Query psy14945
Match_columns 629
No_of_seqs 466 out of 2516
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 16:29:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14945.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14945hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_G T-complex protein 1 sub 100.0 3.1E-56 1.1E-60 496.6 33.2 366 101-510 139-508 (515)
2 3iyg_Z T-complex protein 1 sub 100.0 1.8E-56 6.2E-61 498.3 31.1 363 109-510 146-511 (517)
3 3iyg_A T-complex protein 1 sub 100.0 1E-55 3.4E-60 494.0 33.9 366 101-510 141-522 (529)
4 3iyg_H T-complex protein 1 sub 100.0 5.1E-55 1.8E-59 486.5 32.2 352 109-510 152-508 (515)
5 3ruv_A Chaperonin, CPN; double 100.0 4.6E-55 1.6E-59 489.7 30.2 354 110-509 157-512 (543)
6 3ko1_A Chaperonin; 9-fold symm 100.0 1.9E-55 6.5E-60 493.0 26.4 358 109-510 167-527 (553)
7 3iyg_B T-complex protein 1 sub 100.0 2.3E-54 7.8E-59 481.4 33.1 351 109-510 152-505 (513)
8 3aq1_B Thermosome subunit; gro 100.0 6.5E-55 2.2E-59 484.4 27.1 367 99-510 101-470 (500)
9 3iyg_E T-complex protein 1 sub 100.0 4E-54 1.4E-58 480.0 33.4 357 109-510 149-509 (515)
10 1a6d_B Thermosome (beta subuni 100.0 2.3E-54 7.9E-59 484.4 30.7 359 108-510 157-517 (543)
11 1q3q_A Thermosome alpha subuni 100.0 2.5E-54 8.6E-59 484.2 29.9 365 101-510 153-519 (548)
12 1a6d_A Thermosome (alpha subun 100.0 3.5E-54 1.2E-58 482.7 31.1 366 100-510 149-516 (545)
13 3iyg_D T-complex protein 1 sub 100.0 1.1E-53 3.6E-58 476.5 31.1 352 118-510 159-512 (518)
14 3p9d_E T-complex protein 1 sub 100.0 1.2E-53 3.9E-58 479.8 30.7 364 101-510 179-552 (562)
15 3p9d_C T-complex protein 1 sub 100.0 8.3E-54 2.8E-58 481.2 28.9 361 109-510 157-580 (590)
16 3p9d_A T-complex protein 1 sub 100.0 7.2E-54 2.4E-58 481.2 28.3 359 109-510 162-542 (559)
17 3p9d_F T-complex protein 1 sub 100.0 7.4E-55 2.5E-59 488.7 19.2 366 109-510 156-531 (546)
18 3p9d_G T-complex protein 1 sub 100.0 6.5E-54 2.2E-58 480.7 21.4 344 118-510 175-521 (550)
19 3p9d_D T-complex protein 1 sub 100.0 3.2E-54 1.1E-58 481.4 18.8 356 109-510 156-522 (528)
20 3iyg_Q T-complex protein 1 sub 100.0 5.6E-52 1.9E-56 462.3 32.4 350 112-510 153-506 (512)
21 3p9d_H T-complex protein 1 sub 100.0 4.9E-53 1.7E-57 475.3 22.5 360 109-510 165-542 (568)
22 3p9d_B T-complex protein 1 sub 100.0 1.6E-52 5.4E-57 468.3 17.0 350 109-509 159-511 (527)
23 1we3_A CPN60(groel); chaperoni 100.0 3.7E-42 1.3E-46 384.4 22.7 308 118-510 153-519 (543)
24 1kp8_A Groel protein; chaperon 100.0 1.3E-41 4.4E-46 379.6 18.7 344 79-510 96-517 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 3.6E-42 1.2E-46 384.2 12.9 306 118-510 155-519 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 6.3E-41 2.2E-45 373.2 17.6 344 79-510 96-515 (546)
27 3iyg_G T-complex protein 1 sub 100.0 4.4E-40 1.5E-44 366.6 15.5 361 222-628 60-496 (515)
28 3iyg_Z T-complex protein 1 sub 100.0 4.2E-40 1.5E-44 366.6 15.3 363 222-628 61-499 (517)
29 3iyg_A T-complex protein 1 sub 100.0 6.3E-40 2.1E-44 366.4 13.7 371 222-628 61-510 (529)
30 3iyg_H T-complex protein 1 sub 100.0 6.2E-40 2.1E-44 365.1 13.2 363 222-628 62-496 (515)
31 3iyg_B T-complex protein 1 sub 100.0 8.7E-40 3E-44 364.0 12.4 361 222-628 63-493 (513)
32 3iyg_Q T-complex protein 1 sub 100.0 2.6E-39 9E-44 360.3 14.2 359 222-628 62-494 (512)
33 3iyg_E T-complex protein 1 sub 100.0 3.6E-39 1.2E-43 359.4 12.6 361 222-628 61-497 (515)
34 3iyg_D T-complex protein 1 sub 100.0 9.5E-39 3.3E-43 356.1 12.9 360 222-628 62-500 (518)
35 3p9d_E T-complex protein 1 sub 100.0 4.9E-39 1.7E-43 361.1 7.5 366 222-628 96-540 (562)
36 3p9d_G T-complex protein 1 sub 100.0 5.1E-39 1.7E-43 360.2 5.2 360 222-628 75-509 (550)
37 3ruv_A Chaperonin, CPN; double 100.0 1.4E-38 4.8E-43 356.3 8.6 361 222-628 70-501 (543)
38 1q3q_A Thermosome alpha subuni 100.0 1.3E-38 4.4E-43 357.0 8.0 360 222-628 74-507 (548)
39 3p9d_C T-complex protein 1 sub 100.0 1.7E-38 5.6E-43 357.1 8.8 371 222-628 70-568 (590)
40 3aq1_B Thermosome subunit; gro 100.0 6E-39 2.1E-43 356.2 4.5 362 221-628 23-458 (500)
41 1a6d_A Thermosome (alpha subun 100.0 1.7E-38 5.7E-43 355.8 7.2 360 222-628 73-504 (545)
42 3ko1_A Chaperonin; 9-fold symm 100.0 4E-39 1.4E-43 360.9 1.6 360 222-628 81-515 (553)
43 1a6d_B Thermosome (beta subuni 100.0 1.7E-38 5.9E-43 355.8 6.4 360 222-628 72-505 (543)
44 3p9d_H T-complex protein 1 sub 100.0 8E-39 2.7E-43 359.8 3.1 376 222-628 77-530 (568)
45 3p9d_D T-complex protein 1 sub 100.0 2.5E-38 8.6E-43 353.2 5.5 371 222-628 70-510 (528)
46 3p9d_A T-complex protein 1 sub 100.0 1.1E-37 3.6E-42 350.1 9.9 360 222-628 75-530 (559)
47 3p9d_B T-complex protein 1 sub 100.0 1.7E-38 5.8E-43 354.9 -0.6 360 222-628 69-500 (527)
48 3p9d_F T-complex protein 1 sub 100.0 6.1E-38 2.1E-42 351.6 -0.6 364 222-628 68-519 (546)
49 1gml_A T-complex protein 1 sub 100.0 8.3E-31 2.8E-35 252.6 17.2 173 162-372 1-174 (178)
50 1we3_A CPN60(groel); chaperoni 100.0 1.8E-32 6.3E-37 306.1 4.0 132 467-628 376-507 (543)
51 1iok_A Chaperonin 60; chaperon 100.0 2.4E-32 8.2E-37 305.1 1.4 344 222-628 62-507 (545)
52 1kp8_A Groel protein; chaperon 100.0 2.6E-31 9E-36 296.5 2.0 128 468-628 378-505 (547)
53 3rtk_A 60 kDa chaperonin 2; he 100.0 7.3E-32 2.5E-36 300.3 -4.3 127 468-628 377-503 (546)
54 1ass_A Thermosome; chaperonin, 99.9 2.9E-26 9.8E-31 216.7 12.4 154 168-359 1-154 (159)
55 1gml_A T-complex protein 1 sub 99.4 6E-14 2E-18 134.8 6.5 77 13-89 2-82 (178)
56 1ass_A Thermosome; chaperonin, 99.3 8.1E-13 2.8E-17 124.5 3.6 72 18-89 1-76 (159)
57 3m6c_A 60 kDa chaperonin 1; ch 98.2 5E-08 1.7E-12 92.7 -4.1 135 165-353 2-148 (194)
58 1srv_A Protein (groel (HSP60 c 98.1 9.6E-08 3.3E-12 86.7 -2.9 131 170-354 1-143 (145)
59 3osx_A 60 kDa chaperonin; alph 98.0 2.7E-07 9.4E-12 87.9 -2.5 131 169-353 13-155 (201)
60 3m6c_A 60 kDa chaperonin 1; ch 20.9 36 0.0012 32.2 1.6 30 16-45 3-39 (194)
No 1
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-56 Score=496.59 Aligned_cols=366 Identities=25% Similarity=0.358 Sum_probs=322.8
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCcccccccc-ceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHIL-TCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~-~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
.+..+. .++.+|+..+ .++++.+++++|.. .... +......+++ +++|++++||++.||++++|++|++++
T Consensus 139 ~l~~va-~tsl~sK~i~~~~~~~~~i~vdav~~-V~~~----~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~ 212 (515)
T 3iyg_G 139 TMLNII-NSSITTKVISRWSSLACNIALDAVKT-VQFE----ENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDV 212 (515)
T ss_pred HHHHHH-HHHhcCCchhhHHHHHHHHHHHHHHh-cccc----cCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCC
Confidence 343333 3555667664 45667777777753 1100 0000112333 389999999999999999999999999
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.||+||++++||||++++|+|+|++++.+. ++.+++..++.+++.+|++++++. |..+.
T Consensus 213 ~~~~m~~~ien~kIll~~~~Le~~k~e~~~---------~v~is~~~~l~~~l~~E~~~l~~~--------v~kI~---- 271 (515)
T 3iyg_G 213 THPRMRRYIKNPRIVLLDSSLEYKKGESQT---------DIEITREEDFTRILQMEEEYIQQL--------CEDII---- 271 (515)
T ss_pred CCCCCcceeeeeEEEEEcccccccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH----
Confidence 999999999999999999999999999876 789999999999999999999999 88888
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcc-
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGY- 336 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~- 336 (629)
..++ ++ ++++++|++.+++||++++|.+++++++.+++|||++|||++++++++++++.+|+
T Consensus 272 ---------~~g~----~v----Ii~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii~~l~~l~~~~LG~~ 334 (515)
T 3iyg_G 272 ---------QLKP----DV----VITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTG 334 (515)
T ss_pred ---------hCCC----CE----EEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeeeccccccChhhcCCc
Confidence 4454 33 46799999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhh
Q psy14945 337 AGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYK 416 (629)
Q Consensus 337 ~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~ 416 (629)
|+.+++.++++++++||++|+++..|||+|||+++.+++|.+|+++||++++|++++++.+|||||++|++++.+|++++
T Consensus 335 a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~ 414 (515)
T 3iyg_G 335 AGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKS 414 (515)
T ss_pred ccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHh
Q psy14945 417 NTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 496 (629)
Q Consensus 417 ~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l 496 (629)
.++++.+|+++++||+||+.||++|++|+|+|+.+++++|+..|...++.++|+|+.+|++.|+.+.|||||+.||+++|
T Consensus 415 ~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al 494 (515)
T 3iyg_G 415 KAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTY 494 (515)
T ss_pred hccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHH
Confidence 89999999999999999999999999999999999999999888642345789999999999999999999999999999
Q ss_pred hhhhhcCCCCeEEe
Q psy14945 497 NSWIISGLHPRVIT 510 (629)
Q Consensus 497 ~~a~e~a~~~~iV~ 510 (629)
+.|+++|...+.++
T Consensus 495 ~~A~e~a~~iL~iD 508 (515)
T 3iyg_G 495 KTAVETAVLLLRID 508 (515)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988766554
No 2
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-56 Score=498.35 Aligned_cols=363 Identities=49% Similarity=0.740 Sum_probs=322.6
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++.+|+... .+.|+.+++++|..-. . +....++++++|++++||+..||++++|++|++++.||+||+++
T Consensus 146 tsl~sKi~~~~~d~la~l~vdaV~~V~-~-------~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~i 217 (517)
T 3iyg_Z 146 TSLRTKVHAELADVLTEAVVDSILAIK-K-------QDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRV 217 (517)
T ss_pred HHhccccchhHHHHHHHHHHHHhheec-c-------CCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccc
Confidence 444555443 5778888888886311 0 11234678899999999999999999999999999999999999
Q ss_pred cCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV 266 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~ 266 (629)
+||+|++++++|+|+|++.+. ++.+++..++.+++.+|++++.+. +..|..++.+. ...
T Consensus 218 en~kIll~~~~le~~k~e~~~---------~~~i~~~~~l~~~~~~E~~~i~~~--------v~~I~~~~~~v---~~~- 276 (517)
T 3iyg_Z 218 EDAYILTCNVSLEYEKTEVNS---------GFFYKSAEEREKLVKAERKFIEDR--------VKKIIELKKKV---CGD- 276 (517)
T ss_pred cCCeEEEecccccccccccce---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHHHhhhhh---hhc-
Confidence 999999999999999999876 899999999999999999999999 88887533110 000
Q ss_pred hhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCC-CcccceEEEEEE
Q psy14945 267 NLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAH-LGYAGSVFEHVL 345 (629)
Q Consensus 267 ~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~-lG~~~~v~e~~i 345 (629)
.-++ + .++++++|++.+++||++++|++++++++++++|||++|||++++++++++++. +|+|+ +++.++
T Consensus 277 ~~~~----l----vIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~i 347 (517)
T 3iyg_Z 277 SDKG----F----VVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTL 347 (517)
T ss_pred cCCc----e----EEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHHhCCEEecchhhCcccccCCcce-EEEEEE
Confidence 0011 1 156799999999999999999999999999999999999999999999999999 99999 999999
Q ss_pred cCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHH
Q psy14945 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRL 425 (629)
Q Consensus 346 ~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~ 425 (629)
++++++||++|+++..|||+|||+++.+++|.+|+++||++++|++++++++|||||++|++++.+|++++.++++.+|+
T Consensus 348 g~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 427 (517)
T 3iyg_Z 348 GEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQL 427 (517)
T ss_pred cCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 426 GIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 426 ~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
++++||+||+.+|++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.||.+.|||||+.||+++++.|+++|..
T Consensus 428 ~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~ 506 (517)
T 3iyg_Z 428 GVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE-SGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATN 506 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998864 457899999999999999999999999999999999999987
Q ss_pred CeEEe
Q psy14945 506 PRVIT 510 (629)
Q Consensus 506 ~~iV~ 510 (629)
.+.|+
T Consensus 507 iL~iD 511 (517)
T 3iyg_Z 507 ILLVD 511 (517)
T ss_pred HHHHH
Confidence 76665
No 3
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-55 Score=494.02 Aligned_cols=366 Identities=24% Similarity=0.338 Sum_probs=324.7
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGAR 178 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~ 178 (629)
.+..+. .++.+||... .++|+.++++|+..- +... +......++++|+|++++|+++.||++++|++|++++.
T Consensus 141 ~l~~va-~tsl~sK~~~~~~~~i~~livdAv~~V-~~~~---~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~ 215 (529)
T 3iyg_A 141 CLINAA-KTSMSSKVIGINGDFFANLVVDAVLAI-KYTD---IRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVG 215 (529)
T ss_pred HHHHHH-HHHhccCcccccHHHHHHHHHHHHHHH-hhhc---cCCCcccccceEEEEEecCCCccceEEEeeeEEecCcc
Confidence 344333 3555666654 577888888888742 1100 01112345677999999999999999999999999999
Q ss_pred CCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhh
Q psy14945 179 HPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQ 258 (629)
Q Consensus 179 ~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~ 258 (629)
||+||++++||||++++|+|+|++++.+. ++.+++..++..+..+|++++... +..|.
T Consensus 216 ~~~m~~~ien~kIlll~~~le~~k~e~~~---------~v~i~~~~~~~~i~~~E~~~l~~~--------v~kI~----- 273 (529)
T 3iyg_A 216 SQGMPKRIVNAKIACLDFSLQKTKMKLGV---------QVVITDPEKLDQIRQRESDITKER--------IQKIL----- 273 (529)
T ss_pred cccCCcccCCceEEEecCCcccccccCCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-----
Confidence 99999999999999999999999999876 899999999999999999999999 88887
Q ss_pred hHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccccc------CcC
Q psy14945 259 ADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGL------EPA 332 (629)
Q Consensus 259 Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l------~~~ 332 (629)
..++ .+ ++++++|++.+++||++++|.+++++++.+++|||++|||++++++..+ ++.
T Consensus 274 --------~~g~----nv----vi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~ 337 (529)
T 3iyg_A 274 --------ATGA----NV----ILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEAS 337 (529)
T ss_pred --------hcCC----CE----EEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCeeecchhcccchhccChh
Confidence 4443 22 4679999999999999999999999999999999999999999998665 367
Q ss_pred CCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHH
Q psy14945 333 HLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHAL 412 (629)
Q Consensus 333 ~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L 412 (629)
++|+|+.+++.+++++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|
T Consensus 338 ~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L 417 (529)
T 3iyg_A 338 MLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYL 417 (529)
T ss_pred hCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCC--------ceEEEEeccCCCCCCCccc
Q psy14945 413 QNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPG--------VAVGVDVNSGEVLNPTSAG 484 (629)
Q Consensus 413 ~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~--------~~~Gid~~t~~i~d~~e~~ 484 (629)
++++.++++.+|+++++||+||+.||++|++|+|+|+.+++++|+..|.. ++ .++|+|+.+|++.||.+.|
T Consensus 418 ~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~~~~~~~~~G~d~~~g~~~d~~~~g 496 (529)
T 3iyg_A 418 ENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNE-AQVNPERKNLKWIGLDLVNGKPRDNKQAG 496 (529)
T ss_pred HHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-cccccccccCceeeeeCCCCCccChhhcc
Confidence 99999999999999999999999999999999999999999999998864 22 5799999999999999999
Q ss_pred ccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 485 IYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 485 I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
||||+.||+++|+.|+++|...+.|+
T Consensus 497 V~dp~~vk~~al~~A~e~a~~iL~iD 522 (529)
T 3iyg_A 497 VFEPTIVKVKSLKFATEAAITILRID 522 (529)
T ss_pred CEecHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999998877765
No 4
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.1e-55 Score=486.47 Aligned_cols=352 Identities=23% Similarity=0.334 Sum_probs=321.2
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCC---c
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDM---P 183 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m---~ 183 (629)
++.+||... .++|+.++++|+..- +. ..+++.|+|++++||++.||++++|++|++++.||+| |
T Consensus 152 tsl~sK~~s~~~~~i~~livdAv~~V-~~----------~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p 220 (515)
T 3iyg_H 152 TALSSKLISQQKAFFAKMVVDAVMML-DD----------LLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQP 220 (515)
T ss_pred HHhcCCcccccHHHHHHHHHHHHHHh-cc----------cCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCC
Confidence 445566543 577888889888743 21 2356789999999999999999999999999999975 8
Q ss_pred ccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHH
Q psy14945 184 KSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYI 263 (629)
Q Consensus 184 ~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll 263 (629)
++++||||++++++|+|++++.+. ++.+++..++.+++.+|++++... +..+.
T Consensus 221 ~~~en~kIll~~~~Le~~k~e~~~---------~v~is~~~~l~~~~~~E~~~l~~~--------le~I~---------- 273 (515)
T 3iyg_H 221 KKYHNPMIALLNVELELKAEKDNA---------EIRVHTVEDYQAIVDAEWNILYDK--------LEKIH---------- 273 (515)
T ss_pred ccccccEEEEEcccccccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH----------
Confidence 999999999999999999999876 889999999999999999999998 88887
Q ss_pred HHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEE
Q psy14945 264 AEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEH 343 (629)
Q Consensus 264 ~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~ 343 (629)
..++ .+ ++++++|++.+++||++++|++++++++.+++|||++|||++++++++++++.+|+|+.+++.
T Consensus 274 ---~~g~----~v----vi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ii~~l~~~~~~~LG~a~~v~~~ 342 (515)
T 3iyg_H 274 ---HSGA----KV----VLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEET 342 (515)
T ss_pred ---hcCC----cE----EEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCEEeeccccCCHHHCCcccEEEEE
Confidence 3443 22 467999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcch
Q psy14945 344 VLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKS 423 (629)
Q Consensus 344 ~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~ 423 (629)
+++++++++|++|+++..|||++||+++.+++|.+|+++||++++|++++++.+|||||++|++++.+|++++.++++.+
T Consensus 343 ~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e 422 (515)
T 3iyg_H 343 QIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQ 422 (515)
T ss_pred EEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998889999
Q ss_pred HHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcC
Q psy14945 424 RLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISG 503 (629)
Q Consensus 424 k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a 503 (629)
|+++++||+||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|
T Consensus 423 q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a 501 (515)
T 3iyg_H 423 QLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQ-GGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAA 501 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhc-cCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998864 4567899999999999999999999999999999999988
Q ss_pred CCCeEEe
Q psy14945 504 LHPRVIT 510 (629)
Q Consensus 504 ~~~~iV~ 510 (629)
...+.++
T Consensus 502 ~~iL~iD 508 (515)
T 3iyg_H 502 CLIVSVD 508 (515)
T ss_pred HHHHHHH
Confidence 8766554
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=4.6e-55 Score=489.73 Aligned_cols=354 Identities=30% Similarity=0.417 Sum_probs=320.9
Q ss_pred hhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccccc
Q psy14945 110 CNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVK 187 (629)
Q Consensus 110 ~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~ 187 (629)
+.+||... .++|+.++++|+..- +.. ....++++|+|++++|+++.||++++|++|++++.||+||++++
T Consensus 157 sl~sK~~~~~~~~i~~livdAv~~V-~~~-------~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~ 228 (543)
T 3ruv_A 157 SITGKGAEKAKEKLAEIIVEAVSAV-VDD-------EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVT 228 (543)
T ss_dssp HHHHTCGGGCCHHHHHHHHHHHHHH-CCT-------TSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEE
T ss_pred HhcccccchhHHHHHHHHHHHHHHh-hcc-------CCCcccceEEEEEcCCCCcccceeecceEEeccccCcccccccc
Confidence 33444443 477888888888753 221 01246778999999999999999999999999999999999999
Q ss_pred CeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHh
Q psy14945 188 NAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVN 267 (629)
Q Consensus 188 n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~ 267 (629)
||||++++++|+|++++.+. ++.+++..++.+++.+|++++... +..+. .
T Consensus 229 n~kIll~~~~Le~~k~e~~~---------~v~Iss~~~l~~~~~~E~~~l~~~--------ve~I~-------------~ 278 (543)
T 3ruv_A 229 DAKIALLNCAIEIKETETDA---------EIRITDPAKLMEFIEQEEKMLKDM--------VAEIK-------------A 278 (543)
T ss_dssp EEEEEEESSCBSCCCCSSCC---------CEEECSTTHHHHHHHHHHHHHHHH--------HHHHH-------------H
T ss_pred CcEEEEEcccccccccccCc---------eeEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-------------H
Confidence 99999999999999999876 789999999999999999999999 88887 3
Q ss_pred hccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcC
Q psy14945 268 LKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGE 347 (629)
Q Consensus 268 ~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~ 347 (629)
.++ .+ ++++++|++.+++||.+++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++.++++
T Consensus 279 ~g~----~v----vi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 279 SGA----NV----LFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp HTC----SE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETT
T ss_pred cCC----CE----EEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHHHHhCCceecccccCCHHHCCcccEEEEEEeCC
Confidence 443 22 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHH
Q psy14945 348 EKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGI 427 (629)
Q Consensus 348 ~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i 427 (629)
++++||++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.++++.+|+++
T Consensus 351 ~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i 430 (543)
T 3ruv_A 351 DSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAV 430 (543)
T ss_dssp EEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred ceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred HHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCe
Q psy14945 428 QAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPR 507 (629)
Q Consensus 428 ~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~ 507 (629)
++||+||+.||++|++|+|+|+.+++++|+..|...++.++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|...+
T Consensus 431 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL 510 (543)
T 3ruv_A 431 RAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLL 510 (543)
T ss_dssp HHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998851255789999999999999999999999999999999999887664
Q ss_pred EE
Q psy14945 508 VI 509 (629)
Q Consensus 508 iV 509 (629)
.+
T Consensus 511 ~i 512 (543)
T 3ruv_A 511 RI 512 (543)
T ss_dssp TC
T ss_pred hH
Confidence 43
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.9e-55 Score=493.01 Aligned_cols=358 Identities=28% Similarity=0.394 Sum_probs=323.4
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++.+||... .++|+.++++|+..- +... ......++++|+|++++|+++.||++++|++|++++.||+||+++
T Consensus 167 tsl~sK~~~~~~~~i~~livdAv~~V-~~~~----~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~i 241 (553)
T 3ko1_A 167 TSLSSKAVAGAREYIADIVVKAVTQV-AELR----GDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRL 241 (553)
T ss_dssp HHHTTSSCCTTHHHHHHHHHHHHHHH-CCCT----TSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCC
T ss_pred HHhhHHhhhhHHHHHHHHHHHHHHHH-HHhc----CCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCcccc
Confidence 444555543 477889999988753 2210 001135678899999999999999999999999999999999999
Q ss_pred cCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV 266 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~ 266 (629)
+||||++++++|+|++++.+. ++.+++..++.+++.+|++++... +..+.
T Consensus 242 en~kIll~d~~Le~~k~e~~~---------~v~Iss~~~l~~~~~~E~~~l~~~--------vekI~------------- 291 (553)
T 3ko1_A 242 ENAKIALIDASLEVEKPELDA---------EIRINDPTQMQKFLDEEENLIKEK--------VDKIL------------- 291 (553)
T ss_dssp BSCEEEEECSCBSCCCCTTTC---------CCCCCSHHHHHHHHHHHHHHHHHH--------HHHHH-------------
T ss_pred ccceEEEecCcccccCcccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-------------
Confidence 999999999999999999876 788999999999999999999998 88887
Q ss_pred hhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEc
Q psy14945 267 NLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346 (629)
Q Consensus 267 ~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~ 346 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++.+++
T Consensus 292 ~~g~----~v----vI~~~~I~~~al~~L~~~gI~~v~~v~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig 363 (553)
T 3ko1_A 292 ATGA----NV----IICQKGIDEVAQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVG 363 (553)
T ss_dssp TTCC----SE----EECSSCBCSHHHHHHHHHTCEEECCCCHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCS
T ss_pred hhcc----eE----EEeccChHHHHHHHHHhcchhhhhhhhhhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcC
Confidence 4443 22 467999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHH
Q psy14945 347 EEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLG 426 (629)
Q Consensus 347 ~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~ 426 (629)
+++++||++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.++++.+|++
T Consensus 364 ~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~ 443 (553)
T 3ko1_A 364 EDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLA 443 (553)
T ss_dssp SSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHH
T ss_pred cceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred HHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCC-ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 427 IQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPG-VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 427 i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~-~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
+++|++||+.||++|++|+|+|+.+++++|+..|.. ++ .++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|..
T Consensus 444 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~ 522 (553)
T 3ko1_A 444 VEAYANALESLVSILIENAGFDPIDLLMKLRSTHEN-ENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATL 522 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCS-GGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhC-cCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheE
Confidence 999999999999999999999999999999998864 33 6799999999999999999999999999999999998887
Q ss_pred CeEEe
Q psy14945 506 PRVIT 510 (629)
Q Consensus 506 ~~iV~ 510 (629)
.+.++
T Consensus 523 iL~iD 527 (553)
T 3ko1_A 523 VLRID 527 (553)
T ss_dssp HHHEE
T ss_pred EEehH
Confidence 76554
No 7
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=2.3e-54 Score=481.38 Aligned_cols=351 Identities=24% Similarity=0.317 Sum_probs=320.5
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++.+||... .++|+.++++|+..- +.. .+++.|+|++++||++.||++++|++|++++.|| ||+++
T Consensus 152 tslssK~~~~~~~~i~~livdAv~~V-~~~----------~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~ 219 (513)
T 3iyg_B 152 TTLSSKLLTHHKDHFTKLAVEAVLRL-KGS----------GNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKRI 219 (513)
T ss_pred hhhcccccccchHHHHHHHHHHHHHh-ccc----------CCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-Cceee
Confidence 445666543 567888999888743 221 3578899999999999999999999999999998 99999
Q ss_pred cCeeEEEeeccccccccc-cCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSS-QGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~-~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
+||||++++++|+|++++ .+. ++.+++..++..++.+|++++.+. +..+.
