BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14955
(191 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|201023287|ref|NP_001128389.1| voltage-gated sodium channel alpha subunit isoform l [Nasonia
vitripennis]
Length = 2084
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/178 (96%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ FE +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1308 IFTVIFFFEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1363
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1364 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1422
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D WV F + ++ P LFI I+ N + M + ++
Sbjct: 764 FCVWDCCWVWLKF---QEYVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKEMDRVLK 820
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 821 SGNYFFTATFAIEATMKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 876
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 877 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 929
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1622 NMIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1674
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1734
>gi|1657986|gb|AAC47484.1| para sodium channel [Blattella germanica]
Length = 2031
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/178 (96%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCI MIMP
Sbjct: 102 TFVVVSKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCIFMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1294 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLI 1349
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V + G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1350 NFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1409
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1410 WLIFAIMGVQLFAGK 1424
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 3 VVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG- 61
+ +G DIF D W+ F VA+ ++ P LFI I+ N + M +
Sbjct: 750 AICMRGIDIF--CVWDCCWLWLKFQ--EYVAL-LVFDPFVELFITLCIVVNTLFMALDHH 804
Query: 62 ------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++S FT + E+ +K++A + Y ++ WN DFI++AL+ +
Sbjct: 805 DMNKDMDKALKSGNYFFTATFAIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLE 860
Query: 116 MGID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSV 171
+G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +
Sbjct: 861 LGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---I 917
Query: 172 FALMGLQ 178
FA+MG+Q
Sbjct: 918 FAVMGMQ 924
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I++ E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1624 NMIFIVIFSSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1676
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1677 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1736
>gi|148277534|tpe|CAM31896.1| TPA: voltage-gated sodium channel alpha subunit [Nasonia
vitripennis]
Length = 2084
Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/178 (96%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ FE +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1308 IFTVIFFFEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1363
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1364 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1422
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D WV F + ++ P LFI I+ N + M + ++
Sbjct: 764 FCVWDCCWVWLKF---QEYVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKEMDRVLK 820
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 821 SGNYFFTATFAIEATMKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 876
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 877 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 929
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1622 NMIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1674
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1734
>gi|1657984|gb|AAC47483.1| para sodium channel [Blattella germanica]
Length = 2031
Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/178 (96%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCI MIMP
Sbjct: 102 TFVVVSKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCIFMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1294 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLI 1349
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V + G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1350 NFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1409
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1410 WLIFAIMGVQLFAGK 1424
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Query: 3 VVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG- 61
+ +G DIF D W+ F VA+ ++ P LFI I+ N + M +
Sbjct: 750 AICMRGIDIF--CVWDCCWLWLKFQ--EYVAL-LVFDPFVELFITLCIVVNTLFMALDHH 804
Query: 62 ------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++S FT + E+ +K++A + Y ++ WN DFI++AL+ +
Sbjct: 805 DMNKDMDKALKSGNYFFTATFAIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLE 860
Query: 116 MGID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSV 171
+G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +
Sbjct: 861 LGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---I 917
Query: 172 FALMGLQ 178
FA+MG+Q
Sbjct: 918 FAVMGMQ 924
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I++ E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1624 NMIFIVIFSSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1676
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1677 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1736
>gi|148277532|tpe|CAM31895.1| TPA: voltage-gated sodium channel alpha subunit [Nasonia
vitripennis]
Length = 2084
Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/178 (96%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLA 124
IFT I+ FE +K +A GF Y +AW WLDFI++ L+ V + D+
Sbjct: 1308 IFTVIFFFEMLIKWLALGFK----KYFTNAWCWLDFIIVMLSLVNVAAIWAGVADIPAFR 1363
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++RT R LR L+ V+ G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1364 SMRTLRALRPLRGVSRWEGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1422
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D WV F + ++ P LFI I+ N + M + ++
Sbjct: 764 FCVWDCCWVWLKF---QEYVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKEMDRVLK 820
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 821 SGNYFFTATFAIEATMKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 876
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 877 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 929
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1622 NMIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1674
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1734
>gi|201023289|ref|NP_001128390.1| voltage-gated sodium channel alpha subunit isoform k [Nasonia
vitripennis]
Length = 2084
Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/178 (96%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLA 124
IFT I+ FE +K +A GF Y +AW WLDFI++ L+ V + D+
Sbjct: 1308 IFTVIFFFEMLIKWLALGFK----KYFTNAWCWLDFIIVMLSLVNVAAIWAGVADIPAFR 1363
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++RT R LR L+ V+ G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1364 SMRTLRALRPLRGVSRWEGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1422
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D WV F + ++ P LFI I+ N + M + ++
Sbjct: 764 FCVWDCCWVWLKF---QEYVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKEMDRVLK 820
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 821 SGNYFFTATFAIEATMKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 876
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 877 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 929
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1622 NMIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1674
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1734
>gi|350409729|ref|XP_003488828.1| PREDICTED: sodium channel protein para-like [Bombus impatiens]
Length = 2044
Score = 343 bits (880), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1328 IFTVIFFLEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1383
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1384 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1442
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F ++ ++ P LFI I+ N + M + + E +
Sbjct: 784 FCVWDCCWLWLEF---QKYVSLVVFDPFVELFITLCIVVNTLFMALDHHDMDKDMEKVLK 840
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 841 TGNYFFTATFGIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 896
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 897 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 949
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1643 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1695
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1696 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1754
>gi|340718624|ref|XP_003397764.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein para-like
[Bombus terrestris]
Length = 2044
Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1328 IFTVIFFLEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1383
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1384 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1442
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F ++ ++ P LFI I+ N + M + + E +
Sbjct: 784 FCVWDCCWLWLEF---QKYVSLVVFDPFVELFITLCIVVNTLFMALDHHDMDKDMEKVLK 840
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 841 TGNYFFTATFGIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 896
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 897 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 949
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1643 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1695
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1696 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1754
>gi|259906449|ref|NP_001159377.1| sodium channel protein paralytic [Apis mellifera]
gi|258674487|gb|ACV87000.1| paralytic [Apis mellifera]
Length = 2044
Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1328 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1383
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1384 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1442
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F ++ ++ P LFI I+ N + M + + E +
Sbjct: 784 FCVWDCCWLWLEF---QKYVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 840
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 841 TGNYFFTATFGIEATLKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 896
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 897 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 949
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1643 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1695
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1696 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1754
>gi|259906457|ref|NP_001159380.1| paralytic A [Tribolium castaneum]
gi|258674491|gb|ACV87002.1| paralytic A [Tribolium castaneum]
Length = 2045
Score = 342 bits (878), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ FE +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1324 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLINFIASLCGAGGIQAFK 1379
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1380 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1438
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 23/180 (12%)
Query: 10 DIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------T 62
DIF WV+ I++ I+ P LFI I+ N + M +
Sbjct: 781 DIFCVWDCCHCWVV-----IQKFVSLIVFDPFVELFITLCIVVNTLFMALDHHDMDKDLE 835
Query: 63 PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LG 121
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ +
Sbjct: 836 KALKSGNYFFTATFMIEATMKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQ 891
Query: 122 NLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 892 GLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 948
>gi|270015106|gb|EFA11554.1| paralytic [Tribolium castaneum]
Length = 2070
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 145 TFVVVSKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 204
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 205 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 264
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 265 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 322
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ FE +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1349 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLINFIASLCGAGGIQAFK 1404
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1405 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1463
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 23/180 (12%)
Query: 10 DIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------T 62
DIF WV+ I++ I+ P LFI I+ N + M +
Sbjct: 806 DIFCVWDCCHCWVV-----IQKFVSLIVFDPFVELFITLCIVVNTLFMALDHHDMDKDLE 860
Query: 63 PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LG 121
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ +
Sbjct: 861 KALKSGNYFFTATFMIEATMKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQ 916
Query: 122 NLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 917 GLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 973
>gi|307168143|gb|EFN61422.1| Sodium channel protein para [Camponotus floridanus]
Length = 2088
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATDAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F ++ I+ P LFI I+ N + M + + E I
Sbjct: 774 FCVWDCCWLWLEF---QKYVSLIVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERILK 830
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 831 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 886
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 887 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 939
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 51/160 (31%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG------------- 117
IFT I+ E +K +A GF Y +AW WLDFI++ L+ + +G
Sbjct: 1327 IFTVIFFLEMLIKWLALGFS----KYFTNAWCWLDFIIVMLSLINLGAVWAGAADIPAFR 1382
Query: 118 ---------------------IDLGNLAA-------------LRTFRVLRALKTVAIVPG 143
+ L N A +RT R LR L+ ++ + G
Sbjct: 1383 SMRTLRALRPLRAVSRWEGMRVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQG 1442
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1443 MRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1482
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1686 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1738
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1739 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1797
>gi|260528198|gb|ACX44801.1| voltage-gated sodium channel Nav1 alpha subunit [Periplaneta
americana]
Length = 2050
Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCI MIMP
Sbjct: 113 TFVVVSKGKDIFRFSATEAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCIFMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDF+++ ++ +V + G + A
Sbjct: 1330 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFK 1385
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1386 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1444
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
+G DIF D W+ F VA+ ++ P LFI I+ N + M +
Sbjct: 762 RGIDIF--CVWDCCWLWLKFQ--EYVAL-LVFDPFVELFITLCIVVNMLFMALDHYDMNK 816
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 817 DMEKALKSGNYFFTATFAIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 872
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 873 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVM 929
Query: 176 GLQ 178
G+Q
Sbjct: 930 GMQ 932
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I++ E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1644 NMIFIVIFSSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1696
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1697 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1756
>gi|357623276|gb|EHJ74501.1| voltage-gated sodium channel alpha subunit [Danaus plexippus]
Length = 2112
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1340 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1395
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1396 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1455
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1456 WLIFAIMGVQLFAGK 1470
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP--- 63
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 811 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHDMDK 865
Query: 64 ----TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 866 DMDKALKSGNYFFTATFGIEAMLKLIA----MSPKYYFQEGWNVFDFIIVALSLLELGLE 921
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 922 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVM 978
Query: 176 GLQ 178
G+Q
Sbjct: 979 GMQ 981
>gi|189172241|gb|ACD80425.1| para sodium channel alpha subunit variant 1 [Bombyx mandarina]
Length = 1864
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1285 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1340
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1341 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1400
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1401 WLIFAIMGVQLFAGK 1415
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 739 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHNMDK 793
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 794 DMDKALKSGNYFFTATFGIEATLKLLA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 849
Query: 120 LGN-LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 850 GAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVM 906
Query: 176 GLQ 178
G+Q
Sbjct: 907 GMQ 909
>gi|189172247|gb|ACD80428.1| para sodium channel alpha subunit variant 4 [Bombyx mandarina]
Length = 1840
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1261 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1316
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1317 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1376
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1377 WLIFAIMGVQLFAGK 1391
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 728 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHNMDK 782
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 783 DMDKALKSGNYFFTATFGIEATLKLLA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 838
Query: 120 LGN-LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 839 GAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVM 895
Query: 176 GLQ 178
G+Q
Sbjct: 896 GMQ 898
>gi|189172245|gb|ACD80427.1| para sodium channel alpha subunit variant 3 [Bombyx mandarina]
Length = 1810
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 739 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHNMDK 793
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 794 DMDKALKSGNYFFTATFGIEATLKLLA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 849
Query: 120 LGN-LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 850 GAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVM 906
Query: 176 GLQ 178
G+Q
Sbjct: 907 GMQ 909
>gi|189172243|gb|ACD80426.1| para sodium channel alpha subunit variant 2 [Bombyx mandarina]
Length = 1851
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1272 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1327
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1328 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1387
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1388 WLIFAIMGVQLFAGK 1402
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 739 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHNMDK 793
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 794 DMDKALKSGNYFFTATFGIEATLKLLA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 849
Query: 120 LGN-LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 850 GAQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVM 906
Query: 176 GLQ 178
G+Q
Sbjct: 907 GMQ 909
>gi|217330564|ref|NP_001136084.1| voltage-gated sodium channel alpha subunit [Bombyx mori]
gi|210148108|gb|ACJ09096.1| voltage-gated sodium channel alpha subunit [Bombyx mori]
Length = 2038
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1311 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1366
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1367 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1426
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1427 WLIFAIMGVQLFAGK 1441
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 778 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHNMDK 832
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 833 DMDKALKSGNYFFTATFGIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 888
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 889 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVM 945
Query: 176 GLQ 178
G+Q
Sbjct: 946 GMQ 948
>gi|259906459|ref|NP_001159381.1| paralytic B [Tribolium castaneum]
gi|258674493|gb|ACV87003.1| paralytic B [Tribolium castaneum]
Length = 2048
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+ALWVLDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALWVLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL+GLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALIGLQ 290
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ FE +K +A GF Y +AW WLDF+++ ++ + L G + A
Sbjct: 1326 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFVIVMVSLINFIASLCGAGGIQAFK 1381
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1382 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1440
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ ++ P LFI I+ N + M + ++S FT + E+
Sbjct: 793 IQKFVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKDLEKALKSGNYFFTATFMIEAT 852
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
+K++A + Y ++ WN DFI++AL+ + +G++ + L+ LR+FR+LR K
Sbjct: 853 LKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS 908
Query: 141 VPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 909 WPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 946
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARG 88
I+ + F + I+ I N + M M T ++S +IF I++ E +K+ A
Sbjct: 1600 IVTNKKFDMIIMLFIGLNMLTMTMDHYQQKETFTKVLDSLNMIFIVIFSTECLMKIFAL- 1658
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-----------LAALRTFRVLRALKT 137
+ Y + WN D +V+ L+ +G+ L + L +R +V R L+
Sbjct: 1659 ----RYHYFTEPWNLFDLVVVILS--ILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRL 1712
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIIL---TMFSLSVFAL---MGLQDSRG 182
V G++T++ A+ S+ L ++ +L MF ++F + M ++D G
Sbjct: 1713 VKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSG 1763
>gi|270015129|gb|EFA11577.1| hypothetical protein TcasGA2_TC004749 [Tribolium castaneum]
Length = 2031
Score = 340 bits (873), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+ALWVLDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALWVLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL+GLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALIGLQ 290
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ FE +K +A GF Y +AW WLDF+++ ++ + L G + A
Sbjct: 1309 IFTVIFFFEMLIKWLALGFQ----KYFTNAWCWLDFVIVMVSLINFIASLCGAGGIQAFK 1364
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1365 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1423
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ ++ P LFI I+ N + M + ++S FT + E+
Sbjct: 786 IQKFVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKDLEKALKSGNYFFTATFMIEAT 845
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
+K++A + Y ++ WN DFI++AL+ + +G++ + L+ LR+FR+LR K
Sbjct: 846 LKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS 901
Query: 141 VPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 902 WPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 939
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARG 88
I+ + F + I+ I N + M M T ++S +IF I++ E +K+ A
Sbjct: 1583 IVTNKKFDMIIMLFIGLNMLTMTMDHYQQKETFTKVLDSLNMIFIVIFSTECLMKIFAL- 1641
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-----------LAALRTFRVLRALKT 137
+ Y + WN D +V+ L+ +G+ L + L +R +V R L+
Sbjct: 1642 ----RYHYFTEPWNLFDLVVVILS--ILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRL 1695
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIIL---TMFSLSVFAL---MGLQDSRG 182
V G++T++ A+ S+ L ++ +L MF ++F + M ++D G
Sbjct: 1696 VKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSG 1746
>gi|30350266|gb|AAP20108.1| voltage-sensitive sodium channel alpha-subunit [Pediculus humanus
capitis]
Length = 2051
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATNAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP +ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDFIVI+LAYVTMGIDL
Sbjct: 162 TTPAVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFIVISLAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDF+++ ++ + L G + A
Sbjct: 1316 IFTVIFFIEMLIKWLALGFK----EYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFK 1371
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1372 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1430
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D W F VA+ ++ P LFI I+ N + M + ++
Sbjct: 768 FCVWDCCWAWLKFQEF--VAL-LVFDPFVELFITLCIVVNTLFMALDHHDIDKDMDRALK 824
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 825 SGNYFFTATFAIEATLKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLENVQGLSV 880
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L ++ + +V L ++I + + +FA+MG+Q
Sbjct: 881 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLIFVFCIIIFIFAVMGMQ 933
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-- 122
+++ +IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1626 LDTLNLIFIVIFSSECLMKIFAL-----RYHYFVEPWNLFDFVVVILS--ILGLVLSDII 1678
Query: 123 ---------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA
Sbjct: 1679 EKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFA 1738
Query: 174 LMGL 177
+ G+
Sbjct: 1739 IFGM 1742
>gi|214011858|gb|ACB37022.1| voltage-gated para-like sodium channel [Aedes aegypti]
Length = 2140
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTILTNCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILTNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1337 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1392
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1393 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1452
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1453 WLIFAIMGVQLFAGK 1467
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 780 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMERALK 836
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 837 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 892
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 893 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 945
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1668 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1720
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1721 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1779
>gi|332020832|gb|EGI61230.1| Sodium channel protein para [Acromyrmex echinatior]
Length = 1447
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+S+GKD+FRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NC+LMIMP
Sbjct: 113 TFVVISRGKDVFRFSATDAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCVLMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D W+ F ++ ++ P LFI I+ N + M + ++
Sbjct: 794 FCVWDCCWLWLEF---QKYVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 850
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ V +G++ + L+
Sbjct: 851 SGNYFFTATFGIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLVELGLEGVQGLSV 906
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 907 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 959
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG------IDLGNLA 124
IFT I+ E +K +A GF Y +AW WLDFI++ L+ + +G D+
Sbjct: 1338 IFTVIFFLEMLIKWLALGFK----KYFTNAWCWLDFIIVMLSLINLGAVWAGAADIPAFR 1393
Query: 125 ALRTFRVLRALKTVAIVPGLK 145
++RT R LR L+ V+ G++
Sbjct: 1394 SMRTLRALRPLRAVSRWEGMR 1414
>gi|214011860|gb|ACB37023.1| voltage-gated para-like sodium channel [Aedes aegypti]
Length = 2140
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTILTNCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILTNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1337 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1392
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1393 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1452
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1453 WLIFAIMGVQLFAGK 1467
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 780 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMERALK 836
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 837 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 892
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 893 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 945
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1668 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1720
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1721 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1779
>gi|29467444|dbj|BAC67159.1| para-orthologous sodium channel alpha-subunit [Pediculus humanus
corporis]
Length = 2086
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 112 TFVVISKGKDIFRFSATNAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 171
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP +ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDFIVI+LAYVTMGIDL
Sbjct: 172 TTPAVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFIVISLAYVTMGIDL 231
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 232 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 289
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D W F VA+ ++ P LFI I+ N + M + ++
Sbjct: 803 FCVWDCCWAWLKFQEF--VAL-LVFDPFVELFITLCIVVNTLFMALDHHDMDKDMDRALK 859
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 860 SGNYFFTATFAIEATLKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLENVQGLSV 915
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 916 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 968
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDF+++ ++ + L G + A
Sbjct: 1351 IFTVIFFIEMLIKWLALGFK----EYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFK 1406
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1407 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1465
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-- 122
+++ +IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1661 LDTLNLIFIVIFSSECLMKIFAL-----RYHYFVEPWNLFDFVVVILS--ILGLVLSDII 1713
Query: 123 ---------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA
Sbjct: 1714 EKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFA 1773
Query: 174 LMGL 177
+ G+
Sbjct: 1774 IFGM 1777
>gi|295136555|gb|ADF80418.1| voltage-gated sodium channel [Helicoverpa zea]
Length = 1830
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++ +
Sbjct: 1285 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1340
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1341 NFVAGLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1400
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1401 WLIFAIMGVQLFAGK 1415
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 13/172 (7%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-VIF 72
F D W+ F + VA+ + P LFI I+ N + M + + E +
Sbjct: 757 FCVWDCCWLWLEFQ--KYVALLVF-DPFVELFITLCIVVNTLFMALDHHDMDKDMERALK 813
Query: 73 TGIYTFES--AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTF 129
+G Y F + ++ M++ + Y ++ WN DFI++AL+ + +G++ + L+ LR+F
Sbjct: 814 SGNYFFTATFGIEAMSKLVAMSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSF 873
Query: 130 RVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 874 RLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 922
>gi|50080866|gb|AAT69681.1| voltage-dependent para-like sodium channel, partial [Aedes aegypti]
Length = 2064
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTILTNCILMIMP
Sbjct: 50 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILTNCILMIMP 109
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 110 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 169
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 170 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 227
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1261 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1316
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1317 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1376
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1377 WLIFAIMGVQLFAGK 1391
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 717 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMERALK 773
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 774 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 829
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 830 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 882
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1591 NMIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYF 1643
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1644 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1703
>gi|214011862|gb|ACB37024.1| voltage-gated para-like sodium channel [Aedes aegypti]
Length = 2147
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTILTNCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILTNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1344 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1399
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1400 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1459
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1460 WLIFAIMGVQLFAGK 1474
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 787 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMERALK 843
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 844 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 899
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 900 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 952
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1675 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1727
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1728 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1786
>gi|30350264|gb|AAP20107.1| voltage-sensitive sodium channel alpha-subunit [Pediculus humanus
capitis]
Length = 2051
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATNAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP +ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDFIVI+LAYVTMGIDL
Sbjct: 162 TTPAVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFIVISLAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D W F VA+ + P LFI I+ N + M + ++
Sbjct: 768 FCVWDCCWAWLKFQEF--VALLVF-DPFVELFITLCIVVNTLFMALDHHDMDKDMDRALK 824
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 825 SGNYFFTATFAIEATLKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLENVQGLSV 880
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 881 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 933
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDF+++ ++ + L G + A
Sbjct: 1316 IFTVIFFIEMLIKWLALGFK----EYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFK 1371
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1372 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1430
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-- 122
+++ +IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1626 LDTLNLIFIVIFSSECLMKIFAL-----RYHYFVEPWNLFDFVVVILS--ILGLVLSDII 1678
Query: 123 ---------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA
Sbjct: 1679 EKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFA 1738
Query: 174 LMGL 177
+ G+
Sbjct: 1739 IFGM 1742
>gi|30350262|gb|AAP20106.1| voltage-sensitive sodium channel alpha-subunit [Pediculus humanus]
Length = 2051
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATNAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP +ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDFIVI+LAYVTMGIDL
Sbjct: 162 TTPAVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFIVISLAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D W F VA+ + P LFI I+ N + M + ++
Sbjct: 768 FCVWDCCWAWLKFQEF--VALLVF-DPFVELFITLCIVVNTLFMALDHHDMDKDMDRALK 824
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 825 SGNYFFTATFAIEATLKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLENVQGLSV 880
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 881 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 933
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDF+++ ++ + L G + A
Sbjct: 1316 IFTVIFFIEMLIKWLALGFK----EYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFK 1371
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1372 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1430
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-- 122
+++ +IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1626 LDTLNLIFIVIFSSECLMKIFAL-----RYHYFVEPWNLFDFVVVILS--ILGLVLSDII 1678
Query: 123 ---------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA
Sbjct: 1679 EKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFA 1738
Query: 174 LMGL 177
+ G+
Sbjct: 1739 IFGM 1742
>gi|3320596|gb|AAC26513.1| voltage-gated sodium channel alpha subunit [Heliothis virescens]
gi|3320623|gb|AAC26517.1| voltage-gated sodium channel alpha subunit [Heliothis virescens]
Length = 1695
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++ +
Sbjct: 1097 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1152
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1153 NFVAGLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1212
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1213 WLIFAIMGVQLFAGK 1227
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-VIF 72
F D W+ F + VA+ + P LFI I+ N + M + + E +
Sbjct: 569 FCVWDCCWLWLEFQ--KYVALLVF-DPFVELFITLCIVVNTLFMALDHHDMDKDMERALK 625
Query: 73 TGIYTFES--AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTF 129
+G Y F + +K M + + Y ++ WN DFI++AL+ + +G++ + L+ LR+F
Sbjct: 626 SGNYFFTATFGIKAMLKLVAMSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSF 685
Query: 130 RVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 686 RLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 734
>gi|50080864|gb|AAT69680.1| voltage-dependent para-like sodium channel, partial [Aedes
albopictus]
Length = 2058
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTILTNCILMIMP
Sbjct: 89 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILTNCILMIMP 148
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 149 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 209 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 266
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1253 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1308
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1309 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1368
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1369 WLIFAIMGVQLFAGK 1383
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 744 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMERALK 800
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 801 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 856
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 857 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 909
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1584 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1636
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1637 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1695
>gi|91795212|gb|ABE60888.1| voltage-gated sodium channel alpha subunit [Helicoverpa armigera]
Length = 393
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
>gi|157118431|ref|XP_001653186.1| sodium channel protein para [Aedes aegypti]
gi|108875709|gb|EAT39934.1| AAEL008297-PA, partial [Aedes aegypti]
Length = 915
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/178 (95%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTILTNCILMIMP
Sbjct: 64 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILTNCILMIMP 123
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 124 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 183
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 184 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 241
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 737 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMERALK 793
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 794 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 849
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 850 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 902
>gi|383858788|ref|XP_003704881.1| PREDICTED: sodium channel protein para-like isoform 4 [Megachile
rotundata]
Length = 2044
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFII+TIL NC+LMIMP
Sbjct: 113 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIISTILVNCVLMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP IESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPVIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1328 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1383
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1384 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1442
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F +R ++ P LFI I+ N + M + + E +
Sbjct: 784 FCVWDCCWLWLEF---QRYVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 840
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A+ Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 841 TGNYFFTATFGIEATLKLIAKS----PKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 896
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 897 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 949
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1643 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1695
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1696 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1754
>gi|209361483|gb|ACI43362.1| voltage-sensitive sodium channel alpha-subunit [Cimex lectularius]
Length = 2027
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSATDALW+LDPFNPIRRVAIYILVHPLFSLFII TIL NC+LMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIIFTILLNCVLMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++ +
Sbjct: 1303 LPSRPILQDILYYMDRIFTVIFFLEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1358
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+ G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1359 NFTASMLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1418
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1419 WLIFAIMGVQLFAGK 1433
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
+G DIF +W+ +++ +I+ P LFI I+ N + M +
Sbjct: 775 QGIDIFCVWDCCGVWL-----KFQKLVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDK 829
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI- 118
++S F+ + E+A+K++A + Y ++ WN DFI++AL+ + + +
Sbjct: 830 ELEKALKSGNYFFSATFGIEAAMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELSLE 885
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 886 GIQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVM 942
Query: 176 GLQ 178
G+Q
Sbjct: 943 GMQ 945
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1634 MIFIVIFSSECLLKIFAL-----RYHYFKEPWNLFDFVVVLLS--ILGLVLSDIIEKYFV 1686
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1687 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1745
>gi|383858784|ref|XP_003704879.1| PREDICTED: sodium channel protein para-like isoform 2 [Megachile
rotundata]
Length = 2036
Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFII+TIL NC+LMIMP
Sbjct: 113 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIISTILVNCVLMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP IESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPVIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1320 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1375
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1376 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1434
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F +R ++ P LFI I+ N + M + + E +
Sbjct: 766 FCVWDCCWLWLEF---QRYVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 822
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A+ Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 823 TGNYFFTATFGIEATLKLIAKS----PKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 878
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 879 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 931
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1635 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1687
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1688 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1746
>gi|383858782|ref|XP_003704878.1| PREDICTED: sodium channel protein para-like isoform 1 [Megachile
rotundata]
Length = 2050
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFII+TIL NC+LMIMP
Sbjct: 113 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIISTILVNCVLMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP IESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPVIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1334 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1389
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1390 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1448
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F +R ++ P LFI I+ N + M + + E +
Sbjct: 773 FCVWDCCWLWLEF---QRYVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 829
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A+ Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 830 TGNYFFTATFGIEATLKLIAKS----PKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 885
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 886 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 938
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1649 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1701
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1702 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1760
>gi|209361485|gb|ACI43363.1| voltage-sensitive sodium channel alpha-subunit [Cimex lectularius]
Length = 2027
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSATDALW+LDPFNPIRRVAIYILVHPLFSLFII TIL NC+LMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATDALWILDPFNPIRRVAIYILVHPLFSLFIIFTILLNCVLMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++ +
Sbjct: 1303 LPSRPILQDILYYMDRIFTVIFFLEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1358
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+ G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1359 NFTASMLGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1418
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1419 WLIFAIMGVQLFAGK 1433
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
+G DIF +W+ +++ +I+ P LFI I+ N + M +
Sbjct: 775 QGIDIFCVWDCCGVWL-----KFQKLVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDK 829
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI- 118
++S F+ + E+A+K++A + Y ++ WN DFI++AL+ + + +
Sbjct: 830 ELEKALKSGNYFFSATFGIEAAMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELSLE 885
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 886 GIQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGAIGNLTFVLCIIIF---IFAVM 942
Query: 176 GLQ 178
G+Q
Sbjct: 943 GMQ 945
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1634 MIFIVIFSSECLLKIFAL-----RYHYFKEPWNLFDFVVVLLS--ILGLVLSDIIEKYFV 1686
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1687 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1745
>gi|189172239|gb|ACD80424.1| para sodium channel alpha subunit [Bombyx mori]
Length = 1851
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRAL TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALNTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1272 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1327
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1328 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1387
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1388 WLIFAIMGVQLFAGK 1402
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 739 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHNMDK 793
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 794 DMDKALKSGNYFFTATFGIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 849
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 850 GVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVM 906
Query: 176 GLQ 178
G+Q
Sbjct: 907 GMQ 909
>gi|197927081|dbj|BAF37096.2| voltage-dependent para-like sodium channel splicing variant 2
[Plutella xylostella]
Length = 1890
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVS+G+DIFRFSATDALW+LDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSRGRDIFRFSATDALWMLDPFNPIRRVAIYILVHPLFSFFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1270 LPHRPILQDILYYMDRIFTVIFFLEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1325
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1326 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1385
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1386 WLIFAIMGVQLFAGK 1400
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG DIF D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 723 KGIDIF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHDMDR 777
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 778 DMEKALKSGNYFFTATFAIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 833
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 834 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLIFVLCIIIF---IFAVM 890
Query: 176 GLQ 178
G+Q
Sbjct: 891 GMQ 893
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARG 88
I+ F + I+ I N + M + ES V IF I++ E K+ A
Sbjct: 1560 IVTDKKFDMIIMLFIGLNMLTMTLDHYQQAESFSVVLDYLNMIFIVIFSSECMSKIFAL- 1618
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN--------LAALRTFRVLRALKTVA 139
+ Y D WNW DF+V+ + +++ + D+ L +R +V R L+ V
Sbjct: 1619 ----RYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVK 1674
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 GAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1712
>gi|383858786|ref|XP_003704880.1| PREDICTED: sodium channel protein para-like isoform 3 [Megachile
rotundata]
Length = 2023
Score = 338 bits (868), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFII+TIL NC+LMIMP
Sbjct: 102 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIISTILVNCVLMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP IESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPVIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1307 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1362
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1363 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1421
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F +R ++ P LFI I+ N + M + + E +
Sbjct: 763 FCVWDCCWLWLEF---QRYVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 819
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A+ Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 820 TGNYFFTATFGIEATLKLIAKS----PKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 875
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 876 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 928
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1622 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1674
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1733
>gi|258674489|gb|ACV87001.1| paralytic [Bombyx mori]
Length = 2038
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRAL TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALNTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1311 LPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1366
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1367 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1426
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1427 WLIFAIMGVQLFAGK 1441
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG D F D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 778 KGIDFF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHNMDK 832
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 833 DMDKALKSGNYFFTATFGIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 888
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 889 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVM 945
Query: 176 GLQ 178
G+Q
Sbjct: 946 GMQ 948
>gi|197927077|dbj|BAF37093.2| voltage-dependent para-like sodium channel splicing variant 1
[Plutella xylostella]
Length = 1890
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVS+G+DIFRFSATDALW+LDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSRGRDIFRFSATDALWMLDPFNPIRRVAIYILVHPLFSFFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ L+ V
Sbjct: 1270 LPHRPILQDILYYMDRIFTVIFFLEMLIKWLALGFQ----KYFTNAWCWLDFIIVMLSLV 1325
Query: 115 TMGI------DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
G D+ ++RT R LR L+ V+ G++ +V A+++++ ++ +V+++ +
Sbjct: 1326 NHGAVMAGADDIPAFRSMRTLRALRPLRAVSRWEGMRVVVNALVQAIPSIFNVLLVCLIF 1385
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1386 WLIFAIMGVQLFAGK 1400
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG DIF D W+ F + VA+ + P LFI I+ N + M +
Sbjct: 723 KGIDIF--CVWDCCWLWLEFQ--KYVALLVF-DPFVELFITLCIVVNTLFMALDHHDMDR 777
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 778 DMEKALKSGNYFFTATFAIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 833
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 834 GVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVM 890
Query: 176 GLQ 178
G+Q
Sbjct: 891 GMQ 893
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARG 88
I+ F + I+ I N + M + ES V IF I++ E K+ A
Sbjct: 1560 IVTDKKFDMIIMLFIGLNMLTMTLDHYQQAESFSVVLDYLNMIFIVIFSSECMSKIFAL- 1618
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN--------LAALRTFRVLRALKTVA 139
+ Y D WNW DF+V+ + +++ + D+ L +R +V R L+ V
Sbjct: 1619 ----RYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVK 1674
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 GAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1712
>gi|197927078|dbj|BAF37094.2| voltage-dependent para-like sodium channel splicing variant 2
[Plutella xylostella]
Length = 1890
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVS+G+DIFRFSATDALW+LDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSRGRDIFRFSATDALWMLDPFNPIRRVAIYILVHPLFSFFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-- 112
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ ++
Sbjct: 1270 LPHRPILQDILYYMDRIFTVIFFLEMLIKWLALGFQ----KYFTNAWCWLDFIIVMVSLI 1325
Query: 113 -YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+V G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1326 NFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1385
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1386 WLIFAIMGVQLFAGK 1400
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG DIF D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 723 KGIDIF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHDMDR 777
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 778 DMEKALKSGNYFFTATFAIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 833
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 834 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVM 890
Query: 176 GLQ 178
G+Q
Sbjct: 891 GMQ 893
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARG 88
I+ F + I+ I N + M + ES V IF I++ E K+ A
Sbjct: 1560 IVTDKKFDMIIMLFIGLNMLTMTLDHYQQAESFSVVLDYLNMIFIVIFSSECMSKIFAL- 1618
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN--------LAALRTFRVLRALKTVA 139
+ Y D WNW DF+V+ + +++ + D+ L +R +V R L+ V
Sbjct: 1619 ----RYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVK 1674
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 GAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1712
>gi|197927080|dbj|BAF37095.2| voltage-dependent para-like sodium channel splicing variant 1
[Plutella xylostella]
Length = 1890
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/178 (93%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVS+G+DIFRFSATDALW+LDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSRGRDIFRFSATDALWMLDPFNPIRRVAIYILVHPLFSFFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF Y +AW WLDFI++ L+ V
Sbjct: 1270 LPHRPILQDILYYMDRIFTVIFFLEMLIKWLALGFQ----KYFTNAWCWLDFIIVMLSLV 1325
Query: 115 TMGI------DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
G D+ ++RT R LR L+ V+ G++ +V A+++++ ++ +V+++ +
Sbjct: 1326 NHGAVMAGADDIPAFRSMRTLRALRPLRAVSRWEGMRVVVNALVQAIPSIFNVLLVCLIF 1385
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1386 WLIFAIMGVQLFAGK 1400
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG----- 61
KG DIF D W+ F + VA+ ++ P LFI I+ N + M +
Sbjct: 723 KGIDIF--CVWDCCWLWLEFQ--KYVAL-LVFDPFVELFITLCIVVNTLFMALDHHDMDR 777
Query: 62 --TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++
Sbjct: 778 DMEKALKSGNYFFTATFAIEATLKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 833
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 834 GVQGLSVLRSFRLLRVFKLAKSWPALNLIISIMGRTVGALGNLTFVLCIIIF---IFAVM 890
Query: 176 GLQ 178
G+Q
Sbjct: 891 GMQ 893
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARG 88
I+ F + I+ I N + M + ES V IF I++ E K+ A
Sbjct: 1560 IVTDKKFDMIIMLFIGLNMLTMTLDHYQQAESFSVVLDYLNMIFIVIFSSECMSKIFAL- 1618
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN--------LAALRTFRVLRALKTVA 139
+ Y D WNW DF+V+ + +++ + D+ L +R +V R L+ V
Sbjct: 1619 ----RYHYFVDPWNWFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVK 1674
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1675 GAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1712
>gi|148291097|emb|CAM12801.1| voltage-gated sodium channel alpha subunit [Anopheles gambiae]
Length = 2139
Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1329 LPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV----YFTNAWCWLDFIIVMVSLI 1384
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1385 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1444
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1445 WLIFAIMGVQLFAGK 1459
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 785 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMEKALK 841
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 842 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 897
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 898 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 950
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1660 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1712
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1713 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1771
>gi|307210096|gb|EFN86793.1| Sodium channel protein para [Harpegnathos saltator]
Length = 2055
Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 102 TFVVVSKGKDIFRFSATNAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFT IYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 TTPTIESTEVIFTCIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F ++ ++ P LFI I+ N + M + + E +
Sbjct: 761 FCVWDCCWLWLEF---QKYVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 817
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A + Y ++ WN DFI++ L+ V +G++ + L+
Sbjct: 818 TGNYFFTATFGIEATLKLIA----MSPKYYFQEGWNIFDFIIVVLSLVELGLEGVQGLSV 873
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 874 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 926
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 51/160 (31%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG------------- 117
IFT I+ E +K +A GF Y +AW WLDFI++ L+ + +G
Sbjct: 1302 IFTVIFFLEMLIKWLALGFK----KYFTNAWCWLDFIIVMLSLINLGAIWAGAADIPAFR 1357
Query: 118 ---------------------IDLGNLAA-------------LRTFRVLRALKTVAIVPG 143
+ L N A +RT R LR L+ ++ + G
Sbjct: 1358 SMRTLRALRPLRAVSRWEGMRVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQG 1417
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1418 MRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1457
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1658 MIFIVIFTSECLLKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1710
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1711 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1769
>gi|134289048|tpg|DAA05879.1| TPA_inf: voltage-gated sodium channel alpha subunit-like protein
[Bombyx mori]
Length = 394
Score = 338 bits (867), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+ALW+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 113 TFVVISKGKDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRAL TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALNTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
>gi|158298034|ref|XP_318122.4| AGAP004707-PA [Anopheles gambiae str. PEST]
gi|157014614|gb|EAA43760.4| AGAP004707-PA [Anopheles gambiae str. PEST]
Length = 2118
Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 96 TFVVISKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 155
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 156 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 215
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 216 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 273
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1305 LPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV----YFTNAWCWLDFIIVMVSLI 1360
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1361 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1420
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1421 WLIFAIMGVQLFAGK 1435
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 761 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMEKALK 817
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 818 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 873
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 874 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 926
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1639 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1691
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1692 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1750
>gi|158298038|ref|XP_554647.3| AGAP004707-PC [Anopheles gambiae str. PEST]
gi|157014616|gb|EAL39442.3| AGAP004707-PC [Anopheles gambiae str. PEST]
Length = 2092
Score = 338 bits (866), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 96 TFVVISKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 155
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 156 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 215
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 216 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 273
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1279 LPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV----YFTNAWCWLDFIIVMVSLI 1334
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1335 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1394
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1395 WLIFAIMGVQLFAGK 1409
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 761 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMEKALK 817
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 818 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 873
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 874 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 926
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1613 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1665
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1666 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1724
>gi|158298036|ref|XP_001689103.1| AGAP004707-PB [Anopheles gambiae str. PEST]
gi|157014615|gb|EDO63520.1| AGAP004707-PB [Anopheles gambiae str. PEST]
Length = 2092
Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 175/178 (98%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 96 TFVVISKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 155
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 156 TTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 215
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 216 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 273
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1279 LPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV----YFTNAWCWLDFIIVMVSLI 1334
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1335 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1394
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1395 WLIFAIMGVQLFAGK 1409
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 761 FCVWDCCWVWLKF---QEWVAFIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMEKALK 817
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 818 SGNYFFTATFAIEATMKLIA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 873
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 874 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 926
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1613 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1665
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1666 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1724
>gi|192337580|gb|ACF04199.1| sodium channel [Culex quinquefasciatus]
Length = 2101
Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1311 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1366
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1367 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1426
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1427 WLIFAIMGVQLFAGK 1441
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 793 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 849
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 850 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 905
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 906 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 958
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 28 PIRR---VAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYT 77
P RR + I + F + I+ I N + M + E+ +IF I++
Sbjct: 1590 PKRRPQAIVFEICTNKKFDMIIMLFIGFNMLTMTLDHYKQTETFSAVLDYLNMIFICIFS 1649
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-----------LAAL 126
E +K+ A + Y + WN DF+V+ L+ +G+ L + L +
Sbjct: 1650 SECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFVSPTLLRVV 1702
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1703 RVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1753
>gi|192337582|gb|ACF04200.1| sodium channel [Culex quinquefasciatus]
Length = 2101
Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1311 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1366
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1367 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1426
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1427 WLIFAIMGVQLFAGK 1441
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 793 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 849
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 850 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 905
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 906 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 958
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1642 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1694
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1695 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1753
>gi|148277530|tpe|CAM31894.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 102 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1339 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1394
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1395 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1454
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1455 WLIFAIMGVQLFAGK 1469
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 782 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 838
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 839 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 894
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 895 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 947
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1670 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1722
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1723 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1781
>gi|148277528|tpe|CAM31893.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 102 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1339 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1394
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1395 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1454
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1455 WLIFAIMGVQLFAGK 1469
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 782 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 838
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 839 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 894
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 895 LRSFRLLRVFKLAKSWPTLNLLMSIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 947
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1670 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1722
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1723 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1781
>gi|401728827|gb|AFQ00697.1| sodium channel [Culex quinquefasciatus]
Length = 2092
Score = 338 bits (866), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y DAW WLDFI++ ++ +
Sbjct: 1302 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTDAWCWLDFIIVMVSLI 1357
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1358 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1417
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1418 WLIFAIMGVQLFAGK 1432
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 768 FCVWDCCWVWLKF---QEWGSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 824
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 825 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 880
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 881 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 933
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1633 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1685
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1686 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1744
>gi|290349620|dbj|BAI77918.1| para-sodium channel [Culex pipiens pallens]
Length = 2147
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1358 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1413
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1414 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1473
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1474 WLIFAIMGVQLFAGK 1488
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 801 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 857
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 858 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 913
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 914 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 966
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1689 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1741
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1742 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1800
>gi|290349618|dbj|BAI77917.1| para-sodium channel [Culex quinquefasciatus]
Length = 2149
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1358 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1413
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1414 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1473
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1474 WLIFAIMGVQLFAGK 1488
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 801 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 857
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 858 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 913
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 914 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 966
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1689 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1741
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1742 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1800
>gi|192337584|gb|ACF04201.1| sodium channel [Culex quinquefasciatus]
Length = 2101
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1311 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1366
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1367 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1426
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1427 WLIFAIMGVQLFAGK 1441
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 793 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 849
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 850 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 905
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 906 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 958
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1642 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1694
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1695 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1753
>gi|148277536|tpe|CAM31891.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 102 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ L+ +
Sbjct: 1339 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMLSLI 1394
Query: 115 TM------GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+ D+ ++RT R LR L+ V+ G++ +V A+++++ ++ +V+++ +
Sbjct: 1395 NLFAIWVGAADIPAFRSMRTLRALRPLRAVSRWEGMRVVVNALVQAIPSIFNVLLVCLIF 1454
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1455 WLIFAIMGVQLFAGK 1469
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 782 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 838
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 839 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 894
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 895 LRSFRLLRVFKLAKSWPTLNLLMSIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 947
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1670 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1722
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1723 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1781
>gi|148277526|tpe|CAM31892.1| TPA: voltage-gated sodium channel alpha subunit [Culex
quinquefasciatus]
Length = 2129
Score = 337 bits (865), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 169/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 102 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ L+ +
Sbjct: 1339 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMLSLI 1394
Query: 115 TM------GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
+ D+ ++RT R LR L+ V+ G++ +V A+++++ ++ +V+++ +
Sbjct: 1395 NLFAIWVGAADIPAFRSMRTLRALRPLRAVSRWEGMRVVVNALVQAIPSIFNVLLVCLIF 1454
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1455 WLIFAIMGVQLFAGK 1469
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 782 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 838
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 839 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 894
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 895 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 947
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1670 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1722
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1723 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1781
>gi|1842214|gb|AAB47605.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2104
Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 103 TFVVISKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 21/179 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1278 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPDRPVMQDILYYMDRIFTVIFFLE 1337
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + G+ D+ ++RT R LR
Sbjct: 1338 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALR 1393
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK--KSDESHD 190
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK K + +D
Sbjct: 1394 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGND 1452
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 9 KDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTI 65
K I F D WV F + +I+ P LFI I+ N + M M P +
Sbjct: 775 KGIEIFCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTMFMAMDHHDMNPEL 831
Query: 66 E----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-L 120
E S FT + E+++K+MA + Y ++ WN DFI++AL+ + +G++ +
Sbjct: 832 EKVLKSGNYFFTATFAIEASMKLMA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGV 887
Query: 121 GNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+
Sbjct: 888 QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGM 944
Query: 178 Q 178
Q
Sbjct: 945 Q 945
>gi|56548475|gb|AAV93244.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2104
Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 103 TFVVISKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 21/179 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1278 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPDRPVMQDILYYMDRIFTVIFFLE 1337
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + G+ D+ ++RT R LR
Sbjct: 1338 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALR 1393
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK--KSDESHD 190
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK K + +D
Sbjct: 1394 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGND 1452
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 9 KDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTI 65
K I F D WV F + +I+ P LFI I+ N + M M P +
Sbjct: 775 KGIEIFCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTMFMAMDHHDMNPEL 831
Query: 66 E----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-L 120
E S FT + E+++K+MA + Y ++ WN DFI++AL+ + +G++ +
Sbjct: 832 EKVLKSGNYFFTATFAIEASMKLMA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGV 887
Query: 121 GNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+
Sbjct: 888 QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGM 944
Query: 178 Q 178
Q
Sbjct: 945 Q 945
>gi|1783373|gb|AAB47604.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2105
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 103 TFVVISKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 21/179 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1278 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPDRPVMQDILYYMDRIFTVIFFLE 1337
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + G+ D+ ++RT R LR
Sbjct: 1338 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALR 1393
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK--KSDESHD 190
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK K + +D
Sbjct: 1394 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGND 1452
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 9 KDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTI 65
K I F D WV F + +I+ P LFI I+ N + M M P +
Sbjct: 775 KGIEIFCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTMFMAMDHHDMNPEL 831
Query: 66 E----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-L 120
E S FT + E+++K+MA + Y ++ WN DFI++AL+ + +G++ +
Sbjct: 832 EKVLKSGNYFFTATFAIEASMKLMA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGV 887
Query: 121 GNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+
Sbjct: 888 QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGM 944
Query: 178 Q 178
Q
Sbjct: 945 Q 945
>gi|1550781|emb|CAA65448.1| voltage-sensitive sodium channel [Musca domestica]
Length = 2108
Score = 337 bits (863), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 174/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
Sbjct: 103 TFVVISKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 21/179 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1278 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPDRPVMQDILYYMDRIFTVIFFLE 1337
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + G+ D+ ++RT R LR
Sbjct: 1338 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLVAVWSGLNDIAVFRSMRTLRALR 1393
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK--KSDESHD 190
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK K + +D
Sbjct: 1394 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCKDGND 1452
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 21/181 (11%)
Query: 9 KDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTI 65
K I F D WV F + +I+ P LFI I+ N + M M P +
Sbjct: 775 KGIEIFCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTMFMAMDHHDMNPEL 831
Query: 66 E----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-L 120
E S FT + E+++K+MA + Y ++ WN DFI++AL+ + +G++ +
Sbjct: 832 EKVLKSGNYFFTATFAIEASMKLMA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGV 887
Query: 121 GNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+
Sbjct: 888 QGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGM 944
Query: 178 Q 178
Q
Sbjct: 945 Q 945
>gi|320542230|ref|NP_001188652.1| paralytic, isoform BE [Drosophila melanogaster]
gi|318069442|gb|ADV37734.1| paralytic, isoform BE [Drosophila melanogaster]
Length = 917
Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 17/137 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 768 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 822
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-LAYVT 115
++S FT + E+ +K+MA + Y ++ WN DFI++A
Sbjct: 823 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 878
Query: 116 MGIDLGNLAALRTFRVL 132
+ L+ LR+FR++
Sbjct: 879 GLEGVQGLSVLRSFRLI 895
>gi|198468369|ref|XP_001354677.2| GA22114 [Drosophila pseudoobscura pseudoobscura]
gi|198146382|gb|EAL31732.2| GA22114 [Drosophila pseudoobscura pseudoobscura]
Length = 2053
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 18/154 (11%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESAVKVMARG 88
I+ P LFI I+ N + M M + E I FT + E+ +K+ A
Sbjct: 806 IVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKSGNYFFTATFAIEATMKLCA-- 863
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAIVPGLK-- 145
+ Y ++ WN DFI++AL+ + +G++ + L+ LR+FR+LR K P L
Sbjct: 864 --MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 921
Query: 146 -TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 922 ISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 952
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 60/211 (28%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1153 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1212
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------------------------ 115
+K +A GF + Y +AW WLDF+++ L+ +
Sbjct: 1213 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1268
Query: 116 ----------MGIDLGNLAA-------------LRTFRVLRALKTVAIVPGLKTIVGAVI 152
M + L N A +RT R LR L+ ++ + G++ +V A++
Sbjct: 1269 PLRAVSRWEGMKVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALV 1328
Query: 153 ESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1329 QAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1359
>gi|401728829|gb|AFQ00698.1| sodium channel [Culex quinquefasciatus]
Length = 2089
Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAV ESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVTESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1299 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1354
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1355 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1414
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1415 WLIFAIMGVQLFAGK 1429
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 781 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 837
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 838 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 893
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 894 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 946
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 28 PIRR---VAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYT 77
P RR + I + F + I+ I N + M + E+ +IF I++
Sbjct: 1578 PKRRPQAIVFEICTNKKFDMIIMLFIGFNMLTMTLDHYKQTETFSAVLDYLNMIFICIFS 1637
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-----------LAAL 126
E +K+ A + Y + WN DF+V+ L+ +G+ L + L +
Sbjct: 1638 SECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFVSPTLLRVV 1690
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1691 RVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1741
>gi|414091065|gb|AFW98420.1| sodium channel Na-Lv8 [Culex quinquefasciatus]
Length = 2091
Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVA VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRALKTVATVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1301 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1356
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1357 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1416
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1417 WLIFAIMGVQLFAGK 1431
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 793 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 849
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 850 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 905
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 906 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 958
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 28 PIRR---VAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYT 77
P RR + I + F + I+ I N + M + E+ +IF I++
Sbjct: 1580 PKRRPQAIVFEICTNKKFDMIIMLFIGFNMLTMTLDHYKQTETFSAVLGYLNMIFICIFS 1639
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-----------LAAL 126
E +K+ A + Y + WN DF+V+ L+ +G+ L + L +
Sbjct: 1640 SECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFVSPTLLRVV 1692
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1693 RVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1743
>gi|320542226|ref|NP_001188650.1| paralytic, isoform BC [Drosophila melanogaster]
gi|318069440|gb|ADV37732.1| paralytic, isoform BC [Drosophila melanogaster]
Length = 872
Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 17/137 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 723 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 777
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-LAYVT 115
++S FT + E+ +K+MA + Y ++ WN DFI++A
Sbjct: 778 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 833
Query: 116 MGIDLGNLAALRTFRVL 132
+ L+ LR+FR++
Sbjct: 834 GLEGVQGLSVLRSFRLI 850
>gi|195447454|ref|XP_002071221.1| GK25247 [Drosophila willistoni]
gi|194167306|gb|EDW82207.1| GK25247 [Drosophila willistoni]
Length = 2201
Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP--- 63
KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 790 KGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNK 844
Query: 64 ----TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K+ A + Y ++ WN DFI++AL+ + +G++
Sbjct: 845 EMERVLKSGNYFFTATFAIEATMKLCA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 900
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 901 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVM 957
Query: 176 GLQ 178
G+Q
Sbjct: 958 GMQ 960
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 60/211 (28%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1294 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1353
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------------------------ 115
+K +A GF + Y +AW WLDF+++ L+ +
Sbjct: 1354 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1409
Query: 116 ----------MGIDLGNLAA-------------LRTFRVLRALKTVAIVPGLKTIVGAVI 152
M + L N A +RT R LR L+ ++ + G++ +V A++
Sbjct: 1410 PLRAVSRWEGMKVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALV 1469
Query: 153 ESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1470 QAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1500
>gi|320542128|ref|NP_001188601.1| paralytic, isoform F [Drosophila melanogaster]
gi|318069391|gb|ADV37683.1| paralytic, isoform F [Drosophila melanogaster]
Length = 2108
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1267 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1326
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1327 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1382
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1383 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1432
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542126|ref|NP_001188600.1| paralytic, isoform E [Drosophila melanogaster]
gi|318069390|gb|ADV37682.1| paralytic, isoform E [Drosophila melanogaster]
Length = 2108
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1267 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1326
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1327 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1382
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1383 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1432
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|380690198|gb|AEX08661.1| voltage-gated sodium channel [Bactrocera dorsalis]
Length = 2134
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 89/165 (53%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1313 LRPKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1372
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ + L G + A +RT R LR
Sbjct: 1373 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLAGAGGIQAFKTMRTLRALR 1428
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q
Sbjct: 1429 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQ 1473
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 22/189 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D WV F + I+ P LFI I+ N + M M + E I
Sbjct: 793 FCVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMEKILK 849
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K+MA + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 850 SGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 905
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
LR+FR+LR K P L +I+G + ++ NL V+ + F +FA+MG+Q G
Sbjct: 906 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIITF---IFAVMGMQ-LFG 961
Query: 183 KKSDESHDK 191
K ++ D+
Sbjct: 962 KNYTDNQDR 970
>gi|320542136|ref|NP_001188605.1| paralytic, isoform J [Drosophila melanogaster]
gi|318069395|gb|ADV37687.1| paralytic, isoform J [Drosophila melanogaster]
Length = 2100
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1259 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1318
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1319 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1374
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1375 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1424
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 779 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 833
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 834 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 889
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 890 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 946
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 947 AVMGMQ 952
>gi|320542142|ref|NP_001188608.1| paralytic, isoform M [Drosophila melanogaster]
gi|318069398|gb|ADV37690.1| paralytic, isoform M [Drosophila melanogaster]
Length = 2100
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1259 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1318
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1319 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1374
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1375 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1424
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 779 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 833
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 834 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 889
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 890 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 946
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 947 AVMGMQ 952
>gi|320542172|ref|NP_001188623.1| paralytic, isoform AB [Drosophila melanogaster]
gi|318069413|gb|ADV37705.1| paralytic, isoform AB [Drosophila melanogaster]
Length = 2086
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1245 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1304
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1305 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1360
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1361 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1410
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|320542158|ref|NP_001188616.1| paralytic, isoform U [Drosophila melanogaster]
gi|318069406|gb|ADV37698.1| paralytic, isoform U [Drosophila melanogaster]
Length = 2118
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1277 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1336
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1337 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1392
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1393 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1442
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542140|ref|NP_001188607.1| paralytic, isoform L [Drosophila melanogaster]
gi|318069397|gb|ADV37689.1| paralytic, isoform L [Drosophila melanogaster]
Length = 2087
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1246 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1305
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1306 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1361
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1362 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1411
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 766 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 820
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 821 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 876
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 877 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 933
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 934 AVMGMQ 939
>gi|320542130|ref|NP_001188602.1| paralytic, isoform G [Drosophila melanogaster]
gi|318069392|gb|ADV37684.1| paralytic, isoform G [Drosophila melanogaster]
Length = 2087
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1246 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1305
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1306 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1361
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1362 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1411
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 766 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 820
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 821 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 876
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 877 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 933
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 934 AVMGMQ 939
>gi|320542194|ref|NP_001188634.1| paralytic, isoform AM [Drosophila melanogaster]
gi|318069424|gb|ADV37716.1| paralytic, isoform AM [Drosophila melanogaster]
Length = 2083
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1242 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1301
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1302 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1357
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1358 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1407
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 752 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 806
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 807 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 862
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 863 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 919
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 920 AVMGMQ 925
>gi|320542202|ref|NP_001188638.1| paralytic, isoform AQ [Drosophila melanogaster]
gi|318069428|gb|ADV37720.1| paralytic, isoform AQ [Drosophila melanogaster]
Length = 2089
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1248 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1307
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1308 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1363
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1364 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1413
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 758 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 812
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 813 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 868
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 869 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 925
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 926 AVMGMQ 931
>gi|320542196|ref|NP_001188635.1| paralytic, isoform AN [Drosophila melanogaster]
gi|318069425|gb|ADV37717.1| paralytic, isoform AN [Drosophila melanogaster]
Length = 2143
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1302 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1361
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1362 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1417
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1418 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1467
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542146|ref|NP_001188610.1| paralytic, isoform O [Drosophila melanogaster]
gi|318069400|gb|ADV37692.1| paralytic, isoform O [Drosophila melanogaster]
Length = 2092
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1251 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1310
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1311 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1366
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1367 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1416
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 758 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 812
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 813 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 868
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 869 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 925
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 926 AVMGMQ 931
>gi|24642537|ref|NP_523371.2| paralytic, isoform A [Drosophila melanogaster]
gi|150421666|sp|P35500.3|SCNA_DROME RecName: Full=Sodium channel protein para; AltName: Full=Protein
paralytic; AltName: Full=Sodium channel 1; Short=DmNav1
gi|22832381|gb|AAF48617.2| paralytic, isoform A [Drosophila melanogaster]
Length = 2131
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1405
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542192|ref|NP_001188633.1| paralytic, isoform AL [Drosophila melanogaster]
gi|318069423|gb|ADV37715.1| paralytic, isoform AL [Drosophila melanogaster]
Length = 2111
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1270 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1329
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1330 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1385
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1386 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1435
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|194768088|ref|XP_001966146.1| GF19518 [Drosophila ananassae]
gi|190623031|gb|EDV38555.1| GF19518 [Drosophila ananassae]
Length = 2136
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1405
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DF ++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFFIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542154|ref|NP_001188614.1| paralytic, isoform S [Drosophila melanogaster]
gi|318069404|gb|ADV37696.1| paralytic, isoform S [Drosophila melanogaster]
Length = 2100
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1259 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1318
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1319 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1374
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1375 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1424
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 766 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 820
