab1_TCP TCP-1 like do 100.0 1.7E-31 3.8E-36 273.9 22.5 230 118-397 20-256 (261)
66 COG0459 GroL Chaperonin GroEL 100.0 2.5E-32 5.4E-37 303.0 14.6 369 223-628 63-496 (524)
67 cd00309 chaperonin_type_I_II c 100.0 1E-32 2.2E-37 306.2 11.2 339 222-628 59-448 (464)
68 cd03344 GroEL GroEL_like type 100.0 7.3E-31 1.6E-35 293.6 9.8 129 467-628 375-503 (520)
69 PRK12849 groEL chaperonin GroE 100.0 8.9E-30 1.9E-34 285.7 14.8 129 467-628 377-505 (542)
70 PRK12851 groEL chaperonin GroE 100.0 2.6E-29 5.7E-34 282.1 16.4 354 222-628 62-506 (541)
71 PRK12852 groEL chaperonin GroE 100.0 8.1E-30 1.8E-34 286.9 11.4 130 467-628 378-507 (545)
72 KOG0364|consensus 100.0 7.7E-30 1.7E-34 263.9 9.1 365 220-628 68-503 (527)
73 PRK00013 groEL chaperonin GroE 100.0 1.9E-29 4.1E-34 283.1 12.8 129 468-628 378-506 (542)
74 PRK12850 groEL chaperonin GroE 100.0 2.2E-29 4.7E-34 283.0 12.0 129 467-628 378-506 (544)
75 PTZ00114 Heat shock protein 60 100.0 7.7E-29 1.7E-33 279.4 16.2 131 467-628 390-522 (555)
76 TIGR02348 GroEL chaperonin Gro 100.0 1.1E-28 2.3E-33 276.6 13.8 128 468-628 377-504 (524)
77 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 9.1E-29 2E-33 276.0 10.3 360 222-628 40-466 (485)
78 PRK14104 chaperonin GroEL; Pro 100.0 3.3E-28 7.2E-33 273.3 14.4 349 223-628 67-507 (546)
79 CHL00093 groEL chaperonin GroE 100.0 1.9E-28 4.2E-33 274.9 12.1 129 468-628 378-507 (529)
80 KOG0360|consensus 99.9 3E-29 6.6E-34 261.8 2.0 355 222-628 70-518 (545)
81 cd03333 chaperonin_like chaper 99.9 4.4E-26 9.5E-31 227.0 20.6 199 109-394 10-209 (209)
82 PLN03167 Chaperonin-60 beta su 99.9 5.6E-27 1.2E-31 265.1 12.1 128 470-628 435-563 (600)
83 KOG0359|consensus 99.9 1.6E-27 3.4E-32 246.6 4.8 359 221-628 67-497 (520)
84 KOG0356|consensus 99.9 6.5E-23 1.4E-27 219.1 8.1 376 64-504 84-525 (550)
85 KOG0357|consensus 99.9 7.5E-23 1.6E-27 206.4 3.8 209 374-628 144-378 (400)
86 KOG0230|consensus 99.8 2.9E-19 6.2E-24 208.0 13.7 216 137-397 349-569 (1598)
87 cd03334 Fab1_TCP TCP-1 like do 99.1 4.1E-11 8.8E-16 123.4 4.4 84 2-88 50-133 (261)
88 KOG0356|consensus 98.9 4.2E-09 9.1E-14 114.0 11.4 124 470-627 395-518 (550)
89 cd03333 chaperonin_like chaper 98.6 2.5E-08 5.4E-13 99.4 4.5 72 1-89 45-117 (209)
90 KOG0230|consensus 96.7 0.0013 2.8E-08 79.4 4.0 74 2-78 364-437 (1598)
No 1
>KOG0359|consensus
Probab=100.00 E-value=4.1e-60 Score=486.86 Aligned_cols=321 Identities=54% Similarity=0.850 Sum_probs=296.0
Q ss_pred CceEeecCCCCCCCceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccC--CCCcccCcchhhhHHHhcCchhhh
Q psy14945 1 MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSG--SGPWCATPGHAQVREERAHPDMQH 78 (629)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~--~~~~~~~~~~~~~~~e~~~~~~~~ 78 (629)
|||||+|+|++..||+||+|+|||||+|||+||+++||||||+|||||||||+| +||||++.+
T Consensus 187 mveim~mq~~s~~dT~~v~glvLdhg~rHpdmp~~~e~a~iL~~NvSLEYEK~EinsgffYsta~--------------- 251 (520)
T KOG0359|consen 187 MVEIMEMQHKSLHDTSLVQGLVLDHGARHPDMPRRVEDAYILICNVSLEYEKPEINSGFFYSTAE--------------- 251 (520)
T ss_pred HHHhhhhccCchhhhHHhhhhhccCCCCCcccccchhceEEEEeeccccccccccccchhccchh---------------
Confidence 899999999999999999999999999999999999999999999999999999 677777652
Q ss_pred hhhhcccccccccCCCCCCchhhHHHHhHhhhhcccccchhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEec
Q psy14945 79 QHGIREEGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEY 158 (629)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~ 158 (629)
T Consensus 252 -------------------------------------------------------------------------------- 251 (520)
T KOG0359|consen 252 -------------------------------------------------------------------------------- 251 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccceEEEEeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHh
Q psy14945 159 EKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMD 238 (629)
Q Consensus 159 Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~ 238 (629)
+...+...|+++++
T Consensus 252 ------------------------------------------------------------------ere~L~~~eR~Fi~ 265 (520)
T KOG0359|consen 252 ------------------------------------------------------------------EREVLVLAERKFID 265 (520)
T ss_pred ------------------------------------------------------------------HHHHHHHHHHHHHH
Confidence 23345557778888
Q ss_pred hhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHh
Q psy14945 239 DMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLAC 318 (629)
Q Consensus 239 ~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~t 318 (629)
+. +.+|+|| |. .+|.-.+++||||+|..++.|++.||.+++|.+++.|+|+.++|
T Consensus 266 ~r--------~~kiiel-------------k~----~vc~fvvinqkGidp~sld~~a~~gIlaLRRAKRRNmERL~lac 320 (520)
T KOG0359|consen 266 QR--------VRKIIEL-------------KR----KVCEFVVINQKGIDPTSLDSLAKSGILALRRAKRRNMERLVLAC 320 (520)
T ss_pred HH--------HHHHHHH-------------hh----hcceEEEecccCCCCCcchhhhhcchHHHHHHhhhhHHHHHHhh
Confidence 88 8888853 32 35655578899999999999999999999999999999999999
Q ss_pred CCcccccccccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcc
Q psy14945 319 GGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVV 398 (629)
Q Consensus 319 Gg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV 398 (629)
||..++|+++++++.+|+|+.++++++|+++|+|+++|+++..||||++||+++.+.+++.+++|++.++++++++..++
T Consensus 321 GG~a~nsvddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i 400 (520)
T KOG0359|consen 321 GGEAVNSVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNPSSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGI 400 (520)
T ss_pred ccceecccccCChhhccccceeEEeeccceeeEeeecCCCCcceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCC
Q psy14945 399 PGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVL 478 (629)
Q Consensus 399 ~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~ 478 (629)
||+|++|.++..+|+....+++++.++++++|++||..+|++|++|+|+|..+.+..|...|.. ...|+|+.+|+.+
T Consensus 401 ~Gaga~~va~~~~lr~~k~~vkgra~~g~~afa~all~ipk~La~nsg~D~qe~l~~l~~e~~~---~~~g~dl~~g~~~ 477 (520)
T KOG0359|consen 401 PGAGAFEVALGRHLRESKKSVKGRAYLGVKAFANALLVIPKTLAKNSGLDEQETLVSLKKEHEV---TLRGLDLFRGEEC 477 (520)
T ss_pred cCchHHHHHHHHHHHHhhhccCchhhhhHHHHHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhh---hhcccccccCCcc
Confidence 9999999999999998888899999999999999999999999999999999999999887753 2459999999999
Q ss_pred CCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 479 NPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 479 d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
++...||||.++|+++.|++++-.|++.+.|+
T Consensus 478 ~~~~~gi~Dny~v~~~~l~s~~via~nlLlvD 509 (520)
T KOG0359|consen 478 DPSRKGIYDNYSVKKQLLRSEAVIATNLLLVD 509 (520)
T ss_pred chhhccccchHHHHHHHhhhhHHHHHHHHHHH
Confidence 99999999999999999998888777776665
No 2
>KOG0361|consensus
Probab=100.00 E-value=4.2e-53 Score=429.27 Aligned_cols=365 Identities=22% Similarity=0.317 Sum_probs=332.6
Q ss_pred CCCchhhHHHHhHhhhhccccc--chhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEE
Q psy14945 95 HPDMPKSVKNAHILTCNISMEY--EKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVV 172 (629)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~s~~~--~~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv 172 (629)
....++.+..+. .|+.+|+-. +++.|+...|++|.... +. .++..|.|+|++||++.||.+++|+.
T Consensus 148 ~~~~r~lL~KcA-~T~lsSKlI~~ek~fF~~MvVDAV~~ld-~~----------l~~~mIGIKKV~GG~~~dS~lv~GVA 215 (543)
T KOG0361|consen 148 KTELRELLEKCA-ATALSSKLIRQEKEFFAKMVVDAVLTLD-ND----------LDLNMIGIKKVPGGAMEDSLLVNGVA 215 (543)
T ss_pred hhhHHHHHHHHH-HHHhhhhhhhhhHHHHHHHHHHHHHhhc-cc----------cchhhcceeecCCCccchhhhcccee
Confidence 334455566666 566677766 48899999999998542 11 24567899999999999999999999
Q ss_pred EeccCCCC---CCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHH
Q psy14945 173 LNHGARHP---DMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTV 249 (629)
Q Consensus 173 ~~~~~~~~---~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv 249 (629)
|++.|.+. ..|+++.||||+++|..||.+..+-+. .+.+....++..++..||+.+.+. +
T Consensus 216 FkKtFsYAGfEqqPKk~~NpkIl~LnvELElKaEkdNA---------EiRv~~v~eyQ~iVDAEW~Ii~~K--------L 278 (543)
T KOG0361|consen 216 FKKTFSYAGFEQQPKKFLNPKILLLNVELELKAEKDNA---------EIRVDNVEEYQAIVDAEWNIIYDK--------L 278 (543)
T ss_pred eeehccccchhhCccccCCceEEEEeeeeeecccccCc---------eeecCCHHHHHHHHhHHHHHHHHH--------H
Confidence 99998876 468999999999999999987666665 788999999999999999999998 8
Q ss_pred HHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccccc
Q psy14945 250 LVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGL 329 (629)
Q Consensus 250 ~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l 329 (629)
..+.+ .+. .| +|+.-.|.|.+.+||++++|.+..|++..|+.|+...+||++.++..++
T Consensus 279 ~ki~~-------------sGA----nV----VLSkLpIGD~ATQyFAdrdiFCAGRV~~eDl~Rv~~acGGsi~tt~~~i 337 (543)
T KOG0361|consen 279 DKIHE-------------SGA----NV----VLSKLPIGDLATQYFADRDIFCAGRVPEEDLNRVMQACGGSIQTTVSDI 337 (543)
T ss_pred HHHHh-------------cCC----eE----EEecccchHHHHHHhhccCceecCcCCHHHHHHHHHhcCcchhhhhhhc
Confidence 88873 332 22 5778889999999999999999999999999999999999999999999
Q ss_pred CcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHH
Q psy14945 330 EPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAW 409 (629)
Q Consensus 330 ~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~ 409 (629)
.+..+|.|..|+|++++.++|.+|++|+..+.||++|||+-+.+++|.+|+++||+.++|.++++..||+|||++||.++
T Consensus 338 ~~~~LG~C~~FeE~QvG~eRyN~Fegcp~aktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElS 417 (543)
T KOG0361|consen 338 KEEVLGTCALFEERQVGGERYNLFEGCPKAKTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELS 417 (543)
T ss_pred chhhcchhhhHHHHhhcchhhhhhcCCCccceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchh
Q psy14945 410 HALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNL 489 (629)
Q Consensus 410 ~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~ 489 (629)
++|++|+..+.+++|+.+.+|++|||.||++||+|+|+|..+++.+||..|.. |..|+|++.+++.+.|+.+.+||+|.
T Consensus 418 k~lRd~S~ti~gK~q~~i~A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~-G~~w~Gvdi~~e~i~dn~~~~VwEP~ 496 (543)
T KOG0361|consen 418 KYLRDYSRTIAGKQQLFINAYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQ-GEKWYGVDINTEGIADNFEKFVWEPS 496 (543)
T ss_pred HHHHHhhcccCcHHHHHHHHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhc-CCceeeeeecccchhhHHHhhccChH
Confidence 99999999999999999999999999999999999999999999999999987 78999999999999999999999999
Q ss_pred hHHHHHhhhhhhcCCCCeEEe
Q psy14945 490 TVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 490 ~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.||.+++..|+|+|.....|+
T Consensus 497 ~VK~Nai~aateAa~lIlsvD 517 (543)
T KOG0361|consen 497 IVKINAITAATEAACLILSVD 517 (543)
T ss_pred HHHHHHHHHHHHhhhheEehh
Confidence 999999999999999998887
No 3
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.8e-50 Score=452.69 Aligned_cols=373 Identities=49% Similarity=0.729 Sum_probs=325.4
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+.... .++.+||... .++|+.++++|+....... ...+++++++++++||++.||++++|++|++++
T Consensus 146 ~~l~~ia-~tsl~sK~~~~~~~~ls~iv~~Av~~v~~~~--------~~i~~~~I~i~k~~g~s~~ds~~v~Giv~~~~~ 216 (531)
T TIGR02347 146 ELLLNVA-RTSLRTKLPIDLADQLTEIVVDAVLAIKKDG--------EQIDLFMVEIMEMKHKSATDTTLIRGLVLDHGA 216 (531)
T ss_pred HHHHHHH-HHHhccccchhhHHHHHHHHHHHHHHHhhcC--------CCCChhHeEEEEecCCCccccEEEeeEEEecCc
Confidence 3444444 3555666553 5778888888887531111 013566789999999999999999999999999
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.+|+||++++||||++++++|++++++... .+.+++..++..++..|++++++. +..|.++.+
T Consensus 217 ~~~~~~~~~~n~~Ill~~~~le~~~~~~~~---------~~~~~~~~~~~~~~~~E~~~l~~~--------v~~I~~~~~ 279 (531)
T TIGR02347 217 RHPDMPRRVKNAYILTCNVSLEYEKTEVNS---------GFFYSNAEQREKLVEAERKFVDDR--------VKKIIELKK 279 (531)
T ss_pred CCCCCceeccCceEEEEeCCCCCCccccCc---------eEEEcCHHHHHHHHHHHHHHHHHH--------HHHHHHhcc
Confidence 999999999999999999999999988876 788888999999999999999999 888874321
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCccc
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYA 337 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~ 337 (629)
++ +. ..+++.. .++++++|++.+++||.+++|.+++++++++++|||++|||+++.++..++++.+|+|
T Consensus 280 ~~---~~---~~~~~~~-----lvi~~k~I~~~a~~~L~~~~I~~i~rv~~~~le~ia~~tGa~~i~~l~~~~~~~LG~~ 348 (531)
T TIGR02347 280 KV---CG---KSPDKGF-----VVINQKGIDPPSLDLLAKEGIMALRRAKRRNMERLTLACGGEALNSVEDLTPECLGWA 348 (531)
T ss_pred cc---cc---cCCCccE-----EEEeCCCccHHHHHHHHHCCceEEccCCHHHHHHHHHHhCCEEecccccCCccccccc
Confidence 00 00 0000100 2457999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh
Q psy14945 338 GSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN 417 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~ 417 (629)
+.+++..++++++++|.+|+++..|||+|||+++..++|.+|+++||++++++++++|++|||||++|++++.+|++++.
T Consensus 349 ~~v~~~~ig~~~~~~i~~~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~ 428 (531)
T TIGR02347 349 GLVYETSIGEEKYTFIEEVKNPKSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKEEKK 428 (531)
T ss_pred eEEEEEEECCeEEEEEEcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999899999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhh
Q psy14945 418 TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 497 (629)
Q Consensus 418 ~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~ 497 (629)
.+++.+++++++|++||++||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.+|.+.|+.+.|||||+.+|+++++
T Consensus 429 ~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~-~~~~~Gid~~~g~~~d~~~~gV~Dp~~vk~~al~ 507 (531)
T TIGR02347 429 SVKGKAKLGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDE-GGEVVGVDLETGEPIDPEIKGIWDNYRVKKQLIQ 507 (531)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-cCCceeeeccCCCccchhhccCEEcHHHHHHHHH
Confidence 888899999999999999999999999999999999999988764 4467899999999999999999999999999999
Q ss_pred hhhhcCCCCeEEe
Q psy14945 498 SWIISGLHPRVIT 510 (629)
Q Consensus 498 ~a~e~a~~~~iV~ 510 (629)
.|+++|...+.|+
T Consensus 508 ~A~e~a~~iLrID 520 (531)
T TIGR02347 508 SATVIASQLLLVD 520 (531)
T ss_pred HHHHHHHHHHhHH
Confidence 9999998887776
No 4
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=1.4e-50 Score=454.07 Aligned_cols=360 Identities=30% Similarity=0.453 Sum_probs=321.8
Q ss_pred hhhhccccc---chhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcc
Q psy14945 108 LTCNISMEY---EKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPK 184 (629)
Q Consensus 108 ~~~~~s~~~---~~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~ 184 (629)
.++..|+.. ..+.|+.++++|+..- +... +...-..++++|+|++++||++.||++++|++|++++.+|.||+
T Consensus 152 ~tsl~sk~~~~~~~~~ls~l~~~A~~~v-~~~~---~~g~~~~~~~~I~i~k~~Ggs~~ds~lv~G~vi~~~~~~~~m~~ 227 (519)
T TIGR02339 152 ETSLTGKASAEVTKDKLANLVVEAVKQV-AEKR---GDGKYYVDLDNIKIEKKTGGSIDDTELVEGIVVDKEPVHPGMPK 227 (519)
T ss_pred HhhhccccccchhHHHHHHHHHHHHHHH-hhhc---cCCCcccCHHHeEEEEccCcChhcceeEeeEEEecCCCCCCCcc
Confidence 455567744 3578899988888753 1100 00001246778999999999999999999999999999999999
Q ss_pred cccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHH
Q psy14945 185 SVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIA 264 (629)
Q Consensus 185 ~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~ 264 (629)
+++||||++++++||+++++.+. ++.+++.+++.+++.+|++++++. |..+.
T Consensus 228 ~i~n~kIlll~~~Le~~~~~~~~---------~~~i~~~~~~~~~l~~E~~~i~~~--------v~~i~----------- 279 (519)
T TIGR02339 228 RVKNAKIALLDAPLEVEKTEIDA---------KIRITDPDQIKKFLDQEEAMLKEM--------VDKIA----------- 279 (519)
T ss_pred ccCCCcEEEEeccccccccccce---------EEEECCHHHHHHHHHHHHHHHHHH--------HHHHH-----------
Confidence 99999999999999999998876 788888999999999999999999 88887
Q ss_pred HHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEE
Q psy14945 265 EVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHV 344 (629)
Q Consensus 265 ~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~ 344 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++.+++|||++|||+++++++.+++..+|+|+.+++.+
T Consensus 280 --~~g~----~l----vi~~~~I~~~al~~L~~~gI~~v~~v~~~~L~rIa~~tGa~ii~~~~~l~~~~LG~~~~v~~~~ 349 (519)
T TIGR02339 280 --DAGA----NV----VFCQKGIDDLAQHYLAKAGILAVRRVKKSDIEKLARATGAKIVSSIKEITESDLGYAGLVEERK 349 (519)
T ss_pred --hcCC----cE----EEECCCccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEeCchhhCChhhccCCceEEEEE
Confidence 3443 12 4579999999999999999999999999999999999999999999999888999999999999
Q ss_pred EcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchH
Q psy14945 345 LGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSR 424 (629)
Q Consensus 345 i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k 424 (629)
++++++++|++|..+..+||+|||+++..++|.+|+++||+++++++++++++|||||++|++++.+|++++..+.++++
T Consensus 350 ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~ 429 (519)
T TIGR02339 350 VGDDKMTFVEGCKNPKAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKIGGREQ 429 (519)
T ss_pred ECCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcCCCHHH
Confidence 99999999999988899999999999999999999999999999999999999999999999999999999888888999
Q ss_pred HHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCC
Q psy14945 425 LGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGL 504 (629)
Q Consensus 425 ~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~ 504 (629)
+++++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.+|.+.|+.+.|||||+.||+++++.|+++|.
T Consensus 430 ~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~ 508 (519)
T TIGR02339 430 LAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEK-GNKNAGINVFTGEIEDMLELGVIEPLRVKEQAIKSATEAAT 508 (519)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-cCCceeEEcCCCCccchhhccceEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887753 35679999999999999999999999999999999999988
Q ss_pred CCeEEe
Q psy14945 505 HPRVIT 510 (629)
Q Consensus 505 ~~~iV~ 510 (629)
..+.++
T Consensus 509 ~iL~id 514 (519)
T TIGR02339 509 MILRID 514 (519)
T ss_pred HHHhHh
Confidence 766554
No 5
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=1.9e-50 Score=453.34 Aligned_cols=359 Identities=31% Similarity=0.476 Sum_probs=320.9
Q ss_pred hhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccc
Q psy14945 108 LTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKS 185 (629)
Q Consensus 108 ~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~ 185 (629)
.++..|+... .+.|+.++++|+... +... ......++++++|++++||+++||++++|++|++++.||+||+.
T Consensus 151 ~ts~~sk~~~~~~~~l~~l~~~A~~~v-~~~~----~~~~~~~~~~I~i~k~~Ggs~~ds~lv~G~v~~~~~~~~~m~~~ 225 (517)
T cd03343 151 KTSLTGKGAEAAKDKLADLVVDAVLQV-AEKR----DGKYVVDLDNIKIEKKTGGSVDDTELIRGIVIDKEVVHPGMPKR 225 (517)
T ss_pred HHhhcccchhhHHHHHHHHHHHHHHHh-hhcc----CCCccccHHHeeEEeecCcCHHHcceeeeEEEeccCCCCCCccc
Confidence 3444555554 477899999998753 1110 00012456789999999999999999999999999999999999
Q ss_pred ccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 186 VKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 186 i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
++||||++++++|||++++.+. ++.+++.+++..++.+|++++++. +..+.
T Consensus 226 ~~n~~Illl~~~Le~~k~~~~~---------~~~i~s~~~~~~~~~~E~~~i~~~--------v~~i~------------ 276 (517)
T cd03343 226 VENAKIALLDAPLEVKKTEIDA---------KIRITSPDQLQAFLEQEEAMLKEM--------VDKIA------------ 276 (517)
T ss_pred cCCCcEEEEeccccCCccccce---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH------------
Confidence 9999999999999999998876 788888899999999999999998 88887
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i 345 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++++++|||++|||+++++++.+++..+|+|+.+++.++
T Consensus 277 -~~g~----~l----vi~~~~I~~~al~~l~~~gI~~v~~v~~~~l~~Ia~~tGa~ii~~~~~l~~~~LG~~~~v~~~~i 347 (517)
T cd03343 277 -DTGA----NV----VFCQKGIDDLAQHYLAKAGILAVRRVKKSDMEKLARATGAKIVTNIDDLTPEDLGEAELVEERKV 347 (517)
T ss_pred -hcCC----CE----EEeCCCccHHHHHHHhHCCcEEEEeCCHHHHHHHHHHhCCEEecchhhCChhhCCccceEEEEEE
Confidence 3343 11 46799999999999999999999999999999999999999999999999889999999999999
Q ss_pred cCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHH
Q psy14945 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRL 425 (629)
Q Consensus 346 ~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~ 425 (629)
+++++++|++|+++..|||+|||+++..++|.+++++||++++++++++|++|||||++|++++.+|++++....+++++
T Consensus 348 g~~~~~~~~~~~~~~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~~~~~ 427 (517)
T cd03343 348 GDDKMVFVEGCKNPKAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGGREQL 427 (517)
T ss_pred CCeEEEEEEcCCCCceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCCHHHH
Confidence 99999999989988999999999999999999999999999999999999999999999999999999988888889999
Q ss_pred HHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 426 GIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 426 ~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
++++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.+|.+.|+.+.|||||+.+|+++++.|+++|..
T Consensus 428 ~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~ 506 (517)
T cd03343 428 AVEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEK-GNKNAGLDVYTGEVVDMLEKGVIEPLRVKKQAIKSATEAATM 506 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-cCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987753 356799999999999999999999999999999999999887
Q ss_pred CeEEe
Q psy14945 506 PRVIT 510 (629)
Q Consensus 506 ~~iV~ 510 (629)
.+.++
T Consensus 507 iL~id 511 (517)
T cd03343 507 ILRID 511 (517)
T ss_pred HHhhh
Confidence 76654
No 6
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.7e-50 Score=454.13 Aligned_cols=360 Identities=24% Similarity=0.351 Sum_probs=318.7
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCcccccccc-ceeEEEecCCCccceEEEEeEEEeccCCCCCCccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHIL-TCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKS 185 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~-~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~ 185 (629)
++.+|+..+ .+.|+.++++++..-..... .... ..++. +++|++++||++.||++++|++|+++..++.||++
T Consensus 153 t~l~sk~~~~~~~~ls~l~~~Ai~~v~~~~~---~~~~-~~d~~~~I~i~ki~Gg~~~dS~lv~Gvvi~k~~~~~~m~~~ 228 (525)
T TIGR02344 153 SCIGTKFVSRWSDLMCDLALDAVRTVKRDLG---NGRK-EIDIKRYAKVEKIPGGDIEDSCVLKGVMINKDVTHPKMRRY 228 (525)
T ss_pred HhhccccchhHHHHHHHHHHHHHHHhhcccc---CCCC-ccChhhceEEEEecCCChHhcCcccceEEecccCCCCCccc
Confidence 455676654 57788888888875310000 0000 11222 37899999999999999999999999999999999
Q ss_pred ccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 186 VKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 186 i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
++||||++++++|++++++.+. ++.+++..++.+++.+|++++++. +..+.
T Consensus 229 ~~n~kIlll~~~Le~~~~~~~~---------~i~i~~~~~~~~~l~~E~~~l~~~--------v~~i~------------ 279 (525)
T TIGR02344 229 IENPRIVLLDCPLEYKKGESQT---------NVEIMKEEDWNRILQMEEEYVQLM--------CEDII------------ 279 (525)
T ss_pred cCCCCEEEEecccccccccccc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH------------
Confidence 9999999999999999998876 788888899999999999999998 88887
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcc-cceEEEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGY-AGSVFEHV 344 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~-~~~v~e~~ 344 (629)
..++ .+ +++++++++.+++||.+++|.+++++++.+++|||++|||+++++++.+++..+|+ |+.+++.+
T Consensus 280 -~~~~----~v----Ii~~k~I~dla~~~l~~~~I~av~~v~~~~LerIa~~tGa~ii~~l~~l~~~~lG~~~~~v~~~~ 350 (525)
T TIGR02344 280 -AVKP----DL----VITEKGVSDLAQHYLLKANISAIRRVRKTDNNRIARACGATIVNRPEELRESDVGTGCGLFEVKK 350 (525)
T ss_pred -hcCC----CE----EEeCCCccHHHHHHHhHCCceEEecCCHHHHHHHHHHhCCeEecchhhCCHhhcCCcCCEEEEEE
Confidence 3344 22 46799999999999999999999999999999999999999999999999899999 99999999
Q ss_pred EcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchH
Q psy14945 345 LGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSR 424 (629)
Q Consensus 345 i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k 424 (629)
++++++++|++|+++..|||+|||+++..++|++|+++||+++++++++++.+|||||++|++++.+|++++..+.+.++
T Consensus 351 ig~~~~~~~~g~~~~~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~ 430 (525)
T TIGR02344 351 IGDEYFTFFTECKDPKACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKLEGVQQ 430 (525)
T ss_pred ECCeEEEEEEcCCCCCEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcCCCHHH
Confidence 99999999999998999999999999999999999999999999999999999999999999999999998888888999
Q ss_pred HHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCC
Q psy14945 425 LGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGL 504 (629)
Q Consensus 425 ~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~ 504 (629)
+++++|++||+.||++|++|+|+|+.+++.+|+..|...+..++|+|+.+|.+.|+.+.|||||+.||+++++.|+++|.
T Consensus 431 ~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~ 510 (525)
T TIGR02344 431 WPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGIDGETGKIVDMKEKGIWEPLAVKLQTYKTAIESAC 510 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEECCCCccccchhccceecHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988864224689999999999999999999999999999999999988
Q ss_pred CCeEEe
Q psy14945 505 HPRVIT 510 (629)
Q Consensus 505 ~~~iV~ 510 (629)
..+.++
T Consensus 511 ~iL~id 516 (525)
T TIGR02344 511 MLLRID 516 (525)
T ss_pred HHHhhh
Confidence 876665
No 7
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3.9e-50 Score=450.97 Aligned_cols=363 Identities=24% Similarity=0.311 Sum_probs=320.2
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhc-CCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNH-GARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~-~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
.+..... ++..|+... .+.|+.++++++..-. +.. ...+++.++|++++||++.||++++|++|++++
T Consensus 155 ~l~~ia~-tsl~sk~~~~~~~~~s~i~v~av~~i~~~~~--------~~~d~~~I~i~ki~Ggs~~dS~~v~Givi~~~~ 225 (526)
T cd03339 155 PLIQTAM-TSLGSKIVSRCHRQFAEIAVDAVLSVADLER--------KDVNFELIKVEGKVGGRLEDTKLVKGIVIDKDF 225 (526)
T ss_pred HHHHHHH-HhhcccchhhHHHHHHHHHHHHHHHHhhcCC--------CccchHHeEEEEecCcCHHHcceeeeEEEeccc
Confidence 3444443 344566553 5788999998887421 110 123567899999999999999999999999999
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.|++||+.++||||++++++|++++.+.+. ++.+++..++.+++..|++++... +..+.
T Consensus 226 ~~~~m~~~~~n~kI~ll~~~le~~~~~~~~---------~~~i~s~~~~~~~~~~E~~~i~~~--------v~~i~---- 284 (526)
T cd03339 226 SHPQMPKEVKDAKIAILTCPFEPPKPKTKH---------KLDITSVEDYKKLQEYEQKYFREM--------VEQVK---- 284 (526)
T ss_pred CCCCCCceecCCCEEEEEecccCCccccce---------EEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH----
Confidence 999999999999999999999999887665 677888889999999999999888 88776
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCccc
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYA 337 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~ 337 (629)
..++ . .++++++|++.+++||.+++|.+++++++++++|||++|||+++.+++++++..+|+|
T Consensus 285 ---------~~g~----~----lvi~~~~I~~~al~~L~~~~I~av~~v~~~~LerIa~~tGa~ii~~l~~l~~~~LG~~ 347 (526)
T cd03339 285 ---------DAGA----N----LVICQWGFDDEANHLLLQNGLPAVRWVGGVEIELIAIATGGRIVPRFEDLSPEKLGKA 347 (526)
T ss_pred ---------HCCC----C----EEEeCCCCCHHHHHHHHHCCCEEEEeCCHHHHHHHHHHhCCEEecchhhCChhhcccC
Confidence 3333 1 2467999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcC--eeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 338 GSVFEHVLGE--EKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 338 ~~v~e~~i~~--~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
+.+++..++. +++++|++|+++..+||+|||+++..++|++|+++||+++++++++++++|||||++|++++.+|+++
T Consensus 348 ~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~ 427 (526)
T cd03339 348 GLVREISFGTTKDKMLVIEGCPNSKAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEISCSLAVEKA 427 (526)
T ss_pred ceEEEEEecCCCcEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHHHHHHH
Confidence 9999999885 68889998999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHH
Q psy14945 416 KNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 495 (629)
Q Consensus 416 ~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~ 495 (629)
+....+.+++++++||+||+.||++|++|+|+|+.+++.+|+..|...+..++|+|+.+|.+.|+.+.|||||+.||+++
T Consensus 428 ~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~ 507 (526)
T cd03339 428 ADKCSGIEQYAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQKVFETLISKKQQ 507 (526)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcCceecHHHHHHH
Confidence 88888889999999999999999999999999999999999988854235679999999999999999999999999999
Q ss_pred hhhhhhcCCCCeEEe
Q psy14945 496 INSWIISGLHPRVIT 510 (629)
Q Consensus 496 l~~a~e~a~~~~iV~ 510 (629)
++.|+++|...+.++
T Consensus 508 l~~A~e~a~~iL~iD 522 (526)
T cd03339 508 ILLATQVVKMILKID 522 (526)
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999998776655
No 8
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.3e-49 Score=446.98 Aligned_cols=368 Identities=27% Similarity=0.353 Sum_probs=321.7
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+.+.. .++.+||... .+.|+.++++|+..- +.. + +......++++++|++++||++.||++++|++|++++
T Consensus 138 ~~l~~ia-~tsl~sK~~~~~~~~ls~l~~~A~~~v-~~~--~-~~~~~~~~~~~I~i~~~~Ggs~~~s~li~Givi~~~~ 212 (527)
T cd03335 138 ESLINVA-KTSMSSKIIGADSDFFANMVVDAILAV-KTT--N-EKGKTKYPIKAVNILKAHGKSAKESYLVNGYALNCTR 212 (527)
T ss_pred HHHHHHH-HHHhcccccchhHHHHHHHHHHHHHHh-hcc--c-ccCCCccCHHHeEEEEecCcChhhcceeeeEEEeccc
Confidence 3444444 4555777664 477888888888753 110 0 0011124677899999999999999999999999999
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.++.||++++||||++++++|++++++.+. .+.+++...+..+...|++++++. +..+.
T Consensus 213 ~~~~m~~~i~n~kIlll~~~Le~~~~~~~~---------~~~~~~~~~le~~~~~E~~~l~~~--------i~~i~---- 271 (527)
T cd03335 213 ASQGMPTRVKNAKIACLDFNLQKTKMKLGV---------QVVVTDPEKLEKIRQRESDITKER--------IKKIL---- 271 (527)
T ss_pred CCCCCcccccCCcEEEEeccCCCCccccce---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH----
Confidence 999999999999999999999999888776 677888888899999999999888 77776
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccccc------Cc
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGL------EP 331 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l------~~ 331 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++++++|||++|||++++++..+ ++
T Consensus 272 ---------~~g~----~l----vi~~k~I~d~al~~L~~~~I~~v~~v~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~ 334 (527)
T cd03335 272 ---------AAGA----NV----VLTTGGIDDMCLKYFVEAGAMAVRRVKKEDLRRIAKATGATLVSTLANLEGEETFDP 334 (527)
T ss_pred ---------HcCC----CE----EEeCCCCcHHHHHHHHHCCcEEEEeCCHHHHHHHHHHhCCEEecChhhcCcccccCH
Confidence 3343 12 4679999999999999999999999999999999999999999997544 44
Q ss_pred CCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 332 AHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 332 ~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
..+|+|+.+++.+++++++++|.+|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+
T Consensus 335 ~~LG~~~~v~~~~ig~~~~~~i~g~~~~~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~ 414 (527)
T cd03335 335 SYLGEAEEVVQERIGDDELILIKGTKKRSSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIY 414 (527)
T ss_pred hhCccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCC-------CceEEEEeccCCCCCCCccc
Q psy14945 412 LQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAP-------GVAVGVDVNSGEVLNPTSAG 484 (629)
Q Consensus 412 L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~-------~~~~Gid~~t~~i~d~~e~~ 484 (629)
|++++..+.+++++++++|++||+.||++|++|+|+|+.+++.+|+..|.+.. +.++|+|+.+|.+.|+.+.|
T Consensus 415 L~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~g 494 (527)
T cd03335 415 LENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLINGKVRDNLEAG 494 (527)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCceEeEECCCCcccchhhcc
Confidence 99998888889999999999999999999999999999999999998887521 35789999999999999999
Q ss_pred ccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 485 IYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 485 I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
||||+.+|+++++.|+++|...+.|+
T Consensus 495 V~dp~~~k~~~i~~A~e~a~~iLrID 520 (527)
T cd03335 495 VLEPTVSKIKSLKFATEAAITILRID 520 (527)
T ss_pred ceecHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999998887776
No 9
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=9.3e-50 Score=448.07 Aligned_cols=360 Identities=25% Similarity=0.303 Sum_probs=319.9
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+.... .|+.+|+... .+.|+.++++++..-.. ..+++.+++++++||++.||++++|+++++++
T Consensus 159 ~~l~~va-~t~l~sk~~~~~~~~l~~i~~~av~~i~~-----------~~~~~~I~i~ki~Ggsi~ds~lv~G~v~~~~~ 226 (533)
T PTZ00212 159 EDLLNIA-RTTLSSKLLTVEKDHFAKLAVDAVLRLKG-----------SGNLDYIQIIKKPGGTLRDSYLEDGFILEKKI 226 (533)
T ss_pred HHHHHHH-HHHhcccccchhHHHHHHHHHHHHHHHhc-----------cCCccceEEEEecCcCccccEEEEeEEEeccc
Confidence 3444443 3455777553 57899999988875311 12467799999999999999999999999987
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.+ .||++++||||++++++||+++++.+.. ++.+++.+++..+...|++++++. +..|.
T Consensus 227 ~~-~~~~~i~n~kIll~~~~Le~~k~~~~~~--------~~~i~~~~~~~~l~~~E~~~i~~~--------v~~Ii---- 285 (533)
T PTZ00212 227 GV-GQPKRLENCKILVANTPMDTDKIKIYGA--------KVKVDSMEKVAEIEAAEKEKMKNK--------VDKIL---- 285 (533)
T ss_pred CC-CCCccccCCcEEEEeCCCCCCcccccCc--------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH----
Confidence 65 5899999999999999999999987331 677778888999999999998888 88887
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCccc
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYA 337 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~ 337 (629)
..++ .+ ++++++|++.++++|.+++|.+++++++++++||+++|||+++++++.+++..+|+|
T Consensus 286 ---------~~gv----~v----vv~~~~I~d~a~~~L~~~~I~avr~v~~~~l~rIa~~tGa~iis~l~~~~~~~LG~~ 348 (533)
T PTZ00212 286 ---------AHGC----NV----FINRQLIYNYPEQLFAEAGIMAIEHADFDGMERLAAALGAEIVSTFDTPEKVKLGHC 348 (533)
T ss_pred ---------hcCC----eE----EEeCCCccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEeecCCCCCHHHccCC
Confidence 3343 22 457999999999999999999999999999999999999999999999998999999
Q ss_pred ceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh
Q psy14945 338 GSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN 417 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~ 417 (629)
+.+++..++++++++|++|..+..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.
T Consensus 349 ~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~ 428 (533)
T PTZ00212 349 DLIEEIMIGEDKLIRFSGCAKGEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAK 428 (533)
T ss_pred ceEEEEEECCeEEEEEEccCCCCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhh
Q psy14945 418 TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 497 (629)
Q Consensus 418 ~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~ 497 (629)
...+++++++++|++||+.||++|++|+|+|+.+++.+|+..|.. +..++|+|+.+|.+.|+.+.|||||+.||+++++
T Consensus 429 ~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~-~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~ 507 (533)
T PTZ00212 429 KVEGKKSLAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYK-GNKTAGIDMEKGTVGDMKELGITESYKVKLSQLC 507 (533)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCCccceeccCCcccchhhccceecHHHHHHHHH
Confidence 888899999999999999999999999999999999999988864 4567999999999999999999999999999999
Q ss_pred hhhhcCCCCeEEe
Q psy14945 498 SWIISGLHPRVIT 510 (629)
Q Consensus 498 ~a~e~a~~~~iV~ 510 (629)
.|+++|...+.++
T Consensus 508 ~A~e~a~~iL~id 520 (533)
T PTZ00212 508 SATEAAEMILRVD 520 (533)
T ss_pred HHHHHHHHHHhhh
Confidence 9999998877765
No 10
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.2e-49 Score=445.83 Aligned_cols=359 Identities=25% Similarity=0.308 Sum_probs=319.8
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+.+.. .|+.+|+... .++|+.++++|+..- +. ..+++++++++++|++++||++++|++++++.
T Consensus 147 ~~l~~ia-~t~lssk~~~~~~~~l~~l~~~A~~~v-~~----------~~~~~~i~i~ki~G~s~~ds~l~~G~v~~~~~ 214 (517)
T cd03336 147 EDLLNIA-RTTLSSKILTQDKEHFAELAVDAVLRL-KG----------SGNLDAIQIIKKLGGSLKDSYLDEGFLLDKKI 214 (517)
T ss_pred HHHHHHH-HhhccccccchhHHHHHHHHHHHHHHh-hc----------cCCccceeEEEccCCCccceEEEeeEEEeccc
Confidence 3444444 3556777653 578999999998753 11 12457899999999999999999999999987
Q ss_pred CCCCCcccccCeeEEEeecccccccccc-CCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHH
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQ-GGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELL 256 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~-~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL 256 (629)
.+ .||++++||||++++++|++++++. +. ++.+++.+++..+...|++++.+. +..|.
T Consensus 215 ~~-~~~~~~~n~kIli~~~~le~~~~~~~~~---------~~~~~~~~~~~~l~~~E~~~~~~~--------v~~I~--- 273 (517)
T cd03336 215 GV-NQPKRIENAKILIANTPMDTDKIKIFGA---------KVRVDSTAKVAEIEEAEKEKMKNK--------VEKIL--- 273 (517)
T ss_pred CC-CCCCeeccccEEEEecCCCcccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH---
Confidence 65 4899999999999999999999887 44 677888888988999999988888 88887
Q ss_pred hhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcc
Q psy14945 257 KQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGY 336 (629)
Q Consensus 257 ~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~ 336 (629)
..++ .+ ++++++|++.+++||++++|.+++++++++++||+++|||+++++++.+++..+|+
T Consensus 274 ----------~~gv----~~----v~~~~~I~~~~~~~l~~~~I~av~~v~~~~L~rIa~~tGa~ii~~l~~~~~~~LG~ 335 (517)
T cd03336 274 ----------KHGI----NC----FINRQLIYNYPEQLFADAGIMAIEHADFDGVERLALVTGGEIASTFDHPELVKLGT 335 (517)
T ss_pred ----------hcCC----eE----EEeCCCccHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCEEecccCCCCcccccc
Confidence 3343 11 45799999999999999999999999999999999999999999999999889999
Q ss_pred cceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhh
Q psy14945 337 AGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYK 416 (629)
Q Consensus 337 ~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~ 416 (629)
|+.+++..++++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++
T Consensus 336 ~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~ 415 (517)
T cd03336 336 CKLIEEIMIGEDKLIRFSGVAAGEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELA 415 (517)
T ss_pred cceEEEEEECCeEEEEEEccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHh
Q psy14945 417 NTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 496 (629)
Q Consensus 417 ~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l 496 (629)
.++.+++++++++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.+|.+.|+.+.|||||+.||++++
T Consensus 416 ~~~~~~~~~~i~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l 494 (517)
T cd03336 416 KKTPGKKSLAIEAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYN-GNTTAGLDMRKGTVGDMKELGITESFKVKRQVL 494 (517)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCCceeeecCCCCccchhhcCceecHHHHHHHH
Confidence 8888999999999999999999999999999999999999988864 456799999999999999999999999999999
Q ss_pred hhhhhcCCCCeEEe
Q psy14945 497 NSWIISGLHPRVIT 510 (629)
Q Consensus 497 ~~a~e~a~~~~iV~ 510 (629)
+.|+++|...+.++
T Consensus 495 ~~A~e~a~~iL~id 508 (517)
T cd03336 495 LSASEAAEMILRVD 508 (517)
T ss_pred HHHHHHHHHHHhHh
Confidence 99999988776665
No 11
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.6e-49 Score=445.85 Aligned_cols=363 Identities=24% Similarity=0.304 Sum_probs=320.0
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhc-CCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNH-GARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~-~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
.+..... ++..|+... .+.|+.++++++..-. +. ....++++++|++++||++.||++++|++|++++
T Consensus 159 ~l~~ia~-t~l~sK~~~~~~~~ls~i~~~av~~i~~~~--------~~~~d~~~I~i~ki~Ggs~~ds~~v~Gi~i~~~~ 229 (532)
T TIGR02343 159 PLIQAAK-TSLGSKIVSKCHRRFAEIAVDAVLMVADME--------RRDVDFDLIKVEGKVGGSLEDTKLIKGIIIDKDF 229 (532)
T ss_pred HHHHHHH-HhhccchhhHHHHHHHHHHHHHHHhhhhcC--------CCcCCHHHeeEEEecCCCcccceeEeeEEEecCc
Confidence 3444443 344566443 5778888888887421 11 0134678999999999999999999999999999
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.+++||+.++||||++++++|++++++.+. ++.+++..++.++...|++++... +..+.
T Consensus 230 ~~~~m~~~~~n~kI~l~~~~le~~~~~~~~---------~~~i~~~~~~~~~~~~E~~~l~~~--------l~~i~---- 288 (532)
T TIGR02343 230 SHPQMPKEVKDAKIAILTCPFEPPKPKTKH---------KLDISSVEEYKKLQKYEQQKFAEM--------IDDIK---- 288 (532)
T ss_pred CCCCCCeeecCCcEEEEEeeccccccccce---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH----
Confidence 999999999999999999999999998765 677888889999999999998888 77776
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCccc
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYA 337 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~ 337 (629)
..+. . .++++++|++.+++||.+++|.+++++++++++|||++|||+++++++.+++..+|+|
T Consensus 289 ---------~~g~----~----lvi~~~~I~~~al~~L~~~~i~~v~~~~~~~l~~Ia~~tGa~~i~~l~~~~~~~LG~a 351 (532)
T TIGR02343 289 ---------KSGA----N----IVICQWGFDDEANHLLLQNDLPAVRWVGGHELELIAIATGGRIVPRFEELSEDKLGKA 351 (532)
T ss_pred ---------HcCC----C----EEEeCCCccHHHHHHHHHCCcEEEEcCCHHHHHHHHHHhCCEEecccccCCHhHCccc
Confidence 3332 1 1457999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcC--eeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 338 GSVFEHVLGE--EKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 338 ~~v~e~~i~~--~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
+.+++.++++ .+++++++|+++..+||+|||+++..++|.+|+++||+++++++++++.+|||||++|++++.+|+++
T Consensus 352 ~~v~~~~ig~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~~ls~~l~~~ 431 (532)
T TIGR02343 352 GLVREISFGTTKDRMLVIEQCKNSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEISCSLAVSQE 431 (532)
T ss_pred ceEEEEEecCCcceEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHH
Confidence 9999999987 47889988998999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHH
Q psy14945 416 KNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 495 (629)
Q Consensus 416 ~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~ 495 (629)
+..+.+.+++++++|++||+.||++|++|+|+|+.+++.+|+..|...+..++|+|+.++.+.|+.+.|||||+.||+++
T Consensus 432 ~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~Dp~~vk~~a 511 (532)
T TIGR02343 432 ADKYSGVEQYAIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKEQGVFETLIGKKQQ 511 (532)
T ss_pred hccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchhccCeecHHHHHHH
Confidence 88888889999999999999999999999999999999999988764234678999999999999999999999999999
Q ss_pred hhhhhhcCCCCeEEe
Q psy14945 496 INSWIISGLHPRVIT 510 (629)
Q Consensus 496 l~~a~e~a~~~~iV~ 510 (629)
++.|+++|...+.++
T Consensus 512 l~~A~e~a~~iL~id 526 (532)
T TIGR02343 512 IQLATQLVRMILKID 526 (532)
T ss_pred HHHHHHHHHHHHhHh
Confidence 999999988766554
No 12
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.4e-49 Score=442.38 Aligned_cols=360 Identities=23% Similarity=0.311 Sum_probs=320.2
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+.... .+..+||... .++|+.++++|+... +. ..++++++|++++||++.||++++|++|++++
T Consensus 149 ~~l~~ia-~t~l~sK~~~~~~~~l~~l~~~A~~~v-~~----------~~~~~~I~i~~i~Ggs~~ds~lv~Giv~~k~~ 216 (522)
T cd03340 149 ELLEKCA-ATALNSKLIASEKEFFAKMVVDAVLSL-DD----------DLDLDMIGIKKVPGGSLEDSQLVNGVAFKKTF 216 (522)
T ss_pred HHHHHHH-HHHhccCcchhHHHHHHHHHHHHHHHh-cc----------cCChhHheEeeecCCChhhceeeeeEEEeccc
Confidence 3344444 3455667554 578999999999854 11 12467899999999999999999999999999
Q ss_pred CCCC---CcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHH
Q psy14945 178 RHPD---MPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGE 254 (629)
Q Consensus 178 ~~~~---m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~e 254 (629)
.+|+ ||++++||||++++++|++++++.+. .+.+++..++..++..|++++.+. +..+.