T Consensus 220 en~kIll~~~~Le~~k~e~~~~---------~v~iss~~~l~~~~~~E~~~l~~~--------le~I~------------ 270 (513)
T 3iyg_B 220 ENAKILIANTGMDTDKIKIFGS---------RVRVDSTAKVAEIEHAEKEKMKEK--------VERIL------------ 270 (513)
T ss_pred cCceEEEEcCCcccccccccCC---------ceEEcCHHHHHHHHHHHHHHHHHH--------HHHHH------------
Confidence 999999999999999998 766 788999999999999999999998 88887
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i 345 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++..+
T Consensus 271 -~~g~----~v----vi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~i 341 (513)
T 3iyg_B 271 -KHGI----NC----FINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMI 341 (513)
T ss_pred -hcCC----CE----EEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEecccccCCHhHCCcccEEEEEEE
Confidence 3443 22 46799999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHH
Q psy14945 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRL 425 (629)
Q Consensus 346 ~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~ 425 (629)
+++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++.+|||||++|++++.+|++++.++++.+|+
T Consensus 342 g~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~ 421 (513)
T 3iyg_B 342 GEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAV 421 (513)
T ss_pred CCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 426 GIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 426 ~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
++++|++||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|..
T Consensus 422 ~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~ 500 (513)
T 3iyg_B 422 AMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSE-GKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEV 500 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998864 556899999999999999999999999999999999998887
Q ss_pred CeEEe
Q psy14945 506 PRVIT 510 (629)
Q Consensus 506 ~~iV~ 510 (629)
.+.++
T Consensus 501 iL~id 505 (513)
T 3iyg_B 501 ILRVD 505 (513)
T ss_pred HHHHH
Confidence 66554
No 8
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=6.5e-55 Score=484.35 Aligned_cols=367 Identities=26% Similarity=0.377 Sum_probs=306.2
Q ss_pred hhhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCcccccc-ccceeEEEecCCCccceEEEEeEEEec
Q psy14945 99 PKSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAH-ILTCNISMEYEKSDVCIILVKGVVLNH 175 (629)
Q Consensus 99 ~~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~i~i~~i~Ggs~~dS~li~Gvv~~~ 175 (629)
++.+.... .|+.+||... .++|+.++++|+..- +... ......+ +++|+|++++|+++.||++++|++|++
T Consensus 101 ~~~l~~va-~tsl~sKi~~~~~~~i~~li~dAv~~v-~~~~----~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk 174 (500)
T 3aq1_B 101 EAALIKIA-GTAITGKGAEAYKEKLSALTVKAVRSI-VEEE----EDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDK 174 (500)
T ss_dssp HHHHHHHH-HTTCCSSSTTSSHHHHHHHHHHHHTTS-EECC----SSSCEECHHHHEEEEEEESSCGGGCEEESEEEESC
T ss_pred HHHHHHHH-HHHhhcccccccHHHHHHHHHHHHHHh-cccc----cCCccccccccEEEEEecCCCccceEEEeeeEEee
Confidence 34444444 4666777775 577999999999752 2100 0001234 678999999999999999999999999
Q ss_pred cCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHH
Q psy14945 176 GARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGEL 255 (629)
Q Consensus 176 ~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~el 255 (629)
++.||+||++++||||++++++|++++++.+. ++.+++..++.+++.+|++++... +..+.
T Consensus 175 ~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~---------~v~i~~~~~l~~~~~~E~~~l~~~--------le~I~-- 235 (500)
T 3aq1_B 175 ERSHPNMPEKVENAKILLLSCPVEFRKTEVDS---------EIKITSPGQMQLFLDQEEKMMREM--------AEKVI-- 235 (500)
T ss_dssp CCSSTTSCSEEEEEEEEEESSCBCC----------------------------------CHHHHH--------HHHHH--
T ss_pred cCCCCCCcccccCCEEEEEeCCccccccccce---------eEeeCCHHHHHHHHHHHHHHHHHH--------HHHHH--
Confidence 99999999999999999999999999999876 788999999999999999999998 88887
Q ss_pred HhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCc
Q psy14945 256 LKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLG 335 (629)
Q Consensus 256 L~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG 335 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++++++|||++|||++++++++++++.+|
T Consensus 236 -----------~~g~----~l----vi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG 296 (500)
T 3aq1_B 236 -----------ASGA----NV----VFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVG 296 (500)
T ss_dssp -----------TTCC----SE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCE
T ss_pred -----------HhCc----CE----EEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCC
Confidence 4443 22 4679999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 336 YAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 336 ~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
+|+.+++.+++++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|+++
T Consensus 297 ~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~ 376 (500)
T 3aq1_B 297 TAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEY 376 (500)
T ss_dssp EEEEEEEEECSSSEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHH
T ss_pred CceEEEEEEecCeEEEEEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHH
Q psy14945 416 KNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 495 (629)
Q Consensus 416 ~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~ 495 (629)
+.++++.+|+++++||+||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++
T Consensus 377 ~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~a 455 (500)
T 3aq1_B 377 ASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEK-GNKNAGLNVYTGEVVDMWENDVIEPLRIKTQA 455 (500)
T ss_dssp HHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHT-TCTTEEECTTTCCEEETTTTTCEEEHHHHHHH
T ss_pred hhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcC-CCCCeeEeCCCCCccchHhcCCCCCHHHHHHH
Confidence 98889999999999999999999999999999999999999988764 45679999999999999999999999999999
Q ss_pred hhhhhhcCCCCeEEe
Q psy14945 496 INSWIISGLHPRVIT 510 (629)
Q Consensus 496 l~~a~e~a~~~~iV~ 510 (629)
|+.|+++|...+.++
T Consensus 456 l~~A~e~a~~iL~iD 470 (500)
T 3aq1_B 456 INAAMEATVMILRID 470 (500)
T ss_dssp HHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998887776
No 9
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4e-54 Score=479.98 Aligned_cols=357 Identities=23% Similarity=0.302 Sum_probs=320.0
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++.+|+..+ .+.|+.+++++|..- ... .....++++|+|++++||++.||++++|++|++++.||+||+.+
T Consensus 149 tsl~sK~i~~~~~~l~~l~~dav~~V-~~~------~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~ 221 (515)
T 3iyg_E 149 TTLGSKVVNSCHRQMAEIAVNAVLTV-ADM------QRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQV 221 (515)
T ss_pred HHhcccchhHHHHHHHHHHHHHHHhh-ccc------ccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccC
Confidence 333455544 467777888887631 110 01124578899999999999999999999999999999999999
Q ss_pred cCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV 266 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~ 266 (629)
+||||++++|+|++++++.+. .+.+++..++.+++.+|++++... +..+.
T Consensus 222 ~~~kIall~~~le~~k~~~~~---------~~~is~~~~l~~~~~~E~~~l~~~--------lekI~------------- 271 (515)
T 3iyg_E 222 EDAKIAILTCPFEPPKPKTKH---------KLDVTSVEDFKALQKYEKEKFEEM--------IRQIK------------- 271 (515)
T ss_pred CCceEEEEcCccccccccccc---------eeeeCCHHHHHHHHHHHHHHHHHH--------HHHHH-------------
Confidence 999999999999999988765 788999999999999999999998 88887
Q ss_pred hhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEc
Q psy14945 267 NLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLG 346 (629)
Q Consensus 267 ~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~ 346 (629)
..++ .+ ++++++|++.++++|.+++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++.+++
T Consensus 272 ~~g~----~v----vi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig 343 (515)
T 3iyg_E 272 ETGA----NL----AVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFG 343 (515)
T ss_pred hcCC----CE----EEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEecccccCCHHHCCcceEEEEEEec
Confidence 3343 22 457999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C--eeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchH
Q psy14945 347 E--EKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSR 424 (629)
Q Consensus 347 ~--~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k 424 (629)
+ +++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.++++.+|
T Consensus 344 ~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q 423 (515)
T 3iyg_E 344 TTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQ 423 (515)
T ss_pred cccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHH
Confidence 7 89999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCC
Q psy14945 425 LGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGL 504 (629)
Q Consensus 425 ~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~ 504 (629)
+++++|++||+.||++|++|+|+|+.+++.+|+..|...++.++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|.
T Consensus 424 ~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~ 503 (515)
T 3iyg_E 424 YAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVR 503 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988864245689999999999999999999999999999999999988
Q ss_pred CCeEEe
Q psy14945 505 HPRVIT 510 (629)
Q Consensus 505 ~~~iV~ 510 (629)
..+.|+
T Consensus 504 ~iL~iD 509 (515)
T 3iyg_E 504 MILKID 509 (515)
T ss_pred HHHhHH
Confidence 776654
No 10
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.3e-54 Score=484.39 Aligned_cols=359 Identities=25% Similarity=0.394 Sum_probs=325.5
Q ss_pred hhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccc
Q psy14945 108 LTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKS 185 (629)
Q Consensus 108 ~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~ 185 (629)
.|+.+||... .++|+.++++|+..- +... ......++++|+|++++|+++.||++++|++|++++.||+||++
T Consensus 157 ~tsl~sKi~~~~~~~i~~livdAv~~v-~~~~----~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ 231 (543)
T 1a6d_B 157 QTSLNSKSASVAKDKLAEISYEAVKSV-AELR----DGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDV 231 (543)
T ss_dssp HHHHTTSGGGGGHHHHHHHHHHHHHHH-EEEC----SSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSE
T ss_pred HHHhccccccccHHHHHHHHHHHHHHh-cccc----cCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcce
Confidence 4555666665 477999999998753 1100 00012457789999999999999999999999999999999999
Q ss_pred ccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 186 VKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 186 i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
++||||++++++|++++++.+. ++.+++..++.+++.+|++++... +..+.
T Consensus 232 ien~kIll~~~~Le~~k~e~~~---------~v~i~~~~~l~~~~~~E~~~l~~~--------le~I~------------ 282 (543)
T 1a6d_B 232 VKDAKIALLDAPLEIKKPEFDT---------NLRIEDPSMIQKFLAQEENMLREM--------VDKIK------------ 282 (543)
T ss_dssp EEEEEEEEESSCBSCCCCSSEE---------EECCCSTTHHHHHHHHHHHHHHHH--------HHHHH------------
T ss_pred ecCCeEEEEecccccccccCCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH------------
Confidence 9999999999999999999876 889999999999999999999998 88887
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i 345 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++.++
T Consensus 283 -~~g~----~l----vi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~i 353 (543)
T 1a6d_B 283 -SVGA----NV----VITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKV 353 (543)
T ss_dssp -HTTC----CE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEE
T ss_pred -HcCC----CE----EEECCCcCHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCceecccccCCHHHCCCceEEEEEEe
Confidence 4443 22 46799999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHH
Q psy14945 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRL 425 (629)
Q Consensus 346 ~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~ 425 (629)
+++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.++++.+|+
T Consensus 354 g~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~ 433 (543)
T 1a6d_B 354 GEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQL 433 (543)
T ss_dssp TTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHH
T ss_pred cCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 426 GIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 426 ~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
++++|++||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|.+.|+.+.|||||+.||+++|+.|+++|..
T Consensus 434 ~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~ 512 (543)
T 1a6d_B 434 AIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAK-GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIM 512 (543)
T ss_dssp HHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHT-TCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhC-CCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988764 456799999999999999999999999999999999999888
Q ss_pred CeEEe
Q psy14945 506 PRVIT 510 (629)
Q Consensus 506 ~~iV~ 510 (629)
.+.++
T Consensus 513 iL~id 517 (543)
T 1a6d_B 513 ILRID 517 (543)
T ss_dssp HHHEE
T ss_pred HHHHH
Confidence 76554
No 11
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.5e-54 Score=484.23 Aligned_cols=365 Identities=31% Similarity=0.454 Sum_probs=326.6
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGAR 178 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~ 178 (629)
.+.... .|+.+||... .++|+.++++|+..- +... + .....++++|+|++++|++++||++++|++|++++.
T Consensus 153 ~l~~va-~tsl~sKi~~~~~~~i~~livdAv~~V-~~~~---~-g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~ 226 (548)
T 1q3q_A 153 TLLKIA-ATSITGKNAESHKELLAKLAVEAVKQV-AEKK---D-GKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVV 226 (548)
T ss_dssp HHHHHH-HHHSCSSTTGGGHHHHHHHHHHHHHHH-CEES---S-SSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCS
T ss_pred HHHHHH-HHHhhccccccchHHHHHHHHHHHHHh-cccc---C-CCccccCCeEEEEEecCCCccceEEEeeEEEeccCC
Confidence 343333 4555676665 477999999999853 2100 0 001346789999999999999999999999999999
Q ss_pred CCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhh
Q psy14945 179 HPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQ 258 (629)
Q Consensus 179 ~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~ 258 (629)
||+||++++||||++++++|++++++.+. ++.+++..++.+++.+|++++... +..+.
T Consensus 227 ~~~m~~~ien~kIll~~~~Le~~k~e~~~---------~v~i~~~~~l~~~~~~E~~~l~~~--------le~I~----- 284 (548)
T 1q3q_A 227 HPRMPKRVENAKIALINEALEVKKTETDA---------KINITSPDQLMSFLEQEEKMLKDM--------VDHIA----- 284 (548)
T ss_dssp STTSCSEESSEEEEEECSCBSCCCCSSCC---------CEEECSHHHHHHHHHHHHHHHHHH--------HHHHH-----
T ss_pred CCCCcceecCCEEEEEecCcCcccccCCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-----
Confidence 99999999999999999999999999887 899999999999999999999998 88887
Q ss_pred hHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccc
Q psy14945 259 ADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAG 338 (629)
Q Consensus 259 Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~ 338 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++++++|||++|||++++++++++++.+|+|+
T Consensus 285 --------~~g~----~l----vi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~ 348 (548)
T 1q3q_A 285 --------QTGA----NV----VFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAE 348 (548)
T ss_dssp --------HHTC----CE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEES
T ss_pred --------HhCc----CE----EEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHHHHHHhCCeEecccccCCHHHCCCce
Confidence 3443 22 4679999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhh
Q psy14945 339 SVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNT 418 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~ 418 (629)
.+++.+++++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.+
T Consensus 349 ~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~ 428 (548)
T 1q3q_A 349 VVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQ 428 (548)
T ss_dssp EEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhh
Q psy14945 419 VKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498 (629)
Q Consensus 419 i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~ 498 (629)
+++.+|+++++||+||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+.
T Consensus 429 ~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 507 (548)
T 1q3q_A 429 VGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKS 507 (548)
T ss_dssp HCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHH-HCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-CCCCcceeCCCCCccchhhcCCEecHHHHHHHHHH
Confidence 88899999999999999999999999999999999999987753 34579999999999999999999999999999999
Q ss_pred hhhcCCCCeEEe
Q psy14945 499 WIISGLHPRVIT 510 (629)
Q Consensus 499 a~e~a~~~~iV~ 510 (629)
|+++|...+.++
T Consensus 508 A~e~a~~iL~iD 519 (548)
T 1q3q_A 508 ASEAAIMILRID 519 (548)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHH
Confidence 999887765443
No 12
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=3.5e-54 Score=482.75 Aligned_cols=366 Identities=28% Similarity=0.418 Sum_probs=328.3
Q ss_pred hhHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccC
Q psy14945 100 KSVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGA 177 (629)
Q Consensus 100 ~~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~ 177 (629)
+.+.... .|+.+||... .++|+.++++|+..- +... + .....++++|+|.+++|++++||++++|++|++++
T Consensus 149 ~~l~~va-~tsl~sKi~~~~~~~i~~livdAv~~v-~~~~---~-g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~ 222 (545)
T 1a6d_A 149 ATLRKIA-LTALSGKNTGLSNDFLADLVVKAVNAV-AEVR---D-GKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEK 222 (545)
T ss_dssp HHHHHHH-HHHTTTSSCCSTHHHHHHHHHHHHHHH-CEES---S-SSEECCGGGEEEEECCCSCSTTCEEESEEEESCCC
T ss_pred HHHHHHH-HHHHhcccccccHHHHHHHHHHHHHHH-hccc---C-CCcccccceEEEEEecCCCceeeEEEeeEEEeccC
Confidence 3344443 4556677665 577999999999753 2110 0 00134678999999999999999999999999999
Q ss_pred CCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHh
Q psy14945 178 RHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLK 257 (629)
Q Consensus 178 ~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~ 257 (629)
.||+||++++||||++++++|++++++.+. ++.+++..++.+++.+|++++... +..+.
T Consensus 223 ~~~~m~~~ien~kIll~~~~Le~~k~e~~~---------~v~i~~~~~l~~~~~~E~~~l~~~--------le~I~---- 281 (545)
T 1a6d_A 223 VHSKMPDVVKNAKIALIDSALEIKKTEIEA---------KVQISDPSKIQDFLNQETNTFKQM--------VEKIK---- 281 (545)
T ss_dssp SCTTSCSEEEEEEEEEECSCBSCCCCSSCC---------EEEECSTTHHHHHHHHHHHHHHHH--------HHHHH----
T ss_pred CCCCCcceecCCEEEEEecCCCcccccCCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH----
Confidence 999999999999999999999999999887 899999999999999999999998 88887
Q ss_pred hhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCccc
Q psy14945 258 QADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYA 337 (629)
Q Consensus 258 ~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~ 337 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++.+++|||++|||++++++++++++.+|+|
T Consensus 282 ---------~~g~----~l----vi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a 344 (545)
T 1a6d_A 282 ---------KSGA----NV----VLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEA 344 (545)
T ss_dssp ---------HTTC----CE----EEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHHHHHHCCCEESSGGGCCGGGCEEE
T ss_pred ---------HhCC----CE----EEECCCccHHHHHHHHHCCeeEeccCCHHHHHHHHHHhCCeeecccccCCHHHCCCc
Confidence 3443 22 467999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh
Q psy14945 338 GSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN 417 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~ 417 (629)
+.+++.+++++++++|++|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.
T Consensus 345 ~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~ 424 (545)
T 1a6d_A 345 ETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYAN 424 (545)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhh
Q psy14945 418 TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 497 (629)
Q Consensus 418 ~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~ 497 (629)
++++.+|+++++|++||+.||++|++|+|+|+.+++.+|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+
T Consensus 425 ~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 503 (545)
T 1a6d_A 425 SVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEK-GRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALE 503 (545)
T ss_dssp TSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHT-TCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-CCCCcceecccCccccchhcCccccHHHHHHHHH
Confidence 888999999999999999999999999999999999999988753 4567999999999999999999999999999999
Q ss_pred hhhhcCCCCeEEe
Q psy14945 498 SWIISGLHPRVIT 510 (629)
Q Consensus 498 ~a~e~a~~~~iV~ 510 (629)
.|+++|...+.++
T Consensus 504 ~A~e~a~~iL~id 516 (545)
T 1a6d_A 504 SAVEVATMILRID 516 (545)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHH
Confidence 9999887765554
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-53 Score=476.52 Aligned_cols=352 Identities=19% Similarity=0.251 Sum_probs=314.8
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccccCeeEEEeecc
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNIS 197 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~n~kIll~~~~ 197 (629)
.++|+.++++|+..- +. |......++++|+|.+++||++.||++++|++|++++.| +||++++||||++++|+
T Consensus 159 ~~~i~~livdAv~~V-~~-----~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~ 231 (518)
T 3iyg_D 159 SSLLSPMSVDAVMKV-ID-----PATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFC 231 (518)
T ss_pred HHHHHHHHHHHHHHh-hc-----cccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc-CCCccccCceEEEEEee
Confidence 367888888888742 21 001123467789999999999999999999999999999 99999999999999999
Q ss_pred ccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCcc
Q psy14945 198 MEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDC 277 (629)
Q Consensus 198 Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~ 277 (629)
|++++++.+. ++.+++..++.+++.+|++++... +..+. ..+++ +++|
T Consensus 232 Le~~k~~~~~---------~i~is~~~~~~~~~~~E~~~l~~~--------le~I~-------------~~g~~--lvi~ 279 (518)
T 3iyg_D 232 LSAPKTDMDN---------QIVVSDYVQMDRVLREERAYILNL--------VKQIK-------------KTGCN--VLLI 279 (518)
T ss_pred ccccccccCc---------eEEecCHHHHHHHHHHHHHHHHHH--------HHHHH-------------hcCCC--EEEE
Confidence 9999988665 788999999999999999999998 88887 33430 1111
Q ss_pred ccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcC-eeEEEEeec
Q psy14945 278 STSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGE-EKFTFVEEC 356 (629)
Q Consensus 278 ~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~-~~~~~~~~~ 356 (629)
. .++.+++|++.+++||.+++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++.++++ +++++|++|
T Consensus 280 ~-k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~ 358 (518)
T 3iyg_D 280 Q-KSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGC 358 (518)
T ss_pred e-ccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECC
Confidence 0 11227999999999999999999999999999999999999999999999999999999999999998 799999999
Q ss_pred CC-CccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHh
Q psy14945 357 KN-PQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALL 435 (629)
Q Consensus 357 ~~-~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe 435 (629)
++ +..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.++++.+|+++++||+||+
T Consensus 359 ~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 438 (518)
T 3iyg_D 359 ASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAME 438 (518)
T ss_pred CCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Confidence 88 89999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred hhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 436 IIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 436 ~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|...+.|+
T Consensus 439 ~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD 512 (518)
T 3iyg_D 439 VIPSTLAENAGLNPISTVTELRNRHAQ-GEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKID 512 (518)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhc-cCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999998864 45679999999999999999999999999999999999998776665
No 14
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.2e-53 Score=479.81 Aligned_cols=364 Identities=21% Similarity=0.244 Sum_probs=321.9
Q ss_pred hHHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCC
Q psy14945 101 SVKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGAR 178 (629)
Q Consensus 101 ~~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~ 178 (629)
.+..+. .++.+|+..+ .++|+.+++++|.. .... ..+..++++|+|++++||++.||++++|++|++++.
T Consensus 179 ~L~~vA-~tSl~sK~i~~~~d~la~l~vdAV~~-V~~~------~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~ 250 (562)
T 3p9d_E 179 FLLRAA-KTSLGSKIVSKDHDRFAEMAVEAVIN-VMDK------DRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFS 250 (562)
T ss_dssp HHHHHH-HHHHSSSTTTTTHHHHHHHHHHHHHT-SSTT------TCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCC
T ss_pred HHHHHH-HHhcCCchhHHHHHHHHHHHHHHhee-eccc------ccCCCCcccEEEEEecCCChhhhceeeeEEEecCCC
Confidence 344443 2444566654 56788888988873 2110 012346788999999999999999999999999999
Q ss_pred CCCCcccc------cCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHH
Q psy14945 179 HPDMPKSV------KNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVI 252 (629)
Q Consensus 179 ~~~m~~~i------~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i 252 (629)
||+||+++ +|+||++++|+|++++++.+. ++.+++..++.+++.+|++++... +..+
T Consensus 251 sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~---------~~~Iss~~~~~~~~~~E~~~l~~~--------lekI 313 (562)
T 3p9d_E 251 HPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKH---------KLDISSVEEYQKLQTYEQDKFKEM--------IDDV 313 (562)
T ss_dssp TTSCCC-----TTCSSCEECEEESCCSSCCCSSCC---------CCCCCSSSHHHHHHHHHHHHHHHH--------HHHH
T ss_pred CCCcCcccccccccccceEEEecccccccccccCc---------eEEECCHHHHHHHHHHHHHHHHHH--------HHHH
Confidence 99999999 999999999999999988776 788899999999999999999998 8888
Q ss_pred HHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcC
Q psy14945 253 GELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPA 332 (629)
Q Consensus 253 ~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~ 332 (629)
. ..++ .+ ++++++|++.++++|.+++|.+++++++.+++|||++|||++++++++++++
T Consensus 314 ~-------------~~g~----~v----vI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~ 372 (562)
T 3p9d_E 314 K-------------KAGA----DV----VICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKD 372 (562)
T ss_dssp H-------------HHTC----SC----CEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEESSSCCCTT
T ss_pred H-------------HcCC----cE----EEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEeccccCCHH
Confidence 7 3343 12 4579999999999999999999999999999999999999999999999999
Q ss_pred CCcccceEEEEEEcC--eeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHH
Q psy14945 333 HLGYAGSVFEHVLGE--EKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWH 410 (629)
Q Consensus 333 ~lG~~~~v~e~~i~~--~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~ 410 (629)
.+|+|+.+++.++++ +++++|++|+++..|||+|||+++.+++|.+|+++||++++|++++++++|||||++|++++.
T Consensus 373 ~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~ 452 (562)
T 3p9d_E 373 KLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSL 452 (562)
T ss_dssp SCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHH
T ss_pred HCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHH
Confidence 999999999999984 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhh
Q psy14945 411 ALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLT 490 (629)
Q Consensus 411 ~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~ 490 (629)
+|++++.++++.+|+++++||+||+.||++|++|+|+|+.+++++|+..|...++.++|+|+.+|++.|+.+.|||||+.
T Consensus 453 ~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 532 (562)
T 3p9d_E 453 AVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFI 532 (562)
T ss_dssp HHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHH
T ss_pred HHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHH
Confidence 99999988899999999999999999999999999999999999999887532446789999999999999999999999
Q ss_pred HHHHHhhhhhhcCCCCeEEe
Q psy14945 491 VKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 491 Vk~~~l~~a~e~a~~~~iV~ 510 (629)
||+++|+.|+++|...+.++
T Consensus 533 vk~~al~~A~e~a~~iL~iD 552 (562)
T 3p9d_E 533 GKKQQILLATQLCRMILKID 552 (562)
T ss_dssp HHHHHHHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988765543
No 15
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=8.3e-54 Score=481.20 Aligned_cols=361 Identities=22% Similarity=0.333 Sum_probs=315.4
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCC-CCCCC--Ccccccccc-ceeEEEecCCCccceEEEEeEEEeccCCCCCC
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGAR-HPDMP--KSVKNAHIL-TCNISMEYEKSDVCIILVKGVVLNHGARHPDM 182 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~-~~~~~--~~~~~~~~~-~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m 182 (629)
++.+|+... .++|+.++++|+..- +.. ..+.. .++ ..++. +|+|++++||++.||++++|++|++++.|+.|
T Consensus 157 tslsSK~~~~~~~~i~~livdAv~~V-~~~~~~~~~~~~~~-~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m 234 (590)
T 3p9d_C 157 ASIGTKYVIHWSEKMCELALDAVKTV-RKDLGQTVEGEPNF-EIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKM 234 (590)
T ss_dssp TTSTTSTTGGGHHHHHHHHHHHHTTS-TTCC------------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTS
T ss_pred HHHhcccccccHHHHHHHHHHHHHHh-cccccCcccccccc-ccchhhceEEEEecCCCcccceeeeEEEEecccCCCCC
Confidence 344555433 577899999998742 211 00000 011 11232 68999999999999999999999999999999
Q ss_pred cccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHH
Q psy14945 183 PKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIY 262 (629)
Q Consensus 183 ~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~l 262 (629)
|++++||||++++|+|+|+|++.+. ++.+++..++..++..|++++++. |..+.