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 821 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 876
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 877 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 933
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 934 AVMGMQ 939
>gi|320542132|ref|NP_001188603.1| paralytic, isoform H [Drosophila melanogaster]
gi|320542190|ref|NP_001188632.1| paralytic, isoform AK [Drosophila melanogaster]
gi|318069393|gb|ADV37685.1| paralytic, isoform H [Drosophila melanogaster]
gi|318069422|gb|ADV37714.1| paralytic, isoform AK [Drosophila melanogaster]
Length = 2097
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1256 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1315
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1316 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1371
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1372 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1421
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542198|ref|NP_001188636.1| paralytic, isoform AO [Drosophila melanogaster]
gi|318069426|gb|ADV37718.1| paralytic, isoform AO [Drosophila melanogaster]
Length = 2113
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1272 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1331
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1332 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1387
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1388 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1437
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 779 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 833
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 834 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 889
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 890 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 946
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 947 AVMGMQ 952
>gi|320542148|ref|NP_001188611.1| paralytic, isoform P [Drosophila melanogaster]
gi|318069401|gb|ADV37693.1| paralytic, isoform P [Drosophila melanogaster]
Length = 2121
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1280 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1339
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1340 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1395
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1396 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1445
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542152|ref|NP_001188613.1| paralytic, isoform R [Drosophila melanogaster]
gi|318069403|gb|ADV37695.1| paralytic, isoform R [Drosophila melanogaster]
Length = 2079
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1238 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1297
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1298 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1353
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1354 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1403
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 758 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 812
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 813 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 868
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 869 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 925
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 926 AVMGMQ 931
>gi|320542138|ref|NP_001188606.1| paralytic, isoform K [Drosophila melanogaster]
gi|318069396|gb|ADV37688.1| paralytic, isoform K [Drosophila melanogaster]
Length = 2076
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1235 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1294
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1295 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1350
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1351 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1400
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|320542162|ref|NP_001188618.1| paralytic, isoform W [Drosophila melanogaster]
gi|318069408|gb|ADV37700.1| paralytic, isoform W [Drosophila melanogaster]
Length = 2102
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1261 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1320
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1321 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1376
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1377 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1426
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 758 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 812
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 813 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 868
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 869 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 925
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 926 AVMGMQ 931
>gi|320542156|ref|NP_001188615.1| paralytic, isoform T [Drosophila melanogaster]
gi|318069405|gb|ADV37697.1| paralytic, isoform T [Drosophila melanogaster]
Length = 2110
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1269 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1328
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1329 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1384
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1385 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1434
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 779 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 833
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 834 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 889
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 890 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 946
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 947 AVMGMQ 952
>gi|320542150|ref|NP_001188612.1| paralytic, isoform Q [Drosophila melanogaster]
gi|318069402|gb|ADV37694.1| paralytic, isoform Q [Drosophila melanogaster]
Length = 2076
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1235 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1294
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1295 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1350
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1351 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1400
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|320542170|ref|NP_001188622.1| paralytic, isoform AA [Drosophila melanogaster]
gi|320542174|ref|NP_001188624.1| paralytic, isoform AC [Drosophila melanogaster]
gi|318069412|gb|ADV37704.1| paralytic, isoform AA [Drosophila melanogaster]
gi|318069414|gb|ADV37706.1| paralytic, isoform AC [Drosophila melanogaster]
Length = 2084
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1243 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1302
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1303 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1358
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1359 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1408
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 763 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 817
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 818 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 873
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 874 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 930
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 931 AVMGMQ 936
>gi|320542182|ref|NP_001188628.1| paralytic, isoform AG [Drosophila melanogaster]
gi|318069418|gb|ADV37710.1| paralytic, isoform AG [Drosophila melanogaster]
Length = 2089
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1248 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1307
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1308 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1363
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1364 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1413
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|320542168|ref|NP_001188621.1| paralytic, isoform Z [Drosophila melanogaster]
gi|318069411|gb|ADV37703.1| paralytic, isoform Z [Drosophila melanogaster]
Length = 2089
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1248 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1307
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1308 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1363
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1364 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1413
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|195048329|ref|XP_001992511.1| GH24791 [Drosophila grimshawi]
gi|193893352|gb|EDV92218.1| GH24791 [Drosophila grimshawi]
Length = 2171
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 60/211 (28%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1292 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1351
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------------------------ 115
+K +A GF + Y +AW WLDF+++ L+ +
Sbjct: 1352 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1407
Query: 116 ----------MGIDLGNLAA-------------LRTFRVLRALKTVAIVPGLKTIVGAVI 152
M + L N A +RT R LR L+ ++ + G++ +V A++
Sbjct: 1408 PLRAVSRWEGMKVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALV 1467
Query: 153 ESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1468 QAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1498
>gi|320542144|ref|NP_001188609.1| paralytic, isoform N [Drosophila melanogaster]
gi|318069399|gb|ADV37691.1| paralytic, isoform N [Drosophila melanogaster]
Length = 2100
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1259 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1318
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1319 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1374
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1375 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1424
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 766 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 820
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 821 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 876
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 877 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 933
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 934 AVMGMQ 939
>gi|195132819|ref|XP_002010837.1| GI21488 [Drosophila mojavensis]
gi|193907625|gb|EDW06492.1| GI21488 [Drosophila mojavensis]
Length = 2168
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 60/211 (28%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1277 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1336
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------------------------ 115
+K +A GF + Y +AW WLDF+++ L+ +
Sbjct: 1337 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1392
Query: 116 ----------MGIDLGNLAA-------------LRTFRVLRALKTVAIVPGLKTIVGAVI 152
M + L N A +RT R LR L+ ++ + G++ +V A++
Sbjct: 1393 PLRAVSRWEGMKVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALV 1452
Query: 153 ESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1453 QAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1483
>gi|320542180|ref|NP_001188627.1| paralytic, isoform AF [Drosophila melanogaster]
gi|318069417|gb|ADV37709.1| paralytic, isoform AF [Drosophila melanogaster]
Length = 2110
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1269 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1328
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1329 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1384
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1385 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1434
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542134|ref|NP_001188604.1| paralytic, isoform I [Drosophila melanogaster]
gi|318069394|gb|ADV37686.1| paralytic, isoform I [Drosophila melanogaster]
Length = 2079
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1238 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1297
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1298 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1353
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1354 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1403
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 758 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 812
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 813 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 868
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 869 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 925
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 926 AVMGMQ 931
>gi|320542166|ref|NP_001188620.1| paralytic, isoform Y [Drosophila melanogaster]
gi|318069410|gb|ADV37702.1| paralytic, isoform Y [Drosophila melanogaster]
Length = 2138
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1297 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1356
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1357 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1412
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1413 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1462
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 779 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 833
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 834 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 889
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 890 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 946
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 947 AVMGMQ 952
>gi|195392740|ref|XP_002055012.1| paralytic [Drosophila virilis]
gi|194149522|gb|EDW65213.1| paralytic [Drosophila virilis]
Length = 2171
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 TIESTEVI-------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
+ E + FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKAGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 60/211 (28%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1292 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1351
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------------------------ 115
+K +A GF + Y +AW WLDF+++ L+ +
Sbjct: 1352 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1407
Query: 116 ----------MGIDLGNLAA-------------LRTFRVLRALKTVAIVPGLKTIVGAVI 152
M + L N A +RT R LR L+ ++ + G++ +V A++
Sbjct: 1408 PLRAVSRWEGMKVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALV 1467
Query: 153 ESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1468 QAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1498
>gi|116007172|ref|NP_001036281.1| paralytic, isoform C [Drosophila melanogaster]
gi|113193613|gb|ABI30986.1| paralytic, isoform C [Drosophila melanogaster]
Length = 2131
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1405
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542164|ref|NP_001188619.1| paralytic, isoform X [Drosophila melanogaster]
gi|318069409|gb|ADV37701.1| paralytic, isoform X [Drosophila melanogaster]
Length = 2125
Score = 335 bits (860), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1284 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1343
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1344 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1399
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1400 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1449
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 779 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 833
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 834 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 889
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 890 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 946
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 947 AVMGMQ 952
>gi|320542222|ref|NP_001188648.1| paralytic, isoform BA [Drosophila melanogaster]
gi|318069438|gb|ADV37730.1| paralytic, isoform BA [Drosophila melanogaster]
Length = 2132
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1291 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1350
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1351 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1406
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1407 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1456
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542224|ref|NP_001188649.1| paralytic, isoform BB [Drosophila melanogaster]
gi|318069439|gb|ADV37731.1| paralytic, isoform BB [Drosophila melanogaster]
Length = 2066
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542188|ref|NP_001188631.1| paralytic, isoform AJ [Drosophila melanogaster]
gi|318069421|gb|ADV37713.1| paralytic, isoform AJ [Drosophila melanogaster]
Length = 2132
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1291 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1350
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1351 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1406
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1407 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1456
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542178|ref|NP_001188626.1| paralytic, isoform AE [Drosophila melanogaster]
gi|318069416|gb|ADV37708.1| paralytic, isoform AE [Drosophila melanogaster]
Length = 2108
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1267 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1326
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + D+ ++RT R LR
Sbjct: 1327 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1382
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1383 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1432
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542218|ref|NP_001188646.1| paralytic, isoform AY [Drosophila melanogaster]
gi|318069436|gb|ADV37728.1| paralytic, isoform AY [Drosophila melanogaster]
Length = 2132
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1291 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1350
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + D+ ++RT R LR
Sbjct: 1351 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1406
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1407 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1456
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542186|ref|NP_001188630.1| paralytic, isoform AI [Drosophila melanogaster]
gi|318069420|gb|ADV37712.1| paralytic, isoform AI [Drosophila melanogaster]
Length = 2086
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1245 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1304
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1305 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1360
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1361 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1410
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|320542160|ref|NP_001188617.1| paralytic, isoform V [Drosophila melanogaster]
gi|318069407|gb|ADV37699.1| paralytic, isoform V [Drosophila melanogaster]
Length = 2097
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1256 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1315
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1316 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1371
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1372 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1421
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 766 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 820
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 821 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 876
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 877 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 933
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 934 AVMGMQ 939
>gi|320542176|ref|NP_001188625.1| paralytic, isoform AD [Drosophila melanogaster]
gi|318069415|gb|ADV37707.1| paralytic, isoform AD [Drosophila melanogaster]
Length = 2086
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1245 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1304
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + D+ ++RT R LR
Sbjct: 1305 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1360
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1361 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1410
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|403444|gb|AAB59192.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2077
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 42 FSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFESAVKVMARGFILE 92
F +IT IL + + + + P P ++ + IFT I+ E +K +A GF +
Sbjct: 1249 FETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV- 1307
Query: 93 SFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKT 146
YL +AW WLDF+++ ++ +V + G + A +RT R LR L+ ++ + G++
Sbjct: 1308 ---YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRV 1364
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1365 VVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1401
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-LAYVT 115
++S FT + E+ +K+MA + Y ++ WN DFI++A
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 116 MGIDLGNLAALRTFRV 131
+ L+ LR+FR+
Sbjct: 898 GLEGVQGLSVLRSFRL 913
>gi|194893768|ref|XP_001977935.1| GG19319 [Drosophila erecta]
gi|190649584|gb|EDV46862.1| GG19319 [Drosophila erecta]
Length = 2130
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1405
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|320542228|ref|NP_001188651.1| paralytic, isoform BD [Drosophila melanogaster]
gi|318069441|gb|ADV37733.1| paralytic, isoform BD [Drosophila melanogaster]
Length = 2056
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542216|ref|NP_001188645.1| paralytic, isoform AX [Drosophila melanogaster]
gi|318069435|gb|ADV37727.1| paralytic, isoform AX [Drosophila melanogaster]
Length = 2099
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1258 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1317
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1318 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1373
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1374 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1423
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 768 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 822
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 823 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 878
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 879 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 935
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 936 AVMGMQ 941
>gi|320542214|ref|NP_001188644.1| paralytic, isoform AW [Drosophila melanogaster]
gi|318069434|gb|ADV37726.1| paralytic, isoform AW [Drosophila melanogaster]
Length = 2062
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1221 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1280
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1281 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1336
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1337 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 731 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 785
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 786 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 841
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 842 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 898
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 899 AVMGMQ 904
>gi|320542184|ref|NP_001188629.1| paralytic, isoform AH [Drosophila melanogaster]
gi|318069419|gb|ADV37711.1| paralytic, isoform AH [Drosophila melanogaster]
Length = 2107
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1266 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1325
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1326 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1381
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1382 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1431
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 944 AVMGMQ 949
>gi|320542200|ref|NP_001188637.1| paralytic, isoform AP [Drosophila melanogaster]
gi|318069427|gb|ADV37719.1| paralytic, isoform AP [Drosophila melanogaster]
Length = 2097
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1256 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1315
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + D+ ++RT R LR
Sbjct: 1316 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1371
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1372 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1421
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 766 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 820
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 821 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 876
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 877 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 933
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 934 AVMGMQ 939
>gi|320542220|ref|NP_001188647.1| paralytic, isoform AZ [Drosophila melanogaster]
gi|318069437|gb|ADV37729.1| paralytic, isoform AZ [Drosophila melanogaster]
Length = 2111
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1270 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1329
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + D+ ++RT R LR
Sbjct: 1330 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1385
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1386 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1435
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 755 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 809
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 810 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 865
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 866 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 922
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 923 AVMGMQ 928
>gi|403447|gb|AAB59195.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2131
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 42 FSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFESAVKVMARGFILE 92
F +IT IL + + + + P P ++ + IFT I+ E +K +A GF +
Sbjct: 1303 FETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV- 1361
Query: 93 SFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKT 146
YL +AW WLDF+++ ++ +V + G + A +RT R LR L+ ++ + G++
Sbjct: 1362 ---YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRV 1418
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1419 VVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|116007170|ref|NP_001036280.1| paralytic, isoform B [Drosophila melanogaster]
gi|113193612|gb|ABI30985.1| paralytic, isoform B [Drosophila melanogaster]
Length = 2131
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + D+ ++RT R LR
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1405
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|401728825|gb|AFQ00696.1| sodium channel [Culex quinquefasciatus]
Length = 2082
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 173 STPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRA KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 233 GNLAALRTFRVLRAPKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 290
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1292 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1347
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1348 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1407
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1408 WLIFAMMGVQLFAGK 1422
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 748 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITPCIVVNTLFMALDHHDMNPDMERALK 804
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 805 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 860
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 861 LRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IFAVMGMQ 913
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1623 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLSDLIEKYFV 1675
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1676 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1734
>gi|403446|gb|AAB59194.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2121
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 42 FSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFESAVKVMARGFILE 92
F +IT IL + + + + P P ++ + IFT I+ E +K +A GF +
Sbjct: 1293 FETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV- 1351
Query: 93 SFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKT 146
YL +AW WLDF+++ ++ +V + G + A +RT R LR L+ ++ + G++
Sbjct: 1352 ---YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRV 1408
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1409 VVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1445
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|442616616|ref|NP_001259619.1| paralytic, isoform BF [Drosophila melanogaster]
gi|440216848|gb|AGB95461.1| paralytic, isoform BF [Drosophila melanogaster]
Length = 2145
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1405
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|403443|gb|AAB59191.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2123
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 42 FSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFESAVKVMARGFILE 92
F +IT IL + + + + P P ++ + IFT I+ E +K +A GF +
Sbjct: 1295 FETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV- 1353
Query: 93 SFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKT 146
YL +AW WLDF+++ ++ +V + G + A +RT R LR L+ ++ + G++
Sbjct: 1354 ---YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRV 1410
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1411 VVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1447
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 779 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 833
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 834 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 889
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 890 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 946
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 947 AVMGMQ 952
>gi|403442|gb|AAB59190.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2110
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 42 FSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFESAVKVMARGFILE 92
F +IT IL + + + + P P ++ + IFT I+ E +K +A GF +
Sbjct: 1282 FETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV- 1340
Query: 93 SFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKT 146
YL +AW WLDF+++ ++ +V + G + A +RT R LR L+ ++ + G++
Sbjct: 1341 ---YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRV 1397
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1398 VVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1434
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 766 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 820
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 821 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 876
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 877 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 933
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 934 AVMGMQ 939
>gi|221329977|ref|NP_001138205.1| paralytic, isoform D [Drosophila melanogaster]
gi|220901794|gb|ACL82937.1| paralytic, isoform D [Drosophila melanogaster]
Length = 2114
Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1273 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1332
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ L+ + + D+ ++RT R LR
Sbjct: 1333 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1388
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ V+ G+K +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1389 PLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1438
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 768 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 822
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 823 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 878
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 879 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IF 935
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 936 AVMGMQ 941
>gi|403445|gb|AAB59193.1| sodium channel alpha subunit [Drosophila melanogaster]
Length = 2118
Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 88/157 (56%), Gaps = 19/157 (12%)
Query: 42 FSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFESAVKVMARGFILE 92
F +IT IL + + + + P P ++ + IFT I+ E +K +A GF +
Sbjct: 1290 FETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKV- 1348
Query: 93 SFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKT 146
YL +AW WLDF+++ ++ +V + G + A +RT R LR L+ ++ + G++
Sbjct: 1349 ---YLTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRV 1405
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 VVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1442
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>gi|195479236|ref|XP_002100817.1| GE15966 [Drosophila yakuba]
gi|194188341|gb|EDX01925.1| GE15966 [Drosophila yakuba]
Length = 1885
Score = 335 bits (859), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQDSRGKKSDESHDK 191
A+MG+Q GK + D+
Sbjct: 955 AVMGMQ-LFGKNYHDHKDR 972
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 60/211 (28%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1280 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1339
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------------------------ 115
+K +A GF + Y +AW WLDF+++ L+ +
Sbjct: 1340 MLIKWLALGFKV----YFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSMRTLRALR 1395
Query: 116 ----------MGIDLGNLAA-------------LRTFRVLRALKTVAIVPGLKTIVGAVI 152
M + L N A +RT R LR L+ ++ + G++ +V A++
Sbjct: 1396 PLRAVSRWEGMKVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALV 1455
Query: 153 ESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1456 QAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1486
>gi|414091063|gb|AFW98419.1| sodium channel Na-Lv5 [Culex quinquefasciatus]
Length = 2095
Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTI NCILMIMP
Sbjct: 102 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTIRGNCILMIMP 161
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 162 PTPTVESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDL 221
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 222 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 279
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1305 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1360
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ +
Sbjct: 1361 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIF 1420
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1421 WLIFAIMGVQLFAGK 1435
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D WV F + +I+ P LFI I+ N + M + P +E
Sbjct: 782 FCVWDCCWVWLKF---QEWVSFIVFDPFVELFITLCIVVNTLFMALDHHDMNPDMERALK 838
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 839 SGNYFFTATFAIEATMKLIA----MSPKWYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 894
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 895 LRSFRLLRVFKLAKSWPTLNLPISIMGRTVGALGNLTSVLCIIIF---IFAVMGMQ 947
Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I++ E +K+ A + Y + WN DF+V+ L+ +G+ L +
Sbjct: 1636 MIFICIFSSECLMKIFAL-----RYHYFIEPWNLFDFVVVILS--ILGLVLRDLIEKYFV 1688
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1689 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1747
>gi|195351464|ref|XP_002042254.1| GM13396 [Drosophila sechellia]
gi|194124097|gb|EDW46140.1| GM13396 [Drosophila sechellia]
Length = 1674
Score = 335 bits (858), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 163 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 222
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 223 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 280
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1279 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1338
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1339 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1394
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1395 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1444
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 776 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 830
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 831 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 886
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 887 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 943
Query: 173 ALMGLQDSRGKKSDESHDK 191
A+MG+Q GK + D+
Sbjct: 944 AVMGMQ-LFGKNYHDHKDR 961
>gi|322795001|gb|EFZ17857.1| hypothetical protein SINV_07049 [Solenopsis invicta]
Length = 1892
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/178 (93%), Positives = 172/178 (96%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDI+RFSATDA+W+LDPFNPIRRVAIYILVH FSLFIITTIL NCILMIMP
Sbjct: 127 TFVVISKGKDIYRFSATDAMWMLDPFNPIRRVAIYILVHQFFSLFIITTILVNCILMIMP 186
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VI LAYVTMGIDL
Sbjct: 187 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVITLAYVTMGIDL 246
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 247 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP--- 63
+G DIF D W+ F ++ ++ P LFI I+ N + M +
Sbjct: 790 RGIDIF--CVWDCCWLWLEF---QKYVSLLVFDPFVELFITLCIVVNTLFMALDHHDMDK 844
Query: 64 ----TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +G++
Sbjct: 845 DMERVLKSGNYFFTATFGIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLELGLE 900
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+M
Sbjct: 901 GVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVM 957
Query: 176 GLQ 178
G+Q
Sbjct: 958 GMQ 960
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG------IDLGNLA 124
IFT I+ E +K +A GF Y +AW WLDFI++ L+ + +G D+
Sbjct: 1281 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMLSLINLGAIWAGAADIPAFR 1336
Query: 125 ALRTFRVLRALKTVAIVPGLK 145
++RT R LR L+ V+ G++
Sbjct: 1337 SMRTLRALRPLRAVSRWEGMR 1357
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------- 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1490 MIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYFV 1542
Query: 123 ----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1543 SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1601
>gi|328712094|ref|XP_003244729.1| PREDICTED: sodium channel protein para-like isoform 2
[Acyrthosiphon pisum]
Length = 1149
Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/178 (91%), Positives = 171/178 (96%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATD LW LDPFNPIRRVAIYILVHP+FS+ IITTILTNC+ MIMP
Sbjct: 104 TFVVISKGKDIFRFSATDGLWALDPFNPIRRVAIYILVHPIFSVTIITTILTNCVFMIMP 163
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIE++EVIFTGIYTFESAVKVMARGFILE FTYLRDAWNWLDFIVIALAYVTMGI+L
Sbjct: 164 PTPTIEASEVIFTGIYTFESAVKVMARGFILEHFTYLRDAWNWLDFIVIALAYVTMGIEL 223
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLA LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILT+FSLSVFAL+GLQ
Sbjct: 224 GNLAVLRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTIFSLSVFALLGLQ 281
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D W P+ ++ +I+ P L+I I+ N + M + P ++
Sbjct: 765 FCVWDCGW---PWLKFQQGLAFIVFDPFVELYITLCIVVNTLFMALDHHEMDPKLDFVLN 821
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAA 125
V F+ + E+A+K+MA + Y + WN DFI++ L+ V + L+
Sbjct: 822 KANVFFSATFGVEAALKLMA----MSPKYYFQMGWNIFDFIIVILSVVELLSAGYQGLSV 877
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G I ++ NL V+ + +F +FA+MG+Q
Sbjct: 878 LRSFRLLRVFKLAKSWPTLNLLISIMGRTIGALGNLTFVLCIIIF---IFAVMGMQ 930
>gi|315001924|emb|CBI71141.1| voltage gated sodium channel subunit 1 [Myzus persicae]
Length = 1149
Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/178 (91%), Positives = 171/178 (96%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATD LW LDPFNPIRRVAIYILVHP+FS+ IITTILTNC+ MIMP
Sbjct: 104 TFVVISKGKDIFRFSATDGLWALDPFNPIRRVAIYILVHPIFSVTIITTILTNCVFMIMP 163
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIE++EVIFTGIYTFESAVKVMARGFILE FTYLRDAWNWLDFIVIALAYVTMGI+L
Sbjct: 164 PTPTIEASEVIFTGIYTFESAVKVMARGFILEHFTYLRDAWNWLDFIVIALAYVTMGIEL 223
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLA LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILT+FSLSVFAL+GLQ
Sbjct: 224 GNLAVLRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTIFSLSVFALLGLQ 281
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D W P+ ++ +I+ P L+I I+ N + M + P ++
Sbjct: 765 FCVWDCGW---PWLKFQQGLAFIVFDPFVELYITLCIVVNTLFMALDHHEMDPKLDFILN 821
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAA 125
V F+ + E+A+K+MA + Y + WN DFI++ L+ V + L+
Sbjct: 822 KANVFFSATFGVEAALKLMA----MSPKYYFQMGWNIFDFIIVILSVVELLSAGYQGLSV 877
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G I ++ NL V+ + +F +FA+MG+Q
Sbjct: 878 LRSFRLLRVFKLAKSWPTLNLLISIMGRTIGALGNLTFVLCIIIF---IFAVMGMQ 930
>gi|328712092|ref|XP_003244728.1| PREDICTED: sodium channel protein para-like isoform 1
[Acyrthosiphon pisum]
Length = 1160
Score = 328 bits (841), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 162/178 (91%), Positives = 171/178 (96%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATD LW LDPFNPIRRVAIYILVHP+FS+ IITTILTNC+ MIMP
Sbjct: 115 TFVVISKGKDIFRFSATDGLWALDPFNPIRRVAIYILVHPIFSVTIITTILTNCVFMIMP 174
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPTIE++EVIFTGIYTFESAVKVMARGFILE FTYLRDAWNWLDFIVIALAYVTMGI+L
Sbjct: 175 PTPTIEASEVIFTGIYTFESAVKVMARGFILEHFTYLRDAWNWLDFIVIALAYVTMGIEL 234
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLA LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILT+FSLSVFAL+GLQ
Sbjct: 235 GNLAVLRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTIFSLSVFALLGLQ 292
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE---- 66
F D W P+ ++ +I+ P L+I I+ N + M + P ++
Sbjct: 776 FCVWDCGW---PWLKFQQGLAFIVFDPFVELYITLCIVVNTLFMALDHHEMDPKLDFVLN 832
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAA 125
V F+ + E+A+K+MA + Y + WN DFI++ L+ V + L+
Sbjct: 833 KANVFFSATFGVEAALKLMA----MSPKYYFQMGWNIFDFIIVILSVVELLSAGYQGLSV 888
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G I ++ NL V+ + +F +FA+MG+Q
Sbjct: 889 LRSFRLLRVFKLAKSWPTLNLLISIMGRTIGALGNLTFVLCIIIF---IFAVMGMQ 941
>gi|321470417|gb|EFX81393.1| hypothetical protein DAPPUDRAFT_50150 [Daphnia pulex]
Length = 2057
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/178 (90%), Positives = 169/178 (94%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+L PFNPIRRVAIY+LVHPLFS FII TILTNCILMIMP
Sbjct: 53 TFVVISKGKDIFRFSATDAMWLLSPFNPIRRVAIYVLVHPLFSFFIILTILTNCILMIMP 112
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
IESTEVIFT IYTFESAVKVMARGFIL+ FTYLRDAWNWLDFIVIALAYVTMGIDL
Sbjct: 113 PNAFIESTEVIFTSIYTFESAVKVMARGFILKPFTYLRDAWNWLDFIVIALAYVTMGIDL 172
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAI+PGLKTIVGAVIESVKNLRDVIILT+FSLSVFAL+GLQ
Sbjct: 173 GNLAALRTFRVLRALKTVAIIPGLKTIVGAVIESVKNLRDVIILTLFSLSVFALLGLQ 230
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFT I+ E +K +A GF Y +AW WLDFI++ ++ V G +
Sbjct: 1307 IFTVIFFIEMLIKWLALGFK----NYFTNAWCWLDFIIVMVSLVNYVASLFGGGKIQAFK 1362
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ +A G++ +V A+I+++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1363 TMRTLRALRPLRALARFQGMRVVVNALIQAIPSIFNVLLVCLILWLIFAIMGVQMFAGK 1421
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLF-SLFIITTILTNCILMIMPGTPTIEST-------EV 70
+W P+ + I + V+ F LFI I+ N + M + E
Sbjct: 745 CVWDCSPYWVSFQRLISLFVYDAFIELFITLCIVVNTLFMALDHHGMNEEMSRALKMGNY 804
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI-ALAYVTMGIDLGNLAALRTF 129
FT + E+ K++A I F Y R+ WN DFI++ + L+ LR+F
Sbjct: 805 FFTATFAIEATFKLIA---ISPKF-YFREGWNIFDFIIVFLSLLELGLEGVSGLSVLRSF 860
Query: 130 RVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 861 RLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTFVLCIIIF---IFAVMGMQ 909
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 44 LFIITTILTNCILMIMPG---TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDA 100
LFI +LT + P + ++ + F I+T E ++KV F L + Y ++
Sbjct: 1596 LFIGLNMLTMTLDQYKPAQILSNILDYLNMFFIVIFTAECSLKV----FALRHY-YFKEP 1650
Query: 101 WNWLDFIVIALAYVTMGI-DLGN--------LAALRTFRVLRALKTVAIVPGLKTIVGAV 151
WN DF+V+ L+ + M + DL L +R +V R L+ V G++T++ A+
Sbjct: 1651 WNLFDFVVVILSILGMVLSDLIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFAL 1710
Query: 152 IESVKNLRDVIILTMFSLSVFALMGL 177
S+ L ++ +L + ++A+ G+
Sbjct: 1711 AMSLPALFNICLLLFLVMFIYAIFGM 1736
>gi|242013090|ref|XP_002427248.1| sodium channel protein type 4 subunit alpha, putative [Pediculus
humanus corporis]
gi|212511581|gb|EEB14510.1| sodium channel protein type 4 subunit alpha, putative [Pediculus
humanus corporis]
Length = 1812
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 159/168 (94%), Positives = 165/168 (98%)
Query: 11 IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV 70
IFRFSAT+A+W+LDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP TP +ESTEV
Sbjct: 52 IFRFSATNAMWILDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPTTPAVESTEV 111
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFR 130
IFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDFIVI+LAYVTMGIDLGNLAALRTFR
Sbjct: 112 IFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFIVISLAYVTMGIDLGNLAALRTFR 171
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 172 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 219
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIE 66
F D W F VA+ + P LFI I+ N + M + ++
Sbjct: 708 FCVWDCCWAWLKFQEF--VALLVF-DPFVELFITLCIVVNTLFMALDHHDMDKDMDRALK 764
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
S FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 765 SGNYFFTATFAIEATLKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLENVQGLSV 820
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 821 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 873
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA---LR 127
G + E +K +A GF Y +AW WLDF+++ ++ + L G + A +R
Sbjct: 1237 GYFFIEMLIKWLALGFK----EYFTNAWCWLDFVIVMVSLINFVASLCGAGGIQAFKTMR 1292
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
T R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1293 TLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1348
>gi|246372819|gb|ABL10360.2| voltage-gated sodium channel [Cancer borealis]
Length = 1989
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 151/178 (84%), Positives = 166/178 (93%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T VV+SKG+DIFRFSATDA+W+L PFNP+RR A++IL+HPLF+ FII TIL NC+LMIMP
Sbjct: 32 TTVVISKGRDIFRFSATDAMWILSPFNPVRRTAMFILIHPLFNFFIICTILANCVLMIMP 91
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TIES+EV+FT IYTFES VKVMARGFILESFTYLRDAWNWLDF VI+LAYVTMGIDL
Sbjct: 92 TNETIESSEVLFTAIYTFESGVKVMARGFILESFTYLRDAWNWLDFTVISLAYVTMGIDL 151
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILT+FSLSVFAL+GLQ
Sbjct: 152 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTVFSLSVFALLGLQ 209
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFES 80
R+ Y L+ + F +IT IL + + + + G P ++ + IFT I+ E
Sbjct: 1223 RLKTYQLIENKYFETAVITMILLSSLALAAEDVNLKGRPALQDILYYMDRIFTVIFFIEM 1282
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLRA 134
+K +A GF Y +AW WLDF+++ ++ + + G + +RT R LR
Sbjct: 1283 LIKWVALGFS----KYFTNAWCWLDFLIVMVSLINLVATLAGGGKIQAFKTMRTLRALRP 1338
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A++ ++ ++ +V+++ + +FA+MG+Q G+
Sbjct: 1339 LRALSRMQGMRVVVNALVGAIPSIVNVLLVCLIFWLIFAIMGVQLFNGR 1387
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYTF 78
+N ++ ++ P LFI I+ N + M M ++ FT ++
Sbjct: 733 WNKFAKLVELLVFDPFVELFITLCIVVNTLFMAMDHYGMNCSFDHFLKMGNYFFTATFSI 792
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKT 137
E +K++A + YL++ WN DFI++ L+ + +G+ ++ L+ LR+FR+LR K
Sbjct: 793 ECFLKIIA----MSPKYYLQEGWNIFDFIIVFLSLLELGLANVSGLSVLRSFRLLRVFKL 848
Query: 138 VAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 849 AKSWPTLNLLISIMGKTVGALGNLTFVLCIIIF---IFAVMGMQ 889
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTF 78
F P + V I+ F + I+ I N + M M E+ ++ IF I+T
Sbjct: 1538 FRP-QAVVFEIVTSKKFDMIIMIFIGMNMLTMTMDHYQMTETWKMGLNYLNLIFICIFTS 1596
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-----------LAALR 127
E +KV A + Y ++ WN DF+V+ ++ +G+ L + L +R
Sbjct: 1597 ECVLKVFAL-----RWHYFKEPWNLYDFVVVIMS--ILGMVLKDIIEKYFVSPTLLRVVR 1649
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+V R L+ V G++T++ A+ S+ L ++ +L + + A+ G+
Sbjct: 1650 VAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMYISAIYGM 1699
>gi|111792863|gb|ABH12275.1| putative voltage-gated sodium channel [Haplopelma schmidti]
Length = 1987
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/178 (79%), Positives = 160/178 (89%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKGKDIFRFSAT+++W+L PFNP+RRVAIY+LVHP FS +I TIL NC+LM +P
Sbjct: 106 TFMVISKGKDIFRFSATNSVWLLSPFNPVRRVAIYVLVHPAFSFLVIVTILVNCVLMTLP 165
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
IE +E IFT IYT ES +KV+ARGFILE FTYLRD WNWLDFIVIALAYVTMG+DL
Sbjct: 166 PNDNIEKSETIFTSIYTIESCIKVIARGFILEKFTYLRDPWNWLDFIVIALAYVTMGVDL 225
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL+ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNL+DVIILT+FSLSVFAL+GLQ
Sbjct: 226 GNLSALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLKDVIILTLFSLSVFALLGLQ 283
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPT----IE 66
F D W F I ++ I+ P LFI I+ N + M M P+ +E
Sbjct: 731 FCVWDCCWCWLRFQEIIKL---IVFDPFMELFITLCIIVNTLFMAMDHHDMAPSFQKFLE 787
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+++K+++ L +Y ++ WN DFI++ L+ + +G+D + L+
Sbjct: 788 YGNYFFTATFAIEASLKLLS----LSPKSYFQEGWNIFDFIIVVLSLLELGLDGVSGLSV 843
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 844 LRSFRLLRVFKLAKSWPTLNLLISIMGKTMGALGNLTFVLGIIIF---IFAVMGMQ 896
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI----------FTGIYTFE 79
R A ++ H F IIT ILT+ + + I FT ++ FE
Sbjct: 1229 RGKAFRLVEHKYFETLIITMILTSSLALAAEDVHHKNRPWYIKEALVMMDKAFTVLFLFE 1288
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA---LRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V + L GN+ A +RT R LR
Sbjct: 1289 MLLKWLAFGFR----KYFTNAWCWLDFVIVLVSVVNLVASLLGAGNIQAFKTMRTLRALR 1344
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V +++++ + +V+++ + +FA+MG+ GK
Sbjct: 1345 PLRALSRFQGMRVVVNVLVQAIPAIFNVLLVCLIFWLIFAIMGVNMFAGK 1394
>gi|30142161|gb|AAP13992.1| sodium channel protein [Varroa destructor]
Length = 2215
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/178 (81%), Positives = 158/178 (88%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKGKDIFRFS+T+ALW+L PFNPIRR+AI ILVHPLFS FII IL NC+LM MP
Sbjct: 151 TFMVISKGKDIFRFSSTNALWILSPFNPIRRLAICILVHPLFSFFIIVAILVNCVLMTMP 210
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
IE TE IFT IYTFES +K++ARGFILE FTYL D WNWLDFIVI LAYVTM ++L
Sbjct: 211 ANGKIEQTETIFTTIYTFESFIKILARGFILERFTYLGDPWNWLDFIVITLAYVTMFVNL 270
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL+ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 271 GNLSALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 328
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 18/154 (11%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARG 88
I+ P LFI I+ N + M M + S FT + E+ +K+MA+
Sbjct: 876 IVFDPFMELFITLCIVVNTLFMAMDHHDMDRDFENVLRSGNYFFTATFAIEATMKLMAKS 935
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAIVPGLK-- 145
Y ++ WN DFI++AL+ + +G++ + L+ LR+FR+LR K P L
Sbjct: 936 ----PKNYFKEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 991
Query: 146 -TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+I+G I ++ NL V+ + +F +FA+MG+Q
Sbjct: 992 ISIMGKTIGALGNLTFVLGIIIF---IFAVMGMQ 1022
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAA--- 125
FT I+ E +K +A GF Y +AW WLDF+++ ++ + + + G + A
Sbjct: 1504 FTVIFFSEMLLKWLAFGFQ----KYFTNAWCWLDFVIVLVSVINLVATWLGAGKIQAFKT 1559
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+RT R LR L+ ++ G++ +V A+++++ + +V+++ + +F++MG+Q
Sbjct: 1560 MRTLRALRPLRALSRFQGMRVVVNALVQAIPAIFNVLLVCLVFWLIFSIMGVQ 1612
>gi|241153636|ref|XP_002407119.1| skeletal muscle sodium channel alpha subunit, putative [Ixodes
scapularis]
gi|215494036|gb|EEC03677.1| skeletal muscle sodium channel alpha subunit, putative [Ixodes
scapularis]
Length = 2026
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/178 (80%), Positives = 158/178 (88%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSK KDIFRFS+T AL++L PFNP+RR+AI ILVHPLFS F+I TIL NC+LM MP
Sbjct: 104 TFVVVSKSKDIFRFSSTKALFLLSPFNPVRRLAICILVHPLFSFFVIVTILVNCVLMTMP 163
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
IE TE IFT IYTFES K+MARGFILE FTYLRD WNWLDF+VI+LAYVTM ++L
Sbjct: 164 SNEKIEQTETIFTTIYTFESFTKMMARGFILEPFTYLRDPWNWLDFVVISLAYVTMFVNL 223
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL+ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL+GLQ
Sbjct: 224 GNLSALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALLGLQ 281
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 19/174 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIESTEVIFTGIYTFESA 81
I+ + I+ P LFI I+ N + M M ++ FT + E+A
Sbjct: 764 IQEILGLIVFDPFMELFITLCIVVNTLFMAMDHHDMDKDFDNVLKKGNYFFTATFAIEAA 823
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
+K+MA + Y R+ WN DF+++AL+ + +G++ + L+ LR+FR+LR K
Sbjct: 824 MKLMA----MSPKNYFREGWNIFDFLIVALSLIELGLENVQGLSVLRSFRLLRVFKLAKS 879
Query: 141 VPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHDK 191
P L +I+G I ++ NL V+ + +F +FA+MG+Q GK +E+ K
Sbjct: 880 WPTLNLLISIMGKTIGALGNLTFVLGIIIF---IFAVMGMQ-LFGKNYEENKHK 929
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 29 IRRVAIYILV-HPLFSLFIITTILTNCILMIMPGT-----PTIEST----EVIFTGIYTF 78
I R +Y LV + F ++ ILT+ + + + P +++ + FT I+ F
Sbjct: 1262 IVRTKVYALVENKYFETVVVILILTSSLALALEDVNLKDRPLLKAVLTYMDKTFTVIFFF 1321
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAA---LRTFRVL 132
E +K +A GF Y +AW WLDF+++ ++ + + G + A +RT R L
Sbjct: 1322 EMLLKWVAFGFK----KYFTNAWCWLDFVIVLVSVINLVATAFGAGRIQAFKTMRTLRAL 1377
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
R L+ ++ G++ +V A+++++ + +V+++ + +F++MG+Q GK
Sbjct: 1378 RPLRALSRFQGMRVVVNALVQAIPAIFNVLLVCLIFWLIFSIMGVQMLAGK 1428
>gi|56130944|gb|AAQ84279.2| voltage-gated sodium channel protein [Mesobuthus martensii]
Length = 1871
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 153/178 (85%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKGKDIFRFSAT+A+W+LDPFNPIRR AI ILVHP FS +I TIL NC+LM
Sbjct: 101 TFIVISKGKDIFRFSATNAMWILDPFNPIRRAAISILVHPAFSFLVIVTILVNCVLMTQT 160
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
+ E +FT IYT ES +K ARGFILE FTYLRD WNWLDF+VI+LAY+TMG++L
Sbjct: 161 NVTHEKELERLFTAIYTIESCIKATARGFILEQFTYLRDPWNWLDFVVISLAYITMGVEL 220
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL+ALRTFRVLRALKTVA++PGLKTIVGAVIESVKNL+DVIILT+FSLS+FAL+GLQ
Sbjct: 221 GNLSALRTFRVLRALKTVAVIPGLKTIVGAVIESVKNLKDVIILTVFSLSLFALLGLQ 278
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
++ + IFT ++ FE +K +A GF Y +AW WLDF+++ ++ + G
Sbjct: 1158 LQYMDKIFTILFFFEMLIKWLAFGFK----KYFTNAWCWLDFVIVLVSLFNLAVSLMGGS 1213
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
D+ +RT R LR L+ ++ + G++ +V A+++++ + +V+++ + +F++MG+Q
Sbjct: 1214 DISAFKTMRTLRALRPLRAMSRLEGMRVVVNALVQAIPAIFNVLLVCLIFWLIFSIMGVQ 1273
Query: 179 DSRGK 183
GK
Sbjct: 1274 LFAGK 1278
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-TEVIFTGIYTFES--AVKVM 85
I+++ I+ P LFI I+ N + M + +S E + G Y F + A++ +
Sbjct: 593 IQKIVNIIVFDPFMELFITLAIIVNTLFMSIEHADMDKSLQEFLKNGNYFFTATFAIEAV 652
Query: 86 ARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRALKTVAIVP 142
+ L Y ++ WN DF+++ L+ V + + L L+ LR+FR+LR K P
Sbjct: 653 MKLVALSPKYYFKEGWNIFDFLIVVLSLVELCGENVSLPGLSVLRSFRLLRVFKLAKSWP 712
Query: 143 GLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 713 TLNLLISIMGKTVGALGNLTFVLGIIIF---IFAVMGMQ 748
>gi|391334696|ref|XP_003741737.1| PREDICTED: sodium channel protein para-like [Metaseiulus
occidentalis]
Length = 2111
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKGKDIFRFS+T++ W+L PFNP+RR+AI ILVH LF+ II ILTNCILM
Sbjct: 149 TFMVISKGKDIFRFSSTNSFWLLSPFNPVRRLAICILVHQLFNFTIICAILTNCILMTQA 208
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
T E TE IFT IYTFES +K++ARGFILE FTYLRD WNWLDFIVI LAYVTM ++L
Sbjct: 209 SDGT-EQTEAIFTTIYTFESIIKILARGFILERFTYLRDPWNWLDFIVITLAYVTMFVNL 267
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL+ALRTFRVLRALKTVAIVPGLKTIVGA+IESVKNLRDVIILTMFSLSVFAL+GLQ
Sbjct: 268 GNLSALRTFRVLRALKTVAIVPGLKTIVGALIESVKNLRDVIILTMFSLSVFALLGLQ 325
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARG 88
I+ P LFI I+ N + M M + S FT + E+++K+MA+
Sbjct: 831 IVFDPFMELFITLCIVVNTLFMAMDHHDMDRDFENVLRSGNYFFTATFAIEASMKLMAKS 890
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAIVPGLK-- 145
Y ++ WN DFI++AL+ + +G++ + L+ LR+FR+LR K P L
Sbjct: 891 ----PKNYFKEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLL 946
Query: 146 -TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+I+G I ++ NL V+ + +F +FA+MG+Q
Sbjct: 947 ISIMGKTIGALGNLTFVLAIIIF---IFAVMGMQ 977
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 68/118 (57%), Gaps = 10/118 (8%)
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAA--- 125
FT I+ FE +K +A G Y +AW WLDF+++ ++ + + + G + A
Sbjct: 1400 FTVIFFFEMLLKWLAFGLQ----KYFTNAWCWLDFVIVFVSVINLVATWLGAGKIQAFKT 1455
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ G++ +V A+++++ + +V+++ + +F++MG+Q GK
Sbjct: 1456 MRTLRALRPLRALSRFQGMRVVVNALVQAIPAIFNVLLVCLIFWLIFSIMGVQMFAGK 1513
>gi|404428523|gb|AFR68409.1| voltage-gated sensitive sodium channel [Tetranychus cinnabarinus]
Length = 2193
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 154/179 (86%), Gaps = 2/179 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT AL++L PFNPIRRVAI++LVHP FS +I TIL NCILM M
Sbjct: 103 TFVVVSKGKDIFRFSATKALFILSPFNPIRRVAIFMLVHPWFSFLVIVTILVNCILMTMQ 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-D 119
+ IE TE+IFT IYTFES +KV ARG IL +FTYLRD WNWLDF+VIALAY+TM D
Sbjct: 163 SS-EIERTEIIFTTIYTFESCLKVTARGLILTNFTYLRDPWNWLDFVVIALAYLTMLFED 221
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKTVA+VPGLKTIVGA+IE+ KNL+DV ILT FSLSVFAL+GLQ
Sbjct: 222 LGNLSALRTFRVLRALKTVAVVPGLKTIVGALIEAAKNLKDVTILTCFSLSVFALLGLQ 280
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTIEST----E 69
A W+ + +R ++ F +IT IL + + + + P +E + +
Sbjct: 1417 AFWI--KWREVRSKCYKLVEDKYFETLVITLILISSMTLALEDVNLKERPWLEYSSKYID 1474
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---- 125
FT I+T E +K A GF +Y +AW WLDFI++ ++ + +G + LA
Sbjct: 1475 QFFTIIFTCEMLLKWFAYGFK----SYFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAF 1530
Query: 126 --LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R R L+ ++ G++ +V A+I+++ + +V+++ + +FA+MG+Q GK
Sbjct: 1531 KTMRTLRAFRPLRAMSRSKGMRVVVNALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGK 1590
Query: 184 KS 185
S
Sbjct: 1591 FS 1592
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESA 81
I+ + I+ P LFI I+ N + M M P E+ + F+ + E+
Sbjct: 779 IQELFALIVFDPFMELFITLCIVVNTLFMAMDHHDMDPDFENVLKTGNLFFSATFAIEAF 838
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
+K++A I F Y R+ WN DFI++AL+ + + ++ + L+ LR+FR+LR K
Sbjct: 839 MKLIA---ISPKF-YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKS 894
Query: 141 VPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L TI+G + + NL V+ + +F +FA+MG+Q
Sbjct: 895 WPTLNLLITIMGKTLGDLGNLTFVLAIIVF---IFAVMGMQ 932
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LGN 122
+E + F ++T E +K+ A F Y R+ WN DF+++ L+ + + + N
Sbjct: 1789 LEMCNLFFIAVFTAECMLKIFAL-----RFHYFREPWNVFDFVIVILSIASSALKDFVEN 1843
Query: 123 -------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L +R ++ R L+ V G++T++ A+ S+ L ++ +L + ++A+
Sbjct: 1844 YLISPTLLRVVRVVKIGRVLRLVKGARGIRTLLFALAMSLPALFNICLLLFLVMFIYAIF 1903
Query: 176 GL 177
G+
Sbjct: 1904 GM 1905
>gi|363736035|ref|XP_003641652.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Gallus gallus]
Length = 1994
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 718 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 777
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 778 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 833
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 834 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 889
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>gi|363736039|ref|XP_003641654.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
5 [Gallus gallus]
Length = 1968
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 692 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 751
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 752 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 807
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 863
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1161 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1220
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1221 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1276
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1277 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1326
>gi|363736037|ref|XP_003641653.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Gallus gallus]
Length = 2022
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 746 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 805
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 806 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 861
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 862 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 917
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1215 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1274
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1275 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1330
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1331 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1380
>gi|363736031|ref|XP_003641650.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Gallus gallus]
Length = 2011
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 735 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 794
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 795 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 850
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 851 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 906
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1204 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1264 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1319
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1320 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1369
>gi|224054924|ref|XP_002197542.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Taeniopygia guttata]
Length = 2011
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 735 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 794
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 795 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 850
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 851 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 906
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1204 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1264 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1319
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1320 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1369
>gi|334330180|ref|XP_003341312.1| PREDICTED: sodium channel protein type 2 subunit alpha [Monodelphis
domestica]
Length = 1957
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YKFANTCLIWDCCEPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLYVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV LR ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALRKPDLVLAIIVFIFAVVGMQ 853
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|126326265|ref|XP_001367245.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Monodelphis domestica]
Length = 2007
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 732 YKFANTCLIWDCCEPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 792 VLYVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV LR ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALRKPDLVLAIIVFIFAVVGMQ 903
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1199 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1258
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1259 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1314
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>gi|327277930|ref|XP_003223716.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Anolis
carolinensis]
Length = 2002
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ + I++ P L I I+ N + M M P
Sbjct: 727 YRFANTYLIWDCWRPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTHYFNH 786
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 787 VLLVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 RKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEM 1255
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 LLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRP 1311
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|301619887|ref|XP_002939317.1| PREDICTED: sodium channel protein type 2 subunit alpha [Xenopus
(Silurana) tropicalis]
Length = 1937
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+RR++I ILVH LFS+ I+ TILTNC M M
Sbjct: 91 TFIVLNRGKAIFRFSATSALYILTPFNPLRRISIKILVHSLFSMLIMCTILTNCFFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF LESFT+LRD WNWLDF VI +AYVT +D
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLVKILARGFCLESFTFLRDPWNWLDFSVIVMAYVTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 13 RFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES---- 67
+F+ T +W D + I+ V I++ P L I I+ N + M M P +
Sbjct: 741 KFANTYLIWDCSDSWLKIKHVVNLIVMDPFVDLAITICIVLNTLFMAMEHYPITDEFAGA 800
Query: 68 ---TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNL 123
++FTGI+T E K++A L+ + Y + WN D ++++L+ + +G+ D+ L
Sbjct: 801 LNVGNLVFTGIFTAEMVFKLIA----LDPYYYFQVGWNIFDGVIVSLSLMELGLSDVEGL 856
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 857 SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 911
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T I E + +FT I+ E
Sbjct: 1211 LRKTCFLIVEHNWFETFIIFMILMSSGALAFEDIYIEQRKTIKIILEYADKVFTYIFILE 1270
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1271 MLLKWVAYGFQ----KYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1326
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1327 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFSGK 1376
>gi|260166635|ref|NP_001159436.1| sodium channel protein type 1 subunit alpha isoform 3 [Homo
sapiens]
Length = 1981
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|27263190|dbj|BAC45228.1| Voltage-gated sodium channel alpha 1 subunit [Homo sapiens]
Length = 1981
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|74004472|ref|XP_858834.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Canis lupus familiaris]
Length = 1981
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|15421162|gb|AAK95360.1| voltage-gated sodium channel type I [Homo sapiens]
gi|23978422|dbj|BAC21102.1| Voltage-gated sodium channel alpha1 subunit [Homo sapiens]
Length = 1998
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|115583677|ref|NP_008851.3| sodium channel protein type 1 subunit alpha isoform 2 [Homo
sapiens]
gi|62420265|gb|AAX81984.1| unknown [Homo sapiens]
Length = 1998
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|426337574|ref|XP_004032776.1| PREDICTED: sodium channel protein type 1 subunit alpha [Gorilla
gorilla gorilla]
Length = 1964
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT I+ E +K +A G+ TY +AW WLDF+++ ++ V++
Sbjct: 1207 LEYADKVFTYIFILEMLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYS 1262
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1263 ELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN 1322
Query: 179 DSRGK 183
GK
Sbjct: 1323 LFAGK 1327
>gi|125630315|ref|NP_061203.2| sodium channel, voltage-gated, type I, alpha [Mus musculus]
Length = 1998
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNH 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|109099928|ref|XP_001100928.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Macaca mulatta]
Length = 1980
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|354487352|ref|XP_003505837.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 1981
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|291391669|ref|XP_002712297.1| PREDICTED: sodium channel, voltage-gated, type I, alpha subunit
isoform 3 [Oryctolagus cuniculus]
Length = 1981
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|260166633|ref|NP_001159435.1| sodium channel protein type 1 subunit alpha isoform 1 [Homo
sapiens]
gi|320461722|ref|NP_001189364.1| sodium channel protein type 1 subunit alpha isoform 1 [Homo
sapiens]
gi|12644229|sp|P35498.2|SCN1A_HUMAN RecName: Full=Sodium channel protein type 1 subunit alpha; AltName:
Full=Sodium channel protein brain I subunit alpha;
AltName: Full=Sodium channel protein type I subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.1
Length = 2009
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|338715737|ref|XP_001916728.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 1
subunit alpha [Equus caballus]
Length = 2010
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 740 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 799
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 800 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 855
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 856 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 911
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1208 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1267
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1268 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1323
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1324 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1373
>gi|296490593|tpg|DAA32706.1| TPA: sodium channel, voltage-gated, type I, alpha-like isoform 3
[Bos taurus]
Length = 1981
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|13540709|ref|NP_110502.1| sodium channel protein type 1 subunit alpha [Rattus norvegicus]
gi|116447|sp|P04774.1|SCN1A_RAT RecName: Full=Sodium channel protein type 1 subunit alpha; AltName:
Full=Sodium channel protein brain I subunit alpha;
AltName: Full=Sodium channel protein type I subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.1
gi|57217|emb|CAA27286.1| unnamed protein product [Rattus norvegicus]
gi|1041089|gb|AAA79965.1| Na+ channel [Rattus norvegicus]
gi|224959|prf||1204264A Na channel I protein
Length = 2009
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNH 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|344268028|ref|XP_003405866.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
4 [Loxodonta africana]
Length = 1981
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTKHFNH 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|149022137|gb|EDL79031.1| rCG26308, isoform CRA_a [Rattus norvegicus]
Length = 2009
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNH 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|291391667|ref|XP_002712296.1| PREDICTED: sodium channel, voltage-gated, type I, alpha subunit
isoform 2 [Oryctolagus cuniculus]
Length = 1998
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|363736022|ref|XP_003641647.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1989
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 714 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 774 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1181 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1240
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1241 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1296
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1297 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1346
>gi|344268024|ref|XP_003405864.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Loxodonta africana]
Length = 1948
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 678 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTKHFNH 737
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 738 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 793
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 794 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 849
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|426220969|ref|XP_004004684.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Ovis aries]
Length = 1981
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|74004470|ref|XP_858797.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Canis lupus familiaris]
Length = 1998
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|363735988|ref|XP_003641637.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 5
[Gallus gallus]
Length = 1985
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 720 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 779
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 780 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 835
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 836 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 891
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1186 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1245
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1246 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1301
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1302 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1351
>gi|354487356|ref|XP_003505839.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 1998
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|224054956|ref|XP_002197845.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Taeniopygia guttata]
Length = 2002
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 736 YKFANIFLIWDCSPHWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 795
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 796 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 851
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 852 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 907
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1203 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1262
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1263 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1318
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1319 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1368
>gi|344268026|ref|XP_003405865.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Loxodonta africana]
Length = 1998
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTKHFNH 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|297264207|ref|XP_002798939.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1917
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 678 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 737
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 738 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 793
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 794 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 849
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|296204652|ref|XP_002749420.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Callithrix jacchus]
Length = 1981
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 SPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 711 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 770
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1179 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|363735986|ref|XP_003641636.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Gallus gallus]
Length = 1956
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 691 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 750
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 751 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 806
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 807 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1157 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1216
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1217 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1272
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1273 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1322
>gi|74004474|ref|XP_535941.2| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Canis lupus familiaris]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|291391665|ref|XP_002712295.1| PREDICTED: sodium channel, voltage-gated, type I, alpha subunit
isoform 1 [Oryctolagus cuniculus]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|109099926|ref|XP_001101115.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Macaca mulatta]
Length = 1997
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|426220971|ref|XP_004004685.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Ovis aries]
Length = 1949
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 679 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 738
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 739 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 794
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 795 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 850
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|300794327|ref|NP_001180147.1| sodium channel protein type 1 subunit alpha [Bos taurus]
gi|296490592|tpg|DAA32705.1| TPA: sodium channel, voltage-gated, type I, alpha-like isoform 2
[Bos taurus]
Length = 1998
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|355750586|gb|EHH54913.1| hypothetical protein EGM_04020 [Macaca fascicularis]
Length = 2008
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|354487350|ref|XP_003505836.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 1956
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 686 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 745
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 746 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 801
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 802 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 857
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1154 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1213
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1214 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1269
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1270 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1319
>gi|109099924|ref|XP_001101023.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Macaca mulatta]
gi|402888526|ref|XP_003907609.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Papio anubis]
gi|402888528|ref|XP_003907610.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Papio anubis]
Length = 2008
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|297264202|ref|XP_002798937.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1986
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 717 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 776
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 777 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 832
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 833 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 888
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1185 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>gi|118093616|ref|XP_422025.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Gallus gallus]
Length = 2006
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|23978418|dbj|BAC21101.1| voltage-gated sodium channel alpha1 subunit [Homo sapiens]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|410968773|ref|XP_003990874.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 1
subunit alpha [Felis catus]
Length = 2008
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 738 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 797
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 798 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 853
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 854 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 909
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1206 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1265
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1266 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1321
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1322 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1371
>gi|395519663|ref|XP_003763962.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Sarcophilus harrisii]
Length = 2004
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 738 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 797
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 798 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 853
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 854 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 909
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1206 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1265
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1266 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1321
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1322 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1371
>gi|397507777|ref|XP_003824363.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Pan paniscus]
gi|397507779|ref|XP_003824364.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Pan paniscus]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|363736020|ref|XP_003641646.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1963
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 688 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 747
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 748 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 803
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 804 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1155 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1214
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1215 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1270
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1271 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1320
>gi|332814609|ref|XP_003309330.1| PREDICTED: sodium channel protein type 1 subunit alpha [Pan
troglodytes]
gi|410035829|ref|XP_001154262.2| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Pan troglodytes]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|426220967|ref|XP_004004683.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Ovis aries]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|344268022|ref|XP_003405863.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Loxodonta africana]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTKHFNH 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|334330207|ref|XP_003341317.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Monodelphis domestica]
Length = 1953
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 687 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 746
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 747 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 802
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 803 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 858
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1155 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1214
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1215 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1270
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1271 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1320
>gi|332234086|ref|XP_003266239.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Nomascus leucogenys]
gi|441648951|ref|XP_003266240.2| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Nomascus leucogenys]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|301786476|ref|XP_002928653.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1980
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 710 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 769
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 770 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 825
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 826 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 881
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1178 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1238 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1343
>gi|334330205|ref|XP_003341316.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Monodelphis domestica]
Length = 1977
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 711 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 770
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 771 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 826
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 827 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 882
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1179 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|229442279|gb|AAI72767.1| sodium channel, voltage-gated, type I, alpha [synthetic construct]
Length = 854
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLR 133
L+ LR+FR+LR
Sbjct: 844 LSVLRSFRLLR 854
>gi|395519669|ref|XP_003763965.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 4
[Sarcophilus harrisii]
Length = 1976
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 710 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 769
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 770 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 825
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 826 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 881
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1178 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1238 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1343
>gi|363736018|ref|XP_003641645.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 2017
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 742 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 801
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 802 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 857
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 858 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 913
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1209 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1268
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1269 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1324
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1325 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1374
>gi|395519665|ref|XP_003763963.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Sarcophilus harrisii]
Length = 1993
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 727 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 786
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 787 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1195 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|297264209|ref|XP_002798940.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1929
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 678 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 737
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 738 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 793
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 794 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 849
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|395844939|ref|XP_003795205.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Otolemur garnettii]
Length = 2013
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 738 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 797
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 798 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 853
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 854 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 909
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1205 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1264
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1265 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1320
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1321 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1370
>gi|301614640|ref|XP_002936795.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Xenopus (Silurana) tropicalis]
Length = 1953
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+R+VAI +LVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNRGKAIFRFSATSALYILTPFNPLRKVAIKVLVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEKFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
++F+ T +W + + ++ + I++ P L I I+ N + M M P T E +
Sbjct: 726 YKFANTFLIWDCCENWLTVKHIVKLIVMDPFVDLAITICIVLNTLFMAMEHYPMTKEFND 785
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+T E K++A L+ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 786 VLSIGNLVFTGIFTAEMVFKLIA----LDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 841
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 842 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 897
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1199 RKTCYTIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEM 1258
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF+ Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1259 LLKWVAYGFV----KYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRP 1314
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 LRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|126326271|ref|XP_001367386.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Monodelphis domestica]
Length = 1994
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 728 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 787
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1196 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|12642270|gb|AAK00217.1|AF225985_1 voltage-gated sodium channel alpha subunit SCN1A [Homo sapiens]
Length = 1999
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS ++W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFSIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|395519671|ref|XP_003763966.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 5
[Sarcophilus harrisii]
Length = 1947
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 681 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 740
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 741 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 796
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 797 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 852
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1149 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|363735982|ref|XP_003641634.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Gallus gallus]
Length = 2013
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 748 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 807
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 808 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 863
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 864 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 919
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1214 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1273
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1274 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1329
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1330 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1379
>gi|354487354|ref|XP_003505838.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|334330203|ref|XP_003341315.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Monodelphis domestica]
Length = 2005
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 739 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 798
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1207 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|297668755|ref|XP_002812591.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Pongo abelii]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|118093608|ref|XP_001233839.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Gallus gallus]
Length = 2002
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 737 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 796
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1203 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1262
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1263 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1318
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1319 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1368
>gi|426220965|ref|XP_004004682.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 1
[Ovis aries]
Length = 1998
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|301786474|ref|XP_002928652.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 1997
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 727 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 786
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 787 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|224054936|ref|XP_002197631.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Taeniopygia guttata]
Length = 2007
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 732 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 792 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1199 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1258
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1259 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1314
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>gi|403258867|ref|XP_003921964.1| PREDICTED: sodium channel protein type 1 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 SPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|355564939|gb|EHH21428.1| hypothetical protein EGK_04494 [Macaca mulatta]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1208 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1267
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1268 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1323
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1324 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1373
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRT-FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+ F +LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSSFSMLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 911
>gi|395844941|ref|XP_003795206.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
2 [Otolemur garnettii]
Length = 2002
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 727 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 786
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 787 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|395844943|ref|XP_003795207.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
3 [Otolemur garnettii]
Length = 1985
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 710 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 769
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 770 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 825
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 826 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 881
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1177 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1236
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1237 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1292
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1293 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1342
>gi|296204650|ref|XP_002749419.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 2
[Callithrix jacchus]
Length = 1998
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 SPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|363736041|ref|XP_003641655.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
6 [Gallus gallus]
Length = 1968
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 692 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 751
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 752 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 807
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 863
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1161 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1220
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1221 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1276
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1277 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1326
>gi|296490591|tpg|DAA32704.1| TPA: sodium channel, voltage-gated, type I, alpha-like isoform 1
[Bos taurus]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|390464438|ref|XP_003733221.1| PREDICTED: sodium channel protein type 1 subunit alpha [Callithrix
jacchus]
Length = 2009
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 SPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|348585685|ref|XP_003478601.1| PREDICTED: sodium channel protein type 1 subunit alpha-like [Cavia
porcellus]
Length = 1957
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ +++ P L I I+ N + M M P E
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHFVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A G+ TY +AW WLDF+++
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIV 1281
>gi|301786472|ref|XP_002928651.1| PREDICTED: sodium channel protein type 1 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 2008
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 738 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 797
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 798 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 853
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 854 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 909
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1206 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1265
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1266 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1321
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1322 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1371
>gi|395519659|ref|XP_003763960.1| PREDICTED: sodium channel protein type 2 subunit alpha [Sarcophilus
harrisii]
Length = 2007
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 732 YKFANTCLIWDCCEPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 792 VLYVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1199 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1258
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1259 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1314
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>gi|426220973|ref|XP_004004686.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 5
[Ovis aries]
Length = 1956
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 727 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 786
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 787 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A G+ TY +AW WLDF+++
Sbjct: 1255 MLLKWVAYGYQ----TYFTNAWCWLDFLIV 1280
>gi|297264205|ref|XP_002798938.1| PREDICTED: sodium channel protein type 2 subunit alpha [Macaca
mulatta]
Length = 1956
Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A G+ TY +AW WLDF+++
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIV 1281
>gi|363736043|ref|XP_003641656.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
7 [Gallus gallus]
Length = 1970
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 735 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 794
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 795 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 850
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 851 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 906
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1204 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A GF + Y +AW WLDF+++
Sbjct: 1264 MLLKWVAYGFQI----YFTNAWCWLDFLIV 1289
>gi|326922830|ref|XP_003207647.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Meleagris gallopavo]
