Query psy14945
Match_columns 629
No_of_seqs 466 out of 2516
Neff 7.2
Searched_HMMs 13730
Date Fri Aug 16 16:29:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14945.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14945hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gmla_ c.8.5.2 (A:) Thermosom 99.9 3.6E-27 2.6E-31 223.1 17.2 167 164-368 1-168 (168)
2 d1q3qa2 c.8.5.2 (A:217-369) Th 99.9 5.1E-25 3.7E-29 205.0 16.1 153 169-359 1-153 (153)
3 d1a6db2 c.8.5.2 (B:216-367) Th 99.9 7E-25 5.1E-29 203.7 15.3 152 170-359 1-152 (152)
4 d1assa_ c.8.5.2 (A:) Thermosom 99.9 1.1E-24 8E-29 202.4 12.4 152 168-357 1-152 (152)
5 d1a6db1 a.129.1.2 (B:20-144,B: 99.9 5.7E-24 4.2E-28 212.3 12.9 187 222-510 53-239 (243)
6 d1a6da1 a.129.1.2 (A:17-145,A: 99.8 1.6E-21 1.2E-25 194.9 8.7 186 222-510 57-242 (245)
7 d1a6db1 a.129.1.2 (B:20-144,B: 99.8 3.7E-21 2.7E-25 191.7 10.4 107 502-628 121-227 (243)
8 d1q3qa1 a.129.1.2 (A:9-145,A:4 99.7 2.3E-18 1.7E-22 173.0 12.5 185 222-509 66-250 (258)
9 d1a6da1 a.129.1.2 (A:17-145,A: 99.7 3E-18 2.2E-22 170.9 7.9 104 505-628 127-230 (245)
10 d1we3a1 a.129.1.1 (A:3-138,A:4 99.6 1.7E-15 1.2E-19 151.6 13.3 183 223-509 65-247 (255)
11 d1sjpa1 a.129.1.1 (A:62-134,A: 99.5 5.5E-15 4E-19 140.0 9.6 171 223-505 4-175 (180)
12 d1q3qa1 a.129.1.2 (A:9-145,A:4 99.5 1.2E-14 8.4E-19 145.7 7.7 104 505-628 136-239 (258)
13 d1we3a1 a.129.1.1 (A:3-138,A:4 99.4 5.9E-13 4.3E-17 132.8 12.3 105 501-627 131-235 (255)
14 d1sjpa1 a.129.1.1 (A:62-134,A: 99.3 1.1E-12 8E-17 123.9 5.0 113 483-627 55-167 (180)
15 d1gmla_ c.8.5.2 (A:) Thermosom 99.2 4.7E-12 3.5E-16 118.2 4.3 74 14-87 1-78 (168)
16 d1q3qa2 c.8.5.2 (A:217-369) Th 99.0 5.9E-11 4.3E-15 108.9 5.0 70 19-88 1-74 (153)
17 d1a6db2 c.8.5.2 (B:216-367) Th 99.0 1.2E-10 8.8E-15 106.7 6.0 69 20-88 1-73 (152)
18 d1assa_ c.8.5.2 (A:) Thermosom 99.0 9.9E-11 7.2E-15 107.3 3.6 71 18-88 1-75 (152)
19 d1q3qa3 d.56.1.2 (A:146-216,A: 98.9 3E-11 2.2E-15 104.1 -0.6 95 102-205 9-105 (107)
20 d1ioka1 a.129.1.1 (A:2-136,A:4 98.9 1.1E-09 8.2E-14 108.4 10.9 103 397-504 137-239 (252)
21 d1a6da3 d.56.1.2 (A:146-214,A: 98.9 1.2E-10 8.8E-15 99.7 0.9 95 102-205 6-102 (105)
22 d1kp8a1 a.129.1.1 (A:2-136,A:4 98.8 1.4E-08 1E-12 100.4 14.7 166 226-503 69-237 (252)
23 d1a6da3 d.56.1.2 (A:146-214,A: 98.8 4.6E-11 3.4E-15 102.4 -3.2 51 1-54 51-101 (105)
24 d1a6db3 d.56.1.2 (B:145-215,B: 98.7 2E-10 1.5E-14 98.7 -3.2 91 102-199 8-105 (107)
25 d1q3qa3 d.56.1.2 (A:146-216,A: 98.7 1.5E-10 1.1E-14 99.6 -6.0 51 1-54 54-104 (107)
26 d1a6db3 d.56.1.2 (B:145-215,B: 98.6 2.1E-10 1.6E-14 98.5 -7.7 48 1-49 53-105 (107)
27 d1ioka1 a.129.1.1 (A:2-136,A:4 98.5 4.2E-08 3.1E-12 96.8 6.1 99 505-627 134-232 (252)
28 d1sjpa2 c.8.5.1 (A:189-372) Gr 98.1 2.7E-07 2E-11 86.3 2.2 130 170-353 1-142 (184)
29 d1kp8a1 a.129.1.1 (A:2-136,A:4 98.1 2E-06 1.5E-10 84.5 8.4 96 507-627 136-231 (252)
30 d1kida_ c.8.5.1 (A:) GroEL, A 98.1 7.4E-08 5.4E-12 90.8 -2.6 135 165-353 4-150 (193)
31 d1ioka2 c.8.5.1 (A:191-366) Gr 98.1 1.9E-07 1.4E-11 86.7 0.2 131 169-353 1-143 (176)
32 d1srva_ c.8.5.1 (A:) GroEL, A 98.0 1E-07 7.5E-12 85.6 -2.9 44 308-354 95-143 (145)
33 d1sjpa3 d.56.1.1 (A:135-188,A: 87.0 0.0026 1.9E-07 51.3 -8.1 50 146-195 29-88 (89)
34 d1st6a3 a.24.9.1 (A:253-371) V 39.4 72 0.0052 25.6 8.8 70 373-443 13-85 (119)
35 d1we3a3 d.56.1.1 (A:139-189,A: 37.1 1.1 7.9E-05 35.0 -2.9 32 146-177 27-60 (86)
36 d1ioka3 d.56.1.1 (A:137-190,A: 29.1 20 0.0015 28.0 3.6 34 360-393 63-96 (97)
37 d1kida_ c.8.5.1 (A:) GroEL, A 25.0 12 0.00085 33.3 1.5 36 14-49 3-45 (193)
No 1
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=99.94 E-value=3.6e-27 Score=223.12 Aligned_cols=167 Identities=26% Similarity=0.461 Sum_probs=142.5
Q ss_pred ceEEEEeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCC
Q psy14945 164 CIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGD 243 (629)
Q Consensus 164 dS~li~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GD 243 (629)
||++++|++|+++..|+.||++++||||++++|+|++++++.+. ++.+++..++..++.+|++++.+.
T Consensus 1 DS~li~Gvvi~k~~~~~~m~~~i~~~kIlll~~~le~~~~~~~~---------~i~i~~~~~l~~~~~~E~~~l~~~--- 68 (168)
T d1gmla_ 1 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQT---------DIEITREEDFTRILQMEEEYIHQL--- 68 (168)
T ss_dssp CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC-----------------------CHHHHHHHHHHHHHHH---
T ss_pred CcEEEEEEEEecccCCcCCccccCCceEEEEecccccccccccc---------ceecCCHHHHHHHHHHHHHHHHHH---
Confidence 79999999999999999999999999999999999999998876 788999999999999999999999
Q ss_pred CchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccc
Q psy14945 244 GTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAM 323 (629)
Q Consensus 244 GTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~ 323 (629)
+..|. ..++ .+ ++++++|++.+++||++++|++++++++++++|||++|||+++
T Consensus 69 -----v~~I~-------------~~g~----~v----v~~~~~I~~~a~~~L~~~gI~~~~rv~~~dl~ria~~tga~iv 122 (168)
T d1gmla_ 69 -----CEDII-------------QLKP----DV----VITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIV 122 (168)
T ss_dssp -----HHHHH-------------TTCC----SE----EEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEE
T ss_pred -----HHHHH-------------hcCC----ce----EEEcCCCCHHHHHHHHHCCCeeeccCCHHHHHHHHHHHCCcee
Confidence 88887 5555 22 5689999999999999999999999999999999999999999
Q ss_pred ccccccCcCCCccc-ceEEEEEEcCeeEEEEeecCCCccEEEEecC
Q psy14945 324 NSVEGLEPAHLGYA-GSVFEHVLGEEKFTFVEECKNPQSVTILLKG 368 (629)
Q Consensus 324 ~s~~~l~~~~lG~~-~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g 368 (629)
+++++++++.+|+| +.+++..++++++++|++|+++..|||+|||
T Consensus 123 ~si~~l~~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~TIllRG 168 (168)
T d1gmla_ 123 SRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRG 168 (168)
T ss_dssp SCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEESSTTSCEEEEEC
T ss_pred CchhhcCcccccccccEEEEEEECCeEEEEEEecCCCCEEEEEEeC
Confidence 99999999999995 6666678899999999999999999999998
No 2
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.92 E-value=5.1e-25 Score=204.98 Aligned_cols=153 Identities=35% Similarity=0.529 Sum_probs=143.2
Q ss_pred EeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHH
Q psy14945 169 KGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTST 248 (629)
Q Consensus 169 ~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~V 248 (629)
+|++|++...|+.||++++||||++++|+|++++++.+. ++.+++..++..++.+|++++.+.