T Consensus 235 ~~~~en~kIll~d~~Le~~K~e~~~---------~v~Is~~~~l~~il~~E~~~l~~~--------vekI~--------- 288 (590)
T 3p9d_C 235 SRHIENPRVVLLDCPLEYKKGESQT---------NIEIEKEEDWNRILQIEEEQVQLM--------CEQIL--------- 288 (590)
T ss_dssp CSCEESCCEECCCCCCSCCCCTTTE---------ECCBCSTTHHHHHHHHHHHHHHHH--------HHHHH---------
T ss_pred cceeeeeEEEEEcccccccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH---------
Confidence 9999999999999999999998876 788999999999999999999999 88888
Q ss_pred HHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcc-cceEE
Q psy14945 263 IAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGY-AGSVF 341 (629)
Q Consensus 263 l~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~-~~~v~ 341 (629)
..++ ++ ++++++|++.+++||++++|.+++++++.+++|||++|||++++++++++++.+|+ |+.++
T Consensus 289 ----~~g~----~v----II~e~~I~d~Al~~L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~ 356 (590)
T 3p9d_C 289 ----AVRP----TL----VITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFK 356 (590)
T ss_dssp ----TTCC----SE----ECCSSCCCTHHHHHHHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEE
T ss_pred ----hcCC----cE----EEecCCcCHHHHHHHHhccceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEE
Confidence 4454 33 56899999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEEcCeeEEEEeecCCCcc--------------------------------------------------------EEEE
Q psy14945 342 EHVLGEEKFTFVEECKNPQS--------------------------------------------------------VTIL 365 (629)
Q Consensus 342 e~~i~~~~~~~~~~~~~~~~--------------------------------------------------------~TIl 365 (629)
+..++++++++|++|+++.. |||+
T Consensus 357 ~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~ 436 (590)
T 3p9d_C 357 VEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIM 436 (590)
T ss_dssp CCEETTEECEEECC---------------------------------------------------------CCCSCCCEE
T ss_pred EEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEE
Confidence 88999999999999987766 9999
Q ss_pred ecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhc
Q psy14945 366 LKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNS 445 (629)
Q Consensus 366 l~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~Na 445 (629)
|||+++.+++|.+|+++||++++|++++++.+|||||++|++++.+|++++..+++.+|+++++|++||+.||++|++|+
T Consensus 437 lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na 516 (590)
T 3p9d_C 437 LRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNA 516 (590)
T ss_dssp EECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTT
T ss_pred EcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred CCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 446 GFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 446 G~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
|+|+.+++++|+..|.. ++.++|+|+.+|++.||.+.|||||+.||+++|+.|+++|...+.++
T Consensus 517 G~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id 580 (590)
T 3p9d_C 517 GGDPIRLLSQLRAKHAQ-GNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVD 580 (590)
T ss_dssp CSCHHHHHHHHHHHHTT-SCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEE
T ss_pred CCCHHHHHHHHHHHHhc-CCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998864 55678999999999999999999999999999999999998776654
No 16
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=7.2e-54 Score=481.21 Aligned_cols=359 Identities=25% Similarity=0.350 Sum_probs=321.9
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++.+||... .++|+.++++|+..- +..+ +......+++.|+|++++|+++.||++++|++|++++.||+||+++
T Consensus 162 tsl~sK~~~~~~~~i~~livdAv~~V-~~~~---~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~i 237 (559)
T 3p9d_A 162 TSMSSKIIGADSDFFSNMVVDALLAV-KTQN---SKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRI 237 (559)
T ss_dssp HTTSSSGGGTTHHHHHHHHHHHHHHH-CCEE---SSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEE
T ss_pred HHhccCcccchhHHHHHHHHHHHHHh-cccc---cCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceee
Confidence 444555554 577888889888753 2100 0111234677899999999999999999999999999999999999
Q ss_pred c--CeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHH
Q psy14945 187 K--NAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIA 264 (629)
Q Consensus 187 ~--n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~ 264 (629)
+ ||||++++++|++++++.+. ++.+++..++..++.+|++++... +..+.
T Consensus 238 e~~n~kIll~~~~Le~~k~e~~~---------~v~is~~~~l~~i~~~E~~~l~~~--------le~I~----------- 289 (559)
T 3p9d_A 238 AGGNVKIACLDLNLQKARMAMGV---------QINIDDPEQLEQIRKREAGIVLER--------VKKII----------- 289 (559)
T ss_dssp CSSSBCEEEETTCCSCCCCCTTC---------CEEECSSSCHHHHHHHHHHHHHHH--------HHHHH-----------
T ss_pred ccCCceEEEEeccccccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-----------
Confidence 9 99999999999999999876 899999999999999999999998 88887
Q ss_pred HHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccc------cccCcCCCcccc
Q psy14945 265 EVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSV------EGLEPAHLGYAG 338 (629)
Q Consensus 265 ~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~------~~l~~~~lG~~~ 338 (629)
..++ .+ ++++++|++.+++||.+++|.+++++++.+++|||++|||++++++ ++++++.+|+|+
T Consensus 290 --~~g~----~l----vI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~ 359 (559)
T 3p9d_A 290 --DAGA----QV----VLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCD 359 (559)
T ss_dssp --TTCC----SE----EEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEE
T ss_pred --hhCC----CE----EEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccce
Confidence 4443 22 4679999999999999999999999999999999999999999998 678889999999
Q ss_pred eEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhh
Q psy14945 339 SVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNT 418 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~ 418 (629)
.+++.+++++++++|++|+++..|||+|||+++.+++|.+|+++||++++|++++++++|||||++|++++.+|++++.+
T Consensus 360 ~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~ 439 (559)
T 3p9d_A 360 EVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATT 439 (559)
T ss_dssp EEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTT
T ss_pred EEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCc------------eEEEEeccCCCCCCCccccc
Q psy14945 419 VKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGV------------AVGVDVNSGEVLNPTSAGIY 486 (629)
Q Consensus 419 i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~------------~~Gid~~t~~i~d~~e~~I~ 486 (629)
+++.+|+++++||+||+.||++|++|+|+|+.+++++|+..|.+ ++. ++|+|+.+|++.|+.+.|||
T Consensus 440 ~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~ 518 (559)
T 3p9d_A 440 VGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAA-SQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVL 518 (559)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHT-TSCCC----CCCCCCCEEECTTSSSEEESTTSSCC
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhc-cccccccccccccccceeEECCCCcEeehhhccCE
Confidence 89999999999999999999999999999999999999998864 222 68999999999999999999
Q ss_pred chhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 487 DNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 487 D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
||+.||+++|+.|+++|...+.++
T Consensus 519 dp~~vk~~al~~A~e~a~~iL~id 542 (559)
T 3p9d_A 519 EPTISKVKSLKSALEACVAILRID 542 (559)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTEE
T ss_pred ecHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999988766554
No 17
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=7.4e-55 Score=488.67 Aligned_cols=366 Identities=40% Similarity=0.583 Sum_probs=318.8
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++.+|+..+ .+.|+.+++++|..-.. ......++++++|++++||+..||++++|++|++++.||+||+++
T Consensus 156 tsl~sKi~~~~~d~la~l~vdaV~~V~~-------~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~ 228 (546)
T 3p9d_F 156 SSLLTKVDADLTEVLTPIVTDAVLSVYD-------AQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRV 228 (546)
T ss_dssp HHTCSTTHHHHCSSHHHHHHHHHHHTHH-------HHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSB
T ss_pred HHhCCCcchhHHHHHHHHHHHhheEeec-------CCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCccee
Confidence 333455443 46677777777763110 001134678899999999999999999999999999999999999
Q ss_pred cCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhh-hHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQ-ADIYIAE 265 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~-Ae~ll~~ 265 (629)
+||||++++|+|+|++++.+. ++.+++..++.+++.+|++++++. +..|..++++ ++. .
T Consensus 229 en~kIll~~~~Le~~k~e~~~---------~~~i~~~~~~~~~~~~E~~~~~~~--------v~~I~~~~~~v~~~---~ 288 (546)
T 3p9d_F 229 KNAYVLILNVSLEYEKTEVNS---------GFFYSSADQRDKLAASERKFVDAK--------LKKIIDLKNEVCGM---D 288 (546)
T ss_dssp CSCCCCEECCCSSSCCCSSCB---------CCCCCSSSCHHHHHHHHHHHHHHH--------HHHHHHCC----------
T ss_pred cCceEEEecCcccccccccCc---------eEEEcCHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhhh---c
Confidence 999999999999999999886 788999999999999999999888 8888743311 000 0
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i 345 (629)
.-.+ + .++++++|++.+++||.+++|.+++++++++++|||++|||++++++++++++.+|+|+.+++..+
T Consensus 289 -~g~~----~----vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~i 359 (546)
T 3p9d_F 289 -PDKG----F----VIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETI 359 (546)
T ss_dssp ---------C----EEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCC
T ss_pred -cCCc----e----EEEecCcCcHHHHHHHHHCCCeeEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEe
Confidence 0001 1 256799999999999999999999999999999999999999999999999999999999999899
Q ss_pred cCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHh---hhhhcCcc
Q psy14945 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQN---YKNTVKGK 422 (629)
Q Consensus 346 ~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~---~~~~i~~~ 422 (629)
++++++||++|+++..|||+|||+++.+++|.+|+++||++++|++++++++|||||++|++++.+|++ |+..+++.
T Consensus 360 g~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~ 439 (546)
T 3p9d_F 360 GEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGK 439 (546)
T ss_dssp SSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSH
T ss_pred cCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 58888999
Q ss_pred hHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC----CCCceEEEEeccCCCCCCCcccccchhhHHHHHhhh
Q psy14945 423 SRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE----APGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 498 (629)
Q Consensus 423 ~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~----~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~ 498 (629)
+|+++++||+||+.||++|++|+|+|+.+++++|+..|.. .++.++|+|+.+|++.|+.+.|||||+.||+++|+.
T Consensus 440 eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 519 (546)
T 3p9d_F 440 TKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITG 519 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHH
Confidence 9999999999999999999999999999999999987751 123578999999999999999999999999999999
Q ss_pred hhhcCCCCeEEe
Q psy14945 499 WIISGLHPRVIT 510 (629)
Q Consensus 499 a~e~a~~~~iV~ 510 (629)
|+++|...+.|+
T Consensus 520 A~~~a~~iL~iD 531 (546)
T 3p9d_F 520 ATGIASNLLLCD 531 (546)
T ss_dssp HHHHHHHHHTEE
T ss_pred HHHHHHHHHHHH
Confidence 999988776654
No 18
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=6.5e-54 Score=480.71 Aligned_cols=344 Identities=20% Similarity=0.303 Sum_probs=315.5
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCC---CCcccccCeeEEEe
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHP---DMPKSVKNAHILTC 194 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~---~m~~~i~n~kIll~ 194 (629)
.++|+.++++|+.. .+.. ..++++++|++++|+++.||++++|++|++++.|| .||++++||||+++
T Consensus 175 ~~~i~~livdAv~~-V~~~---------~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~ 244 (550)
T 3p9d_G 175 ADFFVKMCVDAVLS-LDRN---------DLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSL 244 (550)
T ss_dssp HHHHHHHHHHHHHH-CCSS---------SCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEE
T ss_pred HhHHHHHHHHHHHH-hCcc---------ccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEe
Confidence 46788888888874 2321 23567899999999999999999999999999998 68999999999999
Q ss_pred eccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcccccc
Q psy14945 195 NISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFA 274 (629)
Q Consensus 195 ~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l 274 (629)
+++|++++++.+. ++.+++..++..++.+|++++.+. +..|. ..++
T Consensus 245 ~~~Le~~k~e~~~---------~v~is~~~~l~~il~~E~~~l~~~--------v~~I~-------------~~g~---- 290 (550)
T 3p9d_G 245 NVELELKAEKDNA---------EVRVEHVEDYQAIVDAEWQLIFEK--------LRQVE-------------ETGA---- 290 (550)
T ss_dssp CSCCSCCCCSSCE---------EEEECSSSHHHHHHHHHHHHHHHH--------HHHHH-------------TTTC----
T ss_pred ccccccccccccc---------eeeeCCHHHHHHHHHHHHHHHHHH--------HHHHH-------------hcCC----
Confidence 9999999998876 789999999999999999999888 88887 4443
Q ss_pred CccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeEEEEe
Q psy14945 275 PDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVE 354 (629)
Q Consensus 275 ~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~ 354 (629)
.+ ++++++|++.+++||++++|.+++++++.+++||+++|||++++++++++++.+|+|+.+++.+++++++++|+
T Consensus 291 ~v----Vi~~~~I~dla~~~L~~~gI~~v~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~ 366 (550)
T 3p9d_G 291 NI----VLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQ 366 (550)
T ss_dssp SE----EEESSCCCHHHHHTTGGGTCEEEECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEB
T ss_pred CE----EEECCCccHHHHHHHHHcCCccccCcCHHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEe
Confidence 22 46799999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred ecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHH
Q psy14945 355 ECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEAL 434 (629)
Q Consensus 355 ~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~AL 434 (629)
+|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.++++.+|+++++|++||
T Consensus 367 g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~AL 446 (550)
T 3p9d_G 367 GCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKAL 446 (550)
T ss_dssp CCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHH
T ss_pred cCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred hhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 435 LIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 435 e~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|...+.++
T Consensus 447 e~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id 521 (550)
T 3p9d_G 447 EVIPRQLCENAGFDAIEILNKLRLAHSK-GEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVD 521 (550)
T ss_dssp THHHHHHHHTSCSCHHHHHHHHHHHHHH-SCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999999988753 45678999999999999999999999999999999999888776554
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.2e-54 Score=481.44 Aligned_cols=356 Identities=19% Similarity=0.206 Sum_probs=321.6
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCC-Cccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPD-MPKS 185 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~-m~~~ 185 (629)
++.+|+... .++|+.++++|+..- +.. .....+++.|+|++++||++.||++++|++|++++.||+ ||++
T Consensus 156 tsl~sK~~~~~~~~i~~livdAv~~V-~~~------~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ 228 (528)
T 3p9d_D 156 TSLSSKIVSQYSSFLAPLAVDSVLKI-SDE------NSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTR 228 (528)
T ss_dssp HHSCSSSCSTTHHHHHHHHHHHHHTT-CCT------TTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSE
T ss_pred HHhcCCccchhHHHHHHHHHHHHHHh-ccc------cCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCccc
Confidence 444566554 577889999998742 220 112356788999999999999999999999999999999 9999
Q ss_pred ccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 186 VKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 186 i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
++||||++++++|++++++.+. ++.+++..++.+++.+|++++... +..+.
T Consensus 229 ien~kIll~~~~le~~k~~~~~---------~i~i~~~~~~~~~~~~E~~~l~~~--------le~I~------------ 279 (528)
T 3p9d_D 229 KEKAKIGLIQFQISPPKPDTEN---------NIIVNDYRQMDKILKEERAYLLNI--------CKKIK------------ 279 (528)
T ss_dssp ESSEEEEEECCCSSCCCCSSEE---------EEEESSSSHHHHHTHHHHHHHHHH--------HHHHH------------
T ss_pred ccCceEEEEeccccccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH------------
Confidence 9999999999999999998876 899999999999999999999998 88887
Q ss_pred HhhccccccCccccccccccCC-----CHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGI-----DPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSV 340 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i-----~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v 340 (629)
..++ .+ ++++++| ++.+++||.+++|.+++++++.+++|||++|||++++++++++++.+|+|+.+
T Consensus 280 -~~g~----~v----vi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v 350 (528)
T 3p9d_D 280 -KAKC----NV----LLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLV 350 (528)
T ss_dssp -HTTC----CE----EEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCE
T ss_pred -hcCC----CE----EEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccccCCHHHCCcccEE
Confidence 3443 22 4579999 99999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCeeEEEEeecC--C-CccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh
Q psy14945 341 FEHVLGEEKFTFVEECK--N-PQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN 417 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~--~-~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~ 417 (629)
++.++++.++++|.+|+ + +..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.
T Consensus 351 ~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 430 (528)
T 3p9d_D 351 EEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEAR 430 (528)
T ss_dssp ECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCT
T ss_pred EEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhh
Confidence 99999999999999998 5 78999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhh
Q psy14945 418 TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 497 (629)
Q Consensus 418 ~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~ 497 (629)
++++.+|+++++|++||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+
T Consensus 431 ~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~ 509 (528)
T 3p9d_D 431 SMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHEN-GELNDGISVRRSGTTNTYEEHILQPVLVSTSAIT 509 (528)
T ss_dssp TSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCS-SSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-cCCccceecCCCCccchHhccCeecHHHHHHHHH
Confidence 888999999999999999999999999999999999999988764 4567899999999999999999999999999999
Q ss_pred hhhhcCCCCeEEe
Q psy14945 498 SWIISGLHPRVIT 510 (629)
Q Consensus 498 ~a~e~a~~~~iV~ 510 (629)
.|+++|...+.|+
T Consensus 510 ~A~e~a~~iL~iD 522 (528)
T 3p9d_D 510 LASECVKSILRID 522 (528)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhhh
Confidence 9999887665543
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.6e-52 Score=462.32 Aligned_cols=350 Identities=20% Similarity=0.259 Sum_probs=314.6
Q ss_pred cccccc-hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccccCee
Q psy14945 112 ISMEYE-KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVKNAH 190 (629)
Q Consensus 112 ~s~~~~-~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~n~k 190 (629)
+||... .++|+.++++|+..- +.. ....++..++|.+++||++.||++++|++|++++.+ ||++++|||
T Consensus 153 ~sK~~~~~~~i~~livdAv~~V-~~~-------~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~k 222 (512)
T 3iyg_Q 153 MSKQYGNEVFLAKLIAQACVSI-FPD-------SGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG--DVTSVKDAK 222 (512)
T ss_pred CCCCccchHHHHHHHHHHHHHH-hcc-------CCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC--CCcccccCc
Confidence 444433 466888888888742 211 012467789999999999999999999999999876 999999999
Q ss_pred EEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc
Q psy14945 191 ILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM 270 (629)
Q Consensus 191 Ill~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~ 270 (629)
|+++++||++.+++.+. ++.+++..++..++.+|++++++. +..+. ..++
T Consensus 223 I~ll~~~le~~~~e~k~---------~v~Is~~~~l~~~~~~E~~~l~~~--------v~~I~-------------~~g~ 272 (512)
T 3iyg_Q 223 IAVYSCPFDGMITETKG---------TVLIKSAEELMNFSKGEENLMDAQ--------VKAIA-------------DTGA 272 (512)
T ss_pred eEEEecccccccccccc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-------------HhCC
Confidence 99999999999998876 788999999999999999999998 88887 3443
Q ss_pred ccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeE
Q psy14945 271 HKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKF 350 (629)
Q Consensus 271 ~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~ 350 (629)
.+ ++++++|++.+++||++++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++.+++++++
T Consensus 273 ----~v----vi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~ 344 (512)
T 3iyg_Q 273 ----NV----VVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQV 344 (512)
T ss_pred ----CE----EEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEecccccCCHHHCCcccEEEEEEeCCeEE
Confidence 22 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecC-CCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHH
Q psy14945 351 TFVEECK-NPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQA 429 (629)
Q Consensus 351 ~~~~~~~-~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~ 429 (629)
++|++|+ .+..|||+|||+++.+++|.+|+++||++++|++++++++|||||++|++++.+|++++.++++.+|+++++
T Consensus 345 ~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~ 424 (512)
T 3iyg_Q 345 VVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKK 424 (512)
T ss_pred EEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 9999996 478999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred HHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccC--CCCCCCcccccchhhHHHHHhhhhhhcCCCCe
Q psy14945 430 YAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSG--EVLNPTSAGIYDNLTVKRQIINSWIISGLHPR 507 (629)
Q Consensus 430 fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~--~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~ 507 (629)
|++||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.++ ++.|+.+.|||||+.||+++|+.|+++|...+
T Consensus 425 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL 503 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKANEVISKLYAVHQE-GNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVL 503 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998864 557899999965 99999999999999999999999999988766
Q ss_pred EEe
Q psy14945 508 VIT 510 (629)
Q Consensus 508 iV~ 510 (629)
.++
T Consensus 504 ~id 506 (512)
T 3iyg_Q 504 RVD 506 (512)
T ss_pred hHh
Confidence 554
No 21
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=4.9e-53 Score=475.26 Aligned_cols=360 Identities=21% Similarity=0.321 Sum_probs=316.3
Q ss_pred hhhcccccc-hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCccccc
Q psy14945 109 TCNISMEYE-KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSVK 187 (629)
Q Consensus 109 ~~~~s~~~~-~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i~ 187 (629)
++.+||... .++|+.++++|+..- +....+ .......++++|+|++++||++.||++++|++|++++. +||++++
T Consensus 165 tsl~sK~~~~~~~i~~livdAv~~V-~~~~~~-~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~--~m~~~i~ 240 (568)
T 3p9d_H 165 PVISSKKYGSEDILSELVSEAVSHV-LPVAQQ-AGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE--GHVKSLS 240 (568)
T ss_dssp HHHTTTSTTCHHHHHHHHHHHHTTS-CC----------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS--SGGGSCC
T ss_pred HHhhccCcchHHHHHHHHHHHHHHH-hhcccc-ccCCcccccceEEEEEccCCCcchheeeccEEEeeccc--CCcEEEe
Confidence 444455443 467888888888742 210000 00112356788999999999999999999999999974 7999999
Q ss_pred ---CeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHH
Q psy14945 188 ---NAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIA 264 (629)
Q Consensus 188 ---n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~ 264 (629)
||||++++|+|+|++++.+. ++.+++..++..++.+|++++++. +..|.
T Consensus 241 ~~~n~kIlll~~~Le~~k~e~~~---------~v~i~~~~~l~~~~~~E~~~l~~~--------v~~I~----------- 292 (568)
T 3p9d_H 241 EDKKHKVAVFTCPLDIANTETKG---------TVLLHNAQEMLDFSKGEEKQIDAM--------MKEIA----------- 292 (568)
T ss_dssp CCSSCEEEEECSCSSSCCCSSSC---------EEECCSHHHHHHHHHHHHHHHHHH--------HHHHH-----------
T ss_pred cCCcceEEEEccCccccccccCc---------eEEeCCHHHHHHHHHHHHHHHHHH--------HHHHH-----------
Confidence 99999999999999998876 788999999999999999999999 88887
Q ss_pred HHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEE
Q psy14945 265 EVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHV 344 (629)
Q Consensus 265 ~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~ 344 (629)
..++ .+ ++++++|++.+++||++++|.+++++++.+++|||++|||++++++++++++.+|+|+.+++.+
T Consensus 293 --~~g~----~v----vi~~~~I~~~al~~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ 362 (568)
T 3p9d_H 293 --DMGV----EC----IVAGAGVGELALHYLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTME 362 (568)
T ss_dssp --HTTC----CE----EEECSCCCHHHHHHHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCE
T ss_pred --hcCC----eE----EEECCCcChHHHHHHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEE
Confidence 4443 22 4679999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCeeEEEEeecC--CCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhh--CCCcccCCChHHHHHHHHHHhhhhhcC
Q psy14945 345 LGEEKFTFVEECK--NPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTID--DGAVVPGAGAFEVAAWHALQNYKNTVK 420 (629)
Q Consensus 345 i~~~~~~~~~~~~--~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~--~~~VV~GGG~~El~l~~~L~~~~~~i~ 420 (629)
++++++++|++|+ ++..|||+|||+++.+++|.+|+++||++++|++++ ++.+|||||++|++++.+|++++.+++
T Consensus 363 ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~ 442 (568)
T 3p9d_H 363 IGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTP 442 (568)
T ss_dssp ETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCC
T ss_pred ecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCC
Confidence 9999999999998 689999999999999999999999999999999999 999999999999999999999998899
Q ss_pred cchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-------CCCceEEEEeccCC---CCCCCcccccchhh
Q psy14945 421 GKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-------APGVAVGVDVNSGE---VLNPTSAGIYDNLT 490 (629)
Q Consensus 421 ~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-------~~~~~~Gid~~t~~---i~d~~e~~I~D~~~ 490 (629)
+.+|+++++||+||+.||++|++|+|+|+.+++++|+..|.. .++.++|+|+.+|+ +.|+.+.|||||+.
T Consensus 443 g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~ 522 (568)
T 3p9d_H 443 GLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLA 522 (568)
T ss_dssp STHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHH
Confidence 999999999999999999999999999999999999998753 13467899999997 99999999999999
Q ss_pred HHHHHhhhhhhcCCCCeEEe
Q psy14945 491 VKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 491 Vk~~~l~~a~e~a~~~~iV~ 510 (629)
||+++|+.|+++|...+.++
T Consensus 523 vk~~al~~A~e~a~~iL~iD 542 (568)
T 3p9d_H 523 TKKFAINVATEAATTVLSID 542 (568)
T ss_dssp HHHHHHHCCEECBCCC----
T ss_pred HHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999886
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.6e-52 Score=468.31 Aligned_cols=350 Identities=23% Similarity=0.320 Sum_probs=314.6
Q ss_pred hhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCCCCCcccc
Q psy14945 109 TCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHPDMPKSV 186 (629)
Q Consensus 109 ~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~~m~~~i 186 (629)
++.+||... .++|+.++++|+..- |.. .+++.|+|.+++||++.||++++|++|++++.||+ |+++
T Consensus 159 tSl~sK~~~~~~~~i~~li~dAv~~V-~~~----------~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~ 226 (527)
T 3p9d_B 159 TTLSSKILSQDKDHFAELATNAILRL-KGS----------TNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRI 226 (527)
T ss_dssp HHHTTSGGGGGHHHHHHHHHHHHHTT-CTT----------CCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CSCC
T ss_pred hccccCcccchHHHHHHHHHHHHHHh-ccc----------CCcceEEEEEcCCCCccccEEEEeEEEecccCCCC-Ceee
Confidence 333444443 467888888888742 221 14677899999999999999999999999999998 9999
Q ss_pred cCeeEEEeecccccccccc-CCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH
Q psy14945 187 KNAHILTCNISMEYEKSSQ-GGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE 265 (629)
Q Consensus 187 ~n~kIll~~~~Le~~k~~~-~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~ 265 (629)
+||||++++|+|++++++. +. ++.+++..++..++.+|++++.+. +..+.
T Consensus 227 ~n~kIlll~~~le~~k~~~~~~---------~v~i~~~~~l~~~~~~E~~~l~~~--------l~~I~------------ 277 (527)
T 3p9d_B 227 ENAKILIANTTLDTDKVKIFGT---------KFKVDSTAKLAQLEKAEREKMKNK--------IAKIS------------ 277 (527)
T ss_dssp SSCEEEEECSCSSCCCCSSCCC---------BCCCCHHHHHHHHHHHHHHHHHHH--------HHHHT------------
T ss_pred ecceEEEeccccccccccccCc---------eEEEcCHHHHHHHHHHHHHHHHHH--------HHHHH------------
Confidence 9999999999999999884 54 677888889999999999999998 88877
Q ss_pred HhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEE
Q psy14945 266 VNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVL 345 (629)
Q Consensus 266 ~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i 345 (629)
..++ .+ ++++++|++.++++|.+++|.+++++++.+++|++++|||++++++++++++.+|+|+.+++..+
T Consensus 278 -~~g~----~v----vi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 278 -KFGI----NT----FINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp -TTCC----BE----EESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCS
T ss_pred -hcCC----CE----EEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEe
Confidence 3443 22 46799999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHH
Q psy14945 346 GEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRL 425 (629)
Q Consensus 346 ~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~ 425 (629)
+++++++|.+|+++..|||+|||+++.+++|.+|+++||+++++++++++++|||||++|++++.+|++++.++++.+|+
T Consensus 349 g~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 428 (527)
T 3p9d_B 349 GEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSL 428 (527)
T ss_dssp SSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHH
T ss_pred cceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred HHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 426 GIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 426 ~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
++++|++||+.||++|++|+|+|+.+++++|+..|.. ++.++|+|+.+|++.|+.+.|||||+.||+++|+.|+++|..