Length = 2002
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 734 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 793
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 794 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 849
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 850 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 905
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1183 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1242
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1243 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1298
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1299 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1348
>gi|363736033|ref|XP_003641651.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Gallus gallus]
Length = 2011
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 735 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 794
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 795 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 850
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 851 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 906
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1204 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1264 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1319
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1320 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1369
>gi|90082749|dbj|BAE90556.1| unnamed protein product [Macaca fascicularis]
Length = 321
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
>gi|327277922|ref|XP_003223712.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Anolis carolinensis]
Length = 2009
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT A+++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKAIFRFSATSAVYLLTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W DP+ ++ V I++ P L I I+ N + M M P TP +
Sbjct: 734 YKFANMCLIWDCCDPWLKVKHVVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFNN 793
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 794 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 849
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 850 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 905
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1201 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1260
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1261 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALR 1316
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1317 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1366
>gi|334330182|ref|XP_003341313.1| PREDICTED: sodium channel protein type 2 subunit alpha [Monodelphis
domestica]
Length = 1957
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YKFANTCLIWDCCEPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLYVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV LR ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALRKPDLVLAIIVFIFAVVGMQ 853
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|149639504|ref|XP_001512814.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Ornithorhynchus anatinus]
Length = 1957
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNRGKAIFRFSATSALYILTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCWEPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFSH 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|149639500|ref|XP_001512686.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Ornithorhynchus anatinus]
Length = 2008
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNRGKAIFRFSATSALYILTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 733 YKFANMCLIWDCWEPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFSH 792
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 793 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 848
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 849 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 904
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1200 LRKTCYRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1259
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1260 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1315
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1316 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1365
>gi|126326263|ref|XP_001367197.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Monodelphis domestica]
Length = 2007
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 732 YKFANTCLIWDCCEPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 792 VLYVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV LR ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALRKPDLVLAIIVFIFAVVGMQ 903
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1199 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1258
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1259 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1314
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>gi|327277926|ref|XP_003223714.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Anolis carolinensis]
Length = 1963
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT A+++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKAIFRFSATSAVYLLTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W DP+ ++ V I++ P L I I+ N + M M P TP +
Sbjct: 688 YKFANMCLIWDCCDPWLKVKHVVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFNN 747
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 748 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 803
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 804 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1155 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1214
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1215 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALR 1270
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1271 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1320
>gi|134025843|gb|AAI36232.1| LOC100125099 protein [Xenopus (Silurana) tropicalis]
Length = 507
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+RR++I ILVH LFS+ I+ TILTNC M M
Sbjct: 91 TFIVLNRGKAIFRFSATSALYILTPFNPLRRISIKILVHSLFSMLIMCTILTNCFFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF LESFT+LRD WNWLDF VI +AYVT ++
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLVKILARGFCLESFTFLRDPWNWLDFSVIVMAYVTEFVN 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
>gi|343098400|tpg|DAA34931.1| TPA_inf: voltage-dependent sodium channel SCN2A [Anolis
carolinensis]
Length = 1990
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT A+++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKAIFRFSATSAVYLLTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W DP+ ++ V I++ P L I I+ N + M M P TP +
Sbjct: 715 YKFANMCLIWDCCDPWLKVKHVVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFNN 774
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 775 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1182 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1242 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALR 1297
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1298 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1347
>gi|301619885|ref|XP_002939316.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Xenopus (Silurana) tropicalis]
Length = 1589
Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK +FRFSAT AL++L PFNP+R+ AI ILVH LF++ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKTLFRFSATSALYILTPFNPVRQAAIKILVHSLFNMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYT ES +K++ARGF LE FT+LRD WNWLDF VI LAYVT ++
Sbjct: 149 NPPEWTKNVEYTFTGIYTLESLIKILARGFCLEKFTFLRDPWNWLDFSVIVLAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +F I+ E
Sbjct: 1184 LRKTCYTIVEHSWFESFIIFMILLSSGALAFEDIYVEQRRNVKAILEYADKVFAYIFIME 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GFI Y +AW WLDFI++ ++ V++ +LG + +LRT R LR
Sbjct: 1244 MLLKWVAYGFI----KYFTNAWCWLDFIIVDISLVSLIANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TP---- 63
++F+ +W + + ++R+ I++ P L I +I+ N I M + TP
Sbjct: 714 YKFANCFLIWDCCEAWLKVKRIVKLIVMDPFVDLAITISIVLNTIFMAVEHAHMTPYFIS 773
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGN 122
+ + +FTGI+T E +K++A L+ + Y ++ WN D ++++L+ + +G+ G
Sbjct: 774 VLTTGNQVFTGIFTAEMVLKLIA----LDPYYYFQEGWNIFDGLIVSLSLMELGLSSTGG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 FSVLRSFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|334330175|ref|XP_003341310.1| PREDICTED: sodium channel protein type 3 subunit alpha [Monodelphis
domestica]
Length = 1952
Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W DP+ ++R+ I++ P L I I+ N + M M P +
Sbjct: 681 YRFANTFLIWDCWDPWLKVKRIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFNS 740
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 741 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 796
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 797 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 852
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|126326259|ref|XP_001367104.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Monodelphis domestica]
Length = 2003
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W DP+ ++R+ I++ P L I I+ N + M M P +
Sbjct: 732 YRFANTFLIWDCWDPWLKVKRIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFNS 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|126326261|ref|XP_001367154.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Monodelphis domestica]
Length = 2002
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W DP+ ++R+ I++ P L I I+ N + M M P +
Sbjct: 731 YRFANTFLIWDCWDPWLKVKRIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFNS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|363735990|ref|XP_003641638.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 6
[Gallus gallus]
Length = 1956
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 691 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 750
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 751 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 806
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 807 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1157 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1216
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1217 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1272
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1273 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1322
>gi|363735992|ref|XP_003641639.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 7
[Gallus gallus]
Length = 1961
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 737 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 796
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1203 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1262
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A G+ TY +AW WLDF+++
Sbjct: 1263 MLLKWVAYGYQ----TYFTNAWCWLDFLIV 1288
>gi|363736025|ref|XP_003641648.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1963
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 688 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 747
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 748 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 803
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 804 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1155 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1214
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1215 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1270
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1271 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1320
>gi|118093618|ref|XP_001233892.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Gallus gallus]
Length = 2006
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|326922828|ref|XP_003207646.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Meleagris gallopavo]
Length = 1352
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 355 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 414
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 415 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 470
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 471 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 526
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 822 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 881
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 882 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 937
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 938 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 987
>gi|363735984|ref|XP_003641635.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Gallus gallus]
Length = 2002
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + +++ P L I I+ N + M M P +
Sbjct: 737 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 796
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1203 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1262
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1263 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1318
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1319 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1368
>gi|301606946|ref|XP_002933087.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Xenopus (Silurana) tropicalis]
Length = 1797
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++LDPFNPIRR AI +L+H LFSLFI+ TILTNC+ M M
Sbjct: 87 TFIVLNKGKAIFRFTATKALYLLDPFNPIRRGAIKVLIHSLFSLFIMFTILTNCVFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++SFT+LRD WNWLDF VI +AY T +D
Sbjct: 147 DPPPWSKNVEYTFTGIYTFESLIKILARGFCIDSFTFLRDPWNWLDFCVIVMAYTTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTLFCLAVFALIGLQ 265
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W D + + ++++ P L I I+ N + M M P E E
Sbjct: 585 YKFANTFLIWDCCDLWVKFKEFVRFVVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFEG 644
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 645 VLNVGNLVFTGIFAAEMFFKIIA----LDPYYYFQVGWNIFDSIIVTLSLVELGLANVEG 700
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 701 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 756
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT I+ FE +K A GF + Y +AW WLDF+++ ++ +++
Sbjct: 1045 LEYADKVFTYIFVFEMLLKWTAYGFKI----YFTNAWCWLDFLIVDVSLISLTANWLGYS 1100
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1101 ELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN 1160
Query: 179 DSRGK 183
GK
Sbjct: 1161 LFAGK 1165
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA------IYILV-HPLFSLFIITTILTN 53
GKDIF ++A L P PI R +Y V LF + I+ I N
Sbjct: 1287 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNKIQGLVYDFVTKQLFDIVIMILICLN 1346
Query: 54 CI-LMIMPGTPTIESTEVIFT------GIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ +MI + E T+++F I+T E +K+ A + + WN DF
Sbjct: 1347 MVTMMIETDDQSQEKTDILFKINLVFIVIFTAECVLKMFAL-----RYYFFTIGWNIFDF 1401
Query: 107 IVIALAYVTMGIDLGNLAA-----------LRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V GI L +L A +R R+ R L+ + G++T++ A++ S+
Sbjct: 1402 VVVILSIV--GIVLSDLIAEYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1459
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1460 PALFNIGLLLFLVMFIYSIFGMSN 1483
>gi|395519667|ref|XP_003763964.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 3
[Sarcophilus harrisii]
Length = 1993
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN +ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNFSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 727 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 786
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 787 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1195 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|395519673|ref|XP_003763967.1| PREDICTED: sodium channel protein type 1 subunit alpha isoform 6
[Sarcophilus harrisii]
Length = 1952
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN +ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNFSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P + ++ + I++ P L I I+ N + M M P TP +
Sbjct: 727 YKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFNN 786
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 787 VLSVGNLVFTGIFTGEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1195 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A G+ TY +AW WLDF+++
Sbjct: 1255 MLLKWVAYGYQ----TYFTNAWCWLDFLIV 1280
>gi|149639506|ref|XP_001512785.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Ornithorhynchus anatinus]
Length = 1957
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNRGKAIFRFSATSALYILTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCWEPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFSH 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|358410898|ref|XP_003581866.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2001
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 732 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 791
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|149639502|ref|XP_001512721.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Ornithorhynchus anatinus]
Length = 2008
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNRGKAIFRFSATSALYILTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W +P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 733 YKFANMCLIWDCWEPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFSH 792
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 793 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 848
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 849 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 904
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1200 LRKTCYRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1259
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1260 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1315
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1316 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1365
>gi|426220993|ref|XP_004004696.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 4
[Ovis aries]
Length = 1951
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 682 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 741
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|327277924|ref|XP_003223713.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Anolis carolinensis]
Length = 2009
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT A+++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKAIFRFSATSAVYLLTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVN 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W DP+ ++ V I++ P L I I+ N + M M P TP +
Sbjct: 734 YKFANMCLIWDCCDPWLKVKHVVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFNN 793
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 794 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 849
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 850 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 905
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1201 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1260
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1261 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALR 1316
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1317 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1366
>gi|359063050|ref|XP_003585789.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2001
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 732 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 791
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|426220989|ref|XP_004004694.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Ovis aries]
Length = 1999
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 730 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|327277928|ref|XP_003223715.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Anolis carolinensis]
Length = 1963
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT A+++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKAIFRFSATSAVYLLTPFNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFTVITFAYVTEFVN 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W DP+ ++ V I++ P L I I+ N + M M P TP +
Sbjct: 688 YKFANMCLIWDCCDPWLKVKHVVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFNN 747
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 748 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 803
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 804 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1155 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1214
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1215 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLISLTANALGYSELGAIKSLRTLRALR 1270
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1271 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1320
>gi|297471670|ref|XP_002685378.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Bos taurus]
gi|296490595|tpg|DAA32708.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
1 [Bos taurus]
Length = 1999
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 730 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 789
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|358410902|ref|XP_003581868.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 744 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 803
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 804 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 859
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 860 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 915
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1208 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1267
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1268 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1323
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1324 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1373
>gi|297465093|ref|XP_002703656.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1951
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 682 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 741
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|297471674|ref|XP_002685380.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Bos taurus]
gi|296490597|tpg|DAA32710.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
3 [Bos taurus]
Length = 1951
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 682 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 741
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|358410900|ref|XP_003581867.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1985
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 716 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 775
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 776 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1180 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1239
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1240 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1295
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1296 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1345
>gi|354478619|ref|XP_003501512.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
6 [Cricetulus griseus]
Length = 2001
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 732 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|354478609|ref|XP_003501507.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 2000
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|6981510|ref|NP_037251.1| sodium channel protein type 3 subunit alpha [Rattus norvegicus]
gi|116449|sp|P08104.1|SCN3A_RAT RecName: Full=Sodium channel protein type 3 subunit alpha; AltName:
Full=Sodium channel protein brain III subunit alpha;
AltName: Full=Sodium channel protein type III subunit
alpha; AltName: Full=Voltage-gated sodium channel
subtype III; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.3
gi|57211|emb|CAA68735.1| unnamed protein product [Rattus norvegicus]
Length = 1951
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P +
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|149022130|gb|EDL79024.1| rCG26412 [Rattus norvegicus]
Length = 1951
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P +
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|119887606|ref|XP_613914.3| PREDICTED: sodium channel protein type 3 subunit alpha isoform 4
[Bos taurus]
Length = 1999
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 730 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 789
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|359063054|ref|XP_003585790.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1985
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 716 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 775
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 776 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1180 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1239
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1240 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1295
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1296 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1345
>gi|4325288|gb|AAD17315.1| voltage-dependent sodium channel [Cynops pyrrhogaster]
Length = 2007
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFNP+RRVAI +LVH LFS+ I+ TILTNC+ M +
Sbjct: 91 TFIVLNRGKAIFRFSATSALYMLTPFNPLRRVAIKVLVHSLFSMLIMFTILTNCVFMTLS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE+FT+LRD WNWLDF VI++AYVT ++
Sbjct: 151 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLENFTFLRDPWNWLDFSVISMAYVTEFVN 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES---- 67
+F+ T +W +P+ I+ + I++ P L I I+ N + M M P +
Sbjct: 729 KFANTYLIWDCCEPWLKIKEIVNIIVMDPFVDLGITICIVLNTLFMAMEHYPMTKEFNHV 788
Query: 68 ---TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNL 123
++FTGI+T E K++A L+ + Y + WN D I+++L+ + +G+ ++ L
Sbjct: 789 LTVGNLVFTGIFTAEMVFKLIA----LDPYYYFQVGWNIFDGIIVSLSLMELGLQNVEGL 844
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 845 SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T I E + +FT I+ E
Sbjct: 1198 LRKTCFKIVEHNWFETFIIFMILMSSGALAFEDIYIEQRKTIKIVLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V+ MG +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQ----KYFTNAWCWLDFLIVDVSLVSLIANAMGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFSGK 1363
>gi|343098402|tpg|DAA34932.1| TPA_inf: voltage-dependent sodium channel SCN3A [Anolis
carolinensis]
Length = 2007
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH FS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSYFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVIVMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ + I++ P L I I+ N + M M P
Sbjct: 732 YRFANTYLIWDCWRPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTHYFNH 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLLVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1201 RKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEM 1260
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1261 LLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRP 1316
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1317 LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1365
>gi|359063058|ref|XP_003585791.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 744 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 803
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 804 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 859
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 860 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 915
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1208 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1267
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1268 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1323
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1324 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1373
>gi|449491396|ref|XP_004175478.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha [Taeniopygia guttata]
Length = 1854
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNPIRR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 96 TFIVLNKGKSIFRFSATPALYMLGPFNPIRRGAIKVLIHSLFSMFIMITILTNCVFMTMS 155
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K+++RGF ++ FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 156 NPPAWSKNVEYAFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITEFVD 215
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 216 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 274
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P+ ++ +++ P L I I N + M M P E E
Sbjct: 591 YKFAHTFLVWNCCHPWVKLKEFVKLVVMDPFVDLGITICIALNTLFMAMXHYPMTEXFEN 650
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D ++ L+ V +G+ ++
Sbjct: 651 VLGVGQLVFTGIFTAEMVLKLIA----LDPYEYFQQGWNIFDSFIVTLSLVELGLANVQG 706
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 707 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 762
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +F+ I+ E
Sbjct: 1049 LRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIE 1108
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1109 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLVSLTANWLGYSELGAIKSLRTLRALR 1164
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1165 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1214
>gi|160707887|ref|NP_061202.3| sodium channel, voltage-gated, type III, alpha [Mus musculus]
Length = 1947
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDSWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|354478613|ref|XP_003501509.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 1951
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|114581463|ref|XP_001152748.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 9
[Pan troglodytes]
gi|397500550|ref|XP_003820973.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Pan paniscus]
Length = 2000
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|402888521|ref|XP_003907607.1| PREDICTED: sodium channel protein type 3 subunit alpha [Papio
anubis]
Length = 1988
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 77 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 136
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 137 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 196
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 197 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 255
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 719 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 778
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 779 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 834
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 835 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 890
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1183 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1242
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1243 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1298
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1299 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1348
>gi|403258881|ref|XP_003921970.1| PREDICTED: sodium channel protein type 3 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1999
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 88 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 730 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|126362947|ref|NP_001075145.1| sodium channel protein type 3 subunit alpha isoform 2 [Homo
sapiens]
gi|12382858|gb|AAG53415.1| voltage-gated sodium channel type III alpha subunit [Homo sapiens]
Length = 1951
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|332234073|ref|XP_003266232.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Nomascus leucogenys]
Length = 2000
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|229442499|gb|AAI72822.1| sodium channel, voltage-gated, type III, alpha [synthetic
construct]
Length = 494
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
>gi|12642274|gb|AAK00219.1|AF225987_1 voltage-gated sodium channel alpha subunit SCN3A [Homo sapiens]
Length = 2000
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|291391643|ref|XP_002712282.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 1
[Oryctolagus cuniculus]
Length = 2000
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++R+ I++ P L I I+ N + M M P +
Sbjct: 731 YRFANVFLIWDCCEAWLKVKRLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLAVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|348585911|ref|XP_003478714.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
1 [Cavia porcellus]
Length = 1999
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++ + I++ P L I I+ N + M M P +
Sbjct: 730 YRFANVFLIWDCCEAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|297264186|ref|XP_002798935.1| PREDICTED: sodium channel protein type 3 subunit alpha [Macaca
mulatta]
Length = 2013
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 744 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 803
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 804 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 859
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 860 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 915
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1208 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1267
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1268 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1323
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1324 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1373
>gi|114581473|ref|XP_001152557.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 7
[Pan troglodytes]
gi|397500554|ref|XP_003820975.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Pan paniscus]
Length = 1951
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|126362949|ref|NP_008853.3| sodium channel protein type 3 subunit alpha isoform 1 [Homo
sapiens]
gi|62822524|gb|AAY15072.1| unknown [Homo sapiens]
Length = 2000
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|410968777|ref|XP_003990876.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 3
subunit alpha [Felis catus]
Length = 1991
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 790
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|194222269|ref|XP_001493754.2| PREDICTED: sodium channel protein type 3 subunit alpha [Equus
caballus]
Length = 1969
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1164 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1223
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1224 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLAANALGYSELGAIKSLRTLRALR 1279
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1280 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1329
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 700 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 759
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 760 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 815
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 816 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 871
>gi|395844930|ref|XP_003795201.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 5
[Otolemur garnettii]
Length = 1920
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL+++ PFNP+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 85 TFIVLNKGKAIFRFNATPALYMISPFNPLRRLSIKILVHSLFSMLIMCTILTNCIFMTMS 144
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 145 NPPEWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFIVIVFAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 263
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1131 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1190
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1191 LLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALR 1246
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1247 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1296
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P + E
Sbjct: 666 YRFAHTFLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFEN 725
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + D+
Sbjct: 726 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEG 781
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 782 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 837
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ + F + I+ I N
Sbjct: 1401 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDIVTNQAFDITIMVLICLN 1460
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1461 MVTMMVEKEDQSDEMTNVLYWINVVFITLFTGECVLKLIS----LRHY-YFTVGWNIFDF 1515
Query: 107 IVIALAYVTM---GIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESVKN 157
+V+ L++V M G+ + FRV+R L+ + G++T++ A++ S+
Sbjct: 1516 VVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPA 1575
Query: 158 LRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1576 LFNIGLLLFLVMFIYAIFGMSN 1597
>gi|345797037|ref|XP_849168.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 3
subunit alpha isoform 3 [Canis lupus familiaris]
Length = 1999
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 730 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 789
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|109099886|ref|XP_001099096.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Macaca mulatta]
Length = 2000
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|380805227|gb|AFE74489.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 890
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 10 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 69
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 70 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 129
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 130 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 188
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 650 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 709
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 710 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 765
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 766 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 821
>gi|119631738|gb|EAX11333.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_c [Homo
sapiens]
Length = 1494
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 714 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 774 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1168 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1227
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1228 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1283
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1284 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1333
>gi|109099888|ref|XP_001098987.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Macaca mulatta]
Length = 1951
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|395732428|ref|XP_002812590.2| PREDICTED: sodium channel protein type 2 subunit alpha [Pongo
abelii]
Length = 710
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 109 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 168
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 169 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 228
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 229 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 287
>gi|291391647|ref|XP_002712284.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 3
[Oryctolagus cuniculus]
Length = 1951
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++R+ I++ P L I I+ N + M M P +
Sbjct: 682 YRFANVFLIWDCCEAWLKVKRLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLAVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|12642272|gb|AAK00218.1|AF225986_1 voltage-gated sodium channel alpha subunit splice variant SCN3A-s
[Homo sapiens]
Length = 1951
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|395844928|ref|XP_003795200.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 4
[Otolemur garnettii]
Length = 1938
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL+++ PFNP+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 85 TFIVLNKGKAIFRFNATPALYMISPFNPLRRLSIKILVHSLFSMLIMCTILTNCIFMTMS 144
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 145 NPPEWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFIVIVFAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 263
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1131 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1190
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1191 LLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALR 1246
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1247 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1296
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P + E
Sbjct: 666 YRFAHTFLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFEN 725
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + D+
Sbjct: 726 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEG 781
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 782 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 837
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ + F + I+ I N
Sbjct: 1419 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDIVTNQAFDITIMVLICLN 1478
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1479 MVTMMVEKEDQSDEMTNVLYWINVVFITLFTGECVLKLIS----LRHY-YFTVGWNIFDF 1533
Query: 107 IVIALAYVTM---GIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESVKN 157
+V+ L++V M G+ + FRV+R L+ + G++T++ A++ S+
Sbjct: 1534 VVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPA 1593
Query: 158 LRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1594 LFNIGLLLFLVMFIYAIFGMSN 1615
>gi|348585913|ref|XP_003478715.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
2 [Cavia porcellus]
Length = 1950
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++ + I++ P L I I+ N + M M P +
Sbjct: 681 YRFANVFLIWDCCEAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 740
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 741 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 796
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 797 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 852
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1145 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1204
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1205 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1260
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1261 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1310
>gi|342837675|tpg|DAA34927.1| TPA_inf: voltage-dependent sodium channel SCN3A [Gallus gallus]
Length = 1917
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 150/181 (82%), Gaps = 3/181 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSSTLFSMLIMCTILTNCVFMT 149
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT
Sbjct: 150 MSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEF 209
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 210 VDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 269
Query: 178 Q 178
Q
Sbjct: 270 Q 270
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 737 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 796
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 797 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 19/132 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1206 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1265
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1266 MLLKWVAYGFQI----YFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1321
Query: 134 ALKTVAIVPGLK 145
L+ ++ G++
Sbjct: 1322 PLRALSRFEGMR 1333
>gi|119631736|gb|EAX11331.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_a [Homo
sapiens]
Length = 1521
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|395844924|ref|XP_003795198.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Otolemur garnettii]
Length = 1992
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL+++ PFNP+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 85 TFIVLNKGKAIFRFNATPALYMISPFNPLRRLSIKILVHSLFSMLIMCTILTNCIFMTMS 144
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 145 NPPEWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFIVIVFAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 263
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1185 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1245 LLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P + E
Sbjct: 720 YRFAHTFLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFEN 779
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + D+
Sbjct: 780 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEG 835
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 836 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 891
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ + F + I+ I N
Sbjct: 1473 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDIVTNQAFDITIMVLICLN 1532
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1533 MVTMMVEKEDQSDEMTNVLYWINVVFITLFTGECVLKLIS----LRHY-YFTVGWNIFDF 1587
Query: 107 IVIALAYVTM---GIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESVKN 157
+V+ L++V M G+ + FRV+R L+ + G++T++ A++ S+
Sbjct: 1588 VVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPA 1647
Query: 158 LRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1648 LFNIGLLLFLVMFIYAIFGMSN 1669
>gi|229442477|gb|AAI72765.1| sodium channel, voltage-gated, type II, alpha isoform 1 [synthetic
construct]
Length = 1154
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
>gi|395844934|ref|XP_003795203.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 7
[Otolemur garnettii]
Length = 1908
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL+++ PFNP+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 85 TFIVLNKGKAIFRFNATPALYMISPFNPLRRLSIKILVHSLFSMLIMCTILTNCIFMTMS 144
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 145 NPPEWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFIVIVFAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 263
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1131 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1190
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1191 LLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALR 1246
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1247 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1296
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P + E
Sbjct: 666 YRFAHTFLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFEN 725
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + D+
Sbjct: 726 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEG 781
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 782 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 837
>gi|426337564|ref|XP_004032772.1| PREDICTED: sodium channel protein type 3 subunit alpha [Gorilla
gorilla gorilla]
Length = 1843
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1038 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1097
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1098 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1153
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1154 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1203
>gi|395844932|ref|XP_003795202.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 6
[Otolemur garnettii]
Length = 1964
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL+++ PFNP+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 85 TFIVLNKGKAIFRFNATPALYMISPFNPLRRLSIKILVHSLFSMLIMCTILTNCIFMTMS 144
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 145 NPPEWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFIVIVFAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 263
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1157 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1216
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1217 LLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALR 1272
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1273 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1322
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P + E
Sbjct: 692 YRFAHTFLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFEN 751
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + D+
Sbjct: 752 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEG 807
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 863
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ + F + I+ I N
Sbjct: 1445 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDIVTNQAFDITIMVLICLN 1504
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1505 MVTMMVEKEDQSDEMTNVLYWINVVFITLFTGECVLKLIS----LRHY-YFTVGWNIFDF 1559
Query: 107 IVIALAYVTM---GIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESVKN 157
+V+ L++V M G+ + FRV+R L+ + G++T++ A++ S+
Sbjct: 1560 VVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPA 1619
Query: 158 LRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1620 LFNIGLLLFLVMFIYAIFGMSN 1641
>gi|395844922|ref|XP_003795197.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Otolemur garnettii]
Length = 1976
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL+++ PFNP+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMISPFNPLRRLSIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFIVIVFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1169 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1228
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1229 LLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALR 1284
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1285 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1334
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P + E
Sbjct: 704 YRFAHTFLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFEN 763
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + D+
Sbjct: 764 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ + F + I+ I N
Sbjct: 1457 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDIVTNQAFDITIMVLICLN 1516
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1517 MVTMMVEKEDQSDEMTNVLYWINVVFITLFTGECVLKLIS----LRHY-YFTVGWNIFDF 1571
Query: 107 IVIALAYVTM---GIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESVKN 157
+V+ L++V M G+ + FRV+R L+ + G++T++ A++ S+
Sbjct: 1572 VVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPA 1631
Query: 158 LRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1632 LFNIGLLLFLVMFIYAIFGMSN 1653
>gi|62087356|dbj|BAD92125.1| Sodium channel protein type II alpha subunit variant [Homo sapiens]
Length = 1315
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 97 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 156
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 157 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 216
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 217 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 275
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 737 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 796
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1204 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
+K +A GF + Y +AW WLDF+++ ++
Sbjct: 1264 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVS 1292
>gi|403258875|ref|XP_003921967.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403258877|ref|XP_003921968.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 2005
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|334330177|ref|XP_003341311.1| PREDICTED: sodium channel protein type 3 subunit alpha [Monodelphis
domestica]
Length = 1952
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W DP+ ++R+ I++ P L I I+ N + M M P +
Sbjct: 681 YRFANTFLIWDCWDPWLKVKRIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFNS 740
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 741 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 796
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 797 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 852
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|296204670|ref|XP_002749429.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Callithrix jacchus]
gi|296204672|ref|XP_002749430.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Callithrix jacchus]
Length = 2005
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|109099894|ref|XP_001100011.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
6 [Macaca mulatta]
gi|109099896|ref|XP_001100368.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
10 [Macaca mulatta]
Length = 2005
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|380805619|gb|AFE74685.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 890
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 10 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 69
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 70 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 129
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 130 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 188
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 650 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 709
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 710 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 765
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 766 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 821
>gi|93141210|ref|NP_066287.2| sodium channel protein type 2 subunit alpha isoform 1 [Homo
sapiens]
gi|93141212|ref|NP_001035232.1| sodium channel protein type 2 subunit alpha isoform 1 [Homo
sapiens]
gi|25014053|sp|Q99250.3|SCN2A_HUMAN RecName: Full=Sodium channel protein type 2 subunit alpha; AltName:
Full=HBSC II; AltName: Full=Sodium channel protein brain
II subunit alpha; AltName: Full=Sodium channel protein
type II subunit alpha; AltName: Full=Voltage-gated
sodium channel subunit alpha Nav1.2
gi|12382817|gb|AAG53413.1| voltage-gated sodium channel type II alpha subunit [Homo sapiens]
gi|62822423|gb|AAY14971.1| unknown [Homo sapiens]
gi|260158896|gb|ACX32328.1| sodium channel, voltage-gated, type II, alpha subunit isoform 1
[synthetic construct]
Length = 2005
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|126326257|ref|XP_001367056.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Monodelphis domestica]
Length = 2003
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W DP+ ++R+ I++ P L I I+ N + M M P +
Sbjct: 732 YRFANTFLIWDCWDPWLKVKRIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFNS 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|354478627|ref|XP_003501516.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 2017
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 742 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 801
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 802 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 857
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 858 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 913
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1209 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1268
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1269 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1324
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1325 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1374
>gi|114581489|ref|XP_001153476.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 7
[Pan troglodytes]
gi|114581491|ref|XP_001153541.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 8
[Pan troglodytes]
Length = 2005
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|397500544|ref|XP_003820970.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Pan paniscus]
gi|397500546|ref|XP_003820971.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Pan paniscus]
Length = 2005
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|149730665|ref|XP_001495618.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Equus caballus]
Length = 2006
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|338715734|ref|XP_003363318.1| PREDICTED: sodium channel protein type 2 subunit alpha [Equus
caballus]
Length = 1957
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|109099902|ref|XP_001099916.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
5 [Macaca mulatta]
Length = 2017
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 742 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 801
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 802 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 857
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 858 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 913
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1209 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1268
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1269 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1324
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1325 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1374
>gi|354478631|ref|XP_003501518.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
6 [Cricetulus griseus]
Length = 1989
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 714 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 774 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1181 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1240
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1241 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1296
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1297 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1346
>gi|119631733|gb|EAX11328.1| sodium channel, voltage-gated, type II, alpha 2, isoform CRA_a
[Homo sapiens]
gi|119631734|gb|EAX11329.1| sodium channel, voltage-gated, type II, alpha 2, isoform CRA_a
[Homo sapiens]
Length = 1518
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|348585691|ref|XP_003478604.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Cavia
porcellus]
Length = 1969
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1161 VRKTCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1220
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1221 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1276
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1277 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1326
>gi|297465091|ref|XP_002703655.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2000
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 731 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|426220991|ref|XP_004004695.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Ovis aries]
Length = 1951
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 682 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 741
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|457879|gb|AAA18895.1| voltage-gated sodium channel [Homo sapiens]
Length = 2005
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRAVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|297471672|ref|XP_002685379.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Bos taurus]
gi|296490596|tpg|DAA32709.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
2 [Bos taurus]
Length = 2000
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 731 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 790
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|426220987|ref|XP_004004693.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 1
[Ovis aries]
Length = 1999
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 730 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1194 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1254 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|410968761|ref|XP_003990868.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Felis catus]
Length = 2006
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|354478621|ref|XP_003501513.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 2006
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|221136923|ref|NP_001137581.1| sodium channel protein type 2 subunit alpha [Bos taurus]
gi|296490579|tpg|DAA32692.1| TPA: sodium channel, voltage-gated, type II, alpha subunit [Bos
taurus]
Length = 2006
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|358410894|ref|XP_003581864.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 744 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 803
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 804 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 859
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 860 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 915
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1208 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1267
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1268 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1323
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1324 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1373
>gi|426220979|ref|XP_004004689.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Ovis aries]
gi|426220981|ref|XP_004004690.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Ovis aries]
Length = 2006
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|297465095|ref|XP_002703657.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 1951
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 682 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 741
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|74004464|ref|XP_535939.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Canis lupus familiaris]
Length = 2006
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|380792815|gb|AFE68283.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 970
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
>gi|359063044|ref|XP_003585788.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2022
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 753 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 812
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 813 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 868
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 869 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 924
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1217 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1276
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1277 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1332
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1333 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1382
>gi|358410896|ref|XP_003581865.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2022
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 753 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 812
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 813 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 868
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 869 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 924
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1217 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1276
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1277 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1332
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1333 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1382
>gi|344268036|ref|XP_003405870.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Loxodonta africana]
Length = 1957
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSN 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|311272552|ref|XP_003133492.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Sus scrofa]
Length = 2006
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWIAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|297471676|ref|XP_002685381.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 4
[Bos taurus]
gi|296490598|tpg|DAA32711.1| TPA: sodium channel, voltage-gated, type III, alpha subunit isoform
4 [Bos taurus]
Length = 1951
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 682 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 741
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|158260335|dbj|BAF82345.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
>gi|354478625|ref|XP_003501515.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 1957
Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|291391651|ref|XP_002712287.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 1 [Oryctolagus cuniculus]
Length = 2006
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|344268032|ref|XP_003405868.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 1
[Loxodonta africana]
Length = 2006
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSN 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|301783113|ref|XP_002926972.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 2006
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNP+R++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPLRKIAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|338715746|ref|XP_003363321.1| PREDICTED: sodium channel protein type 9 subunit alpha [Equus
caballus]
Length = 1975
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT +D
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFVVIVFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1168 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYVFILE 1227
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1228 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1283
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1284 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1333
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 703 YRFAHTFLIWNCSPYWIKFKKLIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|291391655|ref|XP_002712289.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 3 [Oryctolagus cuniculus]
Length = 1957
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|345797047|ref|XP_858480.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 14
[Canis lupus familiaris]
Length = 1957
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|380792755|gb|AFE68253.1| sodium channel protein type 2 subunit alpha isoform 1, partial
[Macaca mulatta]
Length = 970
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 790 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
>gi|335302918|ref|XP_003359592.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Sus
scrofa]
Length = 1957
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWIAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|359063040|ref|XP_003585787.1| PREDICTED: sodium channel protein type 3 subunit alpha [Bos taurus]
Length = 2013
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 744 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 803
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 804 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 859
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 860 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 915
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1208 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1267
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1268 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1323
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1324 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1373
>gi|443693804|gb|ELT95078.1| hypothetical protein CAPTEDRAFT_210954 [Capitella teleta]
Length = 1690
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 148/182 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVV++ K FRFSAT+ L+ L PFNP+RR A+Y+L HPLFSLF++ ILTNC+ M M
Sbjct: 118 TFVVVARDKTQFRFSATNGLFCLSPFNPLRRTAVYVLTHPLFSLFVMVIILTNCVFMAMS 177
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
+ + IFT +YTFE VK++ARGFIL+ FTYLRDAWNWLDF+V+ LAY+ M L
Sbjct: 178 RPCKLFAHREIFTAMYTFEVLVKILARGFILKPFTYLRDAWNWLDFVVVTLAYIQMAFPL 237
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
GNLAALRTFRVLRALKTVA+VPGLKTIVGA++E+V+ LRDV+IL++F L++FAL+GLQ
Sbjct: 238 GNLAALRTFRVLRALKTVAVVPGLKTIVGALMEAVRRLRDVMILSVFVLAIFALVGLQIY 297
Query: 181 RG 182
+G
Sbjct: 298 QG 299
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 20/164 (12%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFES 80
R ++ LV H F FII I + I + + PT+ + +FT I+ FE
Sbjct: 966 RCKMFKLVEHKYFETFIIVMICASSIALAIEDVHLQERPTLIDVLYYCDKVFTVIFVFEM 1025
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K A GF Y D W WLDF+++A++ +++G D+G ALRT R LR
Sbjct: 1026 LIKWCAYGFK----KYFTDVWCWLDFVIVAISLISLGAEGAGMGDIGAFRALRTLRALRP 1081
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ V+ G+K +V A+I+++ ++ V+++ + +FA+MG+Q
Sbjct: 1082 LRAVSRWEGMKVVVNALIQAIPSIFHVLLVCLVFWLIFAIMGVQ 1125
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 43 SLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFT 95
LFI IL N + M M TE IFT I+T E+ +K++A L
Sbjct: 556 DLFITLCILINTLFMGMDRPGMDAQTEDMLTYGNYIFTTIFTAEAVLKIIA----LSLLE 611
Query: 96 YLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
YL+D WN D +++ L+ V +G++ + L+ LR+FR+LR K P L ++G + +
Sbjct: 612 YLKDKWNCFDVVIVILSLVELGLENVKGLSILRSFRLLRVFKLAKSWPTLNLLIGIIGRT 671
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+ L ++ + + +FA+MG+Q
Sbjct: 672 LGALGNLCFVLAIIVFIFAVMGMQ 695
>gi|149022133|gb|EDL79027.1| rCG26977, isoform CRA_b [Rattus norvegicus]
Length = 1347
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI---ALAYVTMGIDLGNLAALRTFR 130
+K +A GF + Y +AW WLDF+++ AL + ++ D G R+ R
Sbjct: 1257 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSALWFPSLFCDSG--CCKRSLR 1304
>gi|349119|gb|AAA16202.1| sodium channel [Doryteuthis opalescens]
Length = 1784
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 151/182 (82%), Gaps = 1/182 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF V+ + + ++RFSAT A+++L PFNPIRR AI+ILVHP+FSL +I TI+ NC+ M M
Sbjct: 93 TFCVIGRDRTLYRFSATKAIFLLSPFNPIRRFAIFILVHPIFSLVVILTIVCNCVFMTMK 152
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P + +E IFTGIYT E+ +K+ ARGFILE FTYLRDAWNWLDF+VI LAY+T +DL
Sbjct: 153 ENP-LPVSEWIFTGIYTCEALIKLFARGFILEPFTYLRDAWNWLDFVVIGLAYLTEVVDL 211
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
GNL+ALRTFRVLRALKTVA++PGLKTIVGA++E+V+ LRDV+ILT F LS+FAL+G+Q
Sbjct: 212 GNLSALRTFRVLRALKTVAVIPGLKTIVGALLEAVRRLRDVMILTGFMLSIFALIGMQLY 271
Query: 181 RG 182
+G
Sbjct: 272 QG 273
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 30/189 (15%)
Query: 14 FSATD---ALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPG-----TPT 64
F TD A W L R +Y +V H F FIIT IL + + + + P
Sbjct: 1000 FQHTDFGKAWWKL-------RCFMYKVVEHEYFETFIITMILASSLALALEDIHLRKKPI 1052
Query: 65 IE----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG--- 117
++ + FT I+ E +K A G+ Y DAW WLDF+++A++ + +
Sbjct: 1053 LQLVLKYMDKCFTVIFIGEMFIKWFAFGWK----KYFTDAWCWLDFLIVAVSIIMLAAES 1108
Query: 118 IDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
I +GNL A +RT R LR L+ V+ G++ +V A+I++V ++ +V+++ + +F++
Sbjct: 1109 IGMGNLTAFRSMRTLRALRPLRAVSRSEGMRVVVNALIKAVPSIFNVLLVCLVFWLIFSI 1168
Query: 175 MGLQDSRGK 183
MG+Q GK
Sbjct: 1169 MGVQLFNGK 1177
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYT 77
PF +R + ++ LFI I+ N + M + E V +FT ++
Sbjct: 577 PFKTLRGYIGFFIMDAFVDLFITLCIVLNTVFMAIDHYDMQEGLRVALEIGNYVFTAVFA 636
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALK 136
E+ +K++A L TY +D WN D ++ L+ + +G+ + L+ LR+FR+LR K
Sbjct: 637 AEAFLKILA----LAPQTYFKDPWNVFDSFIVFLSLMELGLGGIQGLSVLRSFRLLRVFK 692
Query: 137 TVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L +IV + ++ NL V+ + +F +FA+MG Q
Sbjct: 693 LAKSWPTLNMLISIVAGTMGALGNLTLVLGIIVF---IFAVMGQQ 734
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMAR 87
++ + F + I+ IL N I M M + E ++F GI+T E +K+M
Sbjct: 1339 HLTTNQKFDVAIMMVILLNMITMAMEHYNMSRTFEDFLKYINMVFIGIFTGECVMKLMGL 1398
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
F Y ++ WN DF+V+ L+ +GI L ++
Sbjct: 1399 -----RFYYFKEPWNIFDFVVVVLS--ILGIALSDI 1427
>gi|395844945|ref|XP_003795208.1| PREDICTED: sodium channel protein type 2 subunit alpha [Otolemur
garnettii]
Length = 338
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKIAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
>gi|338715741|ref|XP_003363319.1| PREDICTED: sodium channel protein type 9 subunit alpha [Equus
caballus]
Length = 1999
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 85 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 144
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT +D
Sbjct: 145 NPPDWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFVVIVFAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 263
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1192 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYVFILE 1251
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1252 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1307
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1308 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1357
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 727 YRFAHTFLIWNCSPYWIKFKKLIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 786
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 787 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 842
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 843 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 898
>gi|345328157|ref|XP_001513457.2| PREDICTED: sodium channel protein type 3 subunit alpha
[Ornithorhynchus anatinus]
Length = 1950
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNRGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++
Sbjct: 150 NPPEWTKNVEYTFTGIYTFESLIKILARGFCLEEFTFLRDPWNWLDFSVILMAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 97/176 (55%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPT--- 64
+RF+ T +W +P+ ++ + I++ P L I I+ N + M M P TP
Sbjct: 732 YRFANTFLIWDCWEPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFSN 791
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ + ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLSAGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1201 LRKTCYGIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1260
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1261 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1316
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1317 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1366
>gi|301783117|ref|XP_002926974.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
4 [Ailuropoda melanoleuca]
Length = 1957
Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNP+R++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPLRKIAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|354487344|ref|XP_003505833.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Cricetulus griseus]
Length = 1974
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFIVIVFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1167 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1226
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1227 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1282
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1283 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1332
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 704 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+IFTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLAVGNLIFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|194389370|dbj|BAG61646.1| unnamed protein product [Homo sapiens]
Length = 516
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++A ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIATKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
>gi|2665784|gb|AAC29515.1| voltage-gated sodium channel, subtype III [Homo sapiens]
Length = 1366
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ RGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILVRGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW LDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCRLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|410035831|ref|XP_003309333.2| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Pan troglodytes]
Length = 2010
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 92 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT +D
Sbjct: 152 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 270
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1203 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1262
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1263 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1318
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1319 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1368
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 733 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 792
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 793 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 848
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 849 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 904
>gi|354478615|ref|XP_003501510.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 2001
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 732 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|354478611|ref|XP_003501508.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 2000
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|441648954|ref|XP_003266243.2| PREDICTED: sodium channel protein type 9 subunit alpha [Nomascus
leucogenys]
Length = 2001
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT +D
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT ++ E
Sbjct: 1194 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYVFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1254 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 728 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 788 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 40/216 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIYILV-HPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ LV + F + I+ I N
Sbjct: 1482 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLN 1541
Query: 54 CI-LMIMPGTPTIESTEV------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + TEV +F ++T E +K+++ L + Y WN DF
Sbjct: 1542 MITMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLIS----LRHY-YFTVGWNIFDF 1596
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ ++ V G+ L +L +R R+ R L+ V G++T++ A++ S+
Sbjct: 1597 VVVIISIV--GMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSL 1654
Query: 156 KNLRDVIILTMFSLSVFALMGLQD-SRGKKSDESHD 190
L ++ +L + ++A+ G+ + + KK D +D
Sbjct: 1655 PALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGIND 1690
>gi|402888523|ref|XP_003907608.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 2
subunit alpha [Papio anubis]
Length = 1925
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 18 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 77
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 78 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 137
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 138 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 196
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 657 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 716
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 717 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 772
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 773 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 828
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1124 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1183
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1184 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1239
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1240 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1289
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIM 59
G+DIF ++A L P PI R A I +F + I+ I N + +M+
Sbjct: 1412 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPATIIKCSVVFDISIMILICLNMVTMMVE 1471
Query: 60 PGTPTIESTEV------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
+ E T + +F ++T E +K+++ + Y WN DF+V+ L+
Sbjct: 1472 TDDQSQEMTNILYWINLVFIVLFTGECVLKLISL-----RYYYFTIGWNIFDFVVVILSI 1526
Query: 114 VTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
V G+ L L +R R+ R L+ + G++T++ A++ S+ L ++
Sbjct: 1527 V--GMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIG 1584
Query: 163 ILTMFSLSVFALMGLQD 179
+L + ++A+ G+ +
Sbjct: 1585 LLLFLVMFIYAIFGMSN 1601
>gi|354478617|ref|XP_003501511.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
5 [Cricetulus griseus]
Length = 1951
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|334330211|ref|XP_003341318.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Monodelphis domestica]
Length = 1978
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFN IRR++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKTIFRFSATPALYILTPFNLIRRISIKILVHSLFSMLIMCTILTNCIFMTLS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 147 SPPDWTKNVEYTFTGIYTFESLVKILARGFCIGPFTFLRDPWNWLDFIVICFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALIGLQ 265
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1171 IRKTCYRIVEHNWFESFIVLMILLSSGALAFEDIYIEQRKTIKTVLEYADKIFTYVFILE 1230
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A G+ + Y +AW WLDF++ I L T+G DLG + +LRT R LR
Sbjct: 1231 MLLKWVAYGYKV----YFTNAWCWLDFLIVDVSIITLVASTLGYSDLGPIKSLRTLRALR 1286
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1287 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1336
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P + ++ I++ P L I I+ N + M M P E
Sbjct: 705 YKFANTFLIWNCSPRWLKFKKFIHLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEGFKN 764
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 765 MLTVGNLVFTGIFAAEMVLKIIA----MDPYEYFQVGWNIFDSVIVTLSLVELFLADVEG 820
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 821 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 876
>gi|403258879|ref|XP_003921969.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Saimiri boliviensis boliviensis]
Length = 2005
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|395732433|ref|XP_002812596.2| PREDICTED: sodium channel protein type 9 subunit alpha [Pongo
abelii]
Length = 2056
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT +D
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1194 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1254 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 728 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 787
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 788 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
>gi|25014054|sp|Q9NY46.2|SCN3A_HUMAN RecName: Full=Sodium channel protein type 3 subunit alpha; AltName:
Full=Sodium channel protein brain III subunit alpha;
AltName: Full=Sodium channel protein type III subunit
alpha; AltName: Full=Voltage-gated sodium channel
subtype III; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.3
Length = 2000
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|93141214|ref|NP_001035233.1| sodium channel protein type 2 subunit alpha isoform 2 [Homo
sapiens]
gi|12382816|gb|AAG53412.1| voltage-gated sodium channel type II alpha subunit [Homo sapiens]
Length = 2005
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|390464444|ref|XP_003733222.1| PREDICTED: sodium channel protein type 2 subunit alpha [Callithrix
jacchus]
Length = 2005
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|441648965|ref|XP_003266235.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 2
subunit alpha [Nomascus leucogenys]
Length = 2005
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 17/178 (9%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN- 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ M +DL N
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSL--MELDLANV 843
Query: 123 --LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L +LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 EGLPSLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|397500548|ref|XP_003820972.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Pan paniscus]
Length = 2005
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|291391645|ref|XP_002712283.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 2
[Oryctolagus cuniculus]
Length = 2000
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++R+ I++ P L I I+ N + M M P +
Sbjct: 731 YRFANVFLIWDCCEAWLKVKRLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLAVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|426337560|ref|XP_004032770.1| PREDICTED: sodium channel protein type 2 subunit alpha [Gorilla
gorilla gorilla]
Length = 2014
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|114581485|ref|XP_001153227.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Pan troglodytes]
Length = 2005
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|348585917|ref|XP_003478717.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
4 [Cavia porcellus]
Length = 2000
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++ + I++ P L I I+ N + M M P +
Sbjct: 731 YRFANVFLIWDCCEAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|126362955|ref|NP_001075146.1| sodium channel protein type 3 subunit alpha isoform 3 [Homo
sapiens]
gi|7414320|emb|CAB85895.1| type III sodium channel protein [Homo sapiens]
gi|12382857|gb|AAG53414.1| voltage-gated sodium channel type III alpha subunit [Homo sapiens]
Length = 1951
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|338715732|ref|XP_003363317.1| PREDICTED: sodium channel protein type 2 subunit alpha [Equus
caballus]
Length = 2006
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|149022132|gb|EDL79026.1| rCG26977, isoform CRA_a [Rattus norvegicus]
Length = 2005
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|432926596|ref|XP_004080906.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oryzias latipes]
Length = 2043
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V++KGK IFRFSAT AL++ PF+PIRR+AI ILVH LFSLFI+ TILTNC M M
Sbjct: 150 TFIVLNKGKAIFRFSATSALYIFSPFHPIRRLAIKILVHSLFSLFIMCTILTNCCFMAMS 209
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP + E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT +D
Sbjct: 210 EPTPWAKYLEYTFTGIYTFESLIKILARGFCVGPFTFLRDPWNWLDFSVIVMAYVTEFVD 269
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I++VK L DV+ILT+F LSVFAL+GLQ
Sbjct: 270 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQAVKKLADVMILTVFCLSVFALIGLQ 328
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 18/161 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESA 81
++++ ++ P L I I+ N + M M P E ++F+GI+T E
Sbjct: 768 LKQLVKIMVTDPFLDLAITVCIVLNTLFMAMEHYPMTEEFNGMLTIGNLVFSGIFTAEMV 827
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+KV+A L+ + Y + WN D I++ L+ + +G+ D+ L+ LR+FR+LR K
Sbjct: 828 LKVIA----LDPYYYFQTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARS 883
Query: 141 VPGLKT---IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T I+G I ++ NL V+ + +F +FA++G+Q
Sbjct: 884 WPTLNTLIKIIGNSIGALGNLTLVLAIIVF---IFAVVGMQ 921
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1203 LRKTCFQIVEHSWFESFIIFMILLSSGALAFEDIYIEQRRMVKVVLEFADKIFTYIFILE 1262
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y + W WLDF ++ ++ V++ D + +LRT R LR
Sbjct: 1263 MILKWLAYGFK----KYFTNYWCWLDFFIVDVSLVSLAANMLGYSDFAAIKSLRTLRALR 1318
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1319 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1368
>gi|150010574|ref|NP_001092768.1| sodium channel, voltage-gated, type II, alpha 1 [Mus musculus]
Length = 2006
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|149730669|ref|XP_001495738.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 5
[Equus caballus]
Length = 1957
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|395732415|ref|XP_002812578.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 3
subunit alpha [Pongo abelii]
Length = 1993
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ T LTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYLLTPLNPVRKIAIKILVHSLFSMLIMCTXLTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|24371298|ref|NP_571703.1| sodium channel, voltage-gated, type VIII, alpha a [Danio rerio]
gi|10505341|gb|AAG18440.1|AF297658_1 sodium channel protein Scn8a [Danio rerio]
Length = 1949
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL+++ PFN RR+AI IL+H +FS+FI+ TILTNC+ M
Sbjct: 93 TFVVLNKGKTIFRFSATPALYMISPFNLARRIAIKILIHSVFSMFIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFESAVK++ARGF ++ FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESAVKIIARGFCIDGFTFLRDPWNWLDFMVISMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 693 YKFANTFLIWECGPLWMSIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFEH 752
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 753 VLSVGNLVFTGIFTAEMFAKLVA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 808
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 809 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 864
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E +++FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 1201 LEYADMVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLIANALGYS 1256
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1257 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1316
Query: 179 DSRGK 183
GK
Sbjct: 1317 MFAGK 1321
>gi|354487625|ref|XP_003505972.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 2019
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+FI+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMFIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQRYLIWECCPLWMSIKQKVKFLVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERQTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|114581475|ref|XP_001152817.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 10
[Pan troglodytes]
gi|397500552|ref|XP_003820974.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 2
[Pan paniscus]
Length = 1951
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|109099890|ref|XP_001099196.1| PREDICTED: sodium channel protein type 3 subunit alpha isoform 3
[Macaca mulatta]
Length = 1951
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|354487631|ref|XP_003505975.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
5 [Cricetulus griseus]
Length = 2001
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+FI+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMFIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQRYLIWECCPLWMSIKQKVKFLVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERQTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|354478633|ref|XP_003501519.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
7 [Cricetulus griseus]
Length = 1965
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A GF + Y +AW WLDF+++
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIV 1283
>gi|348585915|ref|XP_003478716.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
3 [Cavia porcellus]
Length = 1950
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 148 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++ + I++ P L I I+ N + M M P +
Sbjct: 681 YRFANVFLIWDCCEAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 740
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 741 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 796
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 797 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 852
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1145 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1204
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1205 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1260
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1261 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1310
>gi|291391649|ref|XP_002712285.1| PREDICTED: sodium channel, voltage-gated, type III, alpha isoform 4
[Oryctolagus cuniculus]
Length = 1951
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W + + ++R+ I++ P L I I+ N + M M P +
Sbjct: 682 YRFANVFLIWDCCEAWLKVKRLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTDQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLAVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIRSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|410899316|ref|XP_003963143.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Takifugu rubripes]
Length = 1956
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL+ + PFNP+RRVAI IL+H LFS+ I+ TILTNCI M
Sbjct: 94 TFIVLNRGKTIFRFSATPALYFISPFNPVRRVAIKILIHSLFSMIIMCTILTNCIFMTFS 153
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK+ ARGF +++FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 154 DPPEWSKQVEYTFTGIYTFESLVKITARGFCIDNFTFLRDPWNWLDFMVISMAYITEFVD 213
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 214 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 272
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 695 YKFANTFLIWECSPTWIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEH 754
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++AWN D ++ L+ V + + D+
Sbjct: 755 MLSVGNLVFTGIFAGEMLFKLVA----MDPYYYFQEAWNCFDGFIVTLSLVELALADVEG 810
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 811 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 866
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 1204 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLVANALGYS 1259
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1260 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1319
Query: 179 DSRGK 183
GK
Sbjct: 1320 LFAGK 1324
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TE IF ++T
Sbjct: 1479 PQNKIQGMVFDFVTQQVFDISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFT 1538
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1539 TEFLLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1591
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1592 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1642
>gi|119631739|gb|EAX11334.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_d [Homo
sapiens]
Length = 1472
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|410968763|ref|XP_003990869.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Felis catus]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|354487633|ref|XP_003505976.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
6 [Cricetulus griseus]
Length = 1986
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+FI+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMFIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQRYLIWECCPLWMSIKQKVKFLVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERQTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|187957230|gb|AAI58049.1| Scn9a protein [Mus musculus]
Length = 1973
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AYVT +D
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1168 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1227
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1228 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1283
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1284 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1333
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 703 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|74004462|ref|XP_858637.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 17
[Canis lupus familiaris]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|426220983|ref|XP_004004691.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Ovis aries]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|354478623|ref|XP_003501514.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Cricetulus griseus]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|426220985|ref|XP_004004692.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Ovis aries]
Length = 1957
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|354478629|ref|XP_003501517.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
5 [Cricetulus griseus]
Length = 1957
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|344268038|ref|XP_003405871.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Loxodonta africana]
Length = 1957
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSN 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|311272550|ref|XP_003133493.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
2 [Sus scrofa]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWIAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|410968765|ref|XP_003990870.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 3
[Felis catus]
Length = 1957
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|354487627|ref|XP_003505973.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
3 [Cricetulus griseus]
Length = 1965
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+FI+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMFIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQRYLIWECCPLWMSIKQKVKFLVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1143 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERQTIKVLLEYADKMFTYVFVLE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1203 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1308
>gi|291391657|ref|XP_002712290.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 4 [Oryctolagus cuniculus]
Length = 1957
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|344268034|ref|XP_003405869.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 2
[Loxodonta africana]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSN 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 VRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|291391653|ref|XP_002712288.1| PREDICTED: sodium channel, voltage-gated, type II, alpha
subunit-like isoform 2 [Oryctolagus cuniculus]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|345797049|ref|XP_858448.2| PREDICTED: sodium channel protein type 2 subunit alpha isoform 13
[Canis lupus familiaris]
Length = 1957
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|301783111|ref|XP_002926971.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 2006
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNP+R++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPLRKIAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|410899320|ref|XP_003963145.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Takifugu rubripes]
Length = 1742
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL+ + PFNP+RRVAI IL+H LFS+ I+ TILTNCI M
Sbjct: 94 TFIVLNRGKTIFRFSATPALYFISPFNPVRRVAIKILIHSLFSMIIMCTILTNCIFMTFS 153
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK+ ARGF +++FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 154 DPPEWSKQVEYTFTGIYTFESLVKITARGFCIDNFTFLRDPWNWLDFMVISMAYITEFVD 213
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 214 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 272
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 478 YKFANTFLIWECSPTWIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEH 537
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++AWN D ++ L+ V + + D+
Sbjct: 538 MLSVGNLVFTGIFAGEMLFKLVA----MDPYYYFQEAWNCFDGFIVTLSLVELALADVEG 593
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 594 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 649
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 990 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLVANALGYS 1045
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1046 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1105
Query: 179 DSRGK 183
GK
Sbjct: 1106 LFAGK 1110
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TE IF ++T
Sbjct: 1265 PQNKIQGMVFDFVTQQVFDISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFT 1324
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1325 TEFLLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1377
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1378 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1428
>gi|335302920|ref|XP_003359593.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Sus
scrofa]
Length = 1957
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWIAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|395517038|ref|XP_003762689.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Sarcophilus harrisii]
Length = 1761
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+FI+ TILTNC+ M
Sbjct: 90 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMFIMCTILTNCVFMAQH 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 150 EPPPWTKYVEYTFTAIYTFESLVKILARGFCLNAFTFLRDPWNWLDFSVIVMAYVSENIK 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 210 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 268