T Consensus 217 ~~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~---------~i~i~~~~~~~~~~~~E~~~l~~~--------v~~i~- 278 (522)
T cd03340 217 SYAGFEQQPKKFKNPKILLLNVELELKAEKDNA---------EVRVEDPEEYQAIVDAEWKIIYDK--------LEKIV- 278 (522)
T ss_pred CccccccCCccccCCeEEEEeCCCCCCccccce---------EEEECCHHHHHHHHHHHHHHHHHH--------HHHHH-
Confidence 9886 58999999999999999998887665 677777778888889999888888 77776
Q ss_pred HHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCC
Q psy14945 255 LLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHL 334 (629)
Q Consensus 255 lL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~l 334 (629)
..++ .+ ++++++|+|.+++||.+++|.+++++++.+++|||++|||+++.+++.+++..+
T Consensus 279 ------------~~g~----~v----vl~~~~i~d~a~~~l~~~~I~~~~~v~~~~l~rIa~~tGa~ii~~l~~l~~~~L 338 (522)
T cd03340 279 ------------KSGA----NV----VLSKLPIGDLATQYFADRDIFCAGRVPEEDLKRVAQATGGSIQTTVSNITDDVL 338 (522)
T ss_pred ------------hcCC----CE----EEeCCCCcHHHHHHHHHCCcEEEEeCCHHHHHHHHHHHCCEEeeccccCCcccc
Confidence 3343 22 457999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHh
Q psy14945 335 GYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQN 414 (629)
Q Consensus 335 G~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~ 414 (629)
|+|+.+++.++++++|++|++|+.+..+|+++||+++..++|.+|+++||+++++++++++++|||||++|++++.+|++
T Consensus 339 G~~~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~ 418 (522)
T cd03340 339 GTCGLFEERQVGGERYNIFTGCPKAKTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRD 418 (522)
T ss_pred ccceEEEEEEECCEEEEEEECCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCC-ceEEEEeccCCCCCCCcccccchhhHHH
Q psy14945 415 YKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPG-VAVGVDVNSGEVLNPTSAGIYDNLTVKR 493 (629)
Q Consensus 415 ~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~-~~~Gid~~t~~i~d~~e~~I~D~~~Vk~ 493 (629)
++....+++++++++||+||+.||++|++|+|+|+.+++.+|+..|.. ++ .++|+|+.+|.+.|+.+.|||||+.||+
T Consensus 419 ~~~~~~~~~~~~~~~fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~ 497 (522)
T cd03340 419 YSRTIAGKQQLVINAFAKALEIIPRQLCDNAGFDATDILNKLRQKHAQ-GGGKWYGVDINNEGIADNFEAFVWEPSLVKI 497 (522)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCCCeeeeeCCCCcccchhhcCceEcHHHHH
Confidence 987788899999999999999999999999999999999999988875 34 6899999999999999999999999999
Q ss_pred HHhhhhhhcCCCCeEEe
Q psy14945 494 QIINSWIISGLHPRVIT 510 (629)
Q Consensus 494 ~~l~~a~e~a~~~~iV~ 510 (629)
++++.|+++|...+.++
T Consensus 498 ~~i~~A~e~a~~iL~id 514 (522)
T cd03340 498 NALTAATEAACLILSVD 514 (522)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 99999999988776665
No 13
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.1e-48 Score=438.08 Aligned_cols=363 Identities=19% Similarity=0.242 Sum_probs=319.4
Q ss_pred HHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCC
Q psy14945 102 VKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARH 179 (629)
Q Consensus 102 ~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~ 179 (629)
+.... .++..|+... .+.|+.++++++...... ...+..++++++|+++.||++.||++++|++|++++.+
T Consensus 140 l~~va-~tsl~sK~~~~~~~~ls~l~~~a~~~v~~~------~~~~~~~~~~i~i~k~~Ggs~~ds~li~Givl~k~~~~ 212 (517)
T TIGR02342 140 LIKSA-TTSLSSKVVSQYSSLLAPLAVDAVLKVIDP------ENDKNVDLNDIKVVKKLGGTIDDTELIEGLVFTQKASR 212 (517)
T ss_pred HHHHH-HHHhccccchhHHHHHHHHHHHHHHHHhcc------ccCCccCHHHeeEEeccCCChhhcEEEeeEEEeccccc
Confidence 44444 3444577663 677889988888753211 01123467889999999999999999999999999998
Q ss_pred -CCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhh
Q psy14945 180 -PDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQ 258 (629)
Q Consensus 180 -~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~ 258 (629)
++||++++||||++++|+|++++++... .+.+.+..++..++..|++++... +..+.
T Consensus 213 ~~~mpk~i~n~kI~ll~~~Le~~~~~~~~---------~~~~~~~~~~~~~~~~E~~~l~~~--------v~~i~----- 270 (517)
T TIGR02342 213 SAGGPTRIEKAKIGLIQFQISPPKTDMEN---------QVIVNDYAQMDRVLKEERKYILNI--------VKKIK----- 270 (517)
T ss_pred cCCCCccccCCcEEEEecCCCCCcccccc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-----
Confidence 4899999999999999999999888776 677777788999999999888888 77776
Q ss_pred hHHHHHHHhhccccccCccccccccccCC-----CHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCC
Q psy14945 259 ADIYIAEVNLKMHKFAPDCSTSDRYRTGI-----DPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAH 333 (629)
Q Consensus 259 Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i-----~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~ 333 (629)
..++ .+ ++++++| ++.+++||.+++|.+++++++++++|||++|||+++++++.+++..
T Consensus 271 --------~~g~----~l----vi~~~~I~~~~l~~l~~~~l~~~~I~av~~v~~~~LerIa~~tGa~ii~~~~~l~~~~ 334 (517)
T TIGR02342 271 --------KTGC----NV----LLIQKSILRDAVNDLALHFLAKMKIMVVKDIEREEVEFICKTIGCKPIASIDHFTADK 334 (517)
T ss_pred --------hcCC----CE----EEECCCcccccccHHHHHHHhhCCceEEecCCHHHHHHHHHHHCCEEEcchhhcCccc
Confidence 3333 11 3467777 9999999999999999999999999999999999999999999899
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCC-ccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNP-QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHAL 412 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~-~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L 412 (629)
+|+|+.+++.++++.+++++.+|+++ ..+||+|||+++..++|.+|+++||+++++++++++.+|||||++|++++.+|
T Consensus 335 LG~~~~v~~~~~~~~~~~~i~~~~~~~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l 414 (517)
T TIGR02342 335 LGSAELVEEVTTDGGKIIKITGIQNAGKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKL 414 (517)
T ss_pred CcCCceEEEEEECCeEEEEEEccCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHH
Confidence 99999999999999999999888874 89999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHH
Q psy14945 413 QNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVK 492 (629)
Q Consensus 413 ~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk 492 (629)
++++....+.+++++++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.+|.+.|+.+.|||||+.||
T Consensus 415 ~~~~~~~~~~~~~~i~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~i~d~~~~gI~dp~~vk 493 (517)
T TIGR02342 415 SKLARTMKGVESYCVRAFADALEVIPYTLAENAGLNPIDVVTELRNRHAN-GEKYAGISVRKGGITDMLEEEVLQPLLVT 493 (517)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-CCCccceecCCCCccchhhccceEcHHHH
Confidence 99988888899999999999999999999999999999999999988864 45689999999999999999999999999
Q ss_pred HHHhhhhhhcCCCCeEEe
Q psy14945 493 RQIINSWIISGLHPRVIT 510 (629)
Q Consensus 493 ~~~l~~a~e~a~~~~iV~ 510 (629)
+++++.|+++|...+.|+
T Consensus 494 ~~ai~~A~e~a~~iL~iD 511 (517)
T TIGR02342 494 TSAVTLASETVRMILKID 511 (517)
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999998877765
No 14
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=4.6e-48 Score=434.93 Aligned_cols=367 Identities=25% Similarity=0.355 Sum_probs=317.6
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGAR 178 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~ 178 (629)
.+.+.. .++.+||... .+.|+.++++|+..- +... +......+++++++++++||++.||++++|++|++++.
T Consensus 143 ~l~~va-~tsl~sK~~~~~~~~ls~l~~~A~~~v-~~~~---~~g~~~~~~~~I~i~k~~G~s~~~s~~i~Gi~i~~~~~ 217 (536)
T TIGR02340 143 ALINVA-KTSMSSKIIGLDSDFFSNIVVDAVLAV-KMTN---ENGETKYPIKAVNILKAHGGSARESYLVKGYALNCTRA 217 (536)
T ss_pred HHHHHH-HHHhccccchhhHHHHHHHHHHHHHHH-hccc---ccCccccchHHeEEEEecCCCccccEEEEEEEEecccC
Confidence 343333 3455666553 467888888888753 1100 01111246788999999999999999999999999999
Q ss_pred CCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhh
Q psy14945 179 HPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQ 258 (629)
Q Consensus 179 ~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~ 258 (629)
++.||++++||||++++++|++++++.+. ++.+++...+..+...|++++.+. +..|.
T Consensus 218 ~~~m~~~~~n~kIli~~~~L~~~~~~~~~---------~~~~~~~~~le~~~~~E~~~i~~~--------i~~I~----- 275 (536)
T TIGR02340 218 SQQMPKRIKKAKIACLDFNLQKQKMALGV---------QIVVDDPAKLEGIRQREADITKER--------IKKIL----- 275 (536)
T ss_pred CCCCcceecCCcEEEEecCCCCCcccCce---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-----
Confidence 99999999999999999999999888765 788888888999998888888777 77776
Q ss_pred hHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccc------cCcC
Q psy14945 259 ADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEG------LEPA 332 (629)
Q Consensus 259 Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~------l~~~ 332 (629)
..++ .+ +++++++++.+++||.+++|.+++++++++++|||++|||++++++.. +++.
T Consensus 276 --------~~g~----~l----vi~~k~I~~~a~~~L~k~~I~~i~rv~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~ 339 (536)
T TIGR02340 276 --------KAGA----NV----VLTTGGIDDMCLKYFVEAGAMGVRRCKKEDLKRIAKATGGTLVSTLADLEGEETFDAS 339 (536)
T ss_pred --------HcCC----CE----EEeCCCCcHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCEEecchhhcCcccccccc
Confidence 3333 11 457999999999999999999999999999999999999999999754 3455
Q ss_pred CCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHH
Q psy14945 333 HLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHAL 412 (629)
Q Consensus 333 ~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L 412 (629)
.+|+|+.+++.+++++++++|++|+.+..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|
T Consensus 340 ~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l 419 (536)
T TIGR02340 340 YLGFADEVVEERIADDECILIKGTKGRKSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYL 419 (536)
T ss_pred ccccCceEEEEEECCeEEEEEEcCCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHH
Confidence 69999999999999999999998988899999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCC-------CCceEEEEeccCCCCCCCcccc
Q psy14945 413 QNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEA-------PGVAVGVDVNSGEVLNPTSAGI 485 (629)
Q Consensus 413 ~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~-------~~~~~Gid~~t~~i~d~~e~~I 485 (629)
++++..+.+++++++++|++||+.||++|++|+|+|+.+++.+|+..|.+. +..++|+|+.++.+.|+.+.||
T Consensus 420 ~~~~~~~~~~~~~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gI 499 (536)
T TIGR02340 420 ENFATTLGSREQLAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHLKWYGLDLSNGKIRDNKEAGV 499 (536)
T ss_pred HHHhhhCCChhHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCcccccccCceEeEEccCCccccchhccc
Confidence 988877888899999999999999999999999999999999999887652 1347899999999999999999
Q ss_pred cchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 486 YDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 486 ~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
|||+.+|+++++.|+++|...+.++
T Consensus 500 ~Dp~~~k~~~l~~A~e~a~~iL~ID 524 (536)
T TIGR02340 500 LEPAVSKVKSLKFATEAAITILRID 524 (536)
T ss_pred eecHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988877765
No 15
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4e-48 Score=434.12 Aligned_cols=358 Identities=22% Similarity=0.261 Sum_probs=315.6
Q ss_pred hhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCC-Ccc
Q psy14945 108 LTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPD-MPK 184 (629)
Q Consensus 108 ~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~-m~~ 184 (629)
.++..||... .++++.++++|+... |... .....++++++|++++||+++||++++|++|++++.+++ ||+
T Consensus 144 ~ts~~sK~~~~~~~~ls~li~~A~~~v-~~~~-----~~~~~d~~~i~i~~~~Ggs~~ds~lv~Giv~~k~~~~~~~~p~ 217 (515)
T cd03338 144 TTSLNSKVVSQYSSLLAPIAVDAVLKV-IDPA-----TATNVDLKDIRIVKKLGGTIEDTELVDGLVFTQKASKKAGGPT 217 (515)
T ss_pred HHHhccccchhhHHHHHHHHHHHHHHh-hccc-----ccCcCCHHHeEEEEecCCChhhceeeeeEEEeccccCcCCCCc
Confidence 3444566553 466888888888753 2100 001345788999999999999999999999999999987 499
Q ss_pred cccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHH
Q psy14945 185 SVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIA 264 (629)
Q Consensus 185 ~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~ 264 (629)
.++||||++++|+|++++++... .+.+++..++..++.+|++++... +..+.
T Consensus 218 ~i~n~ki~ll~~~le~~~~~~~~---------~~~i~~~~~~~~~~~~E~~~i~~~--------v~~i~----------- 269 (515)
T cd03338 218 RIEKAKIGLIQFCLSPPKTDMDN---------NIVVNDYAQMDRILREERKYILNM--------CKKIK----------- 269 (515)
T ss_pred cccCCcEEEEeccccccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-----------
Confidence 99999999999999999888776 566777778999999999888888 77776
Q ss_pred HHhhccccccCccccccccccCC-----CHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccce
Q psy14945 265 EVNLKMHKFAPDCSTSDRYRTGI-----DPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGS 339 (629)
Q Consensus 265 ~~~~~~~~~l~v~~~~~l~~k~i-----~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~ 339 (629)
..++ .+ ++++++| ++.+.+||.+++|.+++++++.+++|||++|||+++++++.++...+|+|+.
T Consensus 270 --~~g~----~l----vi~~~~i~~~~v~~l~~~~l~~~~I~av~~~~~~~LerIa~~tGa~ii~sl~~l~~~~LG~~~~ 339 (515)
T cd03338 270 --KSGC----NV----LLIQKSILRDAVSDLALHFLAKLKIMVVKDIEREEIEFICKTIGCKPVASIDHFTEDKLGSADL 339 (515)
T ss_pred --hcCC----CE----EEECCCcccccccHHHHHHHHHCCceEEecCCHHHHHHHHHHHCCEEecccccCCHhhCCCCce
Confidence 3343 11 3457765 8999999999999999999999999999999999999999999889999999
Q ss_pred EEEEEEcCeeEEEEeecCC-CccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhh
Q psy14945 340 VFEHVLGEEKFTFVEECKN-PQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNT 418 (629)
Q Consensus 340 v~e~~i~~~~~~~~~~~~~-~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~ 418 (629)
+++.++++.++++|.+|++ +..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++..
T Consensus 340 v~~~~~g~~~~~~i~~~~~~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~ 419 (515)
T cd03338 340 VEEVSLGDGKIVKITGVKNPGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWART 419 (515)
T ss_pred EEEEEECCeEEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhcc
Confidence 9999999999999998887 689999999999999999999999999999999999999999999999999999998877
Q ss_pred cCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhh
Q psy14945 419 VKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498 (629)
Q Consensus 419 i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~ 498 (629)
..+.+++++++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.++.+.|+.+.||+||+.+|+++++.
T Consensus 420 ~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~ 498 (515)
T cd03338 420 LTGVEQYCVRAFADALEVIPYTLAENAGLNPISIVTELRNRHAQ-GEKNAGINVRKGAITNILEENVVQPLLVSTSAITL 498 (515)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-cCCccceeccCCCccchhhcCceecHHHHHHHHHH
Confidence 88889999999999999999999999999999999999988864 45689999999999999999999999999999999
Q ss_pred hhhcCCCCeEEe
Q psy14945 499 WIISGLHPRVIT 510 (629)
Q Consensus 499 a~e~a~~~~iV~ 510 (629)
|+++|...+.|+
T Consensus 499 A~~~a~~iL~ID 510 (515)
T cd03338 499 ATETVRMILKID 510 (515)
T ss_pred HHHHHHHHhccc
Confidence 999998877765
No 16
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.2e-48 Score=432.38 Aligned_cols=359 Identities=25% Similarity=0.325 Sum_probs=315.2
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+..... ++.+|+... .+.|+.++++++..-... .+++++++.+++|++++||++++|+++++.+
T Consensus 148 ~~L~~ia~-t~l~ski~~~~~~~~s~l~~~av~~i~~~-----------~~~~~i~i~k~~G~s~~~s~l~~G~v~~~~~ 215 (519)
T TIGR02341 148 DDLLNIAR-TTLSSKILSQHKDHFAQLAVDAVLRLKGS-----------GNLDAIQIIKKLGGSLNDSYLDEGFLLEKKI 215 (519)
T ss_pred HHHHHHHH-HHhhhhhhhhHHHHHHHHHHHHHHHhccC-----------CChhheEEEEccCCCcccceEEeeEEEeccC
Confidence 34444443 333456553 577888888888752111 1356799999999999999999999999987
Q ss_pred CCCCCcccccCeeEEEeecccccccccc-CCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHH
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQ-GGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELL 256 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~-~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL 256 (629)
.+ .||++++||+|++++++|++++++. +. ++.+++...+..+...|++.+.+. +..|.
T Consensus 216 ~~-~~~~~~~n~~Ili~~~~Le~~~~~~~~~---------~~~~~~~~~~~~l~~~e~~~~~~~--------~~~I~--- 274 (519)
T TIGR02341 216 GV-NQPKRIENAKILIANTPMDTDKVKVFGS---------RVRVDSTAKVAELEAAEKEKMKEK--------VEKIL--- 274 (519)
T ss_pred CC-CCceeeccccEEEEecCCCCCccccCCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH---
Confidence 65 6899999999999999999998886 44 677776677888999999888887 77776
Q ss_pred hhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcc
Q psy14945 257 KQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGY 336 (629)
Q Consensus 257 ~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~ 336 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++.+++||+++|||+++++++.+++..+|+
T Consensus 275 ----------~~g~----~~----v~~~~~I~~~~~~~l~~~~I~~v~~~~~~~l~~ia~~tGa~ii~~~~~~~~~~lG~ 336 (519)
T TIGR02341 275 ----------KHNI----NC----FINRQLIYNYPEQLFADAGVMAIEHADFEGIERLALVTGGEIVSTFDHPELVKLGS 336 (519)
T ss_pred ----------HcCC----cE----EEECCcCCHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCEEecccccCCcccccc
Confidence 3343 11 45799999999999999999999999999999999999999999999999889999
Q ss_pred cceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhh
Q psy14945 337 AGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYK 416 (629)
Q Consensus 337 ~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~ 416 (629)
|+.+++..++++++++|++|+.+..|||+|||+++..++|.+|+++||+++++++++++.+|||||++|++++.+|++++
T Consensus 337 ~~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~ 416 (519)
T TIGR02341 337 CDLIEEIMIGEDKLLKFSGVKLGEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEA 416 (519)
T ss_pred CceEEEEEECCEEEEEEEcCCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999988
Q ss_pred hhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHh
Q psy14945 417 NTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 496 (629)
Q Consensus 417 ~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l 496 (629)
....+++++++++|++||+.||++|++|+|+|+.+++.+|+..|.. +..++|+|+.+|++.|+.+.|||||+.||++++
T Consensus 417 ~~~~~~~~~~i~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l 495 (519)
T TIGR02341 417 QKVPGKEALAVEAFARALRQLPTIIADNAGFDSAELVAQLRAAHYN-GNHTMGLDMEEGEIADMRKLGIIESYKVKRAVV 495 (519)
T ss_pred hcCCChHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-CCCccceecCCCcccchhhccceEcHHHHHHHH
Confidence 8888899999999999999999999999999999999999988864 456789999999999999999999999999999
Q ss_pred hhhhhcCCCCeEEe
Q psy14945 497 NSWIISGLHPRVIT 510 (629)
Q Consensus 497 ~~a~e~a~~~~iV~ 510 (629)
+.|+++|...+.++
T Consensus 496 ~~A~e~a~~iL~id 509 (519)
T TIGR02341 496 SSAAEAAEVILRVD 509 (519)
T ss_pred HHHHHHHHHHHhHH
Confidence 99999988876665
No 17
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.6e-48 Score=432.38 Aligned_cols=360 Identities=21% Similarity=0.312 Sum_probs=319.4
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGAR 178 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~ 178 (629)
.+.... .++..||... .++|+.++++|+..- +.. ..+++.++|++++||++.||++++|++|++++.
T Consensus 150 ~l~~va-~tsl~sK~~~~~~~~l~~l~~~A~~~v-~~~---------~~~~~~I~i~ki~Ggs~~ds~~v~Giv~~~~~~ 218 (522)
T TIGR02345 150 VLEKCA-ATALNSKLIAHEKEFFSKMIVDAVLQL-DID---------DLDLKLIGVKKVQGGSLQDSVLVNGVAFKKTFS 218 (522)
T ss_pred HHHHHH-HHHhccccccchHHHHHHHHHHHHHHH-hhc---------cCChhHheEEeecCCCHHhcceecceEEecccC
Confidence 444444 3555677654 588999999999853 211 235678999999999999999999999999999
Q ss_pred CCC---CcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHH
Q psy14945 179 HPD---MPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGEL 255 (629)
Q Consensus 179 ~~~---m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~el 255 (629)
+|+ ||++++||+|++++++|++++.+... .+.+++..++..++..|++.+.+. +..+.
T Consensus 219 ~~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~---------~i~~~~~~~~~~~~~~e~~~i~~~--------i~~i~-- 279 (522)
T TIGR02345 219 YAGFEQQPKKFANPKILLLNVELELKAEKDNA---------EIRVEDVEDYQAIVDAEWAIIFRK--------LEKIV-- 279 (522)
T ss_pred ccccccCCceeccceEEEEecCcccCccccce---------EEEECCHHHHHHHHHHHHHHHHHH--------HHHHH--
Confidence 886 48999999999999999998877654 677778888889999998888888 77776
Q ss_pred HhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCc
Q psy14945 256 LKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLG 335 (629)
Q Consensus 256 L~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG 335 (629)
..++ .+ +++++++++.+++||.+++|.++++++..+++|++++|||++++++..+++..+|
T Consensus 280 -----------~~g~----~v----v~~~~~i~d~~~~~L~~~~I~~~~~v~~~dl~ria~~tga~ii~~~~~l~~~~LG 340 (522)
T TIGR02345 280 -----------ESGA----NV----VLSKLPIGDLATQYFADHNIFCAGRVSDEDLKRVVKACGGSIQSTTSDLEADVLG 340 (522)
T ss_pred -----------hcCC----cE----EEeCCCccHHHHHHHHHCCcEEEecCCHHHHHHHHHHhCCeEEcchhhCChhhcc
Confidence 3443 23 3579999999999999999999999999999999999999999999999989999
Q ss_pred ccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 336 YAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 336 ~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
+|+.+++.+++++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++.+|||||++|++++.+|+++
T Consensus 341 ~~~~ie~~~~~~~r~~~~~g~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~ 420 (522)
T TIGR02345 341 TCALFEERQIGSERYNYFTGCPHAKTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREH 420 (522)
T ss_pred CCceEEEEEECCeEEEEEEcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHH
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999999998
Q ss_pred hhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHH
Q psy14945 416 KNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 495 (629)
Q Consensus 416 ~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~ 495 (629)
+....+++++++++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.++++.|+.+.|||||+.||+++
T Consensus 421 ~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~-~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~ 499 (522)
T TIGR02345 421 SKKIDGKQQLIIEAFAKALEIIPRSLCENAGFDSIEILNKLRSRHAK-GGKWYGVDINTEDIGDNFENFVWEPLLVKKNA 499 (522)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-CCCccceeCCCCcccchhhcCceEcHHHHHHH
Confidence 87888889999999999999999999999999999999999988764 34578999999999999999999999999999
Q ss_pred hhhhhhcCCCCeEEe
Q psy14945 496 INSWIISGLHPRVIT 510 (629)
Q Consensus 496 l~~a~e~a~~~~iV~ 510 (629)
++.|+++|...+.++
T Consensus 500 l~~A~e~a~~iL~id 514 (522)
T TIGR02345 500 LKAAFEAACTILSID 514 (522)
T ss_pred HHHHHHHHHHHHhHH
Confidence 999999988776654
No 18
>KOG0364|consensus
Probab=100.00 E-value=1.3e-49 Score=410.01 Aligned_cols=344 Identities=26% Similarity=0.386 Sum_probs=315.2
Q ss_pred hhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccccCeeEEEeeccc
Q psy14945 119 SDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISM 198 (629)
Q Consensus 119 ~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~n~kIll~~~~L 198 (629)
-+++.+||+.|..+.| +++|+.+| +++.|++||.++||++++|+.+++...||.|.+.++||||+|++|+|
T Consensus 171 ~~lal~avk~V~~~~g-~e~dik~y--------~kveKvpgg~l~~s~vl~Gv~~nkdv~Hpkmrr~IenprivLlD~~L 241 (527)
T KOG0364|consen 171 CNLALDAVKTVGVENG-REIDIKRY--------AKVEKVPGGLLEDSCVLKGVMINKDVTHPKMRRAIENPRIVLLDCPL 241 (527)
T ss_pred hhHHHHHHHHhhhccC-ceechhhh--------ccccccCcccccccceecceeeccccCcHHHHHHhhcCcEEEecCCc
Confidence 4566667777766644 47888775 68899999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccc
Q psy14945 199 EYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCS 278 (629)
Q Consensus 199 e~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~ 278 (629)
+|.|.+.+. .+.+...++...+++.|+++.... +..|. .++| .+
T Consensus 242 eykkGeSqt---------nve~~~eed~~r~Lqieee~v~~m--------c~~Ii-------------~v~p----Dl-- 285 (527)
T KOG0364|consen 242 EYKKGESQT---------NVEIVKEEDFTRILQIEEEQVQAM--------CEVII-------------AVKP----DL-- 285 (527)
T ss_pred cCCCCcccc---------ceeeeechhHHHHHHhhHHHHHHH--------HHHHH-------------eecc----cE--
Confidence 999998775 677888889999999999988888 88887 5666 22
Q ss_pred cccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcc-cceEEEEEEcCeeEEEEeecC
Q psy14945 279 TSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGY-AGSVFEHVLGEEKFTFVEECK 357 (629)
Q Consensus 279 ~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~-~~~v~e~~i~~~~~~~~~~~~ 357 (629)
++++||++|.+++||.++++++++++++.|+.|+++.+|+++++.+++++..+.|+ |+.++...+++++|.||..|.
T Consensus 286 --VitekG~sdla~hyl~k~~iT~~rr~rKtDn~ria~acga~iv~rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck 363 (527)
T KOG0364|consen 286 --VITEKGVSDLAQHYLLKANITAIRRLRKTDNNRIARACGARIVNRPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCK 363 (527)
T ss_pred --EEeccchhHHHHHHHHhcCchhhhhhhccccchhhhhcCceeccChhhCchhccCcccceeeeeccCchhhhhhhhcC
Confidence 46899999999999999999999999999999999999999999999999998997 778888899999999999999
Q ss_pred CCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhh
Q psy14945 358 NPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLII 437 (629)
Q Consensus 358 ~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~i 437 (629)
+|+.|||++|||++.+++|++|.++||+.+.++.+.+|+++||||++||++++.|.+.+....+.+||.+.+.|.||+.+
T Consensus 364 ~pkaCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~~~GVekwPY~Ava~AlEvi 443 (527)
T KOG0364|consen 364 EPKACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSALMTGVEKWPYGAVAGALEVI 443 (527)
T ss_pred CCcceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhhccchhccchhhhhcCceec
Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred hHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 438 PKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 438 p~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
|++|++|||.+++..++.++..|.. |...+|+|+.++.++|+.+.++|+|..+|.+..++|++++.+.+.++
T Consensus 444 PrtliqncGan~Ir~lTalr~kh~~-G~~~~gi~g~tg~iVDm~~~~iwep~~vK~Q~~ktavesa~~LLRId 515 (527)
T KOG0364|consen 444 PRTLIQNCGANPIRALTALRAKHKE-GQRVWGIDGETGVIVDMVELGIWEPEAVKLQTGKTAVESACLLLRID 515 (527)
T ss_pred cHHHHhhcCccHHHHHHHHHHHhcC-cceeecccCceeeEeeeeeccccchhhhhhhhhhHHHHHHHHHHhhh
Confidence 9999999999999999999998875 66888999999999999999999999999999999999887766554
No 19
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=8.3e-48 Score=427.59 Aligned_cols=326 Identities=53% Similarity=0.832 Sum_probs=291.4
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++..|+... .+.|+.++++|+..-.... ...+++.++|++++||++.||++++|++|++++.+|+||+++
T Consensus 150 ts~~sk~~~~~~~~l~~l~~~A~~~v~~~~--------~~~~~~~I~i~ki~ggs~~ds~~i~G~~~~~~~~~~~m~~~~ 221 (484)
T cd03342 150 TSLRTKLHADLADQLTEIVVDAVLAIYKPD--------EPIDLHMVEIMQMQHKSDSDTKLIRGLVLDHGARHPDMPKRV 221 (484)
T ss_pred HHhCcccchhHHHHHHHHHHHHHHHHhhcC--------CccChhHeEEEEecCCChhhceEEeeEEEecCCCCCCCCccc
Confidence 343444332 4778888888887531110 134567899999999999999999999999999999999999
Q ss_pred cCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV 266 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~ 266 (629)
+||||++++++|++++++... .+.++ .
T Consensus 222 ~n~~Ill~~~~le~~~~~~~~---------~~~~~-------------------------------l------------- 248 (484)
T cd03342 222 ENAYILTCNVSLEYEKTEVNS---------GFFYS-------------------------------V------------- 248 (484)
T ss_pred cCceEEEEeCCCCCCccccCc---------EEEEE-------------------------------E-------------
Confidence 999999999999998777554 22221 1
Q ss_pred hhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEc
Q psy14945 267 NLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346 (629)
Q Consensus 267 ~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~ 346 (629)
++++++|++.++++|.+++|.+++++++++++|||++|||+++++++++++..+|+|+.++++.++
T Consensus 249 --------------vi~~~~I~~~al~~l~~~~I~av~~~~~~~l~~ia~~tGa~ii~~l~~~~~~~LG~~~~v~~~~ig 314 (484)
T cd03342 249 --------------VINQKGIDPPSLDMLAKEGILALRRAKRRNMERLTLACGGVAMNSVDDLSPECLGYAGLVYERTLG 314 (484)
T ss_pred --------------EEeCCCccHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCEEecccccCChhhCcccceEEEEEEC
Confidence 235999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHH
Q psy14945 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLG 426 (629)
Q Consensus 347 ~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~ 426 (629)
++++++|++|+++..+||+|||+++.+++|.+|+++||++++++++++|++|||||++|++++.+|++++....++++++
T Consensus 315 ~~~~~~i~~~~~~~~~tI~lrg~t~~~l~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~~~~ 394 (484)
T cd03342 315 EEKYTFIEGVKNPKSCTILIKGPNDHTITQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKAKLG 394 (484)
T ss_pred CeEEEEEECCCCCcEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999999999988888899999
Q ss_pred HHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCC
Q psy14945 427 IQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHP 506 (629)
Q Consensus 427 i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~ 506 (629)
++.|++||+.||++|++|+|+|+.+++.+|+..|.+ ++.++|+|+.+|++.|+.+.|||||+.+|+++++.|+++|...
T Consensus 395 i~~~a~Al~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~i 473 (484)
T cd03342 395 VQAFADALLVIPKTLAENSGLDVQETLVKLQDEYAE-GGQVGGVDLDTGEPMDPESEGIWDNYSVKRQILHSATVIASQL 473 (484)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-cCCceeeeCCCCcccchhhcCcEEcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988865 4567899999999999999999999999999999999999887
Q ss_pred eEEe
Q psy14945 507 RVIT 510 (629)
Q Consensus 507 ~iV~ 510 (629)
+.|+
T Consensus 474 L~ID 477 (484)
T cd03342 474 LLVD 477 (484)
T ss_pred hhhh
Confidence 7765
No 20
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.9e-47 Score=424.98 Aligned_cols=354 Identities=23% Similarity=0.351 Sum_probs=310.7
Q ss_pred hhhcccccc-hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccccc
Q psy14945 109 TCNISMEYE-KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVK 187 (629)
Q Consensus 109 ~~~~s~~~~-~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~ 187 (629)
++.+||... .++|+.++++|+..- +.. .....+++.++|++++|++++||++++|++|+++.. .||+.++
T Consensus 157 tsl~sK~~~~~~~ls~l~~~Ai~~v-~~~------~~~~~~~~~I~i~ki~G~s~~ds~li~Gi~~~~~~~--~~~k~i~ 227 (531)
T TIGR02346 157 ASISSKQYGNEDFLAQLVAKACSTV-MPK------NPENFNVDNIRVSKIMGGSISNSEVLKGMVFNREAE--GSVKRVK 227 (531)
T ss_pred HHhccccCchHHHHHHHHHHHHHHH-hhc------CCCcCChhHeeEEEecCCChhhceeEeeeEEeccCC--CCceecc
Confidence 555666554 788999999999853 110 001235778999999999999999999999999943 5799999
Q ss_pred CeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHh
Q psy14945 188 NAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVN 267 (629)
Q Consensus 188 n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~ 267 (629)
||||+++++++++++++.+. .+.+++...+..+...|.+++... +..+. .
T Consensus 228 n~kI~l~~~~l~~~~~~~~~---------~~~~~~~~~l~~~~~~e~~~i~~~--------l~~i~-------------~ 277 (531)
T TIGR02346 228 NAKVAVFSCPLDTATTETKG---------TVLIHNAEELLNYSKGEENQIEAY--------IKAIA-------------D 277 (531)
T ss_pred CCCEEEEecCcCCCcccCce---------EEEECCHHHHHHHHHHHHHHHHHH--------HHHHH-------------H
Confidence 99999999999999888665 677888788888888887777776 66665 2
Q ss_pred hccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcC
Q psy14945 268 LKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGE 347 (629)
Q Consensus 268 ~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~ 347 (629)
.+. .+ ++++++++|.+++||.+++|.++++++..+++||+++|||++++++..+++..+|+|+.+++.++++
T Consensus 278 ~g~----~l----vi~~~~I~d~~~~~l~~~~I~av~~~~~~~l~~Ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~ 349 (531)
T TIGR02346 278 SGV----NV----IVTGGSVGDMALHYCEKYNIMVLKIPSKFELRRLCKTVGATPLARLGAPQPEEIGYVDSVYVSEIGG 349 (531)
T ss_pred cCC----cE----EEECCCcCHHHHHHHHHCCcEEEecCCHHHHHHHHHHHCCEEecccccCCHhHccccceEEEEEECC
Confidence 332 11 4579999999999999999999999999999999999999999999999989999999999999999
Q ss_pred eeEEEEeecC-CCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHH
Q psy14945 348 EKFTFVEECK-NPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLG 426 (629)
Q Consensus 348 ~~~~~~~~~~-~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~ 426 (629)
+++.+|.+|. .+..+||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++..+.++++++
T Consensus 350 ~~~~~i~~~~~~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~~~~ 429 (531)
T TIGR02346 350 QKVTVFKQENGDSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLDQYA 429 (531)
T ss_pred EEEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHHHH
Confidence 9999998777 578999999999999999999999999999999999999999999999999999999887788899999
Q ss_pred HHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCC--CCCCCcccccchhhHHHHHhhhhhhcCC
Q psy14945 427 IQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGE--VLNPTSAGIYDNLTVKRQIINSWIISGL 504 (629)
Q Consensus 427 i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~--i~d~~e~~I~D~~~Vk~~~l~~a~e~a~ 504 (629)
+++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.++. +.|+.+.|||||+.||+++|+.|+++|.
T Consensus 430 ~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~Gid~~~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~ 508 (531)
T TIGR02346 430 IKKFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKK-GNTSSGIDIEAESDGVKDASEAGIYDNLATKKWAIKLATEAAV 508 (531)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCCccceeeeCCCccccChhhcCceEcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988754 3457899999998 5999999999999999999999999998
Q ss_pred CCeEEe
Q psy14945 505 HPRVIT 510 (629)
Q Consensus 505 ~~~iV~ 510 (629)
..+.++
T Consensus 509 ~iL~id 514 (531)
T TIGR02346 509 TVLRVD 514 (531)
T ss_pred HHhhhh
Confidence 877765
No 21
>KOG0363|consensus
Probab=100.00 E-value=1.3e-47 Score=386.92 Aligned_cols=371 Identities=24% Similarity=0.318 Sum_probs=338.7
Q ss_pred cccCCCCCCchhhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceE
Q psy14945 89 LNHGARHPDMPKSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCII 166 (629)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~ 166 (629)
.+|+-+...|+.++.+..+.|. +|+... ++|||.++|++|.+..|.. ++..|+|+|..||++.||+
T Consensus 141 ~dns~~~~kfr~DLl~iarTTL-~SKiLsq~kehFaelavdAV~rLkGs~-----------nL~~IqIIK~~Gg~l~dSf 208 (527)
T KOG0363|consen 141 IDNSSDKEKFREDLLKIARTTL-SSKILSQDKEHFAELAVDAVLRLKGST-----------NLEAIQIIKKLGGKLEDSF 208 (527)
T ss_pred hhccCchHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHhcCCC-----------CccceeeehhcCCcccccc
Confidence 6777788899999999997665 888764 8999999999999887764 5788999999999999999
Q ss_pred EEEeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCch
Q psy14945 167 LVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTT 246 (629)
Q Consensus 167 li~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt 246 (629)
|-+|+++++.+. -+.|++++||||++-|.+++.+|.+.++. .+.+.+....+.+-..|.+.+.+.
T Consensus 209 LDeGFlL~K~ig-v~qpkriena~iLIANT~mDtDKvKvfGa--------rvrVds~~klaelE~AEkeKmK~K------ 273 (527)
T KOG0363|consen 209 LDEGFLLDKKIG-VNQPKRIENAKILIANTPMDTDKVKVFGA--------RVRVDSTAKLAELEKAEKEKMKEK------ 273 (527)
T ss_pred ccccceeccccC-CCCcccccccceEEecCCCcccceeeecc--------eEeecchhHHHHHHHHHHHHHHHH------
Confidence 999999998753 36799999999999999999999999872 788888888999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccc
Q psy14945 247 STVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSV 326 (629)
Q Consensus 247 ~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~ 326 (629)
|.+|. ..+. .|. +...-|.++-.++|+.++|+++...+..-++|++.+|||.+.+++
T Consensus 274 --V~kI~-------------~hgi-----N~F---iNRQLiYnyPeqLf~dagi~aIEHADFdGiERLalvtGGeI~STF 330 (527)
T KOG0363|consen 274 --VEKIL-------------KHGI-----NVF---INRQLIYNYPEQLFADAGIMAIEHADFDGIERLALVTGGEIVSTF 330 (527)
T ss_pred --HHHHH-------------hcCC-----cEE---eehhHhhcCHHHHHhhcCcceeecccchhHHHHhhcccceeeecc
Confidence 88887 3332 232 345566788899999999999999998889999999999999999
Q ss_pred cccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHH
Q psy14945 327 EGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEV 406 (629)
Q Consensus 327 ~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El 406 (629)
+..+...+|+|+.+++..+|+++++.|++|.....|||+|||+++.+++|.+|+++||++++....++++++.||||.||
T Consensus 331 d~p~~~klG~C~~IeeimiGed~li~FSGv~~GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm 410 (527)
T KOG0363|consen 331 DNPELVKLGECDLIEEIMIGEDKLIKFSGVKLGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEM 410 (527)
T ss_pred CCcchhccccchhhHHHhcCccceeeecccccccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCccccc
Q psy14945 407 AAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIY 486 (629)
Q Consensus 407 ~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~ 486 (629)
..+..+.+++...++++...+++|++||..+|.+|++|+|||+.+++.+|+..|.. |..+.|+|.++|.+.||.+.||.
T Consensus 411 ~Ma~av~~~A~~~pGkea~AieAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~-g~~t~Gld~~~G~i~dm~~~Gi~ 489 (527)
T KOG0363|consen 411 LMAKAVDKEAQETPGKEALAIEAFARALRQLPTIIADNAGYDSAELVAQLRAEHYN-GRTTMGLDVRNGEIGDMRELGIV 489 (527)
T ss_pred HHHHHHHHHHhhCCchhhHHHHHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhc-CCcccccccccCchhhHHHhhhH
Confidence 99999999999999999999999999999999999999999999999999999986 77899999999999999999999
Q ss_pred chhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 487 DNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 487 D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
|++.+|+..+.+|.|+|.....|+
T Consensus 490 es~~vK~~vv~sasEaae~ilrvD 513 (527)
T KOG0363|consen 490 ESLKVKQAVVSSASEAAEMILRVD 513 (527)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhhh
Confidence 999999999998888877766655
No 22
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.6e-45 Score=409.07 Aligned_cols=325 Identities=27% Similarity=0.424 Sum_probs=283.9
Q ss_pred HHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCcccccccc-ceeEEEecCCCccceEEEEeEEEeccCC
Q psy14945 102 VKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHIL-TCNISMEYEKSDVCIILVKGVVLNHGAR 178 (629)
Q Consensus 102 ~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~-~i~i~~i~Ggs~~dS~li~Gvv~~~~~~ 178 (629)
+.... .++..|+..+ .+.++.++++|+.....+.. ......++. +++|++++||++.||++++|++|++++.
T Consensus 147 l~~i~-~t~l~sK~~~~~~~~ls~lv~~Ai~~v~~~~~----~~~~~id~~~~I~i~ki~Ggs~~ds~li~Gvvi~k~~~ 221 (480)
T cd03337 147 MLKII-KSCIGTKFVSRWSDLMCNLALDAVKTVAVEEN----GRKKEIDIKRYAKVEKIPGGEIEDSRVLDGVMLNKDVT 221 (480)
T ss_pred HHHHH-HHHhccCcchhHHHHHHHHHHHHHHhhccccC----CCCCcCChhhceEEEEecCCCHHhcccccceEEeccCC
Confidence 44443 3566777664 46789999999875321100 000011222 4899999999999999999999999999
Q ss_pred CCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhh
Q psy14945 179 HPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQ 258 (629)
Q Consensus 179 ~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~ 258 (629)
|+.||++++||||++++|+|++ .
T Consensus 222 ~~~m~~~~~n~kIlll~~~Le~----------------------------------------------------l----- 244 (480)
T cd03337 222 HPKMRRRIENPRIVLLDCPLEY----------------------------------------------------L----- 244 (480)
T ss_pred CCCCCcEecCCCEEEEecCcce----------------------------------------------------E-----
Confidence 9999999999999999999852 1
Q ss_pred hHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcc-c
Q psy14945 259 ADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGY-A 337 (629)
Q Consensus 259 Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~-~ 337 (629)
+ +++++|++.+++||.+++|.+++++++++++|||++|||+++++++.++++.+|+ |
T Consensus 245 ----------------v------i~~k~I~d~al~~L~~~~I~~v~~v~~~~L~rIa~~tGa~ii~~~~~l~~~~LG~~~ 302 (480)
T cd03337 245 ----------------V------ITEKGVSDLAQHYLVKAGITALRRVRKTDNNRIARACGATIVNRPEELTESDVGTGA 302 (480)
T ss_pred ----------------E------EeCCCccHHHHHHHHHCCcEEEEeCCHHHHHHHHHHHCCEEecchhhCCHHHcCCcc
Confidence 1 3599999999999999999999999999999999999999999999999999999 6
Q ss_pred ceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh
Q psy14945 338 GSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN 417 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~ 417 (629)
+.+++.+++++++++|++|+++..|||+|||+++..++|++|+++||+++++++++++.+|||||++|++++.+|++++.
T Consensus 303 ~~~~~~~~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~ 382 (480)
T cd03337 303 GLFEVKKIGDEYFTFITECKDPKACTILLRGASKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAK 382 (480)
T ss_pred cEEEEEEeCCeEEEEEEcCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhh
Confidence 67777788889999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhh
Q psy14945 418 TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 497 (629)
Q Consensus 418 ~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~ 497 (629)
.+.+.+++++++|++||+.||++|++|+|+|+.+++.+|+..|...++.++|+|+.+|.+.|+.+.|||||+.+|+++++
T Consensus 383 ~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~ 462 (480)
T cd03337 383 SIEGVEQWPYKAVASALEVIPRTLAQNCGANVIRTLTELRAKHAQGENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYK 462 (480)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCCeECeeccCCCcccchhccCeEcHHHHHHHHH
Confidence 88889999999999999999999999999999999999998886511468999999999999999999999999999999
Q ss_pred hhhhcCCCCeEEe
Q psy14945 498 SWIISGLHPRVIT 510 (629)
Q Consensus 498 ~a~e~a~~~~iV~ 510 (629)
.|+++|...+.++
T Consensus 463 ~A~e~a~~iL~id 475 (480)
T cd03337 463 TAIEAACMLLRID 475 (480)
T ss_pred HHHHHHHHHhhhh
Confidence 9999988766554
No 23
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-44 Score=400.27 Aligned_cols=397 Identities=25% Similarity=0.320 Sum_probs=334.6
Q ss_pred hhhhHHHhcCchhhh-----------hhhhcccccccccCCC----CCCchhhHHHHhHhhhhcccccc-----------
Q psy14945 64 HAQVREERAHPDMQH-----------QHGIREEGVVLNHGAR----HPDMPKSVKNAHILTCNISMEYE----------- 117 (629)
Q Consensus 64 ~~~~~~e~~~~~~~~-----------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~----------- 117 (629)
.++.++-.+.+++-+ +.+++++...+..+.. .++++.++..|.+.....+++..