T Consensus 429 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~ 507 (527)
T 3p9d_B 429 AVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYN-GISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEV 507 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHH-TCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-CCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988763 456789999999999999999999999999999999998876
Q ss_pred CeEE
Q psy14945 506 PRVI 509 (629)
Q Consensus 506 ~~iV 509 (629)
.+.+
T Consensus 508 iL~i 511 (527)
T 3p9d_B 508 LLRV 511 (527)
T ss_dssp HHHC
T ss_pred HHhH
Confidence 5443
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3.7e-42 Score=384.35 Aligned_cols=308 Identities=19% Similarity=0.274 Sum_probs=258.2
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccce-EEEEeEEEeccCCCCC-------CcccccCe
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCI-ILVKGVVLNHGARHPD-------MPKSVKNA 189 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS-~li~Gvv~~~~~~~~~-------m~~~i~n~ 189 (629)
.++|+.++++++.. .+.. +.++|. +|++++|| ++++|++|++++.||+ |+++++||
T Consensus 153 ~~~i~~li~dAv~~-V~~~-------------g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~ 216 (543)
T 1we3_A 153 DPEVGKLIADAMEK-VGKE-------------GIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDA 216 (543)
T ss_dssp CHHHHHHHHHHHHT-TCTT-------------SEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEE
T ss_pred CHHHHHHHHHHHHH-hCcC-------------CcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCc
Confidence 35566677777753 2210 224443 89999998 9999999999999985 66779999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|++++++|+. ..+ ++ .. +..+. ..+
T Consensus 217 ~Ill~d~~Is~----------------------~~~---l~--------~~--------le~i~-------------~~g 242 (543)
T 1we3_A 217 FILIVEKKVSN----------------------VRE---LL--------PI--------LEQVA-------------QTG 242 (543)
T ss_dssp EEEEESSCBCC----------------------HHH---HH--------HH--------HHHHH-------------TTT
T ss_pred eEEEECCCcCC----------------------HHH---HH--------HH--------HHHHH-------------hcC
Confidence 99999997631 111 11 12 34443 222
Q ss_pred cccccCccccccccccCCCHHHHHHHHHh------CcEEEe-----ccchhhHHHHHHHhCCccccc-----ccccCcCC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFARE------GIIALR-----RAKRRNMERLSLACGGTAMNS-----VEGLEPAH 333 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~------~I~vv~-----~v~~~dl~rIak~tGg~i~~s-----~~~l~~~~ 333 (629)
. .+ ++++++|++.++++|..+ +|.+++ ++++.+++|||++|||+++++ +++++.+.
T Consensus 243 ~----~l----vii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~ 314 (543)
T 1we3_A 243 K----PL----LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSM 314 (543)
T ss_dssp C----CE----EEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGG
T ss_pred C----CE----EEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHH
Confidence 2 11 456889999999999985 557777 667789999999999999996 78899999
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCC-----------------------------------ccEEEEecCCCccCHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNP-----------------------------------QSVTILLKGPNKHTLAQTK 378 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~-----------------------------------~~~TIll~g~~~~~l~e~~ 378 (629)
+|+|+.++ ++++++++|++|+++ ..|||+|||+++.+++|.+
T Consensus 315 LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~ 391 (543)
T 1we3_A 315 LGRAERVR---ITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKK 391 (543)
T ss_dssp CEEEEEEE---ECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHH
T ss_pred CCCceEEE---EEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHH
Confidence 99999987 467899999988764 5799999999999999999
Q ss_pred HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHH
Q psy14945 379 DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQE 458 (629)
Q Consensus 379 r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~ 458 (629)
|+++||+++++++++++ +|||||++|++++.+|++++.+..+.+|+++++|++||+.||++|++|+|+|+.+++++|+.
T Consensus 392 r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 470 (543)
T 1we3_A 392 HRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILA 470 (543)
T ss_dssp HHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99999999999999999 99999999999999999998878889999999999999999999999999999999999998
Q ss_pred hhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 459 ACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 459 ~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.|. +.++|+|..+|++.|+.+.|||||+.||+++|+.|+++|...+.++
T Consensus 471 ~h~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id 519 (543)
T 1we3_A 471 ETK---NPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTE 519 (543)
T ss_dssp CCS---CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEE
T ss_pred hcC---CCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 773 4678999999999999999999999999999999999888776554
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.3e-41 Score=379.63 Aligned_cols=344 Identities=16% Similarity=0.183 Sum_probs=273.4
Q ss_pred hhhhcccccccccCC----CCCCchhhHHHHhHhhhhccccc---------------chhhHHHHHHHHHhhhcCCCCCC
Q psy14945 79 QHGIREEGVVLNHGA----RHPDMPKSVKNAHILTCNISMEY---------------EKSDVCIILVKGVVLNHGARHPD 139 (629)
Q Consensus 79 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~---------------~~~~i~~~~v~~v~~~~~~~~~~ 139 (629)
+.++++....+..+. -.++|++++..|.......+.+. ..++|+.++++++..- +..
T Consensus 96 ~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V-~~d--- 171 (547)
T 1kp8_A 96 QAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKV-GKE--- 171 (547)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHH-CTT---
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHh-CcC---
Confidence 555665555544443 23455556666554333333332 1355666777776532 211
Q ss_pred CCCccccccccceeEEEecCCCccce-EEEEeEEEeccCCCCC-------CcccccCeeEEEeeccccccccccCCCccc
Q psy14945 140 MPKSVKNAHILTCNISMEYEKSDVCI-ILVKGVVLNHGARHPD-------MPKSVKNAHILTCNISMEYEKSSQGGHQPE 211 (629)
Q Consensus 140 ~~~~~~~~~~~~i~i~~i~Ggs~~dS-~li~Gvv~~~~~~~~~-------m~~~i~n~kIll~~~~Le~~k~~~~~~~~~ 211 (629)
+.++|. +|++++|| ++++|++|++++.||+ |+++++||+|++++++|+.
T Consensus 172 ----------g~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~----------- 228 (547)
T 1kp8_A 172 ----------GVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISN----------- 228 (547)
T ss_dssp ----------SEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECC-----------
T ss_pred ----------CcEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCC-----------
Confidence 224443 89999999 9999999999999986 5667999999999998742
Q ss_pred cccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHH
Q psy14945 212 ISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQS 291 (629)
Q Consensus 212 l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~ 291 (629)
..++. .. +..+. ..+. .+ ++++++|++.+
T Consensus 229 -----------~~~l~-----------~~--------le~i~-------------~~g~----~l----vIi~~~I~~~A 257 (547)
T 1kp8_A 229 -----------IREML-----------PV--------LEAVA-------------KAGK----PL----LIIAEDVEGEA 257 (547)
T ss_dssp -----------GGGTH-----------HH--------HHHHH-------------GGGC----CE----EEEESEECHHH
T ss_pred -----------HHHHH-----------HH--------HHHHH-------------hcCC----CE----EEECCCcCHHH
Confidence 11211 11 34443 2232 11 35688999999
Q ss_pred HHHHHHhC------cEEEe-----ccchhhHHHHHHHhCCccccc-----ccccCcCCCcccceEEEEEEcCeeEEEEee
Q psy14945 292 LDLFAREG------IIALR-----RAKRRNMERLSLACGGTAMNS-----VEGLEPAHLGYAGSVFEHVLGEEKFTFVEE 355 (629)
Q Consensus 292 ~~~la~~~------I~vv~-----~v~~~dl~rIak~tGg~i~~s-----~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~ 355 (629)
+++|..++ |.+++ ++++.+++|||++|||+++++ +++++.+.+|+|+.++ ++++++++|++
T Consensus 258 l~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~---~~~~~~~~i~g 334 (547)
T 1kp8_A 258 LATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVV---INKDTTTIIDG 334 (547)
T ss_dssp HHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEE---ECSSCEEEEEE
T ss_pred HHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEE---EccceEEEEcC
Confidence 99999964 56776 677889999999999999996 7889999999999987 46799999999
Q ss_pred cCCC-----------------------------------ccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccC
Q psy14945 356 CKNP-----------------------------------QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPG 400 (629)
Q Consensus 356 ~~~~-----------------------------------~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~G 400 (629)
|+++ ..|||+|||+++.+++|.+++++||+++++++++++ +|||
T Consensus 335 ~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpG 413 (547)
T 1kp8_A 335 VGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAG 413 (547)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEET
T ss_pred CCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeC
Confidence 8864 569999999999999999999999999999999999 9999
Q ss_pred CChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCC
Q psy14945 401 AGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNP 480 (629)
Q Consensus 401 GG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~ 480 (629)
||++|++++.+|++++. ..+.+|+++++|++||+.||++|++|+|+|+.+++++|+.. +.++|+|+.+|++.|+
T Consensus 414 GGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-----~~~~G~d~~~g~~~dm 487 (547)
T 1kp8_A 414 GGVALIRVASKLADLRG-QNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-----DGNYGYNAATEEYGNM 487 (547)
T ss_dssp TTHHHHHHHHHTTTCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-----CTTEEEETTTTEEEET
T ss_pred CcHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-----CCCEeEeCCCCccccc
Confidence 99999999999998876 77889999999999999999999999999999999999864 2468999999999999
Q ss_pred CcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 481 TSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 481 ~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.+.|||||+.||+++|+.|+++|...+.++
T Consensus 488 ~~~gI~Dp~~vk~~al~~A~~~A~~iL~id 517 (547)
T 1kp8_A 488 IDMGILDPTKVTRSALQYAASVAGLMITTE 517 (547)
T ss_dssp TTTTCEEEHHHHHHHHHHHHHHHHHHHTEE
T ss_pred hhcCceechHhHHHHHHHHHHHHHHHHhHh
Confidence 999999999999999999999887765554
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.6e-42 Score=384.24 Aligned_cols=306 Identities=19% Similarity=0.234 Sum_probs=236.1
Q ss_pred hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccce-EEEEeEEEeccCCCCC-------CcccccCe
Q psy14945 118 KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCI-ILVKGVVLNHGARHPD-------MPKSVKNA 189 (629)
Q Consensus 118 ~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS-~li~Gvv~~~~~~~~~-------m~~~i~n~ 189 (629)
.++|+.++++++..- +.. +.++|. +|+++.|| ++++|++|++++.||+ |+++++||
T Consensus 155 ~~~i~~li~dAv~~V-~~~-------------g~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~ 218 (545)
T 1iok_A 155 ESFIGQQIAEAMQRV-GNE-------------GVITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDA 218 (545)
T ss_dssp CHHHHHHHHHHHHHH-CTT-------------SCCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEE
T ss_pred chhHHHHHHHHHHHh-ccC-------------CeEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCC
Confidence 456888888888742 221 124443 79999999 9999999999999985 66779999
Q ss_pred eEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhc
Q psy14945 190 HILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLK 269 (629)
Q Consensus 190 kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~ 269 (629)
+|++++++|+. . .++. .. +..+. ..+
T Consensus 219 ~Ill~d~~I~~----~------------------~~l~-----------~~--------le~i~-------------~~g 244 (545)
T 1iok_A 219 YILLHEKKLSS----L------------------QPMV-----------PL--------LESVI-------------QSQ 244 (545)
T ss_dssp EEEECSSCBCC----C------------------CC-------------------------------------------C
T ss_pred eEEEEcCCcCC----H------------------HHHH-----------HH--------HHHHH-------------hcC
Confidence 99999998742 1 1110 11 33333 222
Q ss_pred cccccCccccccccccCCCHHHHHHHHHh------CcEEEe-----ccchhhHHHHHHHhCCccccc-----ccccCcCC
Q psy14945 270 MHKFAPDCSTSDRYRTGIDPQSLDLFARE------GIIALR-----RAKRRNMERLSLACGGTAMNS-----VEGLEPAH 333 (629)
Q Consensus 270 ~~~~l~v~~~~~l~~k~i~~~~~~~la~~------~I~vv~-----~v~~~dl~rIak~tGg~i~~s-----~~~l~~~~ 333 (629)
. .+ ++++++|++.++++|..+ +|.+++ ++++.+++|||++|||+++++ +++++++.
T Consensus 245 ~----~l----vIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~ 316 (545)
T 1iok_A 245 K----PL----LIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDM 316 (545)
T ss_dssp C----CC----EEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTT
T ss_pred C----CE----EEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHH
Confidence 2 11 356889999999999985 557776 777889999999999999997 88899999
Q ss_pred CcccceEEEEEEcCeeEEEEeecCCC-----------------------------------ccEEEEecCCCccCHHHHH
Q psy14945 334 LGYAGSVFEHVLGEEKFTFVEECKNP-----------------------------------QSVTILLKGPNKHTLAQTK 378 (629)
Q Consensus 334 lG~~~~v~e~~i~~~~~~~~~~~~~~-----------------------------------~~~TIll~g~~~~~l~e~~ 378 (629)
+|+|+.++ .+++++++|++|+++ ..|||+|||+++.+++|.+
T Consensus 317 LG~a~~v~---~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~k 393 (545)
T 1iok_A 317 LGRAKKVS---INKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERK 393 (545)
T ss_dssp SEEEEEEE---ECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHH
T ss_pred cCcCcEEE---EecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHH
Confidence 99999997 467899999988764 5699999999999999999
Q ss_pred HHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHH
Q psy14945 379 DAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQE 458 (629)
Q Consensus 379 r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~ 458 (629)
|+++||+++++++++++ +|||||++|++++.+|++++. .++.+|+++++|++||+.||++|++|+|+|+.+++++|+.
T Consensus 394 r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 471 (545)
T 1iok_A 394 DRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRE 471 (545)
T ss_dssp HHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 99999999999999999 999999999999999998876 7788999999999999999999999999999999999987
Q ss_pred hhcCCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 459 ACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 459 ~~~~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.| +.++|+|..+|++.|+.+.|||||+.||+++|+.|+++|...+.++
T Consensus 472 ~~----~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id 519 (545)
T 1iok_A 472 SS----DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTE 519 (545)
T ss_dssp CC----STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEE
T ss_pred hc----CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHH
Confidence 65 2468999999999999999999999999999999999888765544
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=6.3e-41 Score=373.22 Aligned_cols=344 Identities=17% Similarity=0.216 Sum_probs=267.5
Q ss_pred hhhhcccccccccCC----CCCCchhhHHHHhHhhhhcccccc--------------hhhHHHHHHHHHhhhcCCCCCCC
Q psy14945 79 QHGIREEGVVLNHGA----RHPDMPKSVKNAHILTCNISMEYE--------------KSDVCIILVKGVVLNHGARHPDM 140 (629)
Q Consensus 79 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~~--------------~~~i~~~~v~~v~~~~~~~~~~~ 140 (629)
+.+++++...+..+. -.++|++++..|.......|.+.+ .+.|+.++++++.. .+..
T Consensus 96 geLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~~~~i~~liadAv~~-V~~d---- 170 (546)
T 3rtk_A 96 QALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAGDQSIGDLIAEAMDK-VGNE---- 170 (546)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHTCHHHHHHHHHHHHH-SCTT----
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCCchHHHHHHHHHHHH-hccC----
Confidence 566666666555544 123566666666643333333322 23455566666552 2210
Q ss_pred CCccccccccceeEEEecCCCccceEEEEeEEEeccCCCC-------CCcccccCeeEEEeeccccccccccCCCccccc
Q psy14945 141 PKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARHP-------DMPKSVKNAHILTCNISMEYEKSSQGGHQPEIS 213 (629)
Q Consensus 141 ~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~~-------~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~ 213 (629)
+.++|.+. ++...||++++|++|++++.|| .||++++||+|++++++++. .
T Consensus 171 ---------gvI~Ve~~-~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~----~-------- 228 (546)
T 3rtk_A 171 ---------GVITVEES-NTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVST----V-------- 228 (546)
T ss_dssp ---------SEEEEECC-SSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECC----S--------
T ss_pred ---------CceEEEec-CCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCC----H--------
Confidence 22444432 2455789999999999999998 46889999999999997631 1
Q ss_pred cccceeeeccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHH
Q psy14945 214 LAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLD 293 (629)
Q Consensus 214 ~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~ 293 (629)
.++. .. +..+. ..+. .+ ++++++|++.+++
T Consensus 229 ----------~~l~-----------~~--------le~I~-------------~~g~----~l----vIi~~~I~~~Al~ 258 (546)
T 3rtk_A 229 ----------KDLL-----------PL--------LEKVI-------------GAGK----PL----LIIAEDVEGEALS 258 (546)
T ss_dssp ----------TTTH-----------HH--------HHHHH-------------TTTC----CE----EEEESEECHHHHH
T ss_pred ----------HHHH-----------HH--------HHHHH-------------hcCC----CE----EEEcCCCCHHHHH
Confidence 1211 11 33443 2222 11 3468999999999
Q ss_pred HHHHhC------cEEEe-----ccchhhHHHHHHHhCCcccc-----cccccCcCCCcccceEEEEEEcCeeEEEEeecC
Q psy14945 294 LFAREG------IIALR-----RAKRRNMERLSLACGGTAMN-----SVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECK 357 (629)
Q Consensus 294 ~la~~~------I~vv~-----~v~~~dl~rIak~tGg~i~~-----s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~ 357 (629)
+|..++ +.+++ +.++.+++|||++|||++++ ++++++++.+|+|+.++ ++++++++|++|+
T Consensus 259 ~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~ 335 (546)
T 3rtk_A 259 TLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAG 335 (546)
T ss_dssp HHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECS
T ss_pred HHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCC
Confidence 999765 45554 23467999999999999999 57888999999999987 6889999999988
Q ss_pred CCc-----------------------------------cEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCC
Q psy14945 358 NPQ-----------------------------------SVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAG 402 (629)
Q Consensus 358 ~~~-----------------------------------~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG 402 (629)
++. .|||++||+++.+++|.+|+++||+++++++++++ +|||||
T Consensus 336 ~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGG 414 (546)
T 3rtk_A 336 DTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGG 414 (546)
T ss_dssp CHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTT
T ss_pred CHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCc
Confidence 643 69999999999999999999999999999999999 999999
Q ss_pred hHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCCCCCCCc
Q psy14945 403 AFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTS 482 (629)
Q Consensus 403 ~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~i~d~~e 482 (629)
++|++++.+|++++ +++.+|+++++|++||+.||++|++|+|+|+.+++++|+..+. .+|+|+.+|++.|+.+
T Consensus 415 a~e~~~s~~L~~~~--~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~-----~~G~d~~~g~~~Dm~~ 487 (546)
T 3rtk_A 415 VTLLQAAPTLDELK--LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPA-----GHGLNAQTGVYEDLLA 487 (546)
T ss_dssp HHHHTTGGGSTTSC--CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSCT-----TEECCSSSCCCEETTT
T ss_pred HHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcC-----CEeEcCCCCcEeeHHH
Confidence 99999999999887 7889999999999999999999999999999999999987421 2799999999999999
Q ss_pred ccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 483 AGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 483 ~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
.|||||+.||+++|+.|+++|...+.++
T Consensus 488 ~gI~dp~~vk~~al~~A~e~A~~iL~id 515 (546)
T 3rtk_A 488 AGVADPVKVTRSALQNAASIAGLFLTTE 515 (546)
T ss_dssp TTCEEEHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCEecHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887766655
No 27
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.4e-40 Score=366.57 Aligned_cols=361 Identities=17% Similarity=0.215 Sum_probs=265.3
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c-----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M-----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~-----~~~ 273 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .++ + +..
T Consensus 60 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 139 (515)
T 3iyg_G 60 VQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDT 139 (515)
T ss_pred cCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHH
Confidence 479999999999999999999999999999999999999999771 000 0 111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccc-----h--hhH---HHHHHHhCCccccccc----ccCcCCC--ccc
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK-----R--RNM---ERLSLACGGTAMNSVE----GLEPAHL--GYA 337 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~-----~--~dl---~rIak~tGg~i~~s~~----~l~~~~l--G~~ 337 (629)
+.-++.+++++|.++.. .++|++.++.++..+. . .|+ ++|.+..|+++.+|.. .+++... +..
T Consensus 140 l~~va~tsl~sK~i~~~-~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~ 218 (515)
T 3iyg_G 140 MLNIINSSITTKVISRW-SSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMR 218 (515)
T ss_pred HHHHHHHHhcCCchhhH-HHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCc
Confidence 22233467777777543 3444455544443332 1 133 6788889999987741 1332221 222
Q ss_pred ceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHH
Q psy14945 338 GSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWH 410 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~ 410 (629)
..+.+.++.+++ |+ .....++.+..+.+. .+++-++.+.+.+..+... .-..|+..+|..+++++
T Consensus 219 -----~~ien~kIll~~-~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~-g~~vIi~~~~I~~~al~- 290 (515)
T 3iyg_G 219 -----RYIKNPRIVLLD-SSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQL-KPDVVITEKGISDLAQH- 290 (515)
T ss_pred -----ceeeeeEEEEEc-ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECCccCHHHHH-
Confidence 235688888886 32 124678888887755 5555556666666555442 22346778888888886
Q ss_pred HHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC---------------------CCC---
Q psy14945 411 ALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE---------------------APG--- 465 (629)
Q Consensus 411 ~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~---------------------~~~--- 465 (629)
||.+++. .+....+..++++|++.... .+..++++...+.+ +++
T Consensus 291 ~L~~~~I~av~~~~k~~leria~~tGa~-----------ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~ 359 (515)
T 3iyg_G 291 YLMRANITAIRRVRKTDNNRIARACGAR-----------IVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKA 359 (515)
T ss_pred HHHHCCceeeccCCHHHHHHHHHHhCCe-----------eeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCe
Confidence 8877664 44556788888888885443 22222222222111 011
Q ss_pred ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q psy14945 466 VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTS 545 (629)
Q Consensus 466 ~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~a 545 (629)
.++-+++.|...+++.+|.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 360 ~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~-------~~~ivpGGGa~e-~~~~~~L~~~~~~~~g~eq~~i~----- 426 (515)
T 3iyg_G 360 CTILLRGASKEILSEVERNLQDAMQVCRNVLL-------DPQLVPGGGASE-MAVAHALTEKSKAMTGVEQWPYR----- 426 (515)
T ss_pred EEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhh-------CCcEEeCCCHHH-HHHHHHHHHHhhccCcHHHHHHH-----
Confidence 12345677889999999999999999999987 999999999999 99999999999999999999999
Q ss_pred hhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHH
Q psy14945 546 LRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 625 (629)
Q Consensus 546 l~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~ 625 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+.++.++|+|+.+|++.||.+.|||||+.||+|+
T Consensus 427 -------------~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~a 493 (515)
T 3iyg_G 427 -------------AVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQT 493 (515)
T ss_pred -------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHH
Confidence 5777888899999999999999999999999976234689999999999999999999999999999
Q ss_pred hhc
Q psy14945 626 INS 628 (629)
Q Consensus 626 i~~ 628 (629)
|++
T Consensus 494 l~~ 496 (515)
T 3iyg_G 494 YKT 496 (515)
T ss_pred HHH
Confidence 974
No 28
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.2e-40 Score=366.62 Aligned_cols=363 Identities=26% Similarity=0.320 Sum_probs=260.3
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c----cccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M----HKFA 274 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~----~~~l 274 (629)
..||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ + +..+
T Consensus 61 v~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L 140 (517)
T 3iyg_Z 61 IQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETL 140 (517)
T ss_pred CcCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHH
Confidence 479999999999999999999999999999999999999999772 000 0 1112
Q ss_pred CccccccccccCCCHHHHHHHHHhCcEEEeccc------hhhHHHHHHHhCCccccccc--c--cCcCCCcccceEEEEE
Q psy14945 275 PDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK------RRNMERLSLACGGTAMNSVE--G--LEPAHLGYAGSVFEHV 344 (629)
Q Consensus 275 ~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~------~~dl~rIak~tGg~i~~s~~--~--l~~~~lG~~~~v~e~~ 344 (629)
..++.+++++|.. ....++|++.++.++..+. ..++++|.+..|++..+|.. . ++.... +.. ...+
T Consensus 141 ~~va~tsl~sKi~-~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~-~p~--m~~~ 216 (517)
T 3iyg_Z 141 IDVARTSLRTKVH-AELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGAR-HPD--MKKR 216 (517)
T ss_pred HHHHHHHhccccc-hhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCC-CCC--cccc
Confidence 2234456666633 4455666665555544332 12567899999999888742 1 332211 111 1224
Q ss_pred EcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhh-------CCC-cccCCChHHHHHH
Q psy14945 345 LGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTID-------DGA-VVPGAGAFEVAAW 409 (629)
Q Consensus 345 i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~-------~~~-VV~GGG~~El~l~ 409 (629)
+.+.++.+++ |+ .....++.+..+.+. ++++-++.+.+.+..+..+.. .|. |+..+|..+++++
T Consensus 217 ien~kIll~~-~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~ 295 (517)
T 3iyg_Z 217 VEDAYILTCN-VSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLD 295 (517)
T ss_pred ccCCeEEEec-ccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHH
Confidence 5678887775 32 124678888887754 223323333333333322221 233 5667899999996
Q ss_pred HHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhh-cC-------------------CCC---
Q psy14945 410 HALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEAC-GE-------------------APG--- 465 (629)
Q Consensus 410 ~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~-~~-------------------~~~--- 465 (629)
||.+++. .+....+..++++|++... ..+..++++...+ .+ +++
T Consensus 296 -~L~~~gI~~v~~v~~~~leria~~tGa-----------~iv~~l~~l~~~~~LG~a~v~e~~ig~~~~~~~~g~~~~~~ 363 (517)
T 3iyg_Z 296 -ALAKEGIIALRRAKRRNMERLTLACGG-----------IALNSLDDLNPDCLLGHAGVYEYTLGEEKFTFIEKCNNPRS 363 (517)
T ss_pred -HHHHCCCEEEEecCHHHHHHHHHHhCC-----------EEecchhhCcccccCCcceEEEEEEcCceEEEEeCCCCchh
Confidence 8877663 3444567788888887443 3333333332222 11 011
Q ss_pred ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q psy14945 466 VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTS 545 (629)
Q Consensus 466 ~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~a 545 (629)
.++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 364 ~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~-------~~~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~----- 430 (517)
T 3iyg_Z 364 VTLLIKGPNKHTLTQIKDAIRDGLRAVKNAID-------DGCVVPGAGAVE-VAMAEALVKYKPSVKGRAQLGVQ----- 430 (517)
T ss_pred heeeecCCcHHHHHHHHHHHHHHHHHHHHHHh-------cceEecCccHHH-HHHHHHHHHHhccCCHHHHHHHH-----
Confidence 23445677889999999999999999999997 999999999999 99999999999989999999999
Q ss_pred hhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHH
Q psy14945 546 LRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 625 (629)
Q Consensus 546 l~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~ 625 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+
T Consensus 431 -------------~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~a 496 (517)
T 3iyg_Z 431 -------------AFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE-SGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQL 496 (517)
T ss_pred -------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCcEEEeCCCCcccchhhccCeecHHHHHHH
Confidence 5777888899999999999999999999999976 56789999999999999999999999999999
Q ss_pred hhc
Q psy14945 626 INS 628 (629)
Q Consensus 626 i~~ 628 (629)
|++
T Consensus 497 l~~ 499 (517)
T 3iyg_Z 497 LHS 499 (517)
T ss_pred HHH
Confidence 975
No 29
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.3e-40 Score=366.45 Aligned_cols=371 Identities=19% Similarity=0.228 Sum_probs=263.3
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH----------------------h-hc-c-----cc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV----------------------N-LK-M-----HK 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~----------------------~-~~-~-----~~ 272 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ . .. + ++
T Consensus 61 v~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e 140 (529)
T 3iyg_A 61 VEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRD 140 (529)
T ss_pred cCChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHH
Confidence 479999999999999999999999999999999999999999771 0 00 0 11
Q ss_pred ccCccccccccccCCCHHHHHHHHHhCcEEEeccc--------hhhH--HHHHHHhCCcccccc--cc--cCcC--CCcc
Q psy14945 273 FAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK--------RRNM--ERLSLACGGTAMNSV--EG--LEPA--HLGY 336 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~--------~~dl--~rIak~tGg~i~~s~--~~--l~~~--~lG~ 336 (629)
.+..++.+++++|.++. ..++|++..+.++..+. ..++ ++|.+..|+++.+|. +. ++.. +-+.