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST 68
RF+ +W P + I++ ++++ P L I I+ N + M + TP E
Sbjct: 687 RFAQNYLIWECCPLWLAIKKNVKFVVMDPFTDLTITICIVLNTLFMALEHYNMTPDFEEM 746
Query: 69 ----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 747 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 802
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 803 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 857
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT I+ E
Sbjct: 1190 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYIFVLE 1249
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1250 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1305
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1306 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1355
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 18/121 (14%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL------ 123
++F GI+T E +KV+A L + Y ++WN DF+V+ L+ V G L ++
Sbjct: 1561 LLFVGIFTGECVIKVIA----LRHY-YFTNSWNIFDFVVVILSIV--GTVLSDIIQKYFF 1613
Query: 124 -----AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+R R+ R L+ + G+ T++ A++ S+ L ++ +L + ++++ G+
Sbjct: 1614 SPTLFRVIRLARIGRILRLIRGAKGISTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMA 1673
Query: 179 D 179
+
Sbjct: 1674 N 1674
>gi|395844926|ref|XP_003795199.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 3
[Otolemur garnettii]
Length = 1976
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL+++ PFNP+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMISPFNPLRRLSIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1169 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1228
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1229 LLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANALGYSDLGPIKSLRTLRALR 1284
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1285 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1334
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P + E
Sbjct: 704 YRFAHTFLIWNCSPYWIKFKKFIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTKEFEN 763
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + D+
Sbjct: 764 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVEFFLSDVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ + F + I+ I N
Sbjct: 1457 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDIVTNQAFDITIMVLICLN 1516
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1517 MVTMMVEKEDQSDEMTNVLYWINVVFITLFTGECVLKLIS----LRHY-YFTVGWNIFDF 1571
Query: 107 IVIALAYVTM---GIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESVKN 157
+V+ L++V M G+ + FRV+R L+ + G++T++ A++ S+
Sbjct: 1572 VVVILSFVGMFLAGLIKKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPA 1631
Query: 158 LRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1632 LFNIGLLLFLVMFIYAIFGMSN 1653
>gi|301783115|ref|XP_002926973.1| PREDICTED: sodium channel protein type 2 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1957
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNP+R++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPLRKIAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 682 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 742 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1149 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1208
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1209 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1264
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
>gi|449492116|ref|XP_002186910.2| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Taeniopygia guttata]
Length = 1883
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+PIRR AI ILVH LFS+FI+ TILTNC+ M
Sbjct: 90 TFIVLNKGKTIFRFSATPALYILSPFHPIRRAAIKILVHSLFSMFIMCTILTNCVFMAQS 149
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ETPSWNKYVEYTFTGIYTFESLIKILARGFCMTEFTFLRDPWNWLDFSVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 20 LWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIF 72
LW+L I++ ++++ P L I I+ N + M + + E ++F
Sbjct: 708 LWLL-----IKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFEHMLYIGNLVF 762
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRV 131
TGI+T E KV+A L+ + Y + WN D I++ L+ + +G+ +GNL+ LR+FR+
Sbjct: 763 TGIFTAEMIFKVIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRL 818
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 865
>gi|426220963|ref|XP_004004681.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 3
[Ovis aries]
Length = 1976
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH FS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHAAFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +D
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYVTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1169 IRKTCFRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1228
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1229 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1284
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1285 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1334
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 703 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|326921486|ref|XP_003206990.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Meleagris gallopavo]
Length = 1959
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L PF+P+RR AI ILVH LFS+FI+ TILTNC+ M
Sbjct: 90 TFVVLNKGKTIFRFSATPALYILSPFHPVRRAAIKILVHSLFSMFIMCTILTNCVFMAQS 149
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ETPSWNKYVEYTFTGIYTFESLIKILARGFCMTEFTFLRDPWNWLDFSVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++ ++++ P L I I+ N + M + + + ++FTGI+T E
Sbjct: 715 IKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFDHMLYIGNLVFTGIFTAEMI 774
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
KV+A L+ + Y + WN D I++ L+ + +G+ +GNL+ LR+FR+LR K
Sbjct: 775 FKVIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKS 830
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1138 LRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLEYADKIFTYIFVLE 1197
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1198 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALR 1253
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1254 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1303
>gi|327275592|ref|XP_003222557.1| PREDICTED: sodium channel protein type 4 subunit alpha-like [Anolis
carolinensis]
Length = 1871
Score = 242 bits (618), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T++++SKGK IFRFS T AL++LDPFN +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 89 TYILLSKGKTIFRFSTTPALYMLDPFNIVRRGAIQVLIHSLFSMFIMITILTNCVFMAMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ ++ E FTGIYTFES +K++ARGF ++SFT+LRD WNWLDF VI +AY+T +D
Sbjct: 149 NPPSWAKNVEYTFTGIYTFESTIKILARGFCVDSFTFLRDPWNWLDFSVIVMAYLTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLAVFALIGLQ 267
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W PF ++ + I++ P L I I+ N + M M P E
Sbjct: 576 YKFANAVLVWNCCPFWVKLKHILKLIVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 635
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V + + ++
Sbjct: 636 VLTVGNLVFTGIFTAEMVLKLIA----LDPYEYFQVGWNIFDSIIVTLSLVELALANVQG 691
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 692 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 747
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + P TI E + +F+ ++ E
Sbjct: 1037 LRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRPVIRTILEYADKVFSYVFVIE 1096
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ ++ MG +LG + +LRT R LR
Sbjct: 1097 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWMGYSELGPIKSLRTLRALR 1152
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1153 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1202
>gi|359500285|gb|AEV53348.1| NaV1.7, partial [Heterocephalus glaber]
Length = 1884
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 67 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 126
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AYVT ++
Sbjct: 127 SPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFVN 186
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 187 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 245
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1161 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1220
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1221 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSVVTLVASTLGYSDLGPIKSLRTLRALR 1276
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1277 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1326
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 19/179 (10%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P T+E
Sbjct: 695 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTLEFKN 754
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGN 122
V +FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + +
Sbjct: 755 VLSVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLSHVEG 810
Query: 123 LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L I+G + ++ NL V+ + +F +FA++G+Q
Sbjct: 811 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSMGALGNLTLVLAIIVF---IFAVVGMQ 866
>gi|301783103|ref|XP_002926967.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1952
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 149/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVL-DPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 148
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 DLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 683 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 742
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 743 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 798
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 799 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 854
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|338715743|ref|XP_003363320.1| PREDICTED: sodium channel protein type 9 subunit alpha [Equus
caballus]
Length = 1986
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYVFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKLIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|301783099|ref|XP_002926965.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 2001
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 149/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVL-DPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 148
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 DLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 732 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 791
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|297264211|ref|XP_001101662.2| PREDICTED: sodium channel protein type 9 subunit alpha [Macaca
mulatta]
Length = 1977
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1170 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1230 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 704 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIYILV-HPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ LV + F + I+ I N
Sbjct: 1458 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLN 1517
Query: 54 CILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T + V+F ++T E +K+++ + Y WN DF
Sbjct: 1518 MVTMMVEKEGQSPYMTDVLYWINVVFIILFTGECVLKLISL-----RYYYFTIGWNIFDF 1572
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ ++ V G+ L +L +R R+ R L+ V G++T++ A++ S+
Sbjct: 1573 VVVIISIV--GMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSL 1630
Query: 156 KNLRDVIILTMFSLSVFALMGLQD-SRGKKSDESHD 190
L ++ +L + ++A+ G+ + + KK D +D
Sbjct: 1631 PALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGIND 1666
>gi|149730681|ref|XP_001496473.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Equus caballus]
Length = 1975
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCIGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1168 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYVFILE 1227
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1228 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1283
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1284 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1333
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 703 YRFAHTFLIWNCSPYWIKFKKLIHFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|224960|prf||1204264B Na channel II protein
Length = 2005
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LR+ WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRNPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|6981506|ref|NP_036779.1| sodium channel protein type 2 subunit alpha [Rattus norvegicus]
gi|116448|sp|P04775.1|SCN2A_RAT RecName: Full=Sodium channel protein type 2 subunit alpha; AltName:
Full=Sodium channel protein brain II subunit alpha;
AltName: Full=Sodium channel protein type II subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.2
gi|57215|emb|CAA27287.1| unnamed protein product [Rattus norvegicus]
Length = 2005
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LR+ WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRNPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|402860603|ref|XP_003894715.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Papio anubis]
Length = 1984
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|402860601|ref|XP_003894714.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Papio anubis]
Length = 1999
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1195 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1255 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|62822245|gb|AAY14794.1| unknown [Homo sapiens]
Length = 1146
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 704 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|410899318|ref|XP_003963144.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Takifugu rubripes]
Length = 1959
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL+ + PFNP+RRVAI IL+H LFS+ I+ TILTNCI M
Sbjct: 94 TFIVLNRGKTIFRFSATPALYFISPFNPVRRVAIKILIHSLFSMIIMCTILTNCIFMTFS 153
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK+ ARGF +++FT+LRD WNWLDF+VI++AY+T ++
Sbjct: 154 DPPEWSKQVEYTFTGIYTFESLVKITARGFCIDNFTFLRDPWNWLDFMVISMAYITEFVN 213
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 214 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 272
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 695 YKFANTFLIWECSPTWIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEH 754
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++AWN D ++ L+ V + + D+
Sbjct: 755 MLSVGNLVFTGIFAGEMLFKLVA----MDPYYYFQEAWNCFDGFIVTLSLVELALADVEG 810
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 811 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 866
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 1207 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLVANALGYS 1262
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1263 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1322
Query: 179 DSRGK 183
GK
Sbjct: 1323 LFAGK 1327
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TE IF ++T
Sbjct: 1482 PQNKIQGMVFDFVTQQVFDISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFT 1541
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1542 TEFLLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1594
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1595 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1645
>gi|402888535|ref|XP_003907613.1| PREDICTED: sodium channel protein type 9 subunit alpha [Papio
anubis]
Length = 1985
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1178 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1238 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1343
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 712 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 771
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 772 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 827
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 828 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 883
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 40/216 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIYILV-HPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ LV + F + I+ I N
Sbjct: 1466 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLN 1525
Query: 54 CILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T + V+F ++T E +K+++ + Y WN DF
Sbjct: 1526 MVTMMVEKEGQSLYMTDVLYWINVVFIILFTGECVLKLISL-----RYYYFTIGWNIFDF 1580
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ ++ V G+ L +L +R R+ R L+ V G++T++ A++ S+
Sbjct: 1581 VVVIISIV--GMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSL 1638
Query: 156 KNLRDVIILTMFSLSVFALMGLQD-SRGKKSDESHD 190
L ++ +L + ++A+ G+ + + KK D +D
Sbjct: 1639 PALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGIND 1674
>gi|355746804|gb|EHH51418.1| hypothetical protein EGM_10784 [Macaca fascicularis]
Length = 2017
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1195 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1255 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFADLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|402860597|ref|XP_003894712.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Papio anubis]
Length = 2017
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1195 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1255 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|301605808|ref|XP_002932534.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like [Xenopus (Silurana) tropicalis]
Length = 1827
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL+++ PF+PIRR +I ILVH LFS+FI+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKTIFRFSATPALYIISPFHPIRRASIKILVHSLFSMFIMCTILTNCVFMAMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
+ ++ E FTGIYTFES +K++ARGF L+ FT+LRD WNWLDF VI +AY T +D
Sbjct: 151 DSSAWLKYVEYTFTGIYTFESMIKILARGFCLKPFTFLRDPWNWLDFSVIVMAYATEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SV+ L DV+ILT+F LSVFAL GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVRKLADVMILTVFCLSVFALTGLQ 269
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMAR 87
++++ P L I I+ N + M + TP E +FTGI+T E K++A
Sbjct: 717 FVVMDPFIDLTITICIVLNTLFMALEHYKMTPEFEYMLSVGNYVFTGIFTAEMVFKIIA- 775
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKT 146
L+ + Y + WN D I++ L+ + + + +GNL+ LR+FR+LR K P L T
Sbjct: 776 ---LDPYYYFQQGWNIFDSIIVCLSLMELCLASMGNLSVLRSFRLLRVFKLAKSWPTLNT 832
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + SV L ++ ++ + +FA++G+Q
Sbjct: 833 LIKIIGNSVGALGNLTLVLAIIVFIFAVVGVQ 864
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 1132 LRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIDQKKVVKTILEYADKVFTYVFVLE 1191
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF ++ ++ +++ G+ +LG + +LRT R LR
Sbjct: 1192 MLLKWVAYGFK----KYFTNAWCWLDFFIVDVSLISLLATPLGLSELGPMKSLRTLRALR 1247
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1248 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1297
>gi|297286126|ref|XP_002808375.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like [Macaca mulatta]
Length = 2003
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1191 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1250
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1251 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1306
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1307 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1356
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 702 IKQGVKLVVMDPFADLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 761
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 762 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 817
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 818 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 855
>gi|2665782|gb|AAC29514.1| voltage-gated sodium channel, subtype III [Homo sapiens]
Length = 1366
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ RGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILVRGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW LDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCRLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>gi|402860599|ref|XP_003894713.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Papio anubis]
Length = 1962
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1140 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1200 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|4506813|ref|NP_002968.1| sodium channel protein type 9 subunit alpha [Homo sapiens]
gi|758110|emb|CAA58042.1| sodium channel alpha subunit [Homo sapiens]
gi|114150659|gb|ABI51981.1| voltage-gated sodium channel Nav1.7 [Homo sapiens]
Length = 1977
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1170 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1230 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 704 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|113676138|ref|NP_001038387.1| sodium channel, voltage gated, type XII, alpha a [Danio rerio]
gi|76786321|gb|ABA54922.1| voltage-gated sodium channel type V alpha subunit Nav1.5La [Danio
rerio]
Length = 1932
Score = 241 bits (616), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+ IRR++I ILVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYIFSPFHCIRRISIRILVHSLFSLFIMCTILTNCCFMAMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES +K++ARGF E FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 DPPLWTKYLEYTFTGIYTFESLIKILARGFCTECFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+ F+ +W P + ++ +++ P L I I+ N + M + P +
Sbjct: 676 YEFAQKYLIWTCSPAWLRVKEGLKVMVMDPFLDLAITICIVLNTLFMALEHYPMTDEFNS 735
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K+ F L+ + Y + WN D I++ L+ + +G+ ++
Sbjct: 736 MLSIGNLVFTGIFTAEMVLKI----FALDPYYYFQQGWNIFDGIIVCLSLMELGLSNVEG 791
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 792 LSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 847
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +F+ I+ E
Sbjct: 1117 LRKTCYQIVEHSWFETFIILMILLSSGALAFEDIYIEQRKVVKVVLEYADKVFSYIFVLE 1176
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y + W WLDF++ I+L ++G D G + +LRT R LR
Sbjct: 1177 MFLKWIAYGFK----KYFTNYWCWLDFLIVDVSLISLVANSLGYSDFGAIKSLRTLRALR 1232
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1233 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1282
>gi|348585905|ref|XP_003478711.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
3 [Cavia porcellus]
Length = 1976
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1169 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKRTIKVILEYADKIFTYIFILE 1228
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1229 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1284
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1285 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1334
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
FRF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 704 FRFARTFLIWNCSPYWIKFKKIIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLSDVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|354487346|ref|XP_003505834.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Cricetulus griseus]
Length = 1974
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1167 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1226
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1227 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1282
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1283 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1332
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 704 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+IFTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLAVGNLIFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|397507781|ref|XP_003824365.1| PREDICTED: sodium channel protein type 9 subunit alpha [Pan
paniscus]
Length = 1977
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1170 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1230 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+R + +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 704 YRLAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|348585901|ref|XP_003478709.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
1 [Cavia porcellus]
Length = 1975
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1168 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKRTIKVILEYADKIFTYIFILE 1227
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1228 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1283
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1284 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1333
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
FRF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 703 FRFARTFLIWNCSPYWIKFKKIIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLSDVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|327478559|sp|Q15858.3|SCN9A_HUMAN RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Neuroendocrine sodium channel; Short=hNE-Na;
AltName: Full=Peripheral sodium channel 1; Short=PN1;
AltName: Full=Sodium channel protein type IX subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.7
Length = 1988
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1181 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1240
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1241 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1296
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1297 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1346
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 715 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 774
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 775 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
>gi|348585903|ref|XP_003478710.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
2 [Cavia porcellus]
Length = 1986
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKRTIKVILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
FRF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 714 FRFARTFLIWNCSPYWIKFKKIIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLSDVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|301786468|ref|XP_002928649.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 1976
Score = 241 bits (616), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1169 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYVFILE 1228
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1229 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1284
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1285 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1334
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E
Sbjct: 703 YRFAHTFLIWNCSPYWIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|354487348|ref|XP_003505835.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 3
[Cricetulus griseus]
Length = 1985
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1178 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1238 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1343
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 715 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 774
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+IFTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 775 VLAVGNLIFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
>gi|301786470|ref|XP_002928650.1| PREDICTED: sodium channel protein type 9 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 1987
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1180 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYVFILE 1239
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1240 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1295
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1296 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1345
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|359323897|ref|XP_003640221.1| PREDICTED: sodium channel protein type 9 subunit alpha-like [Canis
lupus familiaris]
Length = 1975
Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1169 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1228
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1229 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1284
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1285 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1334
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 703 YRFAHTFLIWNCSPYWIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|74206446|dbj|BAE24929.1| unnamed protein product [Mus musculus]
Length = 478
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
>gi|3087876|emb|CAA76659.1| rat skeletal muscle type 1 voltage-gated sodium channel (rSkM1)
variant [Rattus norvegicus]
Length = 1840
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSIIRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
>gi|410968779|ref|XP_003990877.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 9
subunit alpha [Felis catus]
Length = 1979
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1172 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1231
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1232 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1287
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1288 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1337
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P +
Sbjct: 706 YRFAHTFLIWNCSPYWIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 765
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 766 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 821
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 877
>gi|432866205|ref|XP_004070737.1| PREDICTED: sodium channel protein type 8 subunit alpha-like
[Oryzias latipes]
Length = 1902
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL+ + PFNPIR++AI IL+H LFS+ I+ TILTNCI M
Sbjct: 94 TFIVLNRGKTIFRFSATPALYFISPFNPIRQLAIKILIHSLFSMIIMCTILTNCIFMTFS 153
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK+ ARGF ++ FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 154 DPPEWSKQVEYTFTGIYTFESLVKITARGFCIDDFTFLRDPWNWLDFMVISMAYITEFVD 213
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 214 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 272
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 1150 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLVANALGYS 1205
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1206 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1265
Query: 179 DSRGK 183
GK
Sbjct: 1266 MFAGK 1270
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTF 129
+FTGI+ E +K++A ++ + Y ++AWN D ++ L+ V + + D+ L+ LR+F
Sbjct: 708 VFTGIFAGEMFLKLVA----MDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSF 763
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 764 RLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 812
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TE IF ++T
Sbjct: 1425 PQNKIQGMVFDFVTQQVFDISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFT 1484
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1485 TEFLLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1537
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1538 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1588
>gi|84875498|ref|NP_067519.2| sodium channel protein type 5 subunit alpha isoform 1 [Mus
musculus]
gi|74181052|dbj|BAE27800.1| unnamed protein product [Mus musculus]
gi|74184727|dbj|BAE27966.1| unnamed protein product [Mus musculus]
gi|225000576|gb|AAI72643.1| Sodium channel, voltage-gated, type V, alpha [synthetic construct]
Length = 2020
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|441611869|ref|XP_003257315.2| PREDICTED: sodium channel protein type 5 subunit alpha [Nomascus
leucogenys]
Length = 1990
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/178 (66%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 61 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 120
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P T+ FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I L
Sbjct: 121 DPPPW--TKYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIKL 178
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 179 GNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 236
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1152 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVVLEYADKMFTYVFVLE 1211
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1212 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1267
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1268 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1317
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
R + +W P + I++ +++ P L I I+ N + M +
Sbjct: 648 RLAQRYLIWECCPLWTSIKQGVRLVVMDPFADLTITMCIVLNTLFMALEHYNMTSEFEEM 707
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 708 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNL 763
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 764 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 818
>gi|311268687|ref|XP_003132157.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
4 [Sus scrofa]
Length = 1988
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 692 RFAQRYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|125630309|ref|NP_061340.2| sodium channel protein type 9 subunit alpha [Mus musculus]
gi|225000612|gb|AAI72761.1| sodium channel, voltage-gated, type IX, alpha [synthetic construct]
Length = 1975
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1170 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1230 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 705 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 764
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 765 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 820
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 821 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 876
>gi|122066139|sp|Q62205.2|SCN9A_MOUSE RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Peripheral sodium channel 1; Short=PN1; AltName:
Full=Sodium channel protein type IX subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.7
Length = 1984
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|219521476|gb|AAI72147.1| Scn9a protein [Mus musculus]
Length = 1984
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|311268679|ref|XP_003132155.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
2 [Sus scrofa]
Length = 2021
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 692 RFAQRYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1198 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1258 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|348556690|ref|XP_003464154.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Cavia porcellus]
Length = 1982
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 685 RFAKRYLIWECCPLWISIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 744
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 745 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 800
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 801 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 855
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1191 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1250
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1251 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1306
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1307 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1356
>gi|348556686|ref|XP_003464152.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Cavia porcellus]
Length = 1997
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 685 RFAKRYLIWECCPLWISIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 744
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 745 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 800
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 801 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 855
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1192 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1251
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1252 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1307
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1308 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1357
>gi|311268681|ref|XP_003132156.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
3 [Sus scrofa]
Length = 2003
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 692 RFAQRYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1198 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1258 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>gi|125858951|gb|AAI29806.1| Scn4a protein [Mus musculus]
Length = 1840
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKAIFRFSATPALYMLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 151 NPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 269
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 556 PWVKFKHIILLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 615
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 616 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 671
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 672 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 713
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
>gi|6981512|ref|NP_037310.1| sodium channel protein type 4 subunit alpha [Rattus norvegicus]
gi|116453|sp|P15390.1|SCN4A_RAT RecName: Full=Sodium channel protein type 4 subunit alpha; AltName:
Full=Mu-1; AltName: Full=SkM1; AltName: Full=Sodium
channel protein skeletal muscle subunit alpha; AltName:
Full=Sodium channel protein type IV subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4
gi|205652|gb|AAA41682.1| voltage-sensitive sodium channel alpha subunit [Rattus norvegicus]
Length = 1840
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
>gi|395843488|ref|XP_003794513.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Otolemur garnettii]
Length = 1965
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 VGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST 68
RF+ +W P + I++ +++ P L I I+ N + M + T ES
Sbjct: 689 RFAQRYLIWECCPLWLSIKQKVKFLVTDPFADLAITMCIVLNTLFMALEHYNMTAEFESM 748
Query: 69 ----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMNNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 864
Query: 184 KSDESH 189
S++ H
Sbjct: 865 YSEQRH 870
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + T+ E + +FT ++ E
Sbjct: 1142 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEDRKTVKVLLEYADKMFTYVFVLE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1258 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1302
>gi|395843486|ref|XP_003794512.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Otolemur garnettii]
Length = 2019
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 VGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST 68
RF+ +W P + I++ +++ P L I I+ N + M + T ES
Sbjct: 689 RFAQRYLIWECCPLWLSIKQKVKFLVTDPFADLAITMCIVLNTLFMALEHYNMTAEFESM 748
Query: 69 ----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMNNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 864
Query: 184 KSDESH 189
S++ H
Sbjct: 865 YSEQRH 870
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + T+ E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEDRKTVKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1356
>gi|348556684|ref|XP_003464151.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Cavia porcellus]
Length = 2015
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 685 RFAKRYLIWECCPLWISIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 744
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 745 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 800
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 801 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 855
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1192 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1251
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1252 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1307
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1308 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1357
>gi|395843490|ref|XP_003794514.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Otolemur garnettii]
Length = 2001
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 VGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST 68
RF+ +W P + I++ +++ P L I I+ N + M + T ES
Sbjct: 689 RFAQRYLIWECCPLWLSIKQKVKFLVTDPFADLAITMCIVLNTLFMALEHYNMTAEFESM 748
Query: 69 ----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMNNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 864
Query: 184 KSDESH 189
S++ H
Sbjct: 865 YSEQRH 870
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + T+ E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEDRKTVKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1356
>gi|348556688|ref|XP_003464153.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Cavia porcellus]
Length = 1961
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 685 RFAKRYLIWECCPLWISIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 744
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 745 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 800
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 801 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 855
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1138 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1197
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1198 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1253
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1254 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1303
>gi|311268685|ref|XP_003132158.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
5 [Sus scrofa]
Length = 1967
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 692 RFAQRYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1144 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1204 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
>gi|395843492|ref|XP_003794515.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Otolemur garnettii]
Length = 1986
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 VGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST 68
RF+ +W P + I++ +++ P L I I+ N + M + T ES
Sbjct: 689 RFAQRYLIWECCPLWLSIKQKVKFLVTDPFADLAITMCIVLNTLFMALEHYNMTAEFESM 748
Query: 69 ----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMNNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 864
Query: 184 KSDESH 189
S++ H
Sbjct: 865 YSEQRH 870
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + T+ E + +FT ++ E
Sbjct: 1195 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEDRKTVKVLLEYADKMFTYVFVLE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1255 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1355
>gi|148695059|gb|EDL27006.1| mCG129387 [Mus musculus]
Length = 1977
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI IL+ LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILLSTLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 35/164 (21%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF + Y +AW WLDF+++ ++ L+ +
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVS---------------------TLQFPS 1292
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ G + +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1293 LFLG-QVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
>gi|150417969|ref|NP_001092875.1| sodium channel protein type 5 subunit alpha isoform d [Homo
sapiens]
Length = 1998
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|134948032|ref|NP_573462.2| sodium channel protein type 4 subunit alpha [Mus musculus]
gi|148702345|gb|EDL34292.1| sodium channel, voltage-gated, type IV, alpha [Mus musculus]
Length = 1841
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIILLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1014 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIQTILEYADKVFTYIFILE 1073
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1074 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1129
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1130 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1179
>gi|81906264|sp|Q9ER60.1|SCN4A_MOUSE RecName: Full=Sodium channel protein type 4 subunit alpha; AltName:
Full=Sodium channel protein skeletal muscle subunit
alpha; AltName: Full=Sodium channel protein type IV
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.4
gi|11342595|emb|CAC17146.1| voltage-gated sodium channel [Mus musculus]
Length = 1841
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIILLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1014 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1073
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1074 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1129
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1130 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1179
>gi|342837673|tpg|DAA34926.1| TPA_inf: voltage-dependent sodium channel SCN4A [Gallus gallus]
Length = 1818
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 151/182 (82%), Gaps = 4/182 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH---PLFSLFIITTILTNCILM 57
TF+V++KGK IFRFSAT AL++L PFNPIRR AI +L+H LFS+FI+ TILTNC+ M
Sbjct: 89 TFIVLNKGKSIFRFSATPALYLLGPFNPIRRGAIKVLIHSYCKLFSMFIMITILTNCVFM 148
Query: 58 IMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
+ P ++ E FTGIYTFES +K+++RGF ++ FT+LRD WNWLDF+VI++AY+T
Sbjct: 149 TLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITE 208
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
+DLGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+G
Sbjct: 209 FVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIG 268
Query: 177 LQ 178
LQ
Sbjct: 269 LQ 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P+ +++ +++ P L I I+ N + M M P E E
Sbjct: 580 YKFAHTFLVWDCCYPWLKLKQFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFEN 639
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 640 VLTVGNLVFTGIFTAEMVLKLIA----LDPYEYFQQGWNIFDSIIVTLSLVELGLANVQG 695
Query: 123 LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSV 171
L+ LR+FR+LR K P L I+G + ++ NL V+ + +F +V
Sbjct: 696 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV 747
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + +F+ I+ E
Sbjct: 1011 IRKTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIE 1070
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1071 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1126
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1127 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1176
>gi|344268020|ref|XP_003405862.1| PREDICTED: sodium channel protein type 9 subunit alpha [Loxodonta
africana]
Length = 1974
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKTIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTLS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT ++ E
Sbjct: 1170 IRKTCYKIVEHNWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYVFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1230 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G+K +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMKVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P
Sbjct: 704 YRFAHTFLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTNEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 MLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|237512982|ref|NP_001153633.1| sodium channel protein type 5 subunit alpha isoform f [Homo
sapiens]
Length = 1962
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1140 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1200 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|426339984|ref|XP_004033915.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Gorilla gorilla gorilla]
Length = 1998
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|150417967|ref|NP_001092874.1| sodium channel protein type 5 subunit alpha isoform c [Homo
sapiens]
Length = 2016
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|410036705|ref|XP_001171891.2| PREDICTED: sodium channel protein type 5 subunit alpha [Pan
troglodytes]
Length = 2016
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|426339980|ref|XP_004033913.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 2
[Gorilla gorilla gorilla]
Length = 2016
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|187954621|gb|AAI40814.1| SCN5A protein [Homo sapiens]
gi|219521582|gb|AAI44622.1| SCN5A protein [Homo sapiens]
Length = 1983
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|237512980|ref|NP_001153632.1| sodium channel protein type 5 subunit alpha isoform e [Homo
sapiens]
Length = 1983
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|426339982|ref|XP_004033914.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 3
[Gorilla gorilla gorilla]
Length = 1962
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1140 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1200 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|410352287|gb|JAA42747.1| sodium channel, voltage-gated, type V, alpha subunit [Pan
troglodytes]
Length = 2016
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|410925829|ref|XP_003976382.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Takifugu rubripes]
Length = 2774
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 113/179 (63%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK +FRFSAT AL++ PF+ +R +A+ ILVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKALFRFSATSALYIFSPFHFLRAIAVRILVHSLFSLFIMFTILTNCFFMAMS 149
Query: 61 G-TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES +K+ ARGF L F++LRD WNWLDF VI +AYVT +D
Sbjct: 150 DPAPWTKYLEYTFTAIYTFESVIKIFARGFCLVPFSFLRDPWNWLDFTVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SV+ L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVRKLADVMILTVFCLSVFALIGLQ 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+ F+ +W P+ I+ ++++ P L I I+ N + M + P E
Sbjct: 683 YTFAKRYLIWECCPWWRQIKEWVKHMVMDPFLDLGITICIVLNTLFMALEHYPMTEEFNT 742
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D +++ L+ + +G+ ++
Sbjct: 743 MLSVGNLVFTGIFTAEMVLKLIA----LDPYYYFQQGWNIFDGVIVCLSLMELGLSNVEG 798
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 799 LSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 854
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E+ + +F+ I+ E
Sbjct: 1123 LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIEKRKVIKLVLEAADKVFSYIFVLE 1182
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y + W WLDF+++ ++ +++ D + +LRT R LR
Sbjct: 1183 MFLKWIAYGFK----KYFTNYWCWLDFLIVDVSLISLAANSLGYSDFTAIKSLRTLRALR 1238
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1239 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1288
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P N I+ ++ F + I+ I+ N + M++ E E I F I+T
Sbjct: 1439 PTNIIQAFFFDLVSKQAFDIMIMMLIIVNMVTMMVETDEQSEHMEAILNKINHVFIVIFT 1498
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA-----------AL 126
E +K+ F L + + AWN DF+VI L+ V GI L +L +
Sbjct: 1499 TECLIKI----FALRCY-FFTIAWNIFDFVVIILSIV--GIVLADLIEKYFVSPTLFRVI 1551
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD-SRGKKS 185
R R+ R L+ + G++T++ A++ S+ L ++ +L + ++A+ G+ + + KK
Sbjct: 1552 RLARIGRVLRLIRAAKGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMANFAYVKKQ 1611
Query: 186 DESHD 190
D D
Sbjct: 1612 DGIDD 1616
>gi|281345251|gb|EFB20835.1| hypothetical protein PANDA_018636 [Ailuropoda melanoleuca]
Length = 1987
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 149/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-LFSLFIITTILTNCILMIM 59
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSTLFSMLIMCTILTNCIFMTM 146
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT +
Sbjct: 147 SNPPEWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFV 206
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 DLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1181 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYVFILE 1240
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1241 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1296
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1297 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1346
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E
Sbjct: 715 YRFAHTFLIWNCSPYWIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 774
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 775 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
>gi|426339986|ref|XP_004033916.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 5
[Gorilla gorilla gorilla]
Length = 1983
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|291406371|ref|XP_002719526.1| PREDICTED: sodium channel, voltage-gated, type IV, alpha-like
[Oryctolagus cuniculus]
Length = 1826
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFN +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFNIVRRCAIKVLIHSLFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 NPPAWSKNVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 546 PWVKFKNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 605
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 606 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 661
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 662 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 703
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1007 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFIVE 1066
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1067 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1122
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1123 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1172
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA------IYILV-HPLFSLFIITTILTN 53
GKDIF ++A L P PI R +Y LV +F + I+ I N
Sbjct: 1294 GKDIFMTEEQKKYYNAMKKLGAKKPQKPIPRPQNKIQGMVYDLVTQQMFDIIIMILICLN 1353
Query: 54 CILMIMPGTPTIE-------STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ E + ++F I+T E +K++A L + Y WN DF
Sbjct: 1354 MVTMMVETDDQSELKVDILYNINMVFIVIFTGECVLKMLA----LRQY-YFTVGWNIFDF 1408
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1409 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1466
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1467 PALFNIGLLLFLVMFIYSIFGMSN 1490
>gi|410929251|ref|XP_003978013.1| PREDICTED: sodium channel protein type 2 subunit alpha-like,
partial [Takifugu rubripes]
Length = 2020
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL+ PF+P+RR+AI ILVH LFSLFI+ TILTNC M M
Sbjct: 135 TFIVLNKGKAIFRFSATSALYFFSPFHPVRRIAIKILVHSLFSLFIMCTILTNCCFMAMS 194
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT +D
Sbjct: 195 EPANWAKYLEYTFTGIYTFESLIKILARGFCVGPFTFLRDPWNWLDFSVIVMAYVTEFVD 254
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 255 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 313
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESA 81
++++ +++ P L I I+ N + M M P E ++F+GI+T E
Sbjct: 754 VKQLVKVMVMDPFLDLAITICIVLNTLFMAMEHYPMTEEFNGMLSIGNLVFSGIFTAEMV 813
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+K++A L+ + Y + WN D I++ L+ + +G+ ++ L+ LR+FR+LR K
Sbjct: 814 LKIIA----LDPYYYFQTGWNIFDSIIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLARS 869
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 870 WPTLNTLIKIIGNSMGALGNLTLVLAIIVFIFAVVGMQ 907
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1193 RKTCYQIVEHSWFESFIIFMILLSSGALAFEDIYIEQRKVVKVILEYADKIFTYIFILEM 1252
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLRA 134
+K +A GF Y + W WLDF++ I+L T+G D + +LRT R LR
Sbjct: 1253 LLKWLAYGFK----KYFTNYWCWLDFLIVDVSLISLVANTLGYSDFAAIKSLRTLRALRP 1308
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 LRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1357
>gi|348539053|ref|XP_003457004.1| PREDICTED: sodium channel protein type 3 subunit alpha [Oreochromis
niloticus]
Length = 1990
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 147/180 (81%), Gaps = 3/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+PIRR+AI ILVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYIFSPFHPIRRLAIKILVHSLFSLFIMCTILTNCCFMAM- 148
Query: 61 GTPTI--ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SEPEYWAKYLEYTFTGIYTFESLIKILARGFCVGPFTFLRDPWNWLDFSVIVMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 DLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESA 81
++++ +++ P L I I+ N + M M P + ++F+GI+T E
Sbjct: 709 VKQLVKIMVMDPFLDLAITVCIVLNTLFMAMEHYPMTDEFNGMLTIGNLVFSGIFTAEMV 768
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+K++A L+ + Y + WN D I++ L+ + +G+ D+ L+ LR+FR+LR K
Sbjct: 769 LKIIA----LDPYYYFQTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARS 824
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 825 WPTLNTLIKIIGNSMGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1149 RKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIEQRRVIKVVLEYADKIFTYIFILEM 1208
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLRA 134
+K +A GF Y + W WLDF++ I+L T+G DL + +LRT R LR
Sbjct: 1209 MLKWLAYGFK----KYFTNYWCWLDFLIVDVSLISLVANTLGYSDLAAIKSLRTLRALRP 1264
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1265 LRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1313
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 39/205 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRRVA------IYILV-HPLFSLFIITTILT 52
+G+DIF ++A L P PI R + LV F + I+ IL
Sbjct: 1433 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPMNALQGFFFDLVGKQAFDIIIMVLILF 1492
Query: 53 NCILMIMP---GTPTIE----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I M++ P +E + + F I+T E +K+MA L + + WN D
Sbjct: 1493 NMITMMVETDEQPPQMEKILNNINLAFIIIFTAECLIKIMA----LRCY-FFTVGWNIFD 1547
Query: 106 FIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
F+V+ L+ V GI L ++ +R R+ R L+ + G++T++ A++ S
Sbjct: 1548 FVVVILSIV--GIVLADIIEKYFVSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMS 1605
Query: 155 VKNLRDVIILTMFSLSVFALMGLQD 179
+ L ++ +L + ++A+ G+ +
Sbjct: 1606 LPALFNIGLLLFLVMFIYAIFGMAN 1630
>gi|296490574|tpg|DAA32687.1| TPA: sodium channel, voltage-gated, type IX, alpha subunit [Bos
taurus]
Length = 1987
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH FS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHAAFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1180 IRKTCFRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYIFILE 1239
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1240 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1295
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1296 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1345
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|160707935|ref|NP_001104257.1| sodium channel protein type 9 subunit alpha [Bos taurus]
Length = 1987
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH FS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHAAFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1180 IRKTCFRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYIFILE 1239
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1240 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1295
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1296 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1345
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|119578603|gb|EAW58199.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_c
[Homo sapiens]
Length = 1760
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 505 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 564
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 565 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 620
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 621 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 676
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 968 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1027
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A+ V++ +LG + +LRT + L+
Sbjct: 1028 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVFLVSLIANALGYSELGAIKSLRTLKALK 1083
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LK ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1084 PLKALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1133
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1287 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1346
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1347 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1399
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1400 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1452
>gi|301783107|ref|XP_002926969.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
5 [Ailuropoda melanoleuca]
Length = 1989
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 148/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVL-DPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 148
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 SLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 720 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 779
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 780 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 835
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 836 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 891
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1184 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1244 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
>gi|426220959|ref|XP_004004679.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Ovis aries]
Length = 1987
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH FS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHAAFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1180 IRKTCFRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1239
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1240 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1295
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1296 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1345
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|301783105|ref|XP_002926968.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
4 [Ailuropoda melanoleuca]
Length = 1952
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 148/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVL-DPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 148
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 SLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 683 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 742
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 743 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 798
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 799 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 854
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|426220961|ref|XP_004004680.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 2
[Ovis aries]
Length = 1976
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH FS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHAAFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1169 IRKTCFRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1228
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1229 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1284
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1285 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1334
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 703 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 762
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 763 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
>gi|301783101|ref|XP_002926966.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 2001
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 148/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVL-DPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 148
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 SLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP------- 63
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 732 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 791
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 792 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1196 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|363736225|ref|XP_422021.3| PREDICTED: sodium channel protein type 2 subunit alpha [Gallus
gallus]
Length = 1993
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFN IRRVAI ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATSALYLLSPFNVIRRVAIKILVHSLFSMLIMLTILTNCVFMTWS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFE VK++ARGF ++ FT LRD WNWLDF+VI+ AYVT +D
Sbjct: 152 KLPEWTKNVEYTFTGIYTFEFLVKILARGFCIDDFTCLRDPWNWLDFVVISFAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 270
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W + + ++ V +I++ PL L I I+ N + M M P E+
Sbjct: 732 YKFAHTYLIWNCCEVWLKVKSVVSFIVMDPLVDLAITICIILNTLFMAMEHYPMTETFNN 791
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+FTGI+ E +K++A ++ F Y + WN D ++ L+ V + + ++
Sbjct: 792 TLKVGNQVFTGIFAAEMVLKIIA----MDPFYYFQVGWNIFDSFIVTLSLVELFLANVDG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 31/176 (17%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES---------------TEVIFT 73
+R+ I+ H F FI+ IL + GT E + IFT
Sbjct: 1189 LRKTCYRIVEHNWFETFIVFMIL------LSSGTLAFEDIYIEQRKTIKVILDYADKIFT 1242
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALR 127
I+ E +K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LR
Sbjct: 1243 YIFILEMVLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVATALGFSELGAIKSLR 1298
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
T R LR L+ ++ G++ +V A+ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1299 TLRALRPLRALSRFEGMRVVVNALTGAIPSIMNVLLVCLTFWLIFSIMGVNLFAGK 1354
>gi|301783109|ref|XP_002926970.1| PREDICTED: sodium channel protein type 3 subunit alpha-like isoform
6 [Ailuropoda melanoleuca]
Length = 2000
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 148/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVL-DPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 148
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 SLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>gi|126326275|ref|XP_001367438.1| PREDICTED: sodium channel protein type 9 subunit alpha isoform 1
[Monodelphis domestica]
Length = 1978
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFN IRR++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKTIFRFSATPALYILTPFNLIRRISIKILVHSLFSMLIMCTILTNCIFMTLS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI A++T ++
Sbjct: 147 SPPDWTKNVEYTFTGIYTFESLVKILARGFCIGPFTFLRDPWNWLDFIVICFAFLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALIGLQ 265
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1171 IRKTCYRIVEHNWFESFIVLMILLSSGALAFEDIYIEQRKTIKTVLEYADKIFTYVFILE 1230
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A G+ + Y +AW WLDF++ I L T+G DLG + +LRT R LR
Sbjct: 1231 MLLKWVAYGYKV----YFTNAWCWLDFLIVDVSIITLVASTLGYSDLGPIKSLRTLRALR 1286
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1287 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1336
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P + ++ I++ P L I I+ N + M M P E
Sbjct: 705 YKFANTFLIWNCSPRWLKFKKFIHLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEGFKN 764
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 765 MLTVGNLVFTGIFAAEMVLKIIA----MDPYEYFQVGWNIFDSVIVTLSLVELFLADVEG 820
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 821 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 876
>gi|4321647|gb|AAD15789.1| voltage-gated sodium channel alpha subunit [Homo sapiens]
Length = 1980
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFITQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|18959222|ref|NP_579823.1| sodium channel protein type 9 subunit alpha [Rattus norvegicus]
gi|55976160|sp|O08562.1|SCN9A_RAT RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Peripheral sodium channel 1; Short=PN1; AltName:
Full=Sodium channel protein type IX subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.7
gi|1906594|gb|AAB50403.1| PN1 [Rattus norvegicus]
gi|2501838|gb|AAB80701.1| voltage-gated sodium channel [Rattus norvegicus]
Length = 1984
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTLS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+IFTGI+ E +K++A ++ + Y + WN D +++ L+ + + + D+
Sbjct: 774 VLAVGNLIFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLIELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>gi|112494927|gb|ABI20136.1| cardiac voltage-gated sodium channel alpha subunit Nav1.5 [Danio
rerio]
Length = 1954
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+PIRR +I ILVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYIFSPFHPIRRASIRILVHSLFSLFIMCTILTNCCFMAMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 EPAQWAKYVEYTFTGIYTFESLIKILARGFCIGPFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
+++ P L I I+ N + M + P + ++FTGI+T E +K++A
Sbjct: 702 MVMDPFLDLAITICIVLNTLFMALEHYPMTDEFNRMLSVGNLVFTGIFTAEMVLKIIA-- 759
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
L+ + Y + WN D ++++L+ + +G+ ++ L+ LR+FR+LR K P L T+
Sbjct: 760 --LDPYYYFQQGWNIFDSLIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTL 817
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ ++ + +FA++G+Q
Sbjct: 818 IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 848
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1137 LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIDQRKVVKVILEYADKIFTYIFILE 1196
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
++K +A GF Y + W WLDF+++ ++ V T+G D + +LRT R LR
Sbjct: 1197 MSLKWIAYGFR----KYFTNYWCWLDFLIVDVSLVSLVANTLGYSDFAAIKSLRTLRALR 1252
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1253 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1302
>gi|829034|gb|AAC42059.1| sodium channel protein 6 [Rattus norvegicus]
gi|1582002|prf||2117364A voltage-gated Na channel NaCh6
Length = 1976
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/189 (62%), Positives = 151/189 (79%), Gaps = 1/189 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 95 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 155 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQL 274
Query: 180 SRGKKSDES 188
G S +
Sbjct: 275 FHGNLSKQC 283
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 720 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 779
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 780 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 835
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 836 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 891
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1183 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1242
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1243 MLLKWTTYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1298
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1299 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1348
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1503 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1562
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1563 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1615
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1616 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1668
>gi|113675822|ref|NP_001038588.1| sodium channel, voltage gated, type XII, alpha b [Danio rerio]
gi|76786323|gb|ABA54923.1| voltage-gated sodium channel type V alpha subunit Nav1.5Lb [Danio
rerio]
Length = 1954
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+PIRR +I ILVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYIFSPFHPIRRASIRILVHSLFSLFIMCTILTNCCFMAMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 EPAQWAKYVEYTFTGIYTFESLIKILARGFCIGPFTFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
+++ P L I I+ N + M + P + ++FTGI+T E +K++A
Sbjct: 702 MVMDPFLDLAITICIVLNTLFMALEHYPMTDEFNRMLSVGNLVFTGIFTAEMVLKIIA-- 759
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
L+ + Y + WN D ++++L+ + +G+ ++ L+ LR+FR+LR K P L T+
Sbjct: 760 --LDPYYYFQQGWNIFDSLIVSLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTL 817
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ ++ + +FA++G+Q
Sbjct: 818 IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 848
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1137 LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIDQRKVVKVILEYADKIFTYIFILE 1196
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
++K +A GF Y + W WLDF+++ ++ V T+G D + +LRT R LR
Sbjct: 1197 MSLKWIAYGFR----KYFTNYWCWLDFLIVDVSLVSLVANTLGYSDFAAIKSLRTLRALR 1252
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1253 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1302
>gi|395519681|ref|XP_003763971.1| PREDICTED: sodium channel protein type 9 subunit alpha [Sarcophilus
harrisii]
Length = 1988
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFSATPALYILSPFSLIRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI A++T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCIGPFTFLRDPWNWLDFIVICFAFLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALIGLQ 265
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT ++ E
Sbjct: 1182 IRKTCYKIVEHNWFESFIVLMILLSSGALAFEDIYIEKRKTIKTVLEYADKIFTYVFIME 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF++ I L T+G DLG + +LRT R LR
Sbjct: 1242 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSIITLVASTLGYSDLGPIKSLRTLRALR 1297
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1298 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1347
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W P + ++ I++ P L I I+ N + M M P
Sbjct: 716 YKFANTFLIWNCSPRWLKFKKFIHLIVMDPFVDLAITICIVLNTLFMAMEHYPMTAGFKN 775
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D +++ L+ V + + D+
Sbjct: 776 VLYVGNLVFTGIFTAEMVLKLIA----LDPYEYFQVGWNIFDSVIVTLSLVELLLNDVEG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
>gi|311266955|ref|XP_003131332.1| PREDICTED: sodium channel protein type 4 subunit alpha [Sus scrofa]
Length = 1830
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL+VL PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYVLSPFSVVRRSAIKVLIHSLFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPSWSKNVEYTFTGIYTFESLIKILARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++ S +W P+ +++ I++ P L I I+ N + M M P E +
Sbjct: 537 YKCSHKVLIWNCCGPWMKFKKIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFDA 596
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y + WN D I++ L+ V +G+ ++
Sbjct: 597 VLTVGNLVFTGIFTAEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQG 652
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 653 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 708
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT ++ E
Sbjct: 1011 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYVFIIE 1070
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1071 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1126
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1127 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1176
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 29/199 (14%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I LV+ L + F IT ++ C+
Sbjct: 1298 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGLVYDLVTKQAFDITIMMLICLN 1357
Query: 57 MIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRD-----AWNWLDFIVIAL 111
M+ T E +++ +YT ++ G L LR WN DF+V+ L
Sbjct: 1358 MVTMMVETDEQSQLKVDILYTINMVFIIVFTGECLLKMLALRQYYFTVGWNIFDFVVVIL 1417
Query: 112 AYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRD 160
+ V G+ L +L +R R+ R L+ + G++T++ A++ S+ L +
Sbjct: 1418 SIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFN 1475
Query: 161 VIILTMFSLSVFALMGLQD 179
+ +L + ++++ G+ +
Sbjct: 1476 IGLLLFLVMFIYSIFGMSN 1494
>gi|326922809|ref|XP_003207637.1| PREDICTED: sodium channel protein type 2 subunit alpha-like,
partial [Meleagris gallopavo]
Length = 1030
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFN IRRVAI ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATSALYLLSPFNVIRRVAIKILVHSLFSMLIMLTILTNCVFMTWR 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFE VK++ARGF ++ FT LRD WNWLDF+VI+ AYVT +D
Sbjct: 152 KLPEWTKNVEYTFTGIYTFEFLVKILARGFCIDDFTCLRDPWNWLDFVVISFAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 270
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 13/177 (7%)
Query: 11 IFRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-- 67
+++F+ T +W F ++ + +I++ PL L I I+ N + M + P E+
Sbjct: 635 LYKFAHTYLIWNCCEFWLKVKSIVSFIVMDPLVDLAITICIILNTLFMALEHYPMTEAFN 694
Query: 68 -----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLG 121
+FTGI+ E +K++A ++ F Y + WN D ++ L+ V + + ++
Sbjct: 695 NILKVGNQVFTGIFAAEMVLKIIA----MDPFYYFQVGWNIFDSFIVTLSLVELFLANVD 750
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 751 GLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 807
>gi|126723545|ref|NP_001075827.1| sodium channel protein type 9 subunit alpha [Oryctolagus cuniculus]
gi|55976305|sp|Q28644.1|SCN9A_RABIT RecName: Full=Sodium channel protein type 9 subunit alpha; AltName:
Full=Nas; AltName: Full=Schwann cell sodium channel;
AltName: Full=Sodium channel protein type IX subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.7
gi|1022714|gb|AAA89159.1| sodium channel alpha-subunit [Oryctolagus cuniculus]
Length = 1984
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++ E FTGIYTFES VK+ ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPAEWTKNVEYTFTGIYTFESLVKIFARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DVIILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVIILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1178 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1238 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1343
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W PF + IYI+V P L I I+ N + M M P E
Sbjct: 712 YRFAHTFLIWNCSPFWIKFKKFIYIIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 771
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 772 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNVFDSLIVTLSLVELFLADVEG 827
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 828 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGPLGNLTLVLAIIVFIFAVVGMQ 883
>gi|354487623|ref|XP_003505971.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
1 [Cricetulus griseus]
Length = 2019
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+FI+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMFIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQRYLIWECCPLWMSIKQKVKFLVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERQTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|358417501|ref|XP_003583660.1| PREDICTED: sodium channel protein type 4 subunit alpha-like [Bos
taurus]
gi|359077058|ref|XP_003587508.1| PREDICTED: sodium channel protein type 4 subunit alpha-like [Bos
taurus]
Length = 1834
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKSIFRFSATPALYILSPFSIVRRCAIKVLIHSLFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPSWSKHVEYTFTGIYTFESLIKILARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ +++ I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKKIVNLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDSVLNVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1017 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFILE 1076
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1077 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1132
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1133 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1182
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 43/206 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA------IYILVHPLFSLFIITTILTNC 54
GKDIF ++A L P PI R +Y LV F IT ++ C
Sbjct: 1304 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGMVYDLVTK--QAFDITIMILIC 1361
Query: 55 ILMIMPGTPTIESTE----------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWL 104
+ M+ T + ++ ++F I+T E +K++A L + Y WN
Sbjct: 1362 LNMVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMLA----LRQY-YFTVGWNIF 1416
Query: 105 DFIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIE 153
DF+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++
Sbjct: 1417 DFVVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMM 1474
Query: 154 SVKNLRDVIILTMFSLSVFALMGLQD 179
S+ L ++ +L + ++++ G+ +
Sbjct: 1475 SLPALFNIGLLLFLVMFIYSIFGMSN 1500
>gi|354487629|ref|XP_003505974.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
4 [Cricetulus griseus]
Length = 1965
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+FI+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMFIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQRYLIWECCPLWMSIKQKVKFLVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1143 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERQTIKVLLEYADKMFTYVFVLE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1203 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1308
>gi|327264339|ref|XP_003216971.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
5 [Anolis carolinensis]
Length = 1964
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRDAWNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDAWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1172 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTCLEYADKVFTYIFILE 1231
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1232 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1287
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1288 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1337
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 709 YKFANVVLIWECHPYWLKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPAFEH 768
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGN 122
++FTGI+ E +K++A ++ + Y ++ WN D +++L+ + M D+
Sbjct: 769 VLAVGNLVFTGIFAAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLLELMLADVEG 824
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 825 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 880
>gi|27806135|ref|NP_776883.1| sodium channel protein type 5 subunit alpha [Bos taurus]
gi|18477465|emb|CAC80974.1| voltage-gated sodium channel alpha subunit [Bos taurus]
gi|296475012|tpg|DAA17127.1| TPA: voltage-gated sodium channel type V alpha [Bos taurus]
Length = 2022
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL VL PF+PIRRVA+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALHVLSPFHPIRRVAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E IFT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYIFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 13/186 (6%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 692 RFAQHYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+F +LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFCLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 867
Query: 184 KSDESH 189
S++ H
Sbjct: 868 YSEQRH 873
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1199 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1258
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L +G ++G + +LRT R LR
Sbjct: 1259 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVLLISLVANALGFAEMGPIKSLRTLRALR 1314
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>gi|301772384|ref|XP_002921605.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Ailuropoda melanoleuca]
Length = 1977
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 721 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 780
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 781 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 836
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 892
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1184 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1244 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1504 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1563
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1564 CECVLKM----FALRHY-YFTVGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1616
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1617 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1669
>gi|3309115|gb|AAC26015.1| voltage-gated sodium channel variant rPN4a [Rattus norvegicus]
Length = 1988
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 732 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 791
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 792 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1515 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1574
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1575 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1627
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1628 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1680
>gi|441620262|ref|XP_004088655.1| PREDICTED: sodium channel protein type 8 subunit alpha [Nomascus
leucogenys]
Length = 1980
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|410906153|ref|XP_003966556.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 2
subunit alpha [Takifugu rubripes]
Length = 2026
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRF+AT AL++L PFNP+RRVAI +LVH +FS+ I+ TILTNC M +
Sbjct: 90 TFIVLNRGKAIFRFNATPALYILKPFNPLRRVAIRVLVHSMFSMLIMFTILTNCAFMTLS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + F++LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPEWAKNVEYTFTGIYTFESLIKILARGFCVGKFSFLRDPWNWLDFSVILMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ T +W P + I+ + +++ P L I I+ N + M M P T E
Sbjct: 733 YRFANTCLIWDCCPQWLKIKEIVSMVVMDPFVDLTITICIILNTLFMAMEHYPMTTEFDN 792
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+T E +K++A L+ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 793 VLSVGNLVFTGIFTAEMCLKIIA----LDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 848
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 849 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 904
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T I E + +FT ++ E
Sbjct: 1221 LRKTCFIIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTVKIVLEYADKVFTYVFILE 1280
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF+ Y +AW WLDF+++ ++ V T+G +L + +LRT R LR
Sbjct: 1281 MLLKWVAYGFV----KYFTNAWCWLDFLIVDVSLVSLVANTLGYSELTAIKSLRTLRALR 1336
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1337 PLRALSRFEGMRVVVNALXGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1386
>gi|395835397|ref|XP_003790667.1| PREDICTED: sodium channel protein type 8 subunit alpha [Otolemur
garnettii]
Length = 1922
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLTVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 107 IVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTM 166
I AL Y +LG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ +
Sbjct: 1222 IANALGYS----ELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCL 1277
Query: 167 FSLSVFALMGLQDSRGK 183
+F++MG+ GK
Sbjct: 1278 IFWLIFSIMGVNLFAGK 1294
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1449 PVNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILNWINLVFVIFFT 1508
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1509 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1561
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1562 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1614
>gi|351697574|gb|EHB00493.1| Sodium channel protein type 8 subunit alpha [Heterocephalus glaber]
Length = 1976
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESVVKILARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 721 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 780
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 781 VLTVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 836
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 892
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1184 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1244 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1503 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1562
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1563 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1615
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1616 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1668
>gi|253910955|gb|ACT36718.1| skeletal muscle voltage-gated sodium channel [Thamnophis couchii]
Length = 1875
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+++++KG IFRF+A AL++LDPFNPIR AI +L+H LFS+FI+ TIL NC+ M M
Sbjct: 90 TYIILNKGNTIFRFTAAPALYMLDPFNPIRNGAIKVLIHSLFSMFIMITILANCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFE+ +KV+ARGF ++SFT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPIWAKDVEYTFTGIYTFEAMIKVLARGFCIDSFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALIGLQ 268
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++++ I++ P L I I+ N + M M P E
Sbjct: 586 YKFAHAVLIWNCCPVWVKLKQIVKLIVLDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 645
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 646 VLNVGNLVFTGIFTAEMVLKLIA----LDPYEYFQIGWNIFDSIIVTLSLVELGLANVQG 701
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 702 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 757
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT ++ E
Sbjct: 1046 LRKACFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRHTIRTILEYADKIFTYVFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1106 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1161
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1162 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1211
>gi|338726087|ref|XP_001916036.2| PREDICTED: sodium channel protein type 8 subunit alpha [Equus
caballus]
Length = 1916
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>gi|78126165|ref|NP_062139.2| sodium channel protein type 8 subunit alpha [Rattus norvegicus]
gi|81886863|sp|O88420.1|SCN8A_RAT RecName: Full=Sodium channel protein type 8 subunit alpha; AltName:
Full=Peripheral nerve protein type 4; Short=PN4;
AltName: Full=Sodium channel 6; Short=NaCh6; AltName:
Full=Sodium channel protein type VIII subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.6
gi|3309113|gb|AAC26014.1| voltage-gated sodium channel rPN4 [Rattus norvegicus]
Length = 1978
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>gi|327264331|ref|XP_003216967.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Anolis carolinensis]
Length = 1990
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRDAWNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDAWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1198 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTCLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1258 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 735 YKFANVVLIWECHPYWLKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPAFEH 794
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGN 122
++FTGI+ E +K++A ++ + Y ++ WN D +++L+ + M D+
Sbjct: 795 VLAVGNLVFTGIFAAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLLELMLADVEG 850
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 851 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 906
>gi|149032006|gb|EDL86918.1| sodium channel, voltage-gated, type VIII, alpha polypeptide,
isoform CRA_a [Rattus norvegicus]
Length = 1988
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 732 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 791
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 792 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 847
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 848 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 903
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1515 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1574
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1575 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1627
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1628 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1680
>gi|432914838|ref|XP_004079146.1| PREDICTED: sodium channel protein type 4 subunit alpha-like
[Oryzias latipes]
Length = 1956
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFS+T AL++ PF+ IR +AI ILVH LFS FI+ TILTNC M M
Sbjct: 87 TFVVLNKGKAIFRFSSTSALYIFSPFHFIRSIAIKILVHSLFSYFIMFTILTNCFFMAMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
PT + E FTGIYTFESA+K+ ARGF FT+LRD WNWLDFIVI +AYVT ID
Sbjct: 147 DPPTWTKYLEYTFTGIYTFESAIKIFARGFCTMPFTFLRDPWNWLDFIVIVMAYVTEFID 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 265
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+ F+ +W P+ ++ ++++ P L I I+ N + M + P +
Sbjct: 702 YSFAKRYLIWSCCPWWLKLKEWVKFMVMDPFLDLGITICIVLNTLFMALEHYPMTDEFNT 761
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K+ A L+ + Y + WN D +++ L+ + +G+ ++
Sbjct: 762 MLSVGNLVFTGIFTAEMVLKLTA----LDPYYYFQQGWNIFDGVIVCLSLMELGLSNVEG 817
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 818 LSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 873
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +F+ I+ E
Sbjct: 1141 LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIERRKVIKVILEYADKVFSYIFVLE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y + W WLDF++ I+L ++G D + +LRT R LR
Sbjct: 1201 MFLKWIAYGFK----KYFTNYWCWLDFLIVDVSLISLVANSLGYSDFAAIKSLRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G D+F ++A L P PI R A ++ F + I+ I+ N
Sbjct: 1426 GHDLFMTEEQKKYYNAMKKLGSKKPQKPIPRPANILQAFFFDLVSKQAFDIMIMMLIIVN 1485
Query: 54 CILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ E E ++F I+T E +K+ F L + + AWN DF
Sbjct: 1486 MVTMMVETDEQSEQMESILNTINLVFIVIFTTECLIKI----FALRCY-FFTVAWNIFDF 1540
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+VI L+ V GI L ++ +R R+ R L+ + G++T++ A++ S+
Sbjct: 1541 VVIILSIV--GIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAAKGIRTLLFALMMSM 1598
Query: 156 KNLRDVIILTMFSLSVFALMGLQD-SRGKKSDESHD 190
L ++ +L + ++A+ G+ + + KK D D
Sbjct: 1599 PALFNIGLLLFLVMFIYAIFGMANFAYVKKQDGIDD 1634
>gi|34098761|sp|Q9WTU3.1|SCN8A_MOUSE RecName: Full=Sodium channel protein type 8 subunit alpha; AltName:
Full=Sodium channel protein type VIII subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.6
gi|4426569|gb|AAD20438.1| neuronal voltage-gated sodium channel alpha subunit [Mus musculus]
Length = 1978
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>gi|172072624|ref|NP_035453.2| sodium channel protein type 8 subunit alpha isoform 2 [Mus
musculus]
Length = 1978
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>gi|354500747|ref|XP_003512459.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Cricetulus griseus]
Length = 1978
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>gi|951126|gb|AAC52242.1| SCN8A [Mus musculus]
gi|1586351|prf||2203417A voltage gated Na channel Scn8a
Length = 1732
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 476 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 535
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 536 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 591
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 592 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 647
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 939 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 998
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 999 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1054
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1055 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1104
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1259 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1318
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1319 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1371
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1372 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1424
>gi|253910953|gb|ACT36717.1| skeletal muscle voltage-gated sodium channel [Thamnophis elegans]
Length = 1875
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+++++KG IFRF+A AL++LDPFNPIR AI +L+H LFS+FI+ TIL NC+ M M
Sbjct: 90 TYIILNKGNTIFRFTAAPALYMLDPFNPIRNGAIKVLIHSLFSMFIMITILANCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFE+ +KV+ARGF ++SFT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPIWAKDVEYTFTGIYTFEAMIKVLARGFCIDSFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALIGLQ 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + I++ P L I I+ N + M M P E
Sbjct: 586 YKFAHAVLIWNCCPLWVKLKHIVKLIVLDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 645
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 646 VLNVGNLVFTGIFTAEMVLKLIA----LDPYEYFQIGWNIFDSIIVTLSLVELGLANVQG 701
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 702 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 757
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT ++ E
Sbjct: 1046 LRKACFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRHTIRTILEYADKIFTYVFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1106 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1161
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1162 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1211
>gi|253910951|gb|ACT36716.1| skeletal muscle voltage-gated sodium channel [Thamnophis atratus]
Length = 1875
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+++++KG IFRF+A AL++LDPFNPIR AI +L+H LFS+FI+ TIL NC+ M M
Sbjct: 90 TYIILNKGNTIFRFTAAPALYMLDPFNPIRNGAIKVLIHSLFSMFIMITILANCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFE+ +KV+ARGF ++SFT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPIWAKDVEYTFTGIYTFEAMIKVLARGFCIDSFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALIGLQ 268
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++++ I++ P L I I+ N + M M P E
Sbjct: 586 YKFAHAVLIWNCCPVWVKLKQIVKLIVLDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 645
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 646 VLNVGNLVFTGIFTAEMVLKLIA----LDPYEYFQIGWNIFDSIIVTLSLVELGLANVQG 701
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 702 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 757
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT ++ E
Sbjct: 1046 LRKACFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRHTIRTILEYADKIFTYVFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1106 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1161
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1162 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1211
>gi|327264335|ref|XP_003216969.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Anolis carolinensis]
Length = 1979
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRDAWNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDAWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTCLEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANVVLIWECHPYWLKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPAFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGN 122
++FTGI+ E +K++A ++ + Y ++ WN D +++L+ + M D+
Sbjct: 784 VLAVGNLVFTGIFAAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLLELMLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
>gi|281344475|gb|EFB20059.1| hypothetical protein PANDA_016674 [Ailuropoda melanoleuca]
Length = 2020
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 148/185 (80%), Gaps = 7/185 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP------LFSLFIITTILTNC 54
TF+V++KGK I RFSAT AL++L PFNP+R++AI ILVH LF++ I+ TILTNC
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPLRKIAIKILVHSYPFFKYLFNVLIMCTILTNC 149
Query: 55 ILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AY
Sbjct: 150 VFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAY 209
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
VT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFA
Sbjct: 210 VTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFA 269
Query: 174 LMGLQ 178
L+GLQ
Sbjct: 270 LIGLQ 274
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 737 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 796
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1204 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1264 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1319
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1320 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1369
>gi|441620268|ref|XP_004088656.1| PREDICTED: sodium channel protein type 8 subunit alpha [Nomascus
leucogenys]
Length = 1981
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 725 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 784
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 785 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 840
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 841 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 896