T Consensus 67 akll~eva~~qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~~~~~t 146 (524)
T COG0459 67 AKLLVEVAKKQDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEELKIAIT 146 (524)
T ss_pred hHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhh
Confidence 466666666777665 7778888877766663 45666676666644443333221
Q ss_pred ---------hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC-CCCCCc-ccc
Q psy14945 118 ---------KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA-RHPDMP-KSV 186 (629)
Q Consensus 118 ---------~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~-~~~~m~-~~i 186 (629)
.++|+.++++|+..- +... .+++.+.+++..||+..||.+++|++|++++ .|+.|| +++
T Consensus 147 ~v~sk~~~~~~~i~~lv~~Av~~v-~~~~---------~d~~~i~~vk~~gg~~~e~~vveG~~~dkg~~s~~~~~~~~~ 216 (524)
T COG0459 147 SVASKSANSDEEIGELVVEAVEKV-GKEQ---------SDLDGIIIVKESGGSETELEVVEGMVFDKGYLSPYFMPDKRL 216 (524)
T ss_pred eeeeeeccChHHHHHHHHHHHHHh-cccc---------cccCCeEEEEecCCCccceEEEeeEEecCCccCCCCCCcccc
Confidence 257888888888753 2210 1567899999999999999999999999955 556799 899
Q ss_pred cCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHH-HHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARAS-TAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~-~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
+||+|++++++|++.+++... .+.++..+|+..+..+|+ +.+... +..+.
T Consensus 217 e~~~Ili~d~~l~~~k~~l~~---------e~~i~~~~~l~~i~e~ee~e~l~~~--------v~ni~------------ 267 (524)
T COG0459 217 ENPKILLLDKKLEIKKPELPL---------EIVISSGKPLLIIAEDEEGEALATL--------VVNIL------------ 267 (524)
T ss_pred ccceEEEEccccccccccCcc---------eeEecCccHHHHHHHHHHHHHHHHH--------HHHHH------------
Confidence 999999999999998887763 688899999999999988 776666 66655
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhH-HHHHHHhCCcccccccccCcCCCcc--cceEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNM-ERLSLACGGTAMNSVEGLEPAHLGY--AGSVFE 342 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl-~rIak~tGg~i~~s~~~l~~~~lG~--~~~v~e 342 (629)
..+. .+| +++++|++|.+++||.+.+|.+.+++.+.++ +++++++||++++...+.+...+|. |..+++
T Consensus 268 -~~g~----~~v---vv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~~~l~~~~ga~~v~~~~d~t~~~~G~~~~~~ve~ 339 (524)
T COG0459 268 -RGGA----NVV---VVKAPGIDDLAKAYLEDIAILTGRRVKKEDLGERLAKLGGAKIVSVLKDLTTIVLGEGAAGLVEE 339 (524)
T ss_pred -hcCC----CEE---EEECCCCcHHHHHHHHhhcceecceecchhhHHHHHHccCceEEeecccCceeecCccccceEEE
Confidence 2222 434 4689999999999999999999999999999 8999999999999999999999999 999999
Q ss_pred EEEcCeeEEEEeecCC--CccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcC
Q psy14945 343 HVLGEEKFTFVEECKN--PQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVK 420 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~~--~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~ 420 (629)
..+++..+.+|.+|.. +..|||++||+++..++|.+++++||+++++++++++.+|||||++|+.++..|++++....
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~tI~vrgate~~ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~ 419 (524)
T COG0459 340 TKTGDYDMEKLQERKAKAGGVATILVRGATEVELDEKERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVE 419 (524)
T ss_pred eeccchhhhhhhhhhhcCCCeEEEEECCccHhHHHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCC
Confidence 9899999999998875 78999999999999999999999999999999999999999999999999999998854444
Q ss_pred c-chHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCC-CCCCcccccchhhHHHHHhhh
Q psy14945 421 G-KSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEV-LNPTSAGIYDNLTVKRQIINS 498 (629)
Q Consensus 421 ~-~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i-~d~~e~~I~D~~~Vk~~~l~~ 498 (629)
+ .+|+++++|++||+.||++|++|+|+|+.+++.+|++.|. ...+|+|+.++.+ .||.+.||+||+.|++++++.
T Consensus 420 g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~v~~~L~~~~~---~~~~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~ 496 (524)
T COG0459 420 GGDEQLGIEAFARALEAPPRQLAENAGLDPIEVLSKLRSAHA---TTNYGIDAFTGEYEDDMIEAGIIDPLKVKRSALKN 496 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccc---CCccceeccCCccccchHhccCcChHHHHHHHHHH
Confidence 4 8999999999999999999999999999999999998774 2348999999998 779999999999999999999
Q ss_pred hhhcCCCCeEEe
Q psy14945 499 WIISGLHPRVIT 510 (629)
Q Consensus 499 a~e~a~~~~iV~ 510 (629)
|+++|...+.+.
T Consensus 497 A~e~a~llL~~d 508 (524)
T COG0459 497 AAEAAGLLLTID 508 (524)
T ss_pred HHHHHHHHHHHH
Confidence 998887665443
No 24
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=6.6e-44 Score=395.62 Aligned_cols=315 Identities=35% Similarity=0.529 Sum_probs=284.3
Q ss_pred hhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccc
Q psy14945 108 LTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKS 185 (629)
Q Consensus 108 ~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~ 185 (629)
.++..||... .++++.++++++... +... ...+.+.++|++++||++.||++++|++|++++.+|+||+.
T Consensus 144 ~tsl~sK~~~~~~~~l~~l~~~Ai~~v-~~~~-------~~~~~~~I~i~k~~gg~~~ds~li~Gi~~~~~~~~~~m~~~ 215 (464)
T cd00309 144 TTSLNSKLVSGGDDFLGELVVDAVLKV-GKEN-------GDVDLGVIRVEKKKGGSLEDSELVVGMVFDKGYLSPYMPKR 215 (464)
T ss_pred HhcccccccccchHHHHHHHHHHHHHh-cccc-------CccccceEEEEecCCCCcccceeeeeEEEecCCCCCCCcee
Confidence 3555666543 567899999998753 2110 03456889999999999999999999999999999999999
Q ss_pred ccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 186 VKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 186 i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
++||||++++++|++ .
T Consensus 216 ~~n~~Ili~~~~Le~----------------------------------------------------l------------ 231 (464)
T cd00309 216 LENAKILLLDCKLEY----------------------------------------------------V------------ 231 (464)
T ss_pred ecCceEEEEecCcce----------------------------------------------------E------------
Confidence 999999999999952 1
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i 345 (629)
++++++|++.++++|.+++|.+++++++++++||+++|||+++++++.++...+|+|+.+++.++
T Consensus 232 ---------------Ii~~~~I~~~al~~L~~~~I~~v~~~~~~~L~~Ia~~tGa~ii~~~~~~~~~~lG~~~~v~~~~~ 296 (464)
T cd00309 232 ---------------VIAEKGIDDEALHYLAKLGIMAVRRVRKEDLERIAKATGATIVSRLEDLTPEDLGTAGLVEETKI 296 (464)
T ss_pred ---------------EecCCCcCHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCcccCccccEEEEEEE
Confidence 13588999999999999999999999999999999999999999999999899999999999999
Q ss_pred cCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHH
Q psy14945 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRL 425 (629)
Q Consensus 346 ~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~ 425 (629)
+++++++|.+|..+..|||+|||+++..++|.+++++||++++++++++|.+|||||++|++++.+|++++.+..+.+++
T Consensus 297 g~~~~~~~~~~~~~~~~TIllrG~t~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~~~ 376 (464)
T cd00309 297 GDEKYTFIEGCKGGKVATILLRGATEVELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQL 376 (464)
T ss_pred cCeeEEEEEecCCCCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHHHH
Confidence 99999999988888999999999999999999999999999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 426 GIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 426 ~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
++++|++||+.||++|++|+|+|+.+++.+|+..|.+ +..+.|+|+.++++.|+.+.|||||+.||+++++.|+++|..
T Consensus 377 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~-~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~ 455 (464)
T cd00309 377 GIEAFADALEVIPRTLAENAGLDPIEVVTKLRAKHAE-GGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKSATEAASL 455 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-cCCCeeEECCCCcEeehhhccCeecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988765 445789999999999999999999999999999999998877
Q ss_pred CeEEe
Q psy14945 506 PRVIT 510 (629)
Q Consensus 506 ~~iV~ 510 (629)
.+.++
T Consensus 456 iL~id 460 (464)
T cd00309 456 ILTID 460 (464)
T ss_pred HHhHH
Confidence 65543
No 25
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=2.2e-43 Score=393.49 Aligned_cols=358 Identities=29% Similarity=0.464 Sum_probs=317.6
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+.+.. .+...++... .++++.++++++ ..... . .+++.+++++++|++.+||++++|++|++++
T Consensus 117 ~~l~~i~-~t~l~~k~~~~~~~~l~~li~~a~-~~~~~-------~---~~~~~i~i~~i~g~~~~dS~li~Giv~~~~~ 184 (485)
T PF00118_consen 117 ESLLNIA-KTSLNSKISSSWSDHLSKLIVDAI-KSIKS-------N---FDLDNIKIIKIPGGSISDSELINGIVLDKGF 184 (485)
T ss_dssp HHHHHHH-HHHHTTSCGGGCHHHHHHHHHHHH-HHHTT-------T---HHGGGEEEEEEESSSSGGEEEESEEEESSSB
T ss_pred hhhhhhh-cccccccccccchhhhhhhHHHHH-Hhhcc-------c---ccccchhhhhhccccccccccccceeeeccc
Confidence 4454444 3444444332 488999999999 43211 1 4677799999999999999999999999999
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.+++||++++||||++++++|+++++ .+. ++.+++.+....+...|.+++... +..+.
T Consensus 185 ~~~~~~~~~~~~~Ill~~~~L~~~~~-~~~---------~~~~~~~~~~~~~~~~e~~~l~~~--------~~~i~---- 242 (485)
T PF00118_consen 185 SSPNMPKKIENPKILLLNCPLEYSKS-FKS---------EIRITSPEQLDELSKQEKKYLKKI--------LEKII---- 242 (485)
T ss_dssp SSTTSBSEEESEEEEEESSEBSSCCH-STE---------EEEESSTHHHHHHHHHHHHHHHHH--------HHHHH----
T ss_pred cccccccccccceEEeeecccccccc-ccc---------ccchhhHHHHHHHHhhhhhhhccc--------cceEe----
Confidence 99999999999999999999999877 654 788999999999999999888887 77776
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCccc
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYA 337 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~ 337 (629)
..++ .+ +++++++++.++++|.+++|.++++++..++++|+++|||++++++.++++..+|+|
T Consensus 243 ---------~~~~----~l----Ii~~~~i~~~~l~~l~~~~I~~i~~v~~~~l~~i~~~tg~~ii~~~~~l~~~~lG~~ 305 (485)
T PF00118_consen 243 ---------NLGV----NL----IISQKSIDDEALQYLNKNGILVIRRVSKEDLERIARATGASIISSLDDLSDEDLGFC 305 (485)
T ss_dssp ---------TTTS----SE----EEESSEBTHHHHHHHHHCTHEEESSEHHHHHHHHHHHHTSBEBSSCGGSTGGGSEEE
T ss_pred ---------eecc----ce----eeeecccccccchhhhhhhhhccccchHHHHHhhhcccCCcEecccccccchhhhhh
Confidence 3333 22 567999999999999999999999999999999999999999999999988889999
Q ss_pred ceEEEEEEcCeeEEEEe--ecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 338 GSVFEHVLGEEKFTFVE--ECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~--~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
+.+++..++++++++|. +|.....+|++|||+++..++|.+++++||+++++.+++++.+|||||++|++++.+|+++
T Consensus 306 ~~v~~~~i~~~~~~~~~~~~~~~~~~~Till~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~ 385 (485)
T PF00118_consen 306 KSVEEREIGNKKYIFIEGIGCLSSKICTILLRGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKY 385 (485)
T ss_dssp EEEEEEEETSSEEEEEEEHSESSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccccccCceEEEeccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHh
Confidence 99999999999999998 5788899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHH
Q psy14945 416 KNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 495 (629)
Q Consensus 416 ~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~ 495 (629)
.....+..++++++|++||+.||++|++|+|+|+.+++++|+..|.. +.++|+|+.++++.|+.+.|||||+.+|+++
T Consensus 386 ~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~h~~--~~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~ 463 (485)
T PF00118_consen 386 AKSLSGKEQLAIEAFADALESIPKTLAQNAGLDSSEVISKLKSFHNN--GNNYGIDLDTGEIVDMKEAGILDPLLVKISA 463 (485)
T ss_dssp HHCSSSHHHHHHHHHHHHTTHHHHHHHHHTTSTHHHHHHHHHHHHHS--TTTEEEETTTTEEEETTTTTCEEEHHHHHHH
T ss_pred hhcccCchhhhHHHHHHHHHHhhhhhhhccCCCceeeehhhHhhhcc--ccccCcCccCCceeccccccchhhHHHHHHH
Confidence 98888899999999999999999999999999999999999987753 4589999999999999999999999999999
Q ss_pred hhhhhhcCCCCeEEe
Q psy14945 496 INSWIISGLHPRVIT 510 (629)
Q Consensus 496 l~~a~e~a~~~~iV~ 510 (629)
++.|+++|...+.++
T Consensus 464 l~~A~~~a~~iL~id 478 (485)
T PF00118_consen 464 LKSAVEIASLILRID 478 (485)
T ss_dssp HHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999887665443
No 26
>KOG0358|consensus
Probab=100.00 E-value=1.7e-44 Score=365.99 Aligned_cols=362 Identities=21% Similarity=0.252 Sum_probs=317.7
Q ss_pred hhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccc
Q psy14945 108 LTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKS 185 (629)
Q Consensus 108 ~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~ 185 (629)
.|+..|+... .+-++..||++|..- --|....+.++.+++|+|-.||+++|+++++|++|+.......-|++
T Consensus 162 tTsLnSKvvSq~s~llapmAVdAV~kv------~dp~~~~nvdlkdIkivkklGgtvdDte~i~glvl~~~~~~~~gptr 235 (534)
T KOG0358|consen 162 TTSLNSKVVSQYSSLLAPMAVDAVLKV------IDPENATNVDLKDIKIVKKLGGTVDDTELIKGLVLTQKASKSAGPTR 235 (534)
T ss_pred HhHhhHHHHHhhccccchHHHHHHHhc------cCcccccccchhhhhhHHhhCCccchhhhhcceEEeeecccCCCcch
Confidence 3555666654 345677778888742 12445567889999999999999999999999999998877678999
Q ss_pred ccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 186 VKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 186 i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
++++||.+++|+|+++|+++.. ++.++++.++++++.+|++|+-+. |.+|..
T Consensus 236 iekAkIglIQF~iS~PKtdmen---------~iiv~DyaqMdrilkeER~YiL~m--------cKkIKk----------- 287 (534)
T KOG0358|consen 236 IEKAKIGLIQFQISPPKTDMEN---------QIIVNDYAQMDRILKEERQYILNM--------CKKIKK----------- 287 (534)
T ss_pred hhhceeeEEEEEecCCCCCccc---------ceEecCHHHHHHHHHHHHHHHHHH--------HHHHHh-----------
Confidence 9999999999999999999887 799999999999999999999999 888872
Q ss_pred HhhccccccCc-cccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEE-
Q psy14945 266 VNLKMHKFAPD-CSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEH- 343 (629)
Q Consensus 266 ~~~~~~~~l~v-~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~- 343 (629)
.+. .+ ..+.++-...++|.++|||++.+|+++..+.+.|++.+|+.+|++++.+++.++.+.+|++..++|.
T Consensus 288 --~gc----nvLliQKSILRdavsDLAlHfL~klkimvikdieRediefick~l~c~Pia~id~f~~d~Lg~adlveE~~ 361 (534)
T KOG0358|consen 288 --AGC----NVLLIQKSILRDAVSDLALHFLAKLKIMVIKDIEREDIEFICKTLGCKPIADIDHFTADKLGSADLVEETD 361 (534)
T ss_pred --cCC----eEEEEeHHHHHHHHHHHHHHHHHhCcEEEEccccHhhHHHHHhhcCCeecchhhhcChhhcCcchhhhhcc
Confidence 221 11 0011222344589999999999999999999999999999999999999999999999999999987
Q ss_pred EEcCeeEEEEeecCC-CccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcc
Q psy14945 344 VLGEEKFTFVEECKN-PQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGK 422 (629)
Q Consensus 344 ~i~~~~~~~~~~~~~-~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~ 422 (629)
.-|+.++.-+.++.+ ...++|++||+++..++|.+|+++||++++|++.+.+++++|||+.|+.++..|.+++....|.
T Consensus 362 ~~G~gkivk~tg~~n~g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t~eG~ 441 (534)
T KOG0358|consen 362 SSGEGKIVKITGIQNAGRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALARTLEGV 441 (534)
T ss_pred cCCCccEEEEEEeecCCCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhhhccc
Confidence 346669998888877 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhc
Q psy14945 423 SRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIIS 502 (629)
Q Consensus 423 ~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~ 502 (629)
+.+++++||+|||.||.+|++|+|++++.++++||+.|.+ |..+.|++.+.|.+.|+++..+..|+.|-.++++.|+|+
T Consensus 442 ~~yc~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haq-ge~~aGInVRkg~~tni~ee~VvQPllVs~SaitlA~Et 520 (534)
T KOG0358|consen 442 EAYCWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQ-GEKNAGINVRKGGITNILEENVVQPLLVSISAITLATET 520 (534)
T ss_pred hhHHHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhc-CCcccceeeecccchhhHHHhcccceeeeHHHHHHHHHH
Confidence 9999999999999999999999999999999999999986 778999999999999999999999999999999999888
Q ss_pred CCCCeEEe
Q psy14945 503 GLHPRVIT 510 (629)
Q Consensus 503 a~~~~iV~ 510 (629)
....+-++
T Consensus 521 vr~ILKID 528 (534)
T KOG0358|consen 521 VRSILKID 528 (534)
T ss_pred HHHHhhhh
Confidence 77765544
No 27
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.7e-43 Score=390.64 Aligned_cols=316 Identities=24% Similarity=0.383 Sum_probs=277.7
Q ss_pred hhhcccccc-hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccccc
Q psy14945 109 TCNISMEYE-KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVK 187 (629)
Q Consensus 109 ~~~~s~~~~-~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~ 187 (629)
+...|+... .++|+.++++++... +.. ..+..+++.++|++++||++.||++++|++|++... .++++++
T Consensus 147 t~l~sk~~~~~~~l~~l~~~a~~~~-~~~------~~~~~~~~~i~i~ki~Gg~~~ds~lv~Giv~~~~~~--~~~~~~~ 217 (472)
T cd03341 147 TAIASKQYGNEDFLSPLVAEACISV-LPE------NIGNFNVDNIRVVKILGGSLEDSKVVRGMVFKREPE--GSVKRVK 217 (472)
T ss_pred HHhcccccchHHHHHHHHHHHHHHH-hhc------cCCcCChhHeEEEEecCCCcccceEEeeEEEccccC--CCceecc
Confidence 333444433 677888888888753 110 011345778999999999999999999999987653 4568899
Q ss_pred CeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHh
Q psy14945 188 NAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVN 267 (629)
Q Consensus 188 n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~ 267 (629)
||||++++++|++ +
T Consensus 218 n~~Ili~~~~Le~----------------------------------------------------g-------------- 231 (472)
T cd03341 218 KAKVAVFSCPFDI----------------------------------------------------G-------------- 231 (472)
T ss_pred CCcEEEEeccccC----------------------------------------------------C--------------
Confidence 9999999999953 1
Q ss_pred hccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcC
Q psy14945 268 LKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGE 347 (629)
Q Consensus 268 ~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~ 347 (629)
+ .+ ++++++|++.+++||.+++|.+++++++.+++||+++|||+++++++.+++..+|+|+.+++.++++
T Consensus 232 --~----~l----vi~~~~I~d~al~~l~~~~I~av~~~~~~~Le~Ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~ 301 (472)
T cd03341 232 --V----NV----IVAGGSVGDLALHYCNKYGIMVIKINSKFELRRLCRTVGATPLPRLGAPTPEEIGYCDSVYVEEIGD 301 (472)
T ss_pred --C----eE----EEECCCCCHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHhHCCCceEEEEEEECC
Confidence 0 01 2469999999999999999999999999999999999999999999999989999999999999999
Q ss_pred eeEEEEeecCC-CccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHH
Q psy14945 348 EKFTFVEECKN-PQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLG 426 (629)
Q Consensus 348 ~~~~~~~~~~~-~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~ 426 (629)
+++++|.+|.. +..|||+|||+++..++|.+|+++||++++++++++|++|||||++|++++.+|++++....++++++
T Consensus 302 ~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~~~~ 381 (472)
T cd03341 302 TKVVVFRQNKEDSKIATIVLRGATQNILDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLEQYA 381 (472)
T ss_pred eeEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHHHHH
Confidence 99999998877 78999999999999999999999999999999999999999999999999999999877778889999
Q ss_pred HHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccC--CCCCCCcccccchhhHHHHHhhhhhhcCC
Q psy14945 427 IQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSG--EVLNPTSAGIYDNLTVKRQIINSWIISGL 504 (629)
Q Consensus 427 i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~--~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~ 504 (629)
+++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.+| ++.|+.+.|||||+.||+++++.|+++|.
T Consensus 382 ~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~Gid~~~g~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~ 460 (472)
T cd03341 382 IKKFAEAFEVVPRTLAENAGLDATEVLSELYAAHQK-GNKSAGVDIESGDEGTKDAKEAGIFDHLATKKWAIKLATEAAV 460 (472)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-cCCeeeeeccCCCCCccChhhccceecHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887754 455799999999 99999999999999999999999999988
Q ss_pred CCeEEe
Q psy14945 505 HPRVIT 510 (629)
Q Consensus 505 ~~~iV~ 510 (629)
..+.++
T Consensus 461 ~iL~id 466 (472)
T cd03341 461 TVLRVD 466 (472)
T ss_pred HHhhhc
Confidence 776654
No 28
>KOG0360|consensus
Probab=100.00 E-value=1.1e-43 Score=369.28 Aligned_cols=365 Identities=26% Similarity=0.349 Sum_probs=321.0
Q ss_pred hhhHHHHhHhhhhcccccc--hhhHHHHHHHHHhh---hcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEE
Q psy14945 99 PKSVKNAHILTCNISMEYE--KSDVCIILVKGVVL---NHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVL 173 (629)
Q Consensus 99 ~~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~---~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~ 173 (629)
++++.++++ +..+|+... .+.|+..+++++.. ..-+.+ |+| +++.++|.|.+|+|..||.+++|+.+
T Consensus 148 ~~~Lin~~k-tsmsSK~i~~ds~~f~~~Vvda~l~v~~~~~~ge---~~y----pi~~vnILkahG~s~~eS~l~~GyaL 219 (545)
T KOG0360|consen 148 TQILINLAK-TSMSSKIIGMDSDFFTEMVVDALLAVKILDINGE---PHY----PINSVNILKAHGKSQIESMLLPGYAL 219 (545)
T ss_pred hHHHHHHHH-hhhcceecccchHHHHHHHHHHHHHHhhcccCCc---eec----cccceeEEecCCccchhheeecceee
Confidence 456777774 666888886 45677777766664 221222 333 47889999999999999999999999
Q ss_pred eccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHH
Q psy14945 174 NHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIG 253 (629)
Q Consensus 174 ~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~ 253 (629)
+....+..||++++|+||++++|.|...+.+++. ++.+.++..+.++-+.|.....+. +.+|.
T Consensus 220 nc~~asq~m~~~i~~~Kiacld~~Lqk~km~lGv---------~vvv~dp~kle~ir~~e~~itkeR--------i~kIl 282 (545)
T KOG0360|consen 220 NCSVASQMMPLRIKNAKIACLDFTLQKTKMKLGV---------QVVVDDPEKLEQIRQREQDITKER--------IKKIL 282 (545)
T ss_pred eccHhhhccccccccceeeeEecccccccccccc---------eEEEcChHHHHHHHHHHhHhHHHH--------HHHHH
Confidence 9999999999999999999999999998888776 788888888888888888777777 77776
Q ss_pred HHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccc------
Q psy14945 254 ELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVE------ 327 (629)
Q Consensus 254 elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~------ 327 (629)
.-+. .+ +|+++||+|.+++||.++++++++|+.+.||++|+|+||+++++|+-
T Consensus 283 -------------~~ga----nv----VLtt~gIddmc~K~~veagamAVrR~~k~dlk~iakatGat~~sSla~l~gee 341 (545)
T KOG0360|consen 283 -------------ATGA----NV----VLTTGGIDDMCLKYFVEAGAMAVRRCKKEDLKRIAKATGATLLSSLANLEGEE 341 (545)
T ss_pred -------------hcCC----cE----EEEcCCccHHHHHHHHHcchhhhHHHHHHHHHHHHHhhCCeeeehhhcccccc
Confidence 3332 22 67899999999999999999999999999999999999999999985
Q ss_pred ccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHH
Q psy14945 328 GLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVA 407 (629)
Q Consensus 328 ~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~ 407 (629)
.+.+..+|+++.+.+.+|+++.++++.+.+. ..++|+|||++++.++|++|+++|++++++..++++++||||||+|.+
T Consensus 342 tf~~~~lG~a~evvqeri~dde~ilikg~ka-~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~a 420 (545)
T KOG0360|consen 342 TFEPASLGSADEVVQERIGDDELILIKGTKA-TSASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETA 420 (545)
T ss_pred ccChhhccchhHHHHHhcccceeEEeccCcc-ceeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHH
Confidence 4778889999999999999999999976444 489999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCC-------CCceEEEEeccCCCCCC
Q psy14945 408 AWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEA-------PGVAVGVDVNSGEVLNP 480 (629)
Q Consensus 408 l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~-------~~~~~Gid~~t~~i~d~ 480 (629)
|+-||++|+.+..++++..+-.|++||.+||++|+-|++.|+.+.+++++..|..+ ..+|+|+++.+|.+.|.
T Consensus 421 Ls~yle~~a~s~~srE~laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng~~~dn 500 (545)
T KOG0360|consen 421 LSIYLENFATSVGSREQLAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLINGKIRDN 500 (545)
T ss_pred HHHHHHhhcccCccHHHHHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhccCCccccchhhCccccccEeecc
Confidence 99999999999999999999999999999999999999999999999999887641 12589999999999999
Q ss_pred CcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 481 TSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 481 ~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.+.|+.+|-.+|...++.|+|++...+.++
T Consensus 501 ~~~g~~ep~~~kvksLk~ateaaitiLriD 530 (545)
T KOG0360|consen 501 KSAGSFEPPIVKVKSLKFATEAAITILRID 530 (545)
T ss_pred eeeeeeccceeehhhhHHHHHhhhhhcchh
Confidence 999999999999999999999999888876
No 29
>KOG0361|consensus
Probab=100.00 E-value=1.7e-41 Score=344.76 Aligned_cols=365 Identities=19% Similarity=0.265 Sum_probs=272.7
Q ss_pred eccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH------------------------hhcc------
Q psy14945 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV------------------------NLKM------ 270 (629)
Q Consensus 221 ~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~------------------------~~~~------ 270 (629)
.+.||+++.++..++.||.++|||||||+.+++|+|+++..||+++ ....
T Consensus 70 divhPaaktlVdia~sQDaEVGDGTTSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~ 149 (543)
T KOG0361|consen 70 DIVHPAAKTLVDIARSQDAEVGDGTTSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKT 149 (543)
T ss_pred hhcChhHHHHHHHHhhccccccCCceeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchh
Confidence 3579999999999999999999999999999999999999999881 0000
Q ss_pred --ccccCccccccccccCCCHHHHHHHHHhCcEEEeccc---hhhHHHHHHHhCCccccccc--c--cCcCCCcccceEE
Q psy14945 271 --HKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK---RRNMERLSLACGGTAMNSVE--G--LEPAHLGYAGSVF 341 (629)
Q Consensus 271 --~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~---~~dl~rIak~tGg~i~~s~~--~--l~~~~lG~~~~v~ 341 (629)
++-+..|+.+.+++|.|+. -.+||+++.++++..++ ...++.|-|++||.+.+|+- . ++ ..+.+++ ++
T Consensus 150 ~~r~lL~KcA~T~lsSKlI~~-ek~fF~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS~lv~GVAFk-KtFsYAG-fE 226 (543)
T KOG0361|consen 150 ELRELLEKCAATALSSKLIRQ-EKEFFAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDSLLVNGVAFK-KTFSYAG-FE 226 (543)
T ss_pred hHHHHHHHHHHHHhhhhhhhh-hHHHHHHHHHHHHHhhccccchhhcceeecCCCccchhhhccceeee-ehccccc-hh
Confidence 2224458888999998854 67899999999987766 34789999999999999962 1 22 2334444 22
Q ss_pred EE--EEcCeeEEEEe---ecC-CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHH
Q psy14945 342 EH--VLGEEKFTFVE---ECK-NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQ 413 (629)
Q Consensus 342 e~--~i~~~~~~~~~---~~~-~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~ 413 (629)
++ .+.|.++..+. +.+ +...+.|.+.+..++ ..+.-=++|.+.+..+.....+ .|+.-=-..+++- +|+.
T Consensus 227 qqPKk~~NpkIl~LnvELElKaEkdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAn-VVLSkLpIGD~AT-QyFA 304 (543)
T KOG0361|consen 227 QQPKKFLNPKILLLNVELELKAEKDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGAN-VVLSKLPIGDLAT-QYFA 304 (543)
T ss_pred hCccccCCceEEEEeeeeeecccccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCe-EEEecccchHHHH-HHhh
Confidence 22 35678887775 111 335678888887766 3333335666665555322211 1222223345544 3554
Q ss_pred hhhhhcC-cchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCC------------------C---CceEEE-
Q psy14945 414 NYKNTVK-GKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEA------------------P---GVAVGV- 470 (629)
Q Consensus 414 ~~~~~i~-~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~------------------~---~~~~Gi- 470 (629)
+...-.. ...+.++.++. ..||.+...+.+++...+.+. | .+++.+
T Consensus 305 drdiFCAGRV~~eDl~Rv~-----------~acGGsi~tt~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~aktcTli 373 (543)
T KOG0361|consen 305 DRDIFCAGRVPEEDLNRVM-----------QACGGSIQTTVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKAKTCTLI 373 (543)
T ss_pred ccCceecCcCCHHHHHHHH-----------HhcCcchhhhhhhcchhhcchhhhHHHHhhcchhhhhhcCCCccceeEEE
Confidence 4332111 12344444443 447777776666665555541 1 123444
Q ss_pred -EeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhh
Q psy14945 471 -DVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTK 549 (629)
Q Consensus 471 -d~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~ 549 (629)
++-.++++.+.+|+++|+.++++.+++ +..+|+|||++| |++|+.|++++.++.+++|+.+.
T Consensus 374 LRGgaeqfieE~eRSlHDAImIVrralk-------n~~vVaGGGaiE-MElSk~lRd~S~ti~gK~q~~i~--------- 436 (543)
T KOG0361|consen 374 LRGGAEQFIEETERSLHDAIMIVRRALK-------NDSVVAGGGAIE-MELSKYLRDYSRTIAGKQQLFIN--------- 436 (543)
T ss_pred EeccHHHHHHHHhhhhhhHHHHHHHHhc-------cCcEeeCCceee-ehHHHHHHHhhcccCcHHHHHHH---------
Confidence 444568999999999999999999998 999999999999 99999999999999999999988
Q ss_pred hHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 550 VERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 550 ~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+|||+||+|||+|+++++++||..|++ |..|||||++++.+.|+.+.+||||..||++|+++
T Consensus 437 ---------A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~-G~~w~Gvdi~~e~i~dn~~~~VwEP~~VK~Nai~a 505 (543)
T KOG0361|consen 437 ---------AYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQ-GEKWYGVDINTEGIADNFEKFVWEPSIVKINAITA 505 (543)
T ss_pred ---------HHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhc-CCceeeeeecccchhhHHHhhccChHHHHHHHHHH
Confidence 6888999999999999999999999999999998 88999999999999999999999999999999974
No 30
>KOG0362|consensus
Probab=100.00 E-value=1.5e-41 Score=355.82 Aligned_cols=361 Identities=19% Similarity=0.247 Sum_probs=288.8
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH------hhcc----ccc------cCcc--------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV------NLKM----HKF------APDC-------- 277 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~------~~~~----~~~------l~v~-------- 277 (629)
.+||+++++++..+.|++++|||||+||.+.+|||.+|+.||+++ .-++ .+. +.++
T Consensus 77 v~HPaakllv~a~~~q~~~iGDgtnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~ 156 (537)
T KOG0362|consen 77 VEHPAAKLLVEATQMQEEEIGDGTNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDK 156 (537)
T ss_pred ccCcHHHHHHHHHHHHHHhhCCCceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccCh
Confidence 579999999999999999999999999999999999999999882 0000 000 0000
Q ss_pred ---cccccc--ccCCCHHHHHHHHHhCcEEEeccchh--hHHHHHHHhCCccccccc----ccCcCCCcccceEEEEEEc
Q psy14945 278 ---STSDRY--RTGIDPQSLDLFAREGIIALRRAKRR--NMERLSLACGGTAMNSVE----GLEPAHLGYAGSVFEHVLG 346 (629)
Q Consensus 278 ---~~~~l~--~k~i~~~~~~~la~~~I~vv~~v~~~--dl~rIak~tGg~i~~s~~----~l~~~~lG~~~~v~e~~i~ 346 (629)
..+++. +++-.|+..++.+++|+.+.+. ..+ |++|+|+++|+++.+|.. .+++...|.+.+..
T Consensus 157 ~~~~rs~i~skq~~~ed~l~~lVa~ac~si~p~-~~FnvdnIrVcKi~Gg~l~~S~Vv~GmVfkr~~eG~v~~ak----- 230 (537)
T KOG0362|consen 157 EWALRSVIMSKQYGNEDFLTKLVAKACVSILPL-MSFNVDNIRVCKILGGGLEDSCVVCGMVFKRDPEGEVKSAK----- 230 (537)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHhhccc-ccccccceEEEEEecCCcccceeeEEEEeccccCCcccccc-----
Confidence 002222 6777899999999999999988 434 899999999999999964 47778888874433
Q ss_pred CeeEEEEeecCC-----CccEEEEecCCCcc---------CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHH
Q psy14945 347 EEKFTFVEECKN-----PQSVTILLKGPNKH---------TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHAL 412 (629)
Q Consensus 347 ~~~~~~~~~~~~-----~~~~TIll~g~~~~---------~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L 412 (629)
+.++++|. |+. .+++|++|+.+.+. .+++..+.+.++.. ..||.||+..|++|+ |+
T Consensus 231 ~arvAvf~-cP~d~~~TEtkgTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gv--------kViV~~g~V~em~Lh-fl 300 (537)
T KOG0362|consen 231 DARVAVFA-CPFDIAQTETKGTVLLKNAKELLNFSKGEEALLEEQVKAIADAGV--------KVIVSGGKVDEMTLH-FL 300 (537)
T ss_pred cceeEEEe-cCCCcccccCcceeeecCcHhhhhhccccHHHHHHHHHHHHhcCC--------eEEEecCccchhhhh-hh
Confidence 67888887 652 37899999999954 56666677666542 458999999999996 99
Q ss_pred Hhhhh-hcCcchHHHHHHHHHHHhhhh-----HHHHHhcCC-ChHHHHH-------HHHHhhcCCCC--ceEEEEeccCC
Q psy14945 413 QNYKN-TVKGKSRLGIQAYAEALLIIP-----KTIAVNSGF-DAQDTLV-------KLQEACGEAPG--VAVGVDVNSGE 476 (629)
Q Consensus 413 ~~~~~-~i~~~~k~~i~~fa~ALe~ip-----~~L~~NaG~-d~~~vl~-------~L~~~~~~~~~--~~~Gid~~t~~ 476 (629)
++|+. -++-.++|.+++||+.+..+| .+..+..|+ |.+.+.+ .++.... ++ .++-++++|..
T Consensus 301 nky~ImVlqi~Sk~eLrrlcrtvGA~~l~rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~--~~~~~TvVLRgst~s 378 (537)
T KOG0362|consen 301 NKYKIMVLQINSKFDLRRLCRTVGATALPRLFPPAPEELGYCDSVSTQEIGDTLVVVFRWEST--GTRVATVVLRGATQS 378 (537)
T ss_pred ccccEEEEEeccHhhHHHHHHHcCCccchhccCCCCccccccceeeeeecCCceEEEEeeccC--CCceeEEEEcccchh
Confidence 99985 223338999999999998877 345555676 4333221 1121111 22 35667888999
Q ss_pred CCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHh
Q psy14945 477 VLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELAD 556 (629)
Q Consensus 477 i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 556 (629)
++|..||.|.|.+...+...+ +++++||+|++| +++++.|.+++.+.+|.+|++++
T Consensus 379 ~LDd~ERAVddgV~tyK~l~~-------d~rLlpGagatE-ieLak~i~~~g~~~~Gl~q~Aik---------------- 434 (537)
T KOG0362|consen 379 ILDDAERAVDDGVNTYKALCS-------DSRLLPGAGATE-IELAKQISSRGATLPGLKQLAIK---------------- 434 (537)
T ss_pred hHHHHHHHHHHhHHHhhhhcc-------CCccccCCchhH-HHHHHHHHHhcccCCCcchhHHH----------------
Confidence 999999999999998888776 999999999999 99999999999999999999998
Q ss_pred hhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCC-cccccccCCccccHHHHHHHhhc
Q psy14945 557 LLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSG-EVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 557 ~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g-~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
.|++||+.+|++||||||+++.+++++|++.|. ++.+.|+|++.+ .+.|+.+.||||.+.+|.|+|++
T Consensus 435 --~fa~Ale~~PktlaEnagl~~~evia~ly~~h~--~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~a~k~ 503 (537)
T KOG0362|consen 435 --KFAEALEVLPKTLAENAGLAVTEVIAKLYAVHQ--GGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQAIKL 503 (537)
T ss_pred --HHHHHhccccHhHHHhcCCcHHHHHHHHHHhhc--CCCcceeeeeccccccChhhhchHHHHHHHHHHHHH
Confidence 689999999999999999999999999999996 356789999887 58999999999999999999985
No 31
>KOG0362|consensus
Probab=100.00 E-value=6.5e-38 Score=328.51 Aligned_cols=353 Identities=22% Similarity=0.324 Sum_probs=312.1
Q ss_pred hhhhcccccchhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccccc
Q psy14945 108 LTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVK 187 (629)
Q Consensus 108 ~~~~~s~~~~~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~ 187 (629)
.++.+|+.+..++++...|.-+.+... |. ..+++++|+|+|+.|+++++|+++.|++|++... .-+++-+
T Consensus 161 rs~i~skq~~~ed~l~~lVa~ac~si~------p~--~~FnvdnIrVcKi~Gg~l~~S~Vv~GmVfkr~~e--G~v~~ak 230 (537)
T KOG0362|consen 161 RSVIMSKQYGNEDFLTKLVAKACVSIL------PL--MSFNVDNIRVCKILGGGLEDSCVVCGMVFKRDPE--GEVKSAK 230 (537)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHhhc------cc--ccccccceEEEEEecCCcccceeeEEEEeccccC--Ccccccc
Confidence 366689999988877777666665532 22 1168999999999999999999999999998753 2347788
Q ss_pred CeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHh
Q psy14945 188 NAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVN 267 (629)
Q Consensus 188 n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~ 267 (629)
.+||++++||++...+++++ ++.+++..++..+-..|.+.++.. +.-|. .
T Consensus 231 ~arvAvf~cP~d~~~TEtkg---------TvLi~~A~el~~FSKgEe~lle~~--------vk~Ia-------------~ 280 (537)
T KOG0362|consen 231 DARVAVFACPFDIAQTETKG---------TVLLKNAKELLNFSKGEEALLEEQ--------VKAIA-------------D 280 (537)
T ss_pred cceeEEEecCCCcccccCcc---------eeeecCcHhhhhhccccHHHHHHH--------HHHHH-------------h
Confidence 99999999999999999998 889999999999999998888887 66665 2
Q ss_pred hccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcC
Q psy14945 268 LKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGE 347 (629)
Q Consensus 268 ~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~ 347 (629)
.+. .+ +.+...+++..++|+.+.+|++++-.+++|++|+|+..||.+.+.+....+..+|+|.++..+++|+
T Consensus 281 ~gv----kV----iV~~g~V~em~Lhflnky~ImVlqi~Sk~eLrrlcrtvGA~~l~rl~~P~~~~lG~~d~V~~~EiG~ 352 (537)
T KOG0362|consen 281 AGV----KV----IVSGGKVDEMTLHFLNKYKIMVLQINSKFDLRRLCRTVGATALPRLFPPAPEELGYCDSVSTQEIGD 352 (537)
T ss_pred cCC----eE----EEecCccchhhhhhhccccEEEEEeccHhhHHHHHHHcCCccchhccCCCCccccccceeeeeecCC
Confidence 232 22 3467889999999999999999999999999999999999999999888888899999999999999
Q ss_pred eeEEEEe-ecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHH
Q psy14945 348 EKFTFVE-ECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLG 426 (629)
Q Consensus 348 ~~~~~~~-~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~ 426 (629)
..+++|. ++..+...|++|||+++..+++.||.++|+++..+...++++++||+|++|++|++.|.+|+..+++-.|+.
T Consensus 353 ~~v~vF~~e~~~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~~~Gl~q~A 432 (537)
T KOG0362|consen 353 TLVVVFRWESTGTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGATLPGLKQLA 432 (537)
T ss_pred ceEEEEeeccCCCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcccCCCcchhH
Confidence 9999886 455678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccC-CCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 427 IQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSG-EVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 427 i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~-~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
++.||+||+.+|++|++|+|.+..+++.+|...|. ++.+.|+|...+ ...|..+.+|||-+.+|+++++.|+++|..
T Consensus 433 ik~fa~Ale~~PktlaEnagl~~~evia~ly~~h~--~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~a~k~at~aa~t 510 (537)
T KOG0362|consen 433 IKKFAEALEVLPKTLAENAGLAVTEVIAKLYAVHQ--GGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQAIKLATEAALT 510 (537)
T ss_pred HHHHHHHhccccHhHHHhcCCcHHHHHHHHHHhhc--CCCcceeeeeccccccChhhhchHHHHHHHHHHHHHHHhhhhe
Confidence 99999999999999999999999999999998887 345678887755 589999999999999999999999999999
Q ss_pred CeEEe
Q psy14945 506 PRVIT 510 (629)
Q Consensus 506 ~~iV~ 510 (629)
...|+
T Consensus 511 vl~vD 515 (537)
T KOG0362|consen 511 VLTVD 515 (537)
T ss_pred eeehh
Confidence 88876
No 32
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.4e-37 Score=348.56 Aligned_cols=308 Identities=19% Similarity=0.292 Sum_probs=258.9
Q ss_pred chhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCC-------cccccCe
Q psy14945 117 EKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDM-------PKSVKNA 189 (629)
Q Consensus 117 ~~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m-------~~~i~n~ 189 (629)
..+.++.++++++..- |.. +.+.|.+.+| +..||++++|++|++++.+|+| |+.++||
T Consensus 153 ~~~~ls~lv~~Av~~v-~~~-------------g~i~i~~~~~-~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~ 217 (542)
T PRK00013 153 GDEEIGKLIAEAMEKV-GKE-------------GVITVEESKG-FETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENP 217 (542)
T ss_pred chHHHHHHHHHHHHHh-CcC-------------CcEEEEEcCC-CCceEEEEEeEEecCCcccccccccccCCeEEEecC
Confidence 3466788888887632 221 1367777777 8889999999999999999965 8889999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|+++|+.+.. ..+ ++ .. +..+. ..+
T Consensus 218 ~Ilv~d~~i~~----------------------~~~---l~--------~~--------l~~i~-------------~~g 243 (542)
T PRK00013 218 YILITDKKISN----------------------IQD---LL--------PV--------LEQVA-------------QSG 243 (542)
T ss_pred EEEEEcCccCC----------------------HHH---HH--------HH--------HHHHH-------------HhC
Confidence 99999997621 111 11 22 33333 122
Q ss_pred cccccCccccccccccCCCHHHHHHHHHhC------cEEEeccc-----hhhHHHHHHHhCCcccc-----cccccCcCC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFAREG------IIALRRAK-----RRNMERLSLACGGTAMN-----SVEGLEPAH 333 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~~------I~vv~~v~-----~~dl~rIak~tGg~i~~-----s~~~l~~~~ 333 (629)
. .+ ++++++|++.++++|..++ |.++++.+ +.+++|||++|||++++ ++..++.+.
T Consensus 244 ~----~l----vi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~ 315 (542)
T PRK00013 244 K----PL----LIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLED 315 (542)
T ss_pred C----CE----EEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHH
Confidence 1 11 3468999999999999997 88998775 67999999999999999 688888888
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCCc-----------------------------------cEEEEecCCCccCHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNPQ-----------------------------------SVTILLKGPNKHTLAQTK 378 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~~-----------------------------------~~TIll~g~~~~~l~e~~ 378 (629)
+|+|+.+++. .+++++|++|.++. .+||++||+++..++|.+
T Consensus 316 LG~~~~v~~~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~e 392 (542)
T PRK00013 316 LGQAKKVVVT---KDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKK 392 (542)
T ss_pred CCeeeEEEEe---cCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHH
Confidence 9999999854 47888998777654 688999999999999999
Q ss_pred HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHH
Q psy14945 379 DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQE 458 (629)
Q Consensus 379 r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~ 458 (629)
|+++||+++++++++++ +|||||++|++++.+|+++ ....+.+++++++|++||+.||++|++|+|+|+.+++.+|+.