T Consensus 141 ~l~~va~tsl~sK~~~~-~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m 219 (529)
T 3iyg_A 141 CLINAAKTSMSSKVIGI-NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGM 219 (529)
T ss_pred HHHHHHHHHhccCcccc-cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccC
Confidence 12223345666665532 23455555555554442 1233 667888999987763 11 3222 1222
Q ss_pred cceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHH
Q psy14945 337 AGSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAW 409 (629)
Q Consensus 337 ~~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~ 409 (629)
++ .+.+.++.+++ |+ .....++.+.++.+. +.++-++.+...+..+.... -+.|+..+|..+++++
T Consensus 220 ~~-----~ien~kIlll~-~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g-~nvvi~~~~I~d~al~ 292 (529)
T 3iyg_A 220 PK-----RIVNAKIACLD-FSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATG-ANVILTTGGIDDMCLK 292 (529)
T ss_pred Cc-----ccCCceEEEec-CCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCCCCHHHHH
Confidence 32 35588888887 43 124678888887654 33333455555555554332 2458889999999997
Q ss_pred HHHHhhhh-hcCcchHHHHHHHHHHHhhhhHH-H----------HHhcCCChHHHHHHHHHhh---c-CCCC---ceEEE
Q psy14945 410 HALQNYKN-TVKGKSRLGIQAYAEALLIIPKT-I----------AVNSGFDAQDTLVKLQEAC---G-EAPG---VAVGV 470 (629)
Q Consensus 410 ~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-L----------~~NaG~d~~~vl~~L~~~~---~-~~~~---~~~Gi 470 (629)
||.+.+. .+....+..++++|++....+-. + .+..|+.......++-... . ++++ .++-+
T Consensus 293 -~L~~~gI~av~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~l 371 (529)
T 3iyg_A 293 -YFVEAGAMAVRRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVIL 371 (529)
T ss_pred -HHHHcCCceeccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEE
Confidence 7777663 45556788899998885543311 1 1112321100000000000 0 0011 12345
Q ss_pred EeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhh
Q psy14945 471 DVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKV 550 (629)
Q Consensus 471 d~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~ 550 (629)
++.|...+++.+|.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 372 rG~t~~~l~E~er~l~Dal~v~r~~v~-------~~~iVpGGGa~E-~~ls~~L~~~~~~~~g~eq~~i~---------- 433 (529)
T 3iyg_A 372 RGANDFMCDEMERSLHDALCVVKRVLE-------SKSVVPGGGAVE-AALSIYLENYATSMGSREQLAIA---------- 433 (529)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEeCCcHHH-HHHHHHHHHHhhhcCChHHHHHH----------
Confidence 677889999999999999999999997 999999999999 99999999999999999999999
Q ss_pred HHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCC--------ceeeEecCCCcccccccCCccccHHHH
Q psy14945 551 ERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPG--------VAVGVDVNSGEVLNPTSAGIYDNLTVK 622 (629)
Q Consensus 551 ~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~--------~~~Gvd~~~g~i~d~~~~gI~dp~~vK 622 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++ .++|+|+.+|++.||.+.|||||+.||
T Consensus 434 --------~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk 504 (529)
T 3iyg_A 434 --------EFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNE-AQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVK 504 (529)
T ss_pred --------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-cccccccccCceeeeeCCCCCccChhhccCEecHHHH
Confidence 5778888999999999999999999999999976 44 689999999999999999999999999
Q ss_pred HHHhhc
Q psy14945 623 RQIINS 628 (629)
Q Consensus 623 ~~~i~~ 628 (629)
+|+|++
T Consensus 505 ~~al~~ 510 (529)
T 3iyg_A 505 VKSLKF 510 (529)
T ss_pred HHHHHH
Confidence 999975
No 30
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.2e-40 Score=365.13 Aligned_cols=363 Identities=18% Similarity=0.246 Sum_probs=265.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c-c------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M-H------ 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~-~------ 271 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ + +
T Consensus 62 v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 141 (515)
T 3iyg_H 62 VVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVE 141 (515)
T ss_pred CCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHH
Confidence 479999999999999999999999999999999999999999771 000 0 0
Q ss_pred --cccCccccccccccCCCHHHHHHHHHhCcEEEeccchh---hHHHHHHHhCCcccccc--c--ccCcCCC--cccceE
Q psy14945 272 --KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR---NMERLSLACGGTAMNSV--E--GLEPAHL--GYAGSV 340 (629)
Q Consensus 272 --~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~---dl~rIak~tGg~i~~s~--~--~l~~~~l--G~~~~v 340 (629)
..+..++.+++++|.++.. .++|.+..+.++..+.+. ++++|.+..|+++.+|. + .+++... +....
T Consensus 142 ~~~~L~~va~tsl~sK~~s~~-~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~- 219 (515)
T 3iyg_H 142 QRKLLEKCAMTALSSKLISQQ-KAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQ- 219 (515)
T ss_pred HHHHHHHHHHHHhcCCccccc-HHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccC-
Confidence 0012233356666665432 355666666666555433 56678888898887763 1 1332221 11100
Q ss_pred EEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHH
Q psy14945 341 FEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQ 413 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~ 413 (629)
...+.+.++.+++ |+ .....++.+..+.+. .+++.++.+...+..+.... -+.|+...|..+++++ ||.
T Consensus 220 -p~~~en~kIll~~-~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g-~~vvi~~~~I~dla~~-~l~ 295 (515)
T 3iyg_H 220 -PKKYHNPMIALLN-VELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSG-AKVVLSKLPIGDVATQ-YFA 295 (515)
T ss_pred -CccccccEEEEEc-ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEECCcccHHHHH-HHH
Confidence 0135688888886 42 124678888887754 34444455566555554332 3457888899998875 887
Q ss_pred hhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------CC---ceEE
Q psy14945 414 NYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------PG---VAVG 469 (629)
Q Consensus 414 ~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~~---~~~G 469 (629)
+++. .+....+..++++|++.. ...+..++.+...+.+ + ++ .++-
T Consensus 296 ~~gI~~v~~~~k~~leria~~tG-----------a~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~ 364 (515)
T 3iyg_H 296 DRDMFCAGRVPEEDLKRTMMACG-----------GSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTII 364 (515)
T ss_pred HcCCcccccccHHHHHHHHHHhC-----------CEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEE
Confidence 7664 444456778888887744 3333333333222222 0 11 1233
Q ss_pred EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhh
Q psy14945 470 VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTK 549 (629)
Q Consensus 470 id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~ 549 (629)
+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 365 lrG~t~~~l~E~kr~i~DAl~~~r~~v~-------~~~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~--------- 427 (515)
T 3iyg_H 365 LRGGAEQFMEETERSLHDAIMIVRRAIK-------NDSVVAGGGAIE-MELSKYLRDYSRTIPGKQQLLIG--------- 427 (515)
T ss_pred EeCCcHHHHHHHHHHHHHHHHHHHHHhh-------CCCeecCCcHHH-HHHHHHHHHHHhcCChHHHHHHH---------
Confidence 5777889999999999999999999997 899999999999 99999999999999999999999
Q ss_pred hHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 550 VERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 550 ~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 428 ---------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 496 (515)
T 3iyg_H 428 ---------AYAKALEIIPRQLCDNAGFDATNILNKLRARHAQ-GGMWYGVDINTEDIADNFEAFVWEPAMVRINALTA 496 (515)
T ss_pred ---------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhc-cCCCeeEeCCCCcccccHhccCEECHHHHHHHHHH
Confidence 5777888899999999999999999999999976 56789999999999999999999999999999974
No 31
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=8.7e-40 Score=364.05 Aligned_cols=361 Identities=18% Similarity=0.213 Sum_probs=262.9
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c-c------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M-H------ 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~-~------ 271 (629)
.+||.++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ + .
T Consensus 63 v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 142 (513)
T 3iyg_B 63 VDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKF 142 (513)
T ss_pred ccCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccC
Confidence 469999999999999999999999999999999999999999771 000 0 0
Q ss_pred -cccCccccccccccCCCHHHHHHHHHhCcEEEeccchh---hHHHHHHHhCCccccccc----ccCcCCCcccceEEEE
Q psy14945 272 -KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR---NMERLSLACGGTAMNSVE----GLEPAHLGYAGSVFEH 343 (629)
Q Consensus 272 -~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~---dl~rIak~tGg~i~~s~~----~l~~~~lG~~~~v~e~ 343 (629)
+.+..++.+++++|.++. ..++|.+..+.++..+... ++++|.+..|+++.+|.. .++...... ...
T Consensus 143 ~~~l~~va~tslssK~~~~-~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~----m~~ 217 (513)
T 3iyg_B 143 RQDLMNIAGTTLSSKLLTH-HKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN----QPK 217 (513)
T ss_pred HHHHHHHHHhhhccccccc-chHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC----Cce
Confidence 112223334566665432 2334555555555555433 566788888998887731 133322111 223
Q ss_pred EEcCeeEEEEeecCC----C--ccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 344 VLGEEKFTFVEECKN----P--QSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 344 ~i~~~~~~~~~~~~~----~--~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
.+.+.++.+++ |+- + ...++.+..+.+. .+++-++.+...+..+.... -+.++..+|..+++++ ||.++
T Consensus 218 ~~en~kIll~~-~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g-~~vvi~~~~I~~~al~-~L~~~ 294 (513)
T 3iyg_B 218 RIENAKILIAN-TGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHG-INCFINRQLIYNYPEQ-LFGAA 294 (513)
T ss_pred eecCceEEEEc-CCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEcCCccHHHHH-HHHHc
Confidence 46688888886 421 1 3567788777755 33444455555555554332 2457888899999996 88776
Q ss_pred hh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-----------------C---C--ceEEEE
Q psy14945 416 KN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-----------------P---G--VAVGVD 471 (629)
Q Consensus 416 ~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-----------------~---~--~~~Gid 471 (629)
+. .+....+..++++|++. |...+..++++...+.+ + + . .++-++
T Consensus 295 ~I~av~~~~~~~le~ia~~t-----------Ga~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lr 363 (513)
T 3iyg_B 295 GVMAIEHADFVGVERLALVT-----------GGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLR 363 (513)
T ss_pred CceEEecCCHHHHHHHHHHh-----------CCEEecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEec
Confidence 64 44445567788888774 44333333333332222 1 1 1 123346
Q ss_pred eccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhH
Q psy14945 472 VNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVE 551 (629)
Q Consensus 472 ~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~ 551 (629)
+.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 364 G~t~~~l~E~kr~l~DAl~~~r~av~-------~~~iVpGGGa~e-~~~~~~L~~~~~~~~g~~q~~i~----------- 424 (513)
T 3iyg_B 364 GATQQILDEAERSLHDALCVLAQTVK-------DSRTVYGGGCSE-MLMAHAVTQLASRTPGKEAVAME----------- 424 (513)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHh-------CCcEEeCCcHHH-HHHHHHHHHHhhccCcHHHHHHH-----------
Confidence 67888999999999999999999997 899999999999 99999999999989999999999
Q ss_pred HHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 552 RELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 552 ~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 425 -------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 493 (513)
T 3iyg_B 425 -------SYAKALRMLPTIIADNAGYDSADLVAQLRAAHSE-GKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLS 493 (513)
T ss_pred -------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeecCCCCCccchHhccCEecHHHHHHHHHH
Confidence 5777888899999999999999999999999987 66789999999999999999999999999999974
No 32
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-39 Score=360.31 Aligned_cols=359 Identities=18% Similarity=0.189 Sum_probs=258.8
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH----------------------hh-----cc---c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV----------------------NL-----KM---H 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~----------------------~~-----~~---~ 271 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .. .+ +
T Consensus 62 v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~ 141 (512)
T 3iyg_Q 62 VQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDV 141 (512)
T ss_pred cCCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCH
Confidence 479999999999999999999999999999999999999999771 00 00 0
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccch----h--hHHHHHHHhCCcccccc--c--ccCcCCCcccceEE
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR----R--NMERLSLACGGTAMNSV--E--GLEPAHLGYAGSVF 341 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~----~--dl~rIak~tGg~i~~s~--~--~l~~~~lG~~~~v~ 341 (629)
+.+.-++.+++++|..+. .++|.+..+.++..+.+ . +.++|.+..|+++.++. + .+++...+.+.
T Consensus 142 ~~l~~va~tsl~sK~~~~--~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~~~~--- 216 (512)
T 3iyg_Q 142 DEVSSLLHTSVMSKQYGN--EVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEGDVT--- 216 (512)
T ss_pred HHHHHHHHHHhCCCCccc--hHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCCCCc---
Confidence 111123334566654431 34455554444444321 1 45678999999987663 1 24554444333
Q ss_pred EEEEcCeeEEEEeecCC-----CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHh
Q psy14945 342 EHVLGEEKFTFVEECKN-----PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQN 414 (629)
Q Consensus 342 e~~i~~~~~~~~~~~~~-----~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~ 414 (629)
.+.+.++.+++ |+- ....++++..+.+. ..++-++.+.+.+..+.... -+.++.+++..+++++ ||.+
T Consensus 217 --~~~n~kI~ll~-~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g-~~vvi~~~~I~~la~~-~l~k 291 (512)
T 3iyg_Q 217 --SVKDAKIAVYS-CPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTG-ANVVVTGGRVADMALH-YANK 291 (512)
T ss_pred --ccccCceEEEe-cccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEECCCccHHHHH-HHHH
Confidence 34577888776 332 24677888877654 33333444555554443332 3457888888888875 8887
Q ss_pred hhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C--------C-------------C--ceEE
Q psy14945 415 YKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A--------P-------------G--VAVG 469 (629)
Q Consensus 415 ~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~--------~-------------~--~~~G 469 (629)
++. .+....+..++++|++... ..+..++.+...+.+ + | . .++-
T Consensus 292 ~~I~av~~~~~~dle~ia~~tGa-----------~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~ 360 (512)
T 3iyg_Q 292 YNIMLVRLNSKWDLRRLCKTVGA-----------TALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIV 360 (512)
T ss_pred CCeEEEEeCCHHHHHHHHHHhCC-----------EEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEE
Confidence 663 3444456778888877443 333223322222222 0 0 1 1233
Q ss_pred EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhh
Q psy14945 470 VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTK 549 (629)
Q Consensus 470 id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~ 549 (629)
+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 361 lrG~te~~l~E~kr~i~DAl~~~r~a~~-------~~~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~--------- 423 (512)
T 3iyg_Q 361 LRGSTDNLMDDIERAVDDGVNTFKVLTR-------DKRLVPGGGATE-IELAKQITSYGETCPGLEQYAIK--------- 423 (512)
T ss_pred ECCCcHHHHHHHHHHHHHHHHHHHHHHh-------CCCEecCCcHHH-HHHHHHHHHHhccCCcHHHHHHH---------
Confidence 5667888999999999999999999997 999999999999 99999999999989999999999
Q ss_pred hHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCC--cccccccCCccccHHHHHHHhh
Q psy14945 550 VERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSG--EVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 550 ~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g--~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+| ++.||.+.|||||+.||+|+|+
T Consensus 424 ---------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~ 493 (512)
T 3iyg_Q 424 ---------KFAEAFEAIPRALAENSGVKANEVISKLYAVHQE-GNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIK 493 (512)
T ss_pred ---------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHH
Confidence 4777788899999999999999999999999986 677899999965 9999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 494 ~ 494 (512)
T 3iyg_Q 494 L 494 (512)
T ss_pred H
Confidence 4
No 33
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.6e-39 Score=359.44 Aligned_cols=361 Identities=17% Similarity=0.160 Sum_probs=263.6
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c-------c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M-------H 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~-------~ 271 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ + +
T Consensus 61 ~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 140 (515)
T 3iyg_E 61 VDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNT 140 (515)
T ss_pred cCCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCH
Confidence 479999999999999999999999999999999999999999771 000 0 0
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccch-------hhHHHHHHHhCCccccccc----ccCcCCC--cccc
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-------RNMERLSLACGGTAMNSVE----GLEPAHL--GYAG 338 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-------~dl~rIak~tGg~i~~s~~----~l~~~~l--G~~~ 338 (629)
+.+.-++.+++++|.++. ..++|++.++.++..+.. .++++|.+..|+++.+|.. .+++... +.++
T Consensus 141 ~~l~~vA~tsl~sK~i~~-~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~ 219 (515)
T 3iyg_E 141 EPLIQTAKTTLGSKVVNS-CHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPK 219 (515)
T ss_pred HHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccc
Confidence 112223345667776653 456666666666554421 2567888889999887731 1332221 1222
Q ss_pred eEEEEEEcCeeEEEEeecCCC-----ccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 339 SVFEHVLGEEKFTFVEECKNP-----QSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~~~-----~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
.+.+.++++++ |+-. ..+++.+.++.+. +.++-++.+...+..+.... -+.++...|..+.+++ |
T Consensus 220 -----~~~~~kIall~-~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g-~~vvi~~~~I~~~al~-~ 291 (515)
T 3iyg_E 220 -----QVEDAKIAILT-CPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETG-ANLAVCQWGFDDEANH-L 291 (515)
T ss_pred -----cCCCceEEEEc-CccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCCCCHHHHH-H
Confidence 23467887776 4321 2377888887754 33444455555555554332 2467888899999996 7
Q ss_pred HHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C---------------------CC---
Q psy14945 412 LQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A---------------------PG--- 465 (629)
Q Consensus 412 L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~---------------------~~--- 465 (629)
|.+++. .+....+..++++|++... ..+..++++...+.+ + ++
T Consensus 292 L~~~~I~~v~~v~k~~le~ia~~tGa-----------~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~ 360 (515)
T 3iyg_E 292 LLQNDLPAVRWVGGPEIELIAIATGG-----------RIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRA 360 (515)
T ss_pred HHHCCCEEEeccCHHHHHHHHHHhCC-----------EEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCce
Confidence 776654 3344567788888887443 333223333222221 0 11
Q ss_pred ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Q psy14945 466 VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTS 545 (629)
Q Consensus 466 ~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~a 545 (629)
.++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 361 ~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~-------~~~iVpGGGa~e-~~~~~~L~~~~~~~~g~~q~~i~----- 427 (515)
T 3iyg_E 361 VTIFIRGGNKMIIEEAKRSLHDALCVIRNLIR-------DNRVVYGGGAAE-ISCALAVSQEADKCPTLEQYAMR----- 427 (515)
T ss_pred EEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHh-------cCCcCCCCcHHH-HHHHHHHHHHhccCCcHHHHHHH-----
Confidence 12335677888999999999999999999997 999999999999 99999999999999999999999
Q ss_pred hhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHH
Q psy14945 546 LRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQI 625 (629)
Q Consensus 546 l~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~ 625 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+.++.++|+|+.+|++.||.+.|||||+.||+|+
T Consensus 428 -------------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~a 494 (515)
T 3iyg_E 428 -------------AFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQ 494 (515)
T ss_pred -------------HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHH
Confidence 4777888899999999999999999999999975345789999999999999999999999999999
Q ss_pred hhc
Q psy14945 626 INS 628 (629)
Q Consensus 626 i~~ 628 (629)
|++
T Consensus 495 l~~ 497 (515)
T 3iyg_E 495 ISL 497 (515)
T ss_pred HHH
Confidence 974
No 34
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.5e-39 Score=356.07 Aligned_cols=360 Identities=18% Similarity=0.191 Sum_probs=258.8
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-------c--cccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-------K--MHKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-------~--~~~~ 273 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ . .++.
T Consensus 62 v~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 141 (518)
T 3iyg_D 62 VLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRET 141 (518)
T ss_pred cchHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHH
Confidence 479999999999999999999999999999999999999999771 00 0 0111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccch------h--hHHHHHHHhCCcccccc--cc--cCcCCC-cccceE
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR------R--NMERLSLACGGTAMNSV--EG--LEPAHL-GYAGSV 340 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~------~--dl~rIak~tGg~i~~s~--~~--l~~~~l-G~~~~v 340 (629)
+..++.+++++|.++.. .++|.+..+.++..+.. . ++++|.+..|+++.++. +. +++... +...
T Consensus 142 l~~vA~tsl~sK~~~~~-~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~-- 218 (518)
T 3iyg_D 142 LLNSAATSLNSKVVSQY-SSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGIT-- 218 (518)
T ss_pred HHHHhHhhhccccchhh-HHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCc--
Confidence 22344456666655432 44555555555544431 1 34567777898887763 11 333322 3333
Q ss_pred EEEEEcCeeEEEEeecC--C---CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCccc-----CCChHHHHH
Q psy14945 341 FEHVLGEEKFTFVEECK--N---PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVP-----GAGAFEVAA 408 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~--~---~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~-----GGG~~El~l 408 (629)
.+.+.++.+++ |+ . ....++.+..+.+. ++++-++.+...+..+.... -+.++. .+|..++++
T Consensus 219 ---~i~n~kIlll~-~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g-~~lvi~~k~i~~~~I~~~Al 293 (518)
T 3iyg_D 219 ---RVEKAKIGLIQ-FCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTG-CNVLLIQKSILRDALSDLAL 293 (518)
T ss_pred ---cccCceEEEEE-eeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccccccCcCHHHH
Confidence 24578887776 32 1 14567788777643 33333445555555443332 245667 889999999
Q ss_pred HHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C---------------------C-
Q psy14945 409 WHALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A---------------------P- 464 (629)
Q Consensus 409 ~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~---------------------~- 464 (629)
+ ||.+++. .+....+..++++|++.... .+..++++...+.| + .
T Consensus 294 ~-~L~~~~I~av~~~~~~~le~ia~~tGa~-----------ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~ 361 (518)
T 3iyg_D 294 H-FLNKMKIMVVKDIEREDIEFICKTIGTK-----------PVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASP 361 (518)
T ss_pred H-HHHHcCcEEEecCCHHHHHHHHHHhCCE-----------EecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCC
Confidence 7 7777653 34445667788888875433 22222222222111 0 0
Q ss_pred C--ceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q psy14945 465 G--VAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVA 542 (629)
Q Consensus 465 ~--~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~ 542 (629)
. .++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 362 ~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~-------~~~iVpGGGa~e-~~~~~~L~~~~~~~~g~~q~~i~-- 431 (518)
T 3iyg_D 362 GKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVK-------KRALIAGGGAPE-IELALRLTEYSRTLSGMESYCIR-- 431 (518)
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHh-------CCCEeecCcHHH-HHHHHHHHHHhhcCChHHHHHHH--
Confidence 1 12334666788999999999999999999997 999999999999 99999999999999999999999
Q ss_pred HHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHH
Q psy14945 543 RTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVK 622 (629)
Q Consensus 543 ~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK 622 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||
T Consensus 432 ----------------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk 494 (518)
T 3iyg_D 432 ----------------AFADAMEVIPSTLAENAGLNPISTVTELRNRHAQ-GEKTTGINVRKGGISNILEELVVQPLLVS 494 (518)
T ss_pred ----------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-cCCceeEeCCCCcccchhhccCEEcHHHH
Confidence 5777888899999999999999999999999987 56789999999999999999999999999
Q ss_pred HHHhhc
Q psy14945 623 RQIINS 628 (629)
Q Consensus 623 ~~~i~~ 628 (629)
+|+|++
T Consensus 495 ~~al~~ 500 (518)
T 3iyg_D 495 VSALTL 500 (518)
T ss_pred HHHHHH
Confidence 999974
No 35
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4.9e-39 Score=361.10 Aligned_cols=366 Identities=17% Similarity=0.138 Sum_probs=265.7
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c---c----
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M---H---- 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~---~---- 271 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ + +
T Consensus 96 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 175 (562)
T 3p9d_E 96 LDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDEL 175 (562)
T ss_dssp CCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSS
T ss_pred CCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchh
Confidence 479999999999999999999999999999999999999999761 000 0 0
Q ss_pred --cccCccccccccccCCCHHHHHHHHHhCcEEEeccch-------hhHHHHHHHhCCcccccc--c--ccCcCCC--cc
Q psy14945 272 --KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-------RNMERLSLACGGTAMNSV--E--GLEPAHL--GY 336 (629)
Q Consensus 272 --~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-------~dl~rIak~tGg~i~~s~--~--~l~~~~l--G~ 336 (629)
+.+..++.+++++|.++. ..++|++.++.++..+.. .++++|.+..|+++.+|. + .+++... +.
T Consensus 176 ~~e~L~~vA~tSl~sK~i~~-~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m 254 (562)
T 3p9d_E 176 FRDFLLRAAKTSLGSKIVSK-DHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQM 254 (562)
T ss_dssp CHHHHHHHHHHHHSSSTTTT-THHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSC
T ss_pred hHHHHHHHHHHhcCCchhHH-HHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCc
Confidence 112224445677776654 456666666666555432 146778888899988873 1 1333322 33
Q ss_pred cceEEEE-EEcCeeEEEEeecCCC-----ccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHH
Q psy14945 337 AGSVFEH-VLGEEKFTFVEECKNP-----QSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAA 408 (629)
Q Consensus 337 ~~~v~e~-~i~~~~~~~~~~~~~~-----~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l 408 (629)
++.+... ...+.++++++ |+-. ..+++.+.++.++ +.++-++.+...+..+..... +.|+...|..+.++
T Consensus 255 ~~~~~~~~~~~~~kIall~-~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~-~vvI~~~~I~~~Al 332 (562)
T 3p9d_E 255 PKCVLPKEGSDGVKLAILT-CPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA-DVVICQWGFDDEAN 332 (562)
T ss_dssp CC-----TTCSSCEECEEE-SCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC-SCCEECSSCCSHHH
T ss_pred CcccccccccccceEEEec-ccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCHHHH
Confidence 3332100 00478888887 4321 3466888888764 344444556666665554433 46888999999999
Q ss_pred HHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C---------------------C-
Q psy14945 409 WHALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A---------------------P- 464 (629)
Q Consensus 409 ~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~---------------------~- 464 (629)
+ ||.+++. .+....+..++++|++. |...+..++++...+.| + +
T Consensus 333 ~-~L~~~~I~~v~~v~k~~le~ia~~T-----------Ga~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~ 400 (562)
T 3p9d_E 333 H-LLLQNDLPAVRWVGGQELEHIAIST-----------NGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKE 400 (562)
T ss_dssp H-HHHTTTCCCEECCCTTTHHHHHHHH-----------CCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSC
T ss_pred H-HHHHCCCEEEeccCHHHHHHHHHHh-----------CCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCC
Confidence 6 8877664 33334566778877774 44333323222221111 0 1
Q ss_pred --CceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHH
Q psy14945 465 --GVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVA 542 (629)
Q Consensus 465 --~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~ 542 (629)
..++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 401 ~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~-------~g~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~-- 470 (562)
T 3p9d_E 401 TKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVK-------DSRVVYGGGAAE-VTMSLAVSEEADKQRGIDQYAFR-- 470 (562)
T ss_dssp CSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHH-------SCCEEETTTHHH-HHHHHHHHHHHHTTCTTHHHHHH--
T ss_pred CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHh-------CCCcCCCCcHHH-HHHHHHHHHHhccCccHHHHHHH--
Confidence 123446778899999999999999999999998 999999999999 99999999999999999999999
Q ss_pred HHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHH
Q psy14945 543 RTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVK 622 (629)
Q Consensus 543 ~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK 622 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+.++.++|+|+.+|++.||.+.|||||+.||
T Consensus 471 ----------------~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk 534 (562)
T 3p9d_E 471 ----------------GFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGK 534 (562)
T ss_dssp ----------------HHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHH
T ss_pred ----------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHH
Confidence 4677788899999999999999999999999976345789999999999999999999999999
Q ss_pred HHHhhc
Q psy14945 623 RQIINS 628 (629)
Q Consensus 623 ~~~i~~ 628 (629)
+|+|++
T Consensus 535 ~~al~~ 540 (562)
T 3p9d_E 535 KQQILL 540 (562)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999974
No 36
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.1e-39 Score=360.16 Aligned_cols=360 Identities=16% Similarity=0.211 Sum_probs=264.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c--------
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M-------- 270 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~-------- 270 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ +
T Consensus 75 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 154 (550)
T 3p9d_G 75 VVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSG 154 (550)
T ss_dssp CCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC----
T ss_pred CCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchh
Confidence 469999999999999999999999999999999999999999771 000 0
Q ss_pred ccccCccccccccccCCCHHHHHHHHHhCcEEEeccc-h---hhHHHHHHHhCCccccccc----ccCcCC-----Cccc
Q psy14945 271 HKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK-R---RNMERLSLACGGTAMNSVE----GLEPAH-----LGYA 337 (629)
Q Consensus 271 ~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~-~---~dl~rIak~tGg~i~~s~~----~l~~~~-----lG~~ 337 (629)
++.+..++.+++++|.++.. .++|++..+.++..+. + .++++|.++.|+++.+|.. .+++.. .+..