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1188 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1247
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1248 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1303
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1304 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1353
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1508 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1567
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1568 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1620
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1621 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1673
>gi|410964455|ref|XP_003988770.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Felis catus]
Length = 1980
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|291389169|ref|XP_002711236.1| PREDICTED: voltage-gated sodium channel alpha subunit-like isoform
1 [Oryctolagus cuniculus]
Length = 1980
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLTVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRRTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|149032007|gb|EDL86919.1| sodium channel, voltage-gated, type VIII, alpha polypeptide,
isoform CRA_b [Rattus norvegicus]
Length = 1978
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>gi|148672123|gb|EDL04070.1| sodium channel, voltage-gated, type VIII, alpha, isoform CRA_b [Mus
musculus]
Length = 1978
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>gi|410046722|ref|XP_001141985.3| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Pan troglodytes]
Length = 1914
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>gi|350583949|ref|XP_003481629.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha-like [Sus scrofa]
Length = 1980
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + + T I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVSTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>gi|148672122|gb|EDL04069.1| sodium channel, voltage-gated, type VIII, alpha, isoform CRA_a [Mus
musculus]
Length = 1761
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 505 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 564
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 565 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 620
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 621 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 676
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 968 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1027
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1028 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1083
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1084 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1133
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1288 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1347
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1348 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1400
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1401 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1453
>gi|440905747|gb|ELR56090.1| Sodium channel protein type 2 subunit alpha, partial [Bos grunniens
mutus]
Length = 1623
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 148/185 (80%), Gaps = 7/185 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP------LFSLFIITTILTNC 54
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSYPFFKYLFNVLIMCTILTNC 149
Query: 55 ILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AY
Sbjct: 150 VFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAY 209
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
VT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFA
Sbjct: 210 VTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFA 269
Query: 174 LMGLQ 178
L+GLQ
Sbjct: 270 LIGLQ 274
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 737 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 796
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1204 LRKTCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1264 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1319
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1320 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1369
>gi|149032008|gb|EDL86920.1| sodium channel, voltage-gated, type VIII, alpha polypeptide,
isoform CRA_c [Rattus norvegicus]
Length = 1761
Score = 238 bits (607), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 505 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 564
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 565 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 620
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 621 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 676
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 968 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1027
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1028 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1083
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1084 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1133
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1288 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1347
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1348 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1400
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1401 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1453
>gi|403296672|ref|XP_003939222.1| PREDICTED: sodium channel protein type 8 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1979
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 723 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 782
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 783 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 838
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 839 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 894
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1186 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1245
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1246 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1301
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1302 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1351
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1506 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1565
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1566 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1618
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1619 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1671
>gi|343098398|tpg|DAA34930.1| TPA_inf: voltage-dependent sodium channel SCN1A [Anolis
carolinensis]
Length = 1922
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL+++ PF+ +RR+AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 1 TFIVLNRGKAIFRFSATPALYIISPFSLLRRIAIKILVHSLFSMLIMCTILTNCVFMTLS 60
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI AYVT +D
Sbjct: 61 NPPEWTKNVEYTFTGIYTFESLIKIIARGFCIDDFTFLRDPWNWLDFTVITFAYVTEFVD 120
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 121 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 179
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ +W P + ++ +++ P L I I+ N + M M P E E
Sbjct: 658 YKFANIFLIWDCCPCWLKVKHFVNIVVMDPFVDLAITICIVLNTLFMAMEHYPMSEEFEG 717
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 718 VLNVGNLVFTGIFTGEMFFKLVA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 773
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 774 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 829
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1123 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDVYIEQRKTIKTMLEYADKVFTYIFILE 1182
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1183 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1238
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1239 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1288
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVAIY------ILVHPLFSLFIITTILTNC 54
G+DIF ++A L P PI R Y + +F + I+ I N
Sbjct: 1411 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPNKYQGVVFDFVTRQVFDISIMILICLNM 1470
Query: 55 ILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFI 107
I M++ + TE +IF ++T E +K+++ + Y WN DF+
Sbjct: 1471 ITMMVETDDQSQQTEEILYRINLIFIVLFTGECVLKLISL-----RYYYFTIGWNIFDFV 1525
Query: 108 VIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESVK 156
V+ L+ V G+ L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1526 VVILSIV--GMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLP 1583
Query: 157 NLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1584 ALFNIGLLLFLVMFIYAIFGMSN 1606
>gi|426372573|ref|XP_004053197.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 4
[Gorilla gorilla gorilla]
Length = 1981
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 725 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 784
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 785 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 840
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 841 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 896
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1188 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1247
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1248 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1303
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1304 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1353
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1508 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1567
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1568 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1620
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1621 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1673
>gi|354479427|ref|XP_003501911.1| PREDICTED: sodium channel protein type 4 subunit alpha [Cricetulus
griseus]
Length = 1841
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ +R+ I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 556 PWVKFKRIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 615
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 616 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 671
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 672 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 713
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
>gi|426372571|ref|XP_004053196.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Gorilla gorilla gorilla]
Length = 1980
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|410215096|gb|JAA04767.1| sodium channel, voltage gated, type VIII, alpha subunit [Pan
troglodytes]
gi|410300920|gb|JAA29060.1| sodium channel, voltage gated, type VIII, alpha subunit [Pan
troglodytes]
Length = 1939
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1466 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|440895234|gb|ELR47486.1| Sodium channel protein type 9 subunit alpha [Bos grunniens mutus]
Length = 1995
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 148/180 (82%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-LFSLFIITTILTNCILMIM 59
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH FS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHATAFSMLIMCTILTNCIFMTM 146
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AYVT +
Sbjct: 147 SNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYVTEFV 206
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 DLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1180 IRKTCFRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYIFILE 1239
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1240 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1295
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1296 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1345
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 715 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 774
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 775 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
>gi|327277936|ref|XP_003223719.1| PREDICTED: sodium channel protein type 1 subunit alpha-like [Anolis
carolinensis]
Length = 1973
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL+++ PF+ +RR+AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 56 TFIVLNRGKAIFRFSATPALYIISPFSLLRRIAIKILVHSLFSMLIMCTILTNCVFMTLS 115
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI AYVT +D
Sbjct: 116 NPPEWTKNVEYTFTGIYTFESLIKIIARGFCIDDFTFLRDPWNWLDFTVITFAYVTEFVD 175
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 176 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 234
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ +W P + ++ +++ P L I I+ N + M M P E E
Sbjct: 708 YKFANIFLIWDCCPCWLKVKHFVNIVVMDPFVDLAITICIVLNTLFMAMEHYPMSEEFEG 767
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 768 VLNVGNLVFTGIFTGEMFFKLVA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 823
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 824 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 879
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1173 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDVYIEQRKTIKTMLEYADKVFTYIFILE 1232
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1233 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1288
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1289 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1338
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R V + +F + I+ I N
Sbjct: 1461 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKYQGVVFDFVTRQVFDISIMILICLN 1520
Query: 54 CILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I M++ + TE +IF ++T E +K+++ + Y WN DF
Sbjct: 1521 MITMMVETDDQSQQTEEILYRINLIFIVLFTGECVLKLISL-----RYYYFTIGWNIFDF 1575
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1576 VVVILSIV--GMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1633
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1634 PALFNIGLLLFLVMFIYAIFGMSN 1657
>gi|426239135|ref|XP_004013482.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha [Ovis aries]
Length = 1833
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKSIFRFSATPALYLLSPFSIVRRCAIKVLIHSLFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPSWSKHVEYTFTGIYTFESLIKILARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ +++ I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 545 PWVKFKKIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDSVLNVGNLVFTGIFT 604
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 605 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 660
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 661 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 702
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 84/162 (51%), Gaps = 19/162 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1005 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFILE 1064
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1065 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1120
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++M
Sbjct: 1121 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIM 1162
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 43/206 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA------IYILVHPLFSLFIITTILTNC 54
GKDIF ++A L P PI R +Y LV F IT ++ C
Sbjct: 1297 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGMVYDLVTK--QAFDITIMILIC 1354
Query: 55 ILMIMPGTPTIESTE----------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWL 104
+ M+ T + ++ ++F I+T E +K++A L + Y WN
Sbjct: 1355 LNMVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMLA----LRQY-YFTVGWNIF 1409
Query: 105 DFIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIE 153
DF+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++
Sbjct: 1410 DFVVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMM 1467
Query: 154 SVKNLRDVIILTMFSLSVFALMGLQD 179
S+ L ++ +L + ++++ G+ +
Sbjct: 1468 SLPALFNIGLLLFLVMFIYSIFGMSN 1493
>gi|355564940|gb|EHH21429.1| hypothetical protein EGK_04495 [Macaca mulatta]
Length = 1989
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 149/181 (82%), Gaps = 3/181 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMI 58
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSSTLFSMLIMCTILTNCIFMT 146
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT
Sbjct: 147 MSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEF 206
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 207 VNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 266
Query: 178 Q 178
Q
Sbjct: 267 Q 267
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1183 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1242
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1243 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1298
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1299 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1348
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 5/172 (2%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ +W P+ ++ +I++ P L I I+ N + M M P T E
Sbjct: 717 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 776
Query: 70 VIFTG--IYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAAL 126
V+ G ++ + Y + WN D +++ L+ V + + D+ L+ L
Sbjct: 777 VLAIGNLXXXXXXXXXXXXXXXAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVL 836
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 888
>gi|432850092|ref|XP_004066709.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oryzias latipes]
Length = 2009
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRF+AT AL++L PFNP+RR+AI +LVH +FS+ I+ TILTNC M +
Sbjct: 88 TFIVLNRGKAIFRFNATSALYILTPFNPLRRIAIRVLVHSMFSILIMFTILTNCAFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF L FT+L+D WNWLDF VI +AYVT +D
Sbjct: 148 SPPDWAKNVEYTFTGIYTFESLIKILARGFCLGKFTFLQDPWNWLDFSVILMAYVTEFVD 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ +W P + I+ V +++ P L I I+ N + M M P +
Sbjct: 719 YRFANKCLIWDCCPAWLKIKEVVSTVVMDPFVDLTITICIVLNTLFMAMEHYPMTNEFDN 778
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I+++L+ + +G+ ++
Sbjct: 779 VLSVGNLVFTGIFTAEMCLKIIA----LDPYYYFQQGWNIFDGIIVSLSLMELGLANVEG 834
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 835 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 890
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 1205 LRKTCFIIVEHNWFESFIIFMILLSSGALAFEDVYIEQRRTIKTVLEYADKVFTYVFILE 1264
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF+ Y +AW WLDF+++ ++ V++ +L + +LRT R LR
Sbjct: 1265 MLLKWVAYGFV----KYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALR 1320
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1321 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1370
>gi|395826075|ref|XP_003786245.1| PREDICTED: sodium channel protein type 4 subunit alpha [Otolemur
garnettii]
Length = 1824
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSIIRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVIVMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----LDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT ++ E
Sbjct: 1014 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYVFILE 1073
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1074 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1129
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1130 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1179
>gi|7021531|gb|AAF35390.1|AF225988_1 voltage-gated sodium channel alpha subunit [Homo sapiens]
Length = 1980
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 153/189 (80%), Gaps = 1/189 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+I+T+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMIMTVFCLSVFALIGLQL 272
Query: 180 SRGKKSDES 188
G+ S++
Sbjct: 273 FHGEPSNKC 281
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|426337576|ref|XP_004032777.1| PREDICTED: sodium channel protein type 9 subunit alpha-like,
partial [Gorilla gorilla gorilla]
Length = 1522
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/180 (65%), Positives = 150/180 (83%), Gaps = 3/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 60 -PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P T ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T +
Sbjct: 147 NPADWT-KNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFV 205
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 206 NLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1112 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1171
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1172 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1227
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1228 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1277
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 646 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 705
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 706 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 761
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 762 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 817
>gi|60265592|gb|AAW68222.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+++++KG IFRF+A AL++LDPFNPIR AI +L H LFS+FI+ TIL NC+ M M
Sbjct: 90 TYIILNKGNTIFRFTAAPALYMLDPFNPIRNGAIKVLTHSLFSMFIMITILANCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFE+ +KV+ARGF ++SFT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPIWAKDVEYTFTGIYTFEAMIKVLARGFCIDSFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALIGLQ 268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + I++ P L I I+ N + M M P E
Sbjct: 586 YKFAHAVLIWNCCPVWVKLKHIIKLIVLDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 645
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 646 VLNVGNLVFTGIFTAEMVLKLIA----LDPYEYFQIGWNIFDSIIVTLSLVELGLANVQG 701
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 702 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 757
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT ++ E
Sbjct: 1046 LRKACFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRHTIRTILEYADKIFTYVFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1106 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWIGYSELGAIKSLRTLRALR 1161
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1162 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1211
>gi|348540042|ref|XP_003457497.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Oreochromis niloticus]
Length = 1933
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+ IR +AI ILVH LFSLFI+ TILTNC M M
Sbjct: 87 TFIVLNKGKAIFRFSATSALYIFTPFHLIRAIAIKILVHSLFSLFIMFTILTNCFFMAMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
PT + E FTGIYTFESA+K++ARGF FT+LRD WNWLDF VI +AY+T +D
Sbjct: 147 DPPTWTKYLEYTFTGIYTFESAIKILARGFCTVPFTFLRDPWNWLDFTVIMMAYLTEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 265
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
+++ P L I I+ N + M + P + ++FTGI+T E +K++A
Sbjct: 717 MVMDPFLDLGITICIVLNTLFMALEHYPMTDEFNTMLSVGNLVFTGIFTAEMVLKLIA-- 774
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
++ + Y + WN D +++ L+ + +G+ ++ L+ LR+FR+LR K P L T+
Sbjct: 775 --MDPYYYFQQGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTL 832
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ ++ + +FA++G+Q
Sbjct: 833 IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 863
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +F+ I+ E
Sbjct: 1135 LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIEKRKVIKVVLEYADKVFSYIFVLE 1194
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y + W WLDF++ I+L ++G D + +LRT R LR
Sbjct: 1195 MFLKWIAYGFK----KYFTNYWCWLDFLIVDVSLISLVANSLGYSDFTAIKSLRTLRALR 1250
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1251 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1300
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I + F + I+ I+ N
Sbjct: 1402 GQDIFMTEEQKKYYNAMKKLGTKKPQKPIPRPTNIIQAFFFDLVSKQAFDIMIMMLIIVN 1461
Query: 54 CILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ E E ++F I+T E +K+ F L + + AWN DF
Sbjct: 1462 MVTMMVETDEQSERMESILNKINLVFIVIFTTECLIKI----FALRCY-FFTVAWNIFDF 1516
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+VI L+ V GI L ++ +R R+ R L+ + G++T++ A++ S+
Sbjct: 1517 VVIILSIV--GIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIRAAKGIRTLLFALMMSM 1574
Query: 156 KNLRDVIILTMFSLSVFALMGLQD-SRGKKSDESHD 190
L ++ +L + ++A+ G+ + + KK D D
Sbjct: 1575 PALFNIGLLLFLVMFIYAIFGMANFAYVKKQDGIDD 1610
>gi|348521366|ref|XP_003448197.1| PREDICTED: sodium channel protein type 8 subunit alpha-like
[Oreochromis niloticus]
Length = 1957
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 148/181 (81%), Gaps = 3/181 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT AL+++ PFNP+RR+AI IL+H PL + I+ TILTNCI M
Sbjct: 94 TFIVLNKGKTIFRFSATPALYLISPFNPVRRLAIKILIHSYPLKCMIIMCTILTNCIFMT 153
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P + E FTGIYTFES VK+ ARGF ++ FT+LRD WNWLDF+VI++AY+T
Sbjct: 154 FSDPPEWSKQVEYTFTGIYTFESLVKITARGFCIDGFTFLRDPWNWLDFMVISMAYITEF 213
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 214 VDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 273
Query: 178 Q 178
Q
Sbjct: 274 Q 274
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + I+ + I++ P L I I+ N + M M P E
Sbjct: 697 YKFANTFLIWECCPMWIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTSDFED 756
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++AWN D ++ L+ V + + D+
Sbjct: 757 MLSVGNLVFTGIFAGEMLFKLVA----MDPYYYFQEAWNCFDGFIVTLSLVELALADVEG 812
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 813 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 1206 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLVANALGYS 1261
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1262 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1321
Query: 179 DSRGK 183
GK
Sbjct: 1322 LFAGK 1326
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TE+ IF I+T
Sbjct: 1481 PQNKIQGMVFDFVTQQVFDISIMILICLNMVTMMVETDDQSDETEIVLYWVNFIFIVIFT 1540
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1541 TEFLLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1593
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1594 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1644
>gi|60265591|gb|AAW68221.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+++++KG IFRF+A AL++LDPFNPIR AI +L H LFS+FI+ TIL NC+ M M
Sbjct: 90 TYIILNKGNTIFRFTAAPALYMLDPFNPIRNGAIKVLTHSLFSMFIMITILANCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFE+ +KV+ARGF ++SFT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPIWAKDVEYTFTGIYTFEAMIKVLARGFCIDSFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALIGLQ 268
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + I++ P L I I+ N + M M P E
Sbjct: 586 YKFAHAVLIWNCCPVWVKLKHIIKLIVLDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 645
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 646 VLNVGNLVFTGIFTAEMVLKLIA----LDPYEYFQIGWNIFDSIIVTLSLVELGLANVQG 701
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA+MG+Q
Sbjct: 702 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVMGMQ 757
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT ++ E
Sbjct: 1046 LRKACFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRHTIRTILEYADKIFTYVFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1106 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1161
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1162 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1211
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
GKDIF ++A L P PI R + + F + I+ I N
Sbjct: 1336 GKDIFMTEEQKKYYNAMKKLGSKKPVKPIPRPQNKYQGMIFDFVTQQAFDIIIMILICLN 1395
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMA-RGFILESFTYLRDAWNWLD 105
+ M++ ++ ++F I+T E +K++A R + + + WN D
Sbjct: 1396 MVTMMVETDDQSQTKITILAQINLVFIIIFTSECLLKMIALRHY------FFTNGWNIFD 1449
Query: 106 FIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
F+V+ L+ V G+ L ++ +R R+ RAL+ + G++T++ A++ S
Sbjct: 1450 FVVVILSIV--GLVLSDIIEKYFVSPTLFRVIRLARIGRALRLIRGAKGIRTLLFALMMS 1507
Query: 155 VKNLRDVIILTMFSLSVFALMGLQD 179
+ L ++ +L + ++++ G+ +
Sbjct: 1508 LPALFNIGLLLFLVMFIYSIFGMSN 1532
>gi|327274282|ref|XP_003221907.1| PREDICTED: sodium channel protein type 5 subunit alpha-like,
partial [Anolis carolinensis]
Length = 568
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +LVH LFS+FI+ TILTNC+ M
Sbjct: 90 TFIVLNKGKTIFRFSATPALYILSPFHRIRRAAIKVLVHSLFSMFIMCTILTNCVFMAWS 149
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E IFTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ELPHWNKYIEYIFTGIYTFESMIKILARGFCMTEFTFLRDPWNWLDFCVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+++V GLKTIVGA+I+SV+ L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVVSGLKTIVGALIQSVRKLADVMILTVFCLSVFALIGLQ 268
>gi|403278722|ref|XP_003930941.1| PREDICTED: sodium channel protein type 5 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 2015
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-- 69
RF+ +W P + I++ ++++ P L I I+ N + M + E
Sbjct: 689 RFAQRYLIWECCPLWMSIKQGVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTSEFEDM 748
Query: 70 -----VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
>gi|44886084|dbj|BAD12085.1| TTX-resistant sodium channel splicing variant [Homo sapiens]
Length = 1962
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LR WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRGPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1140 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1200 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILTN 53
G+DIF ++AT L P PI R + Y I+ F + I+ I N
Sbjct: 1428 GQDIFMTEEQKKYYNATKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLN 1487
Query: 54 CILMIMP---GTPT----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ +P + ++F I+T E VK+ A L + Y ++WN DF
Sbjct: 1488 MVTMMVETDDQSPEKINILAKINLLFVAIFTGECIVKLAA----LRHY-YFTNSWNIFDF 1542
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G L ++ +R R+ R L+ + G++T++ A++ S+
Sbjct: 1543 VVVILSIV--GTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSL 1600
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1601 PALFNIGLLLFLVMFIYSIFGM 1622
>gi|44886082|dbj|BAD12084.1| TTX-resistant sodium channel [Homo sapiens]
Length = 2016
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LR WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRGPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|395843484|ref|XP_003794511.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Otolemur garnettii]
Length = 2018
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 13/186 (6%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST 68
RF+ +W P + I++ +++ P L I I+ N + M + T ES
Sbjct: 689 RFAQRYLIWECCPLWLSIKQKVKFLVTDPFADLAITMCIVLNTLFMALEHYNMTAEFESM 748
Query: 69 ----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMNNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 864
Query: 184 KSDESH 189
S++ H
Sbjct: 865 YSEQRH 870
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + T+ E + +FT ++ E
Sbjct: 1195 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEDRKTVKVLLEYADKMFTYVFVLE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1255 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1355
>gi|432959046|ref|XP_004086161.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Oryzias latipes]
Length = 1971
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L+++ PFN RR+AI IL+H LFS+ I+ TILTNCI M
Sbjct: 95 TFIVLNKGKTIFRFSATPSLYIISPFNLFRRIAIKILIHSLFSMIIMCTILTNCIFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES K++ARGF ++ FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 155 DPPEWSKQVEYTFTGIYTFESLTKIVARGFAIDDFTFLRDPWNWLDFMVISMAYVTEFVD 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + I+ + I++ P L I I+ N + M M P E E
Sbjct: 709 YKFANTFLIWECCPIWLKIKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEDFEG 768
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 769 VLSVGNLVFTGIFAGEMFAKLVA----MDPYYYFQEGWNCFDGFIVTLSLVELGLSDVEG 824
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 825 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 880
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ VT+
Sbjct: 1217 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVTLIANALGYS 1272
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1273 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1332
Query: 179 DSRGK 183
GK
Sbjct: 1333 LFAGK 1337
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TEV IF ++T
Sbjct: 1492 PQNKIQGMVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSDETEVVLYWINFIFIVVFT 1551
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1552 CEFVLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1604
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1605 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1655
>gi|402860595|ref|XP_003894711.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Papio anubis]
Length = 2016
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|449270912|gb|EMC81556.1| Sodium channel protein type 5 subunit alpha [Columba livia]
Length = 2044
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+PIRR AI IL+ LFS+FI+ TILTNC+ M
Sbjct: 90 TFIVLNKGKTIFRFSATPALYILSPFHPIRRAAIKILLFTLFSMFIMCTILTNCVFMAQS 149
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ETPSWNKYVEYTFTGIYTFESLIKILARGFCMTEFTFLRDPWNWLDFSVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 20 LWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIF 72
LW+L I++ ++++ P L I I+ N + M + + + ++F
Sbjct: 711 LWLL-----IKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFDHMLYIGNLVF 765
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRV 131
TGI+T E KV+A L+ + Y + WN D I++ L+ + +G+ +GNL+ LR+FR+
Sbjct: 766 TGIFTAEMIFKVIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRL 821
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 LRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + ++ + IFT I+ E
Sbjct: 1223 LRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLDYADKIFTYIFVLE 1282
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1283 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALR 1338
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1339 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1388
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + Y ++ +F + I+ I N
Sbjct: 1511 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFLFDVVSKQIFDVSIMILICLN 1570
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + ++F I+T E +K++A L + Y + WN DF
Sbjct: 1571 MVTMMVETDDQSQEKVNILHKINMLFVAIFTGECIIKMLA----LRHY-YFTNGWNIFDF 1625
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G L ++ +R R+ R L+ + G++T++ A++ S+
Sbjct: 1626 VVVILSIV--GTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSL 1683
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1684 PALFNIGLLLFLVMFIYAIFGMAN 1707
>gi|355564241|gb|EHH20741.1| Sodium channel protein type VIII subunit alpha [Macaca mulatta]
Length = 1980
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|325296795|ref|NP_001191637.1| sodium channel alpha-subunit SCAP1 [Aplysia californica]
gi|1842249|gb|AAC47457.1| sodium channel alpha-subunit SCAP1 [Aplysia californica]
Length = 1993
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+ K K IFRFSATDA+++L PFNPIRR+AIYILVHP+FSL ++ TIL NC+ M +
Sbjct: 99 TFVVLKKDKAIFRFSATDAIFLLSPFNPIRRIAIYILVHPIFSLLVMMTILVNCVFMAIT 158
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-D 119
E IF GIYT E+ VKV++RGF+L+ FTYLRD WNWLDF VI++AY+TM +
Sbjct: 159 SYTPPAFVEHIFLGIYTVEAVVKVLSRGFVLKPFTYLRDPWNWLDFFVISIAYMTMTVKS 218
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL ALRTFRVLRALKT++++PGLKTIVGA++E+V+ LRDV+ILT+F LS+FAL+G+Q
Sbjct: 219 FGNLQALRTFRVLRALKTISVIPGLKTIVGALLEAVRRLRDVMILTVFVLSIFALIGMQ 277
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 26/172 (15%)
Query: 42 FSLFIITTIL-TNCILMIMPG--------TPTIESTEVIFTGIYTFESAVKVMARGFILE 92
F FII IL ++C L + +E + +FT I+ E +K +A GF
Sbjct: 1180 FDSFIIAMILASSCALALEDAYLHEKPILKEILEYLDKVFTAIFIIEMLIKWLAFGFK-- 1237
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDL-------GNLA---ALRTFRVLRALKTVAIVP 142
TY DAW WLDF ++ L+ V + DL G+++ ++RT R LR L+ V+
Sbjct: 1238 --TYFTDAWCWLDFTIVMLSIVMLVADLTASEEGGGSMSWMKSMRTLRALRPLRAVSRWE 1295
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK---KSDESHDK 191
G++ +V A+ +++ ++ +V+++ + +F +MG+Q GK DE DK
Sbjct: 1296 GMRVVVNALFKAIPSICNVLLVCLVFWLIFGIMGVQLFNGKFHACRDEKGDK 1347
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 21 WVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIF 72
W P F ++R+ ++ LFI IL N M M + ++F
Sbjct: 734 WDCHPNFQKLQRLVSLFIMDAFVDLFITICILVNTAFMAMEHYDMEDDLKAVSNAANLVF 793
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRV 131
T I+ E+ +K++A L Y +D WN D I++AL+ + + + L L+ LR FR+
Sbjct: 794 TAIFAVEAFLKILA----LSPVIYFKDGWNIFDSIIVALSLMELSMTKLPGLSVLRAFRL 849
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR K P L ++ V ++ L ++II+ + +FA+MG Q
Sbjct: 850 LRVFKLAKSWPTLNMLIAIVGRTMGALGNLIIVLGIIIFIFAVMGQQ 896
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I+T E +K++ + Y + WN DF+V+ L+ + +
Sbjct: 1536 NLIFITIFTAECVLKLIGL-----RWYYFKIPWNVFDFVVVVLSILASSLSEFEDSFFIS 1590
Query: 123 ---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L +R FRV R L+ V G++T++ ++ S+ L ++ +L + ++A+MG+
Sbjct: 1591 PTLLRVIRVFRVGRVLRLVKSAKGIRTLLFSMAVSLPALFNIGLLLGLIMFIYAIMGMN 1649
>gi|348506762|ref|XP_003440926.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oreochromis niloticus]
Length = 2079
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRF+AT AL++L PFNP+RR+AI +LVH +FS+ I+ TILTNC M +
Sbjct: 152 TFIVLNRGKAIFRFNATPALYILSPFNPLRRIAIKVLVHSMFSILIMFTILTNCAFMTLS 211
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT +D
Sbjct: 212 NPPDWAKNVEYTFTGIYTFESLIKILARGFCVGKFTFLRDPWNWLDFSVILMAYVTEFVD 271
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 272 VGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 330
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P + I+ + +++ P L I I+ N + M M P + +
Sbjct: 788 YRFANTCLIWDCCPAWLKIKEIVSMVVMDPFVDLAITICIVLNTLFMAMEHYPMTKEFDN 847
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A L+ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 848 VLSVGNLVFTGIFTAEMCFKIIA----LDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 903
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 904 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 959
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 1275 LRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTVLEYADKVFTYVFILE 1334
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF+ Y +AW WLDF+++ ++ V++ +L + +LRT R LR
Sbjct: 1335 MLLKWVAYGFV----KYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALR 1390
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1391 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1440
>gi|119578602|gb|EAW58198.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_b
[Homo sapiens]
Length = 1980
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A+ V++ +LG + +LRT + L+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVFLVSLIANALGYSELGAIKSLRTLKALK 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LK ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLKALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|395540613|ref|XP_003772247.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 4
[Sarcophilus harrisii]
Length = 1734
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN +RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLLRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E+
Sbjct: 479 YKFANTFLIWECHPYWIKLKEIVNMIVMDPFVDLAITICIVLNTLFMAMEHHPMTPHFEN 538
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 539 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 594
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 595 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 650
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 941 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1000
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1001 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1056
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1057 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1106
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ V + F + I+ I N + M++ + E ++F +T
Sbjct: 1261 PLNNIQGVVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1320
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1321 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1373
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1374 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1426
>gi|395540607|ref|XP_003772244.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Sarcophilus harrisii]
Length = 1979
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN +RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLLRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E+
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNMIVMDPFVDLAITICIVLNTLFMAMEHHPMTPHFEN 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1186 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1245
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1246 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1301
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1302 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1351
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ V + F + I+ I N + M++ + E ++F +T
Sbjct: 1506 PLNNIQGVVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1565
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1566 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1618
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1619 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1671
>gi|81394314|gb|AAK55437.2| Nav1.4b [Sternopygus macrurus]
Length = 1829
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKGK I RF+A A +++ PFNPIRR AI L+H LFS+FI+ TIL+NC+ M M
Sbjct: 142 TFIVISKGKTINRFNAEPACYIISPFNPIRRAAIRTLIHSLFSMFIMVTILSNCVFMTMS 201
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VK+ +RGF + FT+LRD WNWLDF+VI++AY T +D
Sbjct: 202 NPPQWSKTAEYVFTGIYTFEALVKIFSRGFCVGDFTFLRDPWNWLDFMVISMAYTTEFVD 261
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 262 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLGDVMILTVFCLSVFALIGLQ 320
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ ++ +I++ P L I I+ N + M M P + E ++FTGI+T
Sbjct: 587 PWIKFKKWVHFIVMDPFVDLGITICIVLNTVFMAMEHYPMTQDFETVLITGNLVFTGIFT 646
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ ++ V +G+ ++ L+ LR+FR++R K
Sbjct: 647 AEMVLKIIA----MDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFK 702
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 703 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 744
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1013 RKTCFIIVEHNYFETFIIFMILLSSGALAFEDVYIEQRRVIKIILEYADQIFTYIFVVEM 1072
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF TY +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1073 LLKWVAYGFK----TYFTNAWCWLDFLIVDVSLISLTANILGYSELGPIKSLRTLRALRP 1128
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 LRALSRFEGMRVVVNALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGK 1177
>gi|395733990|ref|XP_002813974.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha [Pongo abelii]
Length = 2173
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 249 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 308
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 309 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 368
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 369 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 427
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1350 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1409
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1410 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1465
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1466 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1515
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 863 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 922
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 923 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 978
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 979 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 1016
>gi|363744970|ref|XP_003643162.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Gallus gallus]
Length = 1963
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 707 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 766
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 767 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 822
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 823 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 878
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1170 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1230 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
>gi|432959048|ref|XP_004086162.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Oryzias latipes]
Length = 1743
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L+++ PFN RR+AI IL+H LFS+ I+ TILTNCI M
Sbjct: 95 TFIVLNKGKTIFRFSATPSLYIISPFNLFRRIAIKILIHSLFSMIIMCTILTNCIFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES K++ARGF ++ FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 155 DPPEWSKQVEYTFTGIYTFESLTKIVARGFAIDDFTFLRDPWNWLDFMVISMAYVTEFVD 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + I+ + I++ P L I I+ N + M M P E E
Sbjct: 481 YKFANTFLIWECCPIWLKIKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEDFEG 540
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 541 VLSVGNLVFTGIFAGEMFAKLVA----MDPYYYFQEGWNCFDGFIVTLSLVELGLSDVEG 596
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 597 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 652
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ VT+
Sbjct: 989 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVTLIANALGYS 1044
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1045 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1104
Query: 179 DSRGK 183
GK
Sbjct: 1105 LFAGK 1109
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TEV IF ++T
Sbjct: 1264 PQNKIQGMVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSDETEVVLYWINFIFIVVFT 1323
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1324 CEFVLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1376
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1377 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1427
>gi|426249080|ref|XP_004018280.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha [Ovis aries]
Length = 1824
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVI 71
+W P + I++ ++++ P L I I+ N + M + ++ ++
Sbjct: 700 IWECSPLWMSIKQTVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEMLQVGNLV 759
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFR 130
FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL+ LR+FR
Sbjct: 760 FTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFR 815
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 816 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 863
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F F+I IL + + + TI E + +FT ++ E
Sbjct: 1200 LRKTCYRIVEHSWFETFVIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1259
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1260 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1315
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++M
Sbjct: 1316 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIM 1357
>gi|363729762|ref|XP_001232818.2| PREDICTED: sodium channel protein type 5 subunit alpha isoform 4
[Gallus gallus]
gi|342837679|tpg|DAA34929.1| TPA_inf: voltage-dependent sodium channel SCN10A [Gallus gallus]
Length = 2038
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L PF+P+RR AI IL+ LFS+FI+ TILTNC+ M
Sbjct: 90 TFVVLNKGKTIFRFSATPALYILSPFHPVRRAAIKILLFTLFSMFIMCTILTNCVFMAQS 149
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ETPSWNKYVEYTFTGIYTFESLIKILARGFCMTEFTFLRDPWNWLDFSVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 84/158 (53%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++ ++++ P L I I+ N + M + + + ++FTGI+T E
Sbjct: 715 IKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFDHMLYIGNLVFTGIFTAEMI 774
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
KV+A L+ + Y + WN D I++ L+ + +G+ +GNL+ LR+FR+LR K
Sbjct: 775 FKVIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKS 830
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1217 LRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLEYADKIFTYIFVLE 1276
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1277 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALR 1332
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1333 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1382
>gi|348560351|ref|XP_003465977.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha-like [Cavia porcellus]
Length = 1830
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 91 TFIVLNKGKAIFRFSATPALYMLSPFSVVRRGAIKVLIHSLFSMFIMITILTNCVFMTMS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 151 DPPPWSKNVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVILMAYVTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 269
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 549 PWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDNVLSVGNLVFTGIFT 608
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 609 AEMVLKLIA----LDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 664
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 665 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 706
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1010 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1069
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1070 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1125
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1126 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1175
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 43/206 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA------IYILVHPLFSLFIITTILTNC 54
GKDIF ++A L P PI R +Y V +F IT ++ C
Sbjct: 1297 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGXVYDFVTK--QVFDITIMILIC 1354
Query: 55 ILMIMPGTPTIESTEV----------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWL 104
+ M+ T + +++ IF I+T E +K+ F L + Y WN
Sbjct: 1355 LNMVTMMVETDDQSQLKVDILYNINMIFIVIFTGECVLKM----FALRQY-YFTIGWNIF 1409
Query: 105 DFIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIE 153
DF+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++
Sbjct: 1410 DFVVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMM 1467
Query: 154 SVKNLRDVIILTMFSLSVFALMGLQD 179
S+ L ++ +L + ++++ G+ +
Sbjct: 1468 SLPALFNIGLLLFLVMFIYSIFGMSN 1493
>gi|390476495|ref|XP_002807721.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha [Callithrix jacchus]
Length = 2016
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-- 69
RF+ +W P + +++ +++ P L I I+ N + M + E
Sbjct: 689 RFAQRFLIWECCPLWISVKQGVKFVVTDPFADLTITMCIVLNTLFMALEHYNMTSEFEDM 748
Query: 70 -----VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVVLSLMELGLSRMSNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>gi|260782826|ref|XP_002586482.1| hypothetical protein BRAFLDRAFT_249620 [Branchiostoma floridae]
gi|229271595|gb|EEN42493.1| hypothetical protein BRAFLDRAFT_249620 [Branchiostoma floridae]
Length = 1715
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 143/178 (80%), Gaps = 3/178 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VVSK +I RFSAT+ LW+L PF IR +A+YILVHP + ++ NC+ M M
Sbjct: 3 TFIVVSKKGEIARFSATNGLWLLSPFCTIRGLALYILVHP-YPFHVMGATFINCVFMTMT 61
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E TE +FTG+Y+FE VK++ARGFILE FTYLRDAWNWLDFIVI LAYVTM +DL
Sbjct: 62 APP--EMTEYVFTGVYSFEMIVKILARGFILEQFTYLRDAWNWLDFIVILLAYVTMFVDL 119
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNL+ALR FRVLRALKT+++VPGLKTIV A+IESVKNLRDVI+LT+F L+VF+L+ LQ
Sbjct: 120 GNLSALRAFRVLRALKTISVVPGLKTIVKALIESVKNLRDVILLTVFCLAVFSLLALQ 177
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 99/181 (54%), Gaps = 22/181 (12%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R A +I++H F FI+ IL + + + + P ++ + +F I+ E
Sbjct: 992 VRLKANFIVLHKYFETFIVGMILLSSLALAFEDIYLKDRPALQLGLNIADRLFAVIFCCE 1051
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA---LRTFRVLR 133
+K +A G+ Y +AW WLDF+++ ++ + +G + L NL+A +RT R LR
Sbjct: 1052 MLIKWIAFGYR----KYFTNAWCWLDFVIVMISLLGIGAEALGLSNLSAFRSMRTLRALR 1107
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG---KKSDESHD 190
L+ ++ G++ +V A+++++ ++ +V+++ + +FA+MG+Q G K DE++
Sbjct: 1108 PLRAISRAEGMRVVVNALVKAIPSIMNVLMVCLVFWLIFAIMGVQLFGGQFFKCVDENNK 1167
Query: 191 K 191
+
Sbjct: 1168 R 1168
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 18/164 (10%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTF 78
F + + ++ PL L I I+ N + M M ES E+ +FT I+
Sbjct: 549 FKRFQEILSLFVMDPLIDLLITLCIVLNTMFMAMDHYGKSESFELTLKTGNYVFTAIFAA 608
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKT 137
E +K++A G Y WN D I++ L+ +G++ + L+ LR+FR+LR K
Sbjct: 609 EFFLKLLALG----PAVYFSSGWNCFDAIIVILSLAELGLEGVQGLSVLRSFRLLRVFKL 664
Query: 138 VAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L +I+G+ I ++ NL ++ + ++ +FA++G+Q
Sbjct: 665 AKSWPTLNLLISIIGSSIGALGNLTFILGIVVY---IFAVIGMQ 705
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA 124
+E +IF ++TFE+ +K++ + + Y + WN DF+V+ ++ +G+ L +
Sbjct: 1354 LELINIIFIAVFTFEAVLKIIG-----QRWYYFKQPWNIFDFVVVVMS--LLGLILADFI 1406
Query: 125 A--------LRTFRVLRALKTVAIVPGLKTI 147
A LR RV R + + ++ G K I
Sbjct: 1407 AKYFVSPTLLRVVRVARIGRVLRLIRGAKGI 1437
>gi|296201811|ref|XP_002748166.1| PREDICTED: sodium channel protein type 4 subunit alpha [Callithrix
jacchus]
Length = 1774
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSMVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 NPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1019 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1078
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1079 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1134
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1135 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1184
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNXXXXHSLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+F +LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFPLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
>gi|363744968|ref|XP_003643161.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Gallus gallus]
Length = 1989
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 733 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 792
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 793 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 848
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 849 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 904
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1196 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1256 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|255522923|ref|NP_001157367.1| sodium channel protein type 5 subunit alpha [Equus caballus]
Length = 2019
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 689 RFAQRYLIWECCPLWMSIKQRVKFMVMDPFADLTITLCIVINTLFMALEHYNMTTEFEEM 748
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|281345252|gb|EFB20836.1| hypothetical protein PANDA_018637 [Ailuropoda melanoleuca]
Length = 2028
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 147/187 (78%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPL--------FSLFIITTILT 52
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH + + I+ TILT
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSYPFQVININYFMLIMCTILT 148
Query: 53 NCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
NC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI
Sbjct: 149 NCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITF 208
Query: 112 AYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSV
Sbjct: 209 AYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSV 268
Query: 172 FALMGLQ 178
FAL+GLQ
Sbjct: 269 FALIGLQ 275
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 746 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 805
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 806 VLAVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 861
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 862 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 917
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1214 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1273
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1274 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1329
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1330 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1379
>gi|449488397|ref|XP_004175387.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Taeniopygia guttata]
Length = 1980
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 782 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ +
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILK 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+ A GF+ + FT +AW WLDF++++++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLAWCAYGFV-KLFT---NAWCWLDFLIVSVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>gi|113676373|ref|NP_001038360.1| sodium channel protein type 2 subunit alpha [Danio rerio]
gi|76786315|gb|ABA54919.1| voltage-gated sodium channel type I alpha subunit Nav1.1Lb [Danio
rerio]
Length = 1996
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRF+AT AL++L PFNP+RR++I +LVH LFS I+ TILTNC M +
Sbjct: 91 TFIVLNRGKAIFRFNATPALYILSPFNPLRRISIRVLVHSLFSFVIMCTILTNCAFMTLS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT ++
Sbjct: 151 NPPEWAKNVEYTFTGIYTFESLIKILARGFCVGKFTFLRDPWNWLDFSVILMAYVTEFVN 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT------ 64
++F+ + +W P + ++ + I++ P L I I+ N + M M P
Sbjct: 713 YKFANSFLIWDCSPAWLKVKEIMNMIVMDPFVDLAITICIVLNTLFMAMEHYPMTTQFSH 772
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ ++FTGI+T E +KV+A L+ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 773 LLSVGNLVFTGIFTAEMCLKVIA----LDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 828
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 829 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 884
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 86/170 (50%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1188 LRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILE 1247
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ +L + +LRT R LR
Sbjct: 1248 MLLKWVAYGFA----KYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALR 1303
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1304 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1353
>gi|431894868|gb|ELK04661.1| Sodium channel protein type 1 subunit alpha [Pteropus alecto]
Length = 1943
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/187 (62%), Positives = 147/187 (78%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPL--------FSLFIITTILT 52
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH + + I+ TILT
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSYPFQVININYFMLIMCTILT 148
Query: 53 NCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
NC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI
Sbjct: 149 NCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITF 208
Query: 112 AYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSV
Sbjct: 209 AYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSV 268
Query: 172 FALMGLQ 178
FAL+GLQ
Sbjct: 269 FALIGLQ 275
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P +
Sbjct: 715 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNH 774
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 775 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1183 LRRTCFQIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1242
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A G+ TY +AW WLDF+++
Sbjct: 1243 MLLKWVAYGYQ----TYFTNAWCWLDFLIV 1268
>gi|363744966|ref|XP_003643160.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Gallus gallus]
Length = 1978
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 782 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>gi|6981514|ref|NP_037257.1| sodium channel protein type 5 subunit alpha isoform 1 [Rattus
norvegicus]
gi|116452|sp|P15389.1|SCN5A_RAT RecName: Full=Sodium channel protein type 5 subunit alpha; AltName:
Full=Sodium channel protein cardiac muscle subunit
alpha; AltName: Full=Sodium channel protein type V
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.5
gi|206858|gb|AAA42114.1| sodium channel alpha-subunit [Rattus norvegicus]
Length = 2019
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|354500745|ref|XP_003512458.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Cricetulus griseus]
Length = 1978
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T I+
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFIN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>gi|149018261|gb|EDL76902.1| rCG25073, isoform CRA_a [Rattus norvegicus]
Length = 2019
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|50950233|ref|NP_001002994.1| sodium channel protein type 5 subunit alpha [Canis lupus
familiaris]
gi|29691680|emb|CAD88248.1| voltage-gated sodium channel alpha subunit [Canis lupus familiaris]
Length = 2013
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 95/186 (51%), Gaps = 13/186 (6%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 687 RFAQRYLIWECCPLWMSIKQRVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 746
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 747 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 802
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 803 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 862
Query: 184 KSDESH 189
S++ H
Sbjct: 863 YSEQRH 868
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT I+ E
Sbjct: 1191 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYIFVLE 1250
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1251 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1306
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1307 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFAGK 1356
>gi|326936475|ref|XP_003214279.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
1 [Meleagris gallopavo]
Length = 1290
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 90 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 719 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 778
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 779 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 834
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 835 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 890
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1182 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
+K A GF+ + +AW WLDF+++A+
Sbjct: 1242 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVC 1270
>gi|403303789|ref|XP_003942505.1| PREDICTED: sodium channel protein type 4 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1835
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSVIRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1019 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1078
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1079 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1134
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1135 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1184
>gi|326936477|ref|XP_003214280.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Meleagris gallopavo]
Length = 1274
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 89 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 703 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 762
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 763 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 818
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 819 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 874
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1166 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1225
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
+K A GF+ + +AW WLDF+++A+
Sbjct: 1226 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVC 1254
>gi|410981514|ref|XP_003997113.1| PREDICTED: sodium channel protein type 4 subunit alpha [Felis
catus]
Length = 1834
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIIRRGAIKVLIHSLFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFDNVLTVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----LDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1017 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRTIRTILEYADKVFTYIFILE 1076
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1077 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1132
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1133 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1182
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I +V+ + +F IT ++ C+
Sbjct: 1304 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDCVTKQVFDITIMILICLN 1363
Query: 57 MIMPGTPTIESTEV----------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
M+ T + +++ +F I+T E +K++A L + Y WN DF
Sbjct: 1364 MVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMLA----LRQY-YFTVGWNIFDF 1418
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1419 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1476
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1477 PALFNIGLLLFLVMFIYSIFGMSN 1500
>gi|348507645|ref|XP_003441366.1| PREDICTED: sodium channel protein type 8 subunit alpha-like
[Oreochromis niloticus]
Length = 1970
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L+++ PFN RR+AI IL+H LFS+ I+ TILTNCI M
Sbjct: 95 TFIVLNKGKTIFRFSATPSLYIISPFNLFRRIAIKILIHSLFSMIIMCTILTNCIFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES K++ARGF ++ FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 155 DPPEWSKQVEYTFTGIYTFESLTKIVARGFAIDGFTFLRDPWNWLDFMVISMAYITEFVD 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P + ++ + I++ P L I I+ N + M M P TP E
Sbjct: 709 YKFANIFLIWECCPMWLKLKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFEE 768
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 769 VLSVGNLVFTGIFAGEMFAKLIA----MDPYYYFQEGWNCFDGFIVTLSLVELGLADVEG 824
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 825 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 880
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ VT+
Sbjct: 1216 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVTLIANALGYS 1271
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1272 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1331
Query: 179 DSRGK 183
GK
Sbjct: 1332 LFAGK 1336
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + +F + I+ I N + M++ E TE +F ++T
Sbjct: 1491 PQNKIQGMVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSEETENVLYWVNFVFIVVFT 1550
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1551 CEFVLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1603
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1604 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1654
>gi|47228731|emb|CAG07463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1983
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 147/181 (81%), Gaps = 3/181 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT AL+ + PFNP+RRVAI IL+H PL + I+ TILTNCI M
Sbjct: 94 TFIVLNKGKTIFRFSATSALYFISPFNPVRRVAIKILIHSYPLTRMIIMCTILTNCIFMT 153
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P + E FTGIYTFES VK+ ARGF ++ FT+LRD WNWLDF+VI++AY+T
Sbjct: 154 FSDPPEWSKQVEYTFTGIYTFESLVKITARGFCIDDFTFLRDPWNWLDFMVISMAYITEF 213
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 214 VNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 273
Query: 178 Q 178
Q
Sbjct: 274 Q 274
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 708 YKFANTFLIWECSPKWIKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEH 767
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++AWN D ++ L+ V + + D+
Sbjct: 768 MLSVGNLVFTGIFAGEMLFKLVA----MDPYYYFQEAWNCFDGFIVTLSLVELALADVEG 823
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 824 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 879
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 1217 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLVANALGYS 1272
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1273 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1332
Query: 179 DSRGK 183
GK
Sbjct: 1333 LFAGK 1337
>gi|237512985|ref|NP_001153634.1| sodium channel protein type 5 subunit alpha isoform 2 [Rattus
norvegicus]
gi|13774490|gb|AAK38884.1| sodium channel Nav1.5a [Rattus norvegicus]
Length = 1966
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1143 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1203 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1308
>gi|149018262|gb|EDL76903.1| rCG25073, isoform CRA_b [Rattus norvegicus]
Length = 1966
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1143 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1203 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1308
>gi|403258865|ref|XP_003921963.1| PREDICTED: sodium channel protein type 9 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1977
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+A AL++L PF+P+R+++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKTIFRFNAAPALYMLSPFSPLRKISIKILVHSLFSMLIMCTILTNCIFMTLY 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT ++ E
Sbjct: 1170 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYVFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1230 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P + ++ +I++ P L I I+ N + M M P E
Sbjct: 704 YRFAHKFLIWNCSPHWIKFKKCVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLTIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|148677260|gb|EDL09207.1| mCG126205 [Mus musculus]
Length = 2019
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|297701530|ref|XP_002827758.1| PREDICTED: sodium channel protein type 4 subunit alpha [Pongo
abelii]
Length = 1834
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF +++FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDNFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 561 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 620
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 621 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 676
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 677 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 718
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1018 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1077
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1078 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1133
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1134 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1183
>gi|6782382|emb|CAB70096.1| voltage-gated sodium channel [Mus musculus]
Length = 2019
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|301778289|ref|XP_002924556.1| PREDICTED: sodium channel protein type 4 subunit alpha-like
[Ailuropoda melanoleuca]
Length = 1816
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSA AL++L PF+ IRR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSAAPALYMLSPFSIIRRSAIKVLIHSLFSMFIMVTILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 545 PWVKFKSIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 604
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 605 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 660
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 661 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 702
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT ++ E
Sbjct: 999 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYVFILE 1058
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1059 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1114
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1115 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1164
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I +V+ + F IT ++ C+
Sbjct: 1286 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDCVTKQAFDITIMILICLN 1345
Query: 57 MIMPGTPTIESTEV----------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
M+ T + +++ +F I+T E A+K++A L + Y WN DF
Sbjct: 1346 MVTMMVETDDQSQLKVDILYNINMVFIIIFTGECALKMLA----LRQY-YFTVGWNIFDF 1400
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1401 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1458
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1459 PALFNIGLLLFLVMFIYSIFGMSN 1482
>gi|359718971|ref|NP_001240789.1| sodium channel protein type 5 subunit alpha isoform 2 [Mus
musculus]
Length = 2020
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|341942012|sp|Q9JJV9.2|SCN5A_MOUSE RecName: Full=Sodium channel protein type 5 subunit alpha; AltName:
Full=Sodium channel protein cardiac muscle subunit
alpha; AltName: Full=Sodium channel protein type V
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.5; AltName: Full=mH1
Length = 2019
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>gi|73965379|ref|XP_853396.1| PREDICTED: sodium channel protein type 4 subunit alpha [Canis lupus
familiaris]
Length = 1837
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ IFRFSAT AL++L PF+ IRR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGRAIFRFSATPALYMLSPFSIIRRGAIKVLIHSLFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWMKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRSILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|301772386|ref|XP_002921606.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Ailuropoda melanoleuca]
Length = 1977
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 721 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 780
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 781 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 836
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 892
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1184 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1244 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1504 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1563
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1564 CECVLKM----FALRHY-YFTVGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1616
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1617 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1669
>gi|74177355|dbj|BAE34580.1| unnamed protein product [Mus musculus]
Length = 804
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
>gi|119614631|gb|EAW94225.1| sodium channel, voltage-gated, type IV, alpha, isoform CRA_a [Homo
sapiens]
Length = 1836
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|109116864|ref|XP_001116451.1| PREDICTED: sodium channel protein type 4 subunit alpha [Macaca
mulatta]
Length = 1837
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSLVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 564 PWMKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDHVLTVGNLVFTGIFT 623
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 624 AEMDLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 679
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 680 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 721
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1021 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1080
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1081 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1136
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1137 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1186
>gi|908809|gb|AAA75557.1| sodium channel alpha subunit [Homo sapiens]
Length = 1835
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|344285646|ref|XP_003414571.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha-like, partial [Loxodonta africana]
Length = 1732
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSA AL+VL PF+ IRR AI +L+H LFS+FI+ TIL+NC+ M M
Sbjct: 18 TFIVLNKGKAIFRFSAAPALYVLSPFSSIRRGAIKVLIHSLFSMFIMITILSNCVFMTMS 77
Query: 61 GTPTI-ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 78 DPPPWSKNVEYTFTGIYTFESLIKILARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 137
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 138 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 196
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + + P I E + +FT I+ E
Sbjct: 915 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIHIEQRPVIRTILEYADKVFTYIFIIE 974
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 975 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1030
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1031 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1080
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 43/206 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA------IYILVHPLFSLFIITTILTNC 54
GKDIF ++A L P PI R +Y LV F IT ++ C
Sbjct: 1202 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMLYDLVTK--QAFDITIMILIC 1259
Query: 55 ILMIMPGTPTIESTE----------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWL 104
+ M+ T + ++ +IF I+T E +K++A L + Y WN
Sbjct: 1260 LNMVTMMVETDDQSQLKVDILYNINMIFIVIFTGECVLKMLA----LRQY-YFTVGWNIF 1314
Query: 105 DFIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIE 153
DF+V+ L+ V G+ L L +R R+ R L+ + G++T++ A++
Sbjct: 1315 DFVVVILSIV--GLALSELIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMM 1372
Query: 154 SVKNLRDVIILTMFSLSVFALMGLQD 179
S+ L ++ +L + ++++ G+ +
Sbjct: 1373 SLPALFNIGLLLFLVMFIYSIFGMSN 1398
>gi|332206180|ref|XP_003252169.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Nomascus leucogenys]
Length = 1980
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|441662642|ref|XP_004091628.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha [Nomascus leucogenys]
Length = 1810
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 88/171 (51%), Gaps = 20/171 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLK-TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1186
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I +V+ L + F IT ++ C+
Sbjct: 1308 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDLVTKQAFDITIMILICLN 1367
Query: 57 MIMPGTPTIESTEV----------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
M+ T + +++ IF ++T E +K++ L + Y WN DF
Sbjct: 1368 MVTMMVETDDQSQLKVDILYNINMIFIIVFTGECVLKMLX----LRQY-YFTVGWNIFDF 1422
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1423 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1480
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1481 PALFNIGLLLFLVMFIYSIFGMSN 1504
>gi|93587342|ref|NP_000325.4| sodium channel protein type 4 subunit alpha [Homo sapiens]
gi|292495096|sp|P35499.4|SCN4A_HUMAN RecName: Full=Sodium channel protein type 4 subunit alpha; AltName:
Full=SkM1; AltName: Full=Sodium channel protein skeletal
muscle subunit alpha; AltName: Full=Sodium channel
protein type IV subunit alpha; AltName:
Full=Voltage-gated sodium channel subunit alpha Nav1.4
gi|225000136|gb|AAI72375.1| Sodium channel, voltage-gated, type IV, alpha subunit [synthetic
construct]
Length = 1836
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|354500749|ref|XP_003512460.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Cricetulus griseus]
Length = 1937
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T I+
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFIN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1272
>gi|117414174|ref|NP_001070967.1| sodium channel protein type 8 subunit alpha isoform 1 [Mus
musculus]
Length = 1978
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>gi|410964453|ref|XP_003988769.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Felis catus]
Length = 1980
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|395532896|ref|XP_003768502.1| PREDICTED: sodium channel protein type 4 subunit alpha [Sarcophilus
harrisii]
Length = 1812
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR+AI IL+H LFSLFI+ TIL NC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSGIRRLAIKILIHSLFSLFIMITILANCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K+++RGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 EPPPWSKNVEYTFTGIYTFESLIKMLSRGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 MGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIEST----EVIFTGIYT 77
P+ ++++ I++ P L I I+ N + M M P TP E ++FTGI+T
Sbjct: 547 PWVKLKKILHLIVMDPFVDLGITICIVLNTVFMAMEHYPMTPEFEHVLTVGNLVFTGIFT 606
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR++R K
Sbjct: 607 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLMRVFK 662
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 663 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 704
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ ++ H F FI+ IL + + +E + +F+ ++ E
Sbjct: 1001 LRKACFRMVEHNWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYVFVLE 1060
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1061 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGAIKSLRTLRALR 1116
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1117 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1166
>gi|441620273|ref|XP_004088657.1| PREDICTED: sodium channel protein type 8 subunit alpha [Nomascus
leucogenys]
Length = 1981
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 725 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 784
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 785 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 840
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 841 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 896
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1188 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1247
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1248 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1303
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1304 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1353
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1508 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1567
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1568 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1620
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1621 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1673
>gi|338213|gb|AAA60554.1| sodium channel alpha subunit [Homo sapiens]
Length = 1836
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|345791969|ref|XP_003433569.1| PREDICTED: sodium channel protein type 8 subunit alpha [Canis lupus
familiaris]
Length = 1939
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1466 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|327264337|ref|XP_003216970.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
4 [Anolis carolinensis]
Length = 1938
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRDAWNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDAWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANVVLIWECHPYWLKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPAFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGN 122
++FTGI+ E +K++A ++ + Y ++ WN D +++L+ + M D+
Sbjct: 784 VLAVGNLVFTGIFAAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLLELMLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTCLEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWCAYGFV----KFFTNAWCWLDFLIVAV 1274
>gi|296204644|ref|XP_002749416.1| PREDICTED: sodium channel protein type 9 subunit alpha [Callithrix
jacchus]
Length = 1977
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+A AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKTIFRFNAAPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTLY 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPEWTKIVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT ++ E
Sbjct: 1170 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYVFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1230 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P + ++ +I++ P L I I+ N + M M P E
Sbjct: 704 YRFAHKFLIWNCSPHWIKFKKCVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 763
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 764 VLTIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
>gi|31788956|gb|AAO83647.1| skeletal muscle voltage-dependent sodium channel type IV alpha
subunit [Homo sapiens]
Length = 1836
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|300797151|ref|NP_001180031.1| sodium channel protein type 8 subunit alpha [Bos taurus]
gi|296487893|tpg|DAA30006.1| TPA: sodium channel, voltage gated, type VIII, alpha subunit [Bos
taurus]
Length = 1980
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|327264333|ref|XP_003216968.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
2 [Anolis carolinensis]
Length = 1979
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRDAWNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDAWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTCLEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANVVLIWECHPYWLKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPAFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGN 122
++FTGI+ E +K++A ++ + Y ++ WN D +++L+ + M D+
Sbjct: 784 VLAVGNLVFTGIFAAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLLELMLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
>gi|291389171|ref|XP_002711237.1| PREDICTED: voltage-gated sodium channel alpha subunit-like isoform
2 [Oryctolagus cuniculus]
Length = 1980
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLTVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRRTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|73996384|ref|XP_850134.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Canis lupus familiaris]
Length = 1980
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|311268677|ref|XP_003132154.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
1 [Sus scrofa]
Length = 2020
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 692 RFAQRYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|243989|gb|AAB21221.1| sodium channel alpha subunit [human, skeletal muscle, Peptide, 1836
aa]
Length = 1836
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|410964457|ref|XP_003988771.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Felis catus]
Length = 1939
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1466 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|426347189|ref|XP_004041241.1| PREDICTED: sodium channel protein type 4 subunit alpha [Gorilla
gorilla gorilla]
Length = 1836
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|343098408|tpg|DAA34935.1| TPA_inf: voltage-dependent sodium channel SCN8A [Anolis
carolinensis]
Length = 1973
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 89 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRDAWNWLDF VI +AY+T ++
Sbjct: 149 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDAWNWLDFSVIMMAYITEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1182 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTCLEYADKVFTYIFILE 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1242 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1297
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1298 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1347
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 719 YKFANVVLIWECHPYWLKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPAFEH 778
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGN 122
++FTGI+ E +K++A ++ + Y ++ WN D +++L+ + M D+
Sbjct: 779 VLAVGNLVFTGIFAAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLLELMLADVEG 834
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 835 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 890
>gi|426224456|ref|XP_004006386.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Ovis aries]
Length = 1977
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 721 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 780
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 781 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 836
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 892
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1184 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1244 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1504 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1563
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1564 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1616
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1617 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1669
>gi|292487|gb|AAB59624.1| skeletal muscle sodium channel alpha subunit [Homo sapiens]
Length = 1836
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V ++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVKPLLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|332848894|ref|XP_003315741.1| PREDICTED: sodium channel protein type 4 subunit alpha [Pan
troglodytes]
Length = 1697
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALR 127
E +FTGI+T E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR
Sbjct: 477 EAVFTGIFTAEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLR 532
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 533 SFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 583
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 883 LRRACFTIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 942
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 943 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 998
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTM 166
L+ ++ G++ VGA S +L D L +
Sbjct: 999 PLRALSRFEGMR--VGAEGASGPSLIDNAQLCL 1029
>gi|311268683|ref|XP_003132159.1| PREDICTED: sodium channel protein type 5 subunit alpha-like isoform
6 [Sus scrofa]
Length = 1967
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 692 RFAQRYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1144 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1204 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
>gi|402900772|ref|XP_003913341.1| PREDICTED: sodium channel protein type 4 subunit alpha [Papio
anubis]
Length = 1778
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSLVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 962 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1021
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1022 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1077
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1078 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1127
>gi|355786104|gb|EHH66287.1| Sodium channel protein type VIII subunit alpha [Macaca
fascicularis]
Length = 1976
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 721 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 780
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 781 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 836
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 892
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1184 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1244 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1503 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1562
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1563 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1615
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1616 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1668
>gi|355750587|gb|EHH54914.1| hypothetical protein EGM_04021 [Macaca fascicularis]
Length = 1989
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 148/181 (81%), Gaps = 3/181 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMI 58
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSSTLFSMLIMCTILTNCIFMT 146
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI A+VT
Sbjct: 147 MSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAFVTEF 206
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++LGN +ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 207 VNLGNFSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 266
Query: 178 Q 178
Q
Sbjct: 267 Q 267
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1183 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1242
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1243 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1298
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1299 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1348
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 717 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 776
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 777 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 832
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 833 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 888
>gi|348556692|ref|XP_003464155.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 6
[Cavia porcellus]
Length = 1961
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 685 RFAKRYLIWECCPLWISIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 744
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 745 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 800
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 801 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 855
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1138 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1197
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1198 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1253
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1254 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1303
>gi|296211699|ref|XP_002752529.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Callithrix jacchus]
Length = 1938
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 723 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 782
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 783 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 838
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 839 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 894
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1186 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1245
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1246 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1273
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1465 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1524
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1525 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1577
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1578 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1630
>gi|410971648|ref|XP_003992277.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha [Felis catus]
Length = 2017
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH FS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSFFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 688 RFAQRYLIWECCPLWMSIKQRVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 747
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 748 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQXGWNIFDSIIVILSLMELGLSRMGNL 803
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 804 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 858
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>gi|344267968|ref|XP_003405836.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Loxodonta africana]
Length = 1939
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E +F +T
Sbjct: 1466 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L +L +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADLIERYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|301772388|ref|XP_002921607.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Ailuropoda melanoleuca]
Length = 1936
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 721 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 780
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 781 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 836
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 892
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1184 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1244 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1271
Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1463 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1522
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1523 CECVLKM----FALRHY-YFTVGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1575
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1576 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1628
>gi|222537873|gb|ACM63162.1| monocyte-macrophage NaV1.6 splice variant [Homo sapiens]
Length = 1939
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1466 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|344267966|ref|XP_003405835.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Loxodonta africana]
Length = 1980
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E +F +T
Sbjct: 1507 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L +L +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADLIERYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|295789135|ref|NP_001171455.1| sodium channel protein type 8 subunit alpha isoform 2 [Homo
sapiens]
gi|397522123|ref|XP_003831128.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Pan paniscus]
gi|426372569|ref|XP_004053195.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Gorilla gorilla gorilla]
gi|410215094|gb|JAA04766.1| sodium channel, voltage gated, type VIII, alpha subunit [Pan
troglodytes]
Length = 1939
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1466 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|291415629|ref|XP_002724054.1| PREDICTED: sodium channel, voltage-gated, type V, alpha subunit
[Oryctolagus cuniculus]
Length = 1900
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LFSL I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYLLSPFHPIRRAAVKILVHSLFSLLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYAFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVIAGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRT 128
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL+ LR+
Sbjct: 700 AVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRS 755
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDES 188
FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q S++
Sbjct: 756 FRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYSEQR 815
Query: 189 H 189
H
Sbjct: 816 H 816
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 1140 LRKTCYRIVEHSWFESFIIFMILLSSGALAFEDIYLEERKAIKALLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y AW WLDF+++A++ V T+G ++G + +LRT R LR
Sbjct: 1200 MVLKWVAYGFK----KYFTSAWCWLDFLIVAVSLVSLVANTLGFSEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
>gi|109096715|ref|XP_001090295.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Macaca mulatta]
Length = 1980
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|297262393|ref|XP_002798632.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Macaca mulatta]
Length = 1939
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1466 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|7657544|ref|NP_055006.1| sodium channel protein type 8 subunit alpha isoform 1 [Homo
sapiens]
gi|397522121|ref|XP_003831127.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Pan paniscus]
gi|426372567|ref|XP_004053194.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Gorilla gorilla gorilla]
gi|34098756|sp|Q9UQD0.1|SCN8A_HUMAN RecName: Full=Sodium channel protein type 8 subunit alpha; AltName:
Full=Sodium channel protein type VIII subunit alpha;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.6
gi|4958860|dbj|BAA78033.1| sodium channel [Homo sapiens]
Length = 1980
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>gi|426372575|ref|XP_004053198.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 5
[Gorilla gorilla gorilla]
Length = 1981
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 725 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 784
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 785 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 840
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 841 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 896
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1188 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1247
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1248 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1303
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1304 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1353