T Consensus 1 kGvv~~k~~~~~~mp~~i~n~kIlll~~~Le~~k~~~~~---------~i~i~~~~~l~~~~~~E~~~l~~~-------- 63 (153)
T d1q3qa2 1 RGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDA---------KINITSPDQLMSFLEQEEKMLKDM-------- 63 (153)
T ss_dssp SSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCC---------CEEECSHHHHHHHHHHHHHHHHHH--------
T ss_pred CeEEEeCCCCCccCCcccCCccEEEEecccccccccccc---------eEEecCHHHHHHHHHHHHHHHHHH--------
Confidence 499999999999999999999999999999999999886 899999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcccccccc
Q psy14945 249 VLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEG 328 (629)
Q Consensus 249 v~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~ 328 (629)
+..|. ..++ .+ ++++++|++.+++||+++||++++++++++++|||++|||++++++++
T Consensus 64 v~~I~-------------~~g~----nv----vl~~k~I~~~a~~~l~~~gI~~v~~v~~~dl~ria~~tGa~iv~si~~ 122 (153)
T d1q3qa2 64 VDHIA-------------QTGA----NV----VFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKD 122 (153)
T ss_dssp HHHHH-------------HHTC----CE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGG
T ss_pred HHHHh-------------ccCc----cc----eeecCCCcHHHHHHHHHcCCceeccCCHHHHHHHHHhhCCEEecchhh
Confidence 88887 4454 22 568999999999999999999999999999999999999999999999
Q ss_pred cCcCCCcccceEEEEEEcCeeEEEEeecCCC
Q psy14945 329 LEPAHLGYAGSVFEHVLGEEKFTFVEECKNP 359 (629)
Q Consensus 329 l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~ 359 (629)
++++.+|+|+.+++.+++++++++|+||++|
T Consensus 123 l~~~~LG~~~~~~~~~~g~~~~~~~~gc~~P 153 (153)
T d1q3qa2 123 LTPEDLGYAEVVEERKLAGENMIFVEGCKNP 153 (153)
T ss_dssp CCGGGCEEESEEEEEEETTEEEEEEECCSSC
T ss_pred CCcccCeeeEEEEEEEECCeeEEEEeCCCCC
Confidence 9999999999999999999999999999875
No 3
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.92 E-value=7e-25 Score=203.70 Aligned_cols=152 Identities=28% Similarity=0.469 Sum_probs=142.4
Q ss_pred eEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchHHH
Q psy14945 170 GVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTSTV 249 (629)
Q Consensus 170 Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~Vv 249 (629)
|++|+++..|+.||++++||||++++|+|++++++.+. ++.+++..++..++.+|++++.+. +
T Consensus 1 Gvv~~k~~~~~~mpk~i~~~kIlll~~~Le~~k~~~~~---------~i~i~~~~~~~~~~~~E~~~l~~~--------v 63 (152)
T d1a6db2 1 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDT---------NLRIEDPSMIQKFLAQEENMLREM--------V 63 (152)
T ss_dssp EEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEE---------EECCCSTTHHHHHHHHHHHHHHHH--------H
T ss_pred CEEEeccCCCCCCCCcccCCcEEEEecccccccccccc---------eeeecCHHHHHHHHHHHHHHHHHH--------H
Confidence 89999999999999999999999999999999998776 888999999999999999999999 8
Q ss_pred HHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccccc
Q psy14945 250 LVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVEGL 329 (629)
Q Consensus 250 ~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~~l 329 (629)
..|. ..++ .+ ++++++|++.+++||.++||++++++++++++|||++|||+++++++++
T Consensus 64 ~~i~-------------~~g~----nv----v~~~k~Idd~a~~~l~k~gI~~v~~v~~~dl~rla~~tGa~iv~s~~~l 122 (152)
T d1a6db2 64 DKIK-------------SVGA----NV----VITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEI 122 (152)
T ss_dssp HHHH-------------HTTC----CE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGC
T ss_pred HHHh-------------ccCC----ce----EEecCCCcHHHHHHHHHcCcchhccCCHHHHHHHHHHhCCeeecchhhC
Confidence 8887 4454 22 5689999999999999999999999999999999999999999999999
Q ss_pred CcCCCcccceEEEEEEcCeeEEEEeecCCC
Q psy14945 330 EPAHLGYAGSVFEHVLGEEKFTFVEECKNP 359 (629)
Q Consensus 330 ~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~ 359 (629)
++..+|+|+.+++.+++++++++|++|++|
T Consensus 123 ~~~~LG~~~~v~~~~~g~~~~~~~~gc~np 152 (152)
T d1a6db2 123 SSSDLGTAERVEQVKVGEDYMTFVTGCKNP 152 (152)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEEEEESSS
T ss_pred CcccCcCceEEEEEEECCEEEEEEeCCCCC
Confidence 999999999999999999999999999875
No 4
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.91 E-value=1.1e-24 Score=202.41 Aligned_cols=152 Identities=29% Similarity=0.468 Sum_probs=141.7
Q ss_pred EEeEEEeccCCCCCCcccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhCCCchH
Q psy14945 168 VKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTGDGTTS 247 (629)
Q Consensus 168 i~Gvv~~~~~~~~~m~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~GDGTt~ 247 (629)
++|++|+++..|+.||++++||||++++++|++++++.+. ++.+++..++..++.+|++++++.
T Consensus 1 i~Gvv~~k~~~~~~mp~~i~~~kI~ll~~~Le~~k~~~~~---------~i~i~~~~~l~~~~~~E~~~l~~~------- 64 (152)
T d1assa_ 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEA---------KVQISDPSKIQDFLNQETNTFKQM------- 64 (152)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHH---------HHHTSCGGGHHHHHHHHHHHHHHH-------
T ss_pred CeEEEEeCccCCCCCCccccCceEEEEecccccccccccc---------eeeeCCHHHHHHHHHHHHHHHHHH-------
Confidence 5799999999999999999999999999999999988776 788889999999999999999999
Q ss_pred HHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCccccccc
Q psy14945 248 TVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTAMNSVE 327 (629)
Q Consensus 248 Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i~~s~~ 327 (629)
+..|. ..++ .+ ++++++|++.+++||+++||++++++++++++|||++|||+++++++
T Consensus 65 -v~~I~-------------~~g~----nv----vl~~~~I~~~a~~~l~k~gI~~v~~v~~~dl~ria~atGa~iv~s~~ 122 (152)
T d1assa_ 65 -VEKIK-------------KSGA----NV----VLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLD 122 (152)
T ss_dssp -HHHHH-------------HTTC----SE----EEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTT
T ss_pred -HHHHH-------------hccc----ce----EEEeccccHHHHHHHHHcCCccccCCCHHHHHHHHHHhCCceeCCcc
Confidence 88887 4554 22 56899999999999999999999999999999999999999999999
Q ss_pred ccCcCCCcccceEEEEEEcCeeEEEEeecC
Q psy14945 328 GLEPAHLGYAGSVFEHVLGEEKFTFVEECK 357 (629)
Q Consensus 328 ~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~ 357 (629)
+++++.+|+|+.+++.+++++++++|+||+
T Consensus 123 ~l~~~~LG~~~~v~~~~ig~~~~~~~~GCk 152 (152)
T d1assa_ 123 DLTPSVLGEAETVEERKIGDDRMTFVMGCK 152 (152)
T ss_dssp SCCTTSCEEEEEEEEEEETTEEEEEEESCC
T ss_pred cCCcccCeeeeEEEEEEECCEEEEEEecCC
Confidence 999999999999999999999999999885
No 5
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.90 E-value=5.7e-24 Score=212.30 Aligned_cols=187 Identities=28% Similarity=0.457 Sum_probs=159.4
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcE
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGII 301 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~ 301 (629)
..||.++++.+..+.|+.++|||||+++.+.+++|+++..+|.. |+++..
T Consensus 53 ~~~~~a~~~~~~~~~~~~~~GDGttt~~vl~~~ll~~~~~~i~~--------------------G~~p~~---------- 102 (243)
T d1a6db1 53 VEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQ--------------------NVHPTV---------- 102 (243)
T ss_dssp CCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHT--------------------TCCHHH----------
T ss_pred ccchHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHc--------------------CCCHHH----------
Confidence 46999999999999999999999999999999999999987643 332210
Q ss_pred EEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHH
Q psy14945 302 ALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAV 381 (629)
Q Consensus 302 vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i 381 (629)
..+..++..
T Consensus 103 -----------------------------------------------------------------------I~~g~~~a~ 111 (243)
T d1a6db1 103 -----------------------------------------------------------------------ISEGYRMAS 111 (243)
T ss_dssp -----------------------------------------------------------------------HHHHHHHHH
T ss_pred -----------------------------------------------------------------------HHHHHHHHH
Confidence 012234444
Q ss_pred HhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhc
Q psy14945 382 RDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACG 461 (629)
Q Consensus 382 ~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~ 461 (629)
+++.+.++....+..+++|||++|+.++..+.+++.++++.+|+++++|++||+.||++|++|+|+|+.+++.+|+..|.
T Consensus 112 ~~~~~~L~~~a~~v~~~~ggGa~e~~~a~~l~~~a~~~~g~~q~~i~~~a~Ale~ip~~LaeNaG~d~~~~i~~l~~~h~ 191 (243)
T d1a6db1 112 EEAKRVIDEISTKIAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHA 191 (243)
T ss_dssp HHHHHHHHHHCEECEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccccccccCCCchhHHHHHHHhhhhhccCCHHHHHHHHHHHHhhccCccccccCCCChhHHHHHHHHHHh
Confidence 44555555555556688999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 462 EAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 462 ~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
. ++.++|+|..+|.+.|+.+.|||||+.||+++++.|+++|...+.|+
T Consensus 192 ~-~~~~~Gvd~~~g~i~d~~~~gV~dp~~vk~~ai~~A~e~a~~iL~iD 239 (243)
T d1a6db1 192 K-GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRID 239 (243)
T ss_dssp T-TCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEE
T ss_pred C-CCCceeEECcCCEEeehHhcccEecHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 66788999999999999999999999999999999999988776654
No 6
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.83 E-value=1.6e-21 Score=194.89 Aligned_cols=186 Identities=35% Similarity=0.524 Sum_probs=155.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcE
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGII 301 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~ 301 (629)
..||.++++++..+.|+.++|||||+++.+.+++|+++..|+.. |+++.