T Consensus 155 ~~~L~~vA~tsl~sK~~~~~-~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~ 233 (550)
T 3p9d_G 155 RELLERCARTAMSSKLIHNN-ADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQP 233 (550)
T ss_dssp --CHHHHHHHHHHHTTTGGG-HHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSC
T ss_pred HHHHHHHHHHhccCcccccc-HhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCc
Confidence 11122233455666665432 4556666666655554 2 1456777888999888731 133222 2333
Q ss_pred ceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHH
Q psy14945 338 GSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWH 410 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~ 410 (629)
++ +.+.++++++ |+ .....++.+..+.+. .++.-++.+.+.+..+.... -+.|+...|..+++++
T Consensus 234 ~~-----~en~kIll~~-~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g-~~vVi~~~~I~dla~~- 305 (550)
T 3p9d_G 234 KK-----FNNPKILSLN-VELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETG-ANIVLSKLPIGDLATQ- 305 (550)
T ss_dssp SC-----CSSCCEEEEC-SCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTT-CSEEEESSCCCHHHHH-
T ss_pred cc-----ccCceEEEec-cccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCCccHHHHH-
Confidence 33 5688888886 43 125688889888855 34444455555555443222 2457888888888885
Q ss_pred HHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C--------CC--------------c
Q psy14945 411 ALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A--------PG--------------V 466 (629)
Q Consensus 411 ~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~--------~~--------------~ 466 (629)
||.+.+. .+....+..++++|++ +|...+..++++...+.+ + +. .
T Consensus 306 ~L~~~gI~~v~~v~k~~lerIa~~-----------tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~ 374 (550)
T 3p9d_G 306 FFADRNIFCAGRVSADDMNRVIQA-----------VGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTC 374 (550)
T ss_dssp TTGGGTCEEEECCCTTHHHHHHHH-----------TCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCC
T ss_pred HHHHcCCccccCcCHHHHHHHHHH-----------hCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCcee
Confidence 8877664 3444456677777777 555444444444433333 1 00 1
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 375 tI~lrG~te~~l~E~kr~l~DAl~~~r~av~-------~g~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~------ 440 (550)
T 3p9d_G 375 TLLLRGGAEQVIAEVERSLHDAIMIVKRALQ-------NKLIVAGGGATE-MEVSKCLRDYSKTIAGKQQMIIN------ 440 (550)
T ss_dssp CCCBCSSSHHHHHHHHHHHHHHHHHHHHHHH-------SCCEEETTTHHH-HHHHHHHHHHHHTCCSTTHHHHH------
T ss_pred EEEEeCCcHHHHHHHHHHHHhHHHHHHHHHh-------cCCcccCCCHHH-HHHHHHHHHHhhcCChHHHHHHH------
Confidence 1224566778899999999999999999998 999999999999 99999999999999999999999
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|
T Consensus 441 ------------~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 507 (550)
T 3p9d_G 441 ------------AFAKALEVIPRQLCENAGFDAIEILNKLRLAHSK-GEKWYGVVFETENIGDNFAKFVWEPALVKINAL 507 (550)
T ss_dssp ------------HHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHH-SCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeeeCCCCcccchHhccCEecHHHHHHHH
Confidence 4677778899999999999999999999999976 567899999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 508 ~~ 509 (550)
T 3p9d_G 508 NS 509 (550)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 37
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.4e-38 Score=356.33 Aligned_cols=361 Identities=17% Similarity=0.266 Sum_probs=259.3
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH------hhcc----------------------ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV------NLKM----------------------HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~------~~~~----------------------~~~ 273 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ ..++ ++.
T Consensus 70 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~ 149 (543)
T 3ruv_A 70 VEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEI 149 (543)
T ss_dssp CCCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHH
T ss_pred CcCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHH
Confidence 469999999999999999999999999999999999999999761 0000 011
Q ss_pred cCccccccccccCC---CHHHHHHHHHhCcEEEeccchh--hHHHHHHHhCCcccccc--c--ccCcCCC--cccceEEE
Q psy14945 274 APDCSTSDRYRTGI---DPQSLDLFAREGIIALRRAKRR--NMERLSLACGGTAMNSV--E--GLEPAHL--GYAGSVFE 342 (629)
Q Consensus 274 l~v~~~~~l~~k~i---~~~~~~~la~~~I~vv~~v~~~--dl~rIak~tGg~i~~s~--~--~l~~~~l--G~~~~v~e 342 (629)
+..++.+++++|.+ ++...++.+++...+-+.-... ++++|.+..|+++.+|. + .+++... +...
T Consensus 150 L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~---- 225 (543)
T 3ruv_A 150 LTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPK---- 225 (543)
T ss_dssp HHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCS----
T ss_pred HHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccccc----
Confidence 11233345555544 2333444444433222210111 23556677788876663 1 1333221 2232
Q ss_pred EEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhh
Q psy14945 343 HVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNY 415 (629)
Q Consensus 343 ~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~ 415 (629)
.+.+.++.+++ |+ ....+++.+..+.+. .+++.++.+...+..+.... -+.|+..++..+.+++ ||.++
T Consensus 226 -~~~n~kIll~~-~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g-~~vvi~~~~I~~~al~-~L~~~ 301 (543)
T 3ruv_A 226 -KVTDAKIALLN-CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASG-ANVLFCQKGIDDLAQH-YLAKE 301 (543)
T ss_dssp -EEEEEEEEEES-SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHT-CSEEEESSCBCHHHHH-HHHHT
T ss_pred -cccCcEEEEEc-ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCCccHHHHH-HHHHc
Confidence 24578888886 32 124678889888854 44444555666655554433 2458889999999986 77776
Q ss_pred hh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------CC---ceEEEE
Q psy14945 416 KN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------PG---VAVGVD 471 (629)
Q Consensus 416 ~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~~---~~~Gid 471 (629)
+. .+....+..++++|++ +|...+..++++...+.+ + ++ .++-++
T Consensus 302 gI~~v~~v~k~~le~ia~~-----------tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lr 370 (543)
T 3ruv_A 302 GIVAARRVKKSDMEKLAKA-----------TGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIR 370 (543)
T ss_dssp TCEEECSCCHHHHHHHHHH-----------HCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEE
T ss_pred CcEEEeeCCHHHHHHHHHH-----------hCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEec
Confidence 63 4555678888888888 444444334433333222 0 11 123456
Q ss_pred eccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhH
Q psy14945 472 VNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVE 551 (629)
Q Consensus 472 ~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~ 551 (629)
+.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 371 G~te~~l~E~kr~l~DAl~~~r~av~-------~g~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~----------- 431 (543)
T 3ruv_A 371 GTTEHVIEEVARAVDDAVGVVGCTIE-------DGRIVSGGGSTE-VELSMKLREYAEGISGREQLAVR----------- 431 (543)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHH-------HCEEEETTTHHH-HHHHHHHHHHHHTCCTTHHHHHH-----------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHh-------cCCeecCCcHHH-HHHHHHHHHHhhcCChHHHHHHH-----------
Confidence 77888999999999999999999998 899999999999 99999999999999999999999
Q ss_pred HHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhh-cCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 552 RELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACG-EAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 552 ~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~-~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++||+.|. + ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 432 -------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 501 (543)
T 3ruv_A 432 -------AFADALEVIPRTLAENAGLDAIEILVKVRAAHASN-GNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQS 501 (543)
T ss_dssp -------HHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTT-CCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhc-CCceeeeeCCCCccccHHHcCCEecHHHHHHHHHH
Confidence 467778889999999999999999999999997 4 56789999999999999999999999999999974
No 38
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.3e-38 Score=356.98 Aligned_cols=360 Identities=19% Similarity=0.294 Sum_probs=268.9
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~----~~~ 273 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ .. ++.
T Consensus 74 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~ 153 (548)
T 1q3q_A 74 LQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEET 153 (548)
T ss_dssp CCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHH
T ss_pred ccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 479999999999999999999999999999999999999999871 00 00 111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccchh---------hHHHHHHHhCCccccccc----ccCcCCC--cccc
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR---------NMERLSLACGGTAMNSVE----GLEPAHL--GYAG 338 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~---------dl~rIak~tGg~i~~s~~----~l~~~~l--G~~~ 338 (629)
+..++.+++++|..+. ..++|++..+.++..+... ++++|.+..|+++.+|.. .+++... +..+
T Consensus 154 l~~va~tsl~sKi~~~-~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~ 232 (548)
T 1q3q_A 154 LLKIAATSITGKNAES-HKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPK 232 (548)
T ss_dssp HHHHHHHHSCSSTTGG-GHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCS
T ss_pred HHHHHHHHhhcccccc-chHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcc
Confidence 2224446777765542 3445555555555444321 366777778999887731 1333222 3333
Q ss_pred eEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 339 SVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
++.+.++.+++ |+ .....++.+..+.+. .+++-++.+...+..+.... -+.|+..+|..+.+++ |
T Consensus 233 -----~ien~kIll~~-~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g-~~lvi~~~~I~~~al~-~ 304 (548)
T 1q3q_A 233 -----RVENAKIALIN-EALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTG-ANVVFVQKGIDDLAQH-Y 304 (548)
T ss_dssp -----EESSEEEEEEC-SCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHT-CCEEEESSCBCHHHHH-H
T ss_pred -----eecCCEEEEEe-cCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhC-cCEEEEcCCcCHHHHH-H
Confidence 35688998887 33 225678888887764 44444455666666664443 3568899999999997 7
Q ss_pred HHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------C---Cce
Q psy14945 412 LQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------P---GVA 467 (629)
Q Consensus 412 L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~---~~~ 467 (629)
|.+++. .+....+..++++|++ +|...+..++.+...+.+ + + ..+
T Consensus 305 L~~~~I~av~~~~k~~le~ia~~-----------tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~T 373 (548)
T 1q3q_A 305 LAKYGIMAVRRVKKSDMEKLAKA-----------TGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVT 373 (548)
T ss_dssp HHHTTCEEECSCCHHHHHHHHHH-----------HCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEE
T ss_pred HHHCCcEEEccCCHHHHHHHHHH-----------hCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEE
Confidence 776664 4556678889998888 455444444444333332 0 0 123
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 374 I~lrG~te~~l~E~er~l~DAl~~~r~a~~-------~~~ivpGGGa~e-~~~~~~L~~~~~~~~g~~q~~i~------- 438 (548)
T 1q3q_A 374 ILIRGGTEHVIDEVERALEDAVKVVKDVME-------DGAVLPAGGAPE-IELAIRLDEYAKQVGGKEALAIE------- 438 (548)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHH-------SCEEEECTTHHH-HHHHHHHHHHHHHHCHHHHHHHH-------
T ss_pred EEECCCChHHHHHHHHHHHHHHHHHHHHHH-------CCCcccCCcHHH-HHHHHHHHHHhhhcCCcHHHHHH-------
Confidence 446777889999999999999999999998 999999999999 99999999999888999999998
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|+
T Consensus 439 -----------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 506 (548)
T 1q3q_A 439 -----------NFADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIK 506 (548)
T ss_dssp -----------HHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHH-HCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-CCCCcceeCCCCCccchhhcCCEecHHHHHHHHH
Confidence 4777788899999999999999999999999975 5568999999999999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 507 ~ 507 (548)
T 1q3q_A 507 S 507 (548)
T ss_dssp H
T ss_pred H
Confidence 4
No 39
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.7e-38 Score=357.08 Aligned_cols=371 Identities=16% Similarity=0.216 Sum_probs=266.6
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHH-HHHH-------------------hh----cc-----cc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIY-IAEV-------------------NL----KM-----HK 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~l-l~~~-------------------~~----~~-----~~ 272 (629)
..||+++|+++.++.|++++|||||||+.++++||++|+.| |+.+ .+ .+ ++
T Consensus 70 ~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e 149 (590)
T 3p9d_C 70 VAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDA 149 (590)
T ss_dssp CCCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTH
T ss_pred CCCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHH
Confidence 47999999999999999999999999999999999999999 7551 00 00 11
Q ss_pred ccCccccccccccCCCHHHHHHHHHhCcEEEeccchh----------------hHHHHHHHhCCccccccc--c--cCcC
Q psy14945 273 FAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR----------------NMERLSLACGGTAMNSVE--G--LEPA 332 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~----------------dl~rIak~tGg~i~~s~~--~--l~~~ 332 (629)
.+.-++.+++++|.++. ..++|++..+.++..+... ++++|.+..|+++.+|.. . +++.
T Consensus 150 ~L~~vA~tslsSK~~~~-~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~ 228 (590)
T 3p9d_C 150 AMKKLIQASIGTKYVIH-WSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKD 228 (590)
T ss_dssp HHHHHHTTTSTTSTTGG-GHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCC
T ss_pred HHHHHHHHHHhcccccc-cHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecc
Confidence 12234445777776542 2445555555555554321 145778888999887731 1 3322
Q ss_pred CC--cccceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCCh
Q psy14945 333 HL--GYAGSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGA 403 (629)
Q Consensus 333 ~l--G~~~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~ 403 (629)
.. +.... +.+.++++++ |+ .....++.+..+.++ .++..++.+.+.+..+... .-..|+...|.
T Consensus 229 ~~~~~m~~~-----~en~kIll~d-~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~-g~~vII~e~~I 301 (590)
T 3p9d_C 229 VVHPKMSRH-----IENPRVVLLD-CPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAV-RPTLVITEKGV 301 (590)
T ss_dssp CSCTTSCSC-----EESCCEECCC-CCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTT-CCSEECCSSCC
T ss_pred cCCCCCcce-----eeeeEEEEEc-ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEecCCc
Confidence 11 22332 4588888886 42 235788889888764 5555556666666555443 22346777789
Q ss_pred HHHHHHHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHH-----HHHhcCC-Ch-HH----------HH------------
Q psy14945 404 FEVAAWHALQNYKN-TVKGKSRLGIQAYAEALLIIPKT-----IAVNSGF-DA-QD----------TL------------ 453 (629)
Q Consensus 404 ~El~l~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-----L~~NaG~-d~-~~----------vl------------ 453 (629)
.+++++ ||.+++. .+....+..++.+|.+....+-. -.+..|. .. ++ .+
T Consensus 302 ~d~Al~-~L~k~~I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~ 380 (590)
T 3p9d_C 302 SDLAQH-YLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGW 380 (590)
T ss_dssp CTHHHH-HHHHTTCCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC----------
T ss_pred CHHHHH-HHHhccceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccc
Confidence 999986 7877664 45556788899999886544311 1122343 11 00 00
Q ss_pred ---------------------------HHHHHhhcC------------C-CCceEEEEeccCCCCCCCcccccchhhHHH
Q psy14945 454 ---------------------------VKLQEACGE------------A-PGVAVGVDVNSGEVLNPTSAGIYDNLTVKR 493 (629)
Q Consensus 454 ---------------------------~~L~~~~~~------------~-~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~ 493 (629)
.+++..... + |-.++-+++.|...+++.++.++|++++.+
T Consensus 381 ~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r 460 (590)
T 3p9d_C 381 SHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVAR 460 (590)
T ss_dssp -----------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000000000 0 113455678899999999999999999999
Q ss_pred HHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHH
Q psy14945 494 QIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATV 573 (629)
Q Consensus 494 ~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~ 573 (629)
++++ ++++|||||++| ++++..|++++.+.++++|++++ +|++|||+||++||+
T Consensus 461 ~av~-------~~~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~------------------~~a~ALe~ip~~La~ 514 (590)
T 3p9d_C 461 NVML-------SPSLSPGGGATE-MAVSVKLAEKAKQLEGIQQWPYQ------------------AVADAMECIPRTLIQ 514 (590)
T ss_dssp HHHH-------CCCEECTTTHHH-HHHHHHHHHHHHHSCSTTHHHHH------------------HHHHHTTHHHHHHHH
T ss_pred HHHh-------cCCEEeCccHHH-HHHHHHHHHHhhcCChHHHHHHH------------------HHHHHHHHHHHHHHH
Confidence 9998 999999999999 99999999999999999999999 466777889999999
Q ss_pred hcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 574 NSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 574 NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 515 NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 568 (590)
T 3p9d_C 515 NAGGDPIRLLSQLRAKHAQ-GNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKT 568 (590)
T ss_dssp TTCSCHHHHHHHHHHHHTT-SCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHhc-CCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHH
Confidence 9999999999999999976 66789999999999999999999999999999974
No 40
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=6e-39 Score=356.24 Aligned_cols=362 Identities=18% Similarity=0.252 Sum_probs=233.1
Q ss_pred eccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc----cc
Q psy14945 221 QIQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM----HK 272 (629)
Q Consensus 221 ~~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~----~~ 272 (629)
..+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ .. ++
T Consensus 23 ~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~ 102 (500)
T 3aq1_B 23 DIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEA 102 (500)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHH
T ss_pred cCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHH
Confidence 3579999999999999999999999999999999999999999771 00 00 11
Q ss_pred ccCccccccccccCCC---HHHHHHHHHhCcEEEecc-ch-----hhHHHHHHHhCCccccccc----ccCcCC--Cccc
Q psy14945 273 FAPDCSTSDRYRTGID---PQSLDLFAREGIIALRRA-KR-----RNMERLSLACGGTAMNSVE----GLEPAH--LGYA 337 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~---~~~~~~la~~~I~vv~~v-~~-----~dl~rIak~tGg~i~~s~~----~l~~~~--lG~~ 337 (629)
.+..++.+++++|..+ +...++.+++...+-+.. .. .++++|.+..|+++.+|.. .+++.. -+..
T Consensus 103 ~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~ 182 (500)
T 3aq1_B 103 ALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMP 182 (500)
T ss_dssp HHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSSTTSC
T ss_pred HHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccceEEEeeeEEeecCCCCCCc
Confidence 1223444677776554 334444444443333220 11 2445777778999876631 133322 2333
Q ss_pred ceEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHH
Q psy14945 338 GSVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWH 410 (629)
Q Consensus 338 ~~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~ 410 (629)
.. +.+.++.+++ |+ ....+++.+..+.+. .+++-++.+...+..+... .-+.|+..+|..+.+++
T Consensus 183 ~~-----i~n~kIll~~-~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~-g~~lvi~~~~I~~~al~- 254 (500)
T 3aq1_B 183 EK-----VENAKILLLS-CPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIAS-GANVVFCQKGIDDMAQY- 254 (500)
T ss_dssp SE-----EEEEEEEEES-SCBCC-------------------------CHHHHHHHHHHTT-CCSEEEESSCBCHHHHH-
T ss_pred cc-----ccCCEEEEEe-CCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHh-CcCEEEECCCcCHHHHH-
Confidence 32 4578888886 33 124677888887754 3344344455555444332 23468899999999996
Q ss_pred HHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------C---Cc
Q psy14945 411 ALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------P---GV 466 (629)
Q Consensus 411 ~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~---~~ 466 (629)
||.+++. .+....+..++++|++ +|...+..++.+...+.+ + + ..
T Consensus 255 ~L~~~~I~av~~~~k~~le~ia~~-----------tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~ 323 (500)
T 3aq1_B 255 YIEKAGIYAVRRVKKSDLKRLSKV-----------TGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNSKAV 323 (500)
T ss_dssp HHHHTTCEEECSCCHHHHHHHHHH-----------HCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTCCCE
T ss_pred HHHHCCEEEEEeCCHHHHHHHHHH-----------hCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEECCCCCceE
Confidence 7777664 4566678899998888 444444333333222222 0 0 12
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 324 TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~-------~~~iVpGGGa~e-~~~~~~L~~~~~~~~g~~q~~i~------ 389 (500)
T 3aq1_B 324 TVLLHGGTEHVVDSLDHALNDALHVVGVVIE-------DGKVVVGGGSSE-VELSLRLSEYASTLKGREQLAVS------ 389 (500)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHHH-------HSEEEETTTHHH-HHHHHHHHHHHHTCCSHHHHHHH------
T ss_pred EEEecCCcHHHHHHHHHHHHHHHHHHHHHHH-------CCCCCCCCcHHH-HHHHHHHHHHhhhcCchHHHHHH------
Confidence 3345777889999999999999999999998 999999999999 99999999999889999999999
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|
T Consensus 390 ------------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 456 (500)
T 3aq1_B 390 ------------KFAEALEVIPVALAENAGLDPIDIMVELRSQHEK-GNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAI 456 (500)
T ss_dssp ------------HHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHT-TCTTEEECTTTCCEEETTTTTCEEEHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcC-CCCCeeEeCCCCCccchHhcCCCCCHHHHHHHH
Confidence 4777788899999999999999999999999976 567899999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 457 ~~ 458 (500)
T 3aq1_B 457 NA 458 (500)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 41
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.7e-38 Score=355.84 Aligned_cols=360 Identities=20% Similarity=0.257 Sum_probs=268.2
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh----cc---ccccC
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL----KM---HKFAP 275 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~----~~---~~~l~ 275 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ .+ ++.+.
T Consensus 73 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~~~~~~~l~ 152 (545)
T 1a6d_A 73 VEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEKSTDDATLR 152 (545)
T ss_dssp CCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEECCCHHHHH
T ss_pred ccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 479999999999999999999999999999999999999999882 00 00 01122
Q ss_pred ccccccccccCCCHHHHHHHHHhCcEEEeccchh---------hHHHHHHHhCCccccccc----ccCcCCC--cccceE
Q psy14945 276 DCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR---------NMERLSLACGGTAMNSVE----GLEPAHL--GYAGSV 340 (629)
Q Consensus 276 v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~---------dl~rIak~tGg~i~~s~~----~l~~~~l--G~~~~v 340 (629)
.++.+++++|..+. ..++|.+..+.++..+... ++++|.+..|+++.+|.. .+++... +....
T Consensus 153 ~va~tsl~sKi~~~-~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~- 230 (545)
T 1a6d_A 153 KIALTALSGKNTGL-SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDV- 230 (545)
T ss_dssp HHHHHHTTTSSCCS-THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSE-
T ss_pred HHHHHHHhcccccc-cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcce-
Confidence 23345666665432 2344444444444444221 466777788999887731 1333322 33333
Q ss_pred EEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHH
Q psy14945 341 FEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQ 413 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~ 413 (629)
+.+.++.+++ |+ .....++.+..+.+. .+++-++.+...+..+.... -+.|+..++..+.+++ ||.
T Consensus 231 ----ien~kIll~~-~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g-~~lvi~~~~I~~~al~-~L~ 303 (545)
T 1a6d_A 231 ----VKNAKIALID-SALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSG-ANVVLCQKGIDDVAQH-YLA 303 (545)
T ss_dssp ----EEEEEEEEEC-SCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEESSCBCHHHHH-HHH
T ss_pred ----ecCCEEEEEe-cCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEECCCccHHHHH-HHH
Confidence 4578888886 33 225789999998865 44554555666666554433 3568899999999997 776
Q ss_pred hhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------C---CceEE
Q psy14945 414 NYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------P---GVAVG 469 (629)
Q Consensus 414 ~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~---~~~~G 469 (629)
+++. .+....+..++++|++ +|...+..++.+...+.+ + + ..++-
T Consensus 304 ~~~I~av~~~~k~~le~ia~~-----------tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~ 372 (545)
T 1a6d_A 304 KEGIYAVRRVKKSDMEKLAKA-----------TGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSIL 372 (545)
T ss_dssp HHTCEEECSCCHHHHHHHHHH-----------HCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEE
T ss_pred HCCeeEeccCCHHHHHHHHHH-----------hCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEE
Confidence 6664 4566678889998888 455444444444333332 0 0 11233
Q ss_pred EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhh
Q psy14945 470 VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTK 549 (629)
Q Consensus 470 id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~ 549 (629)
+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 373 lrG~te~~l~E~kr~l~DAl~~~r~a~~-------~g~iVpGGGa~e-~~~~~~L~~~~~~~~g~~q~~i~--------- 435 (545)
T 1a6d_A 373 IRGGTDHVVSEVERALNDAIRVVAITKE-------DGKFLWGGGAVE-AELAMRLAKYANSVGGREQLAIE--------- 435 (545)
T ss_dssp ECCSSSTTHHHHHHHHHHHHHHHHHHHH-------HCEEEETTTHHH-HHHHHHHHHHHHTSCHHHHHHHH---------
T ss_pred EcCCCHHHHHHHHHHHHHHHHHHHHHHh-------CCCEEeCcCHHH-HHHHHHHHHHhhccCccHHHHHH---------
Confidence 5677889999999999999999999998 999999999999 99999999999889999999999
Q ss_pred hHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 550 VERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 550 ~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 436 ---------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 504 (545)
T 1a6d_A 436 ---------AFAKALEIIPRTLAENAGIDPINTLIKLKADDEK-GRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALES 504 (545)
T ss_dssp ---------HHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHT-TCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-CCCCcceecccCccccchhcCccccHHHHHHHHHH
Confidence 4677788899999999999999999999999976 56789999999999999999999999999999974
No 42
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4e-39 Score=360.89 Aligned_cols=360 Identities=18% Similarity=0.265 Sum_probs=259.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c-----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M-----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~-----~~~ 273 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ + +..
T Consensus 81 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~ 160 (553)
T 3ko1_A 81 LQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDL 160 (553)
T ss_dssp CCSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHH
T ss_pred ccChhHHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHH
Confidence 479999999999999999999999999999999999999999772 000 0 111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccch-------h--hHHHHHHHhCCcccccc--c--ccCcCCC--cccc
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-------R--NMERLSLACGGTAMNSV--E--GLEPAHL--GYAG 338 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-------~--dl~rIak~tGg~i~~s~--~--~l~~~~l--G~~~ 338 (629)
+..++.+++++|.++. ..++|++..+.++..+.. . ++++|.+..|+++.+|. + .+++... +...
T Consensus 161 L~~vA~tsl~sK~~~~-~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~ 239 (553)
T 3ko1_A 161 LRKIAMTSLSSKAVAG-AREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPK 239 (553)
T ss_dssp HHHHHHHHHTTSSCCT-THHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCS
T ss_pred HHHHHHHHhhHHhhhh-HHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCcc
Confidence 2223335666665533 234444444444443321 1 33556777888877663 1 1332221 2222
Q ss_pred eEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 339 SVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
.+.+.++.+++ |+ .....++.+..+.+. .+++-++.+...+..+.... -+.|+..+|..+++++ |
T Consensus 240 -----~ien~kIll~d-~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g-~~vvI~~~~I~~~al~-~ 311 (553)
T 3ko1_A 240 -----RLENAKIALID-ASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATG-ANVIICQKGIDEVAQS-Y 311 (553)
T ss_dssp -----CCBSCEEEEEC-SCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTC-CSEEECSSCBCSHHHH-H
T ss_pred -----ccccceEEEec-CcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhc-ceEEEeccChHHHHHH-H
Confidence 24588888886 32 123566777776643 33444455555555443332 2457889999999986 7
Q ss_pred HHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------CC---ce
Q psy14945 412 LQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------PG---VA 467 (629)
Q Consensus 412 L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~~---~~ 467 (629)
|.+++. .+....+..++++|++ +|...+..++++...+.+ + ++ .+
T Consensus 312 L~~~gI~~v~~v~k~~leria~~-----------tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~T 380 (553)
T 3ko1_A 312 LAKKGVLAVRRAKKSDLEKLARA-----------TGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSIS 380 (553)
T ss_dssp HHHHTCEEECCCCHHHHHHHHTT-----------TTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEE
T ss_pred HHhcchhhhhhhhhhhHHHHHHh-----------hCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEE
Confidence 777663 4555678888888877 455444434433322222 1 11 12
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 381 I~lrG~te~~l~E~er~l~DAl~~~r~av~-------~g~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~------- 445 (553)
T 3ko1_A 381 ILIRGGLERLVDETERALRDALGTVADVIK-------DGRAIAGGGAVE-IEIAKKLRKYAPQVGGKEQLAVE------- 445 (553)
T ss_dssp EEECCSSTTHHHHHHHHHHHHHHHHHHHHH-------HCEEEETTTHHH-HHHHHHHHHHHHHHCSHHHHHHH-------
T ss_pred EeeeccHHHHHHHHHHHHHHHHHHHHHHhh-------cCceecCCceeE-eHHHHHHHHhccccCChhHhHHH-------
Confidence 345677889999999999999999999998 999999999999 99999999999889999999999
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCC-ceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPG-VAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~-~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++ .++|+|+.+|++.||.+.|||||+.||+|+|
T Consensus 446 -----------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 513 (553)
T 3ko1_A 446 -----------AYANALESLVSILIENAGFDPIDLLMKLRSTHEN-ENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAI 513 (553)
T ss_dssp -----------HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCS-GGGTTEEEETTTTEEEESGGGSCEEETTHHHHHH
T ss_pred -----------HHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhC-cCCceEeEEeecCCchHHHHhCccchhhhhhhhh
Confidence 4777788899999999999999999999999976 44 6899999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 514 ~~ 515 (553)
T 3ko1_A 514 KA 515 (553)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 43
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.7e-38 Score=355.85 Aligned_cols=360 Identities=19% Similarity=0.275 Sum_probs=266.2
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~----~~~ 273 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.|++.+ .+ .. ++.