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1508 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1567
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1568 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1620
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1621 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1673
>gi|296211697|ref|XP_002752528.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 1
[Callithrix jacchus]
Length = 1979
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 723 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 782
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 783 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 838
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 839 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 894
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1186 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1245
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1246 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1301
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1302 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1351
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1506 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1565
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1566 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1618
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1619 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1671
>gi|348556682|ref|XP_003464150.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Cavia porcellus]
Length = 2014
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 685 RFAKRYLIWECCPLWISIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 744
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 745 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 800
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 801 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 855
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1191 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1250
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1251 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1306
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1307 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1356
>gi|332206182|ref|XP_003252170.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Nomascus leucogenys]
Length = 1939
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1274
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1466 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1525
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1526 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1578
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1579 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1631
>gi|60265593|gb|AAW68223.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+++++KG IFRF+A AL++LDPFNPIR AI +L H LFS+FI+ TIL NC+ M M
Sbjct: 90 TYIILNKGNTIFRFTAAPALYMLDPFNPIRNGAIKVLTHSLFSMFIMITILANCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFE+ +KV+ RGF ++SFT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPIWAKDVEYTFTGIYTFEAMIKVLTRGFCIDSFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALIGLQ 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + I++ P L I I+ N + M M P E
Sbjct: 586 YKFAHAVLIWNCCPVWVKLKHIIKLIVLDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 645
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 646 VLNVGNLVFTGIFTAEMVLKLIA----LDPYEYFQIGWNIFDSIIVTLSLVELGLANVQG 701
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 702 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 757
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT ++ E
Sbjct: 1046 LRKACFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRHTIRTILEYADKIFTYVFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1106 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1161
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1162 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1211
>gi|397480255|ref|XP_003811402.1| PREDICTED: sodium channel protein type 4 subunit alpha [Pan
paniscus]
Length = 1836
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+F++ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFVMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|432959050|ref|XP_004086163.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Oryzias latipes]
Length = 1971
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L+++ PFN RR+AI IL+H LFS+ I+ TILTNCI M
Sbjct: 95 TFIVLNKGKTIFRFSATPSLYIISPFNLFRRIAIKILIHSLFSMIIMCTILTNCIFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES K++ARGF ++ FT+LRD WNWLDF+VI++AYVT ++
Sbjct: 155 DPPEWSKQVEYTFTGIYTFESLTKIVARGFAIDDFTFLRDPWNWLDFMVISMAYVTEFVN 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + I+ + I++ P L I I+ N + M M P E E
Sbjct: 709 YKFANTFLIWECCPIWLKIKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEDFEG 768
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 769 VLSVGNLVFTGIFAGEMFAKLVA----MDPYYYFQEGWNCFDGFIVTLSLVELGLSDVEG 824
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 825 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 880
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ VT+
Sbjct: 1217 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVTLIANALGYS 1272
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1273 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1332
Query: 179 DSRGK 183
GK
Sbjct: 1333 LFAGK 1337
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TEV IF ++T
Sbjct: 1492 PQNKIQGMVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSDETEVVLYWINFIFIVVFT 1551
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1552 CEFVLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1604
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1605 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1655
>gi|432959052|ref|XP_004086164.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
4 [Oryzias latipes]
Length = 1930
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L+++ PFN RR+AI IL+H LFS+ I+ TILTNCI M
Sbjct: 95 TFIVLNKGKTIFRFSATPSLYIISPFNLFRRIAIKILIHSLFSMIIMCTILTNCIFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES K++ARGF ++ FT+LRD WNWLDF+VI++AYVT ++
Sbjct: 155 DPPEWSKQVEYTFTGIYTFESLTKIVARGFAIDDFTFLRDPWNWLDFMVISMAYVTEFVN 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + I+ + I++ P L I I+ N + M M P E E
Sbjct: 709 YKFANTFLIWECCPIWLKIKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEDFEG 768
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 769 VLSVGNLVFTGIFAGEMFAKLVA----MDPYYYFQEGWNCFDGFIVTLSLVELGLSDVEG 824
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 825 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 880
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYT 77
P N I+ + + +F + I+ I N + M++ + TEV IF ++T
Sbjct: 1451 PQNKIQGMVFDFVTQQVFDISIMMLICLNMVTMMVETDDQSDETEVVLYWINFIFIVVFT 1510
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y + WN D +V+ L+ V G+ L +L +
Sbjct: 1511 CEFVLKL----FALRHY-YFTNGWNIFDVVVVILSIV--GMFLADLIEKYFVSPTLFRVI 1563
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1564 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM 1614
>gi|432950658|ref|XP_004084549.1| PREDICTED: sodium channel protein type 4 subunit alpha B-like
[Oryzias latipes]
Length = 2509
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG I+RF+A A +VL PFNP+R +I IL+H LFSLFI+ TILTNC+ M M
Sbjct: 91 TFIVLSKGNIIYRFNAEPACYVLTPFNPLRIFSIRILIHSLFSLFIMLTILTNCVFMTMS 150
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + +FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 151 DPPAWSKTVEYLFTGIYTFEAIVKVLSRGFCIGNFTFLRDPWNWLDFMVISMAYLTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLGDVMVLTVFCLSVFALIGLQ 269
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
RR I+ H F FII IL + + +E + +FT ++ E
Sbjct: 1698 RRTCFSIVEHNYFETFIIFMILMSSGALAFEDIYMEQRRVIKTILEYADQVFTYVFVVEM 1757
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1758 LLKWVAYGFT----TYFTNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRP 1813
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G+K +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1814 LRALSRFEGMKVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1862
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 87/161 (54%), Gaps = 18/161 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++++ I++ P L I I+ N + M M P E+ E ++FTGI+T E
Sbjct: 1272 LKQLLYTIVMDPFVDLTITICIVLNTVFMAMEHYPMTENFEELLSIGNLVFTGIFTAEMV 1331
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+K++A L+ + Y + WN D I++ ++ V +G+ D+ L+ LR+FR++R K
Sbjct: 1332 LKLLA----LDPYYYFQVGWNIFDSIIVTMSLVELGLADVEGLSVLRSFRLMRVFKLAKS 1387
Query: 141 VPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L I+G I ++ NL V+ + +F +FA++G+Q
Sbjct: 1388 WPTLNMLIKIIGNSIGALGNLTLVLAIIVF---IFAVVGMQ 1425
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIEST------EVIFTGIYT 77
P N + + ++ F +FI+ I N + +M+ T+E ++F I+T
Sbjct: 2017 PENHFQGLVFDLVTKQFFDIFIMVLICLNMVTMMVETDDQTLEKEIILYWVNLVFIVIFT 2076
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E ++K++A L Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 2077 TECSLKIIA----LRQH-YFAVGWNIFDFVVVILSIV--GLLLADIIEKYFVSPTLFRVI 2129
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 2130 RLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 2182
>gi|146048457|gb|ABQ01244.1| sodium channel protein type V alpha subunit [Homo sapiens]
Length = 2016
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|15072487|gb|AAK74065.1| voltage-gated sodium channel type V alpha subunit jejunal variant
[Homo sapiens]
Length = 2015
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|426339978|ref|XP_004033912.1| PREDICTED: sodium channel protein type 5 subunit alpha isoform 1
[Gorilla gorilla gorilla]
Length = 2015
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|30089970|ref|NP_000326.2| sodium channel protein type 5 subunit alpha isoform b [Homo
sapiens]
gi|24559815|gb|AAN61120.1| cardiac sodium channel alpha subunit Nav1.5 [Homo sapiens]
gi|124302208|gb|ABN05288.1| sodium channel, voltage-gated, type V, alpha (long QT syndrome 3)
[Homo sapiens]
Length = 2015
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|37622907|ref|NP_932173.1| sodium channel protein type 5 subunit alpha isoform a [Homo
sapiens]
gi|215273881|sp|Q14524.2|SCN5A_HUMAN RecName: Full=Sodium channel protein type 5 subunit alpha; AltName:
Full=HH1; AltName: Full=Sodium channel protein cardiac
muscle subunit alpha; AltName: Full=Sodium channel
protein type V subunit alpha; AltName:
Full=Voltage-gated sodium channel subunit alpha Nav1.5
gi|260158894|gb|ACX32327.1| voltage-gated sodium channel type V alpha isoform a [synthetic
construct]
Length = 2016
Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|397511556|ref|XP_003826137.1| PREDICTED: sodium channel protein type 5 subunit alpha [Pan
paniscus]
Length = 2015
Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|60265594|gb|AAW68224.1| voltage-gated sodium channel type IV alpha subunit [Thamnophis
sirtalis]
Length = 1875
Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+++++KG IFRF+A AL++LDPFNPIR AI +L H LFS+FI+ TIL NC+ M M
Sbjct: 90 TYIILNKGNTIFRFTAAPALYMLDPFNPIRNGAIKVLTHSLFSMFIMITILANCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFE+ +KV+ARGF ++S T+LRD WNWLDF VI +AYVT +D
Sbjct: 150 NPPIWAKDVEYTFTGIYTFEAMIKVLARGFCIDSLTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALIGLQ 268
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + ++ + I++ P L I I+ N + M M P E
Sbjct: 586 YKFAHAVLIWNCCPVWVKLKHIIKLIVLDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 645
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 646 VLNVGNLVFTGIFTAEMVLKLIA----LDPYEYFQIGWNIFDSIIVTLSLVELGLANVQG 701
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 702 LSVLRSFRLMRVSKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 757
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT ++ E
Sbjct: 1046 LRKACFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRHTIRTILEYADKIFTYVFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1106 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1161
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1162 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1211
>gi|29569618|gb|AAO91669.1|AF482988_1 cardiac sodium channel alpha subunit [Homo sapiens]
Length = 2015
Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|431894869|gb|ELK04662.1| Sodium channel protein type 9 subunit alpha [Pteropus alecto]
Length = 1964
Score = 235 bits (599), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILV LF + I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVPTLFGMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1178 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIDIEKKKTIKIILEYADKIFTYIFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1238 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIRSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1343
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E
Sbjct: 713 YRFAHTFLIWNCSPYWIKFKKLIDFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKS 772
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 773 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLSDVDG 828
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 829 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 884
>gi|395540611|ref|XP_003772246.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 3
[Sarcophilus harrisii]
Length = 1938
Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN +RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLLRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E+
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNMIVMDPFVDLAITICIVLNTLFMAMEHHPMTPHFEN 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ V + F + I+ I N + M++ + E ++F +T
Sbjct: 1465 PLNNIQGVVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1524
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1525 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1577
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1578 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1630
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1186 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1245
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1246 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1273
>gi|345328068|ref|XP_001513667.2| PREDICTED: sodium channel protein type 9 subunit alpha
[Ornithorhynchus anatinus]
Length = 1982
Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSAT AL++L PFN +R+++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 88 TFIVLNRGKTIFRFSATPALYILSPFNLLRKISIKILVHSLFSMLIMCTILTNCIFMTLS 147
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF + FT+LRD WNWLDF VI+ AY+T ++
Sbjct: 148 NPPEWAKIVEYTFTGIYTFESLVKILARGFCIGPFTFLRDPWNWLDFTVISFAYLTEFVN 207
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 208 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P + + + I++ P L I I+ N + M M P E
Sbjct: 713 YRFANTFLIWNCSPHWLKFKGIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTEHFRN 772
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 773 VLTVGNLVFTGIFTAEMVFKLIA----MDPYEYFQVGWNIFDSVIVTLSLVELFLADVEG 828
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 829 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 884
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHNWFESFIVLMILLSSGALAFEDIYIEQRKIVKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>gi|395540609|ref|XP_003772245.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 2
[Sarcophilus harrisii]
Length = 1979
Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN +RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLLRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E+
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNMIVMDPFVDLAITICIVLNTLFMAMEHHPMTPHFEN 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1186 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1245
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1246 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1301
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1302 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1351
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ V + F + I+ I N + M++ + E ++F +T
Sbjct: 1506 PLNNIQGVVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1565
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1566 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1618
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1619 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1671
>gi|260782820|ref|XP_002586479.1| hypothetical protein BRAFLDRAFT_143759 [Branchiostoma floridae]
gi|229271592|gb|EEN42490.1| hypothetical protein BRAFLDRAFT_143759 [Branchiostoma floridae]
Length = 1889
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 145/183 (79%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRFS T A ++ PF+PIRR+A+Y LVH LFS ++ TIL NC+ M M
Sbjct: 59 TFIVIAKDRSIFRFSTTSACYIFTPFHPIRRLALYTLVHSLFSTLVMLTILVNCVFMTMT 118
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P I TE IFTGIYTFE VK++ARGF L F+YLRD WNWLDF VI LAY+T+ +DL
Sbjct: 119 NPPEI--TEYIFTGIYTFEMTVKLLARGFALTHFSYLRDPWNWLDFGVIGLAYITIFVDL 176
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
GNL+ALRTFRVLRALKT+++VPGLKT+V A+I+SV NLRDV+ILT+F+L VFAL+ LQ
Sbjct: 177 GNLSALRTFRVLRALKTISVVPGLKTLVSALIQSVINLRDVLILTVFALCVFALVALQIY 236
Query: 181 RGK 183
G+
Sbjct: 237 MGQ 239
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 97/189 (51%), Gaps = 29/189 (15%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTI----ESTEVIFTGIY 76
+N IR A +I+ H F FII I+ + + + + PT+ E ++ FT I+
Sbjct: 1152 WNAIRARAHWIIEHKWFETFIIAMIMFSSLALAIEDRHIRQRPTLKKILEYADLYFTFIF 1211
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGID-LGNLAALRTFR 130
E K + G+ Y +AW WLDFI++ ++ V+ MG++ + +LRT R
Sbjct: 1212 FIEMLFKWLGYGYK----KYFTNAWCWLDFIIVMVSLVSLVAKIMGMENVSAFKSLRTLR 1267
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ----------DS 180
LR L+ ++ G++ +V A+I ++ ++ +V+++ + +FA+MG+Q D
Sbjct: 1268 ALRPLRAISRAEGMRVVVNALICAIPSIGNVLLVCLIFWLIFAIMGVQLFGGKYYKCVDD 1327
Query: 181 RGKKSDESH 189
G K + S+
Sbjct: 1328 EGNKVNASY 1336
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 21 WVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIF 72
W P +N + + P+ LFI I+ N + M M T ++ F
Sbjct: 700 WSCPPVWNKFANLCFLFICDPVMELFITLCIVLNTLFMAMDYHGKSEHMTYVLQQGNYAF 759
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRV 131
TGI+ E +K++A G Y WN D I++ L+ V +G++ + L+ LR+FR+
Sbjct: 760 TGIFAGEMVLKMIALGLK----QYFTVGWNIFDSIIVTLSLVELGLEGVKGLSVLRSFRL 815
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR K P L ++ + S+ L ++ + + +FA++G+Q
Sbjct: 816 LRVFKLAKSWPTLNLLISIIGNSLGALGNLTFILGIVVYIFAVIGMQ 862
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 21/125 (16%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
++F GI+T+E K+ A G F Y WN D +V+ ++ +GI L +
Sbjct: 1519 NIVFIGIFTWEMVWKMTAFG-----FKYFSQGWNIFDCVVVVMS--ILGILLEDIIEKYF 1571
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
L +R R+ R L+ + G++T++ ++ S L ++ + L MF ++F +
Sbjct: 1572 VSPTLLRVIRVARIGRILRLIKGAKGIRTLIFSLAISAPALFNIGLLLFLVMFIYAIFGM 1631
Query: 175 MGLQD 179
+ D
Sbjct: 1632 ISFMD 1636
>gi|363744972|ref|XP_003643163.1| PREDICTED: sodium channel protein type 8 subunit alpha isoform 4
[Gallus gallus]
Length = 1937
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 782 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1245 MLLKWCAYGFV----KFFTNAWCWLDFLIVAV 1272
>gi|365812011|gb|AEX00069.1| voltage-gated sodium channel Nav1.1, partial [Branchiostoma
floridae]
Length = 1715
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 145/183 (79%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRFS T A ++ PF+PIRR+A+Y LVH LFS ++ TIL NC+ M M
Sbjct: 92 TFIVIAKDRSIFRFSTTSACYIFTPFHPIRRLALYTLVHSLFSTLVMLTILVNCVFMTMT 151
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P I TE IFTGIYTFE VK++ARGF L F+YLRD WNWLDF VI LAY+T+ +DL
Sbjct: 152 NPPEI--TEYIFTGIYTFEMTVKLLARGFALTHFSYLRDPWNWLDFGVIGLAYITIFVDL 209
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
GNL+ALRTFRVLRALKT+++VPGLKT+V A+I+SV NLRDV+ILT+F+L VFAL+ LQ
Sbjct: 210 GNLSALRTFRVLRALKTISVVPGLKTLVSALIQSVINLRDVLILTVFALCVFALVALQIY 269
Query: 181 RGK 183
G+
Sbjct: 270 MGQ 272
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 93/173 (53%), Gaps = 19/173 (10%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTI----ESTEVIFTGIY 76
+N IR A +I+ H F FII I+ + + + + PT+ E ++ FT I+
Sbjct: 981 WNAIRARAHWIIEHKWFETFIIAMIMFSSLALAIEDRHIRQRPTLKKILEYADLYFTFIF 1040
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGID-LGNLAALRTFR 130
E K + G+ Y +AW WLDFI++ ++ V+ MG++ + +LRT R
Sbjct: 1041 FIEMLFKWLGYGYK----KYFTNAWCWLDFIIVMVSLVSLVAKIMGMENVSAFKSLRTLR 1096
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G++ +V A+I ++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1097 ALRPLRAISRAEGMRVVVNALICAIPSIGNVLLVCLIFWLIFAIMGVQLFGGK 1149
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 21 WVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIF 72
W P +N + + P+ LFI I+ N + M M T ++ F
Sbjct: 519 WSCPPVWNKFANLCFLFICDPVMELFITLCIVLNTLFMAMDYHGKSEHMTYVLQQGNYAF 578
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRV 131
TGI+ E +K++A G Y WN D I++ L+ V +G++ + L+ LR+FR+
Sbjct: 579 TGIFAGEMVLKMIALGLK----QYFTVGWNIFDSIIVTLSLVELGLEGVKGLSVLRSFRL 634
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR K L ++ + S+ L ++ + + +FA++G+Q
Sbjct: 635 LRVFKLAKSWSTLNLLISIIGNSLGALGNLTFILGIVVYIFAVIGMQ 681
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
T + ++F GI+T+E K+ A G F Y WN D +V+ ++ +GI L
Sbjct: 1344 TDNLALVNIVFIGIFTWEMVWKMTAFG-----FKYFSQGWNIFDCVVVVMS--ILGILLE 1396
Query: 122 N-----------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMF 167
+ L +R R+ R L+ + G++T++ ++ S L ++ + L MF
Sbjct: 1397 DIIEKYFVSPTLLRVIRVARIGRILRLIKGAKGIRTLIFSLAISAPALFNIGLLLFLVMF 1456
Query: 168 SLSVFALMGLQD 179
++F ++ D
Sbjct: 1457 IYAIFGMISFMD 1468
>gi|118129624|ref|XP_424477.2| PREDICTED: sodium channel protein type 8 subunit alpha isoform 5
[Gallus gallus]
Length = 1978
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 782 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWCAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>gi|152012586|gb|AAI50221.1| Scn1a protein [Danio rerio]
Length = 711
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 113/179 (63%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VVSK K+I+RF+AT AL++ FN +RR++I ILVH LF+ II TIL NC M+
Sbjct: 90 TFIVVSKKKEIYRFNATPALYIFSSFNLLRRISIQILVHFLFNFIIICTILANCAFMVYT 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP +S E +FTGIYT E+ VK+ ARGF + FT+LRD WNWLDFIVI +AYVT +D
Sbjct: 150 QTPDWAKSVEYVFTGIYTLEALVKITARGFCVGRFTFLRDPWNWLDFIVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LG+++ALR FRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGSVSALRAFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALVGLQ 268
>gi|326936479|ref|XP_003214281.1| PREDICTED: sodium channel protein type 8 subunit alpha-like isoform
3 [Meleagris gallopavo]
Length = 1299
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 90 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 150 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 719 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 778
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 779 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 834
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 835 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 890
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1182 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
+K A GF+ + +AW WLDF+++A + G+
Sbjct: 1242 MLLKWCAYGFV----KFFTNAWCWLDFLIVASIWDPFGL 1276
>gi|301757655|ref|XP_002914677.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Ailuropoda melanoleuca]
Length = 2010
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LF+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFNTLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQRYLIWECCPLWMSIKQRVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1187 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1247 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>gi|431910581|gb|ELK13649.1| Sodium channel protein type 5 subunit alpha [Pteropus alecto]
Length = 1142
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 115/192 (59%), Positives = 145/192 (75%), Gaps = 14/192 (7%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-------------LFSLFII 47
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSYPLQHGFLDSGSTLFSMLIM 151
Query: 48 TTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
TILTNC+ M P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF
Sbjct: 152 CTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDF 211
Query: 107 IVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTM 166
VI +AY T +DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+
Sbjct: 212 SVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTV 271
Query: 167 FSLSVFALMGLQ 178
F LSVFAL+GLQ
Sbjct: 272 FCLSVFALIGLQ 283
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTE- 69
RF+ +W P + I++ ++++ P L I I+ N + M + T E E
Sbjct: 702 RFAQRYLIWECCPLWISIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 761
Query: 70 -----VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 762 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 817
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 818 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 872
>gi|402886023|ref|XP_003906441.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Papio anubis]
Length = 1931
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES V ++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVXIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 716 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 775
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 776 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1179 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
+K A GF+ + +AW WLDF+++A+
Sbjct: 1239 MLLKWTAYGFV----KFFTNAWCWLDFLIVAV 1266
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1458 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1517
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1518 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1570
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1571 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1623
>gi|28277639|gb|AAH44197.1| Scn1a protein [Danio rerio]
Length = 711
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 112/179 (62%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VVSK K+I+RF+AT AL++ FN +RR++I ILVH LF+ II TIL NC M+
Sbjct: 90 TFIVVSKKKEIYRFNATPALYIFSSFNLLRRISIQILVHFLFNFIIICTILANCAFMVYT 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP ++ E +FTGIYT E+ VK+ ARGF + FT+LRD WNWLDFIVI +AYVT +D
Sbjct: 150 QTPDWAKNVEYVFTGIYTLEALVKITARGFCVGRFTFLRDPWNWLDFIVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LG+++ALR FRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGSVSALRAFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALVGLQ 268
>gi|414091061|gb|AFW98418.1| sodium channel Na-Lv2 [Culex quinquefasciatus]
Length = 2091
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 131/178 (73%), Gaps = 43/178 (24%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSAT+AL+VLDPFNPIRRVAIYILVHPLFS FIITTIL NCILMIMP
Sbjct: 113 TFVVVSKGKDIFRFSATNALYVLDPFNPIRRVAIYILVHPLFSFFIITTILGNCILMIMP 172
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTE YVTMGIDL
Sbjct: 173 STPTVESTE-------------------------------------------YVTMGIDL 189
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLS FALMGLQ
Sbjct: 190 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSAFALMGLQ 247
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 59 MPGTPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P P ++ + IFT I+ E +K +A GF + Y +AW WLDFI++ ++ +
Sbjct: 1299 LPHRPILQDVLYYMDRIFTVIFFLEMLIKWLALGFRV----YFTNAWCWLDFIIVMVSLI 1354
Query: 115 TMGIDL---GNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
L G + A +RT R LR L+ ++ + G++ +V A+++++ + +V+++ +
Sbjct: 1355 NFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSTFNVLLVCLIF 1414
Query: 169 LSVFALMGLQDSRGK 183
+FA+MG+Q GK
Sbjct: 1415 WLIFAIMGVQLFAGK 1429
>gi|327274284|ref|XP_003221908.1| PREDICTED: sodium channel protein type 5 subunit alpha-like [Anolis
carolinensis]
Length = 1959
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 148/190 (77%), Gaps = 8/190 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT ALW+ PF+PIRR+AI ILVH LF++FI+ TI TNC+ M +
Sbjct: 86 TFMVLNKGKAIFRFTATRALWIFSPFHPIRRLAIKILVHSLFTMFIMVTIFTNCVFMTLS 145
Query: 61 GTP---TIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
+P T E++ E FTGIYTFE +K++ARGF L FT+LRD WNWLDF VI +A
Sbjct: 146 ESPQSGTNETSSSKYVEFTFTGIYTFECLIKILARGFCLNEFTFLRDPWNWLDFSVIMMA 205
Query: 113 YVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
Y+ IDLGN++ LR FRVLRALKT++++PGLK IVGA+I+S+K L DV+ILT+F LSVF
Sbjct: 206 YIGAFIDLGNVSVLRMFRVLRALKTISVIPGLKVIVGALIQSIKKLADVMILTVFCLSVF 265
Query: 173 ALMGLQDSRG 182
AL+GLQ +G
Sbjct: 266 ALIGLQLFKG 275
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + + P I E + IFT I+ E
Sbjct: 1141 LRKTCYQIVEHNWFESFIVFMILLSSGALAFEDIYLTEKPRIKMMLEYADKIFTYIFILE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ ++G + +LRT R LR
Sbjct: 1201 MLLKWVAYGF----HKYFTNAWCWLDFLIVDVSLVSLVASLAGKSEIGAMKSLRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F+++G+ GK
Sbjct: 1257 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVSLFAGK 1306
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 26/170 (15%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIM------PGTPTIES-TEVIFTGIYTFESAV 82
++V+I+++ P L I I+ N + M + PG + S IFTGI+T E +
Sbjct: 691 KKVSIFVM-DPFTDLTITLCIVINTLFMALEHYKMTPGFKLMLSIGNKIFTGIFTAEVIL 749
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA--------------LRT 128
K++A ++ + Y + + N D IV+ ++ + + I A LRT
Sbjct: 750 KIIA----MDPYYYFQQSSNIFDSIVVFISIIELSIPSEPQKADKGKRGGKKGTFTVLRT 805
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+LR K P L T++ ++ S+ L ++ ++ + +FA+ G+Q
Sbjct: 806 LRLLRVFKLAKSWPTLNTLIKIILNSINALSNLTLVLALIVFIFAVFGMQ 855
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 36/198 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + Y I H F + I+ I N
Sbjct: 1431 GEDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDIATHQAFDISIMVLICLN 1490
Query: 54 CI-LMIMPGTPTIEST------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ +M+ + E T V+F I+T E +K++A + Y + WN D
Sbjct: 1491 MVTMMVEADEQSAEKTYVLSKINVLFITIFTAECVMKLVAL-----RYYYFTNGWNIFDL 1545
Query: 107 IVI-------ALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLR 159
+V+ L+ + + +R R+ R L+ + G++T++ A++ S+ L
Sbjct: 1546 VVVIMSIVGSVLSGIVVSFSPTLFRVIRLVRIGRILRLIRSARGIRTLLFALMMSLPALF 1605
Query: 160 DV---IILTMFSLSVFAL 174
++ + L MF ++F +
Sbjct: 1606 NIGLLLFLVMFIYAIFGM 1623
>gi|320542210|ref|NP_001188642.1| paralytic, isoform AU [Drosophila melanogaster]
gi|318069432|gb|ADV37724.1| paralytic, isoform AU [Drosophila melanogaster]
Length = 1125
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 132/178 (74%), Gaps = 43/178 (24%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+EST+ YVTMGIDL
Sbjct: 163 TTPTVESTD-------------------------------------------YVTMGIDL 179
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 180 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 237
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 712 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 766
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 767 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 822
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 823 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 879
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 880 AVMGMQ 885
>gi|320542208|ref|NP_001188641.1| paralytic, isoform AT [Drosophila melanogaster]
gi|318069431|gb|ADV37723.1| paralytic, isoform AT [Drosophila melanogaster]
Length = 2056
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 132/178 (74%), Gaps = 43/178 (24%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+EST+ YVTMGIDL
Sbjct: 163 TTPTVESTD-------------------------------------------YVTMGIDL 179
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 180 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 237
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1215 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1274
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1275 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1330
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1331 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1380
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 712 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 766
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 767 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 822
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 823 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 879
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 880 AVMGMQ 885
>gi|320542206|ref|NP_001188640.1| paralytic, isoform AS [Drosophila melanogaster]
gi|318069430|gb|ADV37722.1| paralytic, isoform AS [Drosophila melanogaster]
Length = 2067
Score = 232 bits (592), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 132/178 (74%), Gaps = 43/178 (24%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+EST+ YVTMGIDL
Sbjct: 163 TTPTVESTD-------------------------------------------YVTMGIDL 179
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 180 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 237
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1226 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1285
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1286 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1341
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1342 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1391
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 733 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 787
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 788 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 843
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 844 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 900
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 901 AVMGMQ 906
>gi|320542212|ref|NP_001188643.1| paralytic, isoform AV [Drosophila melanogaster]
gi|318069433|gb|ADV37725.1| paralytic, isoform AV [Drosophila melanogaster]
Length = 1117
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 132/178 (74%), Gaps = 43/178 (24%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 103 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 162
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+EST+ YVTMGIDL
Sbjct: 163 TTPTVESTD-------------------------------------------YVTMGIDL 179
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 180 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 237
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 704 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 758
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 759 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 814
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 815 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 871
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 872 AVMGMQ 877
>gi|184039|gb|AAA58644.1| sodium channel alpha subunit [Homo sapiens]
Length = 2016
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++AR F L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARAFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|351704425|gb|EHB07344.1| Sodium channel protein type 4 subunit alpha [Heterocephalus glaber]
Length = 1833
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +L+H ++FI+ TILTNC+ M M
Sbjct: 84 TFIVLNKGKSIFRFSATPALYMLSPFSIIRRSAIKVLIHSYPAMFIMITILTNCVFMTMS 143
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF +++FT+LRD WNWLDF VI +AYVT +D
Sbjct: 144 DPPPWSKNVEYTFTGIYTFESLIKMLARGFCIDNFTFLRDPWNWLDFSVILMAYVTEFVD 203
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 204 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 262
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 541 PWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 600
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 601 AEMVLKLIA----LDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 656
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 657 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 698
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + P TI E + IFT I+ E
Sbjct: 1001 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRPVIRTILEYADKIFTYIFIME 1060
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1061 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1116
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1117 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1166
>gi|145559672|gb|ABP73661.1| voltage-gated sodium channel type V alpha subunit variant [Rattus
norvegicus]
Length = 306
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V +KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF+ I+ TILTNC+ M
Sbjct: 92 TFIVPNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNTLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARG L +FT+LR WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEHTFTAIYTFESLVKILARGSCLHAFTFLRGPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
>gi|343098404|tpg|DAA34933.1| TPA_inf: voltage-dependent sodium channel SCN4A [Anolis
carolinensis]
Length = 1843
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T++++SKGK IFRFS T AL++LDPFN +RR AI V ++S+FI+ TILTNC+ M M
Sbjct: 89 TYILLSKGKTIFRFSTTPALYMLDPFNIVRRGAIQFNVLQIYSMFIMITILTNCVFMAMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ ++ E FTGIYTFES +K++ARGF ++SFT+LRD WNWLDF VI +AY+T +D
Sbjct: 149 NPPSWAKNVEYTFTGIYTFESTIKILARGFCVDSFTFLRDPWNWLDFSVIVMAYLTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLAVFALIGLQ 267
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ +W PF ++ + I++ P L I I+ N + M M P E
Sbjct: 534 YKFANAVLVWNCCPFWVKLKHILKLIVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFNN 593
Query: 70 -------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLG 121
V+FTGI+T E +K++A L+ + Y + WN D I++ L+ V + + ++
Sbjct: 594 VLTVGNLVVFTGIFTAEMVLKLIA----LDPYEYFQVGWNIFDSIIVTLSLVELALANVQ 649
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 650 GLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 706
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + P TI E + +F+ ++ E
Sbjct: 998 LRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIERRPVIRTILEYADKVFSYVFVIE 1057
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ ++ MG +LG + +LRT R LR
Sbjct: 1058 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWMGYSELGPIKSLRTLRALR 1113
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1114 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1163
>gi|327277934|ref|XP_003223718.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Anolis
carolinensis]
Length = 1963
Score = 231 bits (590), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 146/178 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L++L PF+ +RR++I I VH LFS+FI+ TIL NC++M
Sbjct: 92 TFIVLNKGKTIFRFSATPSLYLLSPFSILRRISIKIFVHSLFSMFIMLTILANCVVMTQT 151
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
+S E FT IYTFES VK+ ARGF ++ FT+LRD WNWLDF+VI+ AY+T ++L
Sbjct: 152 EPKWGKSVEYTFTAIYTFESLVKIFARGFCIDDFTFLRDPWNWLDFLVISFAYITEFVNL 211
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 GNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT------ 64
++F+ T +W + +++V +I++ P L I I+ N + M + P+
Sbjct: 704 YKFAHTCLIWDCSSAWIEVKKVVYFIVMDPFVDLGITICIVANTVFMALEHYPSDKAFSD 763
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+++ ++FTGI+T E +K++A ++ + Y + WN D I+++L+ + +G+ ++
Sbjct: 764 VLKNGNLVFTGIFTAEMVLKIIA----MDPYYYFQVGWNIFDSIIVSLSLMELGLSNIDG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1162 LRKTCYRIVEHSWFETFIVFMILLSSGALAFEDIYIEQRKTIKIILEYADKVFTYIFILE 1221
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K ++ GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1222 MLLKWVSYGFQV----YFTNAWCWLDFLIVDVSIVSLIANALDYAELGPIKSLRTLRALR 1277
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G+K +V A+I ++ ++ +V+++ + +F++MG+
Sbjct: 1278 PLRALSRFEGMKVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVN 1322
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 39/205 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R A + + F + I++ I
Sbjct: 1446 RGQDIFMTEEQKKYYNAMKKLGNKKPQKPIPRPANKVQGFIFDFVTRQAFDIGIMSLICL 1505
Query: 53 NCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N + M++ ES + VIF ++T E +K++A + Y WN D
Sbjct: 1506 NMVTMMVETDDEDESKKKILYWINVIFIILFTGEFLLKLIAL-----RYYYFTIGWNIFD 1560
Query: 106 FIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
F+V+ L+++ G+ L L +R R+ R L+ + G++T++ A++ S
Sbjct: 1561 FVVVILSFI--GMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMS 1618
Query: 155 VKNLRDVIILTMFSLSVFALMGLQD 179
+ L ++ +L + ++A+ G+
Sbjct: 1619 LPALFNIGLLLFLVMFIYAIFGMSQ 1643
>gi|77683215|gb|ABA54921.1| voltage-gated sodium channel type IV alpha subunit Nav1.4a [Danio
rerio]
Length = 1827
Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG IFRFS+ A++ + PF+ +RR AI IL+H LFS+FI+ TIL+NC+ M M
Sbjct: 85 TFIVISKGNTIFRFSSEPAMFCISPFSIVRRGAIKILIHSLFSMFIMITILSNCVFMTMS 144
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 145 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGPFTFLRDPWNWLDFMVISMAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKMIDVMILTIFALAVFALIGLQ 263
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARG 88
+RR I+ H F FII IL + + IE VI T E A KV
Sbjct: 986 LRRTCFTIVEHDYFETFIIFMILLSSGALAFEDI-NIERRRVIKT---ILEYADKVFTYI 1041
Query: 89 FILESF--------TYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLRA 134
FI+E TY +AW WLDF+++ ++ V+ MG +LG + +LRT R LR
Sbjct: 1042 FIVEMLLKWVAYFKTYFTNAWCWLDFLIVDVSLVSLTANLMGYSELGAIKSLRTLRALRP 1101
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1102 LRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1150
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTP 63
K D+F A W+L ++ ++++ P L I I+ N + M M P +P
Sbjct: 554 KFADMFLKWDCCAPWIL-----FKKWVHFVVMDPFVDLGITICIVLNTLFMAMEHYPMSP 608
Query: 64 TIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI- 118
E ++FTGI+T E K++A ++ + Y + WN D I++ L+ V +G+
Sbjct: 609 HFEHVLSVGNLVFTGIFTAEMVFKLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLA 664
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 665 NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 724
>gi|148833296|gb|ABR14545.1| voltage-gated sodium channel type V alpha subunit [Rattus
norvegicus]
Length = 2016
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V +KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF+ I+ TILTNC+ M
Sbjct: 92 TFIVPNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNTLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARG L +FT+LR WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEHTFTAIYTFESLVKILARGSCLHAFTFLRGPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPXTDLTITXCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|89886319|ref|NP_001034914.1| sodium channel protein type 4 subunit alpha A [Danio rerio]
gi|123910533|sp|Q2XVR3.2|SC4AA_DANRE RecName: Full=Sodium channel protein type 4 subunit alpha A;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4a
gi|84310206|gb|ABB29445.2| voltage-gated sodium channel Nav1.4a [Danio rerio]
Length = 1829
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG IFRFS+ A++ + PF+ +RR AI IL+H LFS+FI+ TIL+NC+ M M
Sbjct: 85 TFIVISKGNTIFRFSSEPAMFCISPFSIVRRGAIKILIHSLFSMFIMITILSNCVFMTMS 144
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 145 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGPFTFLRDPWNWLDFMVISMAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKMIDVMILTIFALAVFALIGLQ 263
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FII IL + + +E + +FT I+ E
Sbjct: 986 LRRTCFTIVEHDYFETFIIFMILLSSGALAFEDINIERRRVIKTILEYADKVFTYIFIVE 1045
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V+ MG +LG + +LRT R LR
Sbjct: 1046 MLLKWVAYGFK----TYFTNAWCWLDFLIVDVSLVSLTANLMGYSELGAIKSLRTLRALR 1101
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1102 PLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1151
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTP 63
K D+F A W+L ++ ++++ P L I I+ N + M M P +P
Sbjct: 554 KFADMFLKWDCCAPWIL-----FKKWVHFVVMDPFVDLGITICIVLNTLFMAMEHYPMSP 608
Query: 64 TIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI- 118
E ++FTGI+T E K++A ++ + Y + WN D I++ L+ V +G+
Sbjct: 609 HFEHVLSVGNLVFTGIFTAEMVFKLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLA 664
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 665 NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 724
>gi|440894474|gb|ELR46917.1| Sodium channel protein type 8 subunit alpha, partial [Bos grunniens
mutus]
Length = 1977
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 148/186 (79%), Gaps = 8/186 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-------LFSLFIITTILTN 53
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTN
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSYPFLQMWIFSMIIMCTILTN 152
Query: 54 CILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
C+ M P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +A
Sbjct: 153 CVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMA 212
Query: 113 YVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
YVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVF
Sbjct: 213 YVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVF 272
Query: 173 ALMGLQ 178
AL+GLQ
Sbjct: 273 ALIGLQ 278
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 742 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 801
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 802 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 857
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 858 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 913
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1205 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1264
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1265 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1320
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1321 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1370
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1524 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1583
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1584 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1636
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1637 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1689
>gi|148833298|gb|ABR14546.1| voltage-gated sodium channel type V alpha subunit variant [Rattus
norvegicus]
Length = 1963
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V +KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF+ I+ TILTNC+ M
Sbjct: 92 TFIVPNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNTLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARG L +FT+LR WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEHTFTAIYTFESLVKILARGSCLHAFTFLRGPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1140 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1200 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPXTDLTITXCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|113675683|ref|NP_001038648.1| sodium channel, voltage-gated, type VIII, alpha b [Danio rerio]
gi|76786325|gb|ABA54924.1| voltage-gated sodium channel type VIII alpha subunit Nav1.6b [Danio
rerio]
Length = 1958
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L+++ PFN R++AI IL+H FS+ I+ TILTNC+ M
Sbjct: 95 TFIVLNKGKTIFRFSATPSLYIISPFNLFRQIAIKILIHSFFSMIIMCTILTNCVFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES K++ARGF ++ FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 155 NPPEWSKQVEYTFTGIYTFESLTKIVARGFCIDDFTFLRDPWNWLDFMVISMAYVTEFVD 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++P LKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPRLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 697 YKFANTFLIWECCPIWIKIKEIVNLIVMDPFVDLAITICIVLNTVFMAMEHYPMTPRFEE 756
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y ++ WN D +++L+ V +G+ D+
Sbjct: 757 VLSVGNLVFTGIFTAEMFAKLIA----MDPYYYFQEGWNIFDGFIVSLSLVELGLADVEG 812
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 813 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++
Sbjct: 1207 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLIANALGYS 1262
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V ++ + +F++MG+
Sbjct: 1263 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVPLVCLIFWLIFSIMGVN 1322
Query: 179 DSRGK 183
GK
Sbjct: 1323 LFAGK 1327
>gi|334323136|ref|XP_003340349.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 4
subunit alpha-like [Monodelphis domestica]
Length = 1811
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +L+H LFSLFI+ TIL NC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSMIRRGAIKVLIHSLFSLFIMITILANCVFMTMN 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYT ES +K+++RGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 NPPPWSKNVEYTFTGIYTCESLIKMLSRGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 MGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 270
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++ + T +W P+ ++++ I++ P L I I+ N + M M P TP E
Sbjct: 532 YKCAHTLLVWNCCAPWVKLKKILYLIVMDPFVDLGITICIVLNTVFMAMEHYPMTPQFEH 591
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D ++ L+ V +G+ ++
Sbjct: 592 VLTVGNLVFTGIFTAEMVLKLIA----LDPYEYFQQGWNIFDSFIVTLSLVELGLANVQG 647
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 648 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 703
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR ++ H F FI+ IL + + +E + +F+ ++ E
Sbjct: 1000 LRRACFTMVEHNWFETFIVFMILLSSGALAFEDIYIEQRKVIKTILEYADKVFSYVFVLE 1059
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1060 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGAIKSLRTLRALR 1115
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG GK
Sbjct: 1116 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGXNLFAGK 1165
>gi|440901586|gb|ELR52498.1| Sodium channel protein type 5 subunit alpha [Bos grunniens mutus]
Length = 2027
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 146/185 (78%), Gaps = 7/185 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFS----LFIITTILTNC 54
TF+V++KGK IFRFSAT+AL VL PF+PIRRVA+ ILVH PL S + I+ TILTNC
Sbjct: 92 TFIVLNKGKTIFRFSATNALHVLSPFHPIRRVAVKILVHSYPLRSIPAGMLIMCTILTNC 151
Query: 55 ILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
+ M P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY
Sbjct: 152 VFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAY 211
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
V+ I LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFA
Sbjct: 212 VSENIKLGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFA 271
Query: 174 LMGLQ 178
L+GLQ
Sbjct: 272 LIGLQ 276
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 698 RFAQHYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 757
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 758 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 813
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 814 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1204 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ +G ++G + +LRT R LR
Sbjct: 1264 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1319
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1320 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1369
>gi|344288115|ref|XP_003415796.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Loxodonta africana]
Length = 1844
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K K IFRFSATDAL++ PF+P+RR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKDKTIFRFSATDALYLFSPFHPVRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT +YTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAVYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1021 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1080
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1081 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1136
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1137 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1186
>gi|148888460|gb|ABR15764.1| Nav1.5 Na+ channel [Homo sapiens]
Length = 1998
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V +KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVPNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARG L +FT+LR WNW DF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEHTFTAIYTFESLVKILARGSCLHAFTFLRGPWNWPDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCHIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|351713933|gb|EHB16852.1| Sodium channel protein type 5 subunit alpha [Heterocephalus glaber]
Length = 2017
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 145/181 (80%), Gaps = 4/181 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT AL++L PF+P+RR A+ ILVH PL + I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATKALYILSPFHPVRRAAVKILVHSYPL-RMLIMCTILTNCVFMA 150
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P+ + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+
Sbjct: 151 QHDPPSWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSEN 210
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
I LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GL
Sbjct: 211 IKLGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGL 270
Query: 178 Q 178
Q
Sbjct: 271 Q 271
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 686 RFAERYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 745
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 746 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 801
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 802 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 856
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1192 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1251
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1252 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFSEMGPIKSLRTLRALR 1307
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1308 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1357
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R + Y I+ F + I+ I
Sbjct: 1479 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICL 1538
Query: 53 NCILMIMP---GTPT----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N + M++ +P + ++F I+T E VK+ A L + Y ++WN D
Sbjct: 1539 NMVTMMVETDDQSPEKVNILSKINLLFVAIFTGECIVKMTA----LRHY-YFTNSWNIFD 1593
Query: 106 FIVIALAYVTMGIDLGNLAA----------------LRTFRVLRALKTVAIVPGLKTIVG 149
F+V+ L+ V GNL + R R+ R L+ + G++T++
Sbjct: 1594 FVVVILSIVG-----GNLCSNPLLHFKNWVIFLLLRFRLARIGRILRLIRGAKGIRTLLF 1648
Query: 150 AVIESVKNLRDV---IILTMFSLSVFAL 174
A++ S+ L ++ + L MF S+F +
Sbjct: 1649 ALMMSLPALFNIGLLLFLVMFIYSIFGM 1676
>gi|148888458|gb|ABR15763.1| Nav1.5 Na+ channel [Homo sapiens]
Length = 2016
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V +KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVPNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARG L +FT+LR WNW DF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEHTFTAIYTFESLVKILARGSCLHAFTFLRGPWNWPDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCHIFWLIFSIMGVNLFAGK 1359
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
>gi|350536969|ref|NP_001233256.1| sodium channel protein type 5 subunit alpha [Monodelphis domestica]
gi|342837663|tpg|DAA34921.1| TPA_inf: voltage-dependent sodium channel SCN5A [Monodelphis
domestica]
Length = 1840
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 144/180 (80%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH F +FI+ TILTNC+ M
Sbjct: 90 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSYPFHMFIMCTILTNCVFMAQ 149
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +
Sbjct: 150 HEPPGWTKYVEYTFTAIYTFESLVKILARGFCLNAFTFLRDPWNWLDFSVIVMAYTTEFV 209
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 210 DLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 269
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST 68
RF+ +W P + +++ ++++ P L I I+ N + M + TP E
Sbjct: 713 RFAQNYLIWECCPLWLSVKQRVKFVVMDPFTDLTITICIVLNTLFMALEHYNMTPDFEDM 772
Query: 69 ----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++FTGI+T E K++A LE + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 773 LQVGNLVFTGIFTGEMTFKIIA----LEPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 828
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 829 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 883
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 44/204 (21%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R + Y I+ F + I+ I
Sbjct: 1327 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICL 1386
Query: 53 NCILMIMP---GTPT----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N + M++ +P + ++F GI+T E +KV+A L + Y ++WN D
Sbjct: 1387 NMVTMMVETDDQSPEKISILAKINLLFVGIFTGECVIKVIA----LRHY-YFTNSWNIFD 1441
Query: 106 FIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
F+V+ L+ V G L ++ +R R+ R L+ + G++T++ A++ S
Sbjct: 1442 FVVVILSIV--GTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMS 1499
Query: 155 VKNLRDVIIL-----TMFSLSVFA 173
+ L ++ +L MF+ FA
Sbjct: 1500 LPALFNIGLLLFLIDDMFTFQTFA 1523
>gi|113676053|ref|NP_001038530.1| sodium channel protein type 4 subunit alpha B [Danio rerio]
gi|123891533|sp|Q20JQ7.1|SC4AB_DANRE RecName: Full=Sodium channel protein type 4 subunit alpha B;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4b
gi|76786317|gb|ABA54920.1| voltage-gated sodium channel type IV alpha subunit Nav1.4b [Danio
rerio]
Length = 1784
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K I+RF+ A + L PFNP+RR AI IL+H LFSL I+ TILTNC+ M M
Sbjct: 91 TFIVIDKKNTIYRFNTEPACYCLSPFNPVRRAAIRILIHSLFSLVIMLTILTNCVFMAMS 150
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 151 DPPGWSKILEYVFTGIYTFEAMVKVLSRGFCIGDFTFLRDPWNWLDFMVISMAYLTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 269
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTEV------IFTGIYT 77
P+ +R+ ++ P L I I+ N + M M P ++ EV +FTGI+
Sbjct: 553 PWVKFKRIVYLFVMDPFVDLGITLCIVLNTVFMAMEHYPMSVHVEEVLAIGNLVFTGIFA 612
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ ++ V M D+ L+ LR+FR++R K
Sbjct: 613 AEMVLKLIA----LDPYYYFQVGWNIFDSIIVTMSLVELMLADVEGLSVLRSFRLMRVFK 668
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 669 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 710
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 962 RKTCFAIVEHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVVEM 1021
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1022 LLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRP 1077
Query: 135 LKTVAIVPGLK-TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1078 LRALSRFEGMRVVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1127
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVIFTGIYTF----- 78
P N + + + F +FI+ I N + +M+ + E E++F + F
Sbjct: 1281 PTNCCQGLVFDFVTQQFFDIFIMVMICLNMVTMMVETDDQSAEIEEILFYINFAFIILFT 1340
Query: 79 -ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ A + Y WN DF+V+ L+ +GI L +L +
Sbjct: 1341 GECVLKITAL-----RYHYFSIGWNIFDFVVVILS--ILGIGLADLIEKYFVSPTLFRVI 1393
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1394 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1446
>gi|84371420|gb|ABB29446.2| voltage-gated sodium channel Nav1.4b [Danio rerio]
gi|190339974|gb|AAI63558.1| Scn4ab protein [Danio rerio]
Length = 1783
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K I+RF+ A + L PFNP+RR AI IL+H LFSL I+ TILTNC+ M M
Sbjct: 91 TFIVIDKKNTIYRFNTEPACYCLSPFNPVRRAAIRILIHSLFSLVIMLTILTNCVFMAMS 150
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 151 DPPGWSKILEYVFTGIYTFEAMVKVLSRGFCIGDFTFLRDPWNWLDFMVISMAYLTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 269
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 962 RKTCFAIVEHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVVEM 1021
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1022 LLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRP 1077
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1078 LRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1126
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTEV------IFTGIYT 77
P+ +R+ ++ P L I I+ N + M M P ++ EV +FTGI+
Sbjct: 553 PWVKFKRIVYLFVMDPFVDLGITLCIVLNTVFMAMEHYPMSVHVEEVLAIGNLVFTGIFA 612
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ ++ V M D+ L+ LR+FR++R K
Sbjct: 613 AEMVLKLIA----LDPYYYFQVGWNIFDSIIVTMSLVELMLADVEGLSVLRSFRLMRVFK 668
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 669 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 710
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVIFTGIYTF----- 78
P N + + + F +FI+ I N + +M+ + E E++F + F
Sbjct: 1280 PTNCCQGLVFDFVTQQFFDIFIMVMICLNMVTMMVETDDQSAEIEEILFYINFAFIILFT 1339
Query: 79 -ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ A + Y WN DF+V+ L+ +GI L +L +
Sbjct: 1340 GECVLKITAL-----RYHYFSIGWNIFDFVVVILS--ILGIGLADLIEKYFVSPTLFRVI 1392
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1393 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1445
>gi|444525849|gb|ELV14177.1| Sodium channel protein type 4 subunit alpha [Tupaia chinensis]
Length = 1856
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 144/180 (80%), Gaps = 2/180 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFS-LFIITTILTNCILMIM 59
TF+V++KGK IFRFSAT+AL++L PF+P+RR A+ ILVH S + I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPVRRAAVKILVHSYPSCMLIMCTILTNCVFMAQ 151
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 HEPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENI 211
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 KLGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 501 RFAQRYLIWECCPLWMAIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 560
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ F Y + WN D I++ L+ + +G+ +GNL
Sbjct: 561 LQVGNLVFTGIFTAEMTFKIIA----LDPFYYFQQGWNIFDSIIVILSLMELGLSRMGNL 616
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 617 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 671
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI- 118
+E + +FT ++ E +K +A GF Y +AW WLDF++ I+L T+G
Sbjct: 1057 LEYADKMFTYVFVLEMLLKWVAYGFQ----KYFTNAWCWLDFLIVDVSLISLVANTLGFA 1112
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++G + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1113 EMGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1172
Query: 179 DSRGK 183
GK
Sbjct: 1173 LFAGK 1177
>gi|119614632|gb|EAW94226.1| sodium channel, voltage-gated, type IV, alpha, isoform CRA_b [Homo
sapiens]
Length = 1836
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H ++FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHAYPAMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|126352342|ref|NP_001075230.1| sodium channel protein type 4 subunit alpha [Equus caballus]
gi|75059200|sp|Q28371.1|SCN4A_HORSE RecName: Full=Sodium channel protein type 4 subunit alpha; AltName:
Full=Sodium channel protein skeletal muscle subunit
alpha; AltName: Full=Sodium channel protein type IV
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.4
gi|829615|gb|AAA67366.1| skeletal muscle sodium channel alpha-subunit [Equus caballus]
Length = 1834
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +L+H LFS+FI+ TIL NC++M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIIRRSAIKVLIHSLFSMFIMITILPNCVVMTMS 151
Query: 61 GTPTIE-STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E FTGI TFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWPIHVENTFTGINTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F F + IL N + +E + +FT I+ E
Sbjct: 1017 LRRACFKIVEHHWFKTFNSSLILLNSGTLAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1076
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1077 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1132
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1133 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWVIFSIMGVN 1177
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDKVLTVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG-IDLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ L++V +G +++ L+ LR+FR++R+LK
Sbjct: 617 AEMVLKLIA----LDPYEYFQQGWNVFDSIIVTLSWVELGLVNVKGLSVLRSFRLVRSLK 672
Query: 137 TVAIVPGLKTIV 148
P L +
Sbjct: 673 LAKSWPTLNMFI 684
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I +V+ + +F IT ++ C+
Sbjct: 1304 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDITIMILICLN 1363
Query: 57 MIMPGTPTIESTE----------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
M+ T + ++ ++F ++T E +K+ F L Y WN DF
Sbjct: 1364 MVTMMVETDDQSQLKVDILYNINMVFIIVFTGECVLKM----FALRQ-NYFTVGWNIFDF 1418
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1419 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1476
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ +IL MF S+F +
Sbjct: 1477 PALFNIGLLLILVMFIYSIFGM 1498
>gi|119584944|gb|EAW64540.1| sodium channel, voltage-gated, type V, alpha (long QT syndrome 3),
isoform CRA_a [Homo sapiens]
Length = 1440
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 145/183 (79%), Gaps = 5/183 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILV----HPLFSLFIITTILTNCIL 56
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ IL+ LF++ I+ TILTNC+
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILLSLTPRTLFNMLIMCTILTNCVF 151
Query: 57 MIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
M P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+
Sbjct: 152 MAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVS 211
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
I LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+
Sbjct: 212 ENIKLGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALI 271
Query: 176 GLQ 178
GLQ
Sbjct: 272 GLQ 274
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI- 118
+E + +FT ++ E +K +A GF Y +AW WLDF+++ ++ V T+G
Sbjct: 852 LEYADKMFTYVFVLEMLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFA 907
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++G + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 908 EMGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 967
Query: 179 DSRGK 183
GK
Sbjct: 968 LFAGK 972
>gi|124481848|gb|AAI33131.1| Scn1a protein [Danio rerio]
Length = 690
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VVSK K+I+RF+AT AL++ FN +RR++I ILVH LF+ II TIL NC M+
Sbjct: 90 TFIVVSKKKEIYRFNATPALYIFSSFNLLRRISIQILVHFLFNFIIICTILANCAFMVYT 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP +S E +FTGIYT E+ VK+ ARGF + FT+LRD WNWLDFIVI +AYVT +D
Sbjct: 150 QTPDWAKSVEYVFTGIYTLEALVKITARGFCVGPFTFLRDPWNWLDFIVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LG+++ALR FRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGSVSALRAFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALVGLQ 268
>gi|449275391|gb|EMC84263.1| Sodium channel protein type 2 subunit alpha, partial [Columba
livia]
Length = 1299
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFN +RR+AI ILVH + I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATPALYLLSPFNIVRRIAIKILVHSYPFMLIMLTILTNCVFMTWT 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFE VK++ARGF + FT LRD WNWLDF+VI+ AYVT +D
Sbjct: 152 NLPDWTKNVEYTFTGIYTFEFLVKILARGFCINDFTCLRDPWNWLDFVVISFAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 270
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ T +W +P+ +++V +I++ P L + I+ N + M M P ++
Sbjct: 716 YKFAHTFLIWNCWEPWLKVKKVVEFIVMDPFVDLAVTVCIVLNTLFMAMEHYPMTDNFTN 775
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+FTG++ E +K++A + F Y + WN D ++ L+ V + + ++
Sbjct: 776 VLKIGNQVFTGVFAAEMVLKIIA----MHPFYYFQVGWNIFDSFIVVLSLVELFLSNVDG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 19/132 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + ++ + IFT I+ E
Sbjct: 1171 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTVLDYADKIFTYIFILE 1230
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW W+DF+++ ++ V+ +G +L + +LRT R LR
Sbjct: 1231 MVLKWVAYGFQ----TYFTNAWCWMDFLIVDVSLVSLVATALGFSELSAIKSLRTLRALR 1286
Query: 134 ALKTVAIVPGLK 145
L+ ++ G++
Sbjct: 1287 PLRALSRFEGMR 1298
>gi|47228044|emb|CAF97673.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1860
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+ +R +A+ +LVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKSIFRFSATSALYIFSPFHFLRAIAVRVLVHSLFSLFIMFTILTNCFFMAMS 149
Query: 61 G-TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES +K+ ARGF + F++LRD WNWLDF VI +AYVT +D
Sbjct: 150 DPAPWTKYLEYTFTAIYTFESVIKIFARGFCVVPFSFLRDPWNWLDFTVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SV+ L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVRKLADVMILTVFCLSVFALIGLQ 268
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+ F+ +W P+ I+ +++ P L I I+ N + M + P E
Sbjct: 688 YTFAKKYLIWECCPWWRQIKEWVKRMVMDPFLDLGITICIVLNTLFMALEHYPMTEEFNT 747
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D +++ L+ + +G+ ++
Sbjct: 748 MLSVGNLVFTGIFTAEMVLKLIA----LDPYYYFQQGWNIFDGVIVCLSLMELGLSNVEG 803
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 804 LSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E+ + +F+ I+ E
Sbjct: 1095 LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIEKRKVIKVVLEAADKVFSYIFVLE 1154
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y + W WLDF++ I+L ++G D + +LRT R LR
Sbjct: 1155 MFLKWIAYGFK----KYFTNYWCWLDFLIVDVSLISLVANSLGYSDFTAIKSLRTLRALR 1210
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1211 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1260
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL------ 123
++F I+T E +K+ F L + + AWN DF+VI L+ V GI L ++
Sbjct: 1473 LVFIVIFTTECVIKI----FALRCY-FFTIAWNIFDFVVIILSIV--GIVLADIIEKYFV 1525
Query: 124 -----AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+R R+ R L+ + G++T++ A++ S+ L ++ +L + ++A+ G+
Sbjct: 1526 SPTLFRVIRLARIGRVLRLIRAAKGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMA 1585
Query: 179 D-SRGKKSDESHD 190
+ + KK D D
Sbjct: 1586 NFAYVKKQDGIDD 1598
>gi|344243064|gb|EGV99167.1| Sodium channel protein type 4 subunit alpha [Cricetulus griseus]
Length = 1939
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 146/183 (79%), Gaps = 5/183 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPL----FSLFIITTILTNCIL 56
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H S+FI+ TILTNC+
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIVRRGAIKVLIHAYPAQWESMFIMITILTNCVF 151
Query: 57 MIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
M M P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT
Sbjct: 152 MTMSNPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVT 211
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+DLGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+
Sbjct: 212 EFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALV 271
Query: 176 GLQ 178
GLQ
Sbjct: 272 GLQ 274
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1089 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1148
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1149 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1204
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1205 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1254
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYT 77
P+ +R+ I++ P L I I+ N + M M P E ++FTGI+T
Sbjct: 560 PWVKFKRIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR++ ++
Sbjct: 620 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLVHKIQ 675
>gi|395517040|ref|XP_003762690.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like [Sarcophilus harrisii]
Length = 1973
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 140/183 (76%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ IFRFSAT AL +L PF+PIRR AI + VH LFS FI+ TI+ NC+ M
Sbjct: 96 TFIVLNKGRTIFRFSATWALGLLSPFHPIRRTAIKVSVHSLFSFFIMMTIMVNCVFMTKT 155
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP + E +FTGIYTFES +K++ARGF L FTYLRD WNWLDF VI+LAY+ DL
Sbjct: 156 ETPP--TVEYVFTGIYTFESLIKILARGFCLNEFTYLRDPWNWLDFCVISLAYIAEVTDL 213
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ALRTFRV RALKTV+++PGLK IVGA+I SVK L DV++LT+F LSVFAL+ LQ
Sbjct: 214 RGVSALRTFRVFRALKTVSVIPGLKVIVGALIHSVKKLADVMVLTLFCLSVFALVALQLF 273
Query: 181 RGK 183
+G
Sbjct: 274 KGN 276
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + T+++ +++FT I+ E
Sbjct: 1163 LRKTCYHIVEHNWFESFIIFMILLSSGALAFEDVYLENRRTLKAILDFADMVFTYIFILE 1222
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF++ I+L T+G D+G + +LRT R LR
Sbjct: 1223 MLLKWVAYGFK----TYFTNAWCWLDFLIVDVSMISLIATTLGYSDIGPIKSLRTLRALR 1278
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1279 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGK 1328
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPT----IESTEVIFTGIYTFESAVKVMARG 88
I++ P L + I+ N + M M TP+ +++ + FT I+T E +K++A
Sbjct: 729 IVMDPFTELIVTLCIVANTLFMSMEHYNMTPSFSWMLQTGNIFFTVIFTAEMVLKIIA-- 786
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ Y + +WN D +++ L+ V +G+ +L+ LR+FR+LR K P L +
Sbjct: 787 --FHPYYYFQRSWNIFDSVIVTLSLVELGLPQKASLSVLRSFRLLRVFKLAKSWPTLNNL 844
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ ++ + +FA++G Q
Sbjct: 845 IKIIGNSVGALGNLTLILAIIVFIFAVVGKQ 875
>gi|103471981|ref|NP_956426.2| sodium channel, voltage-gated, type I, alpha [Danio rerio]
gi|76786313|gb|ABA54918.1| voltage-gated sodium channel type I alpha subunit Nav1.1La [Danio
rerio]
Length = 1955
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VVSK K+I+RF+AT AL++ FN +RR++I ILVH LF+ II TIL NC M+
Sbjct: 90 TFIVVSKKKEIYRFNATPALYIFSSFNLLRRISIQILVHFLFNFIIICTILANCAFMVYT 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP ++ E +FTGIYT E+ VK+ ARGF + FT+LRD WNWLDFIVI +AYVT +D
Sbjct: 150 QTPDWAKNVEYVFTGIYTLEALVKITARGFCVGRFTFLRDPWNWLDFIVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LG+++ALR FRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGSVSALRAFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALVGLQ 268
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 20/180 (11%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM-------PGTP 63
F F+ +W P + I+ V I++ P LFI I+ N + M M P +
Sbjct: 703 FEFAENYLIWDCSPTWLRIKEVVHMIVMDPFADLFITICIVINTVFMAMECYPMDGPYSS 762
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LG 121
+ + V+F GI+T E KV+A L+ ++Y + WN D I++ L+ + + + L
Sbjct: 763 MLSTANVVFIGIFTAEMIFKVIA----LDPYSYFLEGWNIFDSIIVTLSLMELCLANVLS 818
Query: 122 NLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR FR+LR K P L I+G + ++ NL V+ + +F +FA++G+Q
Sbjct: 819 GIGFLRPFRLLRVFKLAKSWPTLNMLIKIIGNSLGALSNLTLVLAIIVF---IFAVVGMQ 875
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 19/173 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + L TI E + +FT I+ E
Sbjct: 1156 LRQTCYNIVEHSWFETFIVFMILLSSGALAFEDIYLDTRKSVKTILEFADKVFTYIFILE 1215
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAA---LRTFRVLR 133
+K +A GF Y + W WLDF+++ ++ +++ ++ L+A LRT R R
Sbjct: 1216 MLLKWVAYGFA----KYFTNLWCWLDFVIVDVSLISLVANALNYSELSAIKSLRTLRAFR 1271
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSD 186
L+ ++ G++ +V A++ ++ ++ +V+++ + +F+++G+ GK S+
Sbjct: 1272 PLRALSRFDGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVNFFAGKFSE 1324
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-PTIEST------EVIFTGIYT 77
P N I+ + ++ F +FI+ I N + M++ +IE T VIF ++T
Sbjct: 1472 PKNKIQGLIFDLVTKQAFDIFIMVLIWLNMVTMMLETEDQSIEMTRALYWINVIFIVLFT 1531
Query: 78 FESAVKVMA-RGFILESFTYLRDAWNWLDFIVIALAYVTMG---------IDLGNLAALR 127
E +K++A R + FT WN DFIV+ L+ V M + +R
Sbjct: 1532 TECVLKMIALRHYF---FTV---GWNVFDFIVVILSIVGMSLTEVIKKYFVSPTLFRVIR 1585
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R+ R L+ + G++T++ A++ S+ L ++ +L + ++A+ G+ +
Sbjct: 1586 LARIGRVLRLIRSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN 1637
>gi|432092524|gb|ELK25139.1| Sodium channel protein type 5 subunit alpha [Myotis davidii]
Length = 1845
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/181 (63%), Positives = 144/181 (79%), Gaps = 4/181 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH PL + I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSYPL-RMLIMCTILTNCVFMA 150
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T
Sbjct: 151 QHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEF 210
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GL
Sbjct: 211 VDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGL 270
Query: 178 Q 178
Q
Sbjct: 271 Q 271
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+ S ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LRSFRLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1099 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1158
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1159 MLLKWVAYGFK----KYFTNAWCWLDFLIVNVSLISLVANTLGFSEMGPIKSLRTLRALR 1214
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1215 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1264
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ ++++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 649 IKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMT 708
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVL 132
K++A L+ + Y + WN D I++ L+ + +G+ +GNL+ LR+FR++
Sbjct: 709 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLV 756
>gi|281348730|gb|EFB24314.1| hypothetical protein PANDA_010521 [Ailuropoda melanoleuca]
Length = 1916
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 148/195 (75%), Gaps = 17/195 (8%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP----------------LFSL 44
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+
Sbjct: 6 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSYPFLQMRTDCSICMVTVFSM 65
Query: 45 FIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNW 103
I+ TILTNC+ M P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNW
Sbjct: 66 IIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNW 125
Query: 104 LDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
LDF VI +AY+T ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+I
Sbjct: 126 LDFSVIMMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMI 185
Query: 164 LTMFSLSVFALMGLQ 178
LT+F LSVFAL+GLQ
Sbjct: 186 LTVFCLSVFALIGLQ 200
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 661 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 720
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 721 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 776
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 777 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 832
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1124 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1183
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1184 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1239
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1240 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1289
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1443 PLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1502
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1503 CECVLKM----FALRHY-YFTVGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1555
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1556 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1608
>gi|123913391|sp|Q2XVR7.1|SC4AA_FUGRU RecName: Full=Sodium channel protein type 4 subunit alpha A;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4a
gi|78172670|gb|ABB29441.1| voltage-gated sodium channel Nav1.4a [Takifugu rubripes]
Length = 1892
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVV+KG I+RF+A A ++L PF+ +RR AI IL+H LFS I+ TIL+NC+ M M
Sbjct: 86 TFVVVTKGNTIYRFNAEPACYILSPFSLVRRGAIKILIHSLFSTLIMITILSNCVFMTMS 145
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 146 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGPFTFLRDPWNWLDFMVISMAYITEFVD 205
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIV A+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 206 LGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKKMVDVMILTVFALAVFALVGLQ 264
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1059 LRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTVKIVLEFADKVFTFIFVIE 1118
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ ++ MG DLG + +LRT R LR
Sbjct: 1119 MLLKWVAYGFK----TYFTNAWCWLDFFIVDISLISLSANLMGFSDLGPIKSLRTLRALR 1174
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1175 PLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1224
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMAR 87
++++ P L I I+ N + M M P E + ++FTGI+ E K++A
Sbjct: 607 FVVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFDYMLSVGNLVFTGIFAAEMFFKLIA- 665
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKT 146
++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K P L
Sbjct: 666 ---MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM 722
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + SV L ++ ++ + +FA++G+Q
Sbjct: 723 LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 754
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 9 KDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTNC 54
KDIF + A L P PI R A I + F +FI+ I N
Sbjct: 1348 KDIFMTEEQKKYYEAMKKLGSKKPQKPIPRPANLIQGLVFDFISQQFFDIFIMVLICLNM 1407
Query: 55 ILMIMP---GTPTIE----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFI 107
+ M++ +P E V F ++T E +K+ F L + + + WN DFI
Sbjct: 1408 VTMMVETDDQSPAKEDFLFKVNVAFIVVFTGECTLKL----FALRHY-FFTNGWNIFDFI 1462
Query: 108 VIALAYV-TMGIDLGN--------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNL 158
V+ L+ TM D+ +R R+ R L+ + G++T++ A++ S+ L
Sbjct: 1463 VVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGARGIRTLLFALMMSLPAL 1522
Query: 159 RDVIILTMFSLSVFALMGLQD 179
++ +L + +F++ G+ +
Sbjct: 1523 FNIGLLLFLIMFIFSIFGMSN 1543
>gi|224054968|ref|XP_002198054.1| PREDICTED: sodium channel protein type 2 subunit alpha isoform 4
[Taeniopygia guttata]
Length = 1982
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 139/179 (77%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K K I RFSAT AL++L PFN RR+AI ILVH LF+ I+ TIL NC+LM
Sbjct: 92 TFIVLDKAKTIHRFSATPALYLLSPFNFTRRLAIKILVHSLFNKVIMLTILANCVLMTWS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFE VKV ARGF + FT LRD WNWLDF+VI AY+T ++
Sbjct: 152 NLPEWAKNVEYTFTGIYTFEFLVKVFARGFCINDFTCLRDPWNWLDFVVICFAYITEFVN 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 270
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 13 RFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------T 64
+F+ T +W +P+ ++ V +I++ P L + I+ N + M M P
Sbjct: 723 KFAHTFLIWECCEPWLKVKSVVEFIVMDPFVDLAVTVCIVLNTLFMAMEHYPMTGHFDAV 782
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNL 123
+ ++FTGI+ E +K++A + F Y + WN D ++ L+ + + ++ L
Sbjct: 783 LSVGNLVFTGIFAAEMVLKIIA----MHPFNYFQVGWNIFDSFIVTLSLAELFLSNVEGL 838
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 839 SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I + + IFT ++ E
Sbjct: 1178 LRKTCYRIVEHSWFESFIVFMILLSSGALAFEDIYIEQHKTIKILLDYADKIFTYVFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V+ +G + G + +LRT R LR
Sbjct: 1238 MVLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVATALGFSEFGAIKSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALTGAIPSIMNVLLVCLTFWLIFSIMGVNLFAGK 1343
>gi|342837659|tpg|DAA34919.1| TPA_inf: voltage-dependent sodium channel SCN8A-like protein
[Xenopus (Silurana) tropicalis]
Length = 1961
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 144/179 (80%), Gaps = 3/179 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSA AL++L PFNP+R+ AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNRGKTIFRFSAAPALYILSPFNPLRKFAIKILIH-LFSMIIMCTILTNCVFMTFS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSV AL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVIAGLKTIVGALIQSVKKLSDVMILTVFCLSV-ALIGLQ 269
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 95/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E+
Sbjct: 704 YKFADTYLIWTCCPLWIRIKTIVNMIVMDPFVDLTITICIVLNTLFMAMEHYPMTPHFEN 763
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 764 VLVVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLQDVEG 819
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 820 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 875
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1168 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDVYIEQRKTIRTILEYADKVFTYIFILE 1227
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF+ + +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1228 MLLKWLAYGFV----KFFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALR 1283
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1284 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1333
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIY-ILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R AI+ I+ F + I+ I N
Sbjct: 1457 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGAIFDIITQQAFDIVIMILICLN 1516
Query: 54 CILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + T+ V+F +T E +K+ A L + Y WN DF
Sbjct: 1517 MVTMMVETDDQSDYTDNVLYWINVVFIVFFTTECVLKLCA----LRHY-YFTIGWNIFDF 1571
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1572 VVVILSIV--GMFLADLITKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1629
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + +F++ G+ +
Sbjct: 1630 PALFNIGLLLFLVMFIFSIFGMSN 1653
>gi|119584945|gb|EAW64541.1| sodium channel, voltage-gated, type V, alpha (long QT syndrome 3),
isoform CRA_b [Homo sapiens]
Length = 1440
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 144/183 (78%), Gaps = 5/183 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILV----HPLFSLFIITTILTNCIL 56
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ IL+ LF++ I+ TILTNC+
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILLSLTPRTLFNMLIMCTILTNCVF 151
Query: 57 MIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
M P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T
Sbjct: 152 MAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTT 211
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+
Sbjct: 212 EFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALI 271
Query: 176 GLQ 178
GLQ
Sbjct: 272 GLQ 274
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI- 118
+E + +FT ++ E +K +A GF Y +AW WLDF+++ ++ V T+G
Sbjct: 852 LEYADKMFTYVFVLEMLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFA 907
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++G + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 908 EMGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 967
Query: 179 DSRGK 183
GK
Sbjct: 968 LFAGK 972
>gi|119584946|gb|EAW64542.1| sodium channel, voltage-gated, type V, alpha (long QT syndrome 3),
isoform CRA_c [Homo sapiens]
Length = 1439
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 144/183 (78%), Gaps = 5/183 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILV----HPLFSLFIITTILTNCIL 56
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ IL+ LF++ I+ TILTNC+
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILLSLTPRTLFNMLIMCTILTNCVF 151
Query: 57 MIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
M P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T
Sbjct: 152 MAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTT 211
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+
Sbjct: 212 EFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALI 271
Query: 176 GLQ 178
GLQ
Sbjct: 272 GLQ 274
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI- 118
+E + +FT ++ E +K +A GF Y +AW WLDF+++ ++ V T+G
Sbjct: 851 LEYADKMFTYVFVLEMLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFA 906
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++G + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 907 EMGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 966
Query: 179 DSRGK 183
GK
Sbjct: 967 LFAGK 971
>gi|297691869|ref|XP_002823317.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 8
subunit alpha [Pongo abelii]
Length = 1934
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 145/184 (78%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH-----PLFSLFIITTILTNCI 55
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H + S+ I+ T LTNC+
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSYPFRQIISMIIMCTXLTNCV 152
Query: 56 LMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
M ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYV
Sbjct: 153 FMTFSNPRDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYV 212
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
T +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL
Sbjct: 213 TEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFAL 272
Query: 175 MGLQ 178
+GLQ
Sbjct: 273 IGLQ 276
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 729 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 788
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 789 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 844
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 845 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 900
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC------ILMIMPGTPTI----ESTEVIFTGIYTF 78
+R+ I+ H F FII IL + + + TI E + +FT I+
Sbjct: 1140 LRKTCFLIVEHNWFETFIIFMILLSSGALPXXXXIYIEQRKTIRTIREYADKVFTYIFIL 1199
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVL 132
E +K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R L
Sbjct: 1200 EMLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRAL 1255
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
R L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 RPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
>gi|81238395|gb|ABB60039.1| voltage-gated sodium channel type V alpha polypeptide [Oryctolagus
cuniculus]
Length = 289
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 136/169 (80%), Gaps = 1/169 (0%)
Query: 11 IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-IESTE 69
IFRFSAT+AL++L PF+PIRR A+ ILVH LFSL I+ TILTNC+ M P + E
Sbjct: 2 IFRFSATNALYLLSPFHPIRRAAVKILVHSLFSLLIMCTILTNCVFMAQHDPPPWTKYVE 61
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTF 129
FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +DLGN++ALRTF
Sbjct: 62 YAFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTF 121
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 122 RVLRALKTISVIAGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 170
>gi|260782818|ref|XP_002586478.1| hypothetical protein BRAFLDRAFT_249583 [Branchiostoma floridae]
gi|229271591|gb|EEN42489.1| hypothetical protein BRAFLDRAFT_249583 [Branchiostoma floridae]
Length = 432
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 141/191 (73%), Gaps = 10/191 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--------LFSLFIITTILT 52
TFVV++K + IFRFS T+ ++L PFNP+RR+A++ L H LFS ++ TIL
Sbjct: 75 TFVVIAKDRTIFRFSTTNGCFLLSPFNPLRRLALFTLTHSYPSATCLTLFSTLVMLTILV 134
Query: 53 NCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
NC+ M + P I TE IF GIYT E VK+ ARG+ L+ FTYLRD WNWLDF V+ LA
Sbjct: 135 NCVFMALNDPPKI--TEFIFNGIYTIEMLVKLSARGYALQHFTYLRDPWNWLDFAVVVLA 192
Query: 113 YVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
YVTM +DLGNL+ LRTFRVLRALKT+++VPGLKTIV A+I+SV NLRDVIILT F L VF
Sbjct: 193 YVTMFVDLGNLSVLRTFRVLRALKTISVVPGLKTIVNALIQSVINLRDVIILTSFGLCVF 252
Query: 173 ALMGLQDSRGK 183
AL+GLQ G+
Sbjct: 253 ALVGLQLYMGQ 263
>gi|334343636|ref|XP_001373143.2| PREDICTED: sodium channel protein type 10 subunit alpha-like
[Monodelphis domestica]
Length = 2149
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 138/183 (75%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ IFRFSAT AL +L PF+PIRRVAI + VH LFSLFI+ TIL NC+ M
Sbjct: 94 TFIVLNKGRTIFRFSATQALGLLSPFHPIRRVAIKLSVHSLFSLFIMVTILVNCVFMTHR 153
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TP + E +FTGIYTFES +K++ARGF L FTYLRD WNWLDF VI LAY +
Sbjct: 154 ETPPV--VEYVFTGIYTFESLLKILARGFCLNEFTYLRDPWNWLDFGVIFLAYFAEITEF 211
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ALRTFRV RALKTV+++PGLK IVGA+I SVK L DV++LT+F LSVFAL+ LQ
Sbjct: 212 RGASALRTFRVFRALKTVSVIPGLKVIVGALIHSVKKLADVMVLTVFCLSVFALVALQLF 271
Query: 181 RGK 183
+G
Sbjct: 272 KGN 274
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1042 LRKTCYHIVEHNWFESFIIFMILLSSGALAFEDVNLEERATVKAILEFADRVFTYIFILE 1101
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1102 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSMISLIANTLGYSEIGPIKSLRTLRALR 1157
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1158 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFSGK 1207
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 13 RFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P+ + + YI+ P L + I+TN + M M +
Sbjct: 537 RFAQKYLIWECWPPWVKFKNLVEYIVKDPFTELIVTLCIVTNTLFMSMEHYNMTAAFSFM 596
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNL 123
+++ + FT I+T E K++A + Y + +WN D +++ L+ V +G+ +L
Sbjct: 597 LQAGNIFFTFIFTAEMVFKIIA----FHPYYYFQKSWNIFDSVIVTLSLVELGLPQKASL 652
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G Q G
Sbjct: 653 SVLRSFRLLRVFKLAKSWPTLNNLIKIIGNSVGALGNLTLILAIIVFIFAVVGKQ-LFGD 711
Query: 184 KSDESHDK 191
D+ DK
Sbjct: 712 NYDKLRDK 719
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE-STEVI------FTGIYT 77
P N + I+ F + I+ I N I M++ E T+++ F ++T
Sbjct: 1361 PLNKCQGFVFDIVTQQAFDIAIMVLICLNMITMMVETDSQSEVKTKILNRINHFFVAVFT 1420
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GI--DLGNLAALRTFRVL 132
E +K+ A + Y + WN DFIV+ L+ V++ GI L N + FRV+
Sbjct: 1421 AECVLKMFAL-----RYYYFINGWNIFDFIVVILSIVSLVFSGIMKSLENYFSPTLFRVI 1475
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1476 RLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM 1526
>gi|47207766|emb|CAG05433.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1180
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 148/209 (70%), Gaps = 31/209 (14%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-------------------- 40
TF+V++K K IFRFSAT +L++L PFN +RR+AI IL+H
Sbjct: 95 TFIVLNKQKTIFRFSATPSLYILSPFNLLRRIAIKILIHSYPFKCFTFSVLYDCYLGRIA 154
Query: 41 ----------LFSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGF 89
LFS+ I+ TILTNCI M P + E FTGIYTFES K++ARGF
Sbjct: 155 HLFLNSGLLTLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLTKIVARGF 214
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVG 149
++ FT+LRDAWNWLDF+VI++AY+T +DLGN++ALRTFRVLRALKT++++PGLKTIVG
Sbjct: 215 AIDDFTFLRDAWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG 274
Query: 150 AVIESVKNLRDVIILTMFSLSVFALMGLQ 178
A+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 275 ALIQSVKKLSDVMILTVFCLSVFALIGLQ 303
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 14/170 (8%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTP---- 63
++FS T +W P + I+ + I++ P L I I+ N + M M P TP
Sbjct: 750 YKFSNTFLIWECCPLWLKIKHIVYLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPHFTD 809
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ + ++FTGI+ E K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 810 VLATGNLVFTGIFAGEMFAKLIA----MDPYYYFQEGWNCFDGFIVTLSLVELGLANVEG 865
Query: 123 LAALRTFRVLRAL-KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
L+ LR+FRV+ L K+ + L I+G + ++ NL V+ + +F +V
Sbjct: 866 LSVLRSFRVVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV 915
>gi|119584947|gb|EAW64543.1| sodium channel, voltage-gated, type X, alpha [Homo sapiens]
Length = 1956
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 661 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 718
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 719 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 776
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 777 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 807
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1429 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICL 1488
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1489 NMITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1543
Query: 106 FIVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIE 153
FIV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++
Sbjct: 1544 FIVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMM 1602
Query: 154 SVKNLRDV---IILTMFSLSVFALMGLQDSR 181
S+ L ++ + L MF S+F + R
Sbjct: 1603 SLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1633
>gi|110835710|ref|NP_006505.2| sodium channel protein type 10 subunit alpha [Homo sapiens]
gi|205371821|sp|Q9Y5Y9.2|SCNAA_HUMAN RecName: Full=Sodium channel protein type 10 subunit alpha;
AltName: Full=Peripheral nerve sodium channel 3;
Short=PN3; Short=hPN3; AltName: Full=Sodium channel
protein type X subunit alpha; AltName:
Full=Voltage-gated sodium channel subunit alpha Nav1.8
gi|225000002|gb|AAI72222.1| sodium channel, voltage-gated, type X, alpha subunit [synthetic
construct]
Length = 1956
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 661 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 718
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 719 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 776
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 777 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 807
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 42/210 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1430 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLN 1489
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+++ F ++T E +K+ F L + Y + WN DF
Sbjct: 1490 MITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1544
Query: 107 IVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIES 154
IV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++ S
Sbjct: 1545 IVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1603
Query: 155 VKNLRDV---IILTMFSLSVFALMGLQDSR 181
+ L ++ + L MF S+F + R
Sbjct: 1604 LPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1633
>gi|4838145|gb|AAD30863.1|AF117907_1 tetrodotoxin-resistant voltage-gated sodium channel [Homo sapiens]
Length = 1956
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 661 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 718
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 719 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 776
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 777 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 807
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVI------FTGIYT 77
P N + I+ F + I+ I N I +M+ + E T+++ F ++T
Sbjct: 1461 PLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVETDDQSEEKTKILGKINQFFVAVFT 1520
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTF-------- 129
E +K+ F L + Y + WN DFIV+ L+ ++ I L +L+++
Sbjct: 1521 GECVMKM----FALRQY-YFTNGWNVFDFIVVVLSIASL-IFSAILKSLQSYFSPTLFRV 1574
Query: 130 ----RVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFALMGLQDSR 181
R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F + R
Sbjct: 1575 IRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1633
>gi|123898107|sp|Q2XVR4.1|SC4AB_TETNG RecName: Full=Sodium channel protein type 4 subunit alpha B;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4b
gi|78172676|gb|ABB29444.1| voltage-gated sodium channel Nav1.4b [Tetraodon nigroviridis]
Length = 1715
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG I RF+A +L++L PFN +R AI ILVH LFSLFI+ TILTNC+ M +
Sbjct: 87 TFIVLSKGNVIHRFNAESSLYLLSPFNSMRIFAIKILVHSLFSLFIMATILTNCVFMTLS 146
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FT IYTFE+ +KV++RGF + FT+L+D WNWLDF+VI++AY+T +D
Sbjct: 147 DPPAWSKTVEYVFTFIYTFEATIKVVSRGFCVGQFTFLKDPWNWLDFMVISMAYLTELVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ LRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L D ++LT+F LSVFAL+GLQ
Sbjct: 207 LGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADAMVLTVFCLSVFALIGLQ 265
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IRR I+ + F FI+ IL + + +E + +FT ++ E
Sbjct: 903 IRRACFIIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKTILEYADKVFTYVFVVE 962
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K A GF +Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 963 MVLKWFAYGFK----SYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALR 1018
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK-------KSD 186
L+ ++ G++ +V A++ +V ++ +V+++ + +F++MG+ GK S
Sbjct: 1019 PLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCFNETSQ 1078
Query: 187 ESHDK 191
E DK
Sbjct: 1079 EQFDK 1083
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++R I++ P L I I+ N I M M P E ++FTGI+T E
Sbjct: 504 LKRCLSAIVMDPFVDLGITICIILNTIFMAMEHYPMSADFEELLSVGNLVFTGIFTCEMV 563
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+K++A ++ + Y + WN D I++ ++ V +G+ ++ L+ LR+FR++R K
Sbjct: 564 LKILA----MDPYFYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKS 619
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 620 WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 657
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N ++ + ++ +F +FI+ I N + M++ + E VIF I+T
Sbjct: 1223 PENALQGLVFDLVTKQIFDVFIMVLICLNMVTMMVETDEQTKEKEDILYWINVIFIVIFT 1282