T Consensus 393 r~i~Dal~~vk~al~~g-~VpGGGa~e~~~s~~L~~~-~~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~ 470 (542)
T PRK00013 393 DRVEDALHATRAAVEEG-IVPGGGVALLRAAPALEAL-KGLNGDEATGINIVLRALEAPLRQIAENAGLEGSVVVEKVKN 470 (542)
T ss_pred HHHHHHHHHHHHHHHcC-cccCcHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 99999999999999997 9999999999999999988 677888999999999999999999999999999999999988
Q ss_pred hhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 459 ACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 459 ~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.|. .++|+|+.++.+.|+.+.|||||+.||+++|+.|+++|...+.++
T Consensus 471 ~~~----~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id 518 (542)
T PRK00013 471 GKG----KGYGYNAATGEYVDMIEAGIIDPTKVTRSALQNAASVAGLLLTTE 518 (542)
T ss_pred hcC----CCEeEeCCCCceeehhhccCeecHHHHHHHHHHHHHHHHHHHHHH
Confidence 762 478999999999999999999999999999999999888776665
No 33
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=3.2e-37 Score=347.26 Aligned_cols=307 Identities=19% Similarity=0.261 Sum_probs=255.4
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccce-EEEEeEEEeccCCCCCC-------cccccCe
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCI-ILVKGVVLNHGARHPDM-------PKSVKNA 189 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS-~li~Gvv~~~~~~~~~m-------~~~i~n~ 189 (629)
++.++.++++|+.. .|.. + .|.+.+|+++.|| ++++|++|++++.+|+| |+.++||
T Consensus 166 ~~~l~~li~eAv~~-vg~~-------------g--~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~ 229 (555)
T PTZ00114 166 DVEIGSLIADAMDK-VGKD-------------G--TITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENP 229 (555)
T ss_pred hHHHHHHHHHHHHH-hCcC-------------C--cEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCC
Confidence 45677777777763 2321 0 2677889999998 89999999999999975 8899999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|+++|++|+. . .+ +... +..+. ..+
T Consensus 230 ~Ili~d~~L~~------~----------------~~-----------i~~~--------le~i~-------------~~~ 255 (555)
T PTZ00114 230 LILVTDKKISS------I----------------QS-----------ILPI--------LEHAV-------------KNK 255 (555)
T ss_pred EEEEEcCCCCC------H----------------HH-----------HHHH--------HHHHH-------------HhC
Confidence 99999999852 0 11 1111 22232 111
Q ss_pred cccccCccccccccccCCCHHHHHHHHHhC------cEEEec-----cchhhHHHHHHHhCCcccccc------cccCcC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFAREG------IIALRR-----AKRRNMERLSLACGGTAMNSV------EGLEPA 332 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~~------I~vv~~-----v~~~dl~rIak~tGg~i~~s~------~~l~~~ 332 (629)
. .+ ++++++|++.++++|..++ |.++++ +++++++|||+.|||+++++. ..+++.
T Consensus 256 ~----~l----lI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~ 327 (555)
T PTZ00114 256 R----PL----LIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPS 327 (555)
T ss_pred C----CE----EEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHH
Confidence 1 11 3458899999999999996 888977 456899999999999999997 667778
Q ss_pred CCcccceEEEEEEcCeeEEEEeecC-----------------------------------CCccEEEEecCCCccCHHHH
Q psy14945 333 HLGYAGSVFEHVLGEEKFTFVEECK-----------------------------------NPQSVTILLKGPNKHTLAQT 377 (629)
Q Consensus 333 ~lG~~~~v~e~~i~~~~~~~~~~~~-----------------------------------~~~~~TIll~g~~~~~l~e~ 377 (629)
.+|+|+.+++.+ .+++++++|. .+..+||++||+++..++|.
T Consensus 328 ~LG~a~~v~~~~---~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~ 404 (555)
T PTZ00114 328 MLGSAKKVTVTK---DETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEK 404 (555)
T ss_pred HcCCCceEEEEe---ceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHH
Confidence 899999999765 4566666554 45789999999999999999
Q ss_pred HHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh--hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHH
Q psy14945 378 KDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN--TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVK 455 (629)
Q Consensus 378 ~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~--~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~ 455 (629)
+|+++||+++++++++++ +|||||++|++++.+|++++. ..++.+++++++|++||+.||++|++|+|+|+.+++.+
T Consensus 405 ~r~i~Dal~~~k~a~~~g-vVpGGGa~e~~~s~~L~~~~~~~~~~~~~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~ 483 (555)
T PTZ00114 405 KDRIEDALNATRAAVEEG-IVPGGGVALLRASKLLDKLEEDNELTPDQRTGVKIVRNALRLPTKQIAENAGVEGAVVVEK 483 (555)
T ss_pred HHHHHHHHHHHHHHHhcC-cccCCcHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 999999999999999988 999999999999999998875 57788999999999999999999999999999999999
Q ss_pred HHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 456 LQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 456 L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
|+. . ++.++|+|+.+|++.|+.+.|||||+.||+++++.|+++|...+.++
T Consensus 484 l~~--~--~~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~A~~iL~id 534 (555)
T PTZ00114 484 ILE--K--KDPSFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAASVASLMLTTE 534 (555)
T ss_pred HHh--c--CCCCEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHHHHHHHHhHH
Confidence 976 1 34579999999999999999999999999999999999888877665
No 34
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=7.9e-37 Score=341.59 Aligned_cols=304 Identities=21% Similarity=0.317 Sum_probs=255.2
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccc-eEEEEeEEEeccCCCCCC---c----ccccCe
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVC-IILVKGVVLNHGARHPDM---P----KSVKNA 189 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~d-S~li~Gvv~~~~~~~~~m---~----~~i~n~ 189 (629)
.+.++.++++|+.. .|.. +.+. ..+|++..| |++++|++|++++.+|+| | ++++||
T Consensus 152 ~~~l~~lv~~A~~~-v~~~-------------~~i~--v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~ 215 (520)
T cd03344 152 DEEIGELIAEAMEK-VGKD-------------GVIT--VEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENP 215 (520)
T ss_pred hHHHHHHHHHHHHH-hccC-------------CcEE--EEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCC
Confidence 57788888888874 2221 1122 358999999 799999999999999875 3 679999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|+++|++|.. ..++.+ . +..+. ..+
T Consensus 216 ~Ili~d~~l~~----------------------~~~l~~-----------~--------l~~i~-------------~~~ 241 (520)
T cd03344 216 YILLTDKKISS----------------------IQELLP-----------I--------LELVA-------------KAG 241 (520)
T ss_pred EEEEECCCCCC----------------------HHHHHH-----------H--------HHHHH-------------hhC
Confidence 99999999731 111111 1 33333 112
Q ss_pred cccccCccccccccccCCCHHHHHHHHHhCc------EEEecc-----chhhHHHHHHHhCCcccc-----cccccCcCC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFAREGI------IALRRA-----KRRNMERLSLACGGTAMN-----SVEGLEPAH 333 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I------~vv~~v-----~~~dl~rIak~tGg~i~~-----s~~~l~~~~ 333 (629)
. .+ ++++++|++.++++|..+++ .++++. ++++++|||+.|||++++ ++..++++.
T Consensus 242 ~----~l----vi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~ 313 (520)
T cd03344 242 R----PL----LIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLED 313 (520)
T ss_pred C----CE----EEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHH
Confidence 1 11 34689999999999999999 888765 677999999999999999 677788888
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCC-----------------------------------ccEEEEecCCCccCHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNP-----------------------------------QSVTILLKGPNKHTLAQTK 378 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~-----------------------------------~~~TIll~g~~~~~l~e~~ 378 (629)
+|+|+.+++.+ .+++++.+|..+ ..|||+|||+++.+++|.+
T Consensus 314 LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~ 390 (520)
T cd03344 314 LGRAKKVVVTK---DDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKK 390 (520)
T ss_pred CCcceEEEEee---ceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHH
Confidence 99999998644 788888877664 4899999999999999999
Q ss_pred HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHH
Q psy14945 379 DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQE 458 (629)
Q Consensus 379 r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~ 458 (629)
|+++||+++++++++++ +|||||++|++++.+|++++. .++.+++++++|++||+.||++|++|+|+|+.+++++|+.
T Consensus 391 r~i~Dal~~~k~a~~~g-~VpGGGa~e~~~s~~L~~~~~-~~~~~~~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~ 468 (520)
T cd03344 391 DRVEDALNATRAAVEEG-IVPGGGVALLRASPALDKLKA-LNGDEKLGIEIVRRALEAPLRQIAENAGVDGSVVVEKVLE 468 (520)
T ss_pred HHHHHHHHHHHHHHhcC-CCcCCcHHHHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 99999999999999998 999999999999999999887 8889999999999999999999999999999999999987
Q ss_pred hhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEE
Q psy14945 459 ACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVI 509 (629)
Q Consensus 459 ~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV 509 (629)
.|. ++|+|+.+|++.|+.+.|||||+.||.++++.|+++|...+.+
T Consensus 469 ~~~-----~~G~d~~~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~iL~i 514 (520)
T cd03344 469 SPD-----GFGYDAATGEYVDMIEAGIIDPTKVVRSALQNAASVASLLLTT 514 (520)
T ss_pred hcC-----CEeEECCCCcccchHhccCeecHHHHHHHHHHHHHHHHHHHhh
Confidence 663 6899999999999999999999999999999999988766544
No 35
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.6e-37 Score=344.46 Aligned_cols=306 Identities=19% Similarity=0.276 Sum_probs=255.5
Q ss_pred chhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccc-eEEEEeEEEeccCCCCC-------CcccccC
Q psy14945 117 EKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVC-IILVKGVVLNHGARHPD-------MPKSVKN 188 (629)
Q Consensus 117 ~~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~d-S~li~Gvv~~~~~~~~~-------m~~~i~n 188 (629)
..+.++.++++++... |.. +.+.+ ..|++..| |++++|++|++++.+|+ ||++++|
T Consensus 153 ~~~~l~~lv~~Av~~v-~~~-------------g~i~i--~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n 216 (542)
T PRK12849 153 GDEEIGELIAEAMEKV-GKD-------------GVITV--EESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLED 216 (542)
T ss_pred ChHHHHHHHHHHHHHh-ccC-------------CcEeE--EeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeC
Confidence 3567888888888742 221 12233 26999887 89999999999999996 4889999
Q ss_pred eeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhh
Q psy14945 189 AHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNL 268 (629)
Q Consensus 189 ~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~ 268 (629)
|+|+++|+.++. .+++.+ . +..+. ..
T Consensus 217 ~~Ili~d~~i~~----------------------~~~~~~-----------~--------l~~i~-------------~~ 242 (542)
T PRK12849 217 PLILLTDKKISS----------------------LQDLLP-----------L--------LEKVA-------------QS 242 (542)
T ss_pred cEEEeecCCcCC----------------------HHHHHH-----------H--------HHHHH-------------Hh
Confidence 999999996631 111111 1 33333 11
Q ss_pred ccccccCccccccccccCCCHHHHHHHHHh------CcEEEeccc-----hhhHHHHHHHhCCcccc-----cccccCcC
Q psy14945 269 KMHKFAPDCSTSDRYRTGIDPQSLDLFARE------GIIALRRAK-----RRNMERLSLACGGTAMN-----SVEGLEPA 332 (629)
Q Consensus 269 ~~~~~l~v~~~~~l~~k~i~~~~~~~la~~------~I~vv~~v~-----~~dl~rIak~tGg~i~~-----s~~~l~~~ 332 (629)
+. . .++++++|++.++++|.++ +|.++++.+ +.+++|||++|||++++ +++.+++.
T Consensus 243 ~~----~----lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~ 314 (542)
T PRK12849 243 GK----P----LLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLD 314 (542)
T ss_pred CC----C----EEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHH
Confidence 21 1 1356899999999999999 999999876 34699999999999999 57778888
Q ss_pred CCcccceEEEEEEcCeeEEEEeecCCC-----------------------------------ccEEEEecCCCccCHHHH
Q psy14945 333 HLGYAGSVFEHVLGEEKFTFVEECKNP-----------------------------------QSVTILLKGPNKHTLAQT 377 (629)
Q Consensus 333 ~lG~~~~v~e~~i~~~~~~~~~~~~~~-----------------------------------~~~TIll~g~~~~~l~e~ 377 (629)
.+|+|+.+++ ++++++++++|.++ ..+||+|||+++..++|.
T Consensus 315 ~LG~~~~v~~---~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~ 391 (542)
T PRK12849 315 DLGRAKRVTI---TKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKER 391 (542)
T ss_pred HCceeeEEEE---eeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHH
Confidence 8999999985 45888888877664 379999999999999999
Q ss_pred HHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHH
Q psy14945 378 KDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQ 457 (629)
Q Consensus 378 ~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~ 457 (629)
+|+++||+++++++++++ +|||||++|++++.+|++++ .+++.+++++++|++||+.||++|++|+|+|+.+++++|+
T Consensus 392 er~i~DAl~~~~~a~~~g-~VpGGGa~e~~ls~~L~~~~-~~~g~~~~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~ 469 (542)
T PRK12849 392 KDRVEDALNATRAAVEEG-IVPGGGVALLRAAKALDELA-GLNGDQAAGVEIVRRALEAPLRQIAENAGLDGSVVVAKVL 469 (542)
T ss_pred HHHHHHHHHHHHHHHHcC-eecCCCHHHHHHHHHHHHhh-CCChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 999999999999999998 99999999999999999998 8888999999999999999999999999999999999998
Q ss_pred HhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 458 EACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 458 ~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
..| .++|+|+.++++.|+.+.|||||+.+|.++++.|+++|...+.++
T Consensus 470 ~~~-----~~~G~d~~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~iL~id 517 (542)
T PRK12849 470 ELE-----DGFGFNAATGEYGDLIAAGIIDPVKVTRSALQNAASVAGLLLTTE 517 (542)
T ss_pred hhC-----CCcceeCCCCccccHHhccCccCHHHHHHHHHHHHHHHHHHHhHH
Confidence 765 258999999999999999999999999999999999888776654
No 36
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.4e-36 Score=340.80 Aligned_cols=307 Identities=18% Similarity=0.280 Sum_probs=257.0
Q ss_pred chhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCC-------CcccccCe
Q psy14945 117 EKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPD-------MPKSVKNA 189 (629)
Q Consensus 117 ~~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~-------m~~~i~n~ 189 (629)
..+.++.++++++.. .|.. +.++|.+.. ++..++++++|++|++++.+|+ ||++++||
T Consensus 154 ~~~~l~~lv~~Av~~-vg~~-------------g~i~i~~~~-~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~ 218 (541)
T PRK12851 154 GDAEIGRLVAEAMEK-VGNE-------------GVITVEESK-TAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDP 218 (541)
T ss_pred ChHHHHHHHHHHHHH-hccc-------------CceEEEEcc-CCCcceEEEEEEEecCCccccccccCCCCCeEEeccc
Confidence 356788888888873 2321 124555555 6788899999999999999996 99999999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|+++|++++. ... +... +..+. ..+
T Consensus 219 ~Ilv~d~~i~~-------------------------~~~--------i~~~--------l~~i~-------------~~~ 244 (541)
T PRK12851 219 YILIHEKKISN-------------------------LQD--------LLPV--------LEAVV-------------QSG 244 (541)
T ss_pred EEEEEcCCcCc-------------------------HHH--------HHHH--------HHHHH-------------HhC
Confidence 99999998631 011 1122 33333 112
Q ss_pred cccccCccccccccccCCCHHHHHHHHHhCc------EEEec-----cchhhHHHHHHHhCCcccc-----cccccCcCC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFAREGI------IALRR-----AKRRNMERLSLACGGTAMN-----SVEGLEPAH 333 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I------~vv~~-----v~~~dl~rIak~tGg~i~~-----s~~~l~~~~ 333 (629)
. . .++++++|++.++++|..+++ .++++ +++.+++||+++|||++++ ++..+++..
T Consensus 245 ~----~----lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~ 316 (541)
T PRK12851 245 K----P----LLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQ 316 (541)
T ss_pred c----C----EEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHH
Confidence 1 1 134689999999999999997 78886 7788999999999999999 577788888
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCCc-----------------------------------cEEEEecCCCccCHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNPQ-----------------------------------SVTILLKGPNKHTLAQTK 378 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~~-----------------------------------~~TIll~g~~~~~l~e~~ 378 (629)
+|+|+.+++.+ ++++++.+|+++. .+||++||+++.+++|.+
T Consensus 317 LG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~e 393 (541)
T PRK12851 317 LGRAKKVVVEK---ENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKK 393 (541)
T ss_pred cCCccEEEEEc---ceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHH
Confidence 99999998644 7888888776642 789999999999999999
Q ss_pred HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHH
Q psy14945 379 DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQE 458 (629)
Q Consensus 379 r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~ 458 (629)
|+++||+++++++++++ +|||||++|++++.+|++++.. .+.+++++++|++||+.||++|++|+|+|+.+++.+|+.
T Consensus 394 r~i~DAl~a~~~al~~g-~VpGGGa~e~~~s~~L~~~~~~-~~~~~~~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~ 471 (541)
T PRK12851 394 DRVDDALHATRAAVEEG-IVPGGGVALLRAVKALDKLETA-NGDQRTGVEIVRRALEAPVRQIAENAGAEGSVVVGKLRE 471 (541)
T ss_pred HHHHHHHHHHHHHHHcC-cccCchHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 99999999999999998 9999999999999999988765 788999999999999999999999999999999999987
Q ss_pred hhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 459 ACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 459 ~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.|. ++|+|+.++++.|+.+.|||||+.||+++++.|+++|...+.++
T Consensus 472 ~~~-----~~G~d~~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~iL~id 518 (541)
T PRK12851 472 KPG-----GYGFNAATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLLLTTE 518 (541)
T ss_pred hCC-----CeeeeCCCCCccchhhccCEecHHHHHHHHHHHHHHHHHHHhHH
Confidence 652 58999999999999999999999999999999999888876665
No 37
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.8e-36 Score=336.69 Aligned_cols=306 Identities=19% Similarity=0.279 Sum_probs=251.8
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCC-------cccccCee
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDM-------PKSVKNAH 190 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m-------~~~i~n~k 190 (629)
.+.++.++++|+.. .|.. +.+.+.... ..-.++++++|++|++++.+|+| |++++||+
T Consensus 155 ~~~l~~lv~eAv~~-vg~~-------------g~i~v~~~~-~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~ 219 (544)
T PRK12850 155 DESIGEMIAEAMDK-VGKE-------------GVITVEEAK-TLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPY 219 (544)
T ss_pred HHHHHHHHHHHHHH-hccc-------------CceeeEEcc-ccCcceEEEEeEEecCccCcCccccccccCeEEEeCCE
Confidence 46688888888874 2321 112222211 12268999999999999999975 88899999
Q ss_pred EEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc
Q psy14945 191 ILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM 270 (629)
Q Consensus 191 Ill~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~ 270 (629)
|+++|+.++. +.. +... +..+. ..+.
T Consensus 220 Ill~d~~i~~-------------------------~~~--------i~~~--------l~~i~-------------~~g~ 245 (544)
T PRK12850 220 ILLHEKKISN-------------------------LQD--------LLPI--------LEAVV-------------QSGR 245 (544)
T ss_pred EEEEecccCC-------------------------HHH--------HHHH--------HHHHH-------------HhCC
Confidence 9999996621 111 1122 33333 1121
Q ss_pred ccccCccccccccccCCCHHHHHHHHHhCc------EEEec-----cchhhHHHHHHHhCCcccc-----cccccCcCCC
Q psy14945 271 HKFAPDCSTSDRYRTGIDPQSLDLFAREGI------IALRR-----AKRRNMERLSLACGGTAMN-----SVEGLEPAHL 334 (629)
Q Consensus 271 ~~~l~v~~~~~l~~k~i~~~~~~~la~~~I------~vv~~-----v~~~dl~rIak~tGg~i~~-----s~~~l~~~~l 334 (629)
.+ ++++++|++.++++|..++| .++++ +++.+++|||++|||++++ +++.+++..+
T Consensus 246 ----~l----vI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~L 317 (544)
T PRK12850 246 ----PL----LIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDML 317 (544)
T ss_pred ----CE----EEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHc
Confidence 11 34688999999999999999 89887 6788999999999999999 6777888889
Q ss_pred cccceEEEEEEcCeeEEEEeecCCCc-----------------------------------cEEEEecCCCccCHHHHHH
Q psy14945 335 GYAGSVFEHVLGEEKFTFVEECKNPQ-----------------------------------SVTILLKGPNKHTLAQTKD 379 (629)
Q Consensus 335 G~~~~v~e~~i~~~~~~~~~~~~~~~-----------------------------------~~TIll~g~~~~~l~e~~r 379 (629)
|+|+.+++. +++++++.+|.++. .+||+|||+++.+++|.+|
T Consensus 318 G~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er 394 (544)
T PRK12850 318 GRAKRVLIT---KENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKD 394 (544)
T ss_pred CCCcEEEEE---eeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHH
Confidence 999999854 37888998777643 7999999999999999999
Q ss_pred HHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHh
Q psy14945 380 AVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEA 459 (629)
Q Consensus 380 ~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~ 459 (629)
+++||+++++++++++ +|||||++|++++.+|+++ ....+.+++++++|++||+.||++|++|+|+|+.+++++|+..
T Consensus 395 ~i~DAl~~~k~a~~~g-~VpGGGa~e~~~s~~L~~~-~~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~ 472 (544)
T PRK12850 395 RVDDALHATRAAVEEG-IVPGGGVALLRARSALRGL-KGANADETAGIDIVRRALEEPLRQIATNAGFEGSVVVGKVAEL 472 (544)
T ss_pred HHHHHHHHHHHHHhcC-CccCCcHHHHHHHHHHHhc-cCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence 9999999999999997 9999999999999999988 5678889999999999999999999999999999999999876
Q ss_pred hcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 460 CGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 460 ~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
|. ++|+|+.++.+.|+.+.||+||+.||+++++.|+++|...+.++
T Consensus 473 ~~-----~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id 518 (544)
T PRK12850 473 PG-----NFGFNAQTGEYGDMVEAGIIDPAKVTRTALQDAASIAALLITTE 518 (544)
T ss_pred CC-----CcceeCCCCcccchhhccCcccHHHHHHHHHHHHHHHHHHHhHH
Confidence 53 57999999999999999999999999999999999888876665
No 38
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.1e-36 Score=337.83 Aligned_cols=306 Identities=20% Similarity=0.254 Sum_probs=252.9
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCc-cceEEEEeEEEeccCCCCC-------CcccccCe
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD-VCIILVKGVVLNHGARHPD-------MPKSVKNA 189 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~-~dS~li~Gvv~~~~~~~~~-------m~~~i~n~ 189 (629)
++.++.++++++.. .|.. +.+.+. .|++. .+|++++|+.|++++.+|+ |+..++||
T Consensus 155 ~~~l~~li~eA~~~-vg~~-------------g~i~v~--~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~ 218 (545)
T PRK12852 155 DAAIGKMIAQAMQK-VGNE-------------GVITVE--ENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDA 218 (545)
T ss_pred hHHHHHHHHHHHHH-hccC-------------Cceeee--cCCCcceEEEEEEeEEecCCccCCccccccccceEEecCc
Confidence 46677777777763 2321 122332 37776 7899999999999999996 88999999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|+++++.+.. .+ .+... +..+. ..+
T Consensus 219 ~Ili~d~~i~~----------------------~~-----------~i~~~--------l~~i~-------------~~g 244 (545)
T PRK12852 219 YILLHEKKLSG----------------------LQ-----------AMLPV--------LEAVV-------------QSG 244 (545)
T ss_pred eEEEecCccCC----------------------HH-----------HHHHH--------HHHHH-------------HhC
Confidence 99999886521 01 11112 33333 112
Q ss_pred cccccCccccccccccCCCHHHHHHHHHh------CcEEEeccc-----hhhHHHHHHHhCCcccc-----cccccCcCC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFARE------GIIALRRAK-----RRNMERLSLACGGTAMN-----SVEGLEPAH 333 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~------~I~vv~~v~-----~~dl~rIak~tGg~i~~-----s~~~l~~~~ 333 (629)
. .+ ++++++|++.++++|..+ +|.++++.+ +.+++|||++|||++++ ++.++++..
T Consensus 245 ~----~l----vI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~ 316 (545)
T PRK12852 245 K----PL----LIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKM 316 (545)
T ss_pred c----CE----EEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHH
Confidence 1 11 345889999999999986 799998654 77999999999999999 677888889
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCC-----------------------------------ccEEEEecCCCccCHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNP-----------------------------------QSVTILLKGPNKHTLAQTK 378 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~-----------------------------------~~~TIll~g~~~~~l~e~~ 378 (629)
+|+|+.+++.+ .+++++.++..+ ..+||+|||+++.+++|.+
T Consensus 317 lG~~~~v~~~~---~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~e 393 (545)
T PRK12852 317 LGRAKKVVIDK---ENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKK 393 (545)
T ss_pred CCCCcEEEEEc---cEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHH
Confidence 99999988544 688888776653 6789999999999999999
Q ss_pred HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHH
Q psy14945 379 DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQE 458 (629)
Q Consensus 379 r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~ 458 (629)
|+++||+++++++++++ +|||||++|++++.+|.+++.. .+.+|+++++|++||+.||++|++|+|+|+.+++++|+.
T Consensus 394 r~i~DAl~a~~~a~~~g-~VpGGGa~e~~~s~~L~~~~~~-~~~~q~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~ 471 (545)
T PRK12852 394 DRVEDALNATRAAVQEG-IVPGGGVALLRAKKAVGRINND-NADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILE 471 (545)
T ss_pred HHHHHHHHHHHHHHhcC-CCcCchHHHHHHHHHHHHhhcC-CcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 99999999999999997 9999999999999999988766 677999999999999999999999999999999999987
Q ss_pred hhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 459 ACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 459 ~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.|. .++|+|+.++++.|+.+.|||||+.||+++++.|+++|...+.++
T Consensus 472 ~~~----~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id 519 (545)
T PRK12852 472 NKS----ETFGFDAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTE 519 (545)
T ss_pred hcC----CCeeEeCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHHHHhHH
Confidence 663 478999999999999999999999999999999999988877765
No 39
>KOG0357|consensus
Probab=100.00 E-value=5.9e-38 Score=314.92 Aligned_cols=288 Identities=29% Similarity=0.395 Sum_probs=257.0
Q ss_pred cccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH------hhccccc-------cCcc------------
Q psy14945 223 QHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV------NLKMHKF-------APDC------------ 277 (629)
Q Consensus 223 ~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~------~~~~~~~-------l~v~------------ 277 (629)
.|+.+++++.-+..|+.++|||||.|+.+.+.++.+|..|+..+ .-++... +.-|
T Consensus 71 d~~IakLmv~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~ef~emi~~ 150 (400)
T KOG0357|consen 71 VHQIAKLIVILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFEFEEMIQQ 150 (400)
T ss_pred chHHHHHHHHhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhcccccHHHHHHH
Confidence 35899999999999999999999999999999999999998661 0011000 0001
Q ss_pred -----ccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEc--CeeE
Q psy14945 278 -----STSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG--EEKF 350 (629)
Q Consensus 278 -----~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~--~~~~ 350 (629)
+..++||+|++|.+.++|.+++..+++|+.-.+++-|+..|||++++.+.+++++.+|+++.+.|.+++ ++++
T Consensus 151 vK~~ga~l~icqwgfddeanhll~~n~lpavrwVGGpEiEliAiaT~grIVprF~eL~~~kLG~aglVrE~sfgttkdkm 230 (400)
T KOG0357|consen 151 IKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVREISFGTTKDKM 230 (400)
T ss_pred HHhhCCcEEEEecccCchhhhHHhhcCCCceeecCCcceEEEEeecCCeeeccHhhhCHhhccccceEEEEecccccceE
Confidence 013678999999999999999999999999999999999999999999999999999999999999987 6899
Q ss_pred EEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHH
Q psy14945 351 TFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAY 430 (629)
Q Consensus 351 ~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~f 430 (629)
.+++.|++++..||.+||.++.+++|.+|+++||+|++|++++|.+||.|||+.|+.++-.+.+.+.++++.+|+.+++|
T Consensus 231 lviEqc~nskaVTifvRg~Nkmii~EakrslhdalCvirnlird~rivYgGGaaEiscslav~~ead~~~g~eqya~raf 310 (400)
T KOG0357|consen 231 LVIEQCKNSKAVTIFVRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKIPGIEQYAFRAF 310 (400)
T ss_pred EEEEecCCCceEEEEEecCcceeHHHHHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhHhhccCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 431 AEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 431 a~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
|+||++||..|++|+|+++++.+++++..+...+++..|+|+.-..--||.+.+++|++.-|++.+..|+..+.+.+-++
T Consensus 311 a~ale~ipmalaensgl~pi~~ls~~ka~q~~~~~~~lGidcl~~G~nDMk~~~vie~l~~KkqQi~laTQ~vrMiLKid 390 (400)
T KOG0357|consen 311 ADALESIPMALAENSGLDPIETLSDVKARQVKEMNPALGIDCLHKGTNDMKEQHVIETLIGKKQQISLATQMVRMILKID 390 (400)
T ss_pred HHHHhhcchhhhhccCCCchhhhhHhHHHHHHhcCcccCcchhccCchhhhhhccHHHhhhhHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999886665466789999876666899999999999999999998888776655443
No 40
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.5e-37 Score=345.38 Aligned_cols=371 Identities=18% Similarity=0.198 Sum_probs=260.7
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-------c--cccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-------K--MHKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-------~--~~~~ 273 (629)
..||+++|+++.++.|++++|||||+|+.++++||++|..|++++ .+ . .+..
T Consensus 60 ~~hP~akll~~~a~~qd~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 139 (517)
T TIGR02342 60 VIHPAAKMLVELSKAQDIEAGDGTTSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREI 139 (517)
T ss_pred ccChHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHH
Confidence 479999999999999999999999999999999999999999861 00 0 0111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccc--------hhhHHHHHHHhCCccccccc----ccCcCCC---cccc
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK--------RRNMERLSLACGGTAMNSVE----GLEPAHL---GYAG 338 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~--------~~dl~rIak~tGg~i~~s~~----~l~~~~l---G~~~ 338 (629)
+..++.+++++|.+ ....++|++.++.++..+. ..+++++.+..|+++.+|.. .++.... +..+
T Consensus 140 l~~va~tsl~sK~~-~~~~~~ls~l~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds~li~Givl~k~~~~~~~mpk 218 (517)
T TIGR02342 140 LIKSATTSLSSKVV-SQYSSLLAPLAVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDTELIEGLVFTQKASRSAGGPT 218 (517)
T ss_pred HHHHHHHHhccccc-hhHHHHHHHHHHHHHHHHhccccCCccCHHHeeEEeccCCChhhcEEEeeEEEeccccccCCCCc
Confidence 22233355666644 3455666666665554442 13577888899999988842 1332221 3333
Q ss_pred eEEEEEEcCeeEEEEeecCC-----CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCCh-----HHH
Q psy14945 339 SVFEHVLGEEKFTFVEECKN-----PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGA-----FEV 406 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~~-----~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~-----~El 406 (629)
. +.+.+++++. |+- ....++++..+.++ .+++..+.+...+..+..... +.|+..+|. .++
T Consensus 219 ~-----i~n~kI~ll~-~~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~-~lvi~~~~I~~~~l~~l 291 (517)
T TIGR02342 219 R-----IEKAKIGLIQ-FQISPPKTDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGC-NVLLIQKSILRDAVNDL 291 (517)
T ss_pred c-----ccCCcEEEEe-cCCCCCcccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEECCCcccccccHH
Confidence 3 4578888775 321 13567777655432 233334555555554543322 456677776 677
Q ss_pred HHHHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHH-H----HHhcCCC-hHHHHH----HHHH-hhcCC--CCceEEEEe
Q psy14945 407 AAWHALQNYKN-TVKGKSRLGIQAYAEALLIIPKT-I----AVNSGFD-AQDTLV----KLQE-ACGEA--PGVAVGVDV 472 (629)
Q Consensus 407 ~l~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-L----~~NaG~d-~~~vl~----~L~~-~~~~~--~~~~~Gid~ 472 (629)
+++ ||.+++. .+....+..++++|++....+-. + .+..|.. .++..+ .+.. ..... +..++-+++
T Consensus 292 ~~~-~l~~~~I~av~~v~~~~LerIa~~tGa~ii~~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~~~~~tIllrG 370 (517)
T TIGR02342 292 ALH-FLAKMKIMVVKDIEREEVEFICKTIGCKPIASIDHFTADKLGSAELVEEVTTDGGKIIKITGIQNAGKTVTVLLRG 370 (517)
T ss_pred HHH-HHhhCCceEEecCCHHHHHHHHHHHCCEEEcchhhcCcccCcCCceEEEEEECCeEEEEEEccCCCCceEEEEEeC
Confidence 775 8877664 55566789999999886544311 0 1112321 111000 0000 00000 011344577
Q ss_pred ccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHH
Q psy14945 473 NSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVER 552 (629)
Q Consensus 473 ~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~ 552 (629)
.|..++++.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+.++.+|++++
T Consensus 371 ~t~~~l~E~er~i~DAl~~v~~~~~-------~~~~VpGGGa~e-~~ls~~l~~~~~~~~~~~~~~i~------------ 430 (517)
T TIGR02342 371 SNKLVIDEAERSLHDALCVIRSLVK-------KRGLIPGGGAPE-IEIAIKLSKLARTMKGVESYCVR------------ 430 (517)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhh-------CCCEEECcCHHH-HHHHHHHHHHHhcCCcHHHHHHH------------
Confidence 7889999999999999999999997 899999999999 99999999998888999999998
Q ss_pred HHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 553 ELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 553 ~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++|+..|++ ++.++|+|+.+|+++||.+.|||||+.||+++|++
T Consensus 431 ------~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~ai~~ 499 (517)
T TIGR02342 431 ------AFADALEVIPYTLAENAGLNPIDVVTELRNRHAN-GEKYAGISVRKGGITDMLEEEVLQPLLVTTSAVTL 499 (517)
T ss_pred ------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-CCCccceecCCCCccchhhccceEcHHHHHHHHHH
Confidence 5778888899999999999999999999999987 56789999999999999999999999999999974
No 41
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=1e-35 Score=333.23 Aligned_cols=305 Identities=19% Similarity=0.249 Sum_probs=250.8
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCc-cceEEEEeEEEeccCCCCCC-------cccccCe
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD-VCIILVKGVVLNHGARHPDM-------PKSVKNA 189 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~-~dS~li~Gvv~~~~~~~~~m-------~~~i~n~ 189 (629)
.+.++.++++++.. .|.. +.+.|. .|++. .+|++++|++|++++.+|+| ++.++||
T Consensus 153 ~~~l~~lv~~A~~~-v~~~-------------~~i~v~--~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~ 216 (524)
T TIGR02348 153 DEEIGSLIAEAMEK-VGKD-------------GVITVE--ESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENP 216 (524)
T ss_pred hHHHHHHHHHHHHH-hCcC-------------CcEeee--cCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCc
Confidence 46678888887763 2221 123333 36666 66999999999999999975 8889999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|+++++.++. ..+ + ... +..+. ..+
T Consensus 217 ~Ili~d~~i~~----------------------~~~---i--------~~~--------l~~i~-------------~~g 242 (524)
T TIGR02348 217 YILITDKKISN----------------------IKD---L--------LPL--------LEKVA-------------QSG 242 (524)
T ss_pred eeeeccCCcCC----------------------HHH---H--------HHH--------HHHHH-------------HhC
Confidence 99999997631 111 1 112 33333 112
Q ss_pred cccccCccccccccccCCCHHHHHHHHHh------CcEEEeccch-----hhHHHHHHHhCCcccc-----cccccCcCC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFARE------GIIALRRAKR-----RNMERLSLACGGTAMN-----SVEGLEPAH 333 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~------~I~vv~~v~~-----~dl~rIak~tGg~i~~-----s~~~l~~~~ 333 (629)
. .+ ++++++|++.++++|..+ +|.++++.+. .+++|||++|||++++ ++..++++.
T Consensus 243 ~----~l----vi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~ 314 (524)
T TIGR02348 243 K----PL----LIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDD 314 (524)
T ss_pred c----CE----EEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHH
Confidence 1 11 346899999999999987 8899987743 6899999999999999 788888889
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCCc-----------------------------------cEEEEecCCCccCHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNPQ-----------------------------------SVTILLKGPNKHTLAQTK 378 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~~-----------------------------------~~TIll~g~~~~~l~e~~ 378 (629)
+|+|+.+++. +++++++.+|.++. .+||++||+++..++|.+
T Consensus 315 LG~~~~v~~~---~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~e 391 (524)
T TIGR02348 315 LGKAKKVTVD---KDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKK 391 (524)
T ss_pred CCCceEEEEe---ecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHH
Confidence 9999999854 37888887776543 588999999999999999
Q ss_pred HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHH
Q psy14945 379 DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQE 458 (629)
Q Consensus 379 r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~ 458 (629)
|+++||+++++++++++ +|||||++|++++.+|++ .....+.+++++++|++||+.||++|++|+|+|+.+++++|+.
T Consensus 392 r~i~Dal~~~r~a~~~g-~VpGGGa~e~~~s~~L~~-~~~~~~~~~~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~ 469 (524)
T TIGR02348 392 LRVEDALNATRAAVEEG-IVPGGGVALLRAAAALEG-LKGDNEDEAIGIDIVKRALEAPLRQIAENAGKDGAVVAEKVKE 469 (524)
T ss_pred HHHHHHHHHHHHHHhcC-CccCCcHHHHHHHHHHHH-hccCChHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 99999999999999998 999999999999999988 5677888999999999999999999999999999999999976
Q ss_pred hhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 459 ACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 459 ~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
. . + .+|+|+.++.+.|+.+.|||||+.||+++++.|+++|...+.++
T Consensus 470 ~-~--~--~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id 516 (524)
T TIGR02348 470 S-K--G--NFGFNAATGEYEDLVEAGIIDPTKVTRSALQNAASIAGLLLTTE 516 (524)
T ss_pred c-C--C--CeeEeCcCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHH
Confidence 5 2 2 38999999999999999999999999999999999888766554
No 42
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=2.8e-36 Score=338.10 Aligned_cols=281 Identities=19% Similarity=0.294 Sum_probs=231.7
Q ss_pred CCccceEEEEeEEEeccCCCCCC---cc----cccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHH
Q psy14945 160 KSDVCIILVKGVVLNHGARHPDM---PK----SVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIAR 232 (629)
Q Consensus 160 gs~~dS~li~Gvv~~~~~~~~~m---~~----~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~ 232 (629)
++..++++++|+.|++++.+|+| |+ .++||+|++++++|++.+. +
T Consensus 181 ~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~---------------------~------- 232 (529)
T CHL00093 181 STVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQ---------------------D------- 232 (529)
T ss_pred ccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHH---------------------H-------
Confidence 35677899999999999999975 54 4999999999999975211 0
Q ss_pred HHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHH--HHH----hCcEEEecc
Q psy14945 233 ASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDL--FAR----EGIIALRRA 306 (629)
Q Consensus 233 e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~--la~----~~I~vv~~v 306 (629)
+... +..+. ..+. . + ++++++|++.++.+ +.+ ++|.++++.
T Consensus 233 ----i~~~--------l~~i~-------------~~~~--~-l-----vi~~~~i~~~al~~l~l~k~~g~~~i~avr~~ 279 (529)
T CHL00093 233 ----LLPI--------LEQVT-------------KTKR--P-L-----LIIAEDVEKEALATLVLNKLRGIVNVVAVRAP 279 (529)
T ss_pred ----HHHH--------HHHHH-------------hcCC--C-E-----EEEcCCCChHHHHHHHHhhhcccceEEEEecC
Confidence 1111 23333 1111 0 1 34678998855444 476 589999988
Q ss_pred c-----hhhHHHHHHHhCCcccc-----cccccCcCCCcccceEEEEEEcCeeEEEEee---------cCCC--------
Q psy14945 307 K-----RRNMERLSLACGGTAMN-----SVEGLEPAHLGYAGSVFEHVLGEEKFTFVEE---------CKNP-------- 359 (629)
Q Consensus 307 ~-----~~dl~rIak~tGg~i~~-----s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~---------~~~~-------- 359 (629)
+ +.+++|||++|||++++ ++..+++..+|+|+.+++. +++++++++ |...
T Consensus 280 ~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 356 (529)
T CHL00093 280 GFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLGQARRIIVT---KDSTTIIADGNEEQVKARCEQLRKQIEIAD 356 (529)
T ss_pred CCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCCcceEEEEe---cCEEEEEecCcHHHHHHHHHHHHHHhhhcC
Confidence 4 36899999999999999 6888888899999999854 367777762 3221
Q ss_pred -----------------ccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh-hcCc
Q psy14945 360 -----------------QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN-TVKG 421 (629)
Q Consensus 360 -----------------~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~-~i~~ 421 (629)
..+||++||+++..++|.+|+++||+++++++++++ +|||||++|++++.+|++++. ..++
T Consensus 357 ~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DAl~a~r~a~~~g-vVpGGGa~e~~~s~~L~~~~~~~~~g 435 (529)
T CHL00093 357 SSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEG-IVPGGGATLVHLSENLKTWAKNNLKE 435 (529)
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHHcC-cccCCcHHHHHHHHHHHHHhccCCCh
Confidence 367899999999999999999999999999999998 999999999999999999876 7888
Q ss_pred chHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhh
Q psy14945 422 KSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWII 501 (629)
Q Consensus 422 ~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e 501 (629)
.+++++++|++||+.||++|++|+|+|+.+++.+++.. ..++|+|+.+|++.|+.+.|||||+.||.++++.|++
T Consensus 436 ~~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~-----~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e 510 (529)
T CHL00093 436 DELIGALIVARAILAPLKRIAENAGKNGSVIIEKVQEQ-----DFEIGYNAANNKFVNMYEAGIIDPAKVTRSALQNAAS 510 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHcc-----CCCEeEECCCCcccchHhccCEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999653 2478999999999999999999999999999999999
Q ss_pred cCCCCeEEe
Q psy14945 502 SGLHPRVIT 510 (629)
Q Consensus 502 ~a~~~~iV~ 510 (629)
+|...+.++
T Consensus 511 ~a~~iL~id 519 (529)
T CHL00093 511 IASMILTTE 519 (529)
T ss_pred HHHHHHHHH
Confidence 887765554
No 43
>KOG0358|consensus
Probab=100.00 E-value=1.4e-38 Score=323.11 Aligned_cols=370 Identities=19% Similarity=0.216 Sum_probs=258.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH----------------hhc------------cccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV----------------NLK------------MHKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~----------------~~~------------~~~~ 273 (629)
.-||+++|+++-+..||.+.||||||||.++|.||..|+.|++++ ... .++.
T Consensus 77 vlhP~akmLvelS~aQD~eaGDGTTsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~ 156 (534)
T KOG0358|consen 77 VLHPAAKMLVELSAAQDSEAGDGTTSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRES 156 (534)
T ss_pred hhChHHHHHHHhhhhccccccCCceEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHH
Confidence 469999999999999999999999999999999999999999882 000 0111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccch--------hhHHHHHHHhCCcccccc--cc--cCcCCCcccceEE
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR--------RNMERLSLACGGTAMNSV--EG--LEPAHLGYAGSVF 341 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~--------~dl~rIak~tGg~i~~s~--~~--l~~~~lG~~~~v~ 341 (629)
++..+.++|++|.++. ...+|+...+.++..+.. -.++||.+..||++.++- +. ++....+..+.
T Consensus 157 Li~~atTsLnSKvvSq-~s~llapmAVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDte~i~glvl~~~~~~~~gp-- 233 (534)
T KOG0358|consen 157 LIKSATTSLNSKVVSQ-YSSLLAPMAVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDTELIKGLVLTQKASKSAGP-- 233 (534)
T ss_pred HHHHHHhHhhHHHHHh-hccccchHHHHHHHhccCcccccccchhhhhhHHhhCCccchhhhhcceEEeeecccCCCc--
Confidence 2222235677776643 345677777776665521 146799999999998873 11 22222222211
Q ss_pred EEEEcCeeEEEEeecC---C-CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCC-c------ccCCChHHHHH
Q psy14945 342 EHVLGEEKFTFVEECK---N-PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGA-V------VPGAGAFEVAA 408 (629)
Q Consensus 342 e~~i~~~~~~~~~~~~---~-~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~-V------V~GGG~~El~l 408 (629)
.++.+.++-++.=|- . .....|++....++ .++|-..-+-.. ++..-+.++ | +.--...++++
T Consensus 234 -triekAkIglIQF~iS~PKtdmen~iiv~DyaqMdrilkeER~YiL~m---cKkIKk~gcnvLliQKSILRdavsDLAl 309 (534)
T KOG0358|consen 234 -TRIEKAKIGLIQFQISPPKTDMENQIIVNDYAQMDRILKEERQYILNM---CKKIKKAGCNVLLIQKSILRDAVSDLAL 309 (534)
T ss_pred -chhhhceeeEEEEEecCCCCCcccceEecCHHHHHHHHHHHHHHHHHH---HHHHHhcCCeEEEEeHHHHHHHHHHHHH
Confidence 113344444333121 1 13456676665532 233222222222 222221111 1 11123478888
Q ss_pred HHHHHhhhh-hcCcchHHHHHHHHHHHhhhh-----HHHHHhcCCChHHHHHHHHHhhcC-----CC----Cc--eEEEE
Q psy14945 409 WHALQNYKN-TVKGKSRLGIQAYAEALLIIP-----KTIAVNSGFDAQDTLVKLQEACGE-----AP----GV--AVGVD 471 (629)
Q Consensus 409 ~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip-----~~L~~NaG~d~~~vl~~L~~~~~~-----~~----~~--~~Gid 471 (629)
| ||.+.+. -+++.++..++.+|+++..-| ..-+++.|+- ++.++......+ .| .+ .+-++
T Consensus 310 H-fL~klkimvikdieRediefick~l~c~Pia~id~f~~d~Lg~a--dlveE~~~~G~gkivk~tg~~n~g~tvsil~R 386 (534)
T KOG0358|consen 310 H-FLAKLKIMVIKDIEREDIEFICKTLGCKPIADIDHFTADKLGSA--DLVEETDSSGEGKIVKITGIQNAGRTVSILLR 386 (534)
T ss_pred H-HHHhCcEEEEccccHhhHHHHHhhcCCeecchhhhcChhhcCcc--hhhhhcccCCCccEEEEEEeecCCCceEEEEe
Confidence 6 9988874 567778999999999877655 3334444432 112222111000 00 11 23357
Q ss_pred eccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhH
Q psy14945 472 VNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVE 551 (629)
Q Consensus 472 ~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~ 551 (629)
+.+.-++++.+|+++|++||.+...+ .+.+++|||+.| ++++..|.+++....|.+.|+.+
T Consensus 387 Gsn~lvleEaeRSlhDALCVirCLvk-------~r~li~GGGapE-ieia~~L~~~a~t~eG~~~yc~r----------- 447 (534)
T KOG0358|consen 387 GSNKLVLEEAERSLHDALCVIRCLVK-------KRALIAGGGAPE-IEIALRLSALARTLEGVEAYCWR----------- 447 (534)
T ss_pred cCchhhhHHHhhhhhhhhHHHHhhhh-------ccceecCCCCcc-hHHHHHHHHHHhhhccchhHHHH-----------
Confidence 77888999999999999999999887 999999999999 99999999999999999999998
Q ss_pred HHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 552 RELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 552 ~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+||+|||+||.+||||||++|+.++++||+.|++ |+.++|||++.|.+.||.+..|+.|+.|..++|++
T Consensus 448 -------afA~AlEvIP~tLAeNAGLnpI~~VtELRn~haq-ge~~aGInVRkg~~tni~ee~VvQPllVs~Saitl 516 (534)
T KOG0358|consen 448 -------AFADALEVIPYTLAENAGLNPIATVTELRNRHAQ-GEKNAGINVRKGGITNILEENVVQPLLVSISAITL 516 (534)
T ss_pred -------HHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhc-CCcccceeeecccchhhHHHhcccceeeeHHHHHH
Confidence 6889999999999999999999999999999988 78999999999999999999999999999999874
No 44
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=3.9e-37 Score=346.03 Aligned_cols=369 Identities=19% Similarity=0.242 Sum_probs=259.2
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh---c-c-c------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL---K-M-H------ 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~---~-~-~------ 271 (629)
..||.++|+++.++.|++++|||||||+.++++||++|+.|++++ .+ . + .