T Consensus 57 ~~~~~a~~~~~~~~~~~~~~GDGttt~ivla~~ll~~~~~ll~~--------------------G~~p~----------- 105 (245)
T d1a6da1 57 VEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQ--------------------GVHPT----------- 105 (245)
T ss_dssp CCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHH--------------------TCCHH-----------
T ss_pred hhhHHHHHHHHHHHhhHHhhcccchhhHHHHHHHHHHHHHHHHC--------------------CCCch-----------
Confidence 46999999999999999999999999999999999999998754 22220
Q ss_pred EEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHH
Q psy14945 302 ALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAV 381 (629)
Q Consensus 302 vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i 381 (629)
.+.+..+..+
T Consensus 106 ----------------------------------------------------------------------~i~~g~~~a~ 115 (245)
T d1a6da1 106 ----------------------------------------------------------------------VISNGYRLAV 115 (245)
T ss_dssp ----------------------------------------------------------------------HHHHHHHHHH
T ss_pred ----------------------------------------------------------------------hhhhhHHHHH
Confidence 0011123333
Q ss_pred HhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhc
Q psy14945 382 RDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACG 461 (629)
Q Consensus 382 ~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~ 461 (629)
++++..++...+ +.+++|||+.|++++..+.+++.++++.+++++++|++||+.||++|++|+|+|+++++.+++..|.
T Consensus 116 ~~a~~~L~~~a~-~~~v~g~ga~e~~l~~~l~~~a~~~~g~eq~a~~~~a~Ale~ip~~laeNaG~D~i~iv~~l~~~~~ 194 (245)
T d1a6da1 116 NEARKIIDEIAE-KSFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDE 194 (245)
T ss_dssp HHHHHHHHHHCE-ECEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc-ceeecCchhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhhhhhhhhccCCCCchhhhhhhhcccc
Confidence 444444433322 4488999999999999999999999999999999999999999999999999999999999998886
Q ss_pred CCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEEe
Q psy14945 462 EAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVIT 510 (629)
Q Consensus 462 ~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV~ 510 (629)
+ ++.++|+++.++.+.|+.+.|||||+.||+++++.|+++|...+.|+
T Consensus 195 ~-~~~~~Gv~~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~iD 242 (245)
T d1a6da1 195 K-GRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRID 242 (245)
T ss_dssp T-TCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred c-CCceeeEEccCCeEeehHhcCccccHHHHHHHHHHHHHHHHHHHhhc
Confidence 5 56789999999999999999999999999999999999988766554
No 7
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.83 E-value=3.7e-21 Score=191.72 Aligned_cols=107 Identities=19% Similarity=0.270 Sum_probs=99.9
Q ss_pred cCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHH
Q psy14945 502 SGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQD 581 (629)
Q Consensus 502 ~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~ 581 (629)
.+....+++|||++| ++++..|++++.++++++|++++ +|++||++||++||+|||+|+.+
T Consensus 121 ~a~~v~~~~ggGa~e-~~~a~~l~~~a~~~~g~~q~~i~------------------~~a~Ale~ip~~LaeNaG~d~~~ 181 (243)
T d1a6db1 121 ISTKIAYAAGGGATA-AEIAFRLRSYAQKIGGRQQLAIE------------------KFADAIEEIPRALAENAGLDPID 181 (243)
T ss_dssp HCEECEEEETTTHHH-HHHHHHHHHHHHHTCSSHHHHHH------------------HHHHHHTHHHHHHHHHHTCCHHH
T ss_pred hccccccccCCCchh-HHHHHHHhhhhhccCCHHHHHHH------------------HHHHHhhccCccccccCCCChhH
Confidence 345788999999999 99999999999999999999999 47777888999999999999999
Q ss_pred HHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 582 TLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 582 ~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
++.+||..|.+ ++.++|+|+.+|++.||.+.|||||+.||+|+|++
T Consensus 182 ~i~~l~~~h~~-~~~~~Gvd~~~g~i~d~~~~gV~dp~~vk~~ai~~ 227 (243)
T d1a6db1 182 ILLKLRAEHAK-GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIES 227 (243)
T ss_dssp HHHHHHHHHHT-TCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCceeEECcCCEEeehHhcccEecHHHHHHHHHH
Confidence 99999999987 77899999999999999999999999999999975
No 8
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.74 E-value=2.3e-18 Score=173.01 Aligned_cols=185 Identities=33% Similarity=0.502 Sum_probs=147.0
Q ss_pred ccccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcE
Q psy14945 222 IQHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGII 301 (629)
Q Consensus 222 ~~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~ 301 (629)
..||.++++.+..+.|++++|||||+++.+++++|+++..+++. |+++...
T Consensus 66 ~~~~~a~~~~~~a~~~~~~~GDGttt~~vLa~~ll~~~~~li~~--------------------G~~p~~i--------- 116 (258)
T d1q3qa1 66 LQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQ--------------------NIHPSII--------- 116 (258)
T ss_dssp CCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHT--------------------TCCHHHH---------
T ss_pred hhHHHHHHHHHHHHHHHHHHccccchhHHhHHHHHhhhHHHHhc--------------------CCChhHH---------
Confidence 36999999999999999999999999999999999999998754 1211100
Q ss_pred EEeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHH
Q psy14945 302 ALRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAV 381 (629)
Q Consensus 302 vv~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i 381 (629)
.+.++...
T Consensus 117 ------------------------------------------------------------------------~~g~~~a~ 124 (258)
T d1q3qa1 117 ------------------------------------------------------------------------TKGYALAA 124 (258)
T ss_dssp ------------------------------------------------------------------------HHHHHHHH
T ss_pred ------------------------------------------------------------------------HHHHHHHH
Confidence 00001111
Q ss_pred HhhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhc
Q psy14945 382 RDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACG 461 (629)
Q Consensus 382 ~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~ 461 (629)
++++..++....+ .++|+||+.|++.+..+.+++..+.+.++++++.|++||+.+|+++++|+|+|+++++.+++..|.
T Consensus 125 ~~~~~~l~~~~~~-~~~~~~g~~ei~~a~~l~~~a~~~~~~~~~a~~~~a~Al~~Ip~~la~N~G~d~i~~v~~l~~~~~ 203 (258)
T d1q3qa1 125 EKAQEILDEIAIR-AVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHK 203 (258)
T ss_dssp HHHHHHHHHHCEE-EEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh-hccCCCchHHHHHHHHHHhhhcccchHHHHHHHHHHHhccchhhhhhhhcCCccceehhhhhhhcc
Confidence 1111111111111 267999999999999999999999999999999999999999999999999999999999988776
Q ss_pred CCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEE
Q psy14945 462 EAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVI 509 (629)
Q Consensus 462 ~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV 509 (629)
. ++.+.|++..+|.+.|+.++|+|||+.|+.++++.|++++...+.+
T Consensus 204 ~-~~~~~gvdv~~G~~~D~~~~Gii~p~~vk~~~l~~A~e~a~~IL~i 250 (258)
T d1q3qa1 204 N-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRI 250 (258)
T ss_dssp H-HCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred c-CCCceEEEEECCEEeEchHcCccccHHHHHHHHHHHHHHhCcceeE
Confidence 4 4567899999999999999999999999999999888877554443
No 9
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.71 E-value=3e-18 Score=170.93 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=97.2
Q ss_pred CCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHH
Q psy14945 505 HPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLV 584 (629)
Q Consensus 505 ~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~ 584 (629)
.+.+++|||+.| ++++..|.+++.+.++++|++++ +|++||+.||++||+|+|+|+++++.
T Consensus 127 ~~~~v~g~ga~e-~~l~~~l~~~a~~~~g~eq~a~~------------------~~a~Ale~ip~~laeNaG~D~i~iv~ 187 (245)
T d1a6da1 127 EKSFLWGGGAVE-AELAMRLAKYANSVGGREQLAIE------------------AFAKALEIIPRTLAENAGIDPINTLI 187 (245)
T ss_dssp EECEEETTTHHH-HHHHHHHHHHHHTSCHHHHHHHH------------------HHHHHHTHHHHHHHHHHTSCHHHHHH
T ss_pred cceeecCchhHH-HHHHHHHHHHHhccCCHHHHHHH------------------HHHHHHhhhhhhhhccCCCCchhhhh
Confidence 578999999999 99999999999999999999998 46677888999999999999999999
Q ss_pred HHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 585 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 585 ~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|+..|.+ ++.++|+|+.+|.+.||.+.|||||+.||+|+|++
T Consensus 188 ~l~~~~~~-~~~~~Gv~~~~g~i~d~~~~gV~dp~~vk~~~l~~ 230 (245)
T d1a6da1 188 KLKADDEK-GRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALES 230 (245)
T ss_dssp HHHHHHHT-TCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHH
T ss_pred hhhccccc-CCceeeEEccCCeEeehHhcCccccHHHHHHHHHH
Confidence 99999987 67899999999999999999999999999999975
No 10
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=99.60 E-value=1.7e-15 Score=151.64 Aligned_cols=183 Identities=21% Similarity=0.316 Sum_probs=153.1
Q ss_pred cccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEE
Q psy14945 223 QHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIA 302 (629)
Q Consensus 223 ~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~v 302 (629)
.|+.++++.+....+++..|||||+.+.++.++++++..++. .|.++
T Consensus 65 e~~~a~~~~~~~~~~~~~~gDgttt~~vl~~~~l~~~~~~i~--------------------~G~~~------------- 111 (255)
T d1we3a1 65 ENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVA--------------------AGANP------------- 111 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHH--------------------TTCCH-------------
T ss_pred hhhHHHHHHHhhhhhHHHhhcchhHHHHHHHHHHHhhhhHHh--------------------cCCcc-------------
Confidence 588999999999999999999999999998876654444321 11111
Q ss_pred EeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHH
Q psy14945 303 LRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVR 382 (629)
Q Consensus 303 v~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~ 382 (629)
....+++++++.