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K +A Y WN DF+V+ L+ +G+ L ++ +
Sbjct: 1283 TECILKTIAL-----RRHYFSIGWNVFDFVVVILS--ILGLLLADIIEKYFVSPTLFRVI 1335
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1336 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1388
>gi|123916267|sp|Q2XVR6.1|SC4AB_FUGRU RecName: Full=Sodium channel protein type 4 subunit alpha B;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4b
gi|78172672|gb|ABB29442.1| voltage-gated sodium channel Nav1.4b [Takifugu rubripes]
Length = 1719
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG I+RF+A +L++L PFN +R VAI IL+H LFSLFI+ TILTNC M +
Sbjct: 87 TFIVLSKGNIIYRFNAESSLYLLSPFNALRIVAIKILIHSLFSLFIMATILTNCAFMTLS 146
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FT IYTFE+ +K+++RGF + FT+L+D WNWLDF+VI++AY+T +D
Sbjct: 147 DPPAWSKTMEYVFTFIYTFEATIKILSRGFCVGKFTFLKDPWNWLDFMVISMAYLTELVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ LRTFRVLRALKT+ ++PGLKTIVGA+I+SV+ L D ++LT+F LSVFAL+GLQ
Sbjct: 207 LGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVRKLADAMVLTVFCLSVFALIGLQ 265
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 19/172 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IRR I+ + F FI+ IL + + +E + +FT ++ E
Sbjct: 907 IRRTCFSIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKSILEYADKVFTYVFVME 966
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K A GF +Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 967 MVLKWFAYGFK----SYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALR 1022
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
L+ ++ G++ +V A++ +V ++ +V+++ + +F++MG+ GK S
Sbjct: 1023 PLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFS 1074
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARG 88
I++ P L I I+ N + M M P E ++FTGI+T E K++A
Sbjct: 509 IVMDPFVDLGITICIILNTVFMAMEHYPMSADFEELLSVGNLVFTGIFTGEMVFKILA-- 566
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
++ + Y + WN D I++ ++ V +G+ ++ L+ LR+FR++R K P L +
Sbjct: 567 --MDPYFYFQVGWNIFDSIIVTISLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNML 624
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ ++ + +FA++G+Q
Sbjct: 625 IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 655
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P NP + + ++ +F +FI+ I N + M++ + E V+F I+T
Sbjct: 1227 PENPFQGLVFDLVTKQIFDVFIMVLICLNMVTMMVETDEQSDKKEEVLYWINVVFILIFT 1286
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K++A Y WN DF+V+ L+ +G+ L ++ +
Sbjct: 1287 TECTLKIIAL-----RRHYFSIGWNIFDFVVVILS--ILGLLLADIIEKYFVSPTLFRVI 1339
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1340 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1392
>gi|281353936|gb|EFB29520.1| hypothetical protein PANDA_002584 [Ailuropoda melanoleuca]
Length = 2030
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 144/199 (72%), Gaps = 21/199 (10%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-------------------- 40
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSYPLHGPAGPPHWAFLDLRAT 151
Query: 41 LFSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRD 99
LF+ I+ TILTNC+ M P + E FT IYTFES VK++ARGF L +FT+LRD
Sbjct: 152 LFNTLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRD 211
Query: 100 AWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLR 159
WNWLDF VI +AY T +DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L
Sbjct: 212 PWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLA 271
Query: 160 DVIILTMFSLSVFALMGLQ 178
DV++LT+F LSVFAL+GLQ
Sbjct: 272 DVMVLTVFCLSVFALIGLQ 290
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 709 RFAQRYLIWECCPLWMSIKQRVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 768
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 769 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 824
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 825 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 879
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1207 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV-----IALAYVTMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L T+G ++G + +LRT R LR
Sbjct: 1267 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>gi|403278952|ref|XP_003931043.1| PREDICTED: sodium channel protein type 10 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1966
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 138/186 (74%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIRVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+++K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TQTELP--EKIEYVFTAIYTFEASIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1150 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1209
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGI----DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L +T I ++ + ALRT R LR
Sbjct: 1210 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALR 1265
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1266 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1315
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESA 81
++ + ++ P L I I+ N I M M + T E+ ++FT ++T E
Sbjct: 663 LKTILFELVTDPFAELTITLCIVVNTIFMAMEYHGMSSTFEAMLYIGNIVFTIVFTAEMV 722
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
K++A + + Y + WN D +++ ++ + +G+ G+L+ LR+FR+LR K
Sbjct: 723 FKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELGVARKGSLSVLRSFRLLRVFKLAKS 778
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ I+ + VFAL+G Q
Sbjct: 779 WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 816
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1438 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICL 1497
Query: 53 NCILMIMPGTPTIESTEVIFTGIYTFESAV---KVMARGFILESFTYLRDAWNWLDFIVI 109
N + M++ E I I F AV + + + F L + Y + WN DFIV+
Sbjct: 1498 NMVTMMVETDEQSEEKTKILGKINQFFVAVFTGECVTKMFALRQY-YFTNGWNVFDFIVV 1556
Query: 110 ALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNL 158
L+ ++ L +L + +R R+ R L+ + G++T++ A++ S+ L
Sbjct: 1557 VLSIASLVFSAILKSLQSYLSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPAL 1616
Query: 159 RDV---IILTMFSLSVFALMGLQDSR 181
++ + L MF S+F + R
Sbjct: 1617 FNIGLLLFLVMFIYSIFGMSSFPHVR 1642
>gi|355559771|gb|EHH16499.1| hypothetical protein EGK_11787 [Macaca mulatta]
Length = 1956
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALINSVKKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGI----DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L +T I ++ + ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 661 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 718
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 719 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 776
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 777 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 807
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVI------FTGIYT 77
P N + I+ F + I+ I N I +M+ + E T+++ F ++T
Sbjct: 1461 PLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVETDDQSEEKTKILGKINQFFVAVFT 1520
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-----DLGNLAALRTFRVL 132
E +K+ F L + Y + WN DFIV+ L+ ++ L N + FRV+
Sbjct: 1521 GECVMKM----FALRQY-YFTNGWNVFDFIVVVLSIASLVFSAILKSLQNYFSPTLFRVI 1575
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFALMGLQDSR 181
R L+ + G++T++ A++ S+ L ++ + L MF S+F + R
Sbjct: 1576 RLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1633
>gi|355746803|gb|EHH51417.1| hypothetical protein EGM_10783 [Macaca fascicularis]
Length = 1956
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALINSVKKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGI----DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L +T I ++ + ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 661 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 718
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 719 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 776
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 777 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 807
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVI------FTGIYT 77
P N + I+ F + I+ I N I +M+ + E T+++ F ++T
Sbjct: 1461 PLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVETDDQSEEKTKILGKINQFFVAVFT 1520
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-----DLGNLAALRTFRVL 132
E +K+ F L + Y + WN DFIV+ L+ ++ L N + FRV+
Sbjct: 1521 GECVMKM----FALRQY-YFTNGWNVFDFIVVVLSIASLVFSAILKSLQNYFSPTLFRVI 1575
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFALMGLQDSR 181
R L+ + G++T++ A++ S+ L ++ + L MF S+F + R
Sbjct: 1576 RLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1633
>gi|281351654|gb|EFB27238.1| hypothetical protein PANDA_013931 [Ailuropoda melanoleuca]
Length = 1833
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 145/189 (76%), Gaps = 11/189 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFS----------LFIITTI 50
TF+V++KGK IFRFSA AL++L PF+ IRR AI +L+H + +FI+ TI
Sbjct: 92 TFIVLNKGKAIFRFSAAPALYMLSPFSIIRRSAIKVLIHSYPTQVGRVQGQEGMFIMVTI 151
Query: 51 LTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI 109
LTNC+ M M P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI
Sbjct: 152 LTNCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVI 211
Query: 110 ALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
+AY+T +DLGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L
Sbjct: 212 TMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCL 271
Query: 170 SVFALMGLQ 178
SVFAL+GLQ
Sbjct: 272 SVFALVGLQ 280
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E ++FTGI+T
Sbjct: 555 PWVKFKSIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 614
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 615 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 670
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 671 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 712
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT ++ E
Sbjct: 1009 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYVFILE 1068
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1069 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1124
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1125 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1174
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I +V+ + F IT ++ C+
Sbjct: 1303 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDCVTKQAFDITIMILICLN 1362
Query: 57 MIMPGTPTIESTE----------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
M+ T + ++ ++F I+T E A+K++A L + Y WN DF
Sbjct: 1363 MVTMMVETDDQSQLKVDILYNINMVFIIIFTGECALKMLA----LRQY-YFTVGWNIFDF 1417
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1418 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1475
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1476 PALFNIGLLLFLVMFIYSIFGMSN 1499
>gi|390476506|ref|XP_002759796.2| PREDICTED: sodium channel protein type 10 subunit alpha [Callithrix
jacchus]
Length = 1921
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 138/186 (74%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+++K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TQTELP--EKIEYVFTAIYTFEASIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N + M M + T E+ ++FT ++T E K++A
Sbjct: 666 LVTDPFAELTITLCIVVNTVFMAMEYHGMSSTFEAMLYIGNIVFTVVFTAEMVFKIIA-- 723
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 724 --FDPYYYFQKKWNIFDCIIVTVSLLELGVARKGSLSVLRSFRLLRVFKLAKSWPTLNTL 781
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 782 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 812
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +F I+ FE
Sbjct: 1146 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFPFIFVFE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+K +A GF Y +AW WLDF+++
Sbjct: 1206 MLLKWVAYGFK----KYFTNAWCWLDFLIV 1231
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1393 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDVTIMVLICL 1452
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1453 NMITMMVETDEQSEEKTKILGKINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1507
Query: 106 FIVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIE 153
FIV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++
Sbjct: 1508 FIVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMM 1566
Query: 154 SVKNLRDV---IILTMFSLSVFALMGLQDSR 181
S+ L ++ + L MF S+F + R
Sbjct: 1567 SLPALFNIGLLLFLVMFIYSIFGMTSFPHVR 1597
>gi|343098412|tpg|DAA34937.1| TPA_inf: voltage-dependent sodium channel SCN10A [Anolis
carolinensis]
Length = 1729
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 144/192 (75%), Gaps = 11/192 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT ALW+ PF+PIRR+AI ILVH +++FI+ TI TNC+ M +
Sbjct: 82 TFMVLNKGKAIFRFTATRALWIFSPFHPIRRLAIKILVHS-YTMFIMVTIFTNCVFMTLS 140
Query: 61 GTPTIESTEV-------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA- 112
+P + E FTGIYTFE +K++ARGF L FT+LRD WNWLDF VI +A
Sbjct: 141 ESPQSGTNETSSSKYVFTFTGIYTFECLIKILARGFCLNEFTFLRDPWNWLDFSVIMMAF 200
Query: 113 --YVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLS 170
Y+ IDLGN++ LR FRVLRALKT++++PGLK IVGA+I+S+K L DV+ILT+F LS
Sbjct: 201 YRYIGAFIDLGNVSVLRMFRVLRALKTISVIPGLKVIVGALIQSIKKLADVMILTVFCLS 260
Query: 171 VFALMGLQDSRG 182
VFAL+GLQ +G
Sbjct: 261 VFALIGLQLFKG 272
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + + P I E + IFT I+ E
Sbjct: 849 LRKTCYQIVEHNWFESFIVFMILLSSGALAFEDIYLTEKPRIKMMLEYADKIFTYIFILE 908
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ ++G + +LRT R LR
Sbjct: 909 MLLKWVAYGF----HKYFTNAWCWLDFLIVDVSLVSLVASLAGKSEIGAMKSLRTLRALR 964
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F+++G+ GK
Sbjct: 965 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVSLFAGK 1014
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIM------PGTPTIES-TEVIFTGIYTFESAV 82
++V+I+++ P L I I+ N + M + PG + S IFTGI+T E +
Sbjct: 451 KKVSIFVM-DPFTDLTITLCIVINTLFMALEHYKMTPGFKLMLSIGNKIFTGIFTAEVIL 509
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIV 141
K++A ++ + Y + + N D IV+ ++ + + I G LRT R+LR K
Sbjct: 510 KIIA----MDPYYYFQQSSNIFDSIVVFISIIELSIPKKGTFTVLRTLRLLRVFKLAKSW 565
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ ++ S+ L ++ ++ + +FA+ G+Q
Sbjct: 566 PTLNTLIKIILNSINALSNLTLVLALIVFIFAVFGMQ 602
>gi|432934598|ref|XP_004081947.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oryzias latipes]
Length = 1937
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 137/183 (74%), Gaps = 5/183 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K K IFRF+A AL+ L PFNPIRR++I ILVH LF++ I+ TILTNC LM
Sbjct: 89 TFIVLNKRKMIFRFNAAPALYFLGPFNPIRRLSIKILVHSLFNVLIMCTILTNCALMTRS 148
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ ST E FT IYTFES VK++ARGF L FT+LRD WNWLDF VI LAY+
Sbjct: 149 SSADSNSTWTKPVEYTFTAIYTFESLVKILARGFCLGEFTFLRDPWNWLDFSVIVLAYLN 208
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
D G L+ALRTFRVLRA K ++++PGLKTIVGA+ +SVK L DV+ILT+F LSVFAL+
Sbjct: 209 EFADFGRLSALRTFRVLRAFKAISVIPGLKTIVGALFQSVKKLTDVMILTVFCLSVFALV 268
Query: 176 GLQ 178
GLQ
Sbjct: 269 GLQ 271
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + +E + +FT I+ E
Sbjct: 1167 LRQTCFRIVEHSWFESFIIFMILLSSGALAFEDVYSEQRKTIKIILEFADKMFTYIFILE 1226
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG------IDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ DLG + +LRT R LR
Sbjct: 1227 MLLKWLAYGFA----KYFTNAWCWLDFLIVDVSLVSLVANALELTDLGAIKSLRTLRALR 1282
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1283 PLRALSRFEGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1332
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P + I++ I++ P L I I+ N + M M P +
Sbjct: 707 YKFAENFLIWDCCPAWQKIKKFVKLIVMDPFADLTITICIVLNTLFMAMEHHPMQDEFTK 766
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
+FTGI+T E +K++A L+ + Y ++ WN D I++ ++ V + + L
Sbjct: 767 MLSIGNKVFTGIFTAEMVLKIIA----LDPYYYFQERWNIFDGIIVTISLVELCFSINLL 822
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR RV + K+ + L I+G + ++ NL V+ + +F +FA++G+Q
Sbjct: 823 RSLRLLRVFKLAKSWPTLNSLLKIIGNSVGAMGNLTLVLAIIVF---IFAVVGMQ 874
>gi|355568831|gb|EHH25112.1| hypothetical protein EGK_08874 [Macaca mulatta]
Length = 1834
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSLVRRGAIKGFGMGKMGMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWMKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDHVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|355767540|gb|EHH62629.1| hypothetical protein EGM_21028 [Macaca fascicularis]
Length = 1835
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSLVRRGAIKGFGMGKMGMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWMKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDHVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>gi|380028083|ref|XP_003697741.1| PREDICTED: sodium channel protein para-like [Apis florea]
Length = 2078
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/112 (92%), Positives = 109/112 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+SKGKDIFRFSATDA+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 212 TFVVISKGKDIFRFSATDAMWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 271
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
TPTIESTEVIFTGIYTFESAVKVMARGFIL+ FTYLRDAWNWLDF+VIALA
Sbjct: 272 TTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALA 323
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA-- 125
IFT I+ E +K +A GF Y +AW WLDFI++ ++ + L G + A
Sbjct: 1362 IFTVIFFIEMLIKWLALGFK----KYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFK 1417
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R LR L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1418 TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1476
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 21/176 (11%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-- 71
F D W+ F ++ ++ P LFI I+ N + M + + E +
Sbjct: 818 FCVWDCCWLWLEF---QKYVALLVFDPFVELFITLCIVVNTLFMALDHHDMDKDMERVLK 874
Query: 72 -----FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
FT + E+ +K++A + Y ++ WN DFI++AL+ + +G++ + L+
Sbjct: 875 TGNYFFTATFGIEATLKLIA----MSPKFYFQEGWNIFDFIIVALSLLELGLEGVQGLSV 930
Query: 126 LRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L +I+G + ++ NL V+ + +F +FA+MG+Q
Sbjct: 931 LRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGNLTFVLCIIIF---IFAVMGMQ 983
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN------ 122
+IF I+T E +K+ A + Y ++ WN DF+V+ L+ +G+ L +
Sbjct: 1676 NMIFIVIFTSECLMKIFAL-----RYHYFKEPWNLFDFVVVILS--ILGLVLSDIIEKYF 1728
Query: 123 -----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +R +V R L+ V G++T++ A+ S+ L ++ +L + +FA+ G+
Sbjct: 1729 VSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGM 1788
>gi|342837669|tpg|DAA34924.1| TPA_inf: voltage-dependent sodium channel SCN10A [Ornithorhynchus
anatinus]
Length = 1551
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 140/184 (76%), Gaps = 1/184 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ IFRFSAT+AL+VL PF+PIRRVA+ I VH FSLFI+ TIL NC+ M
Sbjct: 90 TFMVLNKGRTIFRFSATNALFVLSPFHPIRRVAVKISVHKYFSLFIMATILANCVFMTQA 149
Query: 61 GTP-TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES +K++ARGF L FTY+ D WN LDF +I LAY+ +D
Sbjct: 150 DPPPSAEYVWYTFTGIYTFESLIKILARGFCLNEFTYMWDMWNILDFCIIILAYLAEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
L ++ALRTFRV RALKTV+++PGLK IVGA+I SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 210 LKGVSALRTFRVFRALKTVSVIPGLKVIVGALIHSVKKLADVMVLTVFCLSVFALVGLQL 269
Query: 180 SRGK 183
+G
Sbjct: 270 FKGN 273
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R+ ++ H F FII IL + + + G T+++ +++FT I+ E
Sbjct: 1139 LRKTCFLMVEHSWFESFIIFMILLSSGTLAFEDIYLEGRQTVKAILDYADLLFTYIFILE 1198
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ DLG + +LRT R LR
Sbjct: 1199 MLLKWVAYGFQ----KYFTNAWCWLDFLIVDVSLISLVANALGHSDLGPIKSLRTLRALR 1254
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1255 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1304
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPT------IESTEVIFTGIYTFESAVKVMARGF 89
++ PL L + I+ N + M M T + ++FTGI+T E KV+A
Sbjct: 648 VVTDPLVELAVTACIVLNTLFMAMHYKMTETFKLLLHIGNLVFTGIFTAEMVFKVIA--- 704
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTIV 148
L+ + Y + +WN D I++ L+ + +G+ G+L+ LR+FR+LR K P L T++
Sbjct: 705 -LDPYYYFQTSWNIFDSIIVILSLMELGLPKKGSLSVLRSFRLLRVFKLAKSWPTLNTLI 763
Query: 149 GAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ SV L ++ ++ + +FA++G+Q
Sbjct: 764 KIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 793
>gi|440890855|gb|ELR44938.1| Sodium channel protein type 4 subunit alpha, partial [Bos grunniens
mutus]
Length = 2019
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 145/203 (71%), Gaps = 25/203 (12%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPL------------------- 41
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H
Sbjct: 92 TFIVLNKGKSIFRFSATPALYILSPFSIVRRCAIKVLIHSYPGGVGRAQGRGKAGRGQGW 151
Query: 42 -----FSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFT 95
+FI+ TILTNC+ M M P+ + E FTGIYTFES +K++ARGF ++ FT
Sbjct: 152 ARTGRSGMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARGFCIDDFT 211
Query: 96 YLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+LRD WNWLDF VI +AY+T +DLGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SV
Sbjct: 212 FLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSV 271
Query: 156 KNLRDVIILTMFSLSVFALMGLQ 178
K L DV+ILT+F LSVFAL+GLQ
Sbjct: 272 KKLSDVMILTVFCLSVFALVGLQ 294
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYT 77
P+ +++ I++ P L I I+ N + M M P E ++FTGI+T
Sbjct: 778 PWVKFKKIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDSVLNVGNLVFTGIFT 837
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 838 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 893
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 894 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 935
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1238 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFILE 1297
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1298 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1353
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1354 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1403
>gi|345319355|ref|XP_003430134.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 5
subunit alpha-like, partial [Ornithorhynchus anatinus]
Length = 1782
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 140/184 (76%), Gaps = 1/184 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ IFRFSAT+AL+VL PF+PIRRVA+ I VH FSLFI+ TIL NC+ M
Sbjct: 106 TFMVLNKGRTIFRFSATNALFVLSPFHPIRRVAVKISVHKYFSLFIMATILANCVFMTQA 165
Query: 61 GTP-TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES +K++ARGF L FTY+ D WN LDF +I LAY+ +D
Sbjct: 166 DPPPSAEYVWYTFTGIYTFESLIKILARGFCLNEFTYMWDMWNILDFCIIILAYLAEFVD 225
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
L ++ALRTFRV RALKTV+++PGLK IVGA+I SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 226 LKGVSALRTFRVFRALKTVSVIPGLKVIVGALIHSVKKLADVMVLTVFCLSVFALVGLQL 285
Query: 180 SRGK 183
+G
Sbjct: 286 FKGN 289
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R+ ++ H F FII IL + + + G T+++ +++FT I+ E
Sbjct: 1156 LRKTCFLMVEHSWFESFIIFMILLSSGTLAFEDIYLEGRQTVKAILDYADLLFTYIFILE 1215
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ DLG + +LRT R LR
Sbjct: 1216 MLLKWVAYGFQ----KYFTNAWCWLDFLIVDVSLISLVANALGHSDLGPIKSLRTLRALR 1271
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1272 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1321
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
++ PL L + I+ N + M M E+ ++FTGI+T E KV+A
Sbjct: 664 VVTDPLVELAVTACIVLNTLFMAMEHYKMTETFKLLLHIGNLVFTGIFTAEMVFKVIA-- 721
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
L+ + Y + +WN D I++ L+ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 722 --LDPYYYFQTSWNIFDSIIVILSLMELGLPKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 779
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ ++ + +FA++G+Q
Sbjct: 780 IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 810
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH 39
TF+V+++ K IFRFSAT AL+ L PF+P+RR AI +LVH
Sbjct: 1735 TFIVLNRAKTIFRFSATPALFALSPFHPLRRAAIKVLVH 1773
>gi|426339988|ref|XP_004033917.1| PREDICTED: sodium channel protein type 10 subunit alpha isoform 1
[Gorilla gorilla gorilla]
Length = 1959
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1144 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1204 MLLKWVAYGFR----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 664 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 721
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 722 --FDPYYYFQKKWNIFDCIIVTVSLLELGLAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 779
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 780 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 810
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 42/210 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1433 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLN 1492
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+++ F ++T E +K+ F L + Y + WN DF
Sbjct: 1493 MITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1547
Query: 107 IVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIES 154
IV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++ S
Sbjct: 1548 IVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1606
Query: 155 VKNLRDV---IILTMFSLSVFALMGLQDSR 181
+ L ++ + L MF S+F + R
Sbjct: 1607 LPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1636
>gi|426339990|ref|XP_004033918.1| PREDICTED: sodium channel protein type 10 subunit alpha isoform 2
[Gorilla gorilla gorilla]
Length = 1967
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1152 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1211
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1212 MLLKWVAYGFR----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1267
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1268 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1317
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 673 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 730
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 731 --FDPYYYFQKKWNIFDCIIVTVSLLELGLAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 788
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 789 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 819
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVI------FTGIYT 77
P N + I+ F + I+ I N I +M+ + E T+++ F ++T
Sbjct: 1472 PLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVETDDQSEEKTKILGKINQFFVAVFT 1531
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTF-------- 129
E +K+ F L + Y + WN DFIV+ L+ ++ I L +L+++
Sbjct: 1532 GECVMKM----FALRQY-YFTNGWNVFDFIVVVLSIASL-IFSAILKSLQSYFSPTLFRV 1585
Query: 130 ----RVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFALMGLQDSR 181
R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F + R
Sbjct: 1586 IRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1644
>gi|123913390|sp|Q2XVR5.2|SC4AA_TETNG RecName: Full=Sodium channel protein type 4 subunit alpha A;
AltName: Full=Voltage-gated sodium channel subunit alpha
Nav1.4a
gi|84310205|gb|ABB29443.2| voltage-gated sodium channel Nav1.4a [Tetraodon nigroviridis]
Length = 1863
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 142/179 (79%), Gaps = 5/179 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KG I+RF+A A ++L PF+ +RR AI IL+H L I+ TIL+NC+ M M
Sbjct: 86 TFVVITKGNTIYRFNAEPACYILSPFSRVRRGAIKILIHSL----IMITILSNCVFMTMS 141
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 142 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGPFTFLRDPWNWLDFMVISMAYITEFVD 201
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIV A+I+SVK + DV+ILT+F+LSVFAL+GLQ
Sbjct: 202 LGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKKMVDVMILTVFALSVFALVGLQ 260
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1039 LRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTVKIILEFADKVFTFIFVLE 1098
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ ++ MG+ DLG + +LRT R LR
Sbjct: 1099 MVLKWVAYGFK----TYFTNAWCWLDFFIVDISLISLSANLMGLSDLGPIKSLRTLRALR 1154
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1155 PLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1204
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ W P+ + ++++ P L I I+ N + M M P + +
Sbjct: 563 YKFANMFLKWNCCQPWAVFKEWVHFVVMDPFVDLAITICIVLNTLFMAMEHYPMTQEFDY 622
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y + WN D I++ L+ V +G+ ++
Sbjct: 623 MLSVGNLVFTGIFAAEMFFKLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQG 678
Query: 123 LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L I+G+ + ++ NL V+ + +F +FA++G+Q
Sbjct: 679 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGSSVGALGNLTLVLAIIVF---IFAVVGMQ 734
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP---GTPTIE----STEVIFTGIYT 77
P N I+ + + F +FI+ I N + M++ +P E V F ++T
Sbjct: 1358 PTNLIQGMVFDFISQQFFDIFIMVLICLNMVTMMVETDDQSPEKEDFLFKVNVAFIVVFT 1417
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN--------LAALRT 128
E +K++A L + + + WN DF+V+ L+ TM DL +R
Sbjct: 1418 GECMLKLIA----LRQY-FFTNGWNIFDFVVVILSIAGTMLSDLIEKYFVSPTLFRVIRL 1472
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1473 ARIGRILRLIKGARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1523
>gi|441610789|ref|XP_003256917.2| PREDICTED: sodium channel protein type 10 subunit alpha [Nomascus
leucogenys]
Length = 1959
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1144 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1204 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 664 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 721
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 722 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 779
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 780 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 810
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 40/210 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1432 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICL 1491
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1492 NMITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1546
Query: 106 FIVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIES 154
FIV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S
Sbjct: 1547 FIVVVLSIASLVFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1606
Query: 155 VKNLRDV---IILTMFSLSVFALMGLQDSR 181
+ L ++ + L MF S+F + R
Sbjct: 1607 LPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1636
>gi|402860593|ref|XP_003894710.1| PREDICTED: sodium channel protein type 10 subunit alpha [Papio
anubis]
Length = 1959
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALINSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1144 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGI----DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L +T I ++ + ALRT R LR
Sbjct: 1204 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESA 81
++ + ++ P L I I+ N I M M +PT E+ ++FT +T E
Sbjct: 657 LKTILFELVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMV 716
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
K++A + + YL+ WN D I++ ++ + +G+ G+L+ LR+FR+LR K
Sbjct: 717 FKIIA----FDPYYYLQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKS 772
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ I+ + VFAL+G Q
Sbjct: 773 WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 810
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 40/210 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1432 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICL 1491
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F I+T E +K+ F L + Y + WN D
Sbjct: 1492 NMITMMVETDDQSEEKTKILGKINQFFVAIFTGECVMKM----FALRQY-YFTNGWNVFD 1546
Query: 106 FIVIALAYVTMGI-----DLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIES 154
FIV+ L+ ++ L N + FRV+R L+ + G++T++ A++ S
Sbjct: 1547 FIVVVLSITSLVFSAILKSLQNYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1606
Query: 155 VKNLRDV---IILTMFSLSVFALMGLQDSR 181
+ L ++ + L MF S+F + R
Sbjct: 1607 LPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1636
>gi|326921484|ref|XP_003206989.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Meleagris gallopavo]
Length = 1956
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 141/188 (75%), Gaps = 6/188 (3%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG 61
F+V++K K IFRF+AT ALW+L PF+PIRR AI I +H LF+ FII TI+TNC+ M
Sbjct: 87 FIVINKQKTIFRFTATRALWILSPFHPIRRAAIKISIHSLFTWFIICTIITNCVFMARNE 146
Query: 62 TPTIES------TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ S E FTGIYTFES +K++ARGF L FT+LRD WNWLDF VI +A+V
Sbjct: 147 SSRSTSPSWNKYVEFTFTGIYTFESLIKILARGFCLNEFTFLRDPWNWLDFSVIVMAFVG 206
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+LG+++ LRTFRVLRALKT++++PGLK IVGA+I+SVK L +V+ILT+F LSVFAL+
Sbjct: 207 AFSNLGSVSVLRTFRVLRALKTISVLPGLKVIVGALIQSVKKLANVMILTVFCLSVFALI 266
Query: 176 GLQDSRGK 183
GLQ +G
Sbjct: 267 GLQLFKGN 274
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 85/168 (50%), Gaps = 17/168 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV---------IFTGIYTFE 79
+R+ I+ H F FII IL + + E + +FT ++ E
Sbjct: 1151 LRKTCYQIVEHSWFESFIIFMILLSSGALAFEDIHINERQTIKAVLLFLDRLFTFVFFLE 1210
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT----MGIDLGNLAALRTFRVLRAL 135
+K +A GF Y +AW WLDF+++ ++ ++ +G L + +LRT R LR L
Sbjct: 1211 MILKWVAYGFT----KYFTNAWCWLDFLIVGVSCISLINILGSSLDGVKSLRTLRALRPL 1266
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1267 RALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1314
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 13 RFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIF 72
R A ++ DPF + + + I+++ LF + N LM+ G IF
Sbjct: 708 RIKKKVAAFIKDPFIDLT-ITLCIVMNTLFMALEHNNMTHNFKLMLSVGNS-------IF 759
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL----------GN 122
TGI+T E +K++A L+ + Y + WN D I++ L+ + + + G
Sbjct: 760 TGIFTAEMVLKIIA----LDPYYYFQQPWNIFDSIIVTLSLIELSLPRYGSKKERRKGGT 815
Query: 123 LAALRTFRVLRALKTVAIVPGLKT---IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L LR+FR+LR K P L T I+G + ++ NL V+ +T+F +FA++G+Q
Sbjct: 816 LTVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSLGALSNLTLVLAITVF---IFAIVGVQ 871
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP-------GTPTIESTEVIFTGIYT 77
P N + I + F + I+ I N I M++ T + ++F I+T
Sbjct: 1467 PLNRYQGFLFDIATNQAFDIAIMILICLNMITMMVETYEQSDTKTNVLNKINILFVAIFT 1526
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GIDLGNLAALRTFRVL 132
E +K++A L + Y +AWN D +V+ ++ V + G + FRV+
Sbjct: 1527 TECILKLVA----LRQY-YFSNAWNIFDIVVVIMSIVALLLSGIGKAFEHFLPPTLFRVI 1581
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R L+ + G++T++ A++ S+ L ++ +L + ++A+ G+ +
Sbjct: 1582 RLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMAN 1634
>gi|397511554|ref|XP_003826136.1| PREDICTED: sodium channel protein type 10 subunit alpha [Pan
paniscus]
Length = 1959
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITITILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1144 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1204 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 664 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 721
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 722 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 779
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 780 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 810
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1432 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICL 1491
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1492 NMITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKL----FALRQY-YFTNGWNVFD 1546
Query: 106 FIVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIE 153
FIV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++
Sbjct: 1547 FIVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMM 1605
Query: 154 SVKNLRDV---IILTMFSLSVFALMGLQDSR 181
S+ L ++ + L MF S+F + R
Sbjct: 1606 SLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1636
>gi|410036707|ref|XP_516372.3| PREDICTED: sodium channel protein type 10 subunit alpha [Pan
troglodytes]
Length = 1959
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITITILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1144 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1204 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 664 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 721
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 722 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 779
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 780 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 810
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1432 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICL 1491
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1492 NMITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKL----FALRQY-YFTNGWNVFD 1546
Query: 106 FIVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIE 153
FIV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++
Sbjct: 1547 FIVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMM 1605
Query: 154 SVKNLRDV---IILTMFSLSVFALMGLQDSR 181
S+ L ++ + L MF S+F + R
Sbjct: 1606 SLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1636
>gi|297286124|ref|XP_002808374.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 10
subunit alpha-like [Macaca mulatta]
Length = 1969
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALINSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1154 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1213
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGI----DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF++ I+L +T I ++ + ALRT R LR
Sbjct: 1214 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLTAKILEYSEVAPIKALRTLRALR 1269
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1270 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1319
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 664 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 721
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 722 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 779
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 780 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 810
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVI------FTGIYT 77
P N + I+ F + I+ I N I +M+ + E T+++ F ++T
Sbjct: 1474 PLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVETDDQSEEKTKILGKINQFFVAVFT 1533
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-----DLGNLAALRTFRVL 132
E +K+ F L + Y + WN DFIV+ L+ ++ L N + FRV+
Sbjct: 1534 GECVMKM----FALRQY-YFTNGWNVFDFIVVVLSISSLVFSAILKSLQNYFSPTLFRVI 1588
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFALMGLQDSR 181
R L+ + G++T++ A++ S+ L ++ + L MF S+F + R
Sbjct: 1589 RLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1646
>gi|395843494|ref|XP_003794516.1| PREDICTED: sodium channel protein type 10 subunit alpha isoform 1
[Otolemur garnettii]
Length = 1958
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + +H PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKMSIHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E IFT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRNDLP--ERAEYIFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGSA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL +C L P + E T+ +FT I+ FE
Sbjct: 1142 MRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEIAPIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1307
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARG 88
++ P L I I+ N + M M ++ ++FT +T E K++A
Sbjct: 666 LVTDPFAELTITLCIVVNTLFMAMEHHRMSAAFEAMLQIGNIVFTIFFTAEMVFKIIA-- 723
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LRTFR+LR K P L T+
Sbjct: 724 --FDPYYYFQKKWNIFDCIIVTVSLLELGMAKKGSLSVLRTFRLLRVFKLAKSWPTLNTL 781
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G+Q
Sbjct: 782 IKIIGNSVGALGNLTIILGIIVFVFALVGMQ 812
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 40/212 (18%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R + Y I+ F + I+ I
Sbjct: 1430 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDIVTRQAFDIIIMVLICL 1489
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+V+ F ++T E +K+ F L + Y + WN D
Sbjct: 1490 NMITMMVETDEQSEEKTKVLGKINQFFVAVFTGECVMKM----FALRHY-YFTNGWNVFD 1544
Query: 106 FIVIALAYVTMGI-----DLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIES 154
FIV+ L+ ++ L N + FRV R L+ + G++T++ A++ S
Sbjct: 1545 FIVVVLSIASLVFSAILKSLENYFSPTLFRVFRLARIGRILRLIRAAKGIRTLLFALMMS 1604
Query: 155 VKNLRDV---IILTMFSLSVFALMGLQDSRGK 183
+ L ++ + L MF S+F + R +
Sbjct: 1605 LPALFNIGLLLFLVMFIYSIFGMSSFPHVRQE 1636
>gi|395843496|ref|XP_003794517.1| PREDICTED: sodium channel protein type 10 subunit alpha isoform 2
[Otolemur garnettii]
Length = 1967
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + +H PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKMSIHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E IFT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TRNDLP--ERAEYIFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGSA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL +C L P + E T+ +FT I+ FE
Sbjct: 1151 MRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYTDRVFTFIFVFE 1210
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1211 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEIAPIKALRTLRALR 1266
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1267 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1316
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARG 88
++ P L I I+ N + M M ++ ++FT +T E K++A
Sbjct: 676 LVTDPFAELTITLCIVVNTLFMAMEHHRMSAAFEAMLQIGNIVFTIFFTAEMVFKIIA-- 733
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LRTFR+LR K P L T+
Sbjct: 734 --FDPYYYFQKKWNIFDCIIVTVSLLELGMAKKGSLSVLRTFRLLRVFKLAKSWPTLNTL 791
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G+Q
Sbjct: 792 IKIIGNSVGALGNLTIILGIIVFVFALVGMQ 822
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + Y I+ F + I+ I N
Sbjct: 1440 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDIVTRQAFDIIIMVLICLN 1499
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1500 MITMMVETDEQSEEKTKVLGKINQFFVAVFTGECVMKM----FALRHY-YFTNGWNVFDF 1554
Query: 107 IVIALAYVTMGI-----DLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ L+ ++ L N + FRV R L+ + G++T++ A++ S+
Sbjct: 1555 IVVVLSIASLVFSAILKSLENYFSPTLFRVFRLARIGRILRLIRAAKGIRTLLFALMMSL 1614
Query: 156 KNLRDV---IILTMFSLSVFALMGLQDSRGK 183
L ++ + L MF S+F + R +
Sbjct: 1615 PALFNIGLLLFLVMFIYSIFGMSSFPHVRQE 1645
>gi|348519861|ref|XP_003447448.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oreochromis niloticus]
Length = 1975
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+A+ AL++L FNP+RR++I ILVH LF++ I+ TILTNC M +
Sbjct: 89 TFIVLNKGKVIFRFNASPALYLLSAFNPLRRLSIRILVHSLFNMVIMCTILTNCAFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
+P ++ E FT IYTFE VK++ARGF + FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 ESPVWAKNVEYTFTAIYTFEFLVKILARGFCIGKFTFLRDPWNWLDFSVIVMAYVTEFVP 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ LRTFRVLRA K ++++PGLKTIV A+ +SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSVLRTFRVLRAFKAISVIPGLKTIVAALFQSVKKLADVMILTVFCLSVFALIGLQ 267
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+ F+ T +W P + ++++ I++ P LFI I N + M M P + +
Sbjct: 710 YDFAHTFLIWECCPGWLKLKKIVKLIVMDPFMDLFITICIALNTLFMAMEHYPMSDGFQN 769
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGN 122
IFTGI+T E KV+A L+ + Y ++ WN D I+++L+ + + ++ L N
Sbjct: 770 MLAVGNKIFTGIFTAEMVFKVIA----LDPYYYFQERWNIFDGIIVSLSLIELCLESLKN 825
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 826 MSVLRSFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 881
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1170 LRKTCYRIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKIFTYIFILE 1229
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1230 MLLKWVAYGFA----KYFTNAWCWLDFLIVDVSLVSLVANALGANELGAIKSLRTLRALR 1285
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1286 PLRALSRFEGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1335
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 35/203 (17%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRRVAIYIL-------VHPLFSLFIITTILT 52
+G+DIF ++A L P PI R + IL F + I+ I
Sbjct: 1453 RGQDIFMTEEQRKYYNAMKKLASKKPQKPIPRPSNKILGYIFDFTTKQSFDIVIMVLISL 1512
Query: 53 NCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I M++ E + V+F GI+T E +K+++ L + ++ + WN D
Sbjct: 1513 NMIAMMLETDEQSEYKKNVLHIINVVFVGIFTGECLLKMVS----LRHYFFM-NGWNIFD 1567
Query: 106 FIVIALA----YVTMGIDLGNLAA-----LRTFRVLRALKTVAIVPGLKTIVGAVIESVK 156
FIV+ L+ ++T I+ L+ +R R+ R L+ + ++T++ A++ S+
Sbjct: 1568 FIVVILSIIGLFLTEIIEKYFLSPTLFRVIRLARIGRILRLIKSAKRIRTLLFALMMSLP 1627
Query: 157 NLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A++G+ +
Sbjct: 1628 ALFNIGLLLFLVMFIYAIIGMSN 1650
>gi|297488437|ref|XP_002696962.1| PREDICTED: sodium channel protein type 10 subunit alpha [Bos
taurus]
gi|296475121|tpg|DAA17236.1| TPA: tetrodotoxin-resistant voltage-gated sodium channel-like [Bos
taurus]
Length = 1973
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFNPIRR+AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNPIRRIAIKVSVHSYPLWFSLFITITILVNCVGM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAY
Sbjct: 151 TRTELP--ERMEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYAGEV 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
DL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 TDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTVFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + ++ + PT+ E T+ +FT I+ FE
Sbjct: 1143 VRKACFRIVEHSWFESFIVFMILLSSGALVFEDVYLDQKPTVKALLEYTDRVFTFIFVFE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIA------LAYVTMGIDLGNLAALRTFRVLR 133
+K +A GF +Y +AW WLDF+++ +A + D+ ++ ALRT R LR
Sbjct: 1203 MLLKWVAYGFK----SYFTNAWCWLDFLIVNISLTSLIAKILQYSDMASIKALRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGK 1308
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
I+ P L I I+ N + M M +P E+ ++FT +T E K++A
Sbjct: 663 IVTDPFAELTITLCIVVNTVFMAMEHYGMSPAFEAMLQIGNIVFTMFFTAEMVFKIIA-- 720
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
L+ + Y + WN D I++ ++ + +G G+L LRTFR+LR K P L T+
Sbjct: 721 --LDPYYYFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFRLLRVFKLAKSWPTLNTL 778
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + +FAL+G Q
Sbjct: 779 IKIIGNSVGALGNLTIILAIIVFIFALVGKQ 809
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1432 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLN 1491
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1492 MITMMVETDEQSEEKTKVLNKINQFFVAVFTGECVMKM----FALRHY-YFTNGWNVFDF 1546
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
+V+ +L + + LG+L + FRV+R L+ + G++T++ A++ S+
Sbjct: 1547 VVVVLSIGSLVFSAIVSSLGSLFSPTLFRVIRLARVGRILRLIRGAKGIRTLLFALMMSL 1606
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1607 PALFNIGLLLFLVMFIYSIFGMAN 1630
>gi|354487655|ref|XP_003505987.1| PREDICTED: sodium channel protein type 10 subunit alpha-like
[Cricetulus griseus]
Length = 2013
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILFNCVCMTQS 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 ELP--ERIEYAFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + P ++S T+ +FT I+ FE
Sbjct: 1197 LRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLDKKPRVKSMLEYTDRVFTFIFVFE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ +L ALRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILKYSDVASLKALRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAV 82
+ V ++ P L I I+ N + M M P E+ ++FT +T E A
Sbjct: 656 KMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTEAFDAMLQAGNIVFTVFFTMEMAF 715
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIV 141
K++A + + Y + WN D +++ ++ + + I G+L+ LRTFR+LR K
Sbjct: 716 KIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSISKKGSLSVLRTFRLLRVFKLAKSW 771
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ---DSRGKKSD 186
P L T++ + SV L ++ + + +FAL+G Q D G + D
Sbjct: 772 PTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQLLGDDYGCRKD 819
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1485 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIAIMVLICL 1544
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1545 NMITMMVETDDQSEEKTKILGRINMFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1599
Query: 106 FIVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIES 154
FIV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S
Sbjct: 1600 FIVVILSIGSLVFSAILKSLESYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1659
Query: 155 VKNLRDV---IILTMFSLSVFAL 174
+ L ++ + L MF S+F +
Sbjct: 1660 LPALFNIGLLLFLVMFIYSIFGM 1682
>gi|410895123|ref|XP_003961049.1| PREDICTED: sodium channel protein type 4 subunit alpha A-like
[Takifugu rubripes]
Length = 1888
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 142/179 (79%), Gaps = 5/179 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVV+KG I+RF+A A ++L PF+ +RR AI IL+H L I+ TIL+NC+ M M
Sbjct: 86 TFVVVTKGNTIYRFNAEPACYILSPFSLVRRGAIKILIHSL----IMITILSNCVFMTMS 141
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 142 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGPFTFLRDPWNWLDFMVISMAYITEFVD 201
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIV A+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 202 LGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKKMVDVMILTVFALAVFALVGLQ 260
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1055 LRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTVKIVLEFADKVFTFIFVIE 1114
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ ++ MG DLG + +LRT R LR
Sbjct: 1115 MLLKWVAYGFK----TYFTNAWCWLDFFIVDISLISLSANLMGFSDLGPIKSLRTLRALR 1170
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1171 PLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1220
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMAR 87
++++ P L I I+ N + M M P E + ++FTGI+ E K++A
Sbjct: 603 FVVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFDYMLSVGNLVFTGIFAAEMFFKLIA- 661
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKT 146
++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K P L
Sbjct: 662 ---MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM 718
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + SV L ++ ++ + +FA++G+Q
Sbjct: 719 LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 750
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 9 KDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTNC 54
KDIF + A L P PI R A I + F +FI+ I N
Sbjct: 1344 KDIFMTEEQKKYYEAMKKLGSKKPQKPIPRPANLIQGLVFDFISQQFFDIFIMVLICLNM 1403
Query: 55 ILMIMP---GTPTIE----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFI 107
+ M++ +P E V F ++T E +K+ F L + + + WN DFI
Sbjct: 1404 VTMMVETDDQSPAKEDFLFKVNVAFIVVFTGECTLKL----FALRHY-FFTNGWNIFDFI 1458
Query: 108 VIALAYV-TMGIDLGN--------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNL 158
V+ L+ TM D+ +R R+ R L+ + G++T++ A++ S+ L
Sbjct: 1459 VVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGARGIRTLLFALMMSLPAL 1518
Query: 159 RDVIILTMFSLSVFALMGLQD 179
++ +L + +F++ G+ +
Sbjct: 1519 FNIGLLLFLIMFIFSIFGMSN 1539
>gi|6815119|dbj|BAA90398.1| voltage-gated sodium channel [Takifugu pardalis]
Length = 1880
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 142/179 (79%), Gaps = 5/179 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVV+KG I+RF+A A ++L PF+ +RR AI IL+H L I+ TIL+NC+ M M
Sbjct: 86 TFVVVTKGNTIYRFNAEPACYILSPFSLVRRGAIKILIHSL----IMITILSNCVFMTMS 141
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 142 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGPFTFLRDPWNWLDFMVISMAYITEFVD 201
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIV A+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 202 LGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKKMVDVMILTVFALAVFALVGLQ 260
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1047 LRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTVKIVLEFADKVFTFIFVIE 1106
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ ++ MG DLG + +LRT R LR
Sbjct: 1107 MLLKWVAYGFK----TYFTNAWCWLDFFIVDISLISLSANLMGFSDLGPIKSLRTLRALR 1162
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1163 PLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1212
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMAR 87
++++ P L I I+ N + M M P E + ++FTGI+ E K++A
Sbjct: 595 FVVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFDYMLSVGNLVFTGIFAAEMFFKLIA- 653
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKT 146
++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K P L
Sbjct: 654 ---MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM 710
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + SV L ++ ++ + +FA++G+Q
Sbjct: 711 LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 742
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 35/201 (17%)
Query: 9 KDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTNC 54
KDIF + A L P PI R A I + F +FI+ I N
Sbjct: 1336 KDIFMTEEQKKYYEAMKKLGSKKPQKPIPRPANLIQGLVFDFISQQFFDIFIMVLICLNM 1395
Query: 55 ILMIMP---GTPTIE----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFI 107
+ M++ +P E V F ++T E +K++A L + + + WN DFI
Sbjct: 1396 VTMMVETDDQSPAKEDFLFKVNVAFIVVFTGECTLKLIA----LRHY-FFTNGWNIFDFI 1450
Query: 108 VIALAYV-TMGIDLGN--------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNL 158
V+ L+ TM D+ +R R+ R L+ + G++T++ A++ S+ L
Sbjct: 1451 VVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGARGIRTLLFALMMSLPAL 1510
Query: 159 RDVIILTMFSLSVFALMGLQD 179
++ +L + +F++ G+ +
Sbjct: 1511 FNIGLLLFLIMFIFSIFGMSN 1531
>gi|348556761|ref|XP_003464189.1| PREDICTED: sodium channel protein type 10 subunit alpha-like [Cavia
porcellus]
Length = 1944
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 133/183 (72%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH F+LFI TI+ NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFTLFITLTIVANCVCMTRS 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV DL
Sbjct: 151 DLP--EKIEYLFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTATDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 KGFSGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL +C L P + E T+ +FT I+ FE
Sbjct: 1135 LRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYTDRVFTFIFVFE 1194
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ D+ ++ ALRT R LR
Sbjct: 1195 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLVSLTAKILEYSDVESIKALRTLRALR 1250
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1251 PLRALSRFEGMRVVVDALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1300
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESA 81
++ V ++ P L I I+ N I M M + ES ++FT +T E
Sbjct: 654 LKEVLFKLVTDPFAELTITLCIVVNTIFMAMEHHGMSSAFESMLQIGNIVFTIFFTAEMV 713
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG-IDLGNLAALRTFRVLRALKTVAI 140
K++A + + Y + WN D +++ ++ + + + G+L+ LRTFR+LR K
Sbjct: 714 FKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSMVKKGSLSVLRTFRLLRVFKLAKS 769
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ I+ + +FAL+G Q
Sbjct: 770 WPTLNTLIKIIGNSVGALGNLTIILAIIVFIFALVGKQ 807
>gi|395733981|ref|XP_002813965.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 10
subunit alpha [Pongo abelii]
Length = 1959
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 136/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVCM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L F YLRD WNWLDF VI LAYV
Sbjct: 151 TRTDLP--EKIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWNWLDFSVITLAYVGTA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1144 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1203
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1204 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1259
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1260 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1309
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 664 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 721
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 722 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 779
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 780 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 810
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1432 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICL 1491
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1492 NMITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1546
Query: 106 FIVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIE 153
FIV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++
Sbjct: 1547 FIVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMM 1605
Query: 154 SVKNLRDV---IILTMFSLSVFALMGLQDSR 181
S+ L ++ + L MF S+F + R
Sbjct: 1606 SLPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1636
>gi|350591072|ref|XP_003358419.2| PREDICTED: sodium channel protein type 10 subunit alpha-like
isoform 2, partial [Sus scrofa]
Length = 1177
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 137/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITITILVNCVGM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV
Sbjct: 151 TQSELP--ERIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGEA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIES----TEVIFTGIYTFESA 81
++++ I+ P L I I+ N I M M +PT E+ ++FT +T E
Sbjct: 664 LKKLLWSIVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTVFFTAEMV 723
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
K++A + + Y ++ WN D I++ ++ + +G+ G+L LRTFR+LR K
Sbjct: 724 FKIIA----FDPYYYFQNRWNIFDCIIVTVSLIELGMARKGSLTVLRTFRLLRVFKLAKS 779
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ I+ + VFAL+G Q
Sbjct: 780 WPTLNMLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 817
>gi|185133421|ref|NP_001118204.1| sodium channel protein type 4 subunit alpha A [Oncorhynchus mykiss]
gi|145933716|gb|ABP98938.1| voltage-gated sodium channel alpha type IV [Oncorhynchus mykiss]
Length = 1903
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K IFRF+A A ++L PF+ +RR +I IL+H LFS+FI+ T++ NC M +
Sbjct: 91 TFIVITKRNTIFRFNAEPACYILTPFSILRRGSIKILMHSLFSMFIMLTVVFNCAFMTIS 150
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ +KV++ GF + FTY RD WNWLDF+VI++AY+T +D
Sbjct: 151 DPPASSKTVEYVFTGIYTFEATIKVLSSGFCVGDFTYFRDPWNWLDFMVISMAYLTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F L+VFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLAVFALVGLQ 269
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIEST----EVIFTGIYT 77
P+ ++ +I++ P L I I+ N + M M P TP E ++FTGI+T
Sbjct: 615 PWVTFKKWMYFIVMDPFVDLGITICIVLNTMFMAMEHYPMTPEFEEVLSVGNLVFTGIFT 674
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ ++ V +G+ ++ L+ LR+FR++R K
Sbjct: 675 AEMVLKLIA----MDPYYYFQVGWNIFDSIIVTMSLVELGLANVEGLSVLRSFRLMRVFK 730
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 731 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 772
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 88/169 (52%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFES 80
R+ I+ H F FII IL + I + T I E + +FT ++ E
Sbjct: 1070 RKTCFLIVEHNYFETFIIFMILMSSGALAFEDIYIEQRRTIKIILEYADQVFTYVFIIEM 1129
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1130 LLKWVAYGFQ----AYFTNAWCWLDFLIVDVSLISLTANILGYAELGPIKSLRTLRALRP 1185
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1186 LRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNMFAGK 1234
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
GKDIF ++A L P PI R + ++ F +FI+ I N
Sbjct: 1357 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKFAGLIFDLITQQFFDIFIMVLICLN 1416
Query: 54 CILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + E ++F ++T E +K++ L + + WN DF
Sbjct: 1417 MVTMMVETDGQSKEKEDILFLINLVFIIVFTTECILKLIG----LRQY-FFSVGWNIFDF 1471
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1472 VVVILSIV--GLLLADLIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1529
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + +F++ G+ +
Sbjct: 1530 PALFNIGLLLFLIMFIFSIFGMSN 1553
>gi|363729897|ref|XP_418534.3| PREDICTED: sodium channel protein type 5 subunit alpha [Gallus
gallus]
Length = 1957
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 141/188 (75%), Gaps = 6/188 (3%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG 61
F+V++K K IFRF+AT ALW+L PF+PIRR AI I +H LF+ FII TI+TNC+ M
Sbjct: 87 FIVLNKQKTIFRFTATRALWILSPFHPIRRAAIKISIHSLFTWFIICTIITNCVFMAQNE 146
Query: 62 TPTIEST------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ S E FTGIYTFES +K++ARGF L FT+LRD WNWLDF VI +A+V
Sbjct: 147 SSRSSSPSWNRYVEFTFTGIYTFESLIKILARGFCLNEFTFLRDPWNWLDFSVIIMAFVG 206
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+LG+++ LRTFRVLRALKT+++VPGLK IVGA+I+SVK L +V+ILT+F LSVFAL+
Sbjct: 207 AFSNLGSVSVLRTFRVLRALKTISVVPGLKIIVGALIQSVKKLANVMILTVFCLSVFALI 266
Query: 176 GLQDSRGK 183
GLQ +G
Sbjct: 267 GLQLFKGN 274
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV---------IFTGIYTFE 79
+R+ I+ H F FI+ IL + ++ E + +FT ++ E
Sbjct: 1152 LRKTCYQIVEHSWFESFIVFMILLSSGVLAFEDIHINERRTIKAILSFLDRLFTFVFFLE 1211
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT----MGIDLGNLAALRTFRVLRAL 135
+K +A GF Y +AW WLDF+++ ++ V+ +G L + +LRT R LR L
Sbjct: 1212 MILKWVAYGFN----KYFTNAWCWLDFLIVGVSCVSLINILGSSLDGVKSLRTLRALRPL 1267
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1268 RALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1315
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAV 82
++VA +I P L I I+ N + M + E+ +IFTGI+T E +
Sbjct: 712 KKVAAFI-KDPFIDLTITLCIVMNTLFMALEHNNMTENFKLMLKVGNLIFTGIFTAEMVL 770
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL----------GNLAALRTFRVL 132
K++A L+ + Y + WN D I++ L+ + + + G L+ LR+FR+L
Sbjct: 771 KIIA----LDPYYYFQQPWNIFDSIIVTLSLIELSLPRQRGKKERRKGGTLSVLRSFRLL 826
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R K P L T++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 827 RVFKLAKSWPTLNTLIKIIGNSLGALSNLTLVLAIIVFIFAIVGVQ 872
>gi|56748617|sp|Q62968.1|SCNAA_RAT RecName: Full=Sodium channel protein type 10 subunit alpha;
AltName: Full=Peripheral nerve sodium channel 3;
Short=PN3; AltName: Full=Sensory neuron sodium channel;
AltName: Full=Sodium channel protein type X subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.8
gi|1280043|gb|AAC52619.1| sodium channel PN3 [Rattus norvegicus]
gi|1589144|prf||2210320A Na channel:SUBUNIT=alpha
Length = 1956
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITITILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKVEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1307
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYTFESAV 82
++A++ LV P L I I+ N + M M P +++ ++FT +T E A
Sbjct: 654 KMALFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIVFTVFFTMEMAF 713
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIV 141
K++A + + Y + WN D +++ ++ + + G+L+ LRTFR+LR K
Sbjct: 714 KIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTFRLLRVFKLAKSW 769
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ + + +FAL+G Q
Sbjct: 770 PTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1431 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICLN 1490
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1491 MITMMVETDEQGEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1545
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ +L + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1546 IVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1605
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1606 PALFNIGLLLFLVMFIYSIFGM 1627
>gi|47210106|emb|CAF93432.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1469
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 142/182 (78%), Gaps = 4/182 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP---LFSLFIITTILTNCILM 57
TF+V+SKG I RF+A +L++L PFN +R AI ILVH LFSLFI+ TILTNC+ M
Sbjct: 40 TFIVLSKGNVIHRFNAESSLYLLSPFNSMRIFAIKILVHSYKTLFSLFIMATILTNCVFM 99
Query: 58 IMPGTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
+ P T E +FT IYTFE+ +KV++RGF + FT+L+D WNWLDF+VI++AY+T
Sbjct: 100 TLSDPPAWSKTVEYVFTFIYTFEATIKVVSRGFCVGQFTFLKDPWNWLDFMVISMAYLTE 159
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
+DLGN++ LRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L D ++LT+F LSVFAL+G
Sbjct: 160 LVDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADAMVLTVFCLSVFALIG 219
Query: 177 LQ 178
LQ
Sbjct: 220 LQ 221
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 77/140 (55%), Gaps = 17/140 (12%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------ 118
+E + +FT ++ E +K A GF +Y +AW WLDF+++ ++ V++
Sbjct: 743 LEYADKVFTYVFVVEMVLKWFAYGFK----SYFSNAWCWLDFLIVDVSLVSLTANILGYS 798
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LG + +LRT R LR L+ ++ G++ +V A++ +V ++ +V+++ + +F++MG+
Sbjct: 799 ELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVN 858
Query: 179 DSRGK-------KSDESHDK 191
GK S E DK
Sbjct: 859 LFAGKFSYCFNETSQEQFDK 878
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++R I++ P L I I+ N I M M P E ++FTGI+T E
Sbjct: 414 LKRCLSAIVMDPFVDLGITICIILNTIFMAMEHYPMSADFEELLSVGNLVFTGIFTCEMV 473
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+K++A ++ + Y + WN D I++ ++ V +G+ ++ L+ LR+FR++R K
Sbjct: 474 LKILA----MDPYFYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKS 529
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 530 WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 567
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N ++ + ++ +F +FI+ I N + M++ + E VIF I+T
Sbjct: 1018 PENALQGLVFDLVTKQIFDVFIMVLICLNMVTMMVETDEQTKEKEDILYWINVIFIVIFT 1077
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNL-----------AA 125
E +K +A Y WN DF+V+ L+ + + G+ L ++
Sbjct: 1078 TECILKTIAL-----RRHYFSIGWNVFDFVVVILSILGVSGLLLADIIEKYFVSPTLFRV 1132
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1133 IRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1186
>gi|8394242|ref|NP_058943.1| sodium channel protein type 10 subunit alpha [Rattus norvegicus]
gi|1209467|emb|CAA63095.1| volatage-gated sodium channel [Rattus norvegicus]
Length = 1957
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITITILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKVEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1143 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1203 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1308
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYTFESAV 82
++A++ LV P L I I+ N + M M P +++ ++FT +T E A
Sbjct: 655 KMALFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIVFTVFFTMEMAF 714
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIV 141
K++A + + Y + WN D +++ ++ + + G+L+ LRT R+LR K
Sbjct: 715 KIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTLRLLRVFKLAKSW 770
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ + + +FAL+G Q
Sbjct: 771 PTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 807
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1432 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICLN 1491
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1492 MITMMVETDEQGEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1546
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ +L + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1547 IVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1606
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1607 PALFNIGLLLFLVMFIYSIFGM 1628
>gi|149018260|gb|EDL76901.1| rCG25223 [Rattus norvegicus]
Length = 1807
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITITILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKVEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 19/172 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 993 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1052
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1053 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1108
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK S
Sbjct: 1109 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1160
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPT-------I 65
F+ +W P ++A++ LV P L I I+ N + M M P +
Sbjct: 637 FAQKYLIWECCPKWRKFKMALFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAML 696
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLA 124
++ ++FT +T E A K++A + + Y + WN D +++ ++ + + G+L+
Sbjct: 697 QAGNIVFTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKGSLS 752
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFR+LR K P L T++ + SV L ++ + + +FAL+G Q
Sbjct: 753 VLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1281 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICL 1340
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ E T+V+ F ++T E +K+ F L + Y + WN D
Sbjct: 1341 NMITMMVETDEQGEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1395
Query: 106 FIVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIES 154
FIV+ +L + + L N + FRV+R L+ + G++T++ A++ S
Sbjct: 1396 FIVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1455
Query: 155 VKNLRDV---IILTMFSLSVFAL 174
+ L ++ + L MF S+F +
Sbjct: 1456 LPALFNIGLLLFLVMFIYSIFGM 1478
>gi|1586352|prf||2203418A voltage-gated Na channel
Length = 2007
Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITITILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKVEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1143 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1203 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1308
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYTFESAV 82
++A++ LV P L I I+ N + M M P +++ ++FT +T E A
Sbjct: 655 KMALFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIVFTVFFTMEMAF 714
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIV 141
K++A + + Y + WN D +++ ++ + + G+L+ LRT R+LR K
Sbjct: 715 KIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTLRLLRVFKLAKSW 770
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ + + +FAL+G Q
Sbjct: 771 PTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 807
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1432 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICLN 1491
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1492 MITMMVETDEQGEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1546
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ +L + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1547 IVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1606
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1607 PALFNIGLLLFLVMFIYSIFGM 1628
>gi|348519865|ref|XP_003447450.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Oreochromis niloticus]
Length = 1796
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+A+ AL++L FNPIRR++I ILVH LFS+ I+ TILTNC M M
Sbjct: 92 TFIVLNKGKVIFRFNASPALYLLSAFNPIRRLSIRILVHSLFSMAIMCTILTNCAFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
+P + E FT IYTFE VK++ARGF + FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 ESPVWAKKVEYTFTAIYTFEFLVKILARGFCIGKFTFLRDPWNWLDFSVIVMAYVTDLLD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ LRTFRVLRA K ++++PG+K I+ A+ +SVK L DV+ LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSVLRTFRVLRAFKALSVIPGIKAIISALFQSVKKLTDVMSLTIFCLSVFALIGLQ 270
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIES 67
+ F+ T +W P + +++ I++ P LFI I N + M M TP ++
Sbjct: 590 YDFAYTFLIWEWCPGWLKFKKIIHLIVMDPFMDLFITICIALNTLFMAMEHYQMTPNFQN 649
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGN 122
IFTGI+T E KV+A L+ F Y + WN D I+++L+ + + ++ + N
Sbjct: 650 MLNIGNKIFTGIFTAEMVFKVIA----LDPFYYFQKKWNIFDAIIVSLSLIELCLEKMKN 705
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q G
Sbjct: 706 MTILRSFRLLRVFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFG 764
Query: 183 KKSDESHDK 191
KK E+ K
Sbjct: 765 KKYKENVHK 773
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1042 LRKTCYQIVEHNWFESFIIFMILLSSGALAFEDIYNEQRKTIKTVLEFADKIFTCIFILE 1101
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K MA GF Y +AW WLDF++ ++ + + G + +LRT R LR
Sbjct: 1102 MLLKWMAYGFA----KYFSNAWCWLDFLIANISLADLIANALNANNFGPMKSLRTLRALR 1157
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V +++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1158 PLRALSRFEGIRVVVNSLMAAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1207
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 35/203 (17%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRRVAIYIL-------VHPLFSLFIITTILT 52
+G+DIF ++A L P PI R + IL F + I+ I
Sbjct: 1325 RGQDIFMTEEQRKYYNAMKKLASKKPQKPIPRPSNKILGYIFDFTTKQSFDIVIMVLISL 1384
Query: 53 NCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I M++ E + V+F GI+T E +K+++ L + ++ + WN D
Sbjct: 1385 NMIAMMLETDEQSEYKKNVLHIINVVFVGIFTGECLLKMVS----LRHYFFM-NGWNIFD 1439
Query: 106 FIVIALA----YVTMGIDLGNLAA-----LRTFRVLRALKTVAIVPGLKTIVGAVIESVK 156
FIV+ L+ ++T I+ L+ +R R+ R L+ + ++T++ A++ S+
Sbjct: 1440 FIVVILSIIGLFLTEIIEKYFLSPTLFRVIRLARIGRILRLIKSAKRIRTLLFALMMSLP 1499
Query: 157 NLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A++G+ +
Sbjct: 1500 ALFNIGLLLFLVMFIYAIIGMSN 1522
>gi|410897034|ref|XP_003962004.1| PREDICTED: sodium channel protein type 2 subunit alpha-like
[Takifugu rubripes]
Length = 1950
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 137/179 (76%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG IFRF+A AL++L PFN +RR++I ILVH LFS+ I+ TI+ NC M +
Sbjct: 89 TFIVLNKGSYIFRFNAAPALYLLSPFNLLRRISIRILVHSLFSVVIMCTIIANCGFMTLD 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FT IYTFES VK++ARGF L FT+LRD WNWLDF VI +AYVT ++
Sbjct: 149 RPPEWAKNVEYTFTAIYTFESLVKILARGFCLGKFTFLRDPWNWLDFSVIVMAYVTEFVN 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN + LRTFRVLRA K ++++PGLKTIV A+ +SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNFSVLRTFRVLRAFKAISVIPGLKTIVSALFQSVKKLADVMILTVFCLSVFALIGLQ 267
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTN-----CILMIMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + C + T+ E + IFT I+ E
Sbjct: 1154 LRKTCYRIVEHSWFESFIIFMILLSSGALACEDINSEKRKTVKILLEFADKIFTYIFILE 1213
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1214 MLLKWVAYGFA----KYFTNAWCWLDFLIVDVSLISLVANALGYSELGAIKSLRTLRALR 1269
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1270 PLRALSRFEGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1319
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+ F+ T +W P + ++V I++ P L I I+ N + M M P S
Sbjct: 691 YTFAETVLIWECCPVWMKFKKVVNLIVMDPFADLTITICIVLNTLFMAMEHYPMSGSFSR 750
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V+FT I+T E +K++A L+ + Y + WN D I++ L+ + + + ++
Sbjct: 751 MLTVGNVVFTCIFTAEMVLKIIA----LDPYYYFQTGWNIFDGIIVTLSLMELFLANVVG 806
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 807 MSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIVVFIFAVVGMQ 862
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR----VAIYIL---VHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + YI F + I+ I N
Sbjct: 1441 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKIQGYIFDFTTKQAFDIVIMVLIWLN 1500
Query: 54 CILMIMPGTPTIE-------STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ E + V+F I+T E +K+++ L + + + WN DF
Sbjct: 1501 MVTMMVETADQSEEMGRILYNINVVFIVIFTGECLLKMIS----LRHY-FFTNGWNIFDF 1555
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
IV+ L+ + G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1556 IVVILSII--GVFLSELIENYFVSPTLFRVIRLARIGRVLRLIKSAKGIRTLLFALMMSL 1613
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1614 PALFNIGLLLFLVMFIYAIFGMSN 1637
>gi|410971690|ref|XP_003992298.1| PREDICTED: sodium channel protein type 10 subunit alpha [Felis
catus]
Length = 1976
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 136/186 (73%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVGM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L F YLRD WNWLDF VI LAY+
Sbjct: 151 TQTELP--ERIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWNWLDFSVITLAYIGEA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
IDL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 IDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTVFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1160 VRKACYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1219
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIA------LAYVTMGIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ +A + D+ ++ ALRT R LR
Sbjct: 1220 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILQYSDVASIKALRTLRALR 1275
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1276 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGK 1325
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
I+ P L I I+ N + M M +P E+ ++FT +T E K++A
Sbjct: 673 IVTDPFAELTITLCIVVNTVFMAMEHHRMSPAFEAMLQIGNIVFTVFFTAEMVFKIIA-- 730
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G G+L+ LRTFR+LR K P L T+
Sbjct: 731 --FDPYYYFQKRWNIFDCIIVTVSLIELGAAKKGSLSVLRTFRLLRVFKLAKSWPTLNTL 788
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+ + SV L ++ I+ + VFAL+G Q D H+
Sbjct: 789 IKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRHN 831
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 40/209 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R ++ F + I+ I N
Sbjct: 1449 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDVVTRQAFDIIIMVLICLN 1508
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+++ F ++T E +KV F L + Y + WN DF
Sbjct: 1509 MITMMVETDDQSEEKTKILNKVNQFFVAVFTGECVMKV----FALRHY-YFTNGWNVFDF 1563
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ +L + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1564 IVVVLSIGSLVFSAILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1623
Query: 156 KNLRDV---IILTMFSLSVFALMGLQDSR 181
L ++ + L MF S+F + R
Sbjct: 1624 PALFNIGLLLFLVMFIYSIFGMASFPHVR 1652
>gi|1666092|emb|CAA70325.1| voltage-gated sodium channel [Mus musculus]
Length = 1958
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF++++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFILLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT +YTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV +DL
Sbjct: 151 DLP--EKLEYVFTVVYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAVDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGTLAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1307
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1431 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICLN 1490
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+V+ F ++T E +KV F L + Y + WN DF
Sbjct: 1491 MITMMVETDNQSEEKTKVLGRINQFFVAVFTGECVMKV----FALRQY-YFTNGWNVFDF 1545
Query: 107 IVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
IV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1546 IVVILSIASLLFSAILKSLESYFSPTFFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1605
Query: 156 KNLRDVIILTMFSLSVFALMGL 177
L ++ +L + ++++ G+
Sbjct: 1606 PALFNIALLLFLVMFIYSIFGM 1627
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 14 FSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TI 65
F+ +W P + + V + ++ P L I I+ N + M M P +
Sbjct: 637 FAQKYLIWECCPKWRKFKMVLLELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAML 696
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLA 124
++ ++FT +T E A K++A + + Y + WN D +++ ++ + + G+L+
Sbjct: 697 QAGNIVFTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKGSLS 752
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+ R+LR K P L ++ + SV L ++ + + +FAL+G Q
Sbjct: 753 VLRSLRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
>gi|131889984|ref|NP_033160.2| sodium channel protein type 10 subunit alpha isoform 2 [Mus
musculus]
gi|42768804|gb|AAS45602.1| tetrodotoxin resistant sodium channel Nav1.8 [Mus musculus]
gi|162318906|gb|AAI56476.1| Sodium channel, voltage-gated, type X, alpha [synthetic construct]
Length = 1957
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFIVLDKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E FT +YTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKLEYAFTVVYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVI 71
+W P + + V ++ P L I I+ N + M M P +++ ++
Sbjct: 643 IWECCPKWKKFKMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIV 702
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFR 130
FT +T E A K++A + + Y + WN D +++ ++ + + G+L+ LRTFR
Sbjct: 703 FTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFR 758
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ + + +FAL+G Q
Sbjct: 759 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1430 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMALICLN 1489
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1490 MITMMVETDNQSEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1544
Query: 107 IVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
IV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1545 IVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1604
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1605 PALFNIGLLLFLVMFIYSIFGM 1626
>gi|328927029|ref|NP_001192250.1| sodium channel protein type 10 subunit alpha isoform 1 [Mus
musculus]
gi|148677259|gb|EDL09206.1| mCG126202 [Mus musculus]
Length = 1958
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFIVLDKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E FT +YTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKLEYAFTVVYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1307
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVI 71
+W P + + V ++ P L I I+ N + M M P +++ ++
Sbjct: 643 IWECCPKWKKFKMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIV 702
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFR 130
FT +T E A K++A + + Y + WN D +++ ++ + + G+L+ LRTFR
Sbjct: 703 FTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFR 758
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ + + +FAL+G Q
Sbjct: 759 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1430 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMALICL 1489
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+V+ F ++T E +K+ F L + Y + WN D
Sbjct: 1490 NMITMMVETDNQSEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1544
Query: 106 FIVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIES 154
FIV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S
Sbjct: 1545 FIVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1604
Query: 155 VKNLRDV---IILTMFSLSVFAL 174
+ L ++ + L MF S+F +
Sbjct: 1605 LPALFNIGLLLFLVMFIYSIFGM 1627
>gi|56748701|sp|Q6QIY3.2|SCNAA_MOUSE RecName: Full=Sodium channel protein type 10 subunit alpha;
AltName: Full=Peripheral nerve sodium channel 3;
Short=PN3; AltName: Full=Sensory neuron sodium channel;
AltName: Full=Sodium channel protein type X subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.8
Length = 1958
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFIVLDKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E FT +YTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKLEYAFTVVYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1307
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVI 71
+W P + + V ++ P L I I+ N + M M P +++ ++
Sbjct: 643 IWECCPKWKKFKMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIV 702
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFR 130
FT +T E A K++A + + Y + WN D +++ ++ + + G+L+ LRTFR
Sbjct: 703 FTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFR 758
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ + + +FAL+G Q
Sbjct: 759 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1431 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMALICLN 1490
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1491 MITMMVETDNQSEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1545
Query: 107 IVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
IV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1546 IVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1605
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1606 PALFNIGLLLFLVMFIYSIFGM 1627
>gi|195165829|ref|XP_002023741.1| GL19974 [Drosophila persimilis]
gi|194105875|gb|EDW27918.1| GL19974 [Drosophila persimilis]
Length = 777
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/112 (91%), Positives = 107/112 (95%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 53 TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 112
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALA
Sbjct: 113 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALA 164
>gi|342837661|tpg|DAA34920.1| TPA_inf: voltage-dependent sodium channel SCN4A [Monodelphis
domestica]
Length = 1815
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 139/179 (77%), Gaps = 8/179 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI LFI+ TIL NC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSMIRRGAIK-------DLFIMITILANCVFMTMN 144
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYT ES +K+++RGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 145 NPPPWSKNVEYTFTGIYTCESLIKMLSRGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+GN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 MGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 263
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++ + T +W P+ ++++ I++ P L I I+ N + M M P TP E
Sbjct: 694 YKCAHTLLVWNCCAPWVKLKKILYLIVMDPFVDLGITICIVLNTVFMAMEHYPMTPQFEH 753
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D ++ L+ V +G+ ++
Sbjct: 754 VLTVGNLVFTGIFTAEMVLKLIA----LDPYEYFQQGWNIFDSFIVTLSLVELGLANVQG 809
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 810 LSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 865
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 85/163 (52%), Gaps = 19/163 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR ++ H F FI+ IL + + +E + +F+ ++ E
Sbjct: 1006 LRRACFTMVEHNWFETFIVFMILLSSGALAFEDIYIEQRKVIKTILEYADKVFSYVFVLE 1065
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1066 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGAIKSLRTLRALR 1121
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG
Sbjct: 1122 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMG 1164
>gi|301789271|ref|XP_002930052.1| PREDICTED: sodium channel protein type 10 subunit alpha-like
[Ailuropoda melanoleuca]
Length = 869
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 135/186 (72%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITVTILVNCVGM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L F YLRD WNWLDF VI LAY+
Sbjct: 151 TQTELP--ERIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWNWLDFSVITLAYIGEA 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
DL ++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GL
Sbjct: 209 TDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
++R+ I+ P L I I+ N + M M ++ ++FT +T E
Sbjct: 666 LKRLLFGIVTDPFAELTITLCIVVNTVFMAMEHHGMSAAFEAMLQIGNIVFTVFFTAEMV 725
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG-IDLGNLAALRTFRVL 132
K++A + + Y + WN D I++ ++ + +G G+L+ LRTFR++
Sbjct: 726 FKIIA----FDPYYYFQKRWNIFDCIIVTVSLIELGAAKKGSLSVLRTFRLV 773
>gi|449270913|gb|EMC81557.1| Sodium channel protein type 5 subunit alpha, partial [Columba
livia]
Length = 1088
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 141/194 (72%), Gaps = 13/194 (6%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP------LFSLFIITTILTNCI 55
F+V+++ K IFRF+AT ALW+L PF+PIRR AI ILVH LF+ FI+ TI TNC+
Sbjct: 87 FIVLNRQKTIFRFTATRALWILSPFHPIRRTAIKILVHSYPFFFTLFTYFIMCTITTNCV 146
Query: 56 LMIMPGTPTI-------ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV 108
M + + + E FTGIYTFES +K++ARGF L FT+LRD WNWLDF V
Sbjct: 147 FMALTESAKSSSSPSWNKYVEFTFTGIYTFESLIKILARGFCLNEFTFLRDPWNWLDFSV 206
Query: 109 IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
I +AYV LG+++ LRTFRVLRALKT+++VPGLK IVGA+I+SVK L +V+ILT+F
Sbjct: 207 IVMAYVGAFSKLGSVSVLRTFRVLRALKTISVVPGLKIIVGALIQSVKKLANVMILTVFC 266
Query: 169 LSVFALMGLQDSRG 182
LSVFAL+GLQ +G
Sbjct: 267 LSVFALIGLQLFKG 280
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAV 82
++VA +I P L I I+ N + M + E ++FTGI+T E +
Sbjct: 715 KKVAAFI-KDPFIDLTITVCIVVNTLFMALEHNNMSEEFKFMLKVGNLVFTGIFTAEMVL 773
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL----------GNLAALRTFRVL 132
K++A L+ + Y + WN D +++ L+ + + + G LR+FR+L
Sbjct: 774 KIIA----LDPYYYFQQHWNIFDSVIVTLSLIELSLPRYKGKKGRQRGGTFTVLRSFRLL 829
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R K P L T++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 830 RVFKLAKSWPTLNTLIKIIGNSLGALSNLTLVLAIIIFIFAIVGVQ 875
>gi|47226379|emb|CAG09347.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1604
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 138/189 (73%), Gaps = 11/189 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLF--------SLFIITTI 50
TF+V++KG IFRF+A AL++L PFNP+RR++I +L H PL L I+ TI
Sbjct: 89 TFIVINKGSYIFRFNAAPALYLLSPFNPLRRISIRVLTHSYPLNIHIGCTVNLLVIMCTI 148
Query: 51 LTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI 109
L NC LM G P ++ E FT IYTFES VK++ARGF L FT+LRD WNWLDF VI
Sbjct: 149 LANCGLMTQDGPPEWAKNVEYTFTAIYTFESLVKILARGFCLGKFTFLRDPWNWLDFSVI 208
Query: 110 ALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
+AYVT ++LGN + LRT RVLRALK ++++PGLKTIVGA+ +SVK L DV+ILT+F L
Sbjct: 209 VMAYVTEFVNLGNFSVLRTLRVLRALKAISVIPGLKTIVGALFQSVKKLADVMILTVFCL 268
Query: 170 SVFALMGLQ 178
SVFAL+GLQ
Sbjct: 269 SVFALIGLQ 277
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTN-----CILMIMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + C + + TI E + IFT I+ E
Sbjct: 895 LRKTCYQIVEHSWFESFIIFMILLSSGALACEDIYIEQRKTIKVLLEYADKIFTCIFILE 954
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K MA GF Y +AW WLDF+++ ++ +++ DLG + +LRT R LR
Sbjct: 955 MLLKWMAYGFA----KYFTNAWCWLDFLIVDVSLISLIANALGWSDLGAIKSLRTLRALR 1010
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1011 PLRALSRFEGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1060
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 41/209 (19%)
Query: 4 VVSKGKDIF-------RFSATDALWVLDPFNPIRR----VAIYIL---VHPLFSLFIITT 49
V+ G+DIF ++A L P PI R + YI F + I+
Sbjct: 1138 VIKCGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKIQGYIFDFTTKQAFDIIIMVL 1197
Query: 50 ILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMA-RGFILESFTYLRDAW 101
I N + M++ E + V+F I+T E +K+++ R + FTY W
Sbjct: 1198 IWLNMVTMMVETAEQSEKMKNTLNYINVVFIVIFTGECLLKMISLRHYY---FTY---GW 1251
Query: 102 NWLDFIVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGA 150
N DFIV+ L+ + G+ L ++ +R R+ R L+ + G++T++ A
Sbjct: 1252 NIFDFIVVILSII--GVFLSDIIESYFVSPTLFRVIRLARIGRVLRLIKSAKGIRTLLFA 1309
Query: 151 VIESVKNLRDVIILTMFSLSVFALMGLQD 179
++ S+ L ++ +L + ++A+ G+ +
Sbjct: 1310 LMMSLPALFNIGLLLFLVMFIYAIFGMSN 1338
>gi|426249795|ref|XP_004018634.1| PREDICTED: sodium channel protein type 10 subunit alpha [Ovis
aries]
Length = 1986
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 135/186 (72%), Gaps = 5/186 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL-FSLFIITTILTNCILM 57
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLWFSLFITITILVNCVGM 150
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAY
Sbjct: 151 TRTELP--ERMEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYAGEV 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
DL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GL
Sbjct: 209 TDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTVFCLSVFALVGL 268
Query: 178 QDSRGK 183
Q +G
Sbjct: 269 QLFKGN 274
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1155 VRKACFRIVEHSWFESFIVFMILLSSGALAFEDFYLDRKPTVKALLEYTDRVFTFIFVFE 1214
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ + ALRT R LR
Sbjct: 1215 MLLKWVAYGFK----NYFTNAWCWLDFLIVNISLTSLIAKALQYSDMAPIKALRTLRALR 1270
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1271 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1320
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
I++ P L I I+ N + M + +P E+ ++FT +T E K++A
Sbjct: 672 IVMDPFAELTITLCIVVNTVFMAVEHYGMSPAFEAMLQIGNIVFTVFFTAEMVFKIIA-- 729
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
L+ + Y + WN D I++ ++ + +G G+L LRTFR+LR K P L T+
Sbjct: 730 --LDPYYYFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFRLLRVFKLAKSWPTLNTL 787
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 788 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 818
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1444 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLN 1503
Query: 54 CILMIMPGTPTIESTEVIFTGIYTFESAV---KVMARGFILESFTYLRDAWNWLDFIVI- 109
I M++ E + I F AV + + + F L + Y + WN DF+V+
Sbjct: 1504 MITMMVETDEQSEKKTKVLNKINQFFVAVFTGECVMKMFALRHY-YFTNGWNVFDFVVVV 1562
Query: 110 ----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESVKNLR 159
+L + + LG+L + FRV+R L+ + G++T++ A++ S+ L
Sbjct: 1563 LSIGSLVFSAIVTSLGSLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALF 1622
Query: 160 DV---IILTMFSLSVFAL 174
++ + L MF S+F +
Sbjct: 1623 NIGLLLFLVMFIYSIFGM 1640
>gi|359500287|gb|AEV53349.1| NaV1.8, partial [Heterocephalus glaber]
Length = 1823
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 131/183 (71%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH F+ FI TI+ NC+ M
Sbjct: 28 TFMVLNKGRTISRFSATQALWLFSPFNLIRRSAIKVSVHSWFTSFITFTIVANCVCMTRS 87
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L F YLRD WNWLDF VI LAYV +L
Sbjct: 88 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWNWLDFSVITLAYVGTATEL 145
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 146 KGFSGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLTDVTILTVFCLSVFALVGLQLF 205
Query: 181 RGK 183
+G
Sbjct: 206 KGN 208
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL +C L P + E + +FT I+ FE
Sbjct: 1075 LRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYADRVFTFIFVFE 1134
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ D+ ++ ALRT R LR
Sbjct: 1135 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLIAKILKYSDMESIKALRTLRALR 1190
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1191 PLRALSRFEGMRVVVDALVGAIPSIVNVLLVCIIFWLIFSIMGVNLFAGK 1240
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++ V ++ P L I I+ N + M M + E ++FT +T E
Sbjct: 589 LKAVLFELVTDPFAELTITLCIVVNTVFMAMEHHGMSSAFETMLQIGNIVFTIFFTAEMV 648
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
K++A + + Y + WN D I++ ++ + + + G+L+ LRTFR+LR K
Sbjct: 649 FKIIA----FDPYYYFQKKWNIFDCIIVTVSLLELSVVRKGSLSVLRTFRLLRVFKLAKS 704
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ I+ + +FAL+G Q
Sbjct: 705 WPTLNTLIKIIGNSVGALGNLTIILAIIVFIFALVGKQ 742
>gi|47211574|emb|CAF95935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 794
Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats.
Identities = 119/257 (46%), Positives = 146/257 (56%), Gaps = 79/257 (30%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-------------------- 40
TF+V++KGK IFRFSAT AL+V PF+P+RR+AI ILVH
Sbjct: 120 TFIVLNKGKAIFRFSATSALYVFSPFHPVRRIAIKILVHSYPSAAACSPRAERARQKALK 179
Query: 41 -----------------LFSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAV 82
LFSLFI+ TILTNC M M + E FTGIYTFES +
Sbjct: 180 SQMFGVGSVTDACAVITLFSLFIMCTILTNCCFMAMSEPANWAKYLEYTFTGIYTFESLI 239
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVI--------------------------------- 109
K++ARGF + FT+LRD WNWLDF VI
Sbjct: 240 KILARGFCVGPFTFLRDPWNWLDFSVIVSPAATRGRHVAENPPILASSSSPVRPCLPCPA 299
Query: 110 --------ALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV 161
+ AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV
Sbjct: 300 HRSPTDPWSPAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADV 359
Query: 162 IILTMFSLSVFALMGLQ 178
+ILT+F LSVFAL+GLQ
Sbjct: 360 MILTVFCLSVFALIGLQ 376
>gi|344288113|ref|XP_003415795.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 10
subunit alpha-like [Loxodonta africana]
Length = 1961
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 135/189 (71%), Gaps = 8/189 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL----FSLFIITTILTNC 54
TF+V++KG+ I RFSAT ALW+ PF+ +RR AI + VH PL FSLFI TI NC
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFHLLRRTAIKVSVHSYPLHGXWFSLFITATIFVNC 150
Query: 55 ILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+ M P + E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAY+
Sbjct: 151 VCMTQTDFP--DKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYI 208
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
IDL ++ LRTFRVLRALKTV+++PGLK I GA+I SVK L DV ILT+F LSVFAL
Sbjct: 209 GEAIDLRGVSGLRTFRVLRALKTVSVIPGLKVIAGALIHSVKKLADVTILTIFCLSVFAL 268
Query: 175 MGLQDSRGK 183
+GLQ +G
Sbjct: 269 VGLQLFKGN 277
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + + PT+ E + +FT I+ FE
Sbjct: 1148 VRKTCFRIVEHSWFESFIVFMILLSSGSLAFEDYYLEEKPTVKAMLEYADRVFTFIFVFE 1207
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIA------LAYVTMGIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ +A + D+ ++ ALRT R LR
Sbjct: 1208 MLLKWVAYGFK----KYFTNAWCWLDFLIVDISLTSLIAKILQYSDMASIKALRTLRALR 1263
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1264 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1313
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
I+ P L I I+ N + M M +PT ++ ++FT +T E K++A
Sbjct: 668 IVTDPFAELTITLCIVVNTVFMAMEHHRMSPTFDAMLQMGNIVFTIFFTAEMVFKIIA-- 725
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D +++ ++ + +G+ G+L+ LRTFR+LR K P L T+
Sbjct: 726 --FDPYYYFQKKWNIFDCLIVTVSLMELGMSKKGSLSVLRTFRLLRVFKLAKSWPTLNTL 783
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 784 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 814
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1437 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKYQGFVFDIVTRQAFDIVIMVLICLN 1496
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+++ F ++T E +K+ F L + Y + WN DF
Sbjct: 1497 MITMMVETDDQSEEKTKILNKINQFFVAVFTCECVLKM----FALRHY-YFTNGWNVFDF 1551
Query: 107 IVIALA-----YVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ L+ + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1552 IVVLLSIGSQVFSVIMKSLDNYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1611
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1612 PALFNIGLLLFLVMFIYSIFGM 1633
>gi|149728754|ref|XP_001502250.1| PREDICTED: sodium channel protein type 10 subunit alpha-like
isoform 2 [Equus caballus]
Length = 1972
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 137/191 (71%), Gaps = 10/191 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PL------FSLFIITTILT 52
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH PL FSLFI+ TI+
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSYPLHGLLRWFSLFIMVTIVI 150
Query: 53 NCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
NC+ M P E E IFT IYTFE+ +K++ARGF L F Y+RD WNWLDF VI LA
Sbjct: 151 NCVFMTQTEFP--ERLEYIFTVIYTFEALIKILARGFCLNEFAYMRDLWNWLDFSVITLA 208
Query: 113 YVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
Y+ +DL ++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVF
Sbjct: 209 YLGEVMDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLTDVTILTVFCLSVF 268
Query: 173 ALMGLQDSRGK 183
AL+GLQ +G
Sbjct: 269 ALVGLQLFKGN 279
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1157 VRKACYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKAMLEYTDRVFTFIFVFE 1216
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIA------LAYVTMGIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ +A + D+ ++ ALRT R LR
Sbjct: 1217 MLLKWVAYGFK----NYFTNAWCWLDFLIVNISLTSLIAKILQYSDMASIKALRTLRALR 1272
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1273 PLRALSRFEGMRVVVDALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1322
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
I+ P L I I+ N + M M + T E+ ++FT +T E K++A
Sbjct: 678 IVTDPFAELTITLCIVVNTVFMAMEHHGMSSTFEAMLQIGNIVFTVFFTAEMVFKIIA-- 735
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
L+ + Y + WN D I++ ++ + +G G+++ LRTFR+LR K P L T+
Sbjct: 736 --LDPYYYFQKRWNIFDCIIVTVSLMELGAAKKGSMSVLRTFRLLRVFKLAKSWPTLNTL 793
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESH 189
+ + SV L ++ I+ + VFAL+G Q D+ H
Sbjct: 794 IKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDSYCDKRH 835
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1446 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLN 1505
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1506 MITMMVETDEQSEEKTRVLNKINQFFVAVFTGECVMKM----FALRHY-YFTNGWNVFDF 1560
Query: 107 IVIALA-----YVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ L+ + + LGN + FRV+R L+ + G++T++ A++ S+
Sbjct: 1561 IVVVLSIGSLMFSAILTSLGNFLSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1620
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1621 PALFNIGLLLFLVMFIYSIFGM 1642
>gi|116451|sp|P02719.1|SCNA_ELEEL RecName: Full=Sodium channel protein; AltName: Full=Na(+) channel
gi|62777|emb|CAA25587.1| unnamed protein product [Electrophorus electricus]
gi|1041049|gb|AAA79960.1| Na+ channel [Electrophorus electricus]
gi|224225|prf||1012288A protein,Na channel
Length = 1820
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG I RF+A AL++ PFNPIRR AI + V+ F+ FI+ TI +NCI M +
Sbjct: 83 TFIVISKGNIINRFNAERALYIFSPFNPIRRGAIRVFVNSAFNFFIMFTIFSNCIFMTIS 142
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E FTGIYTFE VKV++RGF + FT+LRD WNWLDF V+ + Y+T ID
Sbjct: 143 NPPAWSKIVEYTFTGIYTFEVIVKVLSRGFCIGHFTFLRDPWNWLDFSVVTMTYITEFID 202
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L N++ALRTFRVLRALKT+ I PGLKTIV A+IES+K + DV+ILT+FSL+VF L G+Q
Sbjct: 203 LRNVSALRTFRVLRALKTITIFPGLKTIVRALIESMKQMGDVVILTVFSLAVFTLAGMQ 261
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FII IL + ++ +E + +FT ++ E
Sbjct: 989 LRRTCYTIVEHDYFETFIIFMILLSSGVLAFEDIYIWRRRVIKVILEYADKVFTYVFIVE 1048
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI--------DLGNLAALRTFRV 131
+K +A GF Y DAW WLDF+++ + MGI +LG + LRT R