T Consensus 78 ~~hP~akll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~ 157 (533)
T PTZ00212 78 LDNPAAKILVDISKTQDEEVGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKF 157 (533)
T ss_pred CcCHHHHHHHHHHHhhhhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhh
Confidence 469999999999999999999999999999999999999999871 00 0 0 0
Q ss_pred -cccCccccccccccCCCHHHHHHHHHhCcEEEeccc---hhhHHHHHHHhCCccccccc--c--cCcC-CCcccceEEE
Q psy14945 272 -KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK---RRNMERLSLACGGTAMNSVE--G--LEPA-HLGYAGSVFE 342 (629)
Q Consensus 272 -~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~---~~dl~rIak~tGg~i~~s~~--~--l~~~-~lG~~~~v~e 342 (629)
..+..++.+++++| +.....++|++.++.++..+. ..+..++.+..|+++.+|.- . ++.. ..+..
T Consensus 158 ~~~l~~va~t~l~sk-~~~~~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds~lv~G~v~~~~~~~~~~----- 231 (533)
T PTZ00212 158 KEDLLNIARTTLSSK-LLTVEKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDSYLEDGFILEKKIGVGQP----- 231 (533)
T ss_pred HHHHHHHHHHHhccc-ccchhHHHHHHHHHHHHHHHhccCCccceEEEEecCcCccccEEEEeEEEecccCCCCC-----
Confidence 11122333456666 334455677777776665553 22556888999999998852 1 2211 11222
Q ss_pred EEEcCeeEEEEeecC----CC--ccEEEEecCCCccC-HHHHH-HHHHhhHHHHHHHhhCC--CcccCCChHHHHHHHHH
Q psy14945 343 HVLGEEKFTFVEECK----NP--QSVTILLKGPNKHT-LAQTK-DAVRDGLRAIKNTIDDG--AVVPGAGAFEVAAWHAL 412 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~----~~--~~~TIll~g~~~~~-l~e~~-r~i~dal~vv~~~~~~~--~VV~GGG~~El~l~~~L 412 (629)
..+.+.+++++. |+ .+ ...++.+..+.+.. +++.+ +.+.+....+ ...+ .++..+|..+.+++ +|
T Consensus 232 ~~i~n~kIll~~-~~Le~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~I---i~~gv~vvv~~~~I~d~a~~-~L 306 (533)
T PTZ00212 232 KRLENCKILVAN-TPMDTDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKI---LAHGCNVFINRQLIYNYPEQ-LF 306 (533)
T ss_pred ccccCCcEEEEe-CCCCCCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH---HhcCCeEEEeCCCccHHHHH-HH
Confidence 235578888776 43 11 25677777776531 22222 3333333323 2222 36778888888885 88
Q ss_pred Hhhhh-hcCcchHHHHHHHHHHHhhhhHHH-----HHhcCCChHHHHHHHHHh---hc-CC-CC--ceEEEEeccCCCCC
Q psy14945 413 QNYKN-TVKGKSRLGIQAYAEALLIIPKTI-----AVNSGFDAQDTLVKLQEA---CG-EA-PG--VAVGVDVNSGEVLN 479 (629)
Q Consensus 413 ~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L-----~~NaG~d~~~vl~~L~~~---~~-~~-~~--~~~Gid~~t~~i~d 479 (629)
.+++. .+....+++++++|++....+-.- ....|.........+... .. +. .. .++-+++.|...++
T Consensus 307 ~~~~I~avr~v~~~~l~rIa~~tGa~iis~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI~lrG~t~~~l~ 386 (533)
T PTZ00212 307 AEAGIMAIEHADFDGMERLAAALGAEIVSTFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAKGEACTIVLRGASTHILD 386 (533)
T ss_pred HHCCCEEEecCCHHHHHHHHHHhCCEEeecCCCCCHHHccCCceEEEEEECCeEEEEEEccCCCCEEEEEEECCChhHHH
Confidence 87764 444456788999888865533110 111222100000000000 00 00 01 23445777889999
Q ss_pred CCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhc
Q psy14945 480 PTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLA 559 (629)
Q Consensus 480 ~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~ 559 (629)
+.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+.+++++++++ +
T Consensus 387 E~er~i~DAl~vv~~~i~-------~~~vVpGGGa~e-~~ls~~L~~~~~~~~~~~~~~i~------------------~ 440 (533)
T PTZ00212 387 EAERSLHDALCVLSQTVK-------DTRVVLGGGCSE-MLMANAVEELAKKVEGKKSLAIE------------------A 440 (533)
T ss_pred HHHHHHHHHHHHHHHHhh-------CCCEeeCCCHHH-HHHHHHHHHHHhhCCCHHHHHHH------------------H
Confidence 999999999999999997 999999999999 99999999999888999999998 5
Q ss_pred cCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 560 EPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 560 ~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
|++||++||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|.++||.+.|||||+.||+|+|++
T Consensus 441 ~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~-~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~ 508 (533)
T PTZ00212 441 FAKALRQIPTIIADNGGYDSAELVSKLRAEHYK-GNKTAGIDMEKGTVGDMKELGITESYKVKLSQLCS 508 (533)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCCccceeccCCcccchhhccceecHHHHHHHHHH
Confidence 777888899999999999999999999999987 56789999999999999999999999999999974
No 45
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.1e-36 Score=341.48 Aligned_cols=358 Identities=19% Similarity=0.257 Sum_probs=257.6
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh---c-c-c------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL---K-M-H------ 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~---~-~-~------ 271 (629)
..||.++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ . + +
T Consensus 66 ~~hP~akll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 145 (517)
T cd03336 66 VDNPAAKVLVDISKVQDDEVGDGTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAF 145 (517)
T ss_pred CcChHHHHHHHHHHHHHhHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchh
Confidence 479999999999999999999999999999999999999999871 00 0 0 0
Q ss_pred -cccCccccccccccCCCHHHHHHHHHhCcEEEeccc---hhhHHHHHHHhCCccccccc--c--cCcCC-CcccceEEE
Q psy14945 272 -KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK---RRNMERLSLACGGTAMNSVE--G--LEPAH-LGYAGSVFE 342 (629)
Q Consensus 272 -~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~---~~dl~rIak~tGg~i~~s~~--~--l~~~~-lG~~~~v~e 342 (629)
..+..++.+++++|.++ ...++|++..+.++..+. ..+..++.+..|+++.+|.. . ++... .+..
T Consensus 146 ~~~l~~ia~t~lssk~~~-~~~~~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds~l~~G~v~~~~~~~~~~----- 219 (517)
T cd03336 146 REDLLNIARTTLSSKILT-QDKEHFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDSYLDEGFLLDKKIGVNQP----- 219 (517)
T ss_pred HHHHHHHHHhhccccccc-hhHHHHHHHHHHHHHHhhccCCccceeEEEccCCCccceEEEeeEEEecccCCCCC-----
Confidence 01122333456666432 233445555555554442 22567889999999998852 1 22221 2222
Q ss_pred EEEcCeeEEEEeecC----CC--ccEEEEecCCCcc-CHHHHH-HHHHhhHHHHHHHhhCC--CcccCCChHHHHHHHHH
Q psy14945 343 HVLGEEKFTFVEECK----NP--QSVTILLKGPNKH-TLAQTK-DAVRDGLRAIKNTIDDG--AVVPGAGAFEVAAWHAL 412 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~----~~--~~~TIll~g~~~~-~l~e~~-r~i~dal~vv~~~~~~~--~VV~GGG~~El~l~~~L 412 (629)
..+.+.+++++. |+ .+ ...++.+..+.+. .+.+.+ +.+.+....+ ...+ .++..++..+.+.+ ||
T Consensus 220 ~~~~n~kIli~~-~~le~~~~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I---~~~gv~~v~~~~~I~~~~~~-~l 294 (517)
T cd03336 220 KRIENAKILIAN-TPMDTDKIKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKI---LKHGINCFINRQLIYNYPEQ-LF 294 (517)
T ss_pred CeeccccEEEEe-cCCCcccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH---HhcCCeEEEeCCCccHHHHH-HH
Confidence 235578888876 43 22 2578888887654 222222 3333333333 3332 46777788888885 88
Q ss_pred Hhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-----------------C---C--ceE
Q psy14945 413 QNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-----------------P---G--VAV 468 (629)
Q Consensus 413 ~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-----------------~---~--~~~ 468 (629)
.+++. .+....+.+++++|++....+ +..++.+...+.| + + . .++
T Consensus 295 ~~~~I~av~~v~~~~L~rIa~~tGa~i-----------i~~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~TI 363 (517)
T cd03336 295 ADAGIMAIEHADFDGVERLALVTGGEI-----------ASTFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAAGEACTI 363 (517)
T ss_pred HHCCcEEEecCCHHHHHHHHHHhCCEE-----------ecccCCCCcccccccceEEEEEECCeEEEEEEccCCCceEEE
Confidence 87774 455556778999988865433 2222222111111 0 1 1 134
Q ss_pred EEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhh
Q psy14945 469 GVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRT 548 (629)
Q Consensus 469 Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~ 548 (629)
-+++.|..++++.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 364 ~lrG~t~~~l~E~er~i~Dal~~~~~~i~-------~~~vvpGGGa~e-~~ls~~l~~~~~~~~~~~~~~i~-------- 427 (517)
T cd03336 364 VLRGASQQILDEAERSLHDALCVLAQTVK-------DTRVVLGGGCSE-MLMAKAVEELAKKTPGKKSLAIE-------- 427 (517)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHh-------CCCEEeCCCHHH-HHHHHHHHHHhhhCCCHHHHHHH--------
Confidence 45777899999999999999999999997 999999999999 99999999999888999999998
Q ss_pred hhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 549 KVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 549 ~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++||++||++||+|||+|+.+++++|++.|++ ++.++|+|+.+|+++||.+.|||||+.||+|+|++
T Consensus 428 ----------~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~ 496 (517)
T cd03336 428 ----------AFAKALRQLPTIIADNAGYDSAELVAQLRAAHYN-GNTTAGLDMRKGTVGDMKELGITESFKVKRQVLLS 496 (517)
T ss_pred ----------HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCCceeeecCCCCccchhhcCceecHHHHHHHHHH
Confidence 5778888899999999999999999999999977 56789999999999999999999999999999974
No 46
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.2e-36 Score=339.87 Aligned_cols=361 Identities=17% Similarity=0.180 Sum_probs=263.5
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh----cc-c------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL----KM-H------ 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~----~~-~------ 271 (629)
..||+++|+++.++.|++++|||||+|+.++++||++|..|++++ .+ .+ .
T Consensus 74 ~~hP~akll~~~a~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 153 (526)
T cd03339 74 VDHQIAKLLVELSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNK 153 (526)
T ss_pred ccCHHHHHHHHHHHhhhhhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccH
Confidence 469999999999999999999999999999999999999999861 00 00 0
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccc-----h--hhHHHHHHHhCCccccccc--c--cCcCC--Ccccc
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK-----R--RNMERLSLACGGTAMNSVE--G--LEPAH--LGYAG 338 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~-----~--~dl~rIak~tGg~i~~s~~--~--l~~~~--lG~~~ 338 (629)
+.+.-++.+++++| +.....+.|++.++.++..+. . .++++|.++.|+++.+|.. . ++... -+..+
T Consensus 154 ~~l~~ia~tsl~sk-~~~~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS~~v~Givi~~~~~~~~m~~ 232 (526)
T cd03339 154 EPLIQTAMTSLGSK-IVSRCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDTKLVKGIVIDKDFSHPQMPK 232 (526)
T ss_pred HHHHHHHHHhhccc-chhhHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHcceeeeEEEecccCCCCCCc
Confidence 01122333556665 445556777777777665442 1 2677889999999999842 1 22211 12232
Q ss_pred eEEEEEEcCeeEEEEeecC--C---CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 339 SVFEHVLGEEKFTFVEECK--N---PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~--~---~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
.+.+.++.++. |+ . ....++.+..+.++ ..+.-+..+...+..+.... -+.|+...+..+++++ |
T Consensus 233 -----~~~n~kI~ll~-~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g-~~lvi~~~~I~~~al~-~ 304 (526)
T cd03339 233 -----EVKDAKIAILT-CPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAG-ANLVICQWGFDDEANH-L 304 (526)
T ss_pred -----eecCCCEEEEE-ecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEeCCCCCHHHHH-H
Confidence 23477777775 22 1 14567777776543 33333455555555554332 2457888999999996 7
Q ss_pred HHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC----------------------CCC---
Q psy14945 412 LQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE----------------------APG--- 465 (629)
Q Consensus 412 L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~----------------------~~~--- 465 (629)
|.+++. .+....+..++++|++....+ +..+..+...+.| .++
T Consensus 305 L~~~~I~av~~v~~~~LerIa~~tGa~i-----------i~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~~~ 373 (526)
T cd03339 305 LLQNGLPAVRWVGGVEIELIAIATGGRI-----------VPRFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNSKA 373 (526)
T ss_pred HHHCCCEEEEeCCHHHHHHHHHHhCCEE-----------ecchhhCChhhcccCceEEEEEecCCCcEEEEEECCCCCCE
Confidence 776664 444456777888888855433 2222222221111 011
Q ss_pred ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q psy14945 466 VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTS 545 (629)
Q Consensus 466 ~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~a 545 (629)
.++-+++.|...+++.++.+.|++++.+++++ ++++|||||++| ++++..|++++...++++|++++
T Consensus 374 ~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~-------~~~vvpGGGa~e-~~ls~~l~~~~~~~~~~~~~~~~----- 440 (526)
T cd03339 374 VTIFIRGGNKMIIEEAKRSLHDALCVVRNLIR-------DNRIVYGGGAAE-ISCSLAVEKAADKCSGIEQYAMR----- 440 (526)
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHHHHhh-------CCCEEeCCCHHH-HHHHHHHHHHhccCCCHHHHHHH-----
Confidence 13345777889999999999999999999997 999999999999 99999999998888999999998
Q ss_pred hhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHH
Q psy14945 546 LRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 625 (629)
Q Consensus 546 l~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~ 625 (629)
+|++||++||++||+|||+|+.+++++|+..|.+++..++|+|+.+|.+.||.+.|||||+.||+++
T Consensus 441 -------------~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~ 507 (526)
T cd03339 441 -------------AFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQKVFETLISKKQQ 507 (526)
T ss_pred -------------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcCceecHHHHHHH
Confidence 5778888899999999999999999999999975335689999999999999999999999999999
Q ss_pred hhc
Q psy14945 626 INS 628 (629)
Q Consensus 626 i~~ 628 (629)
|+.
T Consensus 508 l~~ 510 (526)
T cd03339 508 ILL 510 (526)
T ss_pred HHH
Confidence 974
No 47
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.4e-36 Score=339.28 Aligned_cols=372 Identities=17% Similarity=0.193 Sum_probs=265.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc------c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM------H 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~------~ 271 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ .. +
T Consensus 78 ~~hP~akll~~~a~~qd~~~GDGTttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 157 (532)
T TIGR02343 78 VDNPIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNK 157 (532)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCH
Confidence 479999999999999999999999999999999999999999871 00 00 0
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccc-------hhhHHHHHHHhCCccccccc--c--cCcC--CCcccc
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK-------RRNMERLSLACGGTAMNSVE--G--LEPA--HLGYAG 338 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~-------~~dl~rIak~tGg~i~~s~~--~--l~~~--~lG~~~ 338 (629)
..+.-++.+++++| +.....+.|.+.++.++..+. ..+++++.+..|+++.+|.. . ++.. ..+..+
T Consensus 158 ~~l~~ia~t~l~sK-~~~~~~~~ls~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds~~v~Gi~i~~~~~~~~m~~ 236 (532)
T TIGR02343 158 EPLIQAAKTSLGSK-IVSKCHRRFAEIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDTKLIKGIIIDKDFSHPQMPK 236 (532)
T ss_pred HHHHHHHHHhhccc-hhhHHHHHHHHHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccceeEeeEEEecCcCCCCCCe
Confidence 11222333556665 445556677777666665442 12678899999999998831 1 2222 113333
Q ss_pred eEEEEEEcCeeEEEEeecC----CC-ccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 339 SVFEHVLGEEKFTFVEECK----NP-QSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~----~~-~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
. +.+.+++++. |+ .+ ...++.+..+.++ +.+.-+..+...+..+.... -+.|+..+|..+.+++ |
T Consensus 237 ~-----~~n~kI~l~~-~~le~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g-~~lvi~~~~I~~~al~-~ 308 (532)
T TIGR02343 237 E-----VKDAKIAILT-CPFEPPKPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSG-ANIVICQWGFDDEANH-L 308 (532)
T ss_pred e-----ecCCcEEEEE-eeccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEeCCCccHHHHH-H
Confidence 2 3467777775 22 11 4567778887644 33333455555555554432 2557888899999986 8
Q ss_pred HHhhhh-hcCcchHHHHHHHHHHHhhhhHH-----HHHhcCCChHHHHHHH-----HHhhc-CCCC---ceEEEEeccCC
Q psy14945 412 LQNYKN-TVKGKSRLGIQAYAEALLIIPKT-----IAVNSGFDAQDTLVKL-----QEACG-EAPG---VAVGVDVNSGE 476 (629)
Q Consensus 412 L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-----L~~NaG~d~~~vl~~L-----~~~~~-~~~~---~~~Gid~~t~~ 476 (629)
|.+++. .+....++.++++|++....+-. -.+..|.........+ +..+. +.++ .++-+++.|..
T Consensus 309 L~~~~i~~v~~~~~~~l~~Ia~~tGa~~i~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~~~~TIllrG~t~~ 388 (532)
T TIGR02343 309 LLQNDLPAVRWVGGHELELIAIATGGRIVPRFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNSKAVTIFIRGGNKM 388 (532)
T ss_pred HHHCCcEEEEcCCHHHHHHHHHHhCCEEecccccCCHhHCcccceEEEEEecCCcceEEEEECCCCCCEEEEEEECCCHH
Confidence 877764 45555778899998886544311 0111232110000000 00000 0011 13446778899
Q ss_pred CCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHh
Q psy14945 477 VLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELAD 556 (629)
Q Consensus 477 i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 556 (629)
.+++.+|.+.|++++.+++++ ++++|||||++| +++++.|++++.+.++.+|++++
T Consensus 389 ~l~E~er~l~DAl~~v~~~i~-------~~~vvpGGGa~e-~~ls~~l~~~~~~~~~~~~~~i~---------------- 444 (532)
T TIGR02343 389 IIEEAKRSIHDALCVVRNLIK-------NSRIVYGGGAAE-ISCSLAVSQEADKYSGVEQYAIR---------------- 444 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------CCCEEeCcCHHH-HHHHHHHHHHhccCCcHHHHHHH----------------
Confidence 999999999999999999997 999999999999 99999999998888999999998
Q ss_pred hhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 557 LLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 557 ~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++|++.|++.+..++|+|+.+|.+.||.+.|||||+.||+++|+.
T Consensus 445 --~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~Dp~~vk~~al~~ 514 (532)
T TIGR02343 445 --AFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKEQGVFETLIGKKQQIQL 514 (532)
T ss_pred --HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchhccCeecHHHHHHHHHH
Confidence 5788888999999999999999999999999975235689999999999999999999999999999974
No 48
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.5e-36 Score=340.07 Aligned_cols=370 Identities=18% Similarity=0.229 Sum_probs=259.6
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----ccc------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KMH------ 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~~------ 271 (629)
..||.++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ ...
T Consensus 67 i~hP~akll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 146 (519)
T TIGR02341 67 VDNPAAKVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKF 146 (519)
T ss_pred CcChHHHHHHHHHHHhHhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCccccc
Confidence 479999999999999999999999999999999999999999871 00 000
Q ss_pred -cccCccccccccccCCCHHHHHHHHHhCcEEEeccch---hhHHHHHHHhCCccccccc--c--cCcCC-CcccceEEE
Q psy14945 272 -KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR---RNMERLSLACGGTAMNSVE--G--LEPAH-LGYAGSVFE 342 (629)
Q Consensus 272 -~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~---~dl~rIak~tGg~i~~s~~--~--l~~~~-lG~~~~v~e 342 (629)
..+..++.+++++| +.....++|.+.++.++..+.. .+..++.+..|+++.++.- . ++... .+..
T Consensus 147 ~~~L~~ia~t~l~sk-i~~~~~~~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s~l~~G~v~~~~~~~~~~----- 220 (519)
T TIGR02341 147 RDDLLNIARTTLSSK-ILSQHKDHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDSYLDEGFLLEKKIGVNQP----- 220 (519)
T ss_pred HHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHHHhccCCChhheEEEEccCCCcccceEEeeEEEeccCCCCCc-----
Confidence 01112223455554 4455567777777777666532 2456778888999998852 1 22211 1222
Q ss_pred EEEcCeeEEEEeecC----CCc--cEEEEecCCCcc-CHHHHH-HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHh
Q psy14945 343 HVLGEEKFTFVEECK----NPQ--SVTILLKGPNKH-TLAQTK-DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQN 414 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~----~~~--~~TIll~g~~~~-~l~e~~-r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~ 414 (629)
..+.+.++++++ |+ .+. ..++.+..+++. .+.+.+ +.+.+.+..+.+..- ..++..++..+.+++ ||.+
T Consensus 221 ~~~~n~~Ili~~-~~Le~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~-~~v~~~~~I~~~~~~-~l~~ 297 (519)
T TIGR02341 221 KRIENAKILIAN-TPMDTDKVKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNI-NCFINRQLIYNYPEQ-LFAD 297 (519)
T ss_pred eeeccccEEEEe-cCCCCCccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCC-cEEEECCcCCHHHHH-HHHH
Confidence 235578888776 33 111 567888666543 233333 333333333322211 236777788888885 8877
Q ss_pred hhh-hcCcchHHHHHHHHHHHhhhhHHH-----HHhcCCCh-HHHHHHH---HHhhc-CC-CC--ceEEEEeccCCCCCC
Q psy14945 415 YKN-TVKGKSRLGIQAYAEALLIIPKTI-----AVNSGFDA-QDTLVKL---QEACG-EA-PG--VAVGVDVNSGEVLNP 480 (629)
Q Consensus 415 ~~~-~i~~~~k~~i~~fa~ALe~ip~~L-----~~NaG~d~-~~vl~~L---~~~~~-~~-~~--~~~Gid~~t~~i~d~ 480 (629)
++. .+....+..++++|++....+-.- .+..|+.. ++. ..+ +-.+. +. .. .++-+++.|..++++
T Consensus 298 ~~I~~v~~~~~~~l~~ia~~tGa~ii~~~~~~~~~~lG~~~~v~~-~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E 376 (519)
T TIGR02341 298 AGVMAIEHADFEGIERLALVTGGEIVSTFDHPELVKLGSCDLIEE-IMIGEDKLLKFSGVKLGEACTIVLRGATQQILDE 376 (519)
T ss_pred CCcEEEecCCHHHHHHHHHHhCCEEecccccCCccccccCceEEE-EEECCEEEEEEEcCCCCCEEEEEEeCCCHHHHHH
Confidence 764 444456778999988865433110 01123211 100 000 00000 00 01 234457788999999
Q ss_pred CcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhcc
Q psy14945 481 TSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAE 560 (629)
Q Consensus 481 ~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~ 560 (629)
.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++ +|
T Consensus 377 ~er~i~Dal~~~~~~~~-------~~~vvpGGGa~e-~~ls~~l~~~~~~~~~~~~~~i~------------------~~ 430 (519)
T TIGR02341 377 SERSLHDALCVLSQTVK-------ESRTVLGGGCSE-MLMSKAVAVEAQKVPGKEALAVE------------------AF 430 (519)
T ss_pred HHHHHHHHHHHHHHHHh-------CCCEEeCCCHHH-HHHHHHHHHHhhcCCChHHHHHH------------------HH
Confidence 99999999999999997 999999999999 99999999998888999999998 57
Q ss_pred CCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 561 PNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 561 a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
++||++||++||+|||+|+.+++++|++.|+. +..++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 431 a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~ 497 (519)
T TIGR02341 431 ARALRQLPTIIADNAGFDSAELVAQLRAAHYN-GNHTMGLDMEEGEIADMRKLGIIESYKVKRAVVSS 497 (519)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-CCCccceecCCCcccchhhccceEcHHHHHHHHHH
Confidence 78888899999999999999999999999977 56789999999999999999999999999999974
No 49
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=3.9e-35 Score=329.20 Aligned_cols=305 Identities=21% Similarity=0.276 Sum_probs=249.0
Q ss_pred hhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCc-cceEEEEeEEEeccCCCCCC-------cccccCee
Q psy14945 119 SDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSD-VCIILVKGVVLNHGARHPDM-------PKSVKNAH 190 (629)
Q Consensus 119 ~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~-~dS~li~Gvv~~~~~~~~~m-------~~~i~n~k 190 (629)
++++.++++++.. .|.. +.+.+.. +++. .++++++|++|++++.+|+| +.+++||+
T Consensus 156 ~~i~~lv~~Av~~-vg~~-------------g~i~v~~--~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~ 219 (546)
T PRK14104 156 AEIGKFLADAMKK-VGNE-------------GVITVEE--AKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAY 219 (546)
T ss_pred hHHHHHHHHHHHH-hccC-------------CceeeEe--cccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcE
Confidence 5577777777762 2321 1233322 4555 58999999999999999976 67799999
Q ss_pred EEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc
Q psy14945 191 ILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM 270 (629)
Q Consensus 191 Ill~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~ 270 (629)
|++++..+.. . .. +... +..+. ..+.
T Consensus 220 Ilv~d~~i~~----------------------~---~~--------i~~~--------l~~i~-------------~~g~ 245 (546)
T PRK14104 220 ILINEKKLSS----------------------L---NE--------LLPL--------LEAVV-------------QTGK 245 (546)
T ss_pred EEEehhhhcC----------------------H---HH--------HHHH--------HHHHH-------------HhCc
Confidence 9999855421 1 11 1122 33333 1221
Q ss_pred ccccCccccccccccCCCHHHHHHHHH------hCcEEEeccc-----hhhHHHHHHHhCCccccc-----ccccCcCCC
Q psy14945 271 HKFAPDCSTSDRYRTGIDPQSLDLFAR------EGIIALRRAK-----RRNMERLSLACGGTAMNS-----VEGLEPAHL 334 (629)
Q Consensus 271 ~~~l~v~~~~~l~~k~i~~~~~~~la~------~~I~vv~~v~-----~~dl~rIak~tGg~i~~s-----~~~l~~~~l 334 (629)
.+ ++++++|++.++++|.. .+|.++++.+ +.+++|||++|||+++++ +++++...+
T Consensus 246 ----~l----vI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~L 317 (546)
T PRK14104 246 ----PL----VIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQML 317 (546)
T ss_pred ----CE----EEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHC
Confidence 11 35799999999999985 6789997765 679999999999999999 778888889
Q ss_pred cccceEEEEEEcCeeEEEEeecCCC-----------------------------------ccEEEEecCCCccCHHHHHH
Q psy14945 335 GYAGSVFEHVLGEEKFTFVEECKNP-----------------------------------QSVTILLKGPNKHTLAQTKD 379 (629)
Q Consensus 335 G~~~~v~e~~i~~~~~~~~~~~~~~-----------------------------------~~~TIll~g~~~~~l~e~~r 379 (629)
|+|..++ +++++++++.+|.++ ..+||+|||+++..++|.++
T Consensus 318 G~a~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r 394 (546)
T PRK14104 318 GRAKKVM---IDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKD 394 (546)
T ss_pred CceeEEE---EcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHH
Confidence 9999887 577899999888764 78999999999999999999
Q ss_pred HHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHh
Q psy14945 380 AVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEA 459 (629)
Q Consensus 380 ~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~ 459 (629)
+++||+++++++++++ +|||||++|++++.+|+++. ...+.+++++++|++||+.||++|++|+|+|+.+++.+|+..
T Consensus 395 ~i~Dal~a~~~ai~~g-~VpGGGa~e~~~s~~L~~~~-~~~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~ 472 (546)
T PRK14104 395 RVDDAMHATRAAVEEG-IVPGGGVALLRASEQLKGIK-TKNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEK 472 (546)
T ss_pred HHHHHHHHHHHHHHcC-cCcCchHHHHHHHHHHHHhh-cCChHHHHHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhc
Confidence 9999999999999998 99999999999999999874 346789999999999999999999999999999999999764
Q ss_pred hcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 460 CGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 460 ~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
+ ..++|+|+.++++.|+.+.||+||+.||+++|+.|+++|...+.++
T Consensus 473 ~----~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~iL~id 519 (546)
T PRK14104 473 E----QYSYGFDSQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTE 519 (546)
T ss_pred C----CCcEeEeCCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2468999999999999999999999999999999999888776654
No 50
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.2e-36 Score=338.58 Aligned_cols=371 Identities=17% Similarity=0.234 Sum_probs=258.3
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc-----c----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK-----M----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~-----~----~~~ 273 (629)
..||+++|+++.++.|++++|||||+|+.++++||++|..|++.+ .++ . +..
T Consensus 67 ~~hP~akll~~~a~~q~~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 146 (525)
T TIGR02344 67 VAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAA 146 (525)
T ss_pred CCCHHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHH
Confidence 469999999999999999999999999999999999999999871 000 0 000
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccc--------hhhH---HHHHHHhCCccccccc--c--cCcCCC--cc
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK--------RRNM---ERLSLACGGTAMNSVE--G--LEPAHL--GY 336 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~--------~~dl---~rIak~tGg~i~~s~~--~--l~~~~l--G~ 336 (629)
+.-++.+.+++|.++. ..+.|++..+.++..+. ..|+ +++.+..|+++.+|.. . ++.... +.
T Consensus 147 l~~i~~t~l~sk~~~~-~~~~ls~l~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS~lv~Gvvi~k~~~~~~m 225 (525)
T TIGR02344 147 MLKLIQSCIGTKFVSR-WSDLMCDLALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDSCVLKGVMINKDVTHPKM 225 (525)
T ss_pred HHHHHHHhhccccchh-HHHHHHHHHHHHHHHhhccccCCCCccChhhceEEEEecCCChHhcCcccceEEecccCCCCC
Confidence 1112234556665532 23444444444443332 1132 4577888999988742 1 222111 11
Q ss_pred cceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHH
Q psy14945 337 AGSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAW 409 (629)
Q Consensus 337 ~~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~ 409 (629)
. ..+.+.++++++ |+ .....++.+..+.+. .++.-++.+.+.+..+.. ..-..|++.++..+++++
T Consensus 226 ~-----~~~~n~kIlll~-~~Le~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~-~~~~vIi~~k~I~dla~~ 298 (525)
T TIGR02344 226 R-----RYIENPRIVLLD-CPLEYKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIA-VKPDLVITEKGVSDLAQH 298 (525)
T ss_pred c-----cccCCCCEEEEe-cccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEeCCCccHHHHH
Confidence 2 224578888876 33 124577888777643 445444566666555543 222356777888887775
Q ss_pred HHHHhhhh-hcCcchHHHHHHHHHHHhhhhHH-----HHHhcCC-ChHHHHHHHHH---hhc-CCCC---ceEEEEeccC
Q psy14945 410 HALQNYKN-TVKGKSRLGIQAYAEALLIIPKT-----IAVNSGF-DAQDTLVKLQE---ACG-EAPG---VAVGVDVNSG 475 (629)
Q Consensus 410 ~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-----L~~NaG~-d~~~vl~~L~~---~~~-~~~~---~~~Gid~~t~ 475 (629)
||.+++. .+....+..++++|++....+-. -.+..|. .......++.. .+. +.++ .++-+++.|.
T Consensus 299 -~l~~~~I~av~~v~~~~LerIa~~tGa~ii~~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~~~~TIlLrG~t~ 377 (525)
T TIGR02344 299 -YLLKANISAIRRVRKTDNNRIARACGATIVNRPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDPKACTILLRGASK 377 (525)
T ss_pred -HHhHCCceEEecCCHHHHHHHHHHhCCeEecchhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCCCEEEEEEEcCCH
Confidence 8877764 45556788999999886544311 0111232 11000000000 000 0011 1344677788
Q ss_pred CCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHH
Q psy14945 476 EVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELA 555 (629)
Q Consensus 476 ~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 555 (629)
..+++.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 378 ~~l~E~er~l~DAl~~vk~~~~-------~~~vvpGGGa~e-~~ls~~l~~~~~~~~~~~~~~~~--------------- 434 (525)
T TIGR02344 378 DVLNEIERNLQDAMAVARNVLL-------EPKLLPGGGATE-MAVSVYLAKKASKLEGVQQWPYR--------------- 434 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-------CCCcccCCCHHH-HHHHHHHHHHHhcCCCHHHHHHH---------------
Confidence 9999999999999999999997 999999999999 99999999998889999999998
Q ss_pred hhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCC-CceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 556 DLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAP-GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 556 ~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~-~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++||+.||++||+|||+|+.+++++|+..|++ + +.++|+|+.+|++.||.+.|||||+.||+++|++
T Consensus 435 ---~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~ 504 (525)
T TIGR02344 435 ---AVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQ-EGNCTWGIDGETGKIVDMKEKGIWEPLAVKLQTYKT 504 (525)
T ss_pred ---HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-cCCCeEeEECCCCccccchhccceecHHHHHHHHHH
Confidence 5778888899999999999999999999999976 4 5689999999999999999999999999999974
No 51
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.1e-36 Score=335.52 Aligned_cols=364 Identities=26% Similarity=0.318 Sum_probs=257.0
Q ss_pred eccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----c---c--c
Q psy14945 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----K---M--H 271 (629)
Q Consensus 221 ~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~---~--~ 271 (629)
+.+||+++|+++.++.|++++|||||||+.++++||++|..||+++ .+ . . +
T Consensus 66 ~i~hP~a~ll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~ 145 (531)
T TIGR02347 66 QIQHPTASMIARAATAQDDITGDGTTSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDR 145 (531)
T ss_pred cccChHHHHHHHHHHHhhhhhcCcHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCH
Confidence 3579999999999999999999999999999999999999999871 00 0 0 0
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccch----hh--HHHHHHHhCCccccccc--c--cCcCCCcccceEE
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR----RN--MERLSLACGGTAMNSVE--G--LEPAHLGYAGSVF 341 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~----~d--l~rIak~tGg~i~~s~~--~--l~~~~lG~~~~v~ 341 (629)
..+..++.+++++|.++ ...++|.+..+.++..+.. .+ +.++.+..|+++.++.. . ++... -... .
T Consensus 146 ~~l~~ia~tsl~sK~~~-~~~~~ls~iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds~~v~Giv~~~~~-~~~~--~ 221 (531)
T TIGR02347 146 ELLLNVARTSLRTKLPI-DLADQLTEIVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDTTLIRGLVLDHGA-RHPD--M 221 (531)
T ss_pred HHHHHHHHHHhccccch-hhHHHHHHHHHHHHHHHhhcCCCCChhHeEEEEecCCCccccEEEeeEEEecCc-CCCC--C
Confidence 00112223455565442 2234444444444444421 23 34555788888887742 1 22111 1111 1
Q ss_pred EEEEcCeeEEEEeecC----C-CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHh--------hCC-CcccCCChHH
Q psy14945 342 EHVLGEEKFTFVEECK----N-PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTI--------DDG-AVVPGAGAFE 405 (629)
Q Consensus 342 e~~i~~~~~~~~~~~~----~-~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~--------~~~-~VV~GGG~~E 405 (629)
...+.+.+++++. |+ . ....++.+..+++. ..+.-++.+.+.+..+..+. ..+ .|+...|..+
T Consensus 222 ~~~~~n~~Ill~~-~~le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~ 300 (531)
T TIGR02347 222 PRRVKNAYILTCN-VSLEYEKTEVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDP 300 (531)
T ss_pred ceeccCceEEEEe-CCCCCCccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccH
Confidence 2235577888776 33 1 35677888777754 33333344555554444332 112 4667788888
Q ss_pred HHHHHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC--------------------CC
Q psy14945 406 VAAWHALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE--------------------AP 464 (629)
Q Consensus 406 l~l~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~--------------------~~ 464 (629)
.+++ ||.+++. .+....+..++++|++....+ +..+..+...+.| .+
T Consensus 301 ~a~~-~L~~~~I~~i~rv~~~~le~ia~~tGa~~-----------i~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~ 368 (531)
T TIGR02347 301 PSLD-LLAKEGIMALRRAKRRNMERLTLACGGEA-----------LNSVEDLTPECLGWAGLVYETSIGEEKYTFIEEVK 368 (531)
T ss_pred HHHH-HHHHCCceEEccCCHHHHHHHHHHhCCEE-----------ecccccCCccccccceEEEEEEECCeEEEEEEcCC
Confidence 8886 8888764 444456888999998865443 2222222221111 01
Q ss_pred C---ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHH
Q psy14945 465 G---VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDV 541 (629)
Q Consensus 465 ~---~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~ 541 (629)
+ .++-+++.|..++++.++.+.|++++.+++++ ++++|||||++| ++++..|++++...++++|++++
T Consensus 369 ~~~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~-------~~~vvpGGGa~E-~~ls~~l~~~~~~~~~~~~~~i~- 439 (531)
T TIGR02347 369 NPKSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIE-------DKCVVPGAGAFE-IAAYCHLKEEKKSVKGKAKLGVE- 439 (531)
T ss_pred CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhh-------CCcEEeCCCHHH-HHHHHHHHHHhhcCCCHHHHHHH-
Confidence 1 13345777899999999999999999999997 999999999999 99999999998888999999998
Q ss_pred HHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHH
Q psy14945 542 ARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTV 621 (629)
Q Consensus 542 ~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~v 621 (629)
+|++||++||++||+|||+|+.+++++|++.|.+ ++.++|+|+.+|.++||.+.|||||+.|
T Consensus 440 -----------------~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~-~~~~~Gid~~~g~~~d~~~~gV~Dp~~v 501 (531)
T TIGR02347 440 -----------------AFANALLVIPKTLAENSGLDAQDTLVKLEDEHDE-GGEVVGVDLETGEPIDPEIKGIWDNYRV 501 (531)
T ss_pred -----------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-cCCceeeeccCCCccchhhccCEEcHHH
Confidence 5778888899999999999999999999999976 5678999999999999999999999999
Q ss_pred HHHHhhc
Q psy14945 622 KRQIINS 628 (629)
Q Consensus 622 K~~~i~~ 628 (629)
|+|+|++
T Consensus 502 k~~al~~ 508 (531)
T TIGR02347 502 KKQLIQS 508 (531)
T ss_pred HHHHHHH
Confidence 9999974
No 52
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=7.1e-36 Score=337.20 Aligned_cols=287 Identities=20% Similarity=0.249 Sum_probs=237.8
Q ss_pred ecCCCccce-EEEEeEEEeccCCCC-------CCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHH
Q psy14945 157 EYEKSDVCI-ILVKGVVLNHGARHP-------DMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTAS 228 (629)
Q Consensus 157 i~Ggs~~dS-~li~Gvv~~~~~~~~-------~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~ak 228 (629)
.+|++..|+ ++++|++|++++.+| .|+++++||+|+++++.|+. .+++..
T Consensus 232 ~~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~----------------------~~~l~~ 289 (600)
T PLN03167 232 EEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITN----------------------ARDLIG 289 (600)
T ss_pred ccCCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCC----------------------HHHHHH
Confidence 369999997 999999999999999 68999999999999986631 122222
Q ss_pred HHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHH------HhCcEE
Q psy14945 229 LIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFA------REGIIA 302 (629)
Q Consensus 229 ll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la------~~~I~v 302 (629)
++ ..+. ..+. .+ ++.+++|++.++++|. ..+|.+
T Consensus 290 ~l-------------------e~i~-------------~~g~----~l----vI~a~~I~~~aL~~L~~nkl~g~~~i~a 329 (600)
T PLN03167 290 IL-------------------EDAI-------------RGGY----PL----LIIAEDIEQEALATLVVNKLRGSLKIAA 329 (600)
T ss_pred HH-------------------HHHH-------------HhCc----CE----EEEcCCCCHHHHHHHHHhhccccceEEE
Confidence 22 1121 1111 11 3468899999999999 888999
Q ss_pred Eeccc-----hhhHHHHHHHhCCcccc-----cccccCcCCCcccceEEEEE-----EcC--------eeEEEEeecCC-
Q psy14945 303 LRRAK-----RRNMERLSLACGGTAMN-----SVEGLEPAHLGYAGSVFEHV-----LGE--------EKFTFVEECKN- 358 (629)
Q Consensus 303 v~~v~-----~~dl~rIak~tGg~i~~-----s~~~l~~~~lG~~~~v~e~~-----i~~--------~~~~~~~~~~~- 358 (629)
+++.+ +.++++||++|||++++ ++.+++...+|+|+.+++.+ +++ +++.+|.+|..
T Consensus 330 Vk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~~~~ 409 (600)
T PLN03167 330 LKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNLIEA 409 (600)
T ss_pred EEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccHHHHHHHHHHHHhhhhc
Confidence 99885 66899999999999999 66778888899999999765 554 36666654430
Q ss_pred -----------------CccEEEE-ecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcC
Q psy14945 359 -----------------PQSVTIL-LKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVK 420 (629)
Q Consensus 359 -----------------~~~~TIl-l~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~ 420 (629)
+..++++ +||+++.+++|.+++++||+++++++++++ +|||||++|++++.+|++++..+.
T Consensus 410 ~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~g-vVpGGGa~el~ls~~L~~~~~~~~ 488 (600)
T PLN03167 410 AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLASKVDAIKDTLE 488 (600)
T ss_pred cCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHHHHHHHhcCC
Confidence 1246666 999999999999999999999999999999 999999999999999998877776
Q ss_pred cchH-HHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhh
Q psy14945 421 GKSR-LGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSW 499 (629)
Q Consensus 421 ~~~k-~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a 499 (629)
+.++ .+++.+++||+.||++|++|+|+|+.+++.+|+..+ +.++|+|+.++++.|+.+.|||||+.||+++|+.|
T Consensus 489 ~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~----~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~~A 564 (600)
T PLN03167 489 NDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSND----NPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHA 564 (600)
T ss_pred ChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhcC----CCCEeEeCCCCcCcchHhccCeecHHHHHHHHHHH
Confidence 6666 459999999999999999999999999999997432 35799999999999999999999999999999999
Q ss_pred hhcCCCCeEEe
Q psy14945 500 IISGLHPRVIT 510 (629)
Q Consensus 500 ~e~a~~~~iV~ 510 (629)
+++|...+.++
T Consensus 565 ~~~A~~iL~iD 575 (600)
T PLN03167 565 ASVAKTFLTSD 575 (600)
T ss_pred HHHHHHHHHHH
Confidence 99888776654
No 53
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.2e-35 Score=333.67 Aligned_cols=360 Identities=18% Similarity=0.241 Sum_probs=256.5
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH--------------------------hhcc-----
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV--------------------------NLKM----- 270 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~--------------------------~~~~----- 270 (629)
..||+++|+++.++.|++++|||||+|+.++++||++|..|++.+ ....
T Consensus 67 ~~hP~akll~~~a~~q~~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~ 146 (522)
T cd03340 67 IVHPAAKTLVDIAKSQDAEVGDGTTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEE 146 (522)
T ss_pred ccCHHHHHHHHHHHHhHhHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccc
Confidence 469999999999999999999999999999999999999999871 0000
Q ss_pred -ccccCccccccccccCCCHHHHHHHHHhCcEEEeccc---hhhHHHHHHHhCCccccccc----ccCcCCC-----ccc
Q psy14945 271 -HKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK---RRNMERLSLACGGTAMNSVE----GLEPAHL-----GYA 337 (629)
Q Consensus 271 -~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~---~~dl~rIak~tGg~i~~s~~----~l~~~~l-----G~~ 337 (629)
++.+..++.+++++|.+. ...++|.+..+.++..+. ..+.+++.+..|+++.+|.. .++.... ...
T Consensus 147 ~~~~l~~ia~t~l~sK~~~-~~~~~l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds~lv~Giv~~k~~~~~~~~~~~ 225 (522)
T cd03340 147 QRELLEKCAATALNSKLIA-SEKEFFAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDSQLVNGVAFKKTFSYAGFEQQP 225 (522)
T ss_pred cHHHHHHHHHHHhccCcch-hHHHHHHHHHHHHHHHhcccCChhHheEeeecCCChhhceeeeeEEEecccCccccccCC
Confidence 000112223455555442 233445555555554443 23567788889999998852 1222211 112
Q ss_pred ceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHH
Q psy14945 338 GSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWH 410 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~ 410 (629)
+ .+.+.+++++. ++ .....++.+.++.++ ..+...+.+.+.+..+.... -..|+..+|..+.+++
T Consensus 226 ~-----~~~n~kIll~~-~~Le~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g-~~vvl~~~~i~d~a~~- 297 (522)
T cd03340 226 K-----KFKNPKILLLN-VELELKAEKDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSG-ANVVLSKLPIGDLATQ- 297 (522)
T ss_pred c-----cccCCeEEEEe-CCCCCCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCCcHHHHH-
Confidence 2 24577887776 32 123457777666543 22333344544444332221 1346778888888885
Q ss_pred HHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-----------------C-----Cc
Q psy14945 411 ALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-----------------P-----GV 466 (629)
Q Consensus 411 ~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-----------------~-----~~ 466 (629)
||.+.+. .+....+..++++|++....+ +..+..+...+.| + + ..