T Consensus 112 --------------------------------------------------------------------~~i~~g~~~a~~ 123 (255)
T d1we3a1 112 --------------------------------------------------------------------LALKRGIEKAVE 123 (255)
T ss_dssp --------------------------------------------------------------------HHHHHHHHHHHH
T ss_pred --------------------------------------------------------------------chhhhhhhhhhH
Confidence 123556889999
Q ss_pred hhHHHHHHHhhCCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC
Q psy14945 383 DGLRAIKNTIDDGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE 462 (629)
Q Consensus 383 dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~ 462 (629)
++++.++...++..++||||+.++.++..+..+.....+.+++++++|++||+.||+++++|+|+++..........+
T Consensus 124 ~al~~l~~~~~~~~~v~ggg~~~~~~~~~~~~~~~~~~g~~~~g~~iva~Al~~~~~~~~~nag~~~~~~~~~~~~~~-- 201 (255)
T d1we3a1 124 AAVEKIKALAIPVGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAET-- 201 (255)
T ss_dssp HHHHHHHHTCBCCCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHhhhcceeccchhhhhhhhhhhHhhccCCChHHHHHHHHHHHHHhhhHHHHHhhcccccceeeeeeeecc--
Confidence 999999988888889999999999999999988888888899999999999999999999999999988777766544
Q ss_pred CCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCCCeEE
Q psy14945 463 APGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLHPRVI 509 (629)
Q Consensus 463 ~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~~~iV 509 (629)
.+.++|++..+|.+.|+.++||+||+.|++++++.|++++...+++
T Consensus 202 -~~~~~g~d~~~g~~~D~~e~Giidp~~V~~~a~~~A~~~a~~iL~~ 247 (255)
T d1we3a1 202 -KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTT 247 (255)
T ss_dssp -SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred -cCCceeEEeeccEEeehhhcCCcCchHhhHHHHHHHHHHhchHhhc
Confidence 2356899999999999999999999999999999888876654443
No 11
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=99.54 E-value=5.5e-15 Score=140.03 Aligned_cols=171 Identities=23% Similarity=0.324 Sum_probs=123.7
Q ss_pred cccHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEE
Q psy14945 223 QHPTASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIA 302 (629)
Q Consensus 223 ~~~~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~v 302 (629)
.|.-++|+.+.+..+++++|||||+.+.+..+++.++..++.. |.++.
T Consensus 4 e~~ga~lv~~~a~~~~~~~GDGTTTatVLa~~i~~e~~~~i~~--------------------g~~p~------------ 51 (180)
T d1sjpa1 4 EKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAA--------------------GANPL------------ 51 (180)
T ss_dssp HHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHHT--------------------TCCHH------------
T ss_pred hhHhHHHHHHHHHhhHHHcCCCchHHHHHHHHHHHHHHHHhhC--------------------CCChH------------
Confidence 4678999999999999999999999999999888777665432 12110
Q ss_pred EeccchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHH
Q psy14945 303 LRRAKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVR 382 (629)
Q Consensus 303 v~~v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~ 382 (629)
++++.++
T Consensus 52 -------------------------------------------------------------------------~i~~Gi~ 58 (180)
T d1sjpa1 52 -------------------------------------------------------------------------GLKRGIE 58 (180)
T ss_dssp -------------------------------------------------------------------------HHHHHHH
T ss_pred -------------------------------------------------------------------------HHHhhHH
Confidence 2233444
Q ss_pred hhHHHHHHHhhCC-CcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhc
Q psy14945 383 DGLRAIKNTIDDG-AVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACG 461 (629)
Q Consensus 383 dal~vv~~~~~~~-~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~ 461 (629)
++...+...+++. ..++|||...+.....+. +....+.+++++++|++||+.|++++++|+|.++..++.+++..+
T Consensus 59 ~A~~~v~~~L~~~a~~v~g~~~~~l~a~~al~--~~~~~~~e~~g~~i~~~Al~~p~~~I~~NaG~~~~~v~~~~~~~~- 135 (180)
T d1sjpa1 59 KAVEKVTETLLKGAKIVAGGGVTLLQAAPTLD--ELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP- 135 (180)
T ss_dssp HHHHHHHHHHHHTCBEEETTTTTTTTTGGGGG--GSCCCTHHHHHHHHHHHHTTHHHHHHHHTTTSCHHHHHHHHHTSC-
T ss_pred HHHHHHHHHHHHHHhhhcchhhhHHHHHHHHh--hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhccc-
Confidence 4444444444433 467888877665443332 234566799999999999999999999999999999998886532
Q ss_pred CCCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcCCC
Q psy14945 462 EAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISGLH 505 (629)
Q Consensus 462 ~~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a~~ 505 (629)
.++|+|..++.+.|+++.||+||..|++++|+.|+++|..
T Consensus 136 ----~~~G~d~~~~~~~dm~e~GIiDP~kV~~~AL~~A~s~a~~ 175 (180)
T d1sjpa1 136 ----AGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGL 175 (180)
T ss_dssp ----TTEECCTTTCCCEETTTTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred ----cccCccccccccccHHHcCCcCcHHHHHHHHHhHHHHHHH
Confidence 4689999999999999999999999999999999987754
No 12
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.49 E-value=1.2e-14 Score=145.66 Aligned_cols=104 Identities=21% Similarity=0.328 Sum_probs=95.0
Q ss_pred CCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHH
Q psy14945 505 HPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLV 584 (629)
Q Consensus 505 ~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~ 584 (629)
...++|+||+.| ++.+..+..++....+.++++++ +|++||+.||++|++|+|+|+++++.
T Consensus 136 ~~~~~~~~g~~e-i~~a~~l~~~a~~~~~~~~~a~~------------------~~a~Al~~Ip~~la~N~G~d~i~~v~ 196 (258)
T d1q3qa1 136 IRAVLPAGGAPE-IELAIRLDEYAKQVGGKEALAIE------------------NFADALKIIPKTLAENAGLDTVEMLV 196 (258)
T ss_dssp EEEEEECTTHHH-HHHHHHHHHHHHHHCHHHHHHHH------------------HHHHHTTHHHHHHHHHTTCCHHHHHH
T ss_pred hhhccCCCchHH-HHHHHHHHhhhcccchHHHHHHH------------------HHHHhccchhhhhhhhcCCccceehh
Confidence 346789999999 99999999999999999999888 46777888999999999999999999
Q ss_pred HHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhhc
Q psy14945 585 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINS 628 (629)
Q Consensus 585 ~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~~ 628 (629)
+|+..|.. ++.++|+|+.+|.+.||.+.|||||+.||.|++++
T Consensus 197 ~l~~~~~~-~~~~~gvdv~~G~~~D~~~~Gii~p~~vk~~~l~~ 239 (258)
T d1q3qa1 197 KVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKS 239 (258)
T ss_dssp HHHHHHHH-HCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHH
T ss_pred hhhhhccc-CCCceEEEEECCEEeEchHcCccccHHHHHHHHHH
Confidence 99999976 57889999999999999999999999999999864
No 13
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=99.39 E-value=5.9e-13 Score=132.85 Aligned_cols=105 Identities=16% Similarity=0.258 Sum_probs=92.9
Q ss_pred hcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHH
Q psy14945 501 ISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQ 580 (629)
Q Consensus 501 e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~ 580 (629)
+.+....++||||+.+ ..++..++.++...++++|++++++++| |+.+|+++++|+|+++.
T Consensus 131 ~~~~~~~~v~ggg~~~-~~~~~~~~~~~~~~~g~~~~g~~iva~A------------------l~~~~~~~~~nag~~~~ 191 (255)
T d1we3a1 131 ALAIPVGIVPGGGVTL-LRAISAVEELIKKLEGDEATGAKIVRRA------------------LEEPARQIAENAGYEGS 191 (255)
T ss_dssp HTCBCCCEEETTTHHH-HHHHHHHHHHHTTCCHHHHHHHHHHHHH------------------TTHHHHHHHHHHTSCHH
T ss_pred HHhhhcceeccchhhh-hhhhhhhHhhccCCChHHHHHHHHHHHH------------------HhhhHHHHHhhcccccc
Confidence 4456889999999999 9999999999999999999999965554 55588999999999999
Q ss_pred HHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 581 DTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 581 ~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
.++.++...| .+.++|+|+.+|.+.||.+.|||||+.|+.++++
T Consensus 192 ~~~~~~~~~~---~~~~~g~d~~~g~~~D~~e~Giidp~~V~~~a~~ 235 (255)
T d1we3a1 192 VIVQQILAET---KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQ 235 (255)
T ss_dssp HHHHHHHHCC---SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHH
T ss_pred eeeeeeeecc---cCCceeEEeeccEEeehhhcCCcCchHhhHHHHH
Confidence 9988887766 3467999999999999999999999999999986
No 14
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=99.26 E-value=1.1e-12 Score=123.91 Aligned_cols=113 Identities=16% Similarity=0.249 Sum_probs=86.6
Q ss_pred ccccchhhHHHHHhhhhhhcCCCCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCC
Q psy14945 483 AGIYDNLTVKRQIINSWIISGLHPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPN 562 (629)
Q Consensus 483 ~~I~D~~~Vk~~~l~~a~e~a~~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~ 562 (629)
+|+.++.......|+ .....++|||... ..+...+.. .+.+++++.++++++.||+.