T Consensus 72 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 151 (543)
T 1a6d_B 72 VEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKAL 151 (543)
T ss_dssp CCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHH
T ss_pred ccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 479999999999999999999999999999999999999999872 00 00 111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccch-------h--hHHHHHHHhCCccccccc----ccCcCCC--cccc
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-------R--NMERLSLACGGTAMNSVE----GLEPAHL--GYAG 338 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-------~--dl~rIak~tGg~i~~s~~----~l~~~~l--G~~~ 338 (629)
+..++.+++++|..+. ..++|++..+.++..+.. . ++++|.+..|+++.+|.. .+++... +..+
T Consensus 152 l~~va~tsl~sKi~~~-~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~ 230 (543)
T 1a6d_B 152 LLKMAQTSLNSKSASV-AKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPD 230 (543)
T ss_dssp HHHHHHHHHTTSGGGG-GHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCS
T ss_pred HHHHHHHHhccccccc-cHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcc
Confidence 2223335666664432 233444444444433321 1 346677778999887731 1333322 3343
Q ss_pred eEEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHH
Q psy14945 339 SVFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHA 411 (629)
Q Consensus 339 ~v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~ 411 (629)
. +.+.++.+++ |+ .....++.+..+.+. ++++-++.+...+..+.... -+.|+..+|..+.+++ |
T Consensus 231 ~-----ien~kIll~~-~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g-~~lvi~~~~I~~~al~-~ 302 (543)
T 1a6d_B 231 V-----VKDAKIALLD-APLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVG-ANVVITQKGIDDMAQH-Y 302 (543)
T ss_dssp E-----EEEEEEEEES-SCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEESSCBCHHHHH-H
T ss_pred e-----ecCCeEEEEe-cccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEECCCcCHHHHH-H
Confidence 3 4578888886 33 225788999988865 44554556666666554433 3468899999999997 7
Q ss_pred HHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------C---Cce
Q psy14945 412 LQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-------------------P---GVA 467 (629)
Q Consensus 412 L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-------------------~---~~~ 467 (629)
|.+++. .+....+..++++|++ +|...+..++.+...+.+ + + ..+
T Consensus 303 L~~~~I~av~~v~k~~le~ia~~-----------tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~T 371 (543)
T 1a6d_B 303 LSRAGIYAVRRVKKSDMDKLAKA-----------TGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVS 371 (543)
T ss_dssp HHHTTCEEECSCCHHHHHHHHHH-----------HTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEE
T ss_pred HHHCCeeEeccCCHHHHHHHHHH-----------hCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEE
Confidence 777664 5566678899998888 455444444444333332 0 0 123
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 372 I~lrG~t~~~l~E~er~l~DAl~~~r~a~~-------~~~ivpGGGa~e-~~~s~~L~~~~~~~~g~~q~~i~------- 436 (543)
T 1a6d_B 372 ILVRGETEHVVDEMERSITDSLHVVASALE-------DGAYAAGGGATA-AEIAFRLRSYAQKIGGRQQLAIE------- 436 (543)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHHHHH-------HCEEEETTTHHH-HHHHHHHHHHHHHTCSSHHHHHH-------
T ss_pred EEecCCCHHHHHHHHHHHHHHHHHHHHHHH-------CCCccCCccHHH-HHHHHHHHHHhhhcCChHHHHHH-------
Confidence 345777888999999999999999999998 999999999999 99999999999889999999999
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++||++||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|+
T Consensus 437 -----------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 504 (543)
T 1a6d_B 437 -----------KFADAIEEIPRALAENAGLDPIDILLKLRAEHAK-GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIE 504 (543)
T ss_dssp -----------HHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHT-TCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhC-CCCCeeEeCCCCcccchhhcCceecHHHHHHHHH
Confidence 4677788899999999999999999999999976 5678999999999999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 505 ~ 505 (543)
T 1a6d_B 505 S 505 (543)
T ss_dssp H
T ss_pred H
Confidence 4
No 44
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=8e-39 Score=359.82 Aligned_cols=376 Identities=17% Similarity=0.192 Sum_probs=263.4
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc-----c------c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK-----M------H 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~-----~------~ 271 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ . +
T Consensus 77 v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~ 156 (568)
T 3p9d_H 77 IVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDK 156 (568)
T ss_dssp CCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTT
T ss_pred cCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCH
Confidence 479999999999999999999999999999999999999999872 000 0 1
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccch----------h--hHHHHHHHhCCcccccc--c--ccCcCCCc
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR----------R--NMERLSLACGGTAMNSV--E--GLEPAHLG 335 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~----------~--dl~rIak~tGg~i~~s~--~--~l~~~~lG 335 (629)
+.+.-++.+++++|.++.. ++|.+..+.++..+.. . ++++|.+..|+++.+|. + .+++...+
T Consensus 157 ~~l~~va~tsl~sK~~~~~--~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~~ 234 (568)
T 3p9d_H 157 NELLKMIKPVISSKKYGSE--DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPEG 234 (568)
T ss_dssp HHHHHHHHHHHTTTSTTCH--HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBSS
T ss_pred HHHHHHHHHHhhccCcchH--HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecccC
Confidence 1111233356666654432 4555555555444422 1 25667778899998873 1 24444444
Q ss_pred ccceEEEEEEcCeeEEEEeecC----C-CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHH
Q psy14945 336 YAGSVFEHVLGEEKFTFVEECK----N-PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAA 408 (629)
Q Consensus 336 ~~~~v~e~~i~~~~~~~~~~~~----~-~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l 408 (629)
....++ ..++.++++++ |+ . ....++.+..+.+. ++++.++.+...+..+.... -+.|+..+|..++++
T Consensus 235 m~~~i~--~~~n~kIlll~-~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g-~~vvi~~~~I~~~al 310 (568)
T 3p9d_H 235 HVKSLS--EDKKHKVAVFT-CPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMG-VECIVAGAGVGELAL 310 (568)
T ss_dssp GGGSCC--CCSSCEEEEEC-SCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSCCCHHHH
T ss_pred CcEEEe--cCCcceEEEEc-cCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEECCCcChHHH
Confidence 443322 01288888886 33 1 14678888877755 33444455666655554332 345888999999999
Q ss_pred HHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHH-----HHHhcCCChHHHHHHHHHh---hc-CCC-----CceEEEEec
Q psy14945 409 WHALQNYKN-TVKGKSRLGIQAYAEALLIIPKT-----IAVNSGFDAQDTLVKLQEA---CG-EAP-----GVAVGVDVN 473 (629)
Q Consensus 409 ~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~-----L~~NaG~d~~~vl~~L~~~---~~-~~~-----~~~~Gid~~ 473 (629)
+ ||.+++. .+....+..++++|++....+-. -.+..|+.......++-.. .. +++ ..++-+++.
T Consensus 311 ~-~L~~~gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~ 389 (568)
T 3p9d_H 311 H-YLNRYGILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGA 389 (568)
T ss_dssp H-HHHHHTCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEES
T ss_pred H-HHHHCCeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCC
Confidence 7 7877664 44555688899998885443211 0111222100000000000 00 001 124556788
Q ss_pred cCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHH
Q psy14945 474 SGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERE 553 (629)
Q Consensus 474 t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 553 (629)
|...+++.++.++|++++.+++++. .++++|||||++| ++++..|++++.+.++++|++++
T Consensus 390 t~~~l~E~er~i~DAL~vvr~av~~-----~d~~iVpGGGa~E-~~ls~~L~~~a~~~~g~eq~~i~------------- 450 (568)
T 3p9d_H 390 TQNNLDDIERAIDDGVAAVKGLMKP-----SGGKLLPGAGATE-IELISRITKYGERTPGLLQLAIK------------- 450 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTST-----TCCCCCCTTTHHH-HHHHHHHHHHHHTCCSTHHHHHH-------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcc-----cCCeEEeCCcHHH-HHHHHHHHHHhccCCcHHHHHHH-------------
Confidence 8899999999999999999988721 1699999999999 99999999999999999999999
Q ss_pred HHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhc-------CCCceeeEecCCCc---ccccccCCccccHHHHH
Q psy14945 554 LADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGE-------APGVAVGVDVNSGE---VLNPTSAGIYDNLTVKR 623 (629)
Q Consensus 554 ~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~-------~~~~~~Gvd~~~g~---i~d~~~~gI~dp~~vK~ 623 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ +++.++|||+.+|+ +.||.+.|||||+.||+
T Consensus 451 -----~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~ 525 (568)
T 3p9d_H 451 -----QFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKK 525 (568)
T ss_dssp -----HHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHH
Confidence 5778888999999999999999999999999954 13568999999997 99999999999999999
Q ss_pred HHhhc
Q psy14945 624 QIINS 628 (629)
Q Consensus 624 ~~i~~ 628 (629)
|+|++
T Consensus 526 ~al~~ 530 (568)
T 3p9d_H 526 FAINV 530 (568)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 99985
No 45
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.5e-38 Score=353.17 Aligned_cols=371 Identities=17% Similarity=0.195 Sum_probs=263.9
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hhc----c-----ccc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NLK----M-----HKF 273 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~~----~-----~~~ 273 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .++ + ++.
T Consensus 70 v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~ 149 (528)
T 3p9d_D 70 ILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQ 149 (528)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHH
T ss_pred cCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHH
Confidence 479999999999999999999999999999999999999999761 000 0 111
Q ss_pred cCccccccccccCCCHHHHHHHHHhCcEEEeccch-------hhHHHHHHHhCCcccccc--c--ccCcCCC---cccce
Q psy14945 274 APDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-------RNMERLSLACGGTAMNSV--E--GLEPAHL---GYAGS 339 (629)
Q Consensus 274 l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-------~dl~rIak~tGg~i~~s~--~--~l~~~~l---G~~~~ 339 (629)
+..++.+++++|.++. ..++|++..+.++..+.. .+.++|.+..|+++.+|. + .+++... +...
T Consensus 150 l~~va~tsl~sK~~~~-~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~- 227 (528)
T 3p9d_D 150 LVRAASTSLSSKIVSQ-YSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPT- 227 (528)
T ss_dssp HHHHHHHHSCSSSCST-THHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCS-
T ss_pred HHHHHHHHhcCCccch-hHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcc-
Confidence 2223345677776642 234455555555544432 145678888899988763 1 1333221 1222
Q ss_pred EEEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCCh-----HHHH
Q psy14945 340 VFEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGA-----FEVA 407 (629)
Q Consensus 340 v~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~-----~El~ 407 (629)
.+.+.++.+++ |+ .....++.+..+.++ .+++-++.+...+..+.... -+.++..+|. .+++
T Consensus 228 ----~ien~kIll~~-~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g-~~vvi~~~~I~~~a~~~~a 301 (528)
T 3p9d_D 228 ----RKEKAKIGLIQ-FQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAK-CNVLLIQKSILRDAVNDLA 301 (528)
T ss_dssp ----EESSEEEEEEC-CCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEESSCSCTTSCSCHH
T ss_pred ----cccCceEEEEe-ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCCcccccCCHHH
Confidence 35688988887 33 124789999988854 34444455666655554332 3567888899 9999
Q ss_pred HHHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHH-----HHhcCCCh-HHHH-------HHHHHhh--cCCCCceEEEE
Q psy14945 408 AWHALQNYKN-TVKGKSRLGIQAYAEALLIIPKTI-----AVNSGFDA-QDTL-------VKLQEAC--GEAPGVAVGVD 471 (629)
Q Consensus 408 l~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L-----~~NaG~d~-~~vl-------~~L~~~~--~~~~~~~~Gid 471 (629)
++ ||.+.+. .+....+..++++|++....+-.- .+..|... +... ..++... ...+..++-++
T Consensus 302 l~-~L~~~~I~av~~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lr 380 (528)
T 3p9d_D 302 LH-FLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIR 380 (528)
T ss_dssp HH-HHTTTSCCEEECCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECC
T ss_pred HH-HHHHcCcEEEEeCCHHHHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEc
Confidence 96 7776653 444556788899888855433110 11112100 0000 0000000 00011234456
Q ss_pred eccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhH
Q psy14945 472 VNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVE 551 (629)
Q Consensus 472 ~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~ 551 (629)
+.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 381 G~te~~l~E~kr~i~DAl~~~r~av~-------~~~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~----------- 441 (528)
T 3p9d_D 381 GANNMIIDETERSLHDALCVIRCLVK-------ERGLIAGGGAPE-IEISRRLSKEARSMEGVQAFIWQ----------- 441 (528)
T ss_dssp CSSTTHHHHHHHHHTTTHHHHHHHHH-------SSCEEETTTHHH-HHHHHHHHHCCTTSCHHHHTTHH-----------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHh-------cCCccCCCCHHH-HHHHHHHHHHhhccChHHHHHHH-----------
Confidence 77889999999999999999999998 999999999999 99999999999889999999999
Q ss_pred HHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 552 RELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 552 ~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 442 -------~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 510 (528)
T 3p9d_D 442 -------EFASALEVIPTTLAENAGLNSIKVVTELRSKHEN-GELNDGISVRRSGTTNTYEEHILQPVLVSTSAITL 510 (528)
T ss_dssp -------HHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCS-SSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-cCCccceecCCCCccchHhccCeecHHHHHHHHHH
Confidence 4677778899999999999999999999999976 66789999999999999999999999999999974
No 46
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.1e-37 Score=350.06 Aligned_cols=360 Identities=17% Similarity=0.210 Sum_probs=260.8
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH----------------------h-hc-c-----cc
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV----------------------N-LK-M-----HK 272 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~----------------------~-~~-~-----~~ 272 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ . .. + ++
T Consensus 75 v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e 154 (559)
T 3p9d_A 75 VQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKE 154 (559)
T ss_dssp CCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CT
T ss_pred CCCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHH
Confidence 469999999999999999999999999999999999999999761 1 10 0 11
Q ss_pred ccCccccccccccCCCHHHHHHHHHhCcEEEeccc--------hh--hHHHHHHHhCCccccccc----ccCcCC--Ccc
Q psy14945 273 FAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAK--------RR--NMERLSLACGGTAMNSVE----GLEPAH--LGY 336 (629)
Q Consensus 273 ~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~--------~~--dl~rIak~tGg~i~~s~~----~l~~~~--lG~ 336 (629)
.+..++.+++++|.++. ..++|++..+.++..+. .. +.++|.+..|+++.+|.. .+++.. .+.
T Consensus 155 ~L~~vA~tsl~sK~~~~-~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m 233 (559)
T 3p9d_A 155 TLINIAKTSMSSKIIGA-DSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAM 233 (559)
T ss_dssp THHHHHHHTTSSSGGGT-THHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTS
T ss_pred HHHHHHHHHhccCcccc-hhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCc
Confidence 22223445666665542 23344444444443332 11 236677778998887631 133222 123
Q ss_pred cceEEEEEEc--CeeEEEEeecCC-----CccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHH
Q psy14945 337 AGSVFEHVLG--EEKFTFVEECKN-----PQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVA 407 (629)
Q Consensus 337 ~~~v~e~~i~--~~~~~~~~~~~~-----~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~ 407 (629)
+. .+. +.++++++ |+- ....++.+..+.+. +.++-++.+...+..+.... -+.|+..+|..+.+
T Consensus 234 ~~-----~ie~~n~kIll~~-~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g-~~lvI~~~~I~~~a 306 (559)
T 3p9d_A 234 PK-----RIAGGNVKIACLD-LNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAG-AQVVLTTKGIDDLC 306 (559)
T ss_dssp CS-----EECSSSBCEEEET-TCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTC-CSEEEESSCCCGGG
T ss_pred ce-----eeccCCceEEEEe-ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhC-CCEEEEcCCCCHHH
Confidence 32 245 88888886 431 24688999888764 34444455565555554332 24588899999999
Q ss_pred HHHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHH------HHHHHhhcCC-----------------
Q psy14945 408 AWHALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTL------VKLQEACGEA----------------- 463 (629)
Q Consensus 408 l~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl------~~L~~~~~~~----------------- 463 (629)
++ ||.+++. .+....+..++++|++.. ...+..+ +++...+.+.
T Consensus 307 l~-~L~~~~I~av~~~~k~~le~ia~~TG-----------a~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~ 374 (559)
T 3p9d_A 307 LK-EFVEAKIMGVRRCKKEDLRRIARATG-----------ATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILI 374 (559)
T ss_dssp TH-HHHHTTCEEESSCCHHHHHHHHHHSS-----------CCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECE
T ss_pred HH-HHHHcCCceEccCCHHHHHHHHHHhC-----------CEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEE
Confidence 97 7776664 455667888999888844 3322222 1222222210
Q ss_pred ------CCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHH
Q psy14945 464 ------PGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREI 537 (629)
Q Consensus 464 ------~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~ 537 (629)
+..++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|+
T Consensus 375 ~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~-------~g~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~ 446 (559)
T 3p9d_A 375 KGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLE-------SGNVVPGGGCVE-AALNIYLDNFATTVGSREQL 446 (559)
T ss_dssp EEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHT-------SSCEECTTTTHH-HHHHHHHHHHHTTSCTTHHH
T ss_pred EcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhh-------cCCEEeCccHHH-HHHHHHHHHHhcccChHHHH
Confidence 1123445777888999999999999999999997 999999999999 99999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCc------------eeeEecCCC
Q psy14945 538 LLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGV------------AVGVDVNSG 605 (629)
Q Consensus 538 ~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~------------~~Gvd~~~g 605 (629)
+++ +|++|||+||++||+|||+|+.+++++||+.|.+ ++. ++|+|+.+|
T Consensus 447 ~i~------------------~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~~~~~~~~~~~~~G~d~~~g 507 (559)
T 3p9d_A 447 AIA------------------EFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAA-SQMAKPEDVKRRSYRNYGLDLIRG 507 (559)
T ss_dssp HHH------------------HHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHT-TSCCC----CCCCCCCEEECTTSS
T ss_pred HHH------------------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhc-cccccccccccccccceeEECCCC
Confidence 999 4677788899999999999999999999999976 443 799999999
Q ss_pred cccccccCCccccHHHHHHHhhc
Q psy14945 606 EVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 606 ~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
++.||.+.|||||+.||+|+|++
T Consensus 508 ~~~dm~~~gI~dp~~vk~~al~~ 530 (559)
T 3p9d_A 508 KIVDEIHAGVLEPTISKVKSLKS 530 (559)
T ss_dssp SEEESTTSSCCEEHHHHHHHHHH
T ss_pred cEeehhhccCEecHHHHHHHHHH
Confidence 99999999999999999999974
No 47
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.7e-38 Score=354.94 Aligned_cols=360 Identities=16% Similarity=0.209 Sum_probs=256.7
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHH-Hh------hcc------------------c-----
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAE-VN------LKM------------------H----- 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~-~~------~~~------------------~----- 271 (629)
.+||.++|+++.++.|++++|||||||+.++++||++|+.||+. +. .++ .
T Consensus 69 ~~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~ 148 (527)
T 3p9d_B 69 LDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTM 148 (527)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHH
T ss_pred cCCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchh
Confidence 46999999999999999999999999999999999999999866 30 000 0
Q ss_pred --cccCccccccccccCCCHHHHHHHHHhCcEEEeccchh---hHHHHHHHhCCcccccc--c--ccCcCCCcc-cceEE
Q psy14945 272 --KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRR---NMERLSLACGGTAMNSV--E--GLEPAHLGY-AGSVF 341 (629)
Q Consensus 272 --~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~---dl~rIak~tGg~i~~s~--~--~l~~~~lG~-~~~v~ 341 (629)
+.+..++.+++++|.++. ..++|.+..+.++..+... ++++|.+..|+++.++. + .+++..... .+
T Consensus 149 ~~~~l~~vA~tSl~sK~~~~-~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~--- 224 (527)
T 3p9d_B 149 FREDLIHIAKTTLSSKILSQ-DKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPK--- 224 (527)
T ss_dssp HHHHHHHHHHHHHTTSGGGG-GHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSCCS---
T ss_pred hHHHHHHHHHhccccCcccc-hHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCCCe---
Confidence 111123334555554432 2455666666666666543 35677777888887763 1 133322211 22
Q ss_pred EEEEcCeeEEEEeecC----CC--ccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHH
Q psy14945 342 EHVLGEEKFTFVEECK----NP--QSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQ 413 (629)
Q Consensus 342 e~~i~~~~~~~~~~~~----~~--~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~ 413 (629)
++.+.++.++. |+ .+ ...++.+.++.+. ..++.++.+...+..+... .-+.|+...|..+++++ ||.
T Consensus 225 --~~~n~kIlll~-~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~-g~~vvi~~~~I~~~al~-~L~ 299 (527)
T 3p9d_B 225 --RIENAKILIAN-TTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKF-GINTFINRQLIYDYPEQ-LFT 299 (527)
T ss_dssp --CCSSCEEEEEC-SCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTT-CCBEEESSCCCTTTHHH-HHH
T ss_pred --eeecceEEEec-cccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEECCCCCHHHHH-HHH
Confidence 34688888886 33 12 2455556655542 2333344455554444222 22457888888889886 777
Q ss_pred hhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-----------------C---Cc--eEE
Q psy14945 414 NYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A-----------------P---GV--AVG 469 (629)
Q Consensus 414 ~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~-----------------~---~~--~~G 469 (629)
+.+. .+....+..++++|++ +|...+..++++...+.+ + | .. ++-
T Consensus 300 ~~~i~av~~~~~~dle~ia~~-----------tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~ 368 (527)
T 3p9d_B 300 DLGINSIEHADFEGVERLALV-----------TGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIV 368 (527)
T ss_dssp HTCBCCCCCCHHHHHHHHHHH-----------TCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECB
T ss_pred HCCCEEEecCCHHHHHHHHHH-----------hCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEE
Confidence 7653 4455567778888877 444433333333222221 0 1 11 223
Q ss_pred EEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhh
Q psy14945 470 VDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTK 549 (629)
Q Consensus 470 id~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~ 549 (629)
+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++++.+.++++|++++
T Consensus 369 lrg~te~~l~E~kr~i~DAl~~~r~av~-------~g~iVpGGGa~e-~~~s~~L~~~~~~~~g~eq~~i~--------- 431 (527)
T 3p9d_B 369 LRGATDQTLDEAERSLHDALSVLSQTTK-------ETRTVLGGGCAE-MVMSKAVDTEAQNIDGKKSLAVE--------- 431 (527)
T ss_dssp CCTTCTTHHHHHHTHHHHHHHHHHHHHH-------CCCEEETTTHHH-HHHHHHHHHHHHHHCSHHHHHHH---------
T ss_pred EcCCCHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccCCcHHH-HHHHHHHHHHHhccCcHHHHHHH---------
Confidence 4667889999999999999999999998 999999999999 99999999999888999999999
Q ss_pred hHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 550 VERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 550 ~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|++|||+||++||+|||+|+.+++++||+.|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 432 ---------~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 500 (527)
T 3p9d_B 432 ---------AFARALRQLPTILADNAGFDSSELVSKLRSSIYN-GISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSS 500 (527)
T ss_dssp ---------HHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHH-TCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-CCCceeEECCCCCCcchHhccCEEcHHHHHHHHHH
Confidence 4667778899999999999999999999999986 66789999999999999999999999999999974
No 48
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=6.1e-38 Score=351.63 Aligned_cols=364 Identities=21% Similarity=0.265 Sum_probs=253.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHH-------------------hh-----cc------c
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEV-------------------NL-----KM------H 271 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~-------------------~~-----~~------~ 271 (629)
.+||+++|+++.++.|++++|||||||+.++++||++|+.||+.+ .+ .. +
T Consensus 68 v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~ 147 (546)
T 3p9d_F 68 IQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDR 147 (546)
T ss_dssp CCCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTC
T ss_pred CcCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCH
Confidence 479999999999999999999999999999999999999998661 00 00 1
Q ss_pred cccCccccccccccCCCHHHHHHHHHhCcEEEeccch-------hhHHHHHHHhCCccccccc--c--cCcCCCcccceE
Q psy14945 272 KFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKR-------RNMERLSLACGGTAMNSVE--G--LEPAHLGYAGSV 340 (629)
Q Consensus 272 ~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~-------~dl~rIak~tGg~i~~s~~--~--l~~~~lG~~~~v 340 (629)
+.+..++.+++++| +.....++|++.++.++..+.. .++.++.+..|+++.+|.. . ++.... +..
T Consensus 148 ~~L~~vA~tsl~sK-i~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~-~~~-- 223 (546)
T 3p9d_F 148 EFLLQVARSSLLTK-VDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGR-HPD-- 223 (546)
T ss_dssp HHHHHHHHHHTCST-THHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCC-SSS--
T ss_pred HHHHHHHHHHhCCC-cchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccc-ccc--
Confidence 11222333455554 3334455666666655544431 1345667777888887741 1 222211 111
Q ss_pred EEEEEcCeeEEEEeecC-----CCccEEEEecCCCcc--CHHHHHHHHHhhHHHHHHHh----h----CC-CcccCCChH
Q psy14945 341 FEHVLGEEKFTFVEECK-----NPQSVTILLKGPNKH--TLAQTKDAVRDGLRAIKNTI----D----DG-AVVPGAGAF 404 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~-----~~~~~TIll~g~~~~--~l~e~~r~i~dal~vv~~~~----~----~~-~VV~GGG~~ 404 (629)
....+.+.++.+++ |+ .....++.+..+.+. ++++-++.+.+.+..+..+. + .| .|+...|..