T Consensus 298 ~l~~~~I~~~~~v~~~~l~rIa~~tGa~i-----------i~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~ 366 (522)
T cd03340 298 YFADRDIFCAGRVPEEDLKRVAQATGGSI-----------QTTVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKAKTC 366 (522)
T ss_pred HHHHCCcEEEEeCCHHHHHHHHHHHCCEE-----------eeccccCCccccccceEEEEEEECCEEEEEEECCCCCceE
Confidence 8888774 444456788999998865543 2222222211111 0 0 12
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|..++|+.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+..++++++++
T Consensus 367 TIllrG~t~~~l~E~er~i~Dal~~~~~~i~-------~~~vvpGGG~~E-~~ls~~l~~~~~~~~~~~~~~~~------ 432 (522)
T cd03340 367 TIILRGGAEQFIEEAERSLHDAIMIVRRAIK-------NDSVVAGGGAIE-MELSKYLRDYSRTIAGKQQLVIN------ 432 (522)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEECcCHHH-HHHHHHHHHHhccCCCHHHHHHH------
Confidence 3446777888999999999999999999997 899999999999 99999999998888999999998
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCC-ceeeEecCCCcccccccCCccccHHHHHHH
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPG-VAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 625 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~-~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~ 625 (629)
+|++||++||++||+|||+|+.+++.+|++.|++ ++ .++|+|+.+|++.||.+.|||||+.||+|+
T Consensus 433 ------------~fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~ 499 (522)
T cd03340 433 ------------AFAKALEIIPRQLCDNAGFDATDILNKLRQKHAQ-GGGKWYGVDINNEGIADNFEAFVWEPSLVKINA 499 (522)
T ss_pred ------------HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCCCeeeeeCCCCcccchhhcCceEcHHHHHHH
Confidence 5778888899999999999999999999999987 55 689999999999999999999999999999
Q ss_pred hhc
Q psy14945 626 INS 628 (629)
Q Consensus 626 i~~ 628 (629)
|++
T Consensus 500 i~~ 502 (522)
T cd03340 500 LTA 502 (522)
T ss_pred HHH
Confidence 974
No 54
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=1.7e-35 Score=332.25 Aligned_cols=361 Identities=18% Similarity=0.249 Sum_probs=259.2
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-------cc--ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-------KM--HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-------~~--~~~ 273 (629)
..||.++|+++.++.|++++|||||+|+.++++||++|..|++.+ .+ +. +..
T Consensus 67 ~~hP~a~ll~~~a~~qd~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~ 146 (519)
T TIGR02339 67 IEHPAAKMLVEVAKTQDAEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDL 146 (519)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHH
Confidence 469999999999999999999999999999999999999999771 00 00 011
Q ss_pred cCccccccccccCCC----HHHHHHHHHhCcEEEecc--c--hh--hHHHHHHHhCCccccccc--c--cCcCC--Cccc
Q psy14945 274 APDCSTSDRYRTGID----PQSLDLFAREGIIALRRA--K--RR--NMERLSLACGGTAMNSVE--G--LEPAH--LGYA 337 (629)
Q Consensus 274 l~v~~~~~l~~k~i~----~~~~~~la~~~I~vv~~v--~--~~--dl~rIak~tGg~i~~s~~--~--l~~~~--lG~~ 337 (629)
+..++.+++++|-++ +.+.++++++...+.+.. . .+ +++++.+..|+++.+|.. . ++... -+..
T Consensus 147 L~~ia~tsl~sk~~~~~~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds~lv~G~vi~~~~~~~~m~ 226 (519)
T TIGR02339 147 LKKVAETSLTGKASAEVTKDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDTELVEGIVVDKEPVHPGMP 226 (519)
T ss_pred HHHHHHhhhccccccchhHHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcceeEeeEEEecCCCCCCCc
Confidence 122333455565442 334444444443332210 1 12 355677899999987742 1 22221 1112
Q ss_pred ceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHH
Q psy14945 338 GSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWH 410 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~ 410 (629)
..+.+.+++++. |+ .....++.+..+.+. .++.-+..++..+..+.... -+.|+..++..+++++
T Consensus 227 -----~~i~n~kIlll~-~~Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g-~~lvi~~~~I~~~al~- 298 (519)
T TIGR02339 227 -----KRVKNAKIALLD-APLEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAG-ANVVFCQKGIDDLAQH- 298 (519)
T ss_pred -----cccCCCcEEEEe-ccccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEECCCccHHHHH-
Confidence 235578888876 33 225677888777644 33444455555555554332 2457888899999996
Q ss_pred HHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------CC---c
Q psy14945 411 ALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------PG---V 466 (629)
Q Consensus 411 ~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~~---~ 466 (629)
+|.+++. .+....+..++++|++....+ +..++.+...+.| + +. .
T Consensus 299 ~L~~~gI~~v~~v~~~~L~rIa~~tGa~i-----------i~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~ 367 (519)
T TIGR02339 299 YLAKAGILAVRRVKKSDIEKLARATGAKI-----------VSSIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNPKAV 367 (519)
T ss_pred HHHHCCCEEEecCCHHHHHHHHHHhCCEE-----------eCchhhCChhhccCCceEEEEEECCeEEEEEEcCCCCCEE
Confidence 7776664 455667889999998855433 2222222222222 0 01 1
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|...+++.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+.+++++++++
T Consensus 368 TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~-------~~~vvpGGGa~e-~~ls~~l~~~~~~~~~~~~~~~~------ 433 (519)
T TIGR02339 368 TILLRGGTEHVVDELERSIQDALHVVASALE-------DGKVVAGGGAVE-IELALRLRSYARKIGGREQLAIE------ 433 (519)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHhc-------CCCEeeCCCHHH-HHHHHHHHHHhhcCCCHHHHHHH------
Confidence 3345777889999999999999999999997 999999999999 99999999998888999999998
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++|||+||++||+|||+|+.+++++|++.|++ ++.++|+|+.+|++.||.+.|||||+.||+++|
T Consensus 434 ------------~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l 500 (519)
T TIGR02339 434 ------------AFADALEEIPRILAENAGLDPIDALVELRAKHEK-GNKNAGINVFTGEIEDMLELGVIEPLRVKEQAI 500 (519)
T ss_pred ------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-cCCceeEEcCCCCccchhhccceEcHHHHHHHH
Confidence 5777888899999999999999999999999976 467899999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
+.
T Consensus 501 ~~ 502 (519)
T TIGR02339 501 KS 502 (519)
T ss_pred HH
Confidence 74
No 55
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.7e-35 Score=331.13 Aligned_cols=372 Identities=17% Similarity=0.202 Sum_probs=258.1
Q ss_pred eccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh----c-c-----c
Q psy14945 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL----K-M-----H 271 (629)
Q Consensus 221 ~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~----~-~-----~ 271 (629)
+.+||+++|+++.++.|++++|||||+++.++++||++|..|++++ .+ . + +
T Consensus 58 ~~~hP~akll~~~a~~q~~~~GDGTTt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~ 137 (527)
T cd03335 58 EVEHPAAKILVELAQLQDKEVGDGTTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGK 137 (527)
T ss_pred cccChHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCH
Confidence 3479999999999999999999999999999999999999999871 00 0 0 0
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccc----------hhhHHHHHHHhCCcccccc--cc--cCcCC--Cc
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK----------RRNMERLSLACGGTAMNSV--EG--LEPAH--LG 335 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~----------~~dl~rIak~tGg~i~~s~--~~--l~~~~--lG 335 (629)
..+..++.+++++|.++.. .++|++..+.++..+. ..+.+++.+..|+++.++. +. ++... .+
T Consensus 138 ~~l~~ia~tsl~sK~~~~~-~~~ls~l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s~li~Givi~~~~~~~~ 216 (527)
T cd03335 138 ESLINVAKTSMSSKIIGAD-SDFFANMVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKESYLVNGYALNCTRASQG 216 (527)
T ss_pred HHHHHHHHHHhcccccchh-HHHHHHHHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhcceeeeEEEecccCCCC
Confidence 0011122345556655332 3455555444444431 1145677788899888774 21 22211 12
Q ss_pred ccceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHH
Q psy14945 336 YAGSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAA 408 (629)
Q Consensus 336 ~~~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l 408 (629)
... .+.+.+++++. ++ .....++.+..+.+. ..+.-++.+...+..+.... -+.|+..+|..+.++
T Consensus 217 m~~-----~i~n~kIlll~-~~Le~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g-~~lvi~~k~I~d~al 289 (527)
T cd03335 217 MPT-----RVKNAKIACLD-FNLQKTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAG-ANVVLTTGGIDDMCL 289 (527)
T ss_pred Ccc-----cccCCcEEEEe-ccCCCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEeCCCCcHHHH
Confidence 222 34578888776 32 124566666666643 22222344555554443322 245788889999999
Q ss_pred HHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHH-----------HhcCCChHHHHHHHHH---hhc-CCCC---ceEE
Q psy14945 409 WHALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIA-----------VNSGFDAQDTLVKLQE---ACG-EAPG---VAVG 469 (629)
Q Consensus 409 ~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~-----------~NaG~d~~~vl~~L~~---~~~-~~~~---~~~G 469 (629)
+ ||.+++. .+....+..++++|++....+-.-. ...|+.......++.. -+. +.++ .++-
T Consensus 290 ~-~L~~~~I~~v~~v~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~~~~~TIl 368 (527)
T cd03335 290 K-YFVEAGAMAVRRVKKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKKRSSASII 368 (527)
T ss_pred H-HHHHCCcEEEEeCCHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCCCCEEEEE
Confidence 6 8877664 4445578899999998665442110 0122211100000000 000 0011 2344
Q ss_pred EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhh
Q psy14945 470 VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTK 549 (629)
Q Consensus 470 id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~ 549 (629)
+++.|..++++.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+.+++++++++
T Consensus 369 lrG~t~~~l~e~er~i~Dal~~~~~~~~-------~~~vvpGGGa~e-~~ls~~L~~~~~~~~~~~~~~i~--------- 431 (527)
T cd03335 369 LRGANDFMLDEMERSLHDALCVVKRTLE-------SNSVVPGGGAVE-TALSIYLENFATTLGSREQLAIA--------- 431 (527)
T ss_pred EeCCcHHHHHHHHHHHHHHHHHHHHHhh-------CCCEeeCCCHHH-HHHHHHHHHHHhccCcHHHHHHH---------
Confidence 6788899999999999999999999997 999999999999 99999999999888999999998
Q ss_pred hHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCC--------CceeeEecCCCcccccccCCccccHHH
Q psy14945 550 VERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAP--------GVAVGVDVNSGEVLNPTSAGIYDNLTV 621 (629)
Q Consensus 550 ~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~--------~~~~Gvd~~~g~i~d~~~~gI~dp~~v 621 (629)
+|++||++||++||+|||+|+.+++.+|++.|.+ + +.++|+|+.+|+++||.+.|||||+.|
T Consensus 432 ---------~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~-~~~~~~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~~ 501 (527)
T cd03335 432 ---------EFAEALLVIPKTLAVNAAKDATELVAKLRAYHAA-AQVKPDKKHLKWYGLDLINGKVRDNLEAGVLEPTVS 501 (527)
T ss_pred ---------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh-cCCccccccCceEeEECCCCcccchhhccceecHHH
Confidence 5778888899999999999999999999999976 4 357999999999999999999999999
Q ss_pred HHHHhhc
Q psy14945 622 KRQIINS 628 (629)
Q Consensus 622 K~~~i~~ 628 (629)
|.++|++
T Consensus 502 k~~~i~~ 508 (527)
T cd03335 502 KIKSLKF 508 (527)
T ss_pred HHHHHHH
Confidence 9999975
No 56
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.8e-35 Score=329.37 Aligned_cols=360 Identities=17% Similarity=0.238 Sum_probs=252.9
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----ccc------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KMH------ 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~~------ 271 (629)
..||+++|+++.++.|++++|||||+|+.++++||++|..|++.+ .+ ...
T Consensus 68 ~~hP~a~ll~~~a~~q~~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~ 147 (522)
T TIGR02345 68 IVHPAAKTLVDIAKSQDSEVGDGTTSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQ 147 (522)
T ss_pred ccChHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCccccc
Confidence 469999999999999999999999999999999999999999871 00 001
Q ss_pred -cccCccccccccccCCCHHHHHHHHHhCcEEEeccch----hhHHHHHHHhCCccccccc--c--cCcCC-----Cccc
Q psy14945 272 -KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR----RNMERLSLACGGTAMNSVE--G--LEPAH-----LGYA 337 (629)
Q Consensus 272 -~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~----~dl~rIak~tGg~i~~s~~--~--l~~~~-----lG~~ 337 (629)
+.+..++.+++.+|.+. ...++|++..+.++..+.. .+..++.+..|+++.+|.. . ++... ....
T Consensus 148 ~~~l~~va~tsl~sK~~~-~~~~~l~~l~~~A~~~v~~~~~~~~~I~i~ki~Ggs~~ds~~v~Giv~~~~~~~~~~~~~~ 226 (522)
T TIGR02345 148 REVLEKCAATALNSKLIA-HEKEFFSKMIVDAVLQLDIDDLDLKLIGVKKVQGGSLQDSVLVNGVAFKKTFSYAGFEQQP 226 (522)
T ss_pred HHHHHHHHHHHhcccccc-chHHHHHHHHHHHHHHHhhccCChhHheEEeecCCCHHhcceecceEEecccCccccccCC
Confidence 01112223455555432 2234455555555554431 2466788889999999853 1 22221 1112
Q ss_pred ceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHH
Q psy14945 338 GSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWH 410 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~ 410 (629)
..+.+.++++++ ++ .....++++.+.+++ ..+.....+.+.+..+.... -+.++..+|..+.+.+
T Consensus 227 -----~~~~n~kIll~~-~~Le~~~~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g-~~vv~~~~~i~d~~~~- 298 (522)
T TIGR02345 227 -----KKFANPKILLLN-VELELKAEKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESG-ANVVLSKLPIGDLATQ- 298 (522)
T ss_pred -----ceeccceEEEEe-cCcccCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEeCCCccHHHHH-
Confidence 224577777775 22 123466777666642 11222223333332221111 1346777788888875
Q ss_pred HHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-----------------CC-----c
Q psy14945 411 ALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-----------------PG-----V 466 (629)
Q Consensus 411 ~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-----------------~~-----~ 466 (629)
||.+.+. ......+..+++++++....+ +..+..+...+.| + +. .
T Consensus 299 ~L~~~~I~~~~~v~~~dl~ria~~tga~i-----------i~~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~~~~ 367 (522)
T TIGR02345 299 YFADHNIFCAGRVSDEDLKRVVKACGGSI-----------QSTTSDLEADVLGTCALFEERQIGSERYNYFTGCPHAKTC 367 (522)
T ss_pred HHHHCCcEEEecCCHHHHHHHHHHhCCeE-----------EcchhhCChhhccCCceEEEEEECCeEEEEEEcCCCCceE
Confidence 8888875 444456777888888755433 2222222211111 0 11 2
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.+++++++++
T Consensus 368 TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~-------~~~vvpGGG~~e-~~ls~~l~~~~~~~~~~~~~~i~------ 433 (522)
T TIGR02345 368 TIILRGGAEQFIEEAERSLHDAIMIVRRALK-------ARKIVAGGGAIE-MELSKILREHSKKIDGKQQLIIE------ 433 (522)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEeCCCHHH-HHHHHHHHHHHhhCCCHHHHHHH------
Confidence 3446778899999999999999999999997 899999999999 99999999998888999999998
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++.+|++.|++ ++.++|+|+.+|++.||.+.|||||+.||+++|
T Consensus 434 ------------~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~-~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l 500 (522)
T TIGR02345 434 ------------AFAKALEIIPRSLCENAGFDSIEILNKLRSRHAK-GGKWYGVDINTEDIGDNFENFVWEPLLVKKNAL 500 (522)
T ss_pred ------------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-CCCccceeCCCCcccchhhcCceEcHHHHHHHH
Confidence 5777888899999999999999999999999987 566899999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 501 ~~ 502 (522)
T TIGR02345 501 KA 502 (522)
T ss_pred HH
Confidence 74
No 57
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.9e-35 Score=327.17 Aligned_cols=336 Identities=18% Similarity=0.242 Sum_probs=234.2
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc-----------------------------cc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM-----------------------------HK 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~-----------------------------~~ 272 (629)
..||.++|+++.++.|++++|||||+|+.++++||++|..|++++ ..| ++
T Consensus 67 ~~hP~a~ll~~~a~~q~~~~GDGTtt~vvL~~~Ll~~a~~li~~g-i~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~ 145 (480)
T cd03337 67 VAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEILAVAEPFLERG-IHPTVIIKAYRKALEDALKILEEISIPVDVNDRA 145 (480)
T ss_pred ccChHHHHHHHHHHhHHHHhCCCcchhHhhHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHhccccccCCHH
Confidence 479999999999999999999999999999999999999999871 000 00
Q ss_pred ccCccccccccccCCCHHHHHHHHHhCcEEEeccc--------hhh---HHHHHHHhCCccccccc--c--cCcCCC--c
Q psy14945 273 FAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK--------RRN---MERLSLACGGTAMNSVE--G--LEPAHL--G 335 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~--------~~d---l~rIak~tGg~i~~s~~--~--l~~~~l--G 335 (629)
.+.-++.+++++|.++. ..+.|++..+.++..+. ..| +++|.+..|+++.+|.. . ++.... +
T Consensus 146 ~l~~i~~t~l~sK~~~~-~~~~ls~lv~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds~li~Gvvi~k~~~~~~ 224 (480)
T cd03337 146 QMLKIIKSCIGTKFVSR-WSDLMCNLALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDSRVLDGVMLNKDVTHPK 224 (480)
T ss_pred HHHHHHHHHhccCcchh-HHHHHHHHHHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhcccccceEEeccCCCCC
Confidence 01112224455554432 23333333333333321 112 24567777887777631 1 221111 1
Q ss_pred ccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 336 YAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 336 ~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
.. .++.+.++++++ |+- ++ .++..+|..+.+++ +|.++
T Consensus 225 m~-----~~~~n~kIlll~-~~L------------e~-----------------------lvi~~k~I~d~al~-~L~~~ 262 (480)
T cd03337 225 MR-----RRIENPRIVLLD-CPL------------EY-----------------------LVITEKGVSDLAQH-YLVKA 262 (480)
T ss_pred CC-----cEecCCCEEEEe-cCc------------ce-----------------------EEEeCCCccHHHHH-HHHHC
Confidence 11 123456666554 221 11 37788888999986 77766
Q ss_pred hh-hcCcchHHHHHHHHHHHhhhhHH-----HHHhcCC-ChHHHHHHHHH---hhc-CCC-C--ceEEEEeccCCCCCCC
Q psy14945 416 KN-TVKGKSRLGIQAYAEALLIIPKT-----IAVNSGF-DAQDTLVKLQE---ACG-EAP-G--VAVGVDVNSGEVLNPT 481 (629)
Q Consensus 416 ~~-~i~~~~k~~i~~fa~ALe~ip~~-----L~~NaG~-d~~~vl~~L~~---~~~-~~~-~--~~~Gid~~t~~i~d~~ 481 (629)
+. .+....+..++++|++....+-. -.+..|+ ........... ... +.+ . .++-+++.|...+++.
T Consensus 263 ~I~~v~~v~~~~L~rIa~~tGa~ii~~~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~~~~TIllrG~t~~~l~e~ 342 (480)
T cd03337 263 GITALRRVRKTDNNRIARACGATIVNRPEELTESDVGTGAGLFEVKKIGDEYFTFITECKDPKACTILLRGASKDVLNEV 342 (480)
T ss_pred CcEEEEeCCHHHHHHHHHHHCCEEecchhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCCCEEEEEEECCCHHHHHHH
Confidence 64 44556788899999886544311 1112333 11100000000 000 001 1 2344678889999999
Q ss_pred cccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccC
Q psy14945 482 SAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEP 561 (629)
Q Consensus 482 e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a 561 (629)
++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++ +|+
T Consensus 343 er~l~DAl~v~~~~~~-------~~~~vpGGGa~E-~~ls~~l~~~~~~~~~~~~~~~~------------------~~a 396 (480)
T cd03337 343 ERNLQDAMAVARNIIL-------NPKLVPGGGATE-MAVSHALSEKAKSIEGVEQWPYK------------------AVA 396 (480)
T ss_pred HHHHHHHHHHHHHHhc-------CCCEEeCCCHHH-HHHHHHHHHHhhcCCCHHHHHHH------------------HHH
Confidence 9999999999999997 999999999999 99999999999888999999998 577
Q ss_pred CchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCC-CceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 562 NSVPSLRNSATVNSGFDAQDTLVKLQEACGEAP-GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 562 ~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~-~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+||++||++||+|||+|+.+++++|++.|.+ + +.++|+|+.+|++.||.+.|||||+.+|+++|++
T Consensus 397 ~al~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~~ 463 (480)
T cd03337 397 SALEVIPRTLAQNCGANVIRTLTELRAKHAQ-GENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKT 463 (480)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-cCCCeECeeccCCCcccchhccCeEcHHHHHHHHHH
Confidence 8888899999999999999999999999987 5 5689999999999999999999999999999974
No 58
>KOG0363|consensus
Probab=100.00 E-value=1.2e-35 Score=300.49 Aligned_cols=354 Identities=19% Similarity=0.277 Sum_probs=239.6
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH------H--------------------hh-----cc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE------V--------------------NL-----KM 270 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~------~--------------------~~-----~~ 270 (629)
..+|++++++.-++.||+++|||||||..++.|||++|+.|+.. + .+ +.
T Consensus 71 vDnpaAkvLv~~S~vQD~EvGDGTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kf 150 (527)
T KOG0363|consen 71 VDNPAAKVLVDISKVQDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKF 150 (527)
T ss_pred CCCchhhheeccccccccccCCCceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH
Confidence 35799999999999999999999999999999999999999975 1 00 01
Q ss_pred ccccCccccccccccCCCHHHHHHHHHhCcEEEeccchh---hHHHHHHHhCCcccccccc---cCcCCCc--ccceEEE
Q psy14945 271 HKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR---NMERLSLACGGTAMNSVEG---LEPAHLG--YAGSVFE 342 (629)
Q Consensus 271 ~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~---dl~rIak~tGg~i~~s~~~---l~~~~lG--~~~~v~e 342 (629)
+..++..+.+.|++|.. ..-.++|++.++.++.+++.+ +.++|-|+.||++.+|+-+ +-...+| .+++
T Consensus 151 r~DLl~iarTTL~SKiL-sq~kehFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dSfLDeGFlL~K~igv~qpkr--- 226 (527)
T KOG0363|consen 151 REDLLKIARTTLSSKIL-SQDKEHFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDSFLDEGFLLDKKIGVNQPKR--- 226 (527)
T ss_pred HHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHhcCCCCccceeeehhcCCccccccccccceeccccCCCCccc---
Confidence 22344455567777766 345788999999999988633 6789999999999999732 2222233 3333
Q ss_pred EEEcCeeEEEEeecCCC-----ccEEEEecCCCccCHHHHHHHHHhh-HHHHHHHhhCCCcccCCChHHHHHHHHHHhhh
Q psy14945 343 HVLGEEKFTFVEECKNP-----QSVTILLKGPNKHTLAQTKDAVRDG-LRAIKNTIDDGAVVPGAGAFEVAAWHALQNYK 416 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~~~-----~~~TIll~g~~~~~l~e~~r~i~da-l~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~ 416 (629)
+.+.++.+-...-++ -++.+.+.+-. .+.|++++=+.. -..+..+.+.+ +.-+-..+.+.+|.
T Consensus 227 --iena~iLIANT~mDtDKvKvfGarvrVds~~--klaelE~AEkeKmK~KV~kI~~hg-------iN~FiNRQLiYnyP 295 (527)
T KOG0363|consen 227 --IENAKILIANTPMDTDKVKVFGARVRVDSTA--KLAELEKAEKEKMKEKVEKILKHG-------INVFINRQLIYNYP 295 (527)
T ss_pred --ccccceEEecCCCcccceeeecceEeecchh--HHHHHHHHHHHHHHHHHHHHHhcC-------CcEEeehhHhhcCH
Confidence 346665554311111 12233333222 222222221111 11122222222 10001112222222
Q ss_pred h---------hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHH-----------HHhhcC-----------CC-
Q psy14945 417 N---------TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKL-----------QEACGE-----------AP- 464 (629)
Q Consensus 417 ~---------~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L-----------~~~~~~-----------~~- 464 (629)
. .+..-.-.++++++-. +|.....++... ...+.+ .|
T Consensus 296 eqLf~dagi~aIEHADFdGiERLalv-----------tGGeI~STFd~p~~~klG~C~~IeeimiGed~li~FSGv~~Ge 364 (527)
T KOG0363|consen 296 EQLFADAGIMAIEHADFDGIERLALV-----------TGGEIVSTFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKLGE 364 (527)
T ss_pred HHHHhhcCcceeecccchhHHHHhhc-----------ccceeeeccCCcchhccccchhhHHHhcCccceeeeccccccc
Confidence 1 1121222345555433 232222222111 111111 01
Q ss_pred CceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHH
Q psy14945 465 GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVART 544 (629)
Q Consensus 465 ~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 544 (629)
-+++.+++.|.+++|+.||+++|++||.-+..+ +++++.|||+.| |.++..+.+++.+.+|++..+++
T Consensus 365 ActIVlrGat~q~LDEaeRslHDALcVLaqtv~-------esrvv~GgG~sE-m~Ma~av~~~A~~~pGkea~Aie---- 432 (527)
T KOG0363|consen 365 ACTIVLRGATQQILDEAERSLHDALCVLAQTVK-------ESRVVLGGGCSE-MLMAKAVDKEAQETPGKEALAIE---- 432 (527)
T ss_pred ceEEEEecccHHHHHHHHHHHHHHHHHHHHHhc-------cceeeecCCcHH-HHHHHHHHHHHhhCCchhhHHHH----
Confidence 134567888999999999999999999988876 999999999999 99999999999999999999988
Q ss_pred HhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHH
Q psy14945 545 SLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 624 (629)
Q Consensus 545 al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~ 624 (629)
+|++||..||.+||+|||||+.+++++||+.|+. |+.++|+|+++|++.||.+.||+|+|.||++
T Consensus 433 --------------AfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~-g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~~ 497 (527)
T KOG0363|consen 433 --------------AFARALRQLPTIIADNAGYDSAELVAQLRAEHYN-GRTTMGLDVRNGEIGDMRELGIVESLKVKQA 497 (527)
T ss_pred --------------HHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhc-CCcccccccccCchhhHHHhhhHHHHHHHHH
Confidence 4666777799999999999999999999999988 8899999999999999999999999999999
Q ss_pred Hhhc
Q psy14945 625 IINS 628 (629)
Q Consensus 625 ~i~~ 628 (629)
.+.+
T Consensus 498 vv~s 501 (527)
T KOG0363|consen 498 VVSS 501 (527)
T ss_pred HHhh
Confidence 8754
No 59
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=8.5e-35 Score=326.77 Aligned_cols=360 Identities=20% Similarity=0.281 Sum_probs=256.4
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~----~~~ 273 (629)
..||.++|+++.++.|++++|||||+++.+++++|+++..|++.+ .+ .. +..
T Consensus 66 ~~hP~a~ll~~~a~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~ 145 (517)
T cd03343 66 IEHPAAKMLVEVAKTQDEEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDT 145 (517)
T ss_pred CcCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHH
Confidence 479999999999999999999999999999999999999999761 00 00 000
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccc-------hh--hHHHHHHHhCCccccccc--c--cCcCC--Ccccc
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK-------RR--NMERLSLACGGTAMNSVE--G--LEPAH--LGYAG 338 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~-------~~--dl~rIak~tGg~i~~s~~--~--l~~~~--lG~~~ 338 (629)
+.-++.+++++|.+ ....++|++..+.++..+. .. +.+++.+..|+++.+|.. . ++... -+..
T Consensus 146 l~~va~ts~~sk~~-~~~~~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds~lv~G~v~~~~~~~~~m~- 223 (517)
T cd03343 146 LRKIAKTSLTGKGA-EAAKDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDTELIRGIVIDKEVVHPGMP- 223 (517)
T ss_pred HHHHHHHhhcccch-hhHHHHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHcceeeeEEEeccCCCCCCc-
Confidence 11122234444433 2223444444444443331 11 346777789999987742 1 32221 1111
Q ss_pred eEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 339 SVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
..+.+.+++++. ++ .....++.+..+.+. .++.-++.+...+..+...- -+.|+..+|..+++++ |
T Consensus 224 ----~~~~n~~Illl~-~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g-~~lvi~~~~I~~~al~-~ 296 (517)
T cd03343 224 ----KRVENAKIALLD-APLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTG-ANVVFCQKGIDDLAQH-Y 296 (517)
T ss_pred ----cccCCCcEEEEe-ccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCccHHHHH-H
Confidence 234577888776 32 124677777776544 33344455555555454332 2567888999999996 7
Q ss_pred HHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------CC---ce
Q psy14945 412 LQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------PG---VA 467 (629)
Q Consensus 412 L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~~---~~ 467 (629)
|.+.+. .+....+..++++|++....+ +..+..+...+.+ + ++ .+
T Consensus 297 l~~~gI~~v~~v~~~~l~~Ia~~tGa~i-----------i~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~~~T 365 (517)
T cd03343 297 LAKAGILAVRRVKKSDMEKLARATGAKI-----------VTNIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNPKAVT 365 (517)
T ss_pred HhHCCcEEEEeCCHHHHHHHHHHhCCEE-----------ecchhhCChhhCCccceEEEEEECCeEEEEEEcCCCCceEE
Confidence 766653 455567888899888855433 2223333222222 0 11 13
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|...+|+.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 366 I~lrG~t~~~l~e~~~~l~Dal~~~~~~~~-------~~~vvpGGG~~e-~~ls~~L~~~~~~~~~~~~~~~~------- 430 (517)
T cd03343 366 ILLRGGTEHVVDELERALEDALRVVADALE-------DGKVVAGGGAVE-IELAKRLREYARSVGGREQLAVE------- 430 (517)
T ss_pred EEEECCcHHHHHHHHHHHHHHHHHHHHHHh-------CCCeeeCCCHHH-HHHHHHHHHHHhcCCCHHHHHHH-------
Confidence 445677889999999999999999999997 999999999999 99999999998888999999998
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++|||.||++||+|||+|+.+++.+|++.|.+ ++.++|+|+.+|.+.||.+.|||||+.||+|+|+
T Consensus 431 -----------~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~ 498 (517)
T cd03343 431 -----------AFADALEEIPRTLAENAGLDPIDTLVELRAAHEK-GNKNAGLDVYTGEVVDMLEKGVIEPLRVKKQAIK 498 (517)
T ss_pred -----------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-cCCceeeecCCCCccchhhcCceecHHHHHHHHH
Confidence 5777888899999999999999999999999976 5678999999999999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 499 ~ 499 (517)
T cd03343 499 S 499 (517)
T ss_pred H
Confidence 4
No 60
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=7.2e-35 Score=327.33 Aligned_cols=370 Identities=18% Similarity=0.238 Sum_probs=257.5
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc-----c--c----
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK-----M--H---- 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~-----~--~---- 271 (629)
..||+++|+++.++.|++++|||||+|+.++++||++|+.|++.+ .++ + +
T Consensus 69 ~~hP~akll~e~a~sqd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 148 (531)
T TIGR02346 69 VQHPAAKLLVMASEMQENEIGDGTNLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNK 148 (531)
T ss_pred ccCHHHHHHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCH
Confidence 469999999999999999999999999999999999999999871 000 0 0
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccch-------hhHHHHHHHhCCccccccc----ccCcCCCcccceE
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-------RNMERLSLACGGTAMNSVE----GLEPAHLGYAGSV 340 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-------~dl~rIak~tGg~i~~s~~----~l~~~~lG~~~~v 340 (629)
..+..++.+++++|.++. .++|++..+.++..+.. .+.+++.++.|+++.++.. .++....+..+
T Consensus 149 ~~l~~i~~tsl~sK~~~~--~~~ls~l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds~li~Gi~~~~~~~~~~k-- 224 (531)
T TIGR02346 149 KELIKALKASISSKQYGN--EDFLAQLVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNSEVLKGMVFNREAEGSVK-- 224 (531)
T ss_pred HHHHHHHHHHhccccCch--HHHHHHHHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhceeEeeeEEeccCCCCce--
Confidence 001111113455555543 55566666666554421 2456777889998887742 13333223332
Q ss_pred EEEEEcCeeEEEEeecC----CCc-cEEEEecCCCccC--HHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHH
Q psy14945 341 FEHVLGEEKFTFVEECK----NPQ-SVTILLKGPNKHT--LAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQ 413 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~----~~~-~~TIll~g~~~~~--l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~ 413 (629)
.+.+.++.++. ++ .+. ..++.+..+.++. .+.-...+...+..+.... -+.|+...|..+.+++ +|.
T Consensus 225 ---~i~n~kI~l~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g-~~lvi~~~~I~d~~~~-~l~ 298 (531)
T TIGR02346 225 ---RVKNAKVAVFS-CPLDTATTETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSG-VNVIVTGGSVGDMALH-YCE 298 (531)
T ss_pred ---eccCCCEEEEe-cCcCCCcccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEECCCcCHHHHH-HHH
Confidence 35578888886 33 223 6788888877652 1111344555555443332 2457888888888885 777
Q ss_pred hhhh-hcCcchHHHHHHHHHHHhhhhHHHH-----HhcCCChHHHHHHHHH---hhc-CCC--C--ceEEEEeccCCCCC
Q psy14945 414 NYKN-TVKGKSRLGIQAYAEALLIIPKTIA-----VNSGFDAQDTLVKLQE---ACG-EAP--G--VAVGVDVNSGEVLN 479 (629)
Q Consensus 414 ~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~-----~NaG~d~~~vl~~L~~---~~~-~~~--~--~~~Gid~~t~~i~d 479 (629)
+.+. .+.......++.+|.+....+-.-. +..|.-......++-. ... +.. . .++-+++.|..+++
T Consensus 299 ~~~I~av~~~~~~~l~~Ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~~~~~~tI~lrG~t~~~l~ 378 (531)
T TIGR02346 299 KYNIMVLKIPSKFELRRLCKTVGATPLARLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENGDSKISTIILRGSTKNLLD 378 (531)
T ss_pred HCCcEEEecCCHHHHHHHHHHHCCEEecccccCCHhHccccceEEEEEECCEEEEEEEccCCCCCeEEEEEECCCHHHHH
Confidence 6653 4455566788888887654432111 1122110000000000 000 000 1 23446777889999
Q ss_pred CCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhc
Q psy14945 480 PTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLA 559 (629)
Q Consensus 480 ~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~ 559 (629)
+.++.+.|++++.+++++ ++++|||||++| ++++..|++++....++++++++ +
T Consensus 379 E~er~i~DAl~~~k~ai~-------~~~vVpGGG~~e-~~ls~~L~~~~~~~~~~~~~~~~------------------~ 432 (531)
T TIGR02346 379 DIERAIDDGVNVIKALVK-------DNRFLPGAGATE-IELALRLKKYANKLPGLDQYAIK------------------K 432 (531)
T ss_pred HHHHHHHHHHHHHHHHhc-------CCCEEECcCHHH-HHHHHHHHHHhccCCCHHHHHHH------------------H
Confidence 999999999999999997 999999999999 99999999998888899999988 5
Q ss_pred cCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCc--ccccccCCccccHHHHHHHhhc
Q psy14945 560 EPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGE--VLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 560 ~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~--i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
|++||+.||++||+|||+|+.+++.+|+..|++ ++.++|+|+.+|. +.||.+.|||||+.||+++|++
T Consensus 433 ~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~Gid~~~~~~~i~d~~~~gI~dp~~vk~~~l~~ 502 (531)
T TIGR02346 433 FAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKK-GNTSSGIDIEAESDGVKDASEAGIYDNLATKKWAIKL 502 (531)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-cCCccceeeeCCCccccChhhcCceEcHHHHHHHHHH
Confidence 777888899999999999999999999999976 5668999999999 6999999999999999999974
No 61
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.7e-35 Score=325.58 Aligned_cols=335 Identities=26% Similarity=0.308 Sum_probs=240.1
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----ccc-----c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KMH-----K 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~~-----~ 272 (629)
..||+++|+++.++.|++++|||||+++.++++||++|..|++.+ .+ ..+ +
T Consensus 63 ~~hP~a~l~~~~a~~qd~~~GDGTTt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~ 142 (484)
T cd03342 63 IQHPTASMIARAATAQDDITGDGTTSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRE 142 (484)
T ss_pred CcCHHHHHHHHHHHHhhhHhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHH
Confidence 479999999999999999999999999999999999999999761 00 000 0
Q ss_pred ccCccccccccccCCCHHHHHHHHHhCcEEEeccc----h--hhHHHHHHHhCCccccccc--c--cCcCCCcccceEEE
Q psy14945 273 FAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK----R--RNMERLSLACGGTAMNSVE--G--LEPAHLGYAGSVFE 342 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~----~--~dl~rIak~tGg~i~~s~~--~--l~~~~lG~~~~v~e 342 (629)
.+.-++.+++.+|.++ ...++|++..+.++..+. . .+++++.+..|+++.++.. . ++... ...-..
T Consensus 143 ~l~~va~ts~~sk~~~-~~~~~l~~l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds~~i~G~~~~~~~---~~~~m~ 218 (484)
T cd03342 143 LLLSVARTSLRTKLHA-DLADQLTEIVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDTKLIRGLVLDHGA---RHPDMP 218 (484)
T ss_pred HHHHHHHHHhCcccch-hHHHHHHHHHHHHHHHHhhcCCccChhHeEEEEecCCChhhceEEeeEEEecCC---CCCCCC
Confidence 0111222344454332 233445555555554442 1 1456788888998877741 1 22111 000001
Q ss_pred EEEcCeeEEEEeecCC----C-ccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh
Q psy14945 343 HVLGEEKFTFVEECKN----P-QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN 417 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~~----~-~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~ 417 (629)
..+.+.++.+++ |+- + ...++.+. .|+..+|..+.+++ +|.+.+.
T Consensus 219 ~~~~n~~Ill~~-~~le~~~~~~~~~~~~~----------------------------lvi~~~~I~~~al~-~l~~~~I 268 (484)
T cd03342 219 KRVENAYILTCN-VSLEYEKTEVNSGFFYS----------------------------VVINQKGIDPPSLD-MLAKEGI 268 (484)
T ss_pred ccccCceEEEEe-CCCCCCccccCcEEEEE----------------------------EEEeCCCccHHHHH-HHHHCCC
Confidence 234577777775 331 1 12222221 37788899999996 7766653
Q ss_pred -hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC--------------------CCC---ceEEEEec
Q psy14945 418 -TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE--------------------APG---VAVGVDVN 473 (629)
Q Consensus 418 -~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~--------------------~~~---~~~Gid~~ 473 (629)
.+....+..++++|++....+ +..+..+...+.| .+. .++-+++.
T Consensus 269 ~av~~~~~~~l~~ia~~tGa~i-----------i~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~tI~lrg~ 337 (484)
T cd03342 269 LALRRAKRRNMERLTLACGGVA-----------MNSVDDLSPECLGYAGLVYERTLGEEKYTFIEGVKNPKSCTILIKGP 337 (484)
T ss_pred eEEEeCCHHHHHHHHHHhCCEE-----------ecccccCChhhCcccceEEEEEECCeEEEEEECCCCCcEEEEEEeCC
Confidence 445567888999998865443 2222222211111 011 13345777
Q ss_pred cCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHH
Q psy14945 474 SGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERE 553 (629)
Q Consensus 474 t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 553 (629)
|..++|+.+|.+.|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 338 t~~~l~E~er~l~DAl~~vk~~~~-------~~~~vpGGGa~e-~~ls~~L~~~~~~~~~~~~~~i~------------- 396 (484)
T cd03342 338 NDHTITQIKDAIRDGLRAVKNAIE-------DKCVVPGAGAFE-VALYAHLKEFKKSVKGKAKLGVQ------------- 396 (484)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhc-------CCcEEeCCCHHH-HHHHHHHHHHhhcCCCHHHHHHH-------------
Confidence 899999999999999999999997 999999999999 99999999999888999999998
Q ss_pred HHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 554 LADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 554 ~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++||++||++||+|||+|+.+++++|++.|++ ++.++|+|+.+|++.||.+.|||||+.||+++|++
T Consensus 397 -----~~a~Al~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~ 465 (484)
T cd03342 397 -----AFADALLVIPKTLAENSGLDVQETLVKLQDEYAE-GGQVGGVDLDTGEPMDPESEGIWDNYSVKRQILHS 465 (484)
T ss_pred -----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-cCCceeeeCCCCcccchhhcCcEEcHHHHHHHHHH
Confidence 5777888899999999999999999999999977 56789999999999999999999999999999974
No 62
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.6e-34 Score=320.86 Aligned_cols=371 Identities=18% Similarity=0.221 Sum_probs=253.9
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh----c-c-c----c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL----K-M-H----K 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~----~-~-~----~ 272 (629)
..||+++|+.+.++.|++++|||||+|+.++++||++|..|++.+ .+ . + + .
T Consensus 63 ~~hP~akll~~~a~~qd~~~GDGTTt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~ 142 (536)
T TIGR02340 63 VEHPAAKILVELAQLQDREVGDGTTSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGRE 142 (536)
T ss_pred ccChHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHH
Confidence 469999999999999999999999999999999999999999871 00 0 0 0 0
Q ss_pred ccCccccccccccCCCHHHHHHHHHhCcEEEeccc----------hhhHHHHHHHhCCcccccc--cc--cCcCC--Ccc
Q psy14945 273 FAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK----------RRNMERLSLACGGTAMNSV--EG--LEPAH--LGY 336 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~----------~~dl~rIak~tGg~i~~s~--~~--l~~~~--lG~ 336 (629)
.+..++.+++++|.++. ..++|++..+.++..+. ..+++++.+..|+++.++. +. ++... .+.
T Consensus 143 ~l~~va~tsl~sK~~~~-~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s~~i~Gi~i~~~~~~~~m 221 (536)
T TIGR02340 143 ALINVAKTSMSSKIIGL-DSDFFSNIVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARESYLVKGYALNCTRASQQM 221 (536)
T ss_pred HHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHhcccccCccccchHHeEEEEecCCCccccEEEEEEEEecccCCCCC
Confidence 01112224555554432 23455555555444431 1246677778999986663 21 22211 122
Q ss_pred cceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHH
Q psy14945 337 AGSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAW 409 (629)
Q Consensus 337 ~~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~ 409 (629)
.. .+.+.+++++. |+ .....++.+.++.++ ..+.-...+.+.+..+..... +.|+...|..+++++
T Consensus 222 ~~-----~~~n~kIli~~-~~L~~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~-~lvi~~k~I~~~a~~ 294 (536)
T TIGR02340 222 PK-----RIKKAKIACLD-FNLQKQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGA-NVVLTTGGIDDMCLK 294 (536)
T ss_pred cc-----eecCCcEEEEe-cCCCCCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCC-CEEEeCCCCcHHHHH
Confidence 22 34578887775 33 124577777766643 222222444444444433322 457788888888886
Q ss_pred HHHHhhhh-hcCcchHHHHHHHHHHHhhhhHH-HH----------HhcCCChHHHHHHHHH---hhc-CCCC---ceEEE
Q psy14945 410 HALQNYKN-TVKGKSRLGIQAYAEALLIIPKT-IA----------VNSGFDAQDTLVKLQE---ACG-EAPG---VAVGV 470 (629)
Q Consensus 410 ~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-L~----------~NaG~d~~~vl~~L~~---~~~-~~~~---~~~Gi 470 (629)
||.+++. .+....+..++++|++....+-. +. ...|+........+.. -+. +.+. .++-+
T Consensus 295 -~L~k~~I~~i~rv~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~~~~TIli 373 (536)
T TIGR02340 295 -YFVEAGAMGVRRCKKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGRKSASIIL 373 (536)
T ss_pred -HHHHCCcEEEecCCHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCCCEEEEEE
Confidence 8877664 44555688999999886654311 10 0022211100000000 000 0011 13446
Q ss_pred EeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhh
Q psy14945 471 DVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKV 550 (629)
Q Consensus 471 d~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~ 550 (629)
++.|...+|+.++.+.|++++.+++++ ++++|||||++| ++++..|++++.+.+++++++++
T Consensus 374 rG~t~~~l~E~~r~i~DAl~~~~~~~~-------~~~vVpGGGa~e-~~ls~~l~~~~~~~~~~~~~~~~---------- 435 (536)
T TIGR02340 374 RGANDFMLDEMERSLHDALCVVKRTLE-------SNSVVPGGGAVE-TALSIYLENFATTLGSREQLAIA---------- 435 (536)
T ss_pred eCCcHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEECCCHHH-HHHHHHHHHHhhhCCChhHHHHH----------
Confidence 778899999999999999999999997 999999999999 99999999998888899999998
Q ss_pred HHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCC--------CceeeEecCCCcccccccCCccccHHHH
Q psy14945 551 ERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAP--------GVAVGVDVNSGEVLNPTSAGIYDNLTVK 622 (629)
Q Consensus 551 ~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~--------~~~~Gvd~~~g~i~d~~~~gI~dp~~vK 622 (629)
+|++||+.||++||+|||+|+.+++.+|++.|.. + ..++|+|+.+|++.||.+.|||||+.||
T Consensus 436 --------~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~-~~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~Dp~~~k 506 (536)
T TIGR02340 436 --------EFAEALLIIPKVLAVNAALDSTELVAKLRAYHAA-AQLKPEKKHLKWYGLDLSNGKIRDNKEAGVLEPAVSK 506 (536)
T ss_pred --------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-cCcccccccCceEeEEccCCccccchhccceecHHHH
Confidence 4777788899999999999999999999999976 3 3479999999999999999999999999
Q ss_pred HHHhhc
Q psy14945 623 RQIINS 628 (629)
Q Consensus 623 ~~~i~~ 628 (629)
.|+|++
T Consensus 507 ~~~l~~ 512 (536)
T TIGR02340 507 VKSLKF 512 (536)
T ss_pred HHHHHH
Confidence 999974
No 63
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.3e-34 Score=320.84 Aligned_cols=375 Identities=17% Similarity=0.174 Sum_probs=248.2
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~----~~~ 273 (629)
..||+++|+++.++.|++++|||||+++.++++||++|..|++.+ .+ .. ++.
T Consensus 59 ~~hp~a~ll~~~a~~q~~~~GDGTtt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~ 138 (515)
T cd03338 59 VLHPAAKMLVELSKAQDIEAGDGTTSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRES 138 (515)
T ss_pred CcCHHHHHHHHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHH
Confidence 469999999999999999999999999999999999999999761 00 00 001
Q ss_pred cCccccccccccCCC---HHHHHHHHHhCcEEEecc--c--hhhHHHHHHHhCCccccccc----ccCcCCCcccceEEE
Q psy14945 274 APDCSTSDRYRTGID---PQSLDLFAREGIIALRRA--K--RRNMERLSLACGGTAMNSVE----GLEPAHLGYAGSVFE 342 (629)
Q Consensus 274 l~v~~~~~l~~k~i~---~~~~~~la~~~I~vv~~v--~--~~dl~rIak~tGg~i~~s~~----~l~~~~lG~~~~v~e 342 (629)
+..++.+++++|.++ +...++++++...+-+.- . ..+..++.+..|+++.+|.. .++......-.. .