T Consensus 55 ~Gi~~A~~~v~~~L~------~~a~~v~g~~~~~-l~a~~al~~--~~~~~~e~~g~~i~~~Al~~-------------- 111 (180)
T d1sjpa1 55 RGIEKAVEKVTETLL------KGAKIVAGGGVTL-LQAAPTLDE--LKLEGDEATGANIVKVALEA-------------- 111 (180)
T ss_dssp HHHHHHHHHHHHHHH------HTCBEEETTTTTT-TTTGGGGGG--SCCCTHHHHHHHHHHHHTTH--------------
T ss_pred hhHHHHHHHHHHHHH------HHHhhhcchhhhH-HHHHHHHhh--hhhhhHHHHHHHHHHHHHHH--------------
Confidence 344444444444444 3557899888766 554444443 35678899999987766665
Q ss_pred chhHHHHHhHHhcCCCHHHHHHHHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 563 SVPSLRNSATVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 563 al~~IP~~La~NaG~d~~~~l~~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+|++|++|||+|+..++.+++.. ..++|+|..+|+++||++.||+||++|+++||+
T Consensus 112 ----p~~~I~~NaG~~~~~v~~~~~~~-----~~~~G~d~~~~~~~dm~e~GIiDP~kV~~~AL~ 167 (180)
T d1sjpa1 112 ----PLKQIAFNSGLEPGVVAEKVRNL-----PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQ 167 (180)
T ss_dssp ----HHHHHHHTTTSCHHHHHHHHHTS-----CTTEECCTTTCCCEETTTTTCEEEHHHHHHHHH
T ss_pred ----HHHHHHHhcCCCchhhhhhhhcc-----ccccCccccccccccHHHcCCcCcHHHHHHHHH
Confidence 66999999999999999998643 357999999999999999999999999999986
No 15
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=99.17 E-value=4.7e-12 Score=118.23 Aligned_cols=74 Identities=24% Similarity=0.353 Sum_probs=58.8
Q ss_pred CceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccCCCC---cccCc-chhhhHHHhcCchhhhhhhhccccc
Q psy14945 14 DSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGP---WCATP-GHAQVREERAHPDMQHQHGIREEGV 87 (629)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~---~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~ 87 (629)
||+||+|+|+|+...|++||++++||+||++|++|||+|++.++ +.+.+ .+++.+.|+++++++++++..-+.-
T Consensus 1 DS~li~Gvvi~k~~~~~~m~~~i~~~kIlll~~~le~~~~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~ 78 (168)
T d1gmla_ 1 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 78 (168)
T ss_dssp CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CcEEEEEEEEecccCCcCCccccCCceEEEEeccccccccccccceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 89999999999999999999999999999999999999999665 44544 4999999999999999998765443
No 16
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.03 E-value=5.9e-11 Score=108.91 Aligned_cols=70 Identities=27% Similarity=0.333 Sum_probs=61.3
Q ss_pred eEEEecCCCCCCCCcccccceEEEEeecccceeccCCCC---ccc-CcchhhhHHHhcCchhhhhhhhcccccc
Q psy14945 19 KGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGP---WCA-TPGHAQVREERAHPDMQHQHGIREEGVV 88 (629)
Q Consensus 19 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~---~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 88 (629)
||+|+||...|++||++++||+||++|++|||+|++.+. +.+ ++.+++.++|+++++++++++..-+.-+
T Consensus 1 kGvv~~k~~~~~~mp~~i~n~kIlll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~nv 74 (153)
T d1q3qa2 1 RGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 74 (153)
T ss_dssp SSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred CeEEEeCCCCCccCCcccCCccEEEEecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 799999999999999999999999999999999999655 555 4449999999999999998887655444
No 17
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.01 E-value=1.2e-10 Score=106.66 Aligned_cols=69 Identities=20% Similarity=0.214 Sum_probs=60.3
Q ss_pred EEEecCCCCCCCCcccccceEEEEeecccceeccCCCC---cccCcc-hhhhHHHhcCchhhhhhhhcccccc
Q psy14945 20 GVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGP---WCATPG-HAQVREERAHPDMQHQHGIREEGVV 88 (629)
Q Consensus 20 g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~---~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~ 88 (629)
|+|+|++..|++|||+++||+||++|++|||+|++.+. +.+.+. ++..++|+++++++++++..-+.-+
T Consensus 1 Gvv~~k~~~~~~mpk~i~~~kIlll~~~Le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~nv 73 (152)
T d1a6db2 1 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 73 (152)
T ss_dssp EEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CEEEeccCCCCCCCCcccCCcEEEEecccccccccccceeeecCHHHHHHHHHHHHHHHHHHHHHHhccCCce
Confidence 89999999999999999999999999999999999655 556444 9999999999999999887655433
No 18
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=98.96 E-value=9.9e-11 Score=107.26 Aligned_cols=71 Identities=21% Similarity=0.266 Sum_probs=62.2
Q ss_pred EeEEEecCCCCCCCCcccccceEEEEeecccceeccCCCC---cccCcc-hhhhHHHhcCchhhhhhhhcccccc
Q psy14945 18 VKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSGSGP---WCATPG-HAQVREERAHPDMQHQHGIREEGVV 88 (629)
Q Consensus 18 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~~~~---~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~ 88 (629)
|+|+|+|+...|++||++++||+|+++|++|||+|++.++ +.+.+. ++..+.|+++++++++++..-+.-+
T Consensus 1 i~Gvv~~k~~~~~~mp~~i~~~kI~ll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~nv 75 (152)
T d1assa_ 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANV 75 (152)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred CeEEEEeCccCCCCCCccccCceEEEEecccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcccce
Confidence 6899999999999999999999999999999999998544 666444 9999999999999999988655433
No 19
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=98.95 E-value=3e-11 Score=104.07 Aligned_cols=95 Identities=9% Similarity=-0.037 Sum_probs=74.3
Q ss_pred HHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCC
Q psy14945 102 VKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARH 179 (629)
Q Consensus 102 ~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~ 179 (629)
+.++. .|+.++|..+ .++|+.++|+|+..-.-.. ......++.+++|.+++||++.||++++|++|++ |
T Consensus 9 L~~va-~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~-----~~~~~~d~~~Iki~K~~Ggsv~dS~lv~G~vl~k---~ 79 (107)
T d1q3qa3 9 LLKIA-ATSITGKNAESHKELLAKLAVEAVKQVAEKK-----DGKYVVDLDNIKFEKKAGEGVEESELVKAVTILI---R 79 (107)
T ss_dssp HHHHH-HHHSCSSTTGGGHHHHHHHHHHHHHHHCEES-----SSSEECCGGGEEEEEEEBSCGGGCEEESSEEEEE---E
T ss_pred HHHHH-HHHhccccchhHHHHHHHHHHHHHHHhhccc-----CCCcccchHHEEEEEecCCChhhCEEEccEEEEc---c
Confidence 44444 5777888876 6899999999998631000 0111346778999999999999999999999997 5
Q ss_pred CCCcccccCeeEEEeecccccccccc
Q psy14945 180 PDMPKSVKNAHILTCNISMEYEKSSQ 205 (629)
Q Consensus 180 ~~m~~~i~n~kIll~~~~Le~~k~~~ 205 (629)
+.||+.++|+||+++||+|++...+.
T Consensus 80 ~~mp~~i~n~ki~lld~~le~~~~~~ 105 (107)
T d1q3qa3 80 GGTEHVIDEVERALEDAVKVVKDVME 105 (107)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCcCEeeccCcHHHHhhcc
Confidence 78999999999999999999865543
No 20
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.95 E-value=1.1e-09 Score=108.39 Aligned_cols=103 Identities=22% Similarity=0.229 Sum_probs=84.7
Q ss_pred cccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcCCCCceEEEEeccCC
Q psy14945 397 VVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGEAPGVAVGVDVNSGE 476 (629)
Q Consensus 397 VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~~~~~~~Gid~~t~~ 476 (629)
+++|||...+.++..+... ....+.++.++..+.+|++.+.+.+++|+|.++..++++.... ...+.|+++.+++
T Consensus 137 i~~~g~~al~~~~~~l~~~-~~~~~d~~~G~~iv~~Al~~p~~~i~~naG~dg~~vv~~~~~~----~~~~~g~~~~~~~ 211 (252)
T d1ioka1 137 IVVGGGVALVQGAKVLEGL-SGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRES----SDKAFGFNAQTEE 211 (252)
T ss_dssp EEETTTHHHHHHGGGGGSC-CCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSC----CSTTEEEETTTTE
T ss_pred CCCchHHhhHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHHHHHhccCCCcceEEEeeccc----CcCCEEEEceeee
Confidence 8899999888776555332 1223457899999999999999999999999999999887543 2357899999999
Q ss_pred CCCCCcccccchhhHHHHHhhhhhhcCC
Q psy14945 477 VLNPTSAGIYDNLTVKRQIINSWIISGL 504 (629)
Q Consensus 477 i~d~~e~~I~D~~~Vk~~~l~~a~e~a~ 504 (629)
+.|++++||.||+.|.+.+|+.|++.+.
T Consensus 212 ~g~~~~~GiidP~kVt~~al~~A~sva~ 239 (252)
T d1ioka1 212 YGDMFKFGVIDPAKVVRTALEDAASVAG 239 (252)
T ss_dssp EEEHHHHTCEEEHHHHHHHHHHHHHHHH
T ss_pred EeeeecccccCcHHHHHHHHHHHHhhhh
Confidence 9999999999999999999998875543
No 21
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=98.88 E-value=1.2e-10 Score=99.72 Aligned_cols=95 Identities=11% Similarity=0.001 Sum_probs=73.7
Q ss_pred HHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEEeccCCC
Q psy14945 102 VKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVLNHGARH 179 (629)
Q Consensus 102 ~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~~~~~~~ 179 (629)
+..+. .|+.++|..+ .++|+.++|+|+..-.-.+ | .....++.+|+|.+++||++.||++++|+++++ |
T Consensus 6 L~~va-~Tsl~~K~~~~~~d~ls~l~vdAv~~v~~~~--~---g~~~~d~~~I~i~k~~Ggs~~dS~lv~G~vl~k---~ 76 (105)
T d1a6da3 6 LRKIA-LTALSGKNTGLSNDFLADLVVKAVNAVAEVR--D---GKTIVDTANIKVDKKNGGSVNDTQFISAVSILI---R 76 (105)
T ss_dssp HHHHH-HHHTTTSSCCSTHHHHHHHHHHHHHHHCEES--S---SSEECCGGGEEEEECCCSCSTTCEEESCEEEEE---C
T ss_pred HHHHH-HHhhccccchHHHHHHHHHHHHHHHHhcccc--C---CCceecHHHhhhhhccCCChhheeeeeccceec---c
Confidence 34444 5777888875 5889999999987521000 0 011356788999999999999999999999986 6
Q ss_pred CCCcccccCeeEEEeecccccccccc
Q psy14945 180 PDMPKSVKNAHILTCNISMEYEKSSQ 205 (629)
Q Consensus 180 ~~m~~~i~n~kIll~~~~Le~~k~~~ 205 (629)
+.||+.++|+||++++++++..+++.
T Consensus 77 ~~mp~~~~~~kialld~~~~~~~te~ 102 (105)
T d1a6da3 77 GGTDHVVSEVERALNDAIRVVAITKE 102 (105)
T ss_dssp CSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCcCeeEecchhhcccccc
Confidence 89999999999999999998866654
No 22
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=98.85 E-value=1.4e-08 Score=100.39 Aligned_cols=166 Identities=19% Similarity=0.281 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHhhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEec
Q psy14945 226 TASLIARASTAMDDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRR 305 (629)
Q Consensus 226 ~akll~~e~~~~~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~ 305 (629)
.++++.+.+..+++.+|||||+++.+..++|+++..++.. |+++..