T Consensus 224 m~~~~en~kIll~~-~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~ 302 (546)
T 3p9d_F 224 MPTRVKNAYVLILN-VSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGID 302 (546)
T ss_dssp SCSSBCSCCCCEEC-CCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCC
T ss_pred CcceecCceEEEec-CcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCc
Confidence 01225588888886 33 124677888887754 33333344444443332221 1 12 456677999
Q ss_pred HHHHHHHHHhhhh-hcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC-C-------------------
Q psy14945 405 EVAAWHALQNYKN-TVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE-A------------------- 463 (629)
Q Consensus 405 El~l~~~L~~~~~-~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~-~------------------- 463 (629)
+++++ ||.+++. .+....+..++++|++. |...+..++++...+.+ +
T Consensus 303 ~~Al~-~L~~~gI~~vr~v~~~~leria~~t-----------Ga~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~ 370 (546)
T 3p9d_F 303 PMSLD-VFAKHNILALRRAKRRNMERLQLVT-----------GGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTEN 370 (546)
T ss_dssp HHHHH-HHTTTTCEEECCCCHHHHHHHHHTT-----------TBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSC
T ss_pred HHHHH-HHHHCCCeeEecCCHHHHHHHHHHh-----------CCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecC
Confidence 99996 8877664 34444577788888774 43333222222222221 0
Q ss_pred C-Cc--eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHH---hhccCCChHHH
Q psy14945 464 P-GV--AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLES---LKITTPPSREI 537 (629)
Q Consensus 464 ~-~~--~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~---~~~~~~~~~~~ 537 (629)
+ .. ++-+++.|...+++.++.++|++++.+++++ ++++|||||++| ++++..|++ ++.+.++++|+
T Consensus 371 ~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~-------~~~iVpGGGa~e-~~~s~~L~~~~~~~~~~~g~eq~ 442 (546)
T 3p9d_F 371 TDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLK-------DKNIIPGAGAFY-IALSRYLRSANMNKLGAKGKTKT 442 (546)
T ss_dssp SCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTT-------SCCEEETTTHHH-HHHHHHHHHHHTTTTTTTSHHHH
T ss_pred CCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhc-------CCcEEeCCCHHH-HHHHHHHHhhhhhhhcCchHHHH
Confidence 1 11 2334666888999999999999999999997 899999999999 999999999 58889999999
Q ss_pred HHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhc----CCCceeeEecCCCcccccccC
Q psy14945 538 LLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGE----APGVAVGVDVNSGEVLNPTSA 613 (629)
Q Consensus 538 ~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~----~~~~~~Gvd~~~g~i~d~~~~ 613 (629)
+++ +|++|||+||++||+|||+|+.+++++||+.|.+ .++.++|+|+.+|++.||.+.
T Consensus 443 ~i~------------------~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~ 504 (546)
T 3p9d_F 443 GIE------------------AFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIE 504 (546)
T ss_dssp HHH------------------HHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGG
T ss_pred HHH------------------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhc
Confidence 999 4677788899999999999999999999999962 124689999999999999999
Q ss_pred CccccHHHHHHHhhc
Q psy14945 614 GIYDNLTVKRQIINS 628 (629)
Q Consensus 614 gI~dp~~vK~~~i~~ 628 (629)
|||||+.||+|+|++
T Consensus 505 gI~dp~~vk~~al~~ 519 (546)
T 3p9d_F 505 GIWDSYRVLRNAITG 519 (546)
T ss_dssp TCEEEHHHHHHHHHH
T ss_pred cCEecHHHHHHHHHH
Confidence 999999999999974
No 49
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.97 E-value=8.3e-31 Score=252.59 Aligned_cols=173 Identities=27% Similarity=0.454 Sum_probs=146.5
Q ss_pred ccceEEEEeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhh
Q psy14945 162 DVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMT 241 (629)
Q Consensus 162 ~~dS~li~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~ 241 (629)
+.||+|++|++|++++.|++||++++||||++++|+|++++++.+. ++.+++..++.+++.+|++++++.
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~---------~v~i~~~~~~~~~~~~E~~~l~~~- 70 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQT---------DIEITREEDFTRILQMEEEYIHQL- 70 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC-----------------------CHHHHHHHHHHHHHHH-
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCcc---------EEEECCHHHHHHHHHHHHHHHHHH-
Confidence 4689999999999999999999999999999999999999999876 789999999999999999999999
Q ss_pred CCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCc
Q psy14945 242 GDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGT 321 (629)
Q Consensus 242 GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~ 321 (629)
|.+|. ..++ .+ ++++++|+|.+++||++++|++++++++++++|||++|||+
T Consensus 71 -------v~kI~-------------~~g~----nV----Vl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~ 122 (178)
T 1gml_A 71 -------CEDII-------------QLKP----DV----VITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGAR 122 (178)
T ss_dssp -------HHHHH-------------TTCC----SE----EEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCC
T ss_pred -------HHHHh-------------hcCC----cE----EEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCe
Confidence 99988 5565 33 57899999999999999999999999999999999999999
Q ss_pred ccccccccCcCCCcc-cceEEEEEEcCeeEEEEeecCCCccEEEEecCCCcc
Q psy14945 322 AMNSVEGLEPAHLGY-AGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKH 372 (629)
Q Consensus 322 i~~s~~~l~~~~lG~-~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~ 372 (629)
+++++++++++.+|+ |+.+++.+++++++++|++|+++..|||+|||++..
T Consensus 123 iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 123 IVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASHH 174 (178)
T ss_dssp EESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEESSTTSCEEEEEC----
T ss_pred EeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCCCCCEEEEEEECCCcc
Confidence 999999999999999 999999999999999999999999999999999853
No 50
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.97 E-value=1.8e-32 Score=306.13 Aligned_cols=132 Identities=16% Similarity=0.240 Sum_probs=120.5
Q ss_pred eEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHh
Q psy14945 467 AVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSL 546 (629)
Q Consensus 467 ~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al 546 (629)
++-+++.|...+++.++.++|++++.+++++ ++ +|||||++| ++++..|++++.+.++++|++++
T Consensus 376 tI~lrG~te~~l~E~~r~i~DAl~~~r~av~-------~g-iVpGGGa~e-~~~s~~L~~~~~~~~g~~q~~i~------ 440 (543)
T 1we3_A 376 VIRVGAATETELKEKKHRFEDALNATRAAVE-------EG-IVPGGGVTL-LRAISAVEELIKKLEGDEATGAK------ 440 (543)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHHHHHHH-------HC-EEETTTHHH-HHHHHHHHHHHTTCCHHHHHHHH------
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHHHHHHhc-------cC-cCCCccHHH-HHHHHHHHHHhhccCchHHHHHH------
Confidence 3446777888999999999999999999997 66 999999999 99999999999888999999999
Q ss_pred hhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHh
Q psy14945 547 RTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQII 626 (629)
Q Consensus 547 ~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i 626 (629)
+|++||++||++||+|||+|+.+++++||+.|. +.++|+|+.+|++.||.+.|||||+.||+|+|
T Consensus 441 ------------~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 505 (543)
T 1we3_A 441 ------------IVRRALEEPARQIAENAGYEGSVIVQQILAETK---NPRYGFNAATGEFVDMVEAGIVDPAKVTRSAL 505 (543)
T ss_dssp ------------HHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS---CTTEEEETTTTEEEETTTTTCEEEHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC---CCCEEEeCCCCeecccccCCcCccHHHHHHHH
Confidence 466777889999999999999999999999883 46799999999999999999999999999999
Q ss_pred hc
Q psy14945 627 NS 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 506 ~~ 507 (543)
T 1we3_A 506 QN 507 (543)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 51
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.97 E-value=2.4e-32 Score=305.05 Aligned_cols=344 Identities=14% Similarity=0.125 Sum_probs=208.6
Q ss_pred cccc----HHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhcc---------------------------
Q psy14945 222 IQHP----TASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKM--------------------------- 270 (629)
Q Consensus 222 ~~~~----~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~--------------------------- 270 (629)
.+|| .++|+++.++.|++++|||||||+.++++||++|+.|++.+ ..|
T Consensus 62 ~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~G-ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~ 140 (545)
T 1iok_A 62 LSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAG-MNPMDLKRGIDVATAKVVEAIKSAARPVND 140 (545)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCS
T ss_pred cCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 4799 99999999999999999999999999999999999999772 111
Q ss_pred ccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccc-----ccCcCCCc-----ccceE
Q psy14945 271 HKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVE-----GLEPAHLG-----YAGSV 340 (629)
Q Consensus 271 ~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~-----~l~~~~lG-----~~~~v 340 (629)
++.+.-++.++++ -++...++.+++. ..+.......| ..|+++.+|+. .+++.... ..+.
T Consensus 141 ~e~l~~va~iS~~---~~~~i~~li~dAv----~~V~~~g~I~V--e~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~- 210 (545)
T 1iok_A 141 SSEVAQVGTISAN---GESFIGQQIAEAM----QRVGNEGVITV--EENKGMETEVEVVEGMQFDRGYLSPYFVTNADK- 210 (545)
T ss_dssp TTTTTHHHHHTTT---TCHHHHHHHHHHH----HHHCTTSCCCC--EECSSSCCEEEEECCEECSCCCSCGGGCCCSSS-
T ss_pred HHHHHHHHHhhcC---CchhHHHHHHHHH----HHhccCCeEEE--EeCCccccceEEEecEEEecCccccccccCccc-
Confidence 1111111111111 1233333333322 22221111111 15777766632 12222110 0111
Q ss_pred EEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhh---
Q psy14945 341 FEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKN--- 417 (629)
Q Consensus 341 ~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~--- 417 (629)
....+.+.++.+++ ++ |..+.+ .+.-+++ +... .-+.++...+..+.+++ +|...+.
T Consensus 211 m~~~~en~~Ill~d-~~--------I~~~~~-l~~~le~--------i~~~-g~~lvIi~~~I~~~Al~-~L~~n~irg~ 270 (545)
T 1iok_A 211 MIAELEDAYILLHE-KK--------LSSLQP-MVPLLES--------VIQS-QKPLLIVAEDVEGEALA-TLVVNKLRGG 270 (545)
T ss_dssp SCEEEEEEEEEECS-SC--------BCCCCC---------------------CCCCEEEESCBC----------------
T ss_pred CceeecCCeEEEEc-CC--------cCCHHH-HHHHHHH--------HHhc-CCCEEEECCCcCHHHHH-HHHHcccccc
Confidence 01123456665554 32 333332 2222222 1111 22568888899999997 5543211
Q ss_pred ---------hcCcchHHHHHHHHHHHhhhhHH------HH----HhcCC------------------ChHHH---HHHHH
Q psy14945 418 ---------TVKGKSRLGIQAYAEALLIIPKT------IA----VNSGF------------------DAQDT---LVKLQ 457 (629)
Q Consensus 418 ---------~i~~~~k~~i~~fa~ALe~ip~~------L~----~NaG~------------------d~~~v---l~~L~ 457 (629)
.+....+..++++|++....+-. +. +..|. ++..+ +.+++
T Consensus 271 ~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~ 350 (545)
T 1iok_A 271 LKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIR 350 (545)
T ss_dssp --CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHH
T ss_pred ceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHH
Confidence 12245677888888876653321 10 01110 11110 11111
Q ss_pred HhhcCC------------------CCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHH
Q psy14945 458 EACGEA------------------PGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLK 519 (629)
Q Consensus 458 ~~~~~~------------------~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~ 519 (629)
.....+ +..++-+++.|...+++.++.++|++++.+++++ ++ +|||||++| ++
T Consensus 351 ~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~-------~g-iVpGGGa~e-~~ 421 (545)
T 1iok_A 351 QQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQ-------EG-IVVGGGVAL-VQ 421 (545)
T ss_dssp HHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHH-------HC-EEETTTHHH-HH
T ss_pred HHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhh-------cC-CCCCchHHH-HH
Confidence 100000 0123445677888999999999999999999997 66 999999999 99
Q ss_pred HHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceee
Q psy14945 520 ALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVG 599 (629)
Q Consensus 520 ~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~G 599 (629)
++..|++++. .++++|+++++ |++||++||++||+|||+|+.+++++||+.| +.++|
T Consensus 422 ~s~~L~~~~~-~~g~~q~~i~~------------------~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~----~~~~G 478 (545)
T 1iok_A 422 GAKVLEGLSG-ANSDQDAGIAI------------------IRRALEAPMRQIAENAGVDGAVVAGKVRESS----DKAFG 478 (545)
T ss_dssp HGGGGGSCCC-SSHHHHHHHHH------------------HHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC----STTEE
T ss_pred HHHHHHHHhc-cCchHHHHHHH------------------HHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc----CCCee
Confidence 9999999987 78899999994 6677788999999999999999999999876 25799
Q ss_pred EecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 600 VDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 600 vd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 507 (545)
T 1iok_A 479 FNAQTEEYGDMFKFGVIDPAKVVRTALED 507 (545)
T ss_dssp EETTTTEEEEHHHHTCEEEHHHHHHHHHH
T ss_pred EeCCCCcccchHhcCcEEccHHHHHHHHH
Confidence 99999999999999999999999999974
No 52
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.96 E-value=2.6e-31 Score=296.50 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=115.5
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|...+++.++.++|++++.+++++ ++ +|||||++| ++++..|++++. .++++|+++++
T Consensus 378 I~vrG~te~~l~E~kr~i~DAl~~~r~av~-------~g-iVpGGGa~e-~~~s~~L~~~~~-~~g~~q~~i~~------ 441 (547)
T 1kp8_A 378 IKVGAATEVEMKEKKARVEDALHATRAAVE-------EG-VVAGGGVAL-IRVASKLADLRG-QNADQNVGIKV------ 441 (547)
T ss_dssp EECCCSSHHHHHHHHHHHHHHHHHHHHHHH-------HC-EEETTTHHH-HHHHHHTTTCCC-SSHHHHHHHHH------
T ss_pred EEEcCCcHhHHHHHHHHHHHHHHHHHHhcc-------CC-EEeCCcHHH-HHHHHHHHHHhc-cCchHHHHHHH------
Confidence 345667888999999999999999999997 76 999999999 999999999986 78899999994
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
|++||++||++||+|||+|+.+++++||+. +.++|+|+.+|++.||.+.|||||+.||+|+|+
T Consensus 442 ------------~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~ 504 (547)
T 1kp8_A 442 ------------ALRAMEAPLRQIVLNCGEEPSVVANTVKGG-----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQ 504 (547)
T ss_dssp ------------HHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-----CCCEeEeCCCCccccchhcCceechHhHHHHHH
Confidence 667778899999999999999999999964 257999999999999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 505 ~ 505 (547)
T 1kp8_A 505 Y 505 (547)
T ss_dssp H
T ss_pred H
Confidence 4
No 53
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.96 E-value=7.3e-32 Score=300.34 Aligned_cols=127 Identities=16% Similarity=0.207 Sum_probs=114.8
Q ss_pred EEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhh
Q psy14945 468 VGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLR 547 (629)
Q Consensus 468 ~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~ 547 (629)
+-+++.|...+++.++.+.|++++.+++++ ++ +|||||++| ++++..|++++ .++++|++++
T Consensus 377 I~vrG~te~~l~E~er~l~DAl~a~r~av~-------~g-iVpGGGa~e-~~~s~~L~~~~--~~g~eq~~i~------- 438 (546)
T 3rtk_A 377 IKAGAATEVELKERKHRIEDAVRNAKAAVE-------EG-IVAGGGVTL-LQAAPTLDELK--LEGDEATGAN------- 438 (546)
T ss_dssp EECCCCSSTHHHHHHHHHHHHHHHHHHHHH-------HC-EEETTTHHH-HTTGGGSTTSC--CCTTHHHHHH-------
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHHHHHh-------CC-cccCCcHHH-HHHHHHHHHhc--cccHHHHHHH-------
Confidence 345677889999999999999999999987 66 999999999 99999999987 7899999999
Q ss_pred hhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 548 TKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 548 ~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++|||+||++||+|||+|+.+++++||+.+ . ++|+|+.+|++.||.+.|||||+.||+|+|+
T Consensus 439 -----------~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~-~----~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~ 502 (546)
T 3rtk_A 439 -----------IVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP-A----GHGLNAQTGVYEDLLAAGVADPVKVTRSALQ 502 (546)
T ss_dssp -----------HHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSC-T----TEECCSSSCCCEETTTTTCEEEHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-C----CEeEcCCCCcEeeHHHcCCEecHHHHHHHHH
Confidence 46677788999999999999999999999852 2 3899999999999999999999999999997
Q ss_pred c
Q psy14945 628 S 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 503 ~ 503 (546)
T 3rtk_A 503 N 503 (546)
T ss_dssp H
T ss_pred H
Confidence 4
No 54
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.93 E-value=2.9e-26 Score=216.72 Aligned_cols=154 Identities=29% Similarity=0.468 Sum_probs=143.1
Q ss_pred EEeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchH
Q psy14945 168 VKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTS 247 (629)
Q Consensus 168 i~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~ 247 (629)
++|++|++++.|++||++++||||++++|+|++++++.+. ++.+++..++.+++.+|++++++.
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~---------~v~i~~~~~~~~~~~~E~~~l~~~------- 64 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEA---------KVQISDPSKIQDFLNQETNTFKQM------- 64 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHH---------HHHTSCGGGHHHHHHHHHHHHHHH-------
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccce---------eEEECCHHHHHHHHHHHHHHHHHH-------
Confidence 5799999999999999999999999999999999999876 788999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccc
Q psy14945 248 TVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVE 327 (629)
Q Consensus 248 Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~ 327 (629)
|..|. ..++ .+ ++++++|+|.+++||++++|++++++++++++|||++|||+++++++
T Consensus 65 -v~kI~-------------~~g~----nV----Vl~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~ 122 (159)
T 1ass_A 65 -VEKIK-------------KSGA----NV----VLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLD 122 (159)
T ss_dssp -HHHHH-------------HTTC----SE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTT
T ss_pred -hhhhh-------------hCCC----eE----EEECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccc
Confidence 99998 5555 33 57899999999999999999999999999999999999999999999
Q ss_pred ccCcCCCcccceEEEEEEcCeeEEEEeecCCC
Q psy14945 328 GLEPAHLGYAGSVFEHVLGEEKFTFVEECKNP 359 (629)
Q Consensus 328 ~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~ 359 (629)
+++++.+|+|+.+++.+++++++++|++|++.
T Consensus 123 ~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 123 DLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred cCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 99999999999999999999999999998763
No 55
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.45 E-value=6e-14 Score=134.82 Aligned_cols=77 Identities=25% Similarity=0.357 Sum_probs=61.5
Q ss_pred CCceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccCCCC---ccc-CcchhhhHHHhcCchhhhhhhhcccccc
Q psy14945 13 GDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGP---WCA-TPGHAQVREERAHPDMQHQHGIREEGVV 88 (629)
Q Consensus 13 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~---~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 88 (629)
+||+||+|+|+|++.+||+|||+++||+|+++|++|||+|+|.+. +.+ .+.+++.++|++++++++++...-+.-+
T Consensus 2 ~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nV 81 (178)
T 1gml_A 2 EDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDV 81 (178)
T ss_dssp -CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred CCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcE
Confidence 699999999999999999999999999999999999999999655 445 4449999999999999999988777655
Q ss_pred c
Q psy14945 89 L 89 (629)
Q Consensus 89 ~ 89 (629)
+
T Consensus 82 V 82 (178)
T 1gml_A 82 V 82 (178)
T ss_dssp E
T ss_pred E
Confidence 3
No 56
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.29 E-value=8.1e-13 Score=124.51 Aligned_cols=72 Identities=21% Similarity=0.257 Sum_probs=63.5
Q ss_pred EeEEEecCCCCCCCCcccccceEEEEeecccceeccCCCC---ccc-CcchhhhHHHhcCchhhhhhhhccccccc
Q psy14945 18 VKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGP---WCA-TPGHAQVREERAHPDMQHQHGIREEGVVL 89 (629)
Q Consensus 18 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~---~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 89 (629)
|+|+|+||+.+||+|||+++||+|+++|++|||+|+|.+. +.+ ++.+++.++|++++++++++...-+.-++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVV 76 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 76 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEE
Confidence 6899999999999999999999999999999999999654 455 44499999999999999999987776553
No 57
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=98.19 E-value=5e-08 Score=92.73 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=79.6
Q ss_pred eEEEEeEEEeccCCCCC-------CcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHH
Q psy14945 165 IILVKGVVLNHGARHPD-------MPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAM 237 (629)
Q Consensus 165 S~li~Gvv~~~~~~~~~-------m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~ 237 (629)
.++++||.|+++|.+|+ |...++||.||+++..++ ..+..+|.|+..+ ++..+.++..|.---
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs----~i~~ilP~LE~~~------~~~kpLlIIAedveg 71 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKIS----SLPDLLPLLEKVA------GTGKPLLIVAEDVEG 71 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEEC----CHHHHHHHHHHHH------HHTCCEEEEESEECH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccC----CHHHHHHHHHHHH------HhCCCeEEEeccccc
Confidence 46789999999999996 455689999999999884 3344555555320 011111111111001
Q ss_pred hhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHH
Q psy14945 238 DDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLA 317 (629)
Q Consensus 238 ~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~ 317 (629)
+.. +|.|++ +.++.+.+|++ ...|+.| .++..++.||.+
T Consensus 72 eaL----atLvvN------------------klrg~l~v~AV---KAPgfGd----------------~Rk~~L~DiAil 110 (194)
T 3m6c_A 72 EAL----ATLVVN------------------AIRKTLKAVAV---KGPYFGD----------------RRKAFLEDLAVV 110 (194)
T ss_dssp HHH----HHHHHH------------------HHHTSSCEEEE---ECSSCHH----------------HHHHHHHHHHHH
T ss_pred chh----hhhhhh------------------hccceEEEEEE---ECCCCch----------------hhhhhhHhHHHh
Confidence 111 122222 22344556642 2334433 135679999999
Q ss_pred hCCccccc-----ccccCcCCCcccceEEEEEEcCeeEEEE
Q psy14945 318 CGGTAMNS-----VEGLEPAHLGYAGSVFEHVLGEEKFTFV 353 (629)
Q Consensus 318 tGg~i~~s-----~~~l~~~~lG~~~~v~e~~i~~~~~~~~ 353 (629)
|||++++. +++.+.+.+|+|+++. ++.+..+++
T Consensus 111 TGg~visee~g~~Le~~~~~~LG~a~~v~---vtkd~T~iv 148 (194)
T 3m6c_A 111 TGGQVVNPDAGMVLREVGLEVLGSARRVV---VSKDDTVIV 148 (194)
T ss_dssp HTCCCBCGGGTCCGGGCCGGGCEEEEEEE---ECSSCEEEE
T ss_pred cCCeEEeccCCcccccCCHHHCCCccEEE---EcCCceEEe
Confidence 99999975 3456778899998776 444444444
No 58
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=98.15 E-value=9.6e-08 Score=86.72 Aligned_cols=131 Identities=18% Similarity=0.237 Sum_probs=80.2
Q ss_pred eEEEeccCCCCCC-------cccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhC
Q psy14945 170 GVVLNHGARHPDM-------PKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTG 242 (629)
Q Consensus 170 Gvv~~~~~~~~~m-------~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~G 242 (629)
|+.|+++|.+|+| ...++||.|++++..++ ..+..+|.|+.. .+...| .++..|.---+.
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs----~i~~llP~LE~v----~~~~~p--LlIIAedvegea--- 67 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVS----NVRELLPILEQV----AQTGKP--LLIIAEDVEGEA--- 67 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEEC----CHHHHHHHHHHH----HTTTCC--EEEEESEECHHH---
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccccc----CHHHHHHHHHHH----HHHCCC--EEEEecccchhh---
Confidence 8999999999964 45688999999999884 345566666643 011111 222222211111
Q ss_pred CCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcc
Q psy14945 243 DGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTA 322 (629)
Q Consensus 243 DGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i 322 (629)
+..+. .++.++.+.+|++ ...|+.| .++..++.||.+|||++
T Consensus 68 ------LatLv-------------vNklrg~l~v~AV---KAPgfGd----------------~Rk~~L~DiAilTGg~v 109 (145)
T 1srv_A 68 ------LATLV-------------VNKLRGTLSVAAV---KAPGFGD----------------RRKEMLKDIAAVTGGTV 109 (145)
T ss_dssp ------HHHHH-------------HHHHTTSCCEEEE---ECCSSHH----------------HHHHHHHHHHHHHTCCE
T ss_pred ------hhhhh-------------hhhhcccceEEEE---eCCCcch----------------hhHHHHHHHHHHhCCEE
Confidence 12222 2233555666652 2334433 24568999999999999
Q ss_pred cccc-----cccCcCCCcccceEEEEEEcCeeEEEEe
Q psy14945 323 MNSV-----EGLEPAHLGYAGSVFEHVLGEEKFTFVE 354 (629)
Q Consensus 323 ~~s~-----~~l~~~~lG~~~~v~e~~i~~~~~~~~~ 354 (629)
++.- ++.+.+.+|+|+++. +..++.+++.
T Consensus 110 isee~g~~Le~~~~~~LG~a~~v~---vtkd~TtIv~ 143 (145)
T 1srv_A 110 ISEELGFKLENATLSMLGRAERVR---ITKDETTIVG 143 (145)
T ss_dssp ECTTTTCCGGGCCGGGCEEEEEEE---ECSSCEEEEE
T ss_pred EccccCCccccCCHhHCCccCEEE---EcCCCeEEeC
Confidence 9763 356677899998876 6666666654
No 59
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=98.03 E-value=2.7e-07 Score=87.89 Aligned_cols=131 Identities=16% Similarity=0.237 Sum_probs=78.2
Q ss_pred EeEEEeccCCCCCC-------cccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhh
Q psy14945 169 KGVVLNHGARHPDM-------PKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMT 241 (629)
Q Consensus 169 ~Gvv~~~~~~~~~m-------~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~ 241 (629)
+|+.|+++|.+|+| ...++||.||+++..++ ..+..+|.|+..+ +...+.++..|.---+..
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs----~i~~ilP~LE~v~------~~~rpLlIIAEDvegEAL- 81 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKIS----NIRELLPVLEGVA------KASKPLVIIAEDVEGEAL- 81 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEEC----CHHHHHHHHHHHH------TSSCCEEEEEEEECHHHH-
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCccC----CHHHHHHHHHHHH------HhCCCeEEEeccccchhh-
Confidence 59999999999974 45689999999999884 3445666666431 111111222222111111
Q ss_pred CCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCc
Q psy14945 242 GDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGT 321 (629)
Q Consensus 242 GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~ 321 (629)
+|.|+++ .++.+.+|++ ...|+.| .++..++.||.+|||+
T Consensus 82 ---atLvvNk------------------lrg~l~v~AV---KAPgFGd----------------rRk~~L~DIAilTGg~ 121 (201)
T 3osx_A 82 ---ATLVVNN------------------MRGIVKVASV---KAPGFGD----------------RRKAMLQDIATLTNGT 121 (201)
T ss_dssp ---HHHHHHH------------------HHTSCCEEEE---ECSSCHH----------------HHHHHHHHHHHHHTCC
T ss_pred ---hHHHHhh------------------ccceEEEEEE---eCCCCcc----------------chhhhhHhHHHHhCCE
Confidence 1222222 2344566642 2334433 1456799999999999
Q ss_pred cccc-----ccccCcCCCcccceEEEEEEcCeeEEEE
Q psy14945 322 AMNS-----VEGLEPAHLGYAGSVFEHVLGEEKFTFV 353 (629)
Q Consensus 322 i~~s-----~~~l~~~~lG~~~~v~e~~i~~~~~~~~ 353 (629)
+++. +++++.+.+|+|+++. ++.+..+++
T Consensus 122 visee~g~~Le~~~~~~LG~a~~V~---vtkd~TtIv 155 (201)
T 3osx_A 122 VISEEIGLELEKATLEDLGQAKRVV---INKDTTTII 155 (201)
T ss_dssp CBCGGGTCCGGGCCGGGCEEEEEEE---ECSSCEEEE
T ss_pred EEecccCCccccCCHhhCCCccEEE---EcCCceEEe
Confidence 9976 3456777899998776 444444444
No 60
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=20.92 E-value=36 Score=32.20 Aligned_cols=30 Identities=20% Similarity=0.280 Sum_probs=24.9
Q ss_pred eeEeEEEecCCCCCCCC-------cccccceEEEEee
Q psy14945 16 CLVKGVVLDHGARHPDM-------PKSVKNAHILTCN 45 (629)
Q Consensus 16 ~~~~g~~~~~~~~~~~~-------~~~~~~~~i~~~~ 45 (629)
.+|+|+-+|.|--.|-| --.++|||||+++
T Consensus 3 evvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitd 39 (194)
T 3m6c_A 3 EFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQ 39 (194)
T ss_dssp CCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBS
T ss_pred EEEeeeEccCcccCceeeeccCCcEEEEecceEEEEc
Confidence 47899999999887754 5578999999976
Done!