T Consensus 139 l~~va~ts~~sK~~~~~~~~ls~li~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds~lv~Giv~~k~~~~~~~~--p 216 (515)
T cd03338 139 LIKSATTSLNSKVVSQYSSLLAPIAVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDTELVDGLVFTQKASKKAGG--P 216 (515)
T ss_pred HHHHHHHHhccccchhhHHHHHHHHHHHHHHhhcccccCcCCHHHeEEEEecCCChhhceeeeeEEEeccccCcCCC--C
Confidence 111223455555442 223344443333332211 0 12455677888999888831 123222111000 1
Q ss_pred EEEcCeeEEEEeecC----C-CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCCh-----HHHHHHH
Q psy14945 343 HVLGEEKFTFVEECK----N-PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGA-----FEVAAWH 410 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~----~-~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~-----~El~l~~ 410 (629)
..+.+.++.++. |+ . ....++++..+.+. .++..++.+...+..+.... -+.|+...+. .+++++
T Consensus 217 ~~i~n~ki~ll~-~~le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g-~~lvi~~~~i~~~~v~~l~~~- 293 (515)
T cd03338 217 TRIEKAKIGLIQ-FCLSPPKTDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSG-CNVLLIQKSILRDAVSDLALH- 293 (515)
T ss_pred ccccCCcEEEEe-ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCCcccccccHHHHH-
Confidence 123466777664 22 1 13456677555422 22222345555444443322 2445665554 567664
Q ss_pred HHHhhhh-hcCcchHHHHHHHHHHHhhhhHH-----HHHhcCCChHHHHHHHHHh---hc-CC-C---CceEEEEeccCC
Q psy14945 411 ALQNYKN-TVKGKSRLGIQAYAEALLIIPKT-----IAVNSGFDAQDTLVKLQEA---CG-EA-P---GVAVGVDVNSGE 476 (629)
Q Consensus 411 ~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-----L~~NaG~d~~~vl~~L~~~---~~-~~-~---~~~~Gid~~t~~ 476 (629)
||.+++. .+....+..++++|++....+-. -....|......+.+.-.. +. +. . ..++-+++.|..
T Consensus 294 ~l~~~~I~av~~~~~~~LerIa~~tGa~ii~sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~~~~~~TIllrG~t~~ 373 (515)
T cd03338 294 FLAKLKIMVVKDIEREEIEFICKTIGCKPVASIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKNPGKTVTILVRGSNKL 373 (515)
T ss_pred HHHHCCceEEecCCHHHHHHHHHHHCCEEecccccCCHhhCCCCceEEEEEECCeEEEEEEecCCCCceEEEEEeCCcHH
Confidence 7877654 45556788899999886553311 0111222100000000000 00 00 1 123445777889
Q ss_pred CCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHh
Q psy14945 477 VLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELAD 556 (629)
Q Consensus 477 i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 556 (629)
.+++.++.+.|++++.+++++ ++++|||||++| ++++..|++++...++++|++++
T Consensus 374 ~l~e~~r~i~Dal~~~~~~~~-------~~~vvpGGG~~e-~~ls~~l~~~~~~~~~~~~~~~~---------------- 429 (515)
T cd03338 374 VLDEAERSLHDALCVIRCLVK-------KRALIPGGGAPE-IEIALQLSEWARTLTGVEQYCVR---------------- 429 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-------CCCEEECCCHHH-HHHHHHHHHHhccCCcHHHHHHH----------------
Confidence 999999999999999999997 999999999999 99999999998888899999998
Q ss_pred hhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 557 LLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 557 ~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++||+.||++||+|||+|+.+++++|++.|++ ++.++|+|+.+|.+.||.+.|||||+.||+++|++
T Consensus 430 --~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~ 498 (515)
T cd03338 430 --AFADALEVIPYTLAENAGLNPISIVTELRNRHAQ-GEKNAGINVRKGAITNILEENVVQPLLVSTSAITL 498 (515)
T ss_pred --HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc-cCCccceeccCCCccchhhcCceecHHHHHHHHHH
Confidence 5777888899999999999999999999999976 56789999999999999999999999999999974
No 64
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2e-33 Score=311.74 Aligned_cols=338 Identities=18% Similarity=0.236 Sum_probs=231.2
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc-----------------------c---c--c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM-----------------------H---K--F 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~-----------------------~---~--~ 273 (629)
..||+++|+++..+.|++++|||||+++.++++||++|..|++.+ ..| . . .
T Consensus 59 ~~hP~a~ll~~~a~~~~~~~GDGTTt~vvL~~~Ll~~~~~li~~g-i~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~ 137 (472)
T cd03341 59 VQHPAAKLLVMASQMQEEEIGDGTNLVVVLAGELLEKAEELLRMG-LHPSEIIEGYEKALKKALEILEELVVYKIEDLRN 137 (472)
T ss_pred ccCHHHHHHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHhhccccCCccC
Confidence 469999999999999999999999999999999999999999871 100 0 0 0
Q ss_pred ---cCccccccccccCCCHHHHHHHHHhCcEEEeccc-----hh--hHHHHHHHhCCccccccc----ccCcCCCcccce
Q psy14945 274 ---APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK-----RR--NMERLSLACGGTAMNSVE----GLEPAHLGYAGS 339 (629)
Q Consensus 274 ---l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~-----~~--dl~rIak~tGg~i~~s~~----~l~~~~lG~~~~ 339 (629)
+..++.+++++|..+ ..++|++..+.++..+. .. +..+|.+..|+++.+|.. .++....+..
T Consensus 138 ~~~l~~i~~t~l~sk~~~--~~~~l~~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds~lv~Giv~~~~~~~~~-- 213 (472)
T cd03341 138 KEEVSKALKTAIASKQYG--NEDFLSPLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDSKVVRGMVFKREPEGSV-- 213 (472)
T ss_pred HHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccceEEeeEEEccccCCCc--
Confidence 000111233444332 13344444444443332 11 345666777887777731 1222111111
Q ss_pred EEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh-h
Q psy14945 340 VFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN-T 418 (629)
Q Consensus 340 v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~-~ 418 (629)
..+.+.++.++. ++-.. .-+.++..++..+.+++ +|.+.+. .
T Consensus 214 ---~~~~n~~Ili~~-~~Le~--------------------------------g~~lvi~~~~I~d~al~-~l~~~~I~a 256 (472)
T cd03341 214 ---KRVKKAKVAVFS-CPFDI--------------------------------GVNVIVAGGSVGDLALH-YCNKYGIMV 256 (472)
T ss_pred ---eeccCCcEEEEe-ccccC--------------------------------CCeEEEECCCCCHHHHH-HHHHCCeEE
Confidence 224456665554 22111 11446777788888885 7877653 3
Q ss_pred cCcchHHHHHHHHHHHhhhhHH-----HHHhcCCChHHHHHHHHH---hhc-CCC--C--ceEEEEeccCCCCCCCcccc
Q psy14945 419 VKGKSRLGIQAYAEALLIIPKT-----IAVNSGFDAQDTLVKLQE---ACG-EAP--G--VAVGVDVNSGEVLNPTSAGI 485 (629)
Q Consensus 419 i~~~~k~~i~~fa~ALe~ip~~-----L~~NaG~d~~~vl~~L~~---~~~-~~~--~--~~~Gid~~t~~i~d~~e~~I 485 (629)
+....+..++++|++....+-. -.+..|........++-. -+. +.+ . .++-+++.|...+++.++.+
T Consensus 257 v~~~~~~~Le~Ia~~tGa~ii~~~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i 336 (472)
T cd03341 257 IKINSKFELRRLCRTVGATPLPRLGAPTPEEIGYCDSVYVEEIGDTKVVVFRQNKEDSKIATIVLRGATQNILDDVERAI 336 (472)
T ss_pred EEeCCHHHHHHHHHHhCCEEecccccCCHhHCCCceEEEEEEECCeeEEEEEccCCCCCeEEEEEECCCHHHHHHHHHHH
Confidence 4445677888888875543311 011223211000000000 000 001 1 23445777889999999999
Q ss_pred cchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchh
Q psy14945 486 YDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVP 565 (629)
Q Consensus 486 ~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~ 565 (629)
.|++++.+++++ ++++|||||++| ++++..|++++....++++++++ +|++||+
T Consensus 337 ~DAl~~~~~ai~-------~~~vVpGGG~~e-~~ls~~l~~~~~~~~~~~~~~~~------------------~~a~al~ 390 (472)
T cd03341 337 DDGVNVFKSLTK-------DGRFVPGAGATE-IELAKKLKEYGEKTPGLEQYAIK------------------KFAEAFE 390 (472)
T ss_pred HHHHHHHHHHhc-------CCCEEeCcCHHH-HHHHHHHHHHhhccCCHHHHHHH------------------HHHHHHH
Confidence 999999999997 999999999999 99999999998888889999988 4777788
Q ss_pred HHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCC--cccccccCCccccHHHHHHHhhc
Q psy14945 566 SLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSG--EVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 566 ~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g--~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+||++||+|||+|+.+++.+|+..|.+ ++.++|+|+.+| ++.||.+.|||||+.||+++|++
T Consensus 391 ~ip~~L~~NaG~d~~~~~~~l~~~h~~-~~~~~Gid~~~g~~~~~d~~~~gI~dp~~vk~~~l~~ 454 (472)
T cd03341 391 VVPRTLAENAGLDATEVLSELYAAHQK-GNKSAGVDIESGDEGTKDAKEAGIFDHLATKKWAIKL 454 (472)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHc-cCCeeeeeccCCCCCccChhhccceecHHHHHHHHHH
Confidence 899999999999999999999999976 567899999999 99999999999999999999974
No 65
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.98 E-value=1.7e-31 Score=273.92 Aligned_cols=230 Identities=21% Similarity=0.216 Sum_probs=198.0
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCcccccccc-ceeEEEecCCCccceEEEEeEEEeccCCCCCCcccccCeeEEEeec
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHIL-TCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNI 196 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~-~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~n~kIll~~~ 196 (629)
.+.|+.++|+|+..-.-.. . .....++. +++|++++||++.||++++|++|+++..++.||++++||||++++|
T Consensus 20 ~~~ls~l~v~Av~~v~~~~----~-~~~~~di~~~I~I~ki~Ggs~~dS~li~Gvvi~k~~~~~~m~~~i~n~kIlll~~ 94 (261)
T cd03334 20 LDILLPLVWKAASNVKPDV----R-AGDDMDIRQYVKIKKIPGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQG 94 (261)
T ss_pred HHHHHHHHHHHHHHhhccc----c-cCCccChhHceEEEEecCCCHHHcEEEeeEEEeCCCCCccCCcccCCCcEEEEee
Confidence 5778888888887521000 0 00123444 4999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCc
Q psy14945 197 SMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPD 276 (629)
Q Consensus 197 ~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v 276 (629)
+|++++++.+ ...+..++.+|.+++.+. +..|. ..++ .+
T Consensus 95 ~Le~~~~~~~----------------~~~~~~~~~~E~~~l~~~--------v~kI~-------------~~g~----nv 133 (261)
T cd03334 95 PLEYQRVENK----------------LLSLDPVILQEKEYLKNL--------VSRIV-------------ALRP----DV 133 (261)
T ss_pred eeccccccCC----------------HHHHHHHHHHHHHHHHHH--------HHHHH-------------hcCC----CE
Confidence 9999887633 246788999999999999 88887 4454 22
Q ss_pred cccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccc-cccCcCCCcccceEEEEEEcC-----eeE
Q psy14945 277 CSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSV-EGLEPAHLGYAGSVFEHVLGE-----EKF 350 (629)
Q Consensus 277 ~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~-~~l~~~~lG~~~~v~e~~i~~-----~~~ 350 (629)
++++++|++.+++||.+++|++++++++++++|||++|||++++++ ..++++.+|+|+.+++.++++ .++
T Consensus 134 ----Il~~k~I~~~a~~~l~k~gI~~v~~v~~~dl~rIa~~tGa~ii~~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~ 209 (261)
T cd03334 134 ----ILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERISRCTGADIISSMDDLLTSPKLGTCESFRVRTYVEEHGRSKTL 209 (261)
T ss_pred ----EEECCccCHHHHHHHHHCCCEEEEecCHHHHHHHHHHhCCEEecChhhhcCcccCcCcceEEEEEecCcCCCceeE
Confidence 5689999999999999999999999999999999999999999995 478889999999999999986 699
Q ss_pred EEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCc
Q psy14945 351 TFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAV 397 (629)
Q Consensus 351 ~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~V 397 (629)
++|++|+.+..+||+|||+++..++|++|+++||+++++++..+..+
T Consensus 210 ~~~~~~~~~~~~TIlLRG~t~~~lde~eR~i~Dal~v~~~~~le~~~ 256 (261)
T cd03334 210 MFFEGCPKELGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLETSF 256 (261)
T ss_pred EEEecCCCCceeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999998899999999999999999999999999999998877643
No 66
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=2.5e-32 Score=303.02 Aligned_cols=369 Identities=20% Similarity=0.222 Sum_probs=256.3
Q ss_pred cccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----cccccC---c
Q psy14945 223 QHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----MHKFAP---D 276 (629)
Q Consensus 223 ~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~~~~l~---v 276 (629)
+||.++|+++-++.|++++||||||++.++++||++|+.+|+.+ .++ +-.... .
T Consensus 63 ehp~akll~eva~~qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~~ 142 (524)
T COG0459 63 EHPGAKLLVEVAKKQDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEELK 142 (524)
T ss_pred cCchhHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhh
Confidence 79999999999999999999999999999999999999999771 000 000000 1
Q ss_pred cccccccccCCCHHHHHHHHHhCcEEEeccchh----hHHHHHHHhCCccccccc----ccCc---CCCcccceEEEEEE
Q psy14945 277 CSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR----NMERLSLACGGTAMNSVE----GLEP---AHLGYAGSVFEHVL 345 (629)
Q Consensus 277 ~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~----dl~rIak~tGg~i~~s~~----~l~~---~~lG~~~~v~e~~i 345 (629)
++.+.++++..+.. +++.+..+.++..+... +.+++.+..|+...++.. .++. .++.... ..+
T Consensus 143 ~~~t~v~sk~~~~~--~~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~~vveG~~~dkg~~s~~~~~~----~~~ 216 (524)
T COG0459 143 IAITSVASKSANSD--EEIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETELEVVEGMVFDKGYLSPYFMPD----KRL 216 (524)
T ss_pred hhhheeeeeeccCh--HHHHHHHHHHHHHhcccccccCCeEEEEecCCCccceEEEeeEEecCCccCCCCCCc----ccc
Confidence 12345566666433 77777777888777653 788888899998887742 1333 2223331 234
Q ss_pred cCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHH-HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh
Q psy14945 346 GEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTK-DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN 417 (629)
Q Consensus 346 ~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~-r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~ 417 (629)
.+.++.+++ |+ ......+.+..+++. +.++.+ ..+...........-+-.+|...|..+++.+ ||.+.+.
T Consensus 217 e~~~Ili~d-~~l~~~k~~l~~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~-~L~d~~I 294 (524)
T COG0459 217 ENPKILLLD-KKLEIKKPELPLEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKA-YLEDIAI 294 (524)
T ss_pred ccceEEEEc-cccccccccCcceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHH-HHHhhcc
Confidence 578888876 33 113378888888855 455555 5555554333333333357888899999996 8888764
Q ss_pred -hcCcchHHHH-HHHHHHHhhhhHH-HH----HhcCC----------ChHHHHHHHHHhhc-CCCCceEEEEeccCCCCC
Q psy14945 418 -TVKGKSRLGI-QAYAEALLIIPKT-IA----VNSGF----------DAQDTLVKLQEACG-EAPGVAVGVDVNSGEVLN 479 (629)
Q Consensus 418 -~i~~~~k~~i-~~fa~ALe~ip~~-L~----~NaG~----------d~~~vl~~L~~~~~-~~~~~~~Gid~~t~~i~d 479 (629)
......+.++ ..++++...-+-. +- .-.|. .+-+-.+.+..... ..+..++-+++.|...+|
T Consensus 295 lt~~~v~~~dl~~~l~~~~ga~~v~~~~d~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~tI~vrgate~~ld 374 (524)
T COG0459 295 LTGRRVKKEDLGERLAKLGGAKIVSVLKDLTTIVLGEGAAGLVEETKTGDYDMEKLQERKAKAGGVATILVRGATEVELD 374 (524)
T ss_pred eecceecchhhHHHHHHccCceEEeecccCceeecCccccceEEEeeccchhhhhhhhhhhcCCCeEEEEECCccHhHHH
Confidence 2222233344 4555443322100 00 11121 01111122221111 001234456778999999
Q ss_pred CCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCC-hHHHHHHHHHHHhhhhhHHHHHhhh
Q psy14945 480 PTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPP-SREILLDVARTSLRTKVERELADLL 558 (629)
Q Consensus 480 ~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~~~l 558 (629)
+.++.|.|++++.++++. ++++|||||+.| ++++..|++++.+.++ ++|++++
T Consensus 375 E~er~i~DAL~~~~~ave-------~g~iV~GGGa~e-~~~a~~L~~~~~~~~g~~e~~~i~------------------ 428 (524)
T COG0459 375 EKERRIEDALNVVRAAVE-------EGKIVPGGGAAE-IEAALRLREYAMTVEGGDEQLGIE------------------ 428 (524)
T ss_pred HHHHHHHHHHHHHHHHHh-------cCCeEeCCCHHH-HHHHHHHHhhhccCCchHHHHHHH------------------
Confidence 999999999999999997 889999999999 9999999998555555 8999999
Q ss_pred ccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcc-cccccCCccccHHHHHHHhhc
Q psy14945 559 AEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEV-LNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 559 ~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i-~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||.||++||+|||+|+.+++++||+.|. ..++|+|+.+|++ .||.+.|||||+.||+++|+.
T Consensus 429 ~~a~Ale~ip~~La~NaG~d~~~v~~~L~~~~~---~~~~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~ 496 (524)
T COG0459 429 AFARALEAPPRQLAENAGLDPIEVLSKLRSAHA---TTNYGIDAFTGEYEDDMIEAGIIDPLKVKRSALKN 496 (524)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccc---CCccceeccCCccccchHhccCcChHHHHHHHHHH
Confidence 466777889999999999999999999999884 3469999999999 779999999999999999974
No 67
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=99.98 E-value=1e-32 Score=306.23 Aligned_cols=339 Identities=22% Similarity=0.282 Sum_probs=227.8
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc-----------------------------cc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM-----------------------------HK 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~-----------------------------~~ 272 (629)
..||.++++.+..+.|++++|||||+++.++++||+++..|++.+ ..| ++
T Consensus 59 ~~hp~a~ll~~~~~~~~~~~GDGTtt~viL~~~ll~~~~~li~~g-i~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~ 137 (464)
T cd00309 59 VEHPAAKLLVEVAKSQDDEVGDGTTTVVVLAGELLKEAEKLLAAG-IHPTEIIRGYEKAVEKALEILKEIAVPIDVEDRE 137 (464)
T ss_pred CcCHHHHHHHHHHHHHHhHhCCchhHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHH
Confidence 369999999999999999999999999999999999999999761 111 00
Q ss_pred ccCccccccccccCC---CHHHHHHHHHhCcEEEeccc--hhhHHHHHHHhCCccccccc----ccCcCCCcccceEEEE
Q psy14945 273 FAPDCSTSDRYRTGI---DPQSLDLFAREGIIALRRAK--RRNMERLSLACGGTAMNSVE----GLEPAHLGYAGSVFEH 343 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i---~~~~~~~la~~~I~vv~~v~--~~dl~rIak~tGg~i~~s~~----~l~~~~lG~~~~v~e~ 343 (629)
.+..++.+++.+|-. ++...+++.++.-.+-+... .....++.+..|+++.+|.- .++..... .....
T Consensus 138 ~l~~ia~tsl~sK~~~~~~~~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds~li~Gi~~~~~~~~---~~m~~ 214 (464)
T cd00309 138 ELLKVATTSLNSKLVSGGDDFLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDSELVVGMVFDKGYLS---PYMPK 214 (464)
T ss_pred HHHHHhHhcccccccccchHHHHHHHHHHHHHhccccCccccceEEEEecCCCCcccceeeeeEEEecCCCC---CCCce
Confidence 011111233333332 22233333333322211110 02345566666666666531 11111110 00012
Q ss_pred EEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh-hcCcc
Q psy14945 344 VLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN-TVKGK 422 (629)
Q Consensus 344 ~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~-~i~~~ 422 (629)
.+.+.++.++. |+- ++ .|+..+|..+.+++ +|.+++. .+...
T Consensus 215 ~~~n~~Ili~~-~~L------------e~-----------------------lIi~~~~I~~~al~-~L~~~~I~~v~~~ 257 (464)
T cd00309 215 RLENAKILLLD-CKL------------EY-----------------------VVIAEKGIDDEALH-YLAKLGIMAVRRV 257 (464)
T ss_pred eecCceEEEEe-cCc------------ce-----------------------EEecCCCcCHHHHH-HHHHCCeEEEEeC
Confidence 23345554443 221 11 37788889999996 7776653 34445
Q ss_pred hHHHHHHHHHHHhhhhHHH-----HHhcCCChHHHHHHHHH---hhc-C-CCC--ceEEEEeccCCCCCCCcccccchhh
Q psy14945 423 SRLGIQAYAEALLIIPKTI-----AVNSGFDAQDTLVKLQE---ACG-E-APG--VAVGVDVNSGEVLNPTSAGIYDNLT 490 (629)
Q Consensus 423 ~k~~i~~fa~ALe~ip~~L-----~~NaG~d~~~vl~~L~~---~~~-~-~~~--~~~Gid~~t~~i~d~~e~~I~D~~~ 490 (629)
.+..++++|++....+-.- ..+.|........++.. -+. + .+. .++-+++.|...+++.++.++|+++
T Consensus 258 ~~~~L~~Ia~~tGa~ii~~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~TIllrG~t~~~l~e~~r~i~dal~ 337 (464)
T cd00309 258 RKEDLERIAKATGATIVSRLEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKGGKVATILLRGATEVELDEAERSLHDALC 337 (464)
T ss_pred CHHHHHHHHHHhCCEEecccccCCcccCccccEEEEEEEcCeeEEEEEecCCCCEEEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 7888999988865543110 11122211000000000 000 0 011 2344577788999999999999999
Q ss_pred HHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHH
Q psy14945 491 VKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNS 570 (629)
Q Consensus 491 Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~ 570 (629)
+.+++++ +|++|||||++| ++++..|++++...+++++++++ +|++||++||++
T Consensus 338 ~~~~~~~-------~~~~vpGGGa~E-~~ls~~L~~~~~~~~~~~~~~~~------------------~~a~aL~~ip~~ 391 (464)
T cd00309 338 AVRAAVE-------DGGIVPGGGAAE-IELSKALEELAKTLPGKEQLGIE------------------AFADALEVIPRT 391 (464)
T ss_pred HHHHHHH-------cCCcccCCcHHH-HHHHHHHHHHhcccchHHHHHHH------------------HHHHHHHHHHHH
Confidence 9999997 899999999999 99999999999888899999998 477778889999
Q ss_pred hHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 571 ATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 571 La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
||+|||+|+.+++.+|++.|.+ ++.++|+|+.+|++.||.+.|||||+.||+++|+.
T Consensus 392 L~~NaG~d~~~~~~~l~~~~~~-~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~~l~~ 448 (464)
T cd00309 392 LAENAGLDPIEVVTKLRAKHAE-GGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKS 448 (464)
T ss_pred HHHHcCCCHHHHHHHHHHHhhc-cCCCeeEECCCCcEeehhhccCeecHHHHHHHHHH
Confidence 9999999999999999999976 56789999999999999999999999999999974
No 68
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=99.97 E-value=7.3e-31 Score=293.64 Aligned_cols=129 Identities=20% Similarity=0.276 Sum_probs=119.2
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|...+|+.++.+.|++++.+++++ ++ +|||||++| ++++..|++++. .++++|++++
T Consensus 375 TI~irG~t~~~l~E~~r~i~Dal~~~k~a~~-------~g-~VpGGGa~e-~~~s~~L~~~~~-~~~~~~~~~~------ 438 (520)
T cd03344 375 VIKVGGATEVELKEKKDRVEDALNATRAAVE-------EG-IVPGGGVAL-LRASPALDKLKA-LNGDEKLGIE------ 438 (520)
T ss_pred EEEEecCcHHHHHHHHHHHHHHHHHHHHHHh-------cC-CCcCCcHHH-HHHHHHHHHhcc-CChHHHHHHH------
Confidence 4456788999999999999999999999997 75 999999999 999999999987 8899999999
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++++|++.|. ++|+|+.+|+++||.+.|||||+.||.|+|
T Consensus 439 ------------~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~-----~~G~d~~~g~~~d~~~~gV~Dp~~vk~~~l 501 (520)
T cd03344 439 ------------IVRRALEAPLRQIAENAGVDGSVVVEKVLESPD-----GFGYDAATGEYVDMIEAGIIDPTKVVRSAL 501 (520)
T ss_pred ------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcC-----CEeEECCCCcccchHhccCeecHHHHHHHH
Confidence 577788889999999999999999999999872 799999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 502 ~~ 503 (520)
T cd03344 502 QN 503 (520)
T ss_pred HH
Confidence 74
No 69
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=99.96 E-value=8.9e-30 Score=285.75 Aligned_cols=129 Identities=19% Similarity=0.262 Sum_probs=118.9
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|..++|+.++.+.|++++.+++++ ++ +|||||++| ++++..|++++ +.++++|++++
T Consensus 377 TI~irG~t~~~l~E~er~i~DAl~~~~~a~~-------~g-~VpGGGa~e-~~ls~~L~~~~-~~~g~~~~~i~------ 440 (542)
T PRK12849 377 VIKVGAATEVELKERKDRVEDALNATRAAVE-------EG-IVPGGGVAL-LRAAKALDELA-GLNGDQAAGVE------ 440 (542)
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHHHHHHHH-------cC-eecCCCHHH-HHHHHHHHHhh-CCChHHHHHHH------
Confidence 4556788999999999999999999999997 74 999999999 99999999998 88999999999
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++++|++.| .++|+|+.+|++.||.+.|||||+.||.|+|
T Consensus 441 ------------~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~-----~~~G~d~~~g~~~d~~~~GV~Dp~~vk~~al 503 (542)
T PRK12849 441 ------------IVRRALEAPLRQIAENAGLDGSVVVAKVLELE-----DGFGFNAATGEYGDLIAAGIIDPVKVTRSAL 503 (542)
T ss_pred ------------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhC-----CCcceeCCCCccccHHhccCccCHHHHHHHH
Confidence 57778888999999999999999999999876 3699999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 504 ~~ 505 (542)
T PRK12849 504 QN 505 (542)
T ss_pred HH
Confidence 74
No 70
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=99.96 E-value=2.6e-29 Score=282.13 Aligned_cols=354 Identities=14% Similarity=0.177 Sum_probs=219.1
Q ss_pred cccc----HHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHH
Q psy14945 222 IQHP----TASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAR 297 (629)
Q Consensus 222 ~~~~----~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~ 297 (629)
.+|| .++|+++.++.|++++|||||||+.++++||++|+.||++ ...|. .++. .+ +... +.+.++|.+
T Consensus 62 ~~hp~~~~~akll~~~a~~qd~e~GDGTTtvviLa~~LL~~a~~li~~-Gihp~---~I~~--G~-~~a~-~~~~~~L~~ 133 (541)
T PRK12851 62 LEDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGAKAVAA-GANPM---DLKR--GI-DRAV-AAVVEELKA 133 (541)
T ss_pred CCCchhhHHHHHHHHHHHhhhHhhCCCccHHHHHHHHHHHHHHHHHhC-CCCHH---HHHH--HH-HHHH-HHHHHHHHH
Confidence 4688 8899999999999999999999999999999999999976 22220 0000 00 0000 223444444
Q ss_pred hCcEEEeccchhhHHHHHHHhCC--cccccc-----cccCcCCCcccceEEEEEEcCeeEEEEee------cCCC-----
Q psy14945 298 EGIIALRRAKRRNMERLSLACGG--TAMNSV-----EGLEPAHLGYAGSVFEHVLGEEKFTFVEE------CKNP----- 359 (629)
Q Consensus 298 ~~I~vv~~v~~~dl~rIak~tGg--~i~~s~-----~~l~~~~lG~~~~v~e~~i~~~~~~~~~~------~~~~----- 359 (629)
..+.+ -...++..+++.... .....+ ..+-+ -|.+ .+...........++.| +..+
T Consensus 134 ~s~~~---~~~~~l~~va~~s~~~~~~l~~lv~~Av~~vg~--~g~i-~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~ 207 (541)
T PRK12851 134 NARPV---TTNAEIAQVATISANGDAEIGRLVAEAMEKVGN--EGVI-TVEESKTAETELEVVEGMQFDRGYLSPYFVTD 207 (541)
T ss_pred hccCC---CCHHHHHHHHHHhccChHHHHHHHHHHHHHhcc--cCce-EEEEccCCCcceEEEEEEEecCCccccccccC
Confidence 33211 122334444433220 000000 00100 0111 11110000111111111 1111
Q ss_pred --------ccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh-------hcC----
Q psy14945 360 --------QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN-------TVK---- 420 (629)
Q Consensus 360 --------~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~-------~i~---- 420 (629)
..+.|++....-...+++... +..+.... -+.|+..++..+.+++ +|...+. .++
T Consensus 208 ~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~----l~~i~~~~-~~lvi~~~~I~~~al~-~l~~n~i~g~~~i~av~~p~~ 281 (541)
T PRK12851 208 ADKMEAELEDPYILIHEKKISNLQDLLPV----LEAVVQSG-KPLLIIAEDVEGEALA-TLVVNKLRGGLKVAAVKAPGF 281 (541)
T ss_pred CCCCeEEecccEEEEEcCCcCcHHHHHHH----HHHHHHhC-cCEEEECCCCChHHHH-HHHHcCCcCceeEEEEecCcc
Confidence 245666655553334443333 33332222 2567888999999997 5544431 111
Q ss_pred -cchHHHHHHHHHHHhhhhHH------H----HHhcCCC------------------hHH---HHHHHHHhhcC------
Q psy14945 421 -GKSRLGIQAYAEALLIIPKT------I----AVNSGFD------------------AQD---TLVKLQEACGE------ 462 (629)
Q Consensus 421 -~~~k~~i~~fa~ALe~ip~~------L----~~NaG~d------------------~~~---vl~~L~~~~~~------ 462 (629)
...+..++.+|.+....+-. + .+..|.. +.. -+..|+..-.+
T Consensus 282 ~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~ 361 (541)
T PRK12851 282 GDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGRAKKVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYD 361 (541)
T ss_pred ccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCCccEEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHH
Confidence 24577888888876433211 1 1223321 100 00111100000
Q ss_pred -----------CC-CceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhcc
Q psy14945 463 -----------AP-GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKIT 530 (629)
Q Consensus 463 -----------~~-~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~ 530 (629)
.+ ..++-+++.|..++|+.++.+.|++++.+++++ + ++|||||++| ++++..|++++..
T Consensus 362 ~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~a~~~al~-------~-g~VpGGGa~e-~~~s~~L~~~~~~ 432 (541)
T PRK12851 362 REKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDALHATRAAVE-------E-GIVPGGGVAL-LRAVKALDKLETA 432 (541)
T ss_pred HHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH-------c-CcccCchHHH-HHHHHHHHHHhcC
Confidence 00 113446778999999999999999999999997 7 4999999999 9999999999876
Q ss_pred CCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCccccc
Q psy14945 531 TPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNP 610 (629)
Q Consensus 531 ~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~ 610 (629)
++++|++++ +|++||++||++||+|||+|+.+++++|++.| .++|+|+.+|++.||
T Consensus 433 -~~~~~~~~~------------------~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~-----~~~G~d~~~g~~~d~ 488 (541)
T PRK12851 433 -NGDQRTGVE------------------IVRRALEAPVRQIAENAGAEGSVVVGKLREKP-----GGYGFNAATNEYGDL 488 (541)
T ss_pred -CcHHHHHHH------------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC-----CCeeeeCCCCCccch
Confidence 889999999 47777888999999999999999999999887 269999999999999
Q ss_pred ccCCccccHHHHHHHhhc
Q psy14945 611 TSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 611 ~~~gI~dp~~vK~~~i~~ 628 (629)
.+.|||||+.||.++|++
T Consensus 489 ~~~GIiDp~~vk~~al~~ 506 (541)
T PRK12851 489 YAQGVIDPVKVVRTALQN 506 (541)
T ss_pred hhccCEecHHHHHHHHHH
Confidence 999999999999999974
No 71
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=99.96 E-value=8.1e-30 Score=286.95 Aligned_cols=130 Identities=15% Similarity=0.202 Sum_probs=118.6
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|...+|+.++.+.|++++.+++++ + ++|||||++| ++++..|++++.. .+.+|++++
T Consensus 378 tI~irG~t~~~l~E~er~i~DAl~a~~~a~~-------~-g~VpGGGa~e-~~~s~~L~~~~~~-~~~~q~~i~------ 441 (545)
T PRK12852 378 VIRVGGATEVEVKEKKDRVEDALNATRAAVQ-------E-GIVPGGGVAL-LRAKKAVGRINND-NADVQAGIN------ 441 (545)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHHHHHh-------c-CCCcCchHHH-HHHHHHHHHhhcC-CcHHHHHHH------
Confidence 3456778999999999999999999999997 7 5999999999 9999999999876 788999999
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++++|++.| +.++|+|+.+|++.||.+.|||||+.||.|+|
T Consensus 442 ------------~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~----~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al 505 (545)
T PRK12852 442 ------------IVLKALEAPIRQIAENAGVEGSIVVGKILENK----SETFGFDAQTEEYVDMVAKGIIDPAKVVRTAL 505 (545)
T ss_pred ------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc----CCCeeEeCcCCCcccHHhCcCCcChHHHHHHH
Confidence 47777888999999999999999999999988 25799999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 506 ~~ 507 (545)
T PRK12852 506 QD 507 (545)
T ss_pred HH
Confidence 74
No 72
>KOG0364|consensus
Probab=99.96 E-value=7.7e-30 Score=263.91 Aligned_cols=365 Identities=18% Similarity=0.232 Sum_probs=239.0
Q ss_pred eeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc-----cc---c
Q psy14945 220 NQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK-----MH---K 272 (629)
Q Consensus 220 i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~-----~~---~ 272 (629)
+.+.||+++=+.+-+..||+++|||||||+.+++|.|.+|+.+++.. ..+ .+ .
T Consensus 68 i~Vahpaaksmiel~rtqdeevgdgttsvi~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~ 147 (527)
T KOG0364|consen 68 IDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQ 147 (527)
T ss_pred HhhcCcchhhHhhhhhcccccccCCceeeeeehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccH
Confidence 44679999988888999999999999999999999999999998771 000 00 0
Q ss_pred c-cCccccccccccCCCHHHHHHHHHhCcEEEeccc-----hhhHH---HHHHHhCCccccccc--c-cCcCCCcccceE
Q psy14945 273 F-APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK-----RRNME---RLSLACGGTAMNSVE--G-LEPAHLGYAGSV 340 (629)
Q Consensus 273 ~-l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~-----~~dl~---rIak~tGg~i~~s~~--~-l~~~~lG~~~~v 340 (629)
. ++......+..+-+ ....++...-++.+++.+. ..|+. ++-|+.||.+.+|.. . +...++-+.+ .
T Consensus 148 ~km~~vi~~~v~tk~~-~~~~~~~~~lal~avk~V~~~~g~e~dik~y~kveKvpgg~l~~s~vl~Gv~~nkdv~Hpk-m 225 (527)
T KOG0364|consen 148 AKMLRVINSSVGTKFN-SRWSDLICNLALDAVKTVGVENGREIDIKRYAKVEKVPGGLLEDSCVLKGVMINKDVTHPK-M 225 (527)
T ss_pred HHHHhhhhhhhhhhhh-hhhcchhhhHHHHHHHHhhhccCceechhhhccccccCcccccccceecceeeccccCcHH-H
Confidence 0 00000001111111 1111122222233333321 12333 566778999998842 1 1112222221 0
Q ss_pred EEEEEcCeeEEEEeecCC------CccEEEEecCCC-ccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHH
Q psy14945 341 FEHVLGEEKFTFVEECKN------PQSVTILLKGPN-KHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQ 413 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~~------~~~~TIll~g~~-~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~ 413 (629)
...+.+.++.+|+ |+- +...-.+.+-.+ ...++--+..++.+. ..-.+++-..|+.--|..+++.| ||.
T Consensus 226 -rr~IenprivLlD-~~LeykkGeSqtnve~~~eed~~r~Lqieee~v~~mc-~~Ii~v~pDlVitekG~sdla~h-yl~ 301 (527)
T KOG0364|consen 226 -RRAIENPRIVLLD-CPLEYKKGESQTNVEIVKEEDFTRILQIEEEQVQAMC-EVIIAVKPDLVITEKGVSDLAQH-YLL 301 (527)
T ss_pred -HHHhhcCcEEEec-CCccCCCCccccceeeeechhHHHHHHhhHHHHHHHH-HHHHeecccEEEeccchhHHHHH-HHH
Confidence 0124566777776 431 111222222221 122322222333332 22233444456777799999997 554
Q ss_pred hhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC--CC--------------------CceEE-
Q psy14945 414 NYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE--AP--------------------GVAVG- 469 (629)
Q Consensus 414 ~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~--~~--------------------~~~~G- 469 (629)
+-+. .+....+-+..++++| ||...+...++|...+.+ +| ++.|.
T Consensus 302 k~~iT~~rr~rKtDn~ria~a-----------cga~iv~rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~pkaCti 370 (527)
T KOG0364|consen 302 KANITAIRRLRKTDNNRIARA-----------CGARIVNRPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEPKACTI 370 (527)
T ss_pred hcCchhhhhhhccccchhhhh-----------cCceeccChhhCchhccCcccceeeeeccCchhhhhhhhcCCCcceEE
Confidence 4332 2222233344444444 777766667777666554 21 11133
Q ss_pred -EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhh
Q psy14945 470 -VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRT 548 (629)
Q Consensus 470 -id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~ 548 (629)
+++.+.+++|+++|++-|++.|-++.+- +|.++||||++| |.+|..|++.+....+-++|.+.
T Consensus 371 llrg~skdil~e~ernlqda~~varn~ii-------~PklvPGGGAtE-MAvs~~L~qksa~~~GVekwPY~-------- 434 (527)
T KOG0364|consen 371 LLRGPSKDILNEVERNLQDAMGVARNVII-------NPKLVPGGGATE-MAVSHELRQKSALMTGVEKWPYG-------- 434 (527)
T ss_pred EeccCchhHHHHHHHHhhhHHHHHHHhcc-------CCcccCCccHHH-HHHHHHHHHHHhhccchhccchh--------
Confidence 4667889999999999999999999986 999999999999 99999999988889999999998
Q ss_pred hhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 549 KVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 549 ~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+.+.|||+|||+|++|+|.+++.+++.||+.|.. |...||+|..+|.+.||.+.|+|+|+.+|.|.+++
T Consensus 435 ----------Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~-G~~~~gi~g~tg~iVDm~~~~iwep~~vK~Q~~kt 503 (527)
T KOG0364|consen 435 ----------AVAGALEVIPRTLIQNCGANPIRALTALRAKHKE-GQRVWGIDGETGVIVDMVELGIWEPEAVKLQTGKT 503 (527)
T ss_pred ----------hhhcCceeccHHHHhhcCccHHHHHHHHHHHhcC-cceeecccCceeeEeeeeeccccchhhhhhhhhhH
Confidence 5778899999999999999999999999999987 67899999999999999999999999999998864
No 73
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=99.96 E-value=1.9e-29 Score=283.14 Aligned_cols=129 Identities=17% Similarity=0.246 Sum_probs=118.8
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|...+|+.++.+.|++++.+++++ + .+|||||++| ++++..|+++ .+.++++|++++
T Consensus 378 I~irG~t~~~l~E~er~i~Dal~~vk~al~-------~-g~VpGGGa~e-~~~s~~L~~~-~~~~~~~~~~i~------- 440 (542)
T PRK00013 378 IKVGAATEVEMKEKKDRVEDALHATRAAVE-------E-GIVPGGGVAL-LRAAPALEAL-KGLNGDEATGIN------- 440 (542)
T ss_pred EEecCCCHHHHHHHHHHHHHHHHHHHHHHH-------c-CcccCcHHHH-HHHHHHHHHh-cCCChHHHHHHH-------
Confidence 556788999999999999999999999997 7 4999999999 9999999998 678899999999
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++||++||++||+|||+|+.+++++|++.| . .++|+|+.+|++.||.+.|||||+.||+|+|+
T Consensus 441 -----------~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~-~---~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~ 505 (542)
T PRK00013 441 -----------IVLRALEAPLRQIAENAGLEGSVVVEKVKNGK-G---KGYGYNAATGEYVDMIEAGIIDPTKVTRSALQ 505 (542)
T ss_pred -----------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-C---CCEeEeCCCCceeehhhccCeecHHHHHHHHH
Confidence 57778888999999999999999999999988 2 57999999999999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 506 ~ 506 (542)
T PRK00013 506 N 506 (542)
T ss_pred H
Confidence 4
No 74
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=99.96 E-value=2.2e-29 Score=282.97 Aligned_cols=129 Identities=19% Similarity=0.241 Sum_probs=118.1
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|..++|+.++.+.|++++.+++++ + ++|||||++| ++++..|+++ .+.++++|++++
T Consensus 378 tI~irG~t~~~l~E~er~i~DAl~~~k~a~~-------~-g~VpGGGa~e-~~~s~~L~~~-~~~~~~~~~~i~------ 441 (544)
T PRK12850 378 VIRVGGATEVEVKEKKDRVDDALHATRAAVE-------E-GIVPGGGVAL-LRARSALRGL-KGANADETAGID------ 441 (544)
T ss_pred EEEECCCcHHHHHHHHHHHHHHHHHHHHHHh-------c-CCccCCcHHH-HHHHHHHHhc-cCCChHHHHHHH------
Confidence 3456788999999999999999999999997 7 6999999999 9999999998 677889999999
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++++|++.| .++|+|+.+|++.||.+.|||||+.||.|+|
T Consensus 442 ------------~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~-----~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al 504 (544)
T PRK12850 442 ------------IVRRALEEPLRQIATNAGFEGSVVVGKVAELP-----GNFGFNAQTGEYGDMVEAGIIDPAKVTRTAL 504 (544)
T ss_pred ------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC-----CCcceeCCCCcccchhhccCcccHHHHHHHH
Confidence 57777888999999999999999999999876 3699999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 505 ~~ 506 (544)
T PRK12850 505 QD 506 (544)
T ss_pred HH
Confidence 75
No 75
>PTZ00114 Heat shock protein 60; Provisional
Probab=99.96 E-value=7.7e-29 Score=279.41 Aligned_cols=131 Identities=22% Similarity=0.287 Sum_probs=118.4
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhc--cCCChHHHHHHHHHH
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKI--TTPPSREILLDVART 544 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~--~~~~~~~~~~~~~~~ 544 (629)
++-+++.|...+|+.++.++|++++.+++++ ++ +|||||++| ++++..|++++. +.++++|++++
T Consensus 390 tI~i~G~t~~~l~E~~r~i~Dal~~~k~a~~-------~g-vVpGGGa~e-~~~s~~L~~~~~~~~~~~~~~~~i~---- 456 (555)
T PTZ00114 390 VIKVGGASEVEVNEKKDRIEDALNATRAAVE-------EG-IVPGGGVAL-LRASKLLDKLEEDNELTPDQRTGVK---- 456 (555)
T ss_pred EEEecCCCHHHHHHHHHHHHHHHHHHHHHHh-------cC-cccCCcHHH-HHHHHHHHHHhhccCCchHHHHHHH----
Confidence 4556788999999999999999999999985 65 999999999 999999999876 57889999998
Q ss_pred HhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHH
Q psy14945 545 SLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQ 624 (629)
Q Consensus 545 al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~ 624 (629)
+|++||++||++||+|||+|+.+++++|++ + ++.++|+|+.+|++.||.+.|||||+.||.+
T Consensus 457 --------------~~a~AL~~ip~~La~NaG~d~~~v~~~l~~---~-~~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~ 518 (555)
T PTZ00114 457 --------------IVRNALRLPTKQIAENAGVEGAVVVEKILE---K-KDPSFGYDAQTGEYVNMFEAGIIDPTKVVRS 518 (555)
T ss_pred --------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHh---c-CCCCEeEeCCCCcEeeHHhCCCEeCHHHHHH
Confidence 577788889999999999999999999987 2 4568999999999999999999999999999
Q ss_pred Hhhc
Q psy14945 625 IINS 628 (629)
Q Consensus 625 ~i~~ 628 (629)
+|+.