T Consensus 69 ~a~~~~~~a~~~~~~~GDgttt~~vla~~ll~~~~~~i~~--------------------G~~p~~-------------- 114 (252)
T d1kp8a1 69 GAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAA--------------------GMNPMD-------------- 114 (252)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHT--------------------TCCHHH--------------
T ss_pred HHHHHHHHHHhhhHHhccccchhHHHHHHHHHHHHHHHHc--------------------CCcchh--------------
Confidence 7889999999999999999999999999988777775532 222200
Q ss_pred cchhhHHHHHHHhCCcccccccccCcCCCcccceEEEEEEcCeeEEEEeecCCCccEEEEecCCCccCHHHHHHHHHhhH
Q psy14945 306 AKRRNMERLSLACGGTAMNSVEGLEPAHLGYAGSVFEHVLGEEKFTFVEECKNPQSVTILLKGPNKHTLAQTKDAVRDGL 385 (629)
Q Consensus 306 v~~~dl~rIak~tGg~i~~s~~~l~~~~lG~~~~v~e~~i~~~~~~~~~~~~~~~~~TIll~g~~~~~l~e~~r~i~dal 385 (629)
+++.+..+.
T Consensus 115 -----------------------------------------------------------------------i~~gi~~a~ 123 (252)
T d1kp8a1 115 -----------------------------------------------------------------------LKRGIDKAV 123 (252)
T ss_dssp -----------------------------------------------------------------------HHHHHHHHH
T ss_pred -----------------------------------------------------------------------hhhhhhhHH
Confidence 222333333
Q ss_pred HHHHHHhh---CCCcccCCChHHHHHHHHHHhhhhhcCcchHHHHHHHHHHHhhhhHHHHHhcCCChHHHHHHHHHhhcC
Q psy14945 386 RAIKNTID---DGAVVPGAGAFEVAAWHALQNYKNTVKGKSRLGIQAYAEALLIIPKTIAVNSGFDAQDTLVKLQEACGE 462 (629)
Q Consensus 386 ~vv~~~~~---~~~VV~GGG~~El~l~~~L~~~~~~i~~~~k~~i~~fa~ALe~ip~~L~~NaG~d~~~vl~~L~~~~~~ 462 (629)
..+...++ .+ +.+|++....+.+..+.... ...+.++.+...+.+||+.+.+++++|+|.++..++..+....
T Consensus 124 ~~v~~~L~~~s~~-i~~~~~~~~v~~~~~~~~~k-~~n~d~~iG~~Iv~~Al~~p~~~i~~nag~~g~~~~~~v~~~~-- 199 (252)
T d1kp8a1 124 TVAVEELKALSVG-VVAGGGVALIRVASKLADLR-GQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGD-- 199 (252)
T ss_dssp HHHHHHHHHHCBC-EEETTTHHHHHHHHHTTTCC-CSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHSC--
T ss_pred HHHHHHHHhccee-eccCchhhhhHHHHHhhhhc-ccCccHHHhHHHHHHHHHHHHHHHHHhhhhcccccceeeeecC--
Confidence 33333332 24 78888888887765553222 1234578999999999999999999999999999888876432
Q ss_pred CCCceEEEEeccCCCCCCCcccccchhhHHHHHhhhhhhcC
Q psy14945 463 APGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIINSWIISG 503 (629)
Q Consensus 463 ~~~~~~Gid~~t~~i~d~~e~~I~D~~~Vk~~~l~~a~e~a 503 (629)
...|++..++.+.+++++|+.||+.|.+.+++.|...+
T Consensus 200 ---~~~g~~~~~~~~g~~~~~G~idP~~Vt~~al~~a~~~~ 237 (252)
T d1kp8a1 200 ---GNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVA 237 (252)
T ss_dssp ---TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred ---CCeeEEEEEEEEEEEEeeccCCcceeccHhhhhheecc
Confidence 35799999999999999999999999999998766443
No 23
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=98.84 E-value=4.6e-11 Score=102.38 Aligned_cols=51 Identities=6% Similarity=-0.021 Sum_probs=49.0
Q ss_pred CceEeecCCCCCCCceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccC
Q psy14945 1 MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSG 54 (629)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~ 54 (629)
+|+|+|++|++.+||+||+|+||++ ||+||++++||+|+++++.||+.++|
T Consensus 51 ~I~i~k~~Ggs~~dS~lv~G~vl~k---~~~mp~~~~~~kialld~~~~~~~te 101 (105)
T d1a6da3 51 NIKVDKKNGGSVNDTQFISAVSILI---RGGTDHVVSEVERALNDAIRVVAITK 101 (105)
T ss_dssp GEEEEECCCSCSTTCEEESCEEEEE---CCSSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhccCCChhheeeeeccceec---cCCCCcccCCcCeeEecchhhccccc
Confidence 5899999999999999999999987 99999999999999999999999987
No 24
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=98.72 E-value=2e-10 Score=98.66 Aligned_cols=91 Identities=12% Similarity=0.024 Sum_probs=67.8
Q ss_pred HHHHhHhhhhcccccc--hhhHHHHHHHHHhhhcCCCCCCCCCccccccccceeEEEecCCCccceEEEEeEEE-----e
Q psy14945 102 VKNAHILTCNISMEYE--KSDVCIILVKGVVLNHGARHPDMPKSVKNAHILTCNISMEYEKSDVCIILVKGVVL-----N 174 (629)
Q Consensus 102 ~~~~~~~~~~~s~~~~--~~~i~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~i~i~~i~Ggs~~dS~li~Gvv~-----~ 174 (629)
+..+. .|+.+||-.+ .++|+.++|+|+..-.... ......++.+|+|.+++||++.||+|++|+++ +
T Consensus 8 L~~va-~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~-----~~~~~~d~~~IkI~k~~Ggs~~dS~li~G~v~~~~~~~ 81 (107)
T d1a6db3 8 LLKMA-QTSLNSKSASVAKDKLAEISYEAVKSVAELR-----DGKYYVDFDNIQVVKKQGGAIDDTQLINKAVSILVRGE 81 (107)
T ss_dssp HHHHH-HHHHTTSGGGGGHHHHHHHHHHHHHHHEEEC-----SSSEEECGGGEEEEEEESSCGGGCEEESSCEEEEEEES
T ss_pred HHHHH-HHhhcccccchHHHHHHHHHHHHHHHhhccc-----CCCcccCHHHeEEEeecCCChhhcEEEeccceeeccCC
Confidence 44444 5677887765 5789999999997521000 00113456789999999999999999999777 4
Q ss_pred ccCCCCCCcccccCeeEEEeecccc
Q psy14945 175 HGARHPDMPKSVKNAHILTCNISME 199 (629)
Q Consensus 175 ~~~~~~~m~~~i~n~kIll~~~~Le 199 (629)
+...+++||++++|+ |+|++|+||
T Consensus 82 k~~~~~~Mpk~i~n~-I~lld~~LE 105 (107)
T d1a6db3 82 TEHVVDEMERSITDS-LHVVASALE 105 (107)
T ss_dssp SHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ceeccCCCCccccCc-EEEEecCCc
Confidence 445568999999998 999999996
No 25
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=98.66 E-value=1.5e-10 Score=99.60 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=48.1
Q ss_pred CceEeecCCCCCCCceeEeEEEecCCCCCCCCcccccceEEEEeecccceeccC
Q psy14945 1 MVELMEMKHKTPGDSCLVKGVVLDHGARHPDMPKSVKNAHILTCNISMEYEKSG 54 (629)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~e~~k~~ 54 (629)
+|+|.|+.|++.+||+||+|+||++ ||+||++++||+|+++|+.|||..++
T Consensus 54 ~Iki~K~~Ggsv~dS~lv~G~vl~k---~~~mp~~i~n~ki~lld~~le~~~~~ 104 (107)
T d1q3qa3 54 NIKFEKKAGEGVEESELVKAVTILI---RGGTEHVIDEVERALEDAVKVVKDVM 104 (107)
T ss_dssp GEEEEEEEBSCGGGCEEESSEEEEE---EESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HEEEEEecCCChhhCEEEccEEEEc---cCCCCcccCCcCEeeccCcHHHHhhc
Confidence 4889999999999999999999986 99999999999999999999998765
No 26
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=98.56 E-value=2.1e-10 Score=98.54 Aligned_cols=48 Identities=15% Similarity=0.300 Sum_probs=43.0
Q ss_pred CceEeecCCCCCCCceeEeEEEe---cCCCCC--CCCcccccceEEEEeecccc
Q psy14945 1 MVELMEMKHKTPGDSCLVKGVVL---DHGARH--PDMPKSVKNAHILTCNISME 49 (629)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~--~~~~~~~~~~~i~~~~~~~e 49 (629)
+|+|+|++|++.+||+||+|+|+ +|+.+| |+|||+++|| |+++|++||
T Consensus 53 ~IkI~k~~Ggs~~dS~li~G~v~~~~~~~k~~~~~~Mpk~i~n~-I~lld~~LE 105 (107)
T d1a6db3 53 NIQVVKKQGGAIDDTQLINKAVSILVRGETEHVVDEMERSITDS-LHVVASALE 105 (107)
T ss_dssp GEEEEEEESSCGGGCEEESSCEEEEEEESSHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HeEEEeecCCChhhcEEEeccceeeccCCceeccCCCCccccCc-EEEEecCCc
Confidence 48999999999999999999555 666665 9999999999 999999998
No 27
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.50 E-value=4.2e-08 Score=96.78 Aligned_cols=99 Identities=20% Similarity=0.291 Sum_probs=80.5
Q ss_pred CCeEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHH
Q psy14945 505 HPRVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLV 584 (629)
Q Consensus 505 ~~~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~ 584 (629)
...+++|| ..++..++..|.... ..+++++.+++++.+|+.+|+ +++++|+|.|+..++.