T Consensus 519 al~~ 522 (555)
T PTZ00114 519 ALVD 522 (555)
T ss_pred HHHH
Confidence 9974
No 76
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=99.96 E-value=1.1e-28 Score=276.64 Aligned_cols=128 Identities=20% Similarity=0.261 Sum_probs=116.7
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|..++|+.++.+.|++++.+++++ ++ +|||||++| ++++..|++ +.+.++++|++++
T Consensus 377 I~irG~t~~~l~E~er~i~Dal~~~r~a~~-------~g-~VpGGGa~e-~~~s~~L~~-~~~~~~~~~~~~~------- 439 (524)
T TIGR02348 377 IKVGAATETEMKEKKLRVEDALNATRAAVE-------EG-IVPGGGVAL-LRAAAALEG-LKGDNEDEAIGID------- 439 (524)
T ss_pred EEecCCCHHHHHHHHHHHHHHHHHHHHHHh-------cC-CccCCcHHH-HHHHHHHHH-hccCChHHHHHHH-------
Confidence 556778999999999999999999999997 75 999999999 999999999 7778899999998
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++||++||++||+|||+|+.+++++|++. . + ++|+|+.+|++.||.+.|||||+.||.|+|+
T Consensus 440 -----------~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~--~-~--~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~ 503 (524)
T TIGR02348 440 -----------IVKRALEAPLRQIAENAGKDGAVVAEKVKES--K-G--NFGFNAATGEYEDLVEAGIIDPTKVTRSALQ 503 (524)
T ss_pred -----------HHHHHHHHHHHHHHHhCCCCHHHHHHHHHhc--C-C--CeeEeCcCCcccchhhccCEEcHHHHHHHHH
Confidence 5777888899999999999999999999875 3 3 3999999999999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 504 ~ 504 (524)
T TIGR02348 504 N 504 (524)
T ss_pred H
Confidence 5
No 77
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=99.95 E-value=9.1e-29 Score=276.00 Aligned_cols=360 Identities=21% Similarity=0.234 Sum_probs=251.8
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc--c-ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM--H-KFA 274 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~--~-~~l 274 (629)
..||.++++.+..+.|++++|||||+++.++.+||+++..|++.+ .+ .. . ..+
T Consensus 40 ~~~P~~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l 119 (485)
T PF00118_consen 40 INHPIAKLLVEASKSQDEEVGDGTTSVVLLACELLRNALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESL 119 (485)
T ss_dssp BSSHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHH
T ss_pred hccchhhhHHHhHHHHHhhhccccceeeecccchhhhhhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhh
Confidence 479999999999999999999999999999999999999998661 00 00 0 111
Q ss_pred CccccccccccCCCHHHHHHHHHhCcEEEeccch-h--hHHHHHHHhCCccccccc----ccCcCCCcc--cceEEEEEE
Q psy14945 275 PDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-R--NMERLSLACGGTAMNSVE----GLEPAHLGY--AGSVFEHVL 345 (629)
Q Consensus 275 ~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-~--dl~rIak~tGg~i~~s~~----~l~~~~lG~--~~~v~e~~i 345 (629)
..++.+.+.++ +.....+.|++..+.++..++. . +.+++.++.|+.+.+|.- .++...... .+. +
T Consensus 120 ~~i~~t~l~~k-~~~~~~~~l~~li~~a~~~~~~~~~~~~i~i~~i~g~~~~dS~li~Giv~~~~~~~~~~~~~-----~ 193 (485)
T PF00118_consen 120 LNIAKTSLNSK-ISSSWSDHLSKLIVDAIKSIKSNFDLDNIKIIKIPGGSISDSELINGIVLDKGFSSPNMPKK-----I 193 (485)
T ss_dssp HHHHHHHHTTS-CGGGCHHHHHHHHHHHHHHHTTTHHGGGEEEEEEESSSSGGEEEESEEEESSSBSSTTSBSE-----E
T ss_pred hhhhccccccc-ccccchhhhhhhHHHHHHhhcccccccchhhhhhccccccccccccceeeeccccccccccc-----c
Confidence 11112233333 2222223444444444422211 1 235667777888876531 133332222 232 3
Q ss_pred cCeeEEEEee-cCC--CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh-hc
Q psy14945 346 GEEKFTFVEE-CKN--PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN-TV 419 (629)
Q Consensus 346 ~~~~~~~~~~-~~~--~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~-~i 419 (629)
.+.+++++.. ... +...++.++.+++. ..++.++.+.+.+..+.... -+.|+..++..+.++. +|.+.+. .+
T Consensus 194 ~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~~i~~~~-~~lIi~~~~i~~~~l~-~l~~~~I~~i 271 (485)
T PF00118_consen 194 ENPKILLLNCPLEYSKSFKSEIRITSPEQLDELSKQEKKYLKKILEKIINLG-VNLIISQKSIDDEALQ-YLNKNGILVI 271 (485)
T ss_dssp ESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHHHHHHHHHHHHHHHHHTTT-SSEEEESSEBTHHHHH-HHHHCTHEEE
T ss_pred ccceEEeeecccccccccccccchhhHHHHHHHHhhhhhhhccccceEeeec-cceeeeecccccccch-hhhhhhhhcc
Confidence 4778888862 111 14688888888754 33344455666665554333 3457888888888885 7877664 44
Q ss_pred CcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-----------C------------CC--ceEEEEecc
Q psy14945 420 KGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-----------A------------PG--VAVGVDVNS 474 (629)
Q Consensus 420 ~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-----------~------------~~--~~~Gid~~t 474 (629)
....+..+++++++....| +..+.++.....+ . .. .++-+.+.+
T Consensus 272 ~~v~~~~l~~i~~~tg~~i-----------i~~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~~~~~~Till~g~t 340 (485)
T PF00118_consen 272 RRVSKEDLERIARATGASI-----------ISSLDDLSDEDLGFCKSVEEREIGNKKYIFIEGIGCLSSKICTILLRGPT 340 (485)
T ss_dssp SSEHHHHHHHHHHHHTSBE-----------BSSCGGSTGGGSEEEEEEEEEEETSSEEEEEEEHSESSSSEEEEEEEESS
T ss_pred ccchHHHHHhhhcccCCcE-----------ecccccccchhhhhhhhhhhcccccccccccccccccccCceEEEecccc
Confidence 5567888888888855443 2222222111111 0 01 123346667
Q ss_pred CCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHH
Q psy14945 475 GEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVEREL 554 (629)
Q Consensus 475 ~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 554 (629)
...+++.++.++|++++.+.+++ ++++|||||++| ++++..|++++...++.++++++
T Consensus 341 ~~~l~e~~~~i~dal~~~~~~~~-------~~~vvpGGG~~e-~~l~~~L~~~~~~~~~~~~~~~~-------------- 398 (485)
T PF00118_consen 341 EFELEERERSIHDALKVLRSALK-------DGGVVPGGGATE-LHLSKALRKYAKSLSGKEQLAIE-------------- 398 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-------SSEEEETTTHHH-HHHHHHHHHHHHCSSSHHHHHHH--------------
T ss_pred chhHHHHHHHHHHHHHHHHHhcc-------CCceeecCcchh-hhhhhhHHHhhhcccCchhhhHH--------------
Confidence 78899999999999999999998 999999999999 99999999999999999999988
Q ss_pred HhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 555 ADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 555 ~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++||+.||++|++|||+|+.+++++|+..|++ +.++|+|+.+|++.||.+.|||||+.+|+++++.
T Consensus 399 ----~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~h~~--~~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l~~ 466 (485)
T PF00118_consen 399 ----AFADALESIPKTLAQNAGLDSSEVISKLKSFHNN--GNNYGIDLDTGEIVDMKEAGILDPLLVKISALKS 466 (485)
T ss_dssp ----HHHHHTTHHHHHHHHHTTSTHHHHHHHHHHHHHS--TTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHH
T ss_pred ----HHHHHHHHhhhhhhhccCCCceeeehhhHhhhcc--ccccCcCccCCceeccccccchhhHHHHHHHHHH
Confidence 4667778899999999999999999999999965 4599999999999999999999999999999974
No 78
>PRK14104 chaperonin GroEL; Provisional
Probab=99.95 E-value=3.3e-28 Score=273.30 Aligned_cols=349 Identities=17% Similarity=0.179 Sum_probs=214.9
Q ss_pred cccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCC---HHHHHHHHHhC
Q psy14945 223 QHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGID---PQSLDLFAREG 299 (629)
Q Consensus 223 ~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~---~~~~~~la~~~ 299 (629)
.||.++|+++.++.|++++||||||++.++++||++|+.|++. ...|. .+ ..|+. ..+.++|.+..
T Consensus 67 ~~pgakll~e~a~~qd~e~GDGTTTvvvLa~~LL~~a~~li~~-Gi~P~---~I-------~~G~~~A~~~~~~~L~~~a 135 (546)
T PRK14104 67 ENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKSVAA-GMNPM---DL-------KRGIDLAVEAVVADLVKNS 135 (546)
T ss_pred cChHHHHHHHHHHhhcccccCcccHHHHHHHHHHHHHHHHHHC-CCCcc---HH-------HHHHHHHHHHHHHHHHHhc
Confidence 4999999999999999999999999999999999999999976 33330 01 11111 23445555544
Q ss_pred cEEEeccchhhHHHHHHHhCC-c-cccc-----ccccCcCCCcccceEEEEEEcC--eeEEEEee------cC------C
Q psy14945 300 IIALRRAKRRNMERLSLACGG-T-AMNS-----VEGLEPAHLGYAGSVFEHVLGE--EKFTFVEE------CK------N 358 (629)
Q Consensus 300 I~vv~~v~~~dl~rIak~tGg-~-i~~s-----~~~l~~~~lG~~~~v~e~~i~~--~~~~~~~~------~~------~ 358 (629)
+.+- ...++..+++..-. . -+.. +..+-+ -|.+. ...... ....+++| +. +
T Consensus 136 ~~v~---~~~~l~~va~~s~~~d~~i~~lv~~Av~~vg~--~g~i~---v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~ 207 (546)
T PRK14104 136 KKVT---SNDEIAQVGTISANGDAEIGKFLADAMKKVGN--EGVIT---VEEAKSLETELDVVEGMQFDRGYISPYFVTN 207 (546)
T ss_pred ccCC---CHHHHHHHHHHHhcCchHHHHHHHHHHHHhcc--CCcee---eEecccccceEEEEEEEEEeCCCCCcchhcC
Confidence 3321 22345555443211 0 0000 001110 02111 000100 11111111 10 1
Q ss_pred C-------ccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHH--h----hhh-hc-----
Q psy14945 359 P-------QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQ--N----YKN-TV----- 419 (629)
Q Consensus 359 ~-------~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~--~----~~~-~i----- 419 (629)
+ ..+-|++....-...+++. ..+..+...- -+.++..+++.+.+++ +|. + ++. .+
T Consensus 208 ~~~~~~~~~~~~Ilv~d~~i~~~~~i~----~~l~~i~~~g-~~lvI~~~~i~~~al~-~l~~Nk~~~~~~i~av~~~~~ 281 (546)
T PRK14104 208 ADKMRVEMDDAYILINEKKLSSLNELL----PLLEAVVQTG-KPLVIVAEDVEGEALA-TLVVNRLRGGLKVAAVKAPGF 281 (546)
T ss_pred cccCceeeeCcEEEEehhhhcCHHHHH----HHHHHHHHhC-cCEEEECCCCcHHHHH-HHHhCcccceeeEEEEeccCC
Confidence 1 1233444432222222322 2222222222 3568899999999997 554 2 111 11
Q ss_pred CcchHHHHHHHHHHHhhhh--H--------HHHHhcCCC------------------hHHHH---HHHHHhhcC------
Q psy14945 420 KGKSRLGIQAYAEALLIIP--K--------TIAVNSGFD------------------AQDTL---VKLQEACGE------ 462 (629)
Q Consensus 420 ~~~~k~~i~~fa~ALe~ip--~--------~L~~NaG~d------------------~~~vl---~~L~~~~~~------ 462 (629)
....+..++.+|.+....+ + .-....|.. +-.+- ..|+..-.+
T Consensus 282 g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~ 361 (546)
T PRK14104 282 GDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYD 361 (546)
T ss_pred CcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCceeEEEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHH
Confidence 2234788888888764322 1 011112320 00000 001000000
Q ss_pred ------------CCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhcc
Q psy14945 463 ------------APGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKIT 530 (629)
Q Consensus 463 ------------~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~ 530 (629)
.+..++-+++.|...+|+.++.|.|++++.+++++ ++ +|||||++| ++++..|+++. .
T Consensus 362 ~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~a~~~ai~-------~g-~VpGGGa~e-~~~s~~L~~~~-~ 431 (546)
T PRK14104 362 REKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVE-------EG-IVPGGGVAL-LRASEQLKGIK-T 431 (546)
T ss_pred HHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH-------cC-cCcCchHHH-HHHHHHHHHhh-c
Confidence 01123446777889999999999999999999997 75 999999999 99999999884 4
Q ss_pred CCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCccccc
Q psy14945 531 TPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNP 610 (629)
Q Consensus 531 ~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~ 610 (629)
.+++++++++ +|++||++||++||+|||+|+.+++++|++.| ..++|+|+.+|++.||
T Consensus 432 ~~~~~~~~i~------------------~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~----~~~~G~d~~~g~~~d~ 489 (546)
T PRK14104 432 KNDDQKTGVE------------------IVRKALSAPARQIAINAGEDGSVIVGKILEKE----QYSYGFDSQTGEYGNL 489 (546)
T ss_pred CChHHHHHHH------------------HHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcC----CCcEeEeCCCCceeeh
Confidence 5788999998 47777888999999999999999999998765 3479999999999999
Q ss_pred ccCCccccHHHHHHHhhc
Q psy14945 611 TSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 611 ~~~gI~dp~~vK~~~i~~ 628 (629)
.+.|||||+.||.|+|++
T Consensus 490 ~~~GI~Dp~~vk~~al~~ 507 (546)
T PRK14104 490 VSKGIIDPTKVVRTAIQN 507 (546)
T ss_pred HhcCCEEcHHHHHHHHHH
Confidence 999999999999999974
No 79
>CHL00093 groEL chaperonin GroEL
Probab=99.95 E-value=1.9e-28 Score=274.89 Aligned_cols=129 Identities=15% Similarity=0.195 Sum_probs=117.6
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhc-cCCChHHHHHHHHHHHh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKI-TTPPSREILLDVARTSL 546 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~-~~~~~~~~~~~~~~~al 546 (629)
+-+++.|...+++.++.+.|++++.+++++ ++ +|||||++| ++++..|++++. ..++++|++++
T Consensus 378 I~irg~t~~~l~E~er~i~DAl~a~r~a~~-------~g-vVpGGGa~e-~~~s~~L~~~~~~~~~g~~~~~i~------ 442 (529)
T CHL00093 378 IKVGAATETEMKDKKLRLEDAINATKAAVE-------EG-IVPGGGATL-VHLSENLKTWAKNNLKEDELIGAL------ 442 (529)
T ss_pred EEeccCcHHHHHHHHHHHHHHHHHHHHHHH-------cC-cccCCcHHH-HHHHHHHHHHhccCCChHHHHHHH------
Confidence 446778899999999999999999999997 74 999999999 999999999986 78899999998
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++++|+.. +.++|+|+.+|+++||.+.|||||+.||.++|
T Consensus 443 ------------~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~-----~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al 505 (529)
T CHL00093 443 ------------IVARAILAPLKRIAENAGKNGSVIIEKVQEQ-----DFEIGYNAANNKFVNMYEAGIIDPAKVTRSAL 505 (529)
T ss_pred ------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHcc-----CCCEeEECCCCcccchHhccCEEcHHHHHHHH
Confidence 5777888899999999999999999999754 24799999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 506 ~~ 507 (529)
T CHL00093 506 QN 507 (529)
T ss_pred HH
Confidence 74
No 80
>KOG0360|consensus
Probab=99.95 E-value=3e-29 Score=261.79 Aligned_cols=355 Identities=20% Similarity=0.222 Sum_probs=249.3
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH----------------hhcc-------------cc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV----------------NLKM-------------HK 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~----------------~~~~-------------~~ 272 (629)
+.||+++++++-.+.|++++|||||+|+..+.|||++|.+|+... .+++ +.
T Consensus 70 V~HPa~KiLvelaq~qd~evgDgttsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~ 149 (545)
T KOG0360|consen 70 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQ 149 (545)
T ss_pred hcchHHHHHHHHHHhccccccCCceEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchH
Confidence 479999999999999999999999999999999999999988660 0011 11
Q ss_pred ccCccccccccccCCCHHHHHHHHHhCcEEEeccchh----------hHHHHHHHhCCcccccccc----cC--cCCCcc
Q psy14945 273 FAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR----------NMERLSLACGGTAMNSVEG----LE--PAHLGY 336 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~----------dl~rIak~tGg~i~~s~~~----l~--~~~lG~ 336 (629)
.+..++.+++++|.|.. ..++|.++.+.++..+... .-..|-+.+|.+..+|+-. ++ ....+.
T Consensus 150 ~Lin~~ktsmsSK~i~~-ds~~f~~~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS~l~~GyaLnc~~asq~m 228 (545)
T KOG0360|consen 150 ILINLAKTSMSSKIIGM-DSDFFTEMVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIESMLLPGYALNCSVASQMM 228 (545)
T ss_pred HHHHHHHhhhcceeccc-chHHHHHHHHHHHHHHhhcccCCceeccccceeEEecCCccchhheeecceeeeccHhhhcc
Confidence 12333346777877743 4567777776666554311 2345677788887777521 11 111122
Q ss_pred cceEEEEEEcCeeEEEEe----ecCCCccEEEEecCCCcc----------CHHHHHHHHHhhHHHHHHHhhCCCcccCCC
Q psy14945 337 AGSVFEHVLGEEKFTFVE----ECKNPQSVTILLKGPNKH----------TLAQTKDAVRDGLRAIKNTIDDGAVVPGAG 402 (629)
Q Consensus 337 ~~~v~e~~i~~~~~~~~~----~~~~~~~~TIll~g~~~~----------~l~e~~r~i~dal~vv~~~~~~~~VV~GGG 402 (629)
. .++.+.|++.|. +.+...+..+++..|.+. ..+.+++.+.+.. +.|+.-||
T Consensus 229 ~-----~~i~~~Kiacld~~Lqk~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ga---------nvVLtt~g 294 (545)
T KOG0360|consen 229 P-----LRIKNAKIACLDFTLQKTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGA---------NVVLTTGG 294 (545)
T ss_pred c-----cccccceeeeEecccccccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCC---------cEEEEcCC
Confidence 2 235578888885 223446778888888744 1222223333332 24667778
Q ss_pred hHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHH------HhhcC--------------
Q psy14945 403 AFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQ------EACGE-------------- 462 (629)
Q Consensus 403 ~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~------~~~~~-------------- 462 (629)
..+|.+ +|+.+.+ +.++.|......+.+++.+|...+..+..|. +.+.+
T Consensus 295 Iddmc~-K~~veag----------amAVrR~~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde 363 (545)
T KOG0360|consen 295 IDDMCL-KYFVEAG----------AMAVRRCKKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDE 363 (545)
T ss_pred ccHHHH-HHHHHcc----------hhhhHHHHHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccce
Confidence 777777 4664432 2333344444445555555554444443221 11111
Q ss_pred ----CCC----ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCCh
Q psy14945 463 ----APG----VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPS 534 (629)
Q Consensus 463 ----~~~----~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~ 534 (629)
.++ ..+-+++.+...+|+++|.++|+++|.+..++ .+.+|||||++| ..++-+|+.|+.+.+..
T Consensus 364 ~ilikg~ka~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLe-------s~~vvpGGG~vE-~aLs~yle~~a~s~~sr 435 (545)
T KOG0360|consen 364 LILIKGTKATSASIILRGANDFMLDEMERSLHDALCVLKRTLE-------SKSVVPGGGAVE-TALSIYLENFATSVGSR 435 (545)
T ss_pred eEEeccCccceeeEEEecCCcccHhhhccchhhHHHHHHHHhc-------cCccccCccHHH-HHHHHHHHhhcccCccH
Confidence 011 12446778899999999999999999999998 999999999999 99999999999999888
Q ss_pred HHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcC-------CCceeeEecCCCcc
Q psy14945 535 REILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEA-------PGVAVGVDVNSGEV 607 (629)
Q Consensus 535 ~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~-------~~~~~Gvd~~~g~i 607 (629)
+|..+- .|+.||.+||++|+-||+.|+.+++++||+.|+.. ..+|+|+|+.+|.+
T Consensus 436 E~laia------------------efa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng~~ 497 (545)
T KOG0360|consen 436 EQLAIA------------------EFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLINGKI 497 (545)
T ss_pred HHHHHH------------------HHHHHHhcchHHHhhhhccccccccccccCCchhhccCCccccchhhCccccccEe
Confidence 887765 47779999999999999999999999999999632 23599999999999
Q ss_pred cccccCCccccHHHHHHHhhc
Q psy14945 608 LNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 608 ~d~~~~gI~dp~~vK~~~i~~ 628 (629)
.|..+.|+++|..+|...++.
T Consensus 498 ~dn~~~g~~ep~~~kvksLk~ 518 (545)
T KOG0360|consen 498 RDNKSAGSFEPPIVKVKSLKF 518 (545)
T ss_pred ecceeeeeeccceeehhhhHH
Confidence 999999999999999888763
No 81
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.94 E-value=4.4e-26 Score=226.96 Aligned_cols=199 Identities=33% Similarity=0.474 Sum_probs=176.2
Q ss_pred hhhcccccc-hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccccc
Q psy14945 109 TCNISMEYE-KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVK 187 (629)
Q Consensus 109 ~~~~s~~~~-~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~ 187 (629)
++.+|+... .+.++.++++|+... +.. . .+.+.++++|++++||++.||++++|++|++++.|++||++++
T Consensus 10 ts~~sk~~~~~~~l~~l~~~Av~~v-~~~------~-~~~~~~~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m~~~~~ 81 (209)
T cd03333 10 TSLNSKLSSWDDFLGKLVVDAVLKV-GPD------N-RMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASPYMPKRLE 81 (209)
T ss_pred HHhccchhhHHHHHHHHHHHHHHHh-hcc------C-CCCchHHEEEEEecCcChhhceeEeeEEEeccccCCCCCeEcC
Confidence 445666533 567888888888753 211 0 0456789999999999999999999999999999999999999
Q ss_pred CeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHh
Q psy14945 188 NAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVN 267 (629)
Q Consensus 188 n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~ 267 (629)
||||++++++|++ .
T Consensus 82 n~~Ill~~~~le~----------------------------------------------------v-------------- 95 (209)
T cd03333 82 NAKILLLDCPLEY----------------------------------------------------V-------------- 95 (209)
T ss_pred CCcEEEEeCCeeE----------------------------------------------------E--------------
Confidence 9999999999952 1
Q ss_pred hccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcC
Q psy14945 268 LKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGE 347 (629)
Q Consensus 268 ~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~ 347 (629)
++++++|++.++++|.+++|.+++++++++++||+++|||+++++++.+++..+|+|+.+++.++++
T Consensus 96 -------------ii~~~~I~~~al~~l~~~~I~~v~~~~~~~l~~ia~~tga~ii~~~~~~~~~~lG~~~~v~~~~~~~ 162 (209)
T cd03333 96 -------------VIAEKGIDDLALHYLAKAGIMAVRRVKKEDLERIARATGATIVSSLEDLTPEDLGTAELVEETKIGE 162 (209)
T ss_pred -------------EEecCcccHHHHHHHHHCCCEEEEeCCHHHHHHHHHHHCCEEecccccCChhhceeeeEEEEEEECC
Confidence 2358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhC
Q psy14945 348 EKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDD 394 (629)
Q Consensus 348 ~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~ 394 (629)
+++++|.+|..+..|||+|||+++..++|++|+++||++++++++++
T Consensus 163 ~~~~~~~~~~~~~~~tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 163 EKLTFIEGCKGGKAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred eEEEEEEcCCCCCEEEEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999998888999999999999999999999999999999988753
No 82
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=99.94 E-value=5.6e-27 Score=265.07 Aligned_cols=128 Identities=16% Similarity=0.199 Sum_probs=114.2
Q ss_pred EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHH-HHHHHHHhhh
Q psy14945 470 VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREIL-LDVARTSLRT 548 (629)
Q Consensus 470 id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~-~~~~~~al~~ 548 (629)
+.+.|...+++.++.|.|++++.+++++ ++ +|||||++| ++++..|++++.+.++.+|+. +++
T Consensus 435 vgG~t~~~l~E~er~i~DAl~avk~ai~-------~g-vVpGGGa~e-l~ls~~L~~~~~~~~~~eq~~g~~~------- 498 (600)
T PLN03167 435 VGAQTETELKEKKLRVEDALNATKAAVE-------EG-IVVGGGCTL-LRLASKVDAIKDTLENDEQKVGADI------- 498 (600)
T ss_pred ecCCcHHHHHHHHHHHHHHHHHHHHHHh-------cC-CCccHHHHH-HHHHHHHHHHHhcCCChhHHHHHHH-------
Confidence 5677889999999999999999999997 77 999999999 999999999988888887765 664
Q ss_pred hhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 549 KVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 549 ~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+++||+++|++||+|||+|+.+++++|++.+ +.++|+|+.+|+++||.+.|||||+.||+++|+.
T Consensus 499 -----------~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~----~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~~ 563 (600)
T PLN03167 499 -----------VKRALSYPLKLIAKNAGVNGSVVSEKVLSND----NPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEH 563 (600)
T ss_pred -----------HHHHHhcchhhhhhcCCCCHHHHHHHHHhcC----CCCEeEeCCCCcCcchHhccCeecHHHHHHHHHH
Confidence 4456777999999999999999999998543 4589999999999999999999999999999974
No 83
>KOG0359|consensus
Probab=99.94 E-value=1.6e-27 Score=246.57 Aligned_cols=359 Identities=26% Similarity=0.294 Sum_probs=269.9
Q ss_pred eccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc--------------------------cccc
Q psy14945 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM--------------------------HKFA 274 (629)
Q Consensus 221 ~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~--------------------------~~~l 274 (629)
+.+||.+-++.....+|++.+|||||++|.+++|+|+||+.++..+ +.| ++.+
T Consensus 67 QiqhPTa~lIakaatAqdd~tGDGttS~VlligEllkqa~~~i~eG-lhprii~~gfe~a~~~~l~~L~k~~~~~~~~~L 145 (520)
T KOG0359|consen 67 QIQHPTASLIAKVATAQDDITGDGTTSVVLLIGELLKQADRYISEG-LHPRIITEGFEAAKNKALEFLEKVSREVDRETL 145 (520)
T ss_pred hhcCchHHHHHHHHHHhhcccCCCcceEEEeeHHHHHHHHHHhhcC-CCcchhhhHHHHHHHHHHhhhhccccchhHHHH
Confidence 4589999999999999999999999999999999999999999882 111 1112
Q ss_pred CccccccccccCCCHHHHHHHHHhCcEEEeccc---h--------------------hhHHHHHHHhCCcccccccccCc
Q psy14945 275 PDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK---R--------------------RNMERLSLACGGTAMNSVEGLEP 331 (629)
Q Consensus 275 ~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~---~--------------------~dl~rIak~tGg~i~~s~~~l~~ 331 (629)
.-++.+++..| ++....+.|....+.++..+. . ..++.+...+|++..++...+++
T Consensus 146 ~~va~tsl~Tk-v~~~la~~lt~~vv~aVl~i~~~~~~idl~mveim~mq~~s~~dT~~v~glvLdhg~rHpdmp~~~e~ 224 (520)
T KOG0359|consen 146 KDVARTSLRTK-VHAELADVLTPIVVDSVLCIRRQEEPIDLFMVEIMEMQHKSLHDTSLVQGLVLDHGARHPDMPRRVED 224 (520)
T ss_pred HHHHHHhhcCc-ccHHHHhHhHHHHHhhheeeccCCCCcchhHHHhhhhccCchhhhHHhhhhhccCCCCCcccccchhc
Confidence 22222344333 444444444444443333221 1 13556777788888888888888
Q ss_pred CCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 332 AHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 332 ~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
.++-.|+...|++..+-+--|| ++.......++..+.++..+.++++++-.-.++ ++||.....++......
T Consensus 225 a~iL~~NvSLEYEK~Einsgff--Ysta~ere~L~~~eR~Fi~~r~~kiielk~~vc------~fvvinqkGidp~sld~ 296 (520)
T KOG0359|consen 225 AYILICNVSLEYEKPEINSGFF--YSTAEEREVLVLAERKFIDQRVRKIIELKRKVC------EFVVINQKGIDPTSLDS 296 (520)
T ss_pred eEEEEeeccccccccccccchh--ccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc------eEEEecccCCCCCcchh
Confidence 8889999888887777666666 444555566666677777777777777666655 36666554443332222
Q ss_pred HHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-CC--------C------------ceEE-
Q psy14945 412 LQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-AP--------G------------VAVG- 469 (629)
Q Consensus 412 L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~~--------~------------~~~G- 469 (629)
+ .+-+|.++.+|-..-...|.-.||...+..+.+|...+.+ +| . ..+.
T Consensus 297 ~----------a~~gIlaLRRAKRRNmERL~lacGG~a~nsvddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p~S~Ti 366 (520)
T KOG0359|consen 297 L----------AKSGILALRRAKRRNMERLVLACGGEAVNSVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNPSSVTI 366 (520)
T ss_pred h----------hhcchHHHHHHhhhhHHHHHHhhccceecccccCChhhccccceeEEeeccceeeEeeecCCCCcceEE
Confidence 2 5678888999988888888888999988888898887765 31 1 0122
Q ss_pred -EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhh
Q psy14945 470 -VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRT 548 (629)
Q Consensus 470 -id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~ 548 (629)
+.+.+..-+--++.++.|.+....+++. +.-.+||+|+.| .++.+.|+....+.++.-+++++
T Consensus 367 Likgpnkht~tQikdairdglrav~ntl~-------d~~~i~Gaga~~-va~~~~lr~~k~~vkgra~~g~~-------- 430 (520)
T KOG0359|consen 367 LIKGPNKHTITQIKDAIRDGLRAVKNTLE-------DKCGIPGAGAFE-VALGRHLRESKKSVKGRAYLGVK-------- 430 (520)
T ss_pred EEeCCccchHHHHHHHHhhHHHHHHHHhh-------hcccccCchHHH-HHHHHHHHHhhhccCchhhhhHH--------
Confidence 2344444444566779999999999997 999999999999 99999999888889999888888
Q ss_pred hhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 549 KVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 549 ~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++||++||++||.|+|+|+.+.+.+|...|.. + ..|+|+.+|+.+|....||||.+.||++.|.+
T Consensus 431 ----------afa~all~ipk~La~nsg~D~qe~l~~l~~e~~~-~--~~g~dl~~g~~~~~~~~gi~Dny~v~~~~l~s 497 (520)
T KOG0359|consen 431 ----------AFANALLVIPKTLAKNSGLDEQETLVSLKKEHEV-T--LRGLDLFRGEECDPSRKGIYDNYSVKKQLLRS 497 (520)
T ss_pred ----------HHHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhh-h--hcccccccCCccchhhccccchHHHHHHHhhh
Confidence 6889999999999999999999999999999966 2 56999999999999999999999999998864
No 84
>KOG0356|consensus
Probab=99.87 E-value=6.5e-23 Score=219.14 Aligned_cols=376 Identities=19% Similarity=0.239 Sum_probs=274.7
Q ss_pred hhhhHHHhcCchhhh----------hhhhccccc-ccccCC----CCCCchhhHHHHhHhhhhcccccc-hhhHHHHHHH
Q psy14945 64 HAQVREERAHPDMQH----------QHGIREEGV-VLNHGA----RHPDMPKSVKNAHILTCNISMEYE-KSDVCIILVK 127 (629)
Q Consensus 64 ~~~~~~e~~~~~~~~----------~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~v~ 127 (629)
.+++|.-...+++-. -++|..++. ....+. -++|+..++...+......|++.+ .++++++|.-
T Consensus 84 aklvq~va~~tN~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAti 163 (550)
T KOG0356|consen 84 AKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATI 163 (550)
T ss_pred cHHHHHHHhhccCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhh
Confidence 566666666666655 333333332 344443 456666677776644444566555 8999999986
Q ss_pred HHhhhcCCCCCCCCCccccccccceeEEEec-CCCccc-eEEEEeEEEeccCCCCCC-------cccccCeeEEEeeccc
Q psy14945 128 GVVLNHGARHPDMPKSVKNAHILTCNISMEY-EKSDVC-IILVKGVVLNHGARHPDM-------PKSVKNAHILTCNISM 198 (629)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~-Ggs~~d-S~li~Gvv~~~~~~~~~m-------~~~i~n~kIll~~~~L 198 (629)
+.. |..++.-.++..+.+++.-+|+.+. |.+..| .++++|+-|+++|.+|++ ..+++||+++|.+..+
T Consensus 164 SAn---gD~~ig~li~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki 240 (550)
T KOG0356|consen 164 SAN---GDKEIGNLISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKI 240 (550)
T ss_pred hcC---CcHHHHHHHHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhh
Confidence 654 4444444566678899999999988 667766 799999999999999975 3568999999999887
Q ss_pred cccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccc
Q psy14945 199 EYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCS 278 (629)
Q Consensus 199 e~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~ 278 (629)
+..+.+.|.|+.+ .....+.++..|.--.+-. ..++ -++.+..+.+|+
T Consensus 241 ----~~v~~ivp~LE~A------~~~~~PLliIAeDi~~eaL---------~tLI-------------lNkLk~glqV~A 288 (550)
T KOG0356|consen 241 ----SSVQSIVPALELA------LAKRRPLLIIAEDIDGEAL---------ATLV-------------LNKLKGGLQVVA 288 (550)
T ss_pred ----hHHHHHhHHHHHh------hhccCceEEEehhcchhHH---------HHHH-------------hhhhccceeEEE
Confidence 4467788888876 2334444555444222222 2222 122233456665
Q ss_pred cccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccc------ccccCcCCCcccceEEEEEEcCeeEEE
Q psy14945 279 TSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNS------VEGLEPAHLGYAGSVFEHVLGEEKFTF 352 (629)
Q Consensus 279 ~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s------~~~l~~~~lG~~~~v~e~~i~~~~~~~ 352 (629)
. --.++.| .++..+.+++-.||+.+... ++..+..++|.|..+. +..+...+
T Consensus 289 v---KapgfGd----------------nrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~~dLG~~~evv---vtkd~t~l 346 (550)
T KOG0356|consen 289 V---KAPGFGD----------------NRKNLLKDIAILTGATVFGEELSTLNLEDAKLEDLGEVGEVV---VTKDDTML 346 (550)
T ss_pred E---ecCCCcc----------------hHHHhhhHHHHHhhhhhhccchhhcccccCchhhcCcceeEE---EecCccee
Confidence 3 1222222 24567999999999999875 2356678889998766 55555555
Q ss_pred EeecCC-----------------------------------CccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCc
Q psy14945 353 VEECKN-----------------------------------PQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAV 397 (629)
Q Consensus 353 ~~~~~~-----------------------------------~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~V 397 (629)
+.+-.+ ...+++-+.|.++.+++|.+.++.||+++++.+++++ +
T Consensus 347 l~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dalnat~aaveeG-i 425 (550)
T KOG0356|consen 347 LKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDALNATRAAVEEG-I 425 (550)
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHHHHHHHHhhcC-c
Confidence 542110 1368999999999999999999999999999999999 8
Q ss_pred ccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCC
Q psy14945 398 VPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEV 477 (629)
Q Consensus 398 V~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i 477 (629)
|||||++.+.++..|.+....-....+.+++++.+||..+..++++|+|.++..++.++... .+|+|..++++
T Consensus 426 vpGGG~all~~~~~l~~lk~~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~~-------~~gyda~~~ey 498 (550)
T KOG0356|consen 426 VPGGGTALLRAIPVLDELKATNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKVLND-------DYGYDAAKGEY 498 (550)
T ss_pred ccCCchHHHHhhhhhhhcccccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHHHhh-------hhhhhhhcccH
Confidence 89999999999999988775223347888999999999999999999999999999998842 46999999999
Q ss_pred CCCCcccccchhhHHHHHhhhhhhcCC
Q psy14945 478 LNPTSAGIYDNLTVKRQIINSWIISGL 504 (629)
Q Consensus 478 ~d~~e~~I~D~~~Vk~~~l~~a~e~a~ 504 (629)
.|+++.||.||..|.+.++..|...|.
T Consensus 499 ~dlv~~GiidP~kVvr~al~~a~~vas 525 (550)
T KOG0356|consen 499 VDLVEAGIIDPTKVVRTALTDAAGVAS 525 (550)
T ss_pred HHHHhccCCChHHHHHHhhhhhhHHHH
Confidence 999999999999999999986665543
No 85
>KOG0357|consensus
Probab=99.86 E-value=7.5e-23 Score=206.38 Aligned_cols=209 Identities=17% Similarity=0.149 Sum_probs=160.3
Q ss_pred HHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhh-hhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHH
Q psy14945 374 LAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYK-NTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDT 452 (629)
Q Consensus 374 l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~-~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~v 452 (629)
.+++.+.++++...+ +++-.|..+-+.| .|.+.. ..+.+.....++.+|-+ +|...+.-
T Consensus 144 f~emi~~vK~~ga~l--------~icqwgfddeanh-ll~~n~lpavrwVGGpEiEliAia-----------T~grIVpr 203 (400)
T KOG0357|consen 144 FEEMIQQIKETGANL--------AICQWGFDDEANH-LLLQNNLPAVRWVGGPEIELIAIA-----------TGGRIVPR 203 (400)
T ss_pred HHHHHHHHHhhCCcE--------EEEecccCchhhh-HHhhcCCCceeecCCcceEEEEee-----------cCCeeecc
Confidence 556666666655322 6777788888776 443332 23333222333332222 44544444
Q ss_pred HHHHHHhhcC-C---------------------C-Cce--EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCe
Q psy14945 453 LVKLQEACGE-A---------------------P-GVA--VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPR 507 (629)
Q Consensus 453 l~~L~~~~~~-~---------------------~-~~~--~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~ 507 (629)
+++|.....+ + + ++. +=+++.+.-++++.+|+++|++||.+|.++ +.+
T Consensus 204 F~eL~~~kLG~aglVrE~sfgttkdkmlviEqc~nskaVTifvRg~Nkmii~EakrslhdalCvirnlir-------d~r 276 (400)
T KOG0357|consen 204 FSELTAEKLGFAGLVREISFGTTKDKMLVIEQCKNSKAVTIFVRGGNKMIIEEAKRSLHDALCVIRNLIR-------DNR 276 (400)
T ss_pred HhhhCHhhccccceEEEEecccccceEEEEEecCCCceEEEEEecCcceeHHHHHHHhhhhHHHHHHHhh-------cCe
Confidence 5555544443 1 1 122 335677888999999999999999999998 999
Q ss_pred EEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHH
Q psy14945 508 VITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQ 587 (629)
Q Consensus 508 iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~ 587 (629)
+|+|||+.| +.++.++.+.+.+++|.+||+++ +|++|||+||..||||+|++|++.++.|+
T Consensus 277 ivYgGGaaE-iscslav~~ead~~~g~eqya~r------------------afa~ale~ipmalaensgl~pi~~ls~~k 337 (400)
T KOG0357|consen 277 VVYGGGAAE-ISCALAVSQEADKIPGIEQYAFR------------------AFADALESIPMALAENSGLDPIETLSDVK 337 (400)
T ss_pred eEecCchHH-hhhhhHhhHhhccCCcHHHHHHH------------------HHHHHHhhcchhhhhccCCCchhhhhHhH
Confidence 999999999 99999999999999999999998 68888889999999999999999999999
Q ss_pred HHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 588 EACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 588 ~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+.+.+.++.++|||+..-.--||++.+|+||+..|+|.|.+
T Consensus 338 a~q~~~~~~~lGidcl~~G~nDMk~~~vie~l~~KkqQi~l 378 (400)
T KOG0357|consen 338 ARQVKEMNPALGIDCLHKGTNDMKEQHVIETLIGKKQQISL 378 (400)
T ss_pred HHHHHhcCcccCcchhccCchhhhhhccHHHhhhhHHHHHH
Confidence 99976567899999988888899999999999999999864
No 86
>KOG0230|consensus
Probab=99.80 E-value=2.9e-19 Score=208.04 Aligned_cols=216 Identities=22% Similarity=0.258 Sum_probs=189.7
Q ss_pred CCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCcccccccc
Q psy14945 137 HPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAK 216 (629)
Q Consensus 137 ~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~ 216 (629)
.++.+.+..|...++++|++|+||+..||+++.||++.++.+|..|+..+++|||+++.++|+|++...+.
T Consensus 349 kp~~~~~~~md~~~YVkvK~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~leyqrisn~l--------- 419 (1598)
T KOG0230|consen 349 KPDTDSGGLMDPGNYVKVKCVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLEYQRISNQL--------- 419 (1598)
T ss_pred CcCcccCCCcCcccceEEEEecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecchhhhhhhccc---------
Confidence 45677777899999999999999999999999999999999999999999999999999999998776543
Q ss_pred ceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHH
Q psy14945 217 GIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFA 296 (629)
Q Consensus 217 ~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la 296 (629)
.....++++|.++++.. |.+|. ..+| .+ ++..+++++.++++|.
T Consensus 420 -------sS~etvlqqE~e~lk~~--------varI~-------------s~~p----~v----llVeksVS~~aqe~L~ 463 (1598)
T KOG0230|consen 420 -------SSIETVLQQEKEYLKKV--------VARIE-------------SLRP----DV----LLVEKSVSRIAQELLL 463 (1598)
T ss_pred -------cchHHHHhhHHHHHHHH--------HHHHH-------------hcCC----Ce----EEEechHHHHHHHHhh
Confidence 24566778888899888 88887 4444 22 4569999999999999
Q ss_pred HhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEc-----CeeEEEEeecCCCccEEEEecCCCc
Q psy14945 297 REGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG-----EEKFTFVEECKNPQSVTILLKGPNK 371 (629)
Q Consensus 297 ~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~-----~~~~~~~~~~~~~~~~TIll~g~~~ 371 (629)
..+|.++-+++...++||+++||+.|+.+++.+....+|+|..++..++. .++++||++|+.+.+|||+|||...
T Consensus 464 ~k~I~lvlnvK~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~lG~TiLLrG~~~ 543 (1598)
T KOG0230|consen 464 DKGISLVLNVKRSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPLGCTILLRGDSL 543 (1598)
T ss_pred ccCeEEEEeccHHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCCCceEEecCCCH
Confidence 99999999999999999999999999999999999999999988865544 4678899999999999999999999
Q ss_pred cCHHHHHHHHHhhHHHHHHHhhCCCc
Q psy14945 372 HTLAQTKDAVRDGLRAIKNTIDDGAV 397 (629)
Q Consensus 372 ~~l~e~~r~i~dal~vv~~~~~~~~V 397 (629)
..+.++++.++.++.++++...+..+
T Consensus 544 ~eLkkVK~Vvq~~v~aay~l~LE~Sf 569 (1598)
T KOG0230|consen 544 EELKKVKHVVQYLVFAAYHLALETSF 569 (1598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999988877655433
No 87
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.11 E-value=4.1e-11 Score=123.41 Aligned_cols=84 Identities=23% Similarity=0.300 Sum_probs=75.5
Q ss_pred ceEeecCCCCCCCceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccCCCCcccCcchhhhHHHhcCchhhhhhh
Q psy14945 2 VELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGPWCATPGHAQVREERAHPDMQHQHG 81 (629)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 81 (629)
|.|.+++|++..||+|++|+|++++..|++||++++||+|+++|++|||+|++.. .++.+++.+.|++++++++++.
T Consensus 50 I~I~ki~Ggs~~dS~li~Gvvi~k~~~~~~m~~~i~n~kIlll~~~Le~~~~~~~---~~~~~~~~~~E~~~l~~~v~kI 126 (261)
T cd03334 50 VKIKKIPGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPLEYQRVENK---LLSLDPVILQEKEYLKNLVSRI 126 (261)
T ss_pred eEEEEecCCCHHHcEEEeeEEEeCCCCCccCCcccCCCcEEEEeeeeccccccCC---HHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999852 2445889999999999999998
Q ss_pred hcccccc
Q psy14945 82 IREEGVV 88 (629)
Q Consensus 82 ~~~~~~~ 88 (629)
..-+.-+
T Consensus 127 ~~~g~nv 133 (261)
T cd03334 127 VALRPDV 133 (261)
T ss_pred HhcCCCE
Confidence 7655433
No 88
>KOG0356|consensus
Probab=98.94 E-value=4.2e-09 Score=114.01 Aligned_cols=124 Identities=25% Similarity=0.372 Sum_probs=101.9
Q ss_pred EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhh
Q psy14945 470 VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTK 549 (629)
Q Consensus 470 id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~ 549 (629)
+-+.+.-=+++....+.|++++.+.++ .+++|||||..- ..++..|+++...-+..++.+++++..||+.|
T Consensus 395 vGg~se~Ev~ekk~rv~dalnat~aav--------eeGivpGGG~al-l~~~~~l~~lk~~~~~~~k~G~eiv~~Al~~P 465 (550)
T KOG0356|consen 395 VGGHSEVEVNEKKDRVEDALNATRAAV--------EEGIVPGGGTAL-LRAIPVLDELKATNNFDQKVGVEIVKKALRLP 465 (550)
T ss_pred ecCcchhhhhhhhhhHHHHHHHHHHHh--------hcCcccCCchHH-HHhhhhhhhcccccchHhhhhHHHHHHHHhhh
Confidence 344455456677778888776655555 899999777655 99999999987633456777799999999987
Q ss_pred hHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 550 VERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 550 ~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
. +++|.|||.|+..++.+++. . .+|+|..+|+++||.+.||+||.+|-+.++.
T Consensus 466 ~------------------~~IakNAGvdg~~vv~Kv~~---~----~~gyda~~~ey~dlv~~GiidP~kVvr~al~ 518 (550)
T KOG0356|consen 466 A------------------QTIAKNAGVDGSVVVEKVLN---D----DYGYDAAKGEYVDLVEAGIIDPTKVVRTALT 518 (550)
T ss_pred H------------------HHHHHhcCCchHHHHHHHHh---h----hhhhhhhcccHHHHHhccCCChHHHHHHhhh
Confidence 7 77999999999999999982 1 5999999999999999999999999998874
No 89
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=98.63 E-value=2.5e-08 Score=99.38 Aligned_cols=72 Identities=31% Similarity=0.442 Sum_probs=59.7
Q ss_pred CceEeecCCCCCCCceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccCCCC-cccCcchhhhHHHhcCchhhhh
Q psy14945 1 MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGP-WCATPGHAQVREERAHPDMQHQ 79 (629)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~-~~~~~~~~~~~~e~~~~~~~~~ 79 (629)
.|.|.+++|++.+||++++|+++|++..||.||++++||+||++|++||| + ++.. -+++.++
T Consensus 45 ~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m~~~~~n~~Ill~~~~le~------vii~~~-----------~I~~~al 107 (209)
T cd03333 45 VIKVEKIPGGSLEDSELVVGVVFDKGYASPYMPKRLENAKILLLDCPLEY------VVIAEK-----------GIDDLAL 107 (209)
T ss_pred HEEEEEecCcChhhceeEeeEEEeccccCCCCCeEcCCCcEEEEeCCeeE------EEEecC-----------cccHHHH
Confidence 37899999999999999999999999999999999999999999999999 4 3221 1456666
Q ss_pred hhhccccccc
Q psy14945 80 HGIREEGVVL 89 (629)
Q Consensus 80 ~~~~~~~~~~ 89 (629)
+.+.+.++..
T Consensus 108 ~~l~~~~I~~ 117 (209)
T cd03333 108 HYLAKAGIMA 117 (209)
T ss_pred HHHHHCCCEE
Confidence 6666655543
No 90
>KOG0230|consensus
Probab=96.68 E-value=0.0013 Score=79.38 Aligned_cols=74 Identities=20% Similarity=0.208 Sum_probs=65.8
Q ss_pred ceEeecCCCCCCCceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccCCCCcccCcchhhhHHHhcCchhhh
Q psy14945 2 VELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGPWCATPGHAQVREERAHPDMQH 78 (629)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~~~~~~~~~~~~~e~~~~~~~~ 78 (629)
|++-.+.+|.-.||.+|+|+|.-+-..|-.|+.+++|+.|+++-.+|||++-..++....+ .++| |++|.+..+
T Consensus 364 VkvK~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~leyqrisn~lsS~et--vlqq-E~e~lk~~v 437 (1598)
T KOG0230|consen 364 VKVKCVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLEYQRISNQLSSIET--VLQQ-EKEYLKKVV 437 (1598)
T ss_pred eEEEEecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecchhhhhhhccccchHH--HHhh-HHHHHHHHH
Confidence 6788899999999999999999999999999999999999999999999999876654444 5666 788888877
Done!