T Consensus 134 a~~i~~~g-~~al~~~~~~l~~~~-~~~~d~~~G~~iv~~Al~~p~------------------~~i~~naG~dg~~vv~ 193 (252)
T d1ioka1 134 ARGIVVGG-GVALVQGAKVLEGLS-GANSDQDAGIAIIRRALEAPM------------------RQIAENAGVDGAVVAG 193 (252)
T ss_dssp CBCEEETT-THHHHHHGGGGGSCC-CSSHHHHHHHHHHHHHTTHHH------------------HHHHHHHTSCHHHHHH
T ss_pred cCCCCCch-HHhhHHHHHHHHhhh-cccchHHHHHHHHHHHHHHHH------------------HHHHhccCCCcceEEE
Confidence 45677755 555577777665542 345678999999999998876 7899999999999998
Q ss_pred HHHHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 585 KLQEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 585 ~L~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+.+.. ...++|+|..+++++||++.||+||++|++.++.
T Consensus 194 ~~~~~----~~~~~g~~~~~~~~g~~~~~GiidP~kVt~~al~ 232 (252)
T d1ioka1 194 KVRES----SDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALE 232 (252)
T ss_dssp HHHSC----CSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHH
T ss_pred eeccc----CcCCEEEEceeeeEeeeecccccCcHHHHHHHHH
Confidence 87653 3468999999999999999999999999998875
No 28
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=98.15 E-value=2.7e-07 Score=86.31 Aligned_cols=130 Identities=15% Similarity=0.205 Sum_probs=78.5
Q ss_pred eEEEeccCCCCCC-------cccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhhC
Q psy14945 170 GVVLNHGARHPDM-------PKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMTG 242 (629)
Q Consensus 170 Gvv~~~~~~~~~m-------~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~G 242 (629)
|+-|+++|.+|++ ...++||.|+++|..+. ..+.++|.|+.+ ..+..+.+++.+.
T Consensus 1 G~~~d~Gy~Sp~Fvt~~~~~~~~~~~p~ili~d~ki~----~~~~i~p~Le~~------~~~~rPLlIIA~d-------- 62 (184)
T d1sjpa2 1 GMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVS----TVKDLLPLLEKV------IGAGKPLLIIAED-------- 62 (184)
T ss_dssp EEEESCCBSCGGGCSBTTTTBEEEESCEEEEESSCBC----CSTTTHHHHHHH------HTTTCCEEEEESC--------
T ss_pred CCccCcCccCcccccCCCCCEEEecCCEEEEecCccC----cHHHHHHHHHHh------hccCCcEEEEcch--------
Confidence 8999999999964 45689999999999994 455666666643 1112222222211
Q ss_pred CCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCcc
Q psy14945 243 DGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGTA 322 (629)
Q Consensus 243 DGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~i 322 (629)
=..-++..+. .++.++.+.+|++ ...++.+ .++..+++||..|||++
T Consensus 63 -i~~~aL~~Lv-------------~N~~~g~l~v~aV---kaPgfG~----------------~r~~~L~DlA~~TGa~v 109 (184)
T d1sjpa2 63 -VEGEALSTLV-------------VNKIRGTFKSVAV---KAPGFGD----------------RRKAMLQDMAILTGGQV 109 (184)
T ss_dssp -BCHHHHHHHH-------------HHHHTTSSCCEEE---ECSSCHH----------------HHHHHHHHHHHHHTCCE
T ss_pred -hhHHHHHHHH-------------HHHhcCchheecc---cCCCCCc----------------chHHHHHHHHHHhCCEE
Confidence 1111133333 2223444556642 2333322 13457999999999999
Q ss_pred ccc-----ccccCcCCCcccceEEEEEEcCeeEEEE
Q psy14945 323 MNS-----VEGLEPAHLGYAGSVFEHVLGEEKFTFV 353 (629)
Q Consensus 323 ~~s-----~~~l~~~~lG~~~~v~e~~i~~~~~~~~ 353 (629)
++. +..++.+.+|+|+++. +..++.+++
T Consensus 110 i~~~~g~~l~~~~~~~LG~~~kv~---itk~~T~ii 142 (184)
T d1sjpa2 110 ISEEVGLTLENADLSLLGKARKVV---VTKDETTIV 142 (184)
T ss_dssp EBTTTTBCSSSCCTTTSEEEEEEE---ECSSCEEEE
T ss_pred ecccccccccccchhhCCeeeEEE---EecCceEEe
Confidence 974 4567778899998776 444444444
No 29
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=98.13 E-value=2e-06 Score=84.45 Aligned_cols=96 Identities=18% Similarity=0.239 Sum_probs=77.6
Q ss_pred eEEecccHHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhhhHHHHHhhhccCCchhHHHHHhHHhcCCCHHHHHHHH
Q psy14945 507 RVITEGFTQARLKALEVLESLKITTPPSREILLDVARTSLRTKVERELADLLAEPNSVPSLRNSATVNSGFDAQDTLVKL 586 (629)
Q Consensus 507 ~iV~gGg~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~l~~a~al~~IP~~La~NaG~d~~~~l~~L 586 (629)
.+.+||+. ++..++..+.... ..+++++++.+++++||+.|+ +++++|+|.++.+++.++
T Consensus 136 ~i~~~~~~-~~v~~~~~~~~~k-~~n~d~~iG~~Iv~~Al~~p~------------------~~i~~nag~~g~~~~~~v 195 (252)
T d1kp8a1 136 GVVAGGGV-ALIRVASKLADLR-GQNADQNVGIKVALRAMEAPL------------------RQIVLNCGEEPSVVANTV 195 (252)
T ss_dssp CEEETTTH-HHHHHHHHTTTCC-CSSHHHHHHHHHHHHHTTHHH------------------HHHHHHHTSCHHHHHHHH
T ss_pred eeccCchh-hhhHHHHHhhhhc-ccCccHHHhHHHHHHHHHHHH------------------HHHHHhhhhcccccceee
Confidence 45665554 4477776655443 245789999999999999877 789999999999999988
Q ss_pred HHHhhcCCCceeeEecCCCcccccccCCccccHHHHHHHhh
Q psy14945 587 QEACGEAPGVAVGVDVNSGEVLNPTSAGIYDNLTVKRQIIN 627 (629)
Q Consensus 587 ~~~h~~~~~~~~Gvd~~~g~i~d~~~~gI~dp~~vK~~~i~ 627 (629)
+.. ..++|+|..++.++||++.|++||+.|...+++
T Consensus 196 ~~~-----~~~~g~~~~~~~~g~~~~~G~idP~~Vt~~al~ 231 (252)
T d1kp8a1 196 KGG-----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQ 231 (252)
T ss_dssp HHS-----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHH
T ss_pred eec-----CCCeeEEEEEEEEEEEEeeccCCcceeccHhhh
Confidence 642 346899999999999999999999999998875
No 30
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]}
Probab=98.11 E-value=7.4e-08 Score=90.84 Aligned_cols=135 Identities=15% Similarity=0.208 Sum_probs=76.7
Q ss_pred eEEEEeEEEeccCCCCCC-------cccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHH
Q psy14945 165 IILVKGVVLNHGARHPDM-------PKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAM 237 (629)
Q Consensus 165 S~li~Gvv~~~~~~~~~m-------~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~ 237 (629)
.++.+|+.|+++|.+|+| ...++||.|++++..|+. .+.++|.|+... .+..+-++.
T Consensus 4 ~~~tEG~~~d~Gy~SpyFvtd~~~~~~~l~~p~ILitd~kI~~----~~~i~p~Le~~~------~~~~pLlII------ 67 (193)
T d1kida_ 4 PRGSEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISN----IREMLPVLEAVA------KAGKPLLII------ 67 (193)
T ss_dssp CSCCCCEEESCCCSCGGGCCBTTTTBEEEESCEEEEBSSEECC----HHHHHHHHHHHH------HHTCCEEEE------
T ss_pred ccccCCeeecCCcCCccceeCCCCCEEEecCcEEEEEcCCccc----HHHHHHHHHHHH------hhCCcEEEE------
Confidence 456789999999999964 456899999999999842 233334333220 000001111
Q ss_pred hhhhCCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHH
Q psy14945 238 DDMTGDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLA 317 (629)
Q Consensus 238 ~~~~GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~ 317 (629)
.-|=...|+..+. .++.++.+.+|++ ...++.+ .++..+++||.+
T Consensus 68 ---A~di~~~aL~~Lv-------------~N~~kg~l~v~aV---kaPgfG~----------------~r~~~LeDlA~~ 112 (193)
T d1kida_ 68 ---AEDVEGEALATLV-------------VNTMRGIVKVAAV---KAPGFGD----------------RRKAMLQDIATL 112 (193)
T ss_dssp ---ESEECHHHHHHHH-------------HHHHTTSCCEEEE---ECCSCHH----------------HHHHHHHHHHHH
T ss_pred ---eccccHHHHHHHH-------------HhhhccCcceeec---cCCCcCh----------------hHHHHHHHHHHH
Confidence 1111111233332 2222344445532 2223322 134579999999
Q ss_pred hCCccccc-----ccccCcCCCcccceEEEEEEcCeeEEEE
Q psy14945 318 CGGTAMNS-----VEGLEPAHLGYAGSVFEHVLGEEKFTFV 353 (629)
Q Consensus 318 tGg~i~~s-----~~~l~~~~lG~~~~v~e~~i~~~~~~~~ 353 (629)
|||++++. +..++.+++|+|+++. ++..+.+++
T Consensus 113 TGa~vi~~~~g~~l~~~~~~~LG~~~kv~---itk~~T~ii 150 (193)
T d1kida_ 113 TGGTVISEEIGMELEKATLEDLGQAKRVV---INKDTTTII 150 (193)
T ss_dssp HTCCCBCGGGTCCGGGCCGGGCEEEEEEE---ECSSCEEEE
T ss_pred cCCEEechhcccccccCCHhHcCcccEEE---EecCceEEE
Confidence 99999885 3567778899998776 444444444
No 31
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.10 E-value=1.9e-07 Score=86.69 Aligned_cols=131 Identities=18% Similarity=0.257 Sum_probs=60.1
Q ss_pred EeEEEeccCCCCCC-------cccccCeeEEEeeccccccccccCCCccccccccceeeeccccHHHHHHHHHHHHhhhh
Q psy14945 169 KGVVLNHGARHPDM-------PKSVKNAHILTCNISMEYEKSSQGGHQPEISLAKGIANQIQHPTASLIARASTAMDDMT 241 (629)
Q Consensus 169 ~Gvv~~~~~~~~~m-------~~~i~n~kIll~~~~Le~~k~~~~~~~~~l~~~~~i~i~~~~~~akll~~e~~~~~~~~ 241 (629)
+|+-|++||.+|++ ...++||.|+++|..|+ ..+.++|.|+... .+..+.++..+. ..
T Consensus 1 EG~~~d~Gy~SpyFvtd~~~~~~~l~np~ILi~d~kI~----~~~~i~p~Le~~~------~~~~PLlIIA~d-----i~ 65 (176)
T d1ioka2 1 EGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLS----SLQPMVPLLESVI------QSQKPLLIVAED-----VE 65 (176)
T ss_dssp CCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBC----CCCC-----------------CCCCEEEESC-----BC
T ss_pred CCcccccCccCccceeCCcCCEEEeeCcEEEEEccccC----cHHHHHHHHHHHH------hcCCcEEEEecC-----CC
Confidence 49999999999964 45689999999999995 4566777777531 111122222111 11
Q ss_pred CCCchHHHHHHHHHHhhhHHHHHHHhhccccccCccccccccccCCCHHHHHHHHHhCcEEEeccchhhHHHHHHHhCCc
Q psy14945 242 GDGTTSTVLVIGELLKQADIYIAEVNLKMHKFAPDCSTSDRYRTGIDPQSLDLFAREGIIALRRAKRRNMERLSLACGGT 321 (629)
Q Consensus 242 GDGTt~Vv~~i~elL~~Ae~ll~~~~~~~~~~l~v~~~~~l~~k~i~~~~~~~la~~~I~vv~~v~~~dl~rIak~tGg~ 321 (629)
|| ++..+. .++.++.+.+|++ -..++++ .++..|++||..|||+
T Consensus 66 ~~----aL~~Lv-------------~N~~~g~l~v~aV---kaP~fG~----------------~r~~~LeDlA~~tGa~ 109 (176)
T d1ioka2 66 GE----ALATLV-------------VNKLRGGLKIAAV---KAPGFGD----------------RRKAMLQDIAILTGGQ 109 (176)
T ss_dssp ----------------------------------CEEE---ECSCCTT----------------HHHHHHHHHHHHHTC-
T ss_pred HH----HHHHHH-------------HHHhcCCceEEEE---eCCCCCc----------------HHHHHHHHHHHhhCCE
Confidence 11 123332 2223344455542 1223322 1345799999999999
Q ss_pred cccc-----ccccCcCCCcccceEEEEEEcCeeEEEE
Q psy14945 322 AMNS-----VEGLEPAHLGYAGSVFEHVLGEEKFTFV 353 (629)
Q Consensus 322 i~~s-----~~~l~~~~lG~~~~v~e~~i~~~~~~~~ 353 (629)
+++. +..++.+.+|+|+++. ++.++.+++
T Consensus 110 vi~~~~g~~l~~~~~~~LG~a~kv~---vtk~~T~ii 143 (176)
T d1ioka2 110 VISEDLGMKLENVTIDMLGRAKKVS---INKDNTTIV 143 (176)
T ss_dssp --------------CTTSEEEEEEE---ECSSCEEEE
T ss_pred EEecccCCChhhCCHHHCceeeEEE---EecCceEEE
Confidence 9875 4567778899998776 444444333
No 32
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]}
Probab=98.04 E-value=1e-07 Score=85.63 Aligned_cols=44 Identities=23% Similarity=0.376 Sum_probs=34.7
Q ss_pred hhhHHHHHHHhCCccccc-----ccccCcCCCcccceEEEEEEcCeeEEEEe
Q psy14945 308 RRNMERLSLACGGTAMNS-----VEGLEPAHLGYAGSVFEHVLGEEKFTFVE 354 (629)
Q Consensus 308 ~~dl~rIak~tGg~i~~s-----~~~l~~~~lG~~~~v~e~~i~~~~~~~~~ 354 (629)
+..++++|..|||++.+. ++.++.+.+|+|+++. ++.++.+++.
T Consensus 95 ~~~L~DlAi~tGa~v~~~~~g~~l~~~~~~~LGsa~kv~---vtkd~T~ii~ 143 (145)
T d1srva_ 95 KEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVR---ITKDETTIVG 143 (145)
T ss_dssp HHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEE---ECSSCEEEEE
T ss_pred HHHHhhhhhhhCCEeeccccCcccccCCHHHCCcccEEE---EeCCccEEeC
Confidence 457999999999999865 3456778899998876 6666766664
No 33
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=87.05 E-value=0.0026 Score=51.25 Aligned_cols=50 Identities=14% Similarity=0.023 Sum_probs=34.3
Q ss_pred cccccceeEEEec-CCCccc-eEEEEeEEEeccCCCCCCc--------ccccCeeEEEee
Q psy14945 146 NAHILTCNISMEY-EKSDVC-IILVKGVVLNHGARHPDMP--------KSVKNAHILTCN 195 (629)
Q Consensus 146 ~~~~~~i~i~~i~-Ggs~~d-S~li~Gvv~~~~~~~~~m~--------~~i~n~kIll~~ 195 (629)
+..+++-.++.+. |.+..+ .++++|+.|++++.+|++. ..++||+||+.+
T Consensus 29 ~~kVG~dGvItvEe~~~~~t~le~veG~~~d~Gy~Sp~fvtd~k~r~e~~l~~p~ili~d 88 (89)
T d1sjpa3 29 MDKVGNEGVITVEESNTFGLQLELTEVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEE 88 (89)
T ss_dssp HHHSCTTSCEEEEEESSSSEEEEEESEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCceEEEeccccceEEEEEEEEEecCCccCceEEcccHHhhHHHHhCceEeeec
Confidence 3445555666665 555554 6999999999999998652 125677776654
No 34
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=39.43 E-value=72 Score=25.63 Aligned_cols=70 Identities=20% Similarity=0.208 Sum_probs=54.0
Q ss_pred CHHHHHHHHHhhHHHHHHHhhCCCcccCCChHHHHHHHHHHh---hhhhcCcchHHHHHHHHHHHhhhhHHHHH
Q psy14945 373 TLAQTKDAVRDGLRAIKNTIDDGAVVPGAGAFEVAAWHALQN---YKNTVKGKSRLGIQAYAEALLIIPKTIAV 443 (629)
Q Consensus 373 ~l~e~~r~i~dal~vv~~~~~~~~VV~GGG~~El~l~~~L~~---~~~~i~~~~k~~i~~fa~ALe~ip~~L~~ 443 (629)
.+.+....|...+......+.+|...+| |..|-++...+.+ .+..+.+..+-.|...|.-++.....|++
T Consensus 13 ~mkka~~~i~~kleqA~~WL~dP~~~~g-g~Ge~AiR~il~earkva~~~~~~~r~~Il~~c~ei~~lt~qLad 85 (119)
T d1st6a3 13 AMKRALALIDSKMNQAKGWLRDPNAPPG-DAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLAD 85 (119)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHSTTSCST-TTTHHHHHHHHHHHHHHHHTTCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCcCCCCC-CccHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556667777888888888999987666 8889998766653 34466788899999999998887777764
No 35
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]}
Probab=37.14 E-value=1.1 Score=35.04 Aligned_cols=32 Identities=22% Similarity=0.066 Sum_probs=23.2
Q ss_pred cccccceeEEEec-CCCccc-eEEEEeEEEeccC
Q psy14945 146 NAHILTCNISMEY-EKSDVC-IILVKGVVLNHGA 177 (629)
Q Consensus 146 ~~~~~~i~i~~i~-Ggs~~d-S~li~Gvv~~~~~ 177 (629)
+.++|.-.++.++ |.+..+ .++++|+.++.++
T Consensus 27 ~~kVG~dGvItVEes~t~~t~levveG~~~~~s~ 60 (86)
T d1we3a3 27 MEKVGKEGIITVEESKSLETELKFVGVAVIRVGA 60 (86)
T ss_dssp HHTTCTTSEEEEEECSSSSCEEEEECEEEEEECC
T ss_pred HHHcCCCceEEEEecCCCCeEEEEEEeeecccce
Confidence 3456777888888 555554 6899999998664
No 36
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]}
Probab=29.07 E-value=20 Score=28.00 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=29.2
Q ss_pred ccEEEEecCCCccCHHHHHHHHHhhHHHHHHHhh
Q psy14945 360 QSVTILLKGPNKHTLAQTKDAVRDGLRAIKNTID 393 (629)
Q Consensus 360 ~~~TIll~g~~~~~l~e~~r~i~dal~vv~~~~~ 393 (629)
..+.+.+.++++..+++.+..+.||++++|.++.
T Consensus 63 yiS~~fv~~~t~~E~~ekk~~veDAl~a~raa~~ 96 (97)
T d1ioka3 63 GVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQ 96 (97)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCceeeeeeccceeecCHHHHHHHhc
Confidence 4566777888999999999999999999998864
No 37
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]}
Probab=25.02 E-value=12 Score=33.28 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=29.4
Q ss_pred CceeEeEEEecCCCCCCCC-------cccccceEEEEeecccc
Q psy14945 14 DSCLVKGVVLDHGARHPDM-------PKSVKNAHILTCNISME 49 (629)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~~-------~~~~~~~~i~~~~~~~e 49 (629)
|-++-+|+-+|.|--+|-| --.++||+||++|-.+.
T Consensus 3 ~~~~tEG~~~d~Gy~SpyFvtd~~~~~~~l~~p~ILitd~kI~ 45 (193)
T d1kida_ 3 VPRGSEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKIS 45 (193)
T ss_dssp CCSCCCCEEESCCCSCGGGCCBTTTTBEEEESCEEEEBSSEEC
T ss_pred CccccCCeeecCCcCCccceeCCCCCEEEecCcEEEEEcCCcc
Confidence 5678899999999999877 34588999999986543
Done!