Sbjct: 1049 MLLKWVAYGFK----RYFTDAWCWLDFVIVGAS--IMGITSSLLGYEELGAIKNLRTIRA 1102
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1103 LRPLRALSRFEGMKVVVRALLGAIPSIMNVLLVCLMFWLIFSIMGVNLFAGK 1154
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ +++ ++++ P LFI I+ N + M + P ES + ++FT I+
Sbjct: 551 PWVFLKKWVHFVMMDPFTDLFITLCIILNTLFMSIEHHPMNESFQSLLSAGNLVFTTIFA 610
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I+++L+ + +G+ ++ ++ LR+ R+LR K
Sbjct: 611 AEMVLKIIA----LDPYYYFQQTWNIFDSIIVSLSLLELGLSNMQGMSVLRSLRLLRIFK 666
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ I+ + +FAL+G Q
Sbjct: 667 LAKSWPTLNILIKIICNSVGALGNLTIVLAIIVFIFALVGFQ 708
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYT 77
P N ++ V I+ P +FI+ I N + M++ + VIF I+T
Sbjct: 1307 PSNVVQGVVYDIVTQPFTDIFIMALICINMVAMMVESEDQSQVKKDILSQINVIFVIIFT 1366
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K++A L + + WN DF V+ ++ + G+ L ++ +
Sbjct: 1367 VECLLKLLA----LRQY-FFTVGWNVFDFAVVVISII--GLLLSDIIEKYFVSPTLFRVI 1419
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1420 RLARIARVLRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1472
>gi|55741729|ref|NP_001003203.1| sodium channel protein type 10 subunit alpha [Canis lupus
familiaris]
gi|56748629|sp|O46669.1|SCNAA_CANFA RecName: Full=Sodium channel protein type 10 subunit alpha;
AltName: Full=NaNG; AltName: Full=Sodium channel protein
type X subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.8
gi|2760341|gb|AAC39164.1| TTX-resistant sodium channel [Canis lupus familiaris]
Length = 1962
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 131/183 (71%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLDKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVGMTQT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P + E +FT IYTFE+ +K++ARGF L F YLRD W+WLDF VI LAY+ L
Sbjct: 151 ELP--DRIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWDWLDFSVITLAYIGEATAL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ E
Sbjct: 1148 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYHLDQKPTVKALLEYTDRMFTFIFVLE 1207
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ D+ ++ ALRT R LR
Sbjct: 1208 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLIAKILQYSDVASIKALRTLRALR 1263
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F+ MG+ GK
Sbjct: 1264 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSTMGVNFFAGK 1313
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++ V I+ P L I+ N + M M + E ++FT +T E
Sbjct: 663 LKTVLFGIVTDPFAELTTTLCIVVNTVFMAMEHHGMSSAFEAMLQIGNIVFTVFFTAEMV 722
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
K++A + + Y + WN D I++ ++ + +G G+L+ LRTFR+LR K
Sbjct: 723 FKIIA----FDPYYYFQKRWNIFDCIIVTVSLIELGAARKGSLSVLRTFRLLRVFKLAKS 778
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ I+ + VFAL+G Q
Sbjct: 779 WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 816
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1437 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTKQAFDIVIMVLICLN 1496
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+++ F ++T E +K+ F L + Y + WN DF
Sbjct: 1497 MITMMVETDEQSAEKTKILNKINQFFVAVFTGECVMKM----FALRHY-YFTNGWNVFDF 1551
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ +L + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1552 IVVVLSIGSLVFSVILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1611
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1612 PALFNIGLLLFLVMFIYSIFGM 1633
>gi|345318735|ref|XP_003430053.1| PREDICTED: sodium channel protein type 4 subunit alpha-like,
partial [Ornithorhynchus anatinus]
Length = 1039
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 105/187 (56%), Positives = 139/187 (74%), Gaps = 16/187 (8%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLF-------IITTILTN 53
TF+V++KG+ IFRFSAT AL++L PF+ IRR AI +L+H LFS + +
Sbjct: 101 TFIVLNKGRAIFRFSATPALYLLSPFSLIRRGAIRVLIHSLFSFLPPCLSLLTKLLLKES 160
Query: 54 CILM--IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
C L+ +P T FTGIY+FES +K++ARGF ++ FT+LRD WNWLDF VI +
Sbjct: 161 CSLLDICVPCWYT-------FTGIYSFESLIKMLARGFCIDDFTFLRDPWNWLDFSVIMM 213
Query: 112 AYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
AY+T +D+GN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSV
Sbjct: 214 AYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSV 273
Query: 172 FALMGLQ 178
FAL+GLQ
Sbjct: 274 FALVGLQ 280
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTF 129
+FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ D+ L+ LR+F
Sbjct: 734 VFTGIFTAEMVLKLVA----LDPYEYFQQGWNVFDSIIVTLSLVELGLADVQGLSVLRSF 789
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R++R K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 790 RLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 838
>gi|432092523|gb|ELK25138.1| Sodium channel protein type 10 subunit alpha [Myotis davidii]
Length = 1944
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 130/183 (71%), Gaps = 6/183 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++ G+ I RFSAT ALW+ PFNPIRR AI + FS FI TI+ NC+ M
Sbjct: 99 TFMVLTHGRTISRFSATRALWLFSPFNPIRRTAIKVW----FSTFITVTIVANCVCMTRT 154
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++A GF L FTYLRD WNWLDF VI LAY++ DL
Sbjct: 155 DLP--EKMEYVFTVIYTFEALIKIVAGGFCLNEFTYLRDPWNWLDFSVITLAYISTMTDL 212
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F L VFAL+GLQ
Sbjct: 213 QGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTVFCLGVFALVGLQLF 272
Query: 181 RGK 183
+G
Sbjct: 273 KGN 275
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 91/165 (55%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + + PT+++ T+ +FT I+ FE
Sbjct: 1147 VRKTCYRIVEHSWFESFIVFMILLSSGSLAFEDYYLDQKPTVKALLDYTDRVFTFIFVFE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ D+ ++ ALRT R LR
Sbjct: 1207 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLIAKILKYSDMASIKALRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1263 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGMN 1307
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 32/199 (16%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1417 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDISIMVLICL 1476
Query: 53 NCILMIMPGTPTIESTEVIFTGIYTFESAV---KVMARGFILESFTYLRDAWNWLDFIVI 109
N + M++ E I I F AV + + + F L + ++ + WN DFIV+
Sbjct: 1477 NMLTMMVETDDQSEEKTKILNKINQFFVAVFTGECVLKMFALRQYFFM-NGWNVFDFIVV 1535
Query: 110 ALAYVTMGI-----DLGN------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNL 158
L+ ++ + L N L +R R+ R L+ + G++T++ A++ S+ L
Sbjct: 1536 VLSIGSLVVFAIISSLENYFSPTILRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPAL 1595
Query: 159 RDV---IILTMFSLSVFAL 174
++ + L MF S+F +
Sbjct: 1596 FNIGLLLFLVMFIYSIFGM 1614
>gi|81394320|gb|AAK55442.2| Nav1.4a [Sternopygus macrurus]
Length = 1823
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 133/179 (74%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+ +SKG I RF+A A PFN +RR AI +LVH LFS I+ IL NCILM +
Sbjct: 87 TFIAISKGNTINRFNAEAAFNTFSPFNSMRRAAIKVLVHSLFSSIIMVIILANCILMTIF 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E + TGIYTFE+ +KV++RGF FT+LRD WN LDF+VI++AY+T +D
Sbjct: 147 ELPAWCKIVEYVLTGIYTFETIIKVLSRGFCFGPFTFLRDPWNCLDFMVISMAYITEFVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRAL+T+ + PGL+TIV A+I+SVK + DVIILT+F+LSVF L+GLQ
Sbjct: 207 LGNMSALRTFRVLRALRTITVSPGLRTIVAALIQSVKKMGDVIILTLFALSVFTLVGLQ 265
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 89/165 (53%), Gaps = 18/165 (10%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ ++++A +I++ P L I T I+ N + M M P E+ + ++FT I+T
Sbjct: 561 PWRMLKKLAHFIVMDPFMDLGITTCIILNTLFMSMEHYPMSETFQHVLTIGNLVFTTIFT 620
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ L+ V + + ++ L+ LR+FR++R K
Sbjct: 621 AEMVLKIIA----LDPYYYFQVGWNIFDCIIVTLSLVELSLSNMPGLSVLRSFRLMRIFK 676
Query: 137 TVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L I+G + ++ NL V+ + +F +FA++G Q
Sbjct: 677 LAKSWPTLNMLIKIIGNSMGALGNLTFVLAIVIF---IFAVVGFQ 718
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 72/125 (57%), Gaps = 10/125 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GI 118
+E +++FT I+ E +K A GF Y AW WLDF ++ ++ +++
Sbjct: 1031 LEYADIVFTYIFVVEMFLKWTAYGFK----AYFTSAWCWLDFFIVDVSVISLVANVLGYA 1086
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LG + +LRTFR LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1087 ELGPVRSLRTFRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN 1146
Query: 179 DSRGK 183
GK
Sbjct: 1147 LFAGK 1151
>gi|449492114|ref|XP_002186794.2| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Taeniopygia guttata]
Length = 1935
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 134/188 (71%), Gaps = 6/188 (3%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG 61
F+V++K K I+RF+AT L P RR AI IL+H LF+ FI+ TI+TNC+ M +
Sbjct: 87 FIVLNKQKTIYRFTATPCPVDLSPXXXXRRRAIKILIHSLFTWFIMCTIITNCVFMSLAE 146
Query: 62 TPTIEST------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ S E FTGIYTFES +K++A GF L FT+LRD WNWLDF VI +AYV
Sbjct: 147 SSKTSSPSWNTYVEFTFTGIYTFESLIKILATGFCLNEFTFLRDPWNWLDFTVIVMAYVG 206
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
DLG+++ LRTFRVLRALKT+++VPGLK IVGA+I+SVK L DV+ILT+F LSVFAL+
Sbjct: 207 AFSDLGSVSVLRTFRVLRALKTISVVPGLKIIVGALIQSVKKLADVMILTVFCLSVFALI 266
Query: 176 GLQDSRGK 183
GLQ +G
Sbjct: 267 GLQLFKGN 274
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV---------IFTGIYTFE 79
+R+ I+ H F FI+ IL + + + + +FT I+ E
Sbjct: 1134 LRKTCYQIVEHSWFESFIVFMILLSSGALAFEDIHIHKRERIQAMLGFLDKMFTYIFVLE 1193
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFRVLRALKTV 138
+K +A GF Y +AW WLDF++I ++ + + G G + +LRT R LR L+ +
Sbjct: 1194 MLLKWVAYGFK----KYFTNAWCWLDFLIIDVSLINLFGSTFGPMKSLRTLRALRPLRAL 1249
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1250 SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1294
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPT----IESTEVIFTGIYTFESAV 82
+VA +I P F L I I+ N + M + +PT ++ ++FTGI+T E +
Sbjct: 693 EKVAAFI-QDPFFDLTITVCIVMNTLFMALEHNNMSPTFKFMLKIGNLVFTGIFTAEMIL 751
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL----------GNLAALRTFRVL 132
K++A L+ + Y + WN D +++ L+ + + G L+ LR+FR+L
Sbjct: 752 KIIA----LDPYYYFQKPWNIFDSVIVTLSLIELSFPRHKSKKERGKGGTLSVLRSFRLL 807
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R K P L T++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 808 RVFKLAKSWPTLNTLIKIICNSLGALSNLTLVLAIVVFIFAIVGVQ 853
>gi|291411650|ref|XP_002722101.1| PREDICTED: sodium channel, voltage-gated, type X, alpha-like
[Oryctolagus cuniculus]
Length = 1826
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 135/183 (73%), Gaps = 3/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR+AI + VH F+L I TI+TNC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRMAIKMSVHMCFTLCITITIITNCVYMTQT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
+ IE +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV + DL
Sbjct: 151 ESSEIE---YVFTVIYTFEALLKILARGFCLNEFTYLRDPWNWLDFSVITLAYVAIAKDL 207
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKT +++PGLK IVGA++ SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 208 RGISGLRTFRVLRALKTFSVIPGLKVIVGALVHSVRKLVDVTILTIFCLSVFALVGLQLF 267
Query: 181 RGK 183
+G
Sbjct: 268 KGN 270
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL +C L P + E T+ +FT ++ E
Sbjct: 1019 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDCYLDKKPTVQALLEYTDRVFTFVFVLE 1078
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++A++ ++ D+ ++ ALRT R LR
Sbjct: 1079 MVLKWVAYGFK----KYFTNAWCWLDFLIVAISLTSLIAKILKYSDVESIKALRTLRALR 1134
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1135 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1184
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMP--GTPT-----IESTEVIFTGIYTFESAVKVMARG 88
++ P L + I+ N I M M G + +++ ++FT +T E K++A
Sbjct: 652 LVTDPFTELTVTLCIVVNTIFMAMEHHGMSSTFDTMLQTGNIVFTIFFTAEMVFKIIA-- 709
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRV 131
+ + Y + WN D I++ ++ + +G+ G+L+ LRTFR+
Sbjct: 710 --FDPYYYFQKRWNIFDCIIVTVSLLELGMSKKGSLSVLRTFRL 751
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVI------FTGIYT 77
P N + I+ F + I+ I N I +M+ + E +V+ F ++T
Sbjct: 1339 PLNKCQGFVFDIVTTQAFDIAIMALICLNMITMMVETDDQSEEKAQVLSRINQFFVAVFT 1398
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-----------YVTMGIDLGNLAAL 126
E +K+ F L + Y WN DFIV+ L+ V I L +
Sbjct: 1399 AECVLKI----FALRHY-YFTSGWNVFDFIVMVLSIGSLLFSALLKSVESLISPTLLRVI 1453
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1454 RLARIGRILRLIRAAKGIRTLLFALLMSLPALFNIGLLLFLVMFIYSIFGM 1504
>gi|444721579|gb|ELW62310.1| Sodium channel protein [Tupaia chinensis]
Length = 1734
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 132/178 (74%), Gaps = 19/178 (10%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH + T
Sbjct: 87 TFIVLNKGKAIFRFNATPALYLLSPFSPLRRISIKILVHSYPFQYAYLQGYT-------- 138
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
FTGIYTFES VK++ARGF + FT+LRD WNWLDFIVI AY+T ++L
Sbjct: 139 -----------FTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVNL 187
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 188 GNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 245
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1027 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1086
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ +T+ DLG + +LRT R LR
Sbjct: 1087 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLITLVASTLGYSDLGPIKSLRTLRALR 1142
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1143 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1192
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTF 129
+FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+ L+ LR+F
Sbjct: 628 VFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLSDVEGLSVLRSF 683
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 684 RLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 732
>gi|350591076|ref|XP_003483197.1| PREDICTED: sodium channel protein type 11 subunit alpha [Sus
scrofa]
Length = 1156
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 99/187 (52%), Positives = 136/187 (72%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++ PFN IR +AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKNRTIYRFSAKRALFIFGPFNSIRSLAIRISVHSLFSMFIICTVVINCVFMATA 149
Query: 61 -----GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
T ++ E IFTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVIA A+V+
Sbjct: 150 HGKKSSTVDTDNAEYIFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIATAFVS 209
Query: 116 MGIDLG----NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
++ +L++LRTFRV RALK +++V GLK IVGA++ SVK L DV+ILT+F LS+
Sbjct: 210 FSLEDKVSSISLSSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMILTLFCLSI 269
Query: 172 FALMGLQ 178
FAL+G Q
Sbjct: 270 FALVGQQ 276
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 57 MIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY--V 114
M+ PG ++F GI+ E +K++A L+ + Y R WN D IV L++ V
Sbjct: 606 MLCPGN-------LVFAGIFMAEMCLKIIA----LDPYHYFRRGWNIFDSIVALLSFADV 654
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+ + + R+ RVLR K P L T++ + SV L ++ ++ + +F++
Sbjct: 655 MLNTEKKSWKLFRSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSV 714
Query: 175 MGLQ 178
+G+Q
Sbjct: 715 VGMQ 718
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P I++ T+ IFT I+ E
Sbjct: 1039 LRKTCYQIVNHSWFESFIIFVILLSSGALVFEDIHLEKQPQIQTLLNCTDHIFTYIFVLE 1098
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
+K +A GF Y AW WLDF+++ ++
Sbjct: 1099 MGLKWVAFGFQ----KYFTSAWCWLDFVIVIVS 1127
>gi|431908874|gb|ELK12466.1| Sodium channel protein type 4 subunit alpha [Pteropus alecto]
Length = 1807
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 136/181 (75%), Gaps = 16/181 (8%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAI---YILVHPLFSLFIITTILTNCILM 57
TF+V++KGK IFRFSAT AL++L PF+ IRR AI + +HP + C+ +
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIIRRGAIKVHHCHLHPCLGM--------TCLAL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
G P T FTGIYTFES +K++ARGF +++FT+LRD WNWLDF VI +AY+T
Sbjct: 144 ---GGPL--PTRYTFTGIYTFESLIKMLARGFCIDNFTFLRDPWNWLDFSVIMMAYLTEF 198
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 199 VDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGL 258
Query: 178 Q 178
Q
Sbjct: 259 Q 259
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 540 PWVKFKNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDQVLSVGNLVFTGIFT 599
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 600 AEMVLKLIA----MDPYEYFQQGWNVFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 655
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 656 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 697
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 993 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKIFTYIFILE 1052
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1053 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1108
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1109 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1158
>gi|431894862|gb|ELK04655.1| Sodium channel protein type 3 subunit alpha [Pteropus alecto]
Length = 1930
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 129/179 (72%), Gaps = 24/179 (13%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT A + I+ TILTNC+ M +
Sbjct: 89 TFIVLNKGKAIFRFSATSAF-----------------------MLIMCTILTNCVFMTLS 125
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 126 NPPDWTKNVEYTFTGIYTFESFIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 185
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 186 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 244
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P
Sbjct: 708 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 767
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 768 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 823
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 824 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 879
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1172 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1231
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1232 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1287
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1288 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1337
>gi|326670825|ref|XP_003199298.1| PREDICTED: sodium channel protein type 2 subunit alpha-like [Danio
rerio]
Length = 311
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 132/178 (74%), Gaps = 14/178 (7%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VVSK K+I+RF+AT AL++ FN +RR++I IL C+ ++
Sbjct: 90 TFIVVSKKKEIYRFNATPALYIFSSFNLLRRISI--------------QILKLCLSLLNA 135
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
GT T+ +FTGIYT E+ VK+ ARGF + FT+LRD WNWLDFIVI +AYVT +DL
Sbjct: 136 GTDTLVLNRYVFTGIYTLEALVKITARGFCVGRFTFLRDPWNWLDFIVIVMAYVTEFVDL 195
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
G+++ALR FRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 196 GSVSALRAFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALVGLQ 253
>gi|363729760|ref|XP_425965.3| PREDICTED: sodium channel protein type 5 subunit alpha-like [Gallus
gallus]
gi|342837677|tpg|DAA34928.1| TPA_inf: voltage-dependent sodium channel SCN11A [Gallus gallus]
Length = 1781
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRF+AT AL +L PFNPIR+ AI IL+H LF FI T++ NC M M
Sbjct: 92 TFMVINKRRTIFRFTATPALCILGPFNPIRKAAIKILIHSLFVGFITCTVILNCASMAMN 151
Query: 61 GTP-TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P TE IFT IYT E +KV+ARG + FT+LRD WN LDF+V+ + Y+ +
Sbjct: 152 NYPLDFNGTEHIFTAIYTGEILIKVLARGLVWNEFTFLRDPWNVLDFLVLVVTYIIICTK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GN++ALRTFRVLR LK ++++PGLK IV ++IESVK L DV+ILT+F LS+FAL+GLQ
Sbjct: 212 SGNISALRTFRVLRTLKAISVIPGLKVIVNSLIESVKKLTDVLILTVFCLSIFALIGLQ 270
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 85/164 (51%), Gaps = 19/164 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FII I+ + + +E +++FT I+ E
Sbjct: 1004 RKTCYKIVKHSWFENFIIFVIVLSSAALAFEDIHLKDRKTVKKLLEYADMVFTYIFIMEM 1063
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL------GNLAALRTFRVLRA 134
+K +A G +Y +AW WLDFI++ ++ + + I+L G L +LRT R LR
Sbjct: 1064 LLKWVAYGL----HSYFTNAWCWLDFIIVCVSIIYIYINLLCCREIGALKSLRTLRALRP 1119
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G+K +V A++ ++ ++ +V+++ + +F ++G++
Sbjct: 1120 LRALSRFEGIKVVVNALLGAIPSILNVLLVCVVFWLLFNIVGVK 1163
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 18/174 (10%)
Query: 13 RFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIES-- 67
R +W PF ++ I + P+ L I+ I+ N I M + PG + E
Sbjct: 556 RLGQKYLIWNCCPFWRAVKGKVQLIALDPVVDLIIMICIIVNTIFMALEHPGMTSTEKRL 615
Query: 68 ---TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA 124
++ +FT ++ E +K++A L+ + Y + WN D IV+ + ++ A
Sbjct: 616 ICISDKVFTMVFAAEMVLKIIA----LDPYYYFQQKWNIFDSIVVMIGLISFH------A 665
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L FR+LR K + P L T++ ++ SV L ++ ++ + ++ +FA++G Q
Sbjct: 666 NLSFFRLLRIFKLAKMWPALNTLMKIILNSVGALGNLTLVLIITVFIFAVVGKQ 719
>gi|354487657|ref|XP_003505988.1| PREDICTED: sodium channel protein type 11 subunit alpha-like
[Cricetulus griseus]
Length = 1766
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 135/182 (74%), Gaps = 5/182 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNP+R + I I VH LFS+ II T+L NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPVRSLVIRISVHSLFSMLIICTVLINCMFMANS 149
Query: 61 GTPTI--ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
G ++ E +E IFTGIY E+ +K++ARGFIL+ F++LRD WNWLDFIVI A T
Sbjct: 150 GDGSLLMEISEYIFTGIYILEAVIKILARGFILDEFSFLRDPWNWLDFIVIGTAVATCFP 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
G + NL+ALRTFRV RALK +++V GLK IVGA++ SVK L DV++LT+F LS+FAL+G
Sbjct: 210 GTKV-NLSALRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMVLTLFCLSIFALVG 268
Query: 177 LQ 178
Q
Sbjct: 269 QQ 270
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P IE T+ IFT I+ E
Sbjct: 1025 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNISKRPQIERLLRCTDNIFTFIFILE 1084
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ V++ ++L +L + RT R LR L+ ++
Sbjct: 1085 MILKWVAFGFR----RYFTSAWCWLDFLIVIVSVVSL-MNLPSLKSFRTLRALRPLRALS 1139
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1140 QFEGMKVVVNALISAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1183
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-------LGNL 123
+FTGI+ E +K++A L+ + Y R WN D IV L+ + + N
Sbjct: 609 VFTGIFVAEMCLKIIA----LDPYHYFRHGWNIFDSIVALLSLADVLYNNLSDKSSRSNR 664
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ L +FRVLR K P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 665 SFLASFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 719
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P N + ++ +F + I+ I+ N I+M+ + + I F I+T
Sbjct: 1333 PLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAEYEGQTQEVKNIFDIINIAFVVIFT 1392
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGN--------LAALRT 128
E +K+ F L + Y + WN D +V+ L+ ++ + L N +R
Sbjct: 1393 IECLIKM----FALRQY-YFTNGWNLFDCVVVVLSIISSLVSGLENSVPFPPTLFRIVRL 1447
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1448 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMN 1497
>gi|260528200|gb|ACX44802.1| putative voltage-gated sodium channel FPC1 alpha subunit
[Periplaneta americana]
Length = 1553
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 135/178 (75%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVV+K DIFRFS +LW+LDPF PIRRVAI +V P+FS FI+ TIL +CI MIMP
Sbjct: 101 TFVVVTKAGDIFRFSGEKSLWMLDPFTPIRRVAISTMVQPIFSYFIMITILIHCIFMIMP 160
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
T T E++F IYT E VKV+ARGFIL F YLRD WNWLDF+V + Y+T+ +DL
Sbjct: 161 ATQTTYILELVFLSIYTIEVVVKVLARGFILHPFAYLRDPWNWLDFLVTLIGYITLVVDL 220
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
G+L ALR FRVLR+ +TV IVPG +TIV A+ S+ +L+D+++L +FSL VFA++GLQ
Sbjct: 221 GHLYALRAFRVLRSWRTVTIVPGWRTIVDALSLSITSLKDLVLLLLFSLFVFAVLGLQ 278
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 17 TDALWVLD---PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IE 66
TD L V D P+ ++ +++ P F LFI I+ N M + +
Sbjct: 493 TDFLCVWDCCVPWQKLQGAIGAVVLSPFFELFIAVIIVLNITFMALDHHDMNIEFERILR 552
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
+ IFT IY E+ +K++A L Y +D+WN DFI++ A + +G++ + L+
Sbjct: 553 TGNYIFTSIYIVEAVLKIIA----LSPKFYFKDSWNVFDFIIVVFAILELGLEGVQGLSV 608
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+FR+LR + P L + + +S +V+ + L +FA++G+Q
Sbjct: 609 FRSFRLLRVFRLAKFWPTLNNFMSVMTKSYGAFVNVMYVMFLLLFIFAIIGMQ 661
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 13 RFSATDALWVLDPFNPIRRVAIYILVHPLFSLFI-----ITTILTNCILMIMPGTPTIES 67
R S+ +W + IRRV + + F F+ IT++L + +P P + +
Sbjct: 834 RDSSVQRMW-----SNIRRVCFLLAKNKYFQKFVTAVLVITSVLLALEDIYLPQRPVLVN 888
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA---LAYVTMGIDL 120
+ + T + E + + A GF Y W WLDFIV+ L +V M +
Sbjct: 889 ITLYVDYVLTAFFVIEMIIMLFAVGFK----KYFTSKWYWLDFIVVVAYLLNFVLMCAGI 944
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
L LR RV R + ++ V G++ + ++E+V ++ +VI++ +F VFA+MG+Q
Sbjct: 945 EALQTLRLLRVFRLFRPLSKVNGMQVVTSTLVEAVPHIFNVILVGIFFWLVFAIMGVQLF 1004
Query: 181 RGK 183
GK
Sbjct: 1005 AGK 1007
>gi|158286307|ref|XP_308670.4| AGAP007086-PA [Anopheles gambiae str. PEST]
gi|157020405|gb|EAA04706.4| AGAP007086-PA [Anopheles gambiae str. PEST]
Length = 2961
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 96/186 (51%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L+ P++P RR +Y+ + F F++ TIL NCI +
Sbjct: 96 TFCVVSKRFRKNYIHRFTGTKSLFCFTPWSPTRRACVYLATNQFFDYFVMATILFNCIFL 155
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M + TIE E IF IYT E +K++A+GFIL +TYLR+ WNWLDF+VI Y T+
Sbjct: 156 AM--SETIEEAEYIFLAIYTSEMIIKMIAKGFILNKYTYLRNPWNWLDFVVITSGYATIA 213
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+D+GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 214 LDVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 273
Query: 178 QDSRGK 183
Q G+
Sbjct: 274 QVYMGE 279
Score = 37.0 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARG 88
I+ PLF L I I+ N + + + ++ +FT I+T E +KVMA
Sbjct: 686 IVKDPLFELGITLCIVLNTMFLALEHHGMNANVRDALDIGNKVFTSIFTLECILKVMAL- 744
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL----GNLAALRTFRVLRALKTVAIVPGL 144
S + WN D I+++++ + + +L L LR RVL+ ++ + L
Sbjct: 745 ----SKDFFLCGWNIFDLIIVSVSLLDLIFELIEGLTVLRGLRLLRVLKLAQSWTTMKVL 800
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+I+ + I ++ NL V+++ ++ +FA++G+Q
Sbjct: 801 LSIIISTIGALGNLTFVLVIVIY---IFAVIGMQ 831
>gi|260528202|gb|ACX44803.1| putative voltage-gated sodium channel FPC2 alpha subunit
[Periplaneta americana]
Length = 1553
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 134/178 (75%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVV+K DIFRFS +LW LDPF PIRRVAI +V P+FS FI+ TIL +CI MIMP
Sbjct: 101 TFVVVTKAGDIFRFSGEKSLWTLDPFTPIRRVAISTMVQPIFSYFIMITILIHCIFMIMP 160
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
T T E++F IYT E VKV+ARGFIL F YLRD WNWLDF+V + Y+T+ +DL
Sbjct: 161 ATQTTYILELVFLSIYTIEVVVKVLARGFILHPFAYLRDPWNWLDFLVTLIGYITLVVDL 220
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
G+L ALR FRVLR+ +TV IVPG +TIV A+ S+ +L+D+++L +FSL VFA++GLQ
Sbjct: 221 GHLYALRAFRVLRSWRTVTIVPGWRTIVDALSLSITSLKDLVLLLLFSLFVFAVLGLQ 278
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 17 TDALWVLD---PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IE 66
TD L V D P+ ++ +++ P F LFI I+ N M + +
Sbjct: 493 TDFLCVWDCCVPWQKLQGAIGAVVLSPFFELFIAVIIVLNITFMALDHHDMNVEFERILR 552
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAA 125
+ IFT IY E+ +K++A L Y +D+WN DFI++ A + +G++ + L+
Sbjct: 553 TGNYIFTSIYIVEAVLKIIA----LSPKFYFKDSWNVFDFIIVVFAILELGLEGVQGLSV 608
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+FR+LR + P L + + +S +V+ + L +FA++G+Q
Sbjct: 609 FRSFRLLRVFRLAKFWPTLNNFMSVMTKSYGAFVNVMYVMFLLLFIFAIIGMQ 661
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 13 RFSATDALWVLDPFNPIRRVAIYILVHPLFSLFI-----ITTILTNCILMIMPGTPTIES 67
R S+ +W + IRRV + + F F+ IT++L + +P P + +
Sbjct: 834 RDSSVQRMW-----SNIRRVCFLLAKNKYFQKFVTAVLVITSVLLALEDIYLPQRPVLVN 888
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA---LAYVTMGIDL 120
+ + T + E + + A GF Y W WLDFIV+ L +V M +
Sbjct: 889 ITLYVDYVLTAFFVIEMIIMLFAVGFK----KYFTSKWYWLDFIVVVAYLLNFVLMCAGI 944
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
L LR RV R + ++ V G++ + ++E+V ++ +VI++ +F VFA+MG+Q
Sbjct: 945 EALQTLRLLRVFRLFRPLSKVNGMQVVTSTLVEAVPHIFNVILVGIFFWLVFAIMGVQLF 1004
Query: 181 RGK 183
GK
Sbjct: 1005 AGK 1007
>gi|7024453|dbj|BAA92154.1| voltage-gated sodium channel alpha subunit NaT/Scn11a [Mus
musculus]
Length = 1765
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 134/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSVFSMFIICTVIINCMFMANN 149
Query: 61 GT----PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 150 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 209
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 210 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 269
Query: 175 MGLQ 178
+G Q
Sbjct: 270 VGQQ 273
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIE----STEVIFTGIYTFES 80
R+ I+ H F FII IL + +I+ P P +E T+ IFT I+ E
Sbjct: 1025 RKTCYQIVKHSWFESFIIFVILLSSGALILEDVNLPSRPQVEKLLKCTDNIFTFIFLLEM 1084
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAI 140
+K +A GF Y AW WLDF+++ ++ +++ +L NL + R R LR L+ ++
Sbjct: 1085 ILKWVAFGFR----KYFTSAWCWLDFLIVVVSVLSL-TNLPNLKSFRNLRALRPLRALSQ 1139
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1140 FEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 560 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 620 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 675
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 676 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 718
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT-----IESTEVIFTGIYT 77
P N + ++ +F + I+ I+TN I+M+ G P + ++F I+T
Sbjct: 1332 PLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVQKIFDILNIVFVVIFT 1391
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA 134
E +KV F L Y + WN D +V+ L+ ++ G++ N+ FR++R
Sbjct: 1392 VECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTLFRIVRL 1446
Query: 135 ------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1447 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1495
>gi|5833120|gb|AAD53403.1|AF118044_1 voltage-gated sodium channel NaN [Mus musculus]
Length = 1765
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 134/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSVFSMFIICTVIINCMFMANN 149
Query: 61 GT----PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 150 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 209
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 210 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 269
Query: 175 MGLQ 178
+G Q
Sbjct: 270 VGQQ 273
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1024 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIFLLE 1083
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ +L NL + R R LR L+ ++
Sbjct: 1084 MILKWVAFGFR----KYFTSAWCWLDFLIVVVSVLSL-TNLPNLKSFRNLRALRPLRALS 1138
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1139 QFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 560 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 620 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 675
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 676 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 718
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT-----IESTEVIFTGIYT 77
P N + ++ +F + I+ I+TN I+M+ G P + ++F I+T
Sbjct: 1332 PLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFDILNIVFVVIFT 1391
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA 134
E +KV F L Y + WN D +V+ L+ ++ G++ N+ FR++R
Sbjct: 1392 VECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTLFRIVRL 1446
Query: 135 ------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1447 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMN 1496
>gi|148677258|gb|EDL09205.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_b [Mus
musculus]
Length = 1792
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 133/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR I I VH FS+FII T++ NC+ M
Sbjct: 117 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSFFSMFIICTVIINCMFMANN 176
Query: 61 GT----PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 177 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 236
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 237 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 296
Query: 175 MGLQ 178
+G Q
Sbjct: 297 VGQQ 300
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1051 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIFLLE 1110
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ +L NL + R R LR L+ ++
Sbjct: 1111 MILKWVAFGFR----KYFTSAWCWLDFLIVVVSVLSL-TNLPNLKSFRNLRALRPLRALS 1165
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1166 QFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1209
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 587 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 646
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 647 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 702
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 703 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 745
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT-----IESTEVIFTGIYT 77
P N + ++ +F + I+ I+TN I+M+ G P + ++F I+T
Sbjct: 1359 PLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFDILNIVFVVIFT 1418
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA 134
E +KV F L Y + WN D +V+ L+ ++ G++ N+ FR++R
Sbjct: 1419 VECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTLFRIVRL 1473
Query: 135 ------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1474 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMN 1523
>gi|133987591|ref|NP_036017.3| sodium channel protein type 11 subunit alpha [Mus musculus]
gi|341942013|sp|Q9R053.2|SCNBA_MOUSE RecName: Full=Sodium channel protein type 11 subunit alpha;
AltName: Full=NaN; AltName: Full=Sensory neuron sodium
channel 2; AltName: Full=Sodium channel protein type XI
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.9
Length = 1765
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 134/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSVFSMFIICTVIINCMFMANN 149
Query: 61 GT----PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 150 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 209
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 210 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 269
Query: 175 MGLQ 178
+G Q
Sbjct: 270 VGQQ 273
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1024 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIFLLE 1083
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ +L NL + R R LR L+ ++
Sbjct: 1084 MILKWVAFGFR----KYFTSAWCWLDFLIVVVSGLSL-TNLPNLKSFRNLRALRPLRALS 1138
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1139 QFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 560 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 620 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 675
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 676 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 718
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT-----IESTEVIFTGIYT 77
P N + ++ +F + I+ I+TN I+M+ G P + ++F I+T
Sbjct: 1332 PLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFDILNIVFVVIFT 1391
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA 134
E +KV F L Y + WN D +V+ L+ ++ G++ N+ FR++R
Sbjct: 1392 VECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTLFRIVRL 1446
Query: 135 ------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1447 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMN 1496
>gi|229442399|gb|AAI72856.1| sodium channel, voltage-gated, type XI, alpha [synthetic construct]
Length = 881
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 134/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSVFSMFIICTVIINCMFMANN 149
Query: 61 GT----PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 150 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 209
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 210 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 269
Query: 175 MGLQ 178
+G Q
Sbjct: 270 VGQQ 273
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 560 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 620 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 675
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 676 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 718
>gi|148677257|gb|EDL09204.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_a [Mus
musculus]
Length = 1765
Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 133/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR I I VH FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSFFSMFIICTVIINCMFMANN 149
Query: 61 GT----PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 150 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 209
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 210 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 269
Query: 175 MGLQ 178
+G Q
Sbjct: 270 VGQQ 273
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1024 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIFLLE 1083
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ +L NL + R R LR L+ ++
Sbjct: 1084 MILKWVAFGFR----KYFTSAWCWLDFLIVVVSVLSL-TNLPNLKSFRNLRALRPLRALS 1138
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1139 QFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 560 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 620 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 675
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 676 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 718
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT-----IESTEVIFTGIYT 77
P N + ++ +F + I+ I+TN I+M+ G P + ++F I+T
Sbjct: 1332 PLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFDILNIVFVVIFT 1391
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA 134
E +KV F L Y + WN D +V+ L+ ++ G++ N+ FR++R
Sbjct: 1392 VECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTLFRIVRL 1446
Query: 135 ------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1447 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMN 1496
>gi|395517042|ref|XP_003762691.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 11
subunit alpha [Sarcophilus harrisii]
Length = 1816
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 136/187 (72%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI-- 58
TF+V++K + I+RFSA AL++L PFN +RR+AIY+ VH LFS+FII T++ NC M
Sbjct: 93 TFMVLNKKRTIYRFSAKPALFILGPFNAVRRLAIYVSVHSLFSMFIICTVIVNCAFMAKN 152
Query: 59 --MPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
+ P E +FT IY+FE+ +K++ARG +L+ F+YLRD WNWLDF VI +A V+
Sbjct: 153 QNIDSPPARVLPEYVFTAIYSFEALIKILARGLLLDEFSYLRDPWNWLDFFVITVAXVSK 212
Query: 117 GIDLG-----NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
+ LG +++ALRTFRVLRALK ++++ GLK IVGA++ SVK L DV+IL +FSLS+
Sbjct: 213 FLSLGIKQLESVSALRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMILMVFSLSI 272
Query: 172 FALMGLQ 178
FAL+ Q
Sbjct: 273 FALVAQQ 279
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 20/169 (11%)
Query: 31 RVAIY-ILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFES 80
RV Y I+ H F FII IL + +I +P I+ + +FT I+ E
Sbjct: 1045 RVTCYRIIKHNWFESFIIFMILLSSGALIFEDCSLPSKKNIKELLSFADKVFTYIFILEM 1104
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG------NLAALRTFRVLRA 134
+K +A GF Y +AW +LDF+++ ++ +++ + N+ +LRT R LR
Sbjct: 1105 FLKWVAYGFK----KYFMNAWCFLDFVIVNVSLISLIAESAKSHLSINVKSLRTLRALRP 1160
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1161 LRALSQFEGMRVVVNALMGAIPAIFNVLLVCLIFWLIFCMLGVNLFAGK 1209
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 26/176 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PGTPTIESTEVI------FTG 74
P N + ++ + F +FIIT I N + M+ P P ++ + + F
Sbjct: 1361 PLNKCQAFVFDVVTNQAFDIFIITLICLNMVTMMAETDSPEGPNLQKAQFLETLNSFFVV 1420
Query: 75 IYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL-----------AYVTMGIDLGNL 123
I+T E +K+ F L F Y + WN D +V+ L + T+
Sbjct: 1421 IFTVECLLKI----FALRQF-YFANGWNLFDCVVVVLSVISLLISQLEKHKTIPFPPVLF 1475
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+R R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A++G+ +
Sbjct: 1476 RVIRLARIGRILRLVRAAKGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIIGMTN 1531
>gi|1066142|dbj|BAA07194.1| sodium channel alpha subunit [Takifugu rubripes]
Length = 530
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 131/179 (73%), Gaps = 17/179 (9%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRF+AT AL++L PFNP+RRVAI +LVH +FS+ I+ TILTNC M +
Sbjct: 90 TFIVLNRGKAIFRFNATPALYILKPFNPLRRVAIRVLVHSMFSMLIMFTILTNCAFMTLS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + F++L D WNWLDF VI +AY+T ++
Sbjct: 150 NPPEWAKNVEYTFTGIYTFESLIKILARGFCVGKFSFLWDPWNWLDFSVILMAYITEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALR LKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALR----------------LKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 252
>gi|442624679|ref|NP_001261172.1| Na channel protein 60E, isoform M [Drosophila melanogaster]
gi|440214627|gb|AGB93702.1| Na channel protein 60E, isoform M [Drosophila melanogaster]
Length = 2896
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 39.7 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 688 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 742
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 743 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 802
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 803 ISTIGALGNLTLILVIVIYIFAVIGMQ 829
>gi|359322553|ref|XP_542712.4| PREDICTED: sodium channel protein type 11 subunit alpha [Canis
lupus familiaris]
Length = 1771
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 136/188 (72%), Gaps = 10/188 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V++K + I+RFSA AL++L PFNPIR +AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSLAIKISVHSLFSMFIICTVIINCVFMATA 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++ E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI A+V+
Sbjct: 150 HGKDKNNTDTDNAEYVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIVTAFVS 209
Query: 116 MGID--LGN---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLS 170
+ L N +++LRTFRV RALK +++V GLK IVGA++ SVK L DV+ILT+F LS
Sbjct: 210 YSPNTILNNSISMSSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMILTLFCLS 269
Query: 171 VFALMGLQ 178
+FAL+G Q
Sbjct: 270 IFALVGQQ 277
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P I T+ IFT I+ E
Sbjct: 1029 LRKTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLEERPNIRDLLNCTDHIFTYIFILE 1088
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDFI++ ++ VT IDL +L + RT R LR L+ ++
Sbjct: 1089 MGLKWVAFGF----GKYFTSVWCWLDFIIVIVS-VTSLIDLKSLKSFRTLRALRPLRALS 1143
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1144 QFQGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1187
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++ ++ P L I I+ N + + M +S E ++FTGI+ E
Sbjct: 567 IKKALRTVMTDPFTELAITVCIIINTVFLAMEHYKMDQSFESILYTGNLVFTGIFMAEMC 626
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL--GNLAA--LRTFRVLRALKT 137
+K++A L+ + Y R WN D IV L++V + I++ G + RVLR K
Sbjct: 627 LKIIA----LDPYNYFRRGWNIFDSIVALLSFVDVMINIIVGKQCPRVFHSLRVLRVFKL 682
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 683 AKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 723
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P N + + ++ + +F + II I N + M+ +++T+ I F I+T
Sbjct: 1337 PLNKCQGLMYDLVTNQVFDVIIIILIFLNMLSMMAESENQLDTTKFILDRLNLAFVVIFT 1396
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAAL---------- 126
E +K+ F L + Y WN D +++ L+ V TM L N +
Sbjct: 1397 IECLIKI----FALRQY-YFTIGWNLFDCVIVVLSIVSTMVSALENQEHIPFPPTLFRIV 1451
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ V G++T++ A++ S+ +L ++ + L MF ++F +
Sbjct: 1452 RLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1502
>gi|386768614|ref|NP_726495.3| Na channel protein 60E, isoform G [Drosophila melanogaster]
gi|386768616|ref|NP_001189007.2| Na channel protein 60E, isoform H [Drosophila melanogaster]
gi|383302694|gb|AAF47291.6| Na channel protein 60E, isoform G [Drosophila melanogaster]
gi|383302695|gb|AAM70798.3| Na channel protein 60E, isoform H [Drosophila melanogaster]
Length = 2844
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 39.7 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 688 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 742
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 743 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 802
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 803 ISTIGALGNLTLILVIVIYIFAVIGMQ 829
>gi|343098410|tpg|DAA34936.1| TPA_inf: voltage-dependent sodium channel SCN7A/9A-like protein
[Anolis carolinensis]
Length = 1886
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 128/178 (71%), Gaps = 29/178 (16%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L++L PF+ +RR++I I VH
Sbjct: 92 TFIVLNKGKTIFRFSATPSLYLLSPFSILRRISIKIFVH--------------------- 130
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
FT IYTFES VK+ ARGF ++ FT+LRD WNWLDF+VI+ AY+T ++L
Sbjct: 131 --------SYTFTAIYTFESLVKIFARGFCIDDFTFLRDPWNWLDFLVISFAYITEFVNL 182
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 183 GNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 240
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT------ 64
++F+ T +W + +++V +I++ P L I I+ N + M + P+
Sbjct: 647 YKFAHTCLIWDCSSAWIEVKKVVYFIVMDPFVDLGITICIVANTVFMALEHYPSDKAFSD 706
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+++ ++FTGI+T E +K++A ++ + Y + WN D I+++L+ + +G+ ++
Sbjct: 707 VLKNGNLVFTGIFTAEMVLKIIA----MDPYYYFQVGWNIFDSIIVSLSLMELGLSNIDG 762
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 763 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 818
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T I E + +FT I+ E
Sbjct: 1085 LRKTCYRIVEHSWFETFIVFMILLSSGALAFEDIYIEQRKTIKIILEYADKVFTYIFILE 1144
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K ++ GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1145 MLLKWVSYGFQV----YFTNAWCWLDFLIVDVSIVSLIANALDYAELGPIKSLRTLRALR 1200
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G+K +V A+I ++ ++ +V+++ + +F++MG+
Sbjct: 1201 PLRALSRFEGMKVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVN 1245
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R A + + F + I++ I N
Sbjct: 1370 GQDIFMTEEQKKYYNAMKKLGNKKPQKPIPRPANKVQGFIFDFVTRQAFDIGIMSLICLN 1429
Query: 54 CILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ ES + VIF ++T E +K++A + Y WN DF
Sbjct: 1430 MVTMMVETDDEDESKKKILYWINVIFIILFTGEFLLKLIAL-----RYYYFTIGWNIFDF 1484
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+++ G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1485 VVVILSFI--GMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1542
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+
Sbjct: 1543 PALFNIGLLLFLVMFIYAIFGMSQ 1566
>gi|386768622|ref|NP_001246509.1| Na channel protein 60E, isoform K [Drosophila melanogaster]
gi|383302698|gb|AFH08262.1| Na channel protein 60E, isoform K [Drosophila melanogaster]
Length = 2833
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 39.7 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 688 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 742
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 743 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 802
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 803 ISTIGALGNLTLILVIVIYIFAVIGMQ 829
>gi|386768620|ref|NP_001246508.1| Na channel protein 60E, isoform J [Drosophila melanogaster]
gi|383302697|gb|AFH08261.1| Na channel protein 60E, isoform J [Drosophila melanogaster]
Length = 2806
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 39.7 bits (91), Expect = 0.53, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 688 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 742
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 743 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 802
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 803 ISTIGALGNLTLILVIVIYIFAVIGMQ 829
>gi|166215092|sp|Q9W0Y8.5|SCN60_DROME RecName: Full=Sodium channel protein 60E; AltName: Full=Drosophila
ion channel 60; AltName: Full=Drosophila sodium channel
1; AltName: Full=Protein smell-impaired 60E; AltName:
Full=Sodium channel 2; Short=DmNav2
Length = 2821
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 39.7 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 688 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 742
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 743 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 802
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 803 ISTIGALGNLTLILVIVIYIFAVIGMQ 829
>gi|405954000|gb|EKC21550.1| Sodium channel protein type 5 subunit alpha [Crassostrea gigas]
Length = 1986
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 17/195 (8%)
Query: 1 TFVVVS---KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TFV ++ K I RF AT AL +L P+NP+R++++YI + F +I TIL NC+ +
Sbjct: 143 TFVAIAPRFSNKYIHRFHATKALGLLTPWNPVRKLSVYIATNQFFDYLVILTILCNCVFL 202
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
MP P E+ E +F GIYT E VK++ARG I+ FTYLRD WNWLDFIVI AY+T+
Sbjct: 203 AMPDDPASETAEYVFLGIYTMECVVKILARGLIINKFTYLRDPWNWLDFIVIISAYITIV 262
Query: 118 IDLG--------------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
ID+ N LRTFRVLRALKTV+IVPGLKTIVGA++ + K L +VII
Sbjct: 263 IDMTSTPSAEGEEDGSVFNPQMLRTFRVLRALKTVSIVPGLKTIVGALLRAFKLLFEVII 322
Query: 164 LTMFSLSVFALMGLQ 178
LT F L +FAL GLQ
Sbjct: 323 LTTFCLMIFALFGLQ 337
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 34 IYILV-HPLFSLFIITTILTNCILM-----IMPGTPTIEST--EVIFTGIYTFESAVKVM 85
++ILV PLF LFI IL N I M MP +T +FT I+T E+ +K+
Sbjct: 731 VFILVSDPLFDLFITFCILINTIFMGIEYHNMPQGLVDATTWANFVFTIIFTLEAVLKLC 790
Query: 86 ARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGL 144
A G Y + WN D +++ +++ G+ D+ + +RTFR+LR K +
Sbjct: 791 AFGKF-----YFSNGWNNFDLVIVVASWLDFGLSDVEGVNVIRTFRLLRVFKLAQAWRTM 845
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ ++ ++ ++ L ++ ++ + + +FA++GLQ
Sbjct: 846 RVLLSIIMNTLGALGNLTVILVIIIYIFAVIGLQ 879
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTIES----TEVIFTGIY 76
+N R I+ H F FI+ I + + + P +E+ T +IF ++
Sbjct: 1152 WNKFRFFMCKIVEHKAFEYFILVCIGLSSMSLAFEDVYLYTRPELEAALYYTNIIFAVLF 1211
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDF--IVIALAYV----TMGIDLGNLAALRTFR 130
T E +K +A GF Y W LDF +VI+LA + T G D+ +LRT R
Sbjct: 1212 TVEMLMKWVALGFK----KYFTSFWTILDFAIVVISLASLIADATGGEDISAFRSLRTLR 1267
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R L+ ++ ++ +V A++ ++ + +V+++ M +F++MG+Q
Sbjct: 1268 AFRPLRAISRWQSMRIVVNALMLAIPAILNVLVVCMVFWLIFSIMGVQ 1315
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYT 77
P I+ V + V F L I+ I N I M + + ++ ++FT I+T
Sbjct: 1474 PKAAIQAVFYDVSVSSKFDLCIVIVIFLNMIAMAVDHYKMTDYVSNILDILNILFTTIFT 1533
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA----------LR 127
E +K++ Y R WN DF+V+ L+ +GI L ++ A LR
Sbjct: 1534 LECVIKIIGL-----RHHYFRQPWNVFDFVVVVLSL--LGIVLADVLANSFNPTLLRVLR 1586
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
FR+ R L+ + G++ ++ A+I S+ L ++ L + ++A++G+
Sbjct: 1587 VFRIGRVLRLIKAAKGIRKLLFALIISLPALINIGALLCLIMYIYAIIGM 1636
>gi|410971688|ref|XP_003992297.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 11
subunit alpha [Felis catus]
Length = 1784
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 135/187 (72%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL+V PFNPIR +AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSANRALFVFGPFNPIRSLAIRISVHSLFSMFIICTVIINCVFMATA 149
Query: 61 GTPT-----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++ E +FTGIY FE+ +K++ARGF+L+ F++LRD WNWLD IVIA A+V+
Sbjct: 150 CGKDNSNIYTDNAEYVFTGIYIFEALIKILARGFVLDEFSFLRDPWNWLDSIVIATAFVS 209
Query: 116 MGIDLG----NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
+ +L++LRTFRV RALK +++V GLK IVGA++ SVK L DV+ILT+F LS+
Sbjct: 210 YSPSIRASGISLSSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMILTLFCLSI 269
Query: 172 FALMGLQ 178
FAL+G Q
Sbjct: 270 FALVGQQ 276
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F F+I IL + ++ + P I++ T+ IFT I+ E
Sbjct: 1042 LRKTCYQIVKHSWFESFVIFVILLSSGALVFEDIHLEKRPNIQALLNCTDHIFTYIFILE 1101
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDFI++ ++ VT IDL +L + RT R LR L+ ++
Sbjct: 1102 MGLKWVAFGF----GKYFTSVWCWLDFIIVIVS-VTSLIDLKSLKSFRTLRALRPLRALS 1156
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1157 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1200
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++ ++ P L I I+ N + + + +S E ++FTGI+ E
Sbjct: 566 IKKALRVVMTDPFTELVITICIVINTVFLALEHYKMDQSFEYMLYTGNLVFTGIFMAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY--VTMGIDLGNLAAL--RTFRVLRALKT 137
+K++A L+ + Y R WN D IV L++ V + +G + L + RVLR K
Sbjct: 626 LKIIA----LDPYNYFRRGWNIFDSIVALLSFADVMNSVVVGKQSPLFFHSLRVLRVFKL 681
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 682 AKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 722
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P N + +A ++ + +F + II I N ++M+ E T+ I F I+T
Sbjct: 1350 PLNKCQGLAFDLVTNQVFDVIIIILIFLNMVIMMAESNNHPEDTKAILEELNLAFVVIFT 1409
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAAL---------- 126
E +K+ F L + Y + WN D +++ L+ V+ + L N +
Sbjct: 1410 IECLIKI----FALRQY-YFTNGWNLFDCVIVVLSIVSAMVSALENQQHIPFPPTLFRVV 1464
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R R+ R L+ V G++T++ A++ S+ +L ++ + L MF ++F +
Sbjct: 1465 RLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1515
>gi|195149447|ref|XP_002015669.1| GL11199 [Drosophila persimilis]
gi|194109516|gb|EDW31559.1| GL11199 [Drosophila persimilis]
Length = 1219
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 90 TFCVVSKRFRKNYIHRFTGTKSLFLFHPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 149
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 150 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 207
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 208 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 267
Query: 178 QDSRGK 183
Q G+
Sbjct: 268 QVYMGE 273
Score = 39.3 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 566 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 620
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 621 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 680
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 681 ISTIGALGNLTLILVIVIYIFAVIGMQ 707
>gi|386768624|ref|NP_001246510.1| Na channel protein 60E, isoform L [Drosophila melanogaster]
gi|383302699|gb|AFH08263.1| Na channel protein 60E, isoform L [Drosophila melanogaster]
Length = 2608
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 39.7 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 688 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 742
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 743 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 802
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 803 ISTIGALGNLTLILVIVIYIFAVIGMQ 829
>gi|198456218|ref|XP_002138202.1| GA24638 [Drosophila pseudoobscura pseudoobscura]
gi|198135536|gb|EDY68760.1| GA24638 [Drosophila pseudoobscura pseudoobscura]
Length = 2473
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 90 TFCVVSKRFRKNYIHRFTGTKSLFLFHPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 149
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 150 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 207
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 208 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 267
Query: 178 QDSRGK 183
Q G+
Sbjct: 268 QVYMGE 273
Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 694 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 748
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 749 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 808
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 809 ISTIGALGNLTLILVIVIYIFAVIGMQ 835
>gi|345328066|ref|XP_003431231.1| PREDICTED: sodium channel protein type 1 subunit alpha-like
[Ornithorhynchus anatinus]
Length = 1949
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
Query: 28 PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMA 86
P+ + Y + LFS+ I+ TILTNC+ M M P ++ E FTGIYTFES +K+ A
Sbjct: 74 PLEDLDPYYVNKKLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIFA 133
Query: 87 RGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKT 146
RGF ++ FT+LRD WNWLDF VI AYVT +DLGN++ALRTFRVLRALKT++++PGLKT
Sbjct: 134 RGFCIDDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKT 193
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
IVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 194 IVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 225
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-TE 69
++FS +W P+ I+ + ++ P L I I+ N + M M P E TE
Sbjct: 683 YKFSNIFLIWDCSPYWIQIKNIVNIFVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFTE 742
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+ E +K++A+ + + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 743 VLSVGNLVFTGIFAAEMFLKIIAK----DPYYYFQEGWNIFDSFIVTLSLVELGLADVEG 798
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 799 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTVVLAIIVFIFAVVGMQ 854
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRKTCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGYQ----AYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALLGAIPSIINVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|342837667|tpg|DAA34923.1| TPA_inf: voltage-dependent sodium channel SCN1A [Ornithorhynchus
anatinus]
Length = 1945
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
Query: 28 PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMA 86
P+ + Y + LFS+ I+ TILTNC+ M M P ++ E FTGIYTFES +K+ A
Sbjct: 74 PLEDLDPYYVNKKLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIFA 133
Query: 87 RGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKT 146
RGF ++ FT+LRD WNWLDF VI AYVT +DLGN++ALRTFRVLRALKT++++PGLKT
Sbjct: 134 RGFCIDDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKT 193
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
IVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 194 IVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 225
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-TE 69
++FS +W P+ I+ + ++ P L I I+ N + M M P E TE
Sbjct: 683 YKFSNIFLIWDCSPYWIQIKNIVNIFVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFTE 742
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+ E +K++A+ + + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 743 VLSVGNLVFTGIFAAEMFLKIIAK----DPYYYFQEGWNIFDSFIVTLSLVELGLADVEG 798
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 799 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTVVLAIIVFIFAVVGMQ 854
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1147 LRKTCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1206
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1207 MLLKWVAYGYQ----AYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1262
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1263 PLRALSRFEGMRVVVNALLGAIPSIINVLLVCLIFWLIFSIMGVNLFAGK 1312
>gi|426249797|ref|XP_004018635.1| PREDICTED: sodium channel protein type 11 subunit alpha [Ovis
aries]
Length = 1777
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 136/187 (72%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFN IR +AI I VH LFS+FII T++ NC+ M +
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNSIRSLAIRISVHSLFSMFIICTVIINCVFMALA 149
Query: 61 GTP-----TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+++ E +F GIY FE+ VK++ARGFIL+ F++LRD WNWLD IVIA A+V+
Sbjct: 150 HQKGGISVNVDNAEYVFLGIYLFEALVKILARGFILDEFSFLRDPWNWLDSIVIATAFVS 209
Query: 116 MGIDLG----NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
+ +L++LRTFRV RALK ++++ GLK IVGA++ SVK L DV+ILT+F LS+
Sbjct: 210 YSPYINASSFSLSSLRTFRVFRALKAISVISGLKVIVGALLHSVKKLVDVMILTLFCLSI 269
Query: 172 FALMGLQ 178
FAL+G Q
Sbjct: 270 FALVGQQ 276
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P I+ T+ IFT I+ E
Sbjct: 1036 LRKTCYQIVKHSWFESFIIFVILLSSGALVFEDINLDKQPKIQELLKCTDTIFTYIFILE 1095
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDF+++ ++ VT IDL L + R R LR L+ ++
Sbjct: 1096 MGLKWVAFGF----GKYFTSVWCWLDFVIVIVS-VTSLIDLMGLKSFRILRALRPLRALS 1150
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G+K +V A+I ++ + +V+++ + +F ++G+
Sbjct: 1151 QFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGV 1188
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFT 73
W LD I++V ++ P L I I+ N + + M ++ E ++FT
Sbjct: 560 WWLD----IKKVLRTVMTDPFTELAITICIIINTVFLAMEHYKMDQNFENILYTGNLVFT 615
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMG--IDLGNLAALRTF 129
GI+ E +K++A L+ + Y R WN D +V ++LA V + + + + R+
Sbjct: 616 GIFMAEMCLKIIA----LDPYHYFRRGWNIFDSVVALLSLADVIVNHIVSGKSWISFRSL 671
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLR K P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 672 RVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 720
>gi|301789269|ref|XP_002930051.1| PREDICTED: sodium channel protein type 11 subunit alpha-like
[Ailuropoda melanoleuca]
Length = 1770
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 135/187 (72%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR +AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSLAIKISVHSLFSMFIICTVIINCVFMASA 149
Query: 61 -----GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++ E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI A+ T
Sbjct: 150 FGKENNNIDTDNAEYVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIVTAFAT 209
Query: 116 MGIDLG----NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
++ +L++LRTFRV RALK +++V GLK IVGA++ SVK L DV+ILT+F LS+
Sbjct: 210 YVPEVRESGFSLSSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMILTLFCLSI 269
Query: 172 FALMGLQ 178
FAL+G Q
Sbjct: 270 FALVGQQ 276
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P I++ T+ IFT I+ E
Sbjct: 1028 LRKTCYQIVKHSWFESFIIFVILLSSGALVFEDVHLEKRPNIQALLNCTDHIFTYIFILE 1087
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDFI++ ++ VT IDL +L + RT R LR L+T++
Sbjct: 1088 MGLKWVAFGF----GKYFTSVWCWLDFIIVIVS-VTSLIDLKSLKSFRTLRALRPLRTLS 1142
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1143 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1186
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY--VTMGIDLGNLAAL- 126
++F GI+ E +K++A L+ + Y R WN D IV L++ V I +G + L
Sbjct: 614 LVFAGIFMAEMCLKIIA----LDPYNYFRRGWNIFDSIVALLSFADVMNSIVVGKKSLLF 669
Query: 127 -RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R RVLR K P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 670 FRPLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 722
>gi|344244728|gb|EGW00832.1| Sodium channel protein type 5 subunit alpha [Cricetulus griseus]
Length = 1929
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 126/179 (70%), Gaps = 24/179 (13%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+A +FI+ TILTNC+ M
Sbjct: 139 TFIVLNKGKTIFRFSATNAF-----------------------MFIMCTILTNCVFMAQH 175
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 176 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 235
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 236 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 294
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 653 RFAQRYLIWECCPLWMSIKQKVKFLVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 712
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 713 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 768
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 769 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 823
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1107 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERQTIKVLLEYADKMFTYVFVLE 1166
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1167 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1222
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1223 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1272
>gi|1947094|gb|AAC63049.1| voltage-gated sodium channel homolog BdNa1 [Bdelloura candida]
Length = 1699
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 132/183 (72%), Gaps = 3/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
+FVV++K K+I+RF+ T A ++ PFNP+R AI IL HPLFS+ ++ TI+TNCI+M +
Sbjct: 96 SFVVINKSKNIYRFTTTKAFFLFSPFNPVRTSAIKILTHPLFSIVVLLTIITNCIIMAL- 154
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGID 119
I++ E FT IY E VK ARG I+ FTYLR WNWLDF+VI LAY+ + D
Sbjct: 155 -NLDIKALEQSFTIIYAAEFLVKAFARGLIINDFTYLRSIWNWLDFLVIGLAYLMFIEPD 213
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
LGN ++LRT RV RALKTV I+PG+ T+V A++ SV L+D I+LT+F L++FAL+GLQ
Sbjct: 214 LGNYSSLRTLRVFRALKTVTILPGMTTVVNALLNSVIKLKDAIVLTLFMLAIFALIGLQL 273
Query: 180 SRG 182
+G
Sbjct: 274 YKG 276
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIEST----EVIFTGIYTFE 79
IR + ++ H F FI+ I + + M +P P +E+T + +FT ++ E
Sbjct: 975 IRCLTFKVVDHKYFETFILFMIAFSSLTMTLEDKYLPNYPMLENTIYILDKVFTIVFLME 1034
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGN---LAALRTFRVLRAL 135
+K MA G + Y +D W+ LDF ++ +A ++ M D+ L A+RT R LR L
Sbjct: 1035 MLLKWMAIGL----YKYFKDPWSCLDFAIVMIALISLMPFDMSRYDALKAMRTLRALRPL 1090
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ ++ G++ +V A+I+++ ++ +V+++ + +F+++G+Q G+
Sbjct: 1091 RAISRWEGMRIVVNALIQAIPSIFNVMVVCLVFWLIFSIIGVQRFGGR 1138
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFT-------GIYTFESAV 82
++ +I++ P LFI I+ N M + G T ES ++ F G++TFE+
Sbjct: 587 QKCVSFIILDPFLELFITLCIVCNTCFMALEGPFTEESVKIFFRHSNYFFMGVFTFEAIG 646
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRAL---KTVA 139
K +A G TY + WN DFIV+ ++ + + G ++ LR FR+LR K+
Sbjct: 647 KQIALGLK----TYFSERWNVFDFIVVIISLLELSRPNGVMSILRAFRLLRVFKLAKSWQ 702
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ L TI+G + ++ NL V+ + +F +FA++G+
Sbjct: 703 TMNLLFTIIGHTVGAIGNLCIVLGIIVF---IFAVLGMN 738
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 17/145 (11%)
Query: 45 FIITTILTNCI-LMIMPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
FI+ LT CI P T ++ +F I+ E +K++ GF + Y +D W
Sbjct: 1316 FIVLNTLTMCIEFQDQPKLLTRVLDIVGRVFLLIFAGEFIMKLI--GF---RWFYFKDPW 1370
Query: 102 NWLDFIVIALAYVT---------MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVI 152
N DF V+ + + +D + +R FR+ R L+ V G++T++ +++
Sbjct: 1371 NVFDFSVVVFSTIAWILQFFESIFPLDPTLIRIVRLFRITRVLRLVKSARGIRTLLFSLV 1430
Query: 153 ESVKNLRDVIILTMFSLSVFALMGL 177
S+ L ++ +L M + ++A+MGL
Sbjct: 1431 VSLPALFNIALLLMLVMFIYAIMGL 1455
>gi|328703283|ref|XP_001944868.2| PREDICTED: sodium channel protein 60E-like [Acyrthosiphon pisum]
Length = 590
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 128/186 (68%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT + ++ P+N R++ IYI + +F ++TTIL NC+ +
Sbjct: 93 TFCVVSKRFRKNYIHRFTATQSFFMFSPWNSFRQLCIYISTNQIFDYVVMTTILLNCVFL 152
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
T ++E E IF IYT E +K +++GFIL +TYLR+ WNWLDFIVI Y T+G
Sbjct: 153 --AKTDSVEEAEYIFLAIYTAEMVIKTISKGFILNKYTYLRNPWNWLDFIVITSGYATIG 210
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+D+GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 211 MDVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 270
Query: 178 QDSRGK 183
Q G+
Sbjct: 271 QVYMGE 276
>gi|348531852|ref|XP_003453422.1| PREDICTED: sodium channel protein type 4 subunit alpha A-like
[Oreochromis niloticus]
Length = 1850
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 126/158 (79%), Gaps = 2/158 (1%)
Query: 23 LDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPTIEST-EVIFTGIYTFES 80
+DPF ++ I I + +FS+FI+ TIL+NC+ M M P T E +FTGIYTFE+
Sbjct: 77 IDPFYETQKTFIVITKGNTIFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEA 136
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAI 140
VKV++RGF + SFT+LRD WNWLDF+VI++AYVT +DLGN++ALRTFRVLRALKT+ +
Sbjct: 137 TVKVLSRGFCVGSFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITV 196
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+PGLKTIV A+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 197 IPGLKTIVAALIQSVKKMGDVMILTVFALAVFALVGLQ 234
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1011 LRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIEKRRTIKIILEYADKIFTYIFIIE 1070
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF T+ +AW WLDF ++ ++ ++ MG DLG + +LRT R LR
Sbjct: 1071 MLLKWVAYGFK----TFFTNAWCWLDFFIVDISLISLVANWMGYSDLGPIKSLRTLRALR 1126
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1127 PLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1176
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTP 63
K D+F A WV+ ++ ++++ P L I I+ N + M M P TP
Sbjct: 543 KFADLFLKWDCCAPWVV-----FKKWVYFVVMDPFVDLAITICIVLNTLFMAMEHYPMTP 597
Query: 64 TIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI- 118
+ ++FTGI+T E K++A ++ + Y + WN D I++ L+ V +G+
Sbjct: 598 EFDYMLSVGNLVFTGIFTAEMVFKLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLA 653
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 654 NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 713
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F +FI+ I N + M++ E V F ++T
Sbjct: 1329 PTNLIQGIVFDFISQQFFDIFIMVLICLNMVSMMVETDDQSAEKEDFLFKLNVAFIVVFT 1388
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN--------LAALRT 128
E +KV F L + Y + WN DF+V+ L+ TM DL +R
Sbjct: 1389 GECVLKV----FALRQY-YFTNGWNIFDFVVVILSIAGTMLSDLIEKYFVSPTLFRVIRL 1443
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R+ R L+ + G++T++ A++ S+ L ++ +L ++ +F++ G+ +
Sbjct: 1444 ARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLNMFIFSIFGMSN 1494
>gi|297488439|ref|XP_002696965.1| PREDICTED: sodium channel protein type 11 subunit alpha [Bos
taurus]
gi|358418086|ref|XP_003583836.1| PREDICTED: sodium channel protein type 11 subunit alpha [Bos
taurus]
gi|296475122|tpg|DAA17237.1| TPA: sodium channel protein type 11 subunit alpha-like [Bos taurus]
Length = 1783
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 134/187 (71%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFN IR +AI I VH LFS+FII T++ NC+ M +
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNSIRSLAIRISVHSLFSMFIICTVIINCVFMALA 149
Query: 61 GTPT-----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +F GIY FE+ VK++ARGFIL+ F++LRD WNWLD IVIA A+V+
Sbjct: 150 HQKSSIDVKTDHAEYVFLGIYLFEALVKILARGFILDEFSFLRDPWNWLDSIVIATAFVS 209
Query: 116 MGIDLGN----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
+ + L++LRTFRV RALK ++++ GLK IVGA++ SVK L DV+IL +F LS+
Sbjct: 210 YSPYINDSSFSLSSLRTFRVFRALKAISVISGLKVIVGALLHSVKKLVDVMILALFCLSI 269
Query: 172 FALMGLQ 178
FAL+G Q
Sbjct: 270 FALVGQQ 276
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R++ I+ H F FII IL + ++ + P I+ T+ IFT I+ E
Sbjct: 1041 LRKICYQIVKHSWFESFIIFVILLSSGALVFEDINLDKQPKIQELLKCTDTIFTYIFILE 1100
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDF+++ ++ VT IDL L + R R LR L+ ++
Sbjct: 1101 MGLKWVAFGFR----KYFTSVWCWLDFVIVIVS-VTSLIDLMGLKSFRILRALRPLRALS 1155
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G+K +V A+I ++ + +V+++ + +F ++G+
Sbjct: 1156 QFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGV 1193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 19/169 (11%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFT 73
W LD I++V ++ P L I I+ N + + M ++ E ++FT
Sbjct: 564 WWLD----IKKVLRTVMTDPFTELAITICIIINTVFLAMEHYKMDQNFENILYTGNLVFT 619
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMG--IDLGNLAALRTF 129
GI+ E +K++A L+ + Y R WN D +V ++LA V + + + + R+
Sbjct: 620 GIFMAEMCLKIIA----LDPYHYFRRGWNIFDSVVALLSLADVILNHIVSGKSWISFRSL 675
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLR K P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 676 RVLRVFKLAKSWPTLSTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 724
>gi|395843498|ref|XP_003794518.1| PREDICTED: sodium channel protein type 11 subunit alpha [Otolemur
garnettii]
Length = 1770
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 133/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++ PFN IR AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFIFGPFNSIRSFAIRISVHSLFSMFIICTVIINCVFMARC 149
Query: 61 GTPTIESTEV-----IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
G+ STE +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI A V+
Sbjct: 150 GSKDNNSTETHSAEFVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGTAIVS 209
Query: 116 MGIDLG-NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+ NL++LR+FRVLRALK +++V GLK IVGA++ SVK L +V+ILT+F LS+FAL
Sbjct: 210 YFPSIRINLSSLRSFRVLRALKAISVVSGLKVIVGALLRSVKKLVNVMILTLFCLSIFAL 269
Query: 175 MGLQ 178
+ Q
Sbjct: 270 IAQQ 273
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P IE+ T+ IFT I+ E
Sbjct: 1033 LRKTCYQIVKHSWFESFIIFVILLSSGTLVFEDVYLKERPQIEALLNCTDKIFTHIFILE 1092
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDFI++ ++ ++ IDL L + RT R LR L+ ++
Sbjct: 1093 MGLKWVAFGFT----KYFTSAWCWLDFIIVIVSVPSL-IDLKGLRSFRTLRALRPLRALS 1147
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1148 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1191
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++V ++ P L I I+ N + + M S E ++FTGI+ E
Sbjct: 566 IKKVLRTVMTDPFTELAITICIIINTVFLAMEHDNMDNSFENILNTGNMVFTGIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---LRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVAVLSFADVMTNKSSKPRWQFLRSFRVLRIFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIAHSVGALGNLTVVLAIVIFIFSVVGMQ 721
>gi|321478364|gb|EFX89321.1| putative voltage-gated sodium channel protein [Daphnia pulex]
Length = 1527
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 134/191 (70%), Gaps = 5/191 (2%)
Query: 1 TFVVVS---KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TFVVVS + I RFSA+ + ++ P+NP+RR+AIY+ HP F ++TTIL NCI +
Sbjct: 34 TFVVVSNRFRKNYIHRFSASRSCFLFSPWNPLRRIAIYLSTHPYFDYVVMTTILLNCIFL 93
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T +E E +F GIY+ E +K +A+G +L+ TYLR WNWLDF+VI Y T+
Sbjct: 94 AM--TEPVEQAEYVFLGIYSCEMVIKAVAKGLVLDRLTYLRSPWNWLDFVVILSGYATLA 151
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGL+TI+ A++++++ L +V++L +F LSV AL L
Sbjct: 152 VEIGNLAGLRTFRVLRALKTVSIIPGLRTIINALLKAMRQLMEVMMLIVFCLSVLALFAL 211
Query: 178 QDSRGKKSDES 188
Q G+ ++
Sbjct: 212 QVFMGELRNKC 222
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-LAALRTF 129
+FT ++T E +K+ A G + R+ WN DF+++ + V +G+++ N L+ LR
Sbjct: 532 VFTSVFTTECILKMGATGT-----DFFRNGWNVFDFVIVLASLVDLGLEIVNGLSVLRGM 586
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R++R L+ ++ ++ ++ S+ L ++ + + +FA++G+Q
Sbjct: 587 RLMRVLRLAQSWTTMRVLLSIILSSLGALANLTFVLAIVVYIFAVIGMQ 635
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFES 80
R + ++ HP F I+ I + I + + P + S T + F ++ E
Sbjct: 810 RTALLQVVKHPAFEWSILILIFGSSITLCFEDIYLEENPYLMSILRWTNMAFAILFALEM 869
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALR---TFRVLRALK 136
+K A G Y W LDF+++ ++ +++ + D NL+ALR T R LR L+
Sbjct: 870 IIKWFALGLKY----YFSSVWTALDFVIVTVSVISVAVEDSANLSALRSLRTLRALRPLR 925
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ G+K +V A++ ++ + +V+++ + VF+++G+Q GK
Sbjct: 926 AISRWQGMKIVVNALMFAIPAIFNVLLVCLVFWLVFSILGVQLFGGK 972
>gi|328793203|ref|XP_395121.4| PREDICTED: sodium channel protein 60E-like [Apis mellifera]
Length = 2525
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ ++ P+NPIRR IY+ + F ++ TI+ NC +
Sbjct: 468 TFCVVSKRFRKNYIHRFTATNSWFIFSPWNPIRRYCIYLSTNQYFDYVVMATIILNCAFL 527
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T TIE E IF IYT E +K +A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 528 AM--TETIEEAEYIFLAIYTAEMVIKSIAKGFVLNKYTYLRNPWNWLDFVVITSGYATIG 585
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 586 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 645
Query: 178 Q 178
Q
Sbjct: 646 Q 646
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
++ PLF L I I+ N + M ES +FT I+TFE +K++A
Sbjct: 1058 VVRDPLFELTITLCIVLNTGFLAMEHHGMSESIRQALNIGNKVFTSIFTFECLLKLLAL- 1116
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTI 147
S + + WN D I+++ + + + +L L+ +R R+LR LK +K +
Sbjct: 1117 ----SKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVL 1172
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ +I ++ L ++ ++ + + +FA++G+Q
Sbjct: 1173 LSIIISTIGALGNLTLVLVIVIYIFAVIGMQ 1203
>gi|380027833|ref|XP_003697620.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein 60E-like
[Apis florea]
Length = 2455
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ ++ P+NPIRR IY+ + F ++ TI+ NC +
Sbjct: 443 TFCVVSKRFRKNYIHRFTATNSWFIFSPWNPIRRYCIYLSTNQYFDYVVMATIILNCAFL 502
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T TIE E IF IYT E +K +A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 503 AM--TETIEEAEYIFLAIYTAEMVIKSIAKGFVLNKYTYLRNPWNWLDFVVITSGYATIG 560
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 561 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 620
Query: 178 Q 178
Q
Sbjct: 621 Q 621
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
++ PLF L I I+ N + M ES +FT I+TFE +K++A
Sbjct: 1030 VVRDPLFELTITLCIVLNTGFLAMEHHGMSESIRQALNIGNKVFTSIFTFECLLKLLAL- 1088
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTI 147
S + + WN D I+++ + + + +L L+ +R R+LR LK +K +
Sbjct: 1089 ----SKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVL 1144
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ +I ++ L ++ ++ + + +FA++G+Q
Sbjct: 1145 LSIIISTIGALGNLTLVLVIVIYIFAVIGMQ 1175
>gi|194756288|ref|XP_001960411.1| GF13350 [Drosophila ananassae]
gi|190621709|gb|EDV37233.1| GF13350 [Drosophila ananassae]
Length = 2316
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 74 TFCVVSKRFRKNYIHRFTGTKSLFLFHPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 133
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 134 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 191
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 192 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 251
Query: 178 Q 178
Q
Sbjct: 252 Q 252
>gi|317419626|emb|CBN81663.1| Sodium channel protein type 4 subunit alpha A [Dicentrarchus
labrax]
Length = 1855
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 125/158 (79%), Gaps = 2/158 (1%)
Query: 23 LDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPTIEST-EVIFTGIYTFES 80
LDPF ++ I I + +FS+FI+ TIL NC+ M M P T E +FTGIYTFE+
Sbjct: 77 LDPFYKAQKTFIVITKGNTIFSMFIMITILANCVFMTMSNPPAWSKTVEYVFTGIYTFEA 136
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAI 140
VKV++RGF + SFT+LRD WNWLDF+VI++AY+T +DLGN++ALRTFRVLRALKT+ +
Sbjct: 137 TVKVLSRGFCVGSFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITV 196
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+PGLKTIV A+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 197 IPGLKTIVAALIQSVKKMVDVMILTVFALAVFALVGLQ 234
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1015 LRRTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTIKIILEYADKVFTYIFIIE 1074
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ ++ MG +LG + +LRT R LR
Sbjct: 1075 MLLKWVAYGFK----TYFTNAWCWLDFFIVDISLISLCANWMGYSELGPIKSLRTLRALR 1130
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + F++MG+ GK
Sbjct: 1131 PLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLTFSIMGVNLFAGK 1180
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIEST----EVIFTGIYTFESAV 82
++ +++++ P L I I+ N + M M P TP + ++FTGI+T E
Sbjct: 562 KKWVLFVVMDPFVDLAITICIVLNTLFMAMEHYPMTPEFDYMLSVGNLVFTGIFTAEMFF 621
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIV 141
K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 622 KLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSW 677
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 678 PTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
>gi|195401751|ref|XP_002059475.1| GJ18955 [Drosophila virilis]
gi|194142481|gb|EDW58887.1| GJ18955 [Drosophila virilis]
Length = 1908
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 93/186 (50%), Positives = 128/186 (68%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++ RRV +YI + F ++ TIL NCI +
Sbjct: 74 TFCVVSKRFRKNYIHRFTGTKSLFLFHPWSQWRRVCVYIATNQFFDYCVMATILFNCIFL 133
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 134 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 191
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 192 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 251
Query: 178 QDSRGK 183
Q G+
Sbjct: 252 QVYMGE 257
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 557 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 611
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D I++ + + + +L + ++ L + +A +K ++ +
Sbjct: 612 SKEFFLCGWNIFDLIIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 671
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 672 ISTIGALGNLTLILVIVIYIFAVIGMQ 698
>gi|242008757|ref|XP_002425167.1| sodium channel protein type 2 subunit alpha, putative [Pediculus
humanus corporis]
gi|212508861|gb|EEB12429.1| sodium channel protein type 2 subunit alpha, putative [Pediculus
humanus corporis]
Length = 2203
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT + ++ P+NP+R+ I++ + LF ++TTIL NC+ +
Sbjct: 102 TFCVVSKRFRKNYIHRFAATRSFFIFSPWNPVRQTCIFLSTNQLFDYVVMTTILLNCVFL 161
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T +E E +F IYT E +K +A+GFIL +TYLR+ WNWLDF+VI Y T+G
Sbjct: 162 AM--TEPVEEAEFVFLAIYTAEMIIKAIAKGFILNKYTYLRNPWNWLDFVVITSGYATIG 219
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 220 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 279
Query: 178 Q 178
Q
Sbjct: 280 Q 280
>gi|195029359|ref|XP_001987541.1| GH19909 [Drosophila grimshawi]
gi|193903541|gb|EDW02408.1| GH19909 [Drosophila grimshawi]
Length = 2487
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 83 TFCVVSKRFRKNYIHRFTGTQSLFLFHPWSPWRRVCVYIATNQFFDYCVMATILFNCIFL 142
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 143 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 200
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 201 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 260
Query: 178 Q 178
Q
Sbjct: 261 Q 261
>gi|344253552|gb|EGW09656.1| Sodium channel protein type 8 subunit alpha [Cricetulus griseus]
Length = 1931
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 116/141 (82%), Gaps = 1/141 (0%)
Query: 39 HPLFSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYL 97
+P+FS+ I+ TILTNC+ M P ++ E FTGIYTFES VK++ARGF ++ FT+L
Sbjct: 147 NPVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFL 206
Query: 98 RDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN 157
RD WNWLDF VI +AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK
Sbjct: 207 RDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKK 266
Query: 158 LRDVIILTMFSLSVFALMGLQ 178
L DV+ILT+F LSVFAL+GLQ
Sbjct: 267 LSDVMILTVFCLSVFALIGLQ 287
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1153 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1212
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1213 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1268
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1269 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1318
>gi|195426640|ref|XP_002061419.1| GK20910 [Drosophila willistoni]
gi|194157504|gb|EDW72405.1| GK20910 [Drosophila willistoni]
Length = 2039
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 48 TFCVVSKRFRKNYIHRFTGTKSLFLFHPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 107
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 108 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 165
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 166 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 225
Query: 178 Q 178
Q
Sbjct: 226 Q 226
>gi|170037582|ref|XP_001846636.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880804|gb|EDS44187.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 404
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L+ P++P RR +Y+ + F F++ TIL NCI +
Sbjct: 137 TFCVVSKRFRKNYIHRFTGTKSLFCFTPWSPTRRACVYLATNQFFDYFVMATILFNCIFL 196
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M + TIE E IF IYT E +K++A+GFIL +TYLR+ WNWLDF+VI Y T+
Sbjct: 197 AM--SETIEEAEYIFLAIYTSEMIIKMIAKGFILNKYTYLRNPWNWLDFVVITSGYATIA 254
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+D+GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 255 LDVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 314
Query: 178 Q 178
Q
Sbjct: 315 Q 315
>gi|344288111|ref|XP_003415794.1| PREDICTED: sodium channel protein type 11 subunit alpha [Loxodonta
africana]
Length = 1777
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 134/186 (72%), Gaps = 10/186 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL+V PFNPIR +AI +L+H +FS+FII T+ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKHALFVFGPFNPIRSLAIRVLIHSVFSVFIICTVTVNCVFMA-- 147
Query: 61 GTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
P ++ E +FTGIY FE+ +K++ARGF+L+ F++LRD WNWLD IVIA A+
Sbjct: 148 SIPAKHNSGNDSNIPEYVFTGIYIFEALIKILARGFVLDEFSFLRDPWNWLDSIVIATAF 207
Query: 114 VTMGIDLG-NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
+ +L++LRTFRV RALK +++V GLK IVGA++ SVK L DV+ILT+F LS+F
Sbjct: 208 ASYFPATKISLSSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMILTLFCLSIF 267
Query: 173 ALMGLQ 178
AL+G Q
Sbjct: 268 ALVGQQ 273
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F F+I IL + +++ + P I++ T+ IFT I+ E
Sbjct: 1036 LRKTCYQIVKHSWFESFVIFVILLSSGMLVFEDIHLKEQPKIQALLNCTDSIFTYIFILE 1095
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDFI++ ++ VT IDL L + RT R LR L+ ++
Sbjct: 1096 MGLKWVAFGFS----KYFTSAWCWLDFIIVIVS-VTSLIDLKPLKSFRTLRALRPLRALS 1150
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1151 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVSLFCGK 1194
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE-------STEVIFTGIYTFESA 81
I++V ++ P L I I+ N + + + E + +F+GI+ E
Sbjct: 566 IKKVLRTVVTDPFTELAITICIIVNTVFLALEHRRMKEDFKDMLATGNKVFSGIFIAEVC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV 141
+K++A L+ + Y WN DF+V L+ + ++ LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFHGGWNVFDFVVALLSLADVLTFDKSIPVLRSFRVLRVFKLAKSW 681
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G+
Sbjct: 682 PTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMH 718
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-------PTIESTEVIFTGIYT 77
P N + + ++ +F + II+ I+ N I M++ T+E+ + F I+T
Sbjct: 1344 PLNKCQGLVFDLVTSQVFDILIISLIVLNMISMMVESEDQSDDVESTLETLNLAFVAIFT 1403
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL----GNLA-------AL 126
E +K+ F L + Y + WN D +V+ L+ V+ I N+ +
Sbjct: 1404 VECLIKI----FALRQY-YFTNGWNLFDCVVVVLSIVSTMISYLKSKQNIPFPPTLFRIV 1458
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G++
Sbjct: 1459 RLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMK 1510
>gi|194886829|ref|XP_001976692.1| GG23017 [Drosophila erecta]
gi|190659879|gb|EDV57092.1| GG23017 [Drosophila erecta]
Length = 2362
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 Q 178
Q
Sbjct: 262 Q 262
>gi|340727515|ref|XP_003402087.1| PREDICTED: sodium channel protein 60E-like [Bombus terrestris]
Length = 2535
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ ++ P+NPIRR IY+ + F ++ TI+ NC +
Sbjct: 476 TFCVVSKRFRKNYIHRFTATNSWFIFSPWNPIRRYCIYLSTNQYFDYIVMATIILNCAFL 535
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T TIE E IF IYT E +K +A+GF L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 536 AM--TETIEEAEYIFLAIYTAEMVIKSIAKGFALNKYTYLRNPWNWLDFVVITSGYATIG 593
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 594 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 653
Query: 178 Q 178
Q
Sbjct: 654 Q 654
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
++ PLF L I I+ N + M ES +FT I+TFE +K++A
Sbjct: 1069 VVRDPLFELTITLCIVLNTGFLAMEHHGMSESIRQALNIGNKVFTSIFTFECLLKLLAL- 1127
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTI 147
S + + WN D I+++ + + + +L L+ +R R+LR LK +K +
Sbjct: 1128 ----SKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVL 1183
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ +I ++ L ++ ++ + + +FA++G+Q
Sbjct: 1184 LSIIISTIGALGNLTLVLVIVIYIFAVIGMQ 1214
>gi|148695063|gb|EDL27010.1| mCG13194 [Mus musculus]
Length = 1923
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 112/137 (81%), Gaps = 1/137 (0%)
Query: 43 SLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
S+ I+ TILTNC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD W
Sbjct: 46 SMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPW 105
Query: 102 NWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV 161
NWLDF VI AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV
Sbjct: 106 NWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDV 165
Query: 162 IILTMFSLSVFALMGLQ 178
+ILT+F LSVFAL+GLQ
Sbjct: 166 MILTVFCLSVFALIGLQ 182
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 654 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNH 713
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 714 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 769
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 770 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 825
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1122 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1181
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1182 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1237
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1238 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1287
>gi|119584949|gb|EAW64545.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_b [Homo
sapiens]
Length = 1043
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 130/185 (70%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG---IDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|313227560|emb|CBY22707.1| unnamed protein product [Oikopleura dioica]
Length = 1877
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 124/180 (68%), Gaps = 8/180 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+VV+ K K I+RFSAT ALW L P NP+RR I H +F+ I+ TILTNC MI
Sbjct: 67 TYVVLDKNKQIYRFSATKALWCLGPLNPLRRTCSRIYTHSVFNNLIMLTILTNCGFMIKE 126
Query: 61 GTPT--IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E +F IYT ES VK+++RG +L +FTYLRD WN LD VI A +
Sbjct: 127 DPPQWVNDYVERVFLAIYTLESTVKILSRGMVLANFTYLRDPWNILDISVILTAQIP--- 183
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+AALR FRVLRALK ++++PGLKTIV A+IESVK L+DV+ILT+F L+VFAL+GLQ
Sbjct: 184 ---GMAALRAFRVLRALKAISVIPGLKTIVSALIESVKALKDVMILTLFGLTVFALIGLQ 240
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 93/169 (55%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFES 80
R+ + I+ HP F +FI+ I+ + I + + P ++ ++ IFT ++ E
Sbjct: 1109 RKTSYRIIEHPWFEMFIVLMIMLSSIALAFEDVNLKDKPHLQRGLKYSDKIFTYVFICEM 1168
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAA---LRTFRVLRA 134
+K M GF Y +AW WLDF +++++ V++ +L G +A+ LRT R LR
Sbjct: 1169 ILKWMGYGFK----KYFTNAWCWLDFAIVSVSIVSLTAELLGNGQMASIRSLRTLRALRP 1224
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G+K +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1225 LRALSRFEGMKVVVNALVGAIPSIGNVLLVCLIFWLIFSIMGVTLFAGK 1273
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 17/185 (9%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VI 71
+W P +N +++ I P LFI I+ N + M + P E E I
Sbjct: 638 IWNCCPLWNRFQKLCSIICKDPFLDLFITLCIIANTVFMGLEKRPMEEDFEKMLQDANTI 697
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGNLAALRTFR 130
FT I+ E +K++ + + Y +D WN D ++ ++ + + +++ + +ALRTFR
Sbjct: 698 FTLIFALEMVIKLIG----MHPYYYFQDTWNIFDAFIVTMSLMEFILVNVSSFSALRTFR 753
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE--- 187
++R +K P L ++ +I ++ L ++I++ + L +FA++G+Q K ++
Sbjct: 754 LMRVMKLAKSWPTLNMLMKIIINAMGALGNLILVLIIILFIFAVVGMQLFHEKYKNQINS 813
Query: 188 -SHDK 191
+HD+
Sbjct: 814 ATHDQ 818
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 51/216 (23%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P P+ R I+ H F + I+ IL+N
Sbjct: 1388 GQDIFMTEEQRKYYNAMKKLGSKKPQKPVPRPKNKLQAWTFDIVTHQTFEITIMILILSN 1447
Query: 54 CILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I M++ +P ES IF I+T E +K+ A Y R+ WN DF
Sbjct: 1448 MITMLVEHEEMSPNFESVLEFINYIFIAIFTGECVLKMFAL-----RHHYFRNPWNCFDF 1502
Query: 107 IVIALAYVTMGIDLGNLAA-----------LRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ + G L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1503 VVVILSII--GSTLSEFIKQYFVQPTLFRIIRLARIGRILRLIRGAKGIRTLLFALMMSL 1560
Query: 156 KNLRD--------VIILTMFSLSVFALM----GLQD 179
L + + I ++F +S FA + GL D
Sbjct: 1561 PALLNIGLLLFLVIFIYSIFGMSQFAYVKRDGGLDD 1596
>gi|195489849|ref|XP_002092912.1| GE14454 [Drosophila yakuba]
gi|194179013|gb|EDW92624.1| GE14454 [Drosophila yakuba]
Length = 2362
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 Q 178
Q
Sbjct: 262 Q 262
>gi|390351073|ref|XP_793384.3| PREDICTED: sodium channel protein para-like [Strongylocentrotus
purpuratus]
Length = 2665
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 132/199 (66%), Gaps = 16/199 (8%)
Query: 1 TFVVVS---KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
+FVVV K IFRF+ DAL+ L P NP+RR+ I I + F LF+I TI+ NC+ +
Sbjct: 106 SFVVVGRKFKTSQIFRFTTNDALYCLSPLNPLRRLMIKIYTNEFFDLFVILTIIANCVFL 165
Query: 58 IM--PGTPTIES------TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI 109
++ P P +E E IFT IY+ E VK+ ARGF L TY+RDAWNWLDF VI
Sbjct: 166 MLDTPRPPEVEEPTYLKIAEYIFTTIYSVEMFVKIFARGFALHPHTYMRDAWNWLDFFVI 225
Query: 110 ALAYVTMG-----IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIIL 164
LAY+T G +D+GN LRTFRVLRALKT+++VPGLK+I+ A+I S K L +V++L
Sbjct: 226 VLAYITFGLVESGVDIGNFNFLRTFRVLRALKTISVVPGLKSIINALIRSTKMLGEVMLL 285
Query: 165 TMFSLSVFALMGLQDSRGK 183
T+F+L + AL+ LQ GK
Sbjct: 286 TVFALCIIALLALQLFMGK 304
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 90/168 (53%), Gaps = 13/168 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESA 81
++ +A ++++ PL LFI IL N ++M +S I FT I+T E
Sbjct: 609 VQYIASWVVLDPLMDLFITLCILGNTAFLMMDHEEISDSLAYISEEGNKVFTYIFTIECV 668
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+K++A L+ + ++ WN D V+ ++ + G+ ++ L+ LR+FR+LR LK
Sbjct: 669 LKLIA----LDK-KFFKNPWNVFDLFVVCVSLLEFGLANVEGLSVLRSFRLLRVLKLAQS 723
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDES 188
++T++ + ++ + +V+I+ + + +FA++G+Q G + E+
Sbjct: 724 WTTMRTLLSIIASAITAIGNVMIVLLIVMFIFAVIGMQILGGSYTPEN 771
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 30 RRVAIYILVHPLFSLFII--------TTILTNCILMIMPGTPTI-ESTEVIFTGIYTFES 80
R + + H +F FII T I + L + P I + +F GI+ E
Sbjct: 1130 REIMFTVCEHKVFETFIIVVIFGSSFTLIFEDIYLDLHPRRQEILKILNYVFFGIFVVEM 1189
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA---LRTFRVLRA 134
+K GF+ Y W WLDF ++ + +++ D L N AA LRT R LR
Sbjct: 1190 LIKWSGYGFV----KYFTSFWCWLDFCIVLVGLLSLLGDVIGLTNFAAFRALRTLRALRP 1245
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L+ ++ G+K +V AV+ ++ ++ +V+++ +F++MG+
Sbjct: 1246 LRAISRWEGMKIVVNAVVHAIPSIANVLLVCAMIWLIFSIMGV 1288
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 22 VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTG 74
+ P N I+ + F L I+T I+ N ILM++ T ++FT
Sbjct: 1444 IKQPTNKIQNFFYRLTTSNKFELVIVTVIVMNMILMMIDHYGMSQELTDITAKFNIVFTS 1503
Query: 75 IYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-----------L 123
I+ E+ +K++ G+ S+ Y + WN D IV+ + +GI L + L
Sbjct: 1504 IFVCEAVLKLI--GY---SWYYFKIPWNVFDIIVVIFS--VLGIVLDDVLNSVFINPTLL 1556
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR FR+ R L+ V G++ ++ A++ S+ L ++ IL + + VF+++G+
Sbjct: 1557 RVLRLFRIGRVLRLVKQAKGIRKLLFALVISLPALLNIGILLLLVIFVFSIIGMSQFGHI 1616
Query: 184 KSDESHDK 191
K D + DK
Sbjct: 1617 KLDGALDK 1624
>gi|350422941|ref|XP_003493336.1| PREDICTED: sodium channel protein 60E-like [Bombus impatiens]
Length = 2532
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ ++ P+NPIRR IY+ + F ++ TI+ NC +
Sbjct: 476 TFCVVSKRFRKNYIHRFTATNSWFIFSPWNPIRRYCIYLSTNQYFDYIVMATIILNCAFL 535
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T TIE E IF IYT E +K +A+GF L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 536 AM--TETIEEAEYIFLAIYTAEMVIKSIAKGFALNKYTYLRNPWNWLDFVVITSGYATIG 593
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 594 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 653
Query: 178 Q 178
Q
Sbjct: 654 Q 654
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
++ PLF L I I+ N + M ES +FT I+TFE +K++A
Sbjct: 1068 VVRDPLFELTITLCIVLNTGFLAMEHHGMSESIRQALNIGNKVFTSIFTFECLLKLLAL- 1126
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTI 147
S + + WN D I+++ + + + +L L+ +R R+LR LK +K +
Sbjct: 1127 ----SKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVL 1182
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ +I ++ L ++ ++ + + +FA++G+Q
Sbjct: 1183 LSIIISTIGALGNLTLVLVIVIYIFAVIGMQ 1213
>gi|102230389|gb|ABF70206.1| DSC1 [Drosophila melanogaster]
Length = 2409
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFQKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 Q 178
Q
Sbjct: 262 Q 262
>gi|442624686|ref|NP_001261175.1| Na channel protein 60E, isoform P [Drosophila melanogaster]
gi|440214630|gb|AGB93705.1| Na channel protein 60E, isoform P [Drosophila melanogaster]
Length = 2407
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 Q 178
Q
Sbjct: 262 Q 262
>gi|195119602|ref|XP_002004319.1| GI19864 [Drosophila mojavensis]
gi|193909387|gb|EDW08254.1| GI19864 [Drosophila mojavensis]
Length = 1354
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 48 TFCVVSKRFRKNYIHRFTGTKSLFLFHPWSPWRRVCVYIATNQFFDYCVMATILFNCIFL 107
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 108 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 165
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 166 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 225
Query: 178 QDSRGK 183
Q G+
Sbjct: 226 QVYMGE 231
>gi|157816404|gb|ABV82196.1| GH01510p [Drosophila melanogaster]
Length = 481
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 126 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 185
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 186 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 243
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 244 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 303
Query: 178 QDSRGK 183
Q G+
Sbjct: 304 QVYMGE 309
>gi|195353312|ref|XP_002043149.1| GM11913 [Drosophila sechellia]
gi|194127237|gb|EDW49280.1| GM11913 [Drosophila sechellia]
Length = 1556
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
>gi|442624684|ref|NP_001261174.1| Na channel protein 60E, isoform O [Drosophila melanogaster]
gi|440214629|gb|AGB93704.1| Na channel protein 60E, isoform O [Drosophila melanogaster]
Length = 366
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
>gi|383858043|ref|XP_003704512.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein 60E-like
[Megachile rotundata]
Length = 2443
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT + ++ P+NPIRR I++ + F ++ TI+ NC +
Sbjct: 384 TFCVVSKRFRKNYIHRFTATSSWFIFSPWNPIRRYCIFLSTNQYFDYMVMATIILNCAFL 443
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T TIE E IF IYT E +K +A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 444 AM--TETIEEAEYIFLAIYTAEMVIKSIAKGFVLNKYTYLRNPWNWLDFVVITSGYATIG 501
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 502 MEVGNLAGLRTFRVLRALKTVSILPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 561
Query: 178 Q 178
Q
Sbjct: 562 Q 562
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARG 88
++ PLF L I I+ N + M ES +FT I+TFE +K++A
Sbjct: 974 VVRDPLFELTITLCIVLNTGFLAMEHHGMSESIRQALNIGNKVFTSIFTFECLLKLLAL- 1032
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTI 147
S + + WN D I+++ + + + +L L+ +R R+LR LK +K +
Sbjct: 1033 ----SKDFFANGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVL 1088
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ +I ++ L ++ ++ + + +FA++G+Q
Sbjct: 1089 LSIIISTIGALGNLTLVLVIVIYIFAVIGMQ 1119
>gi|195586581|ref|XP_002083052.1| GD11909 [Drosophila simulans]
gi|194195061|gb|EDX08637.1| GD11909 [Drosophila simulans]
Length = 1809
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 73 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 132
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 133 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 190
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 191 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 250
Query: 178 QDSRGK 183
Q G+
Sbjct: 251 QVYMGE 256
>gi|442624682|ref|NP_001261173.1| Na channel protein 60E, isoform N [Drosophila melanogaster]
gi|440214628|gb|AGB93703.1| Na channel protein 60E, isoform N [Drosophila melanogaster]
Length = 934
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 Q 178
Q
Sbjct: 262 Q 262
>gi|385298709|ref|NP_001245290.1| voltage-dependent cation channel SC1 [Bombyx mori]
gi|378829682|gb|AFC61133.1| voltage-dependent cation channel SC1 [Bombyx mori]
Length = 2225
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT +L+ P++P+RR +Y+ F F++ TIL NC+ +
Sbjct: 164 TFCVVSKRFRKNYIHRFTATRSLFWWSPWSPVRRACVYLSTDQYFDYFVMATILLNCVFL 223
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M + TIE E IF IYT E +K +A+GFIL +TYLR+ WNWLDF+VI Y T+G
Sbjct: 224 AM--SETIEEAEYIFLAIYTAEMIIKCIAKGFILNKYTYLRNPWNWLDFVVITSGYATIG 281
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRAL+TV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 282 MEVGNLAGLRTFRVLRALETVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 341
Query: 178 Q 178
Q
Sbjct: 342 Q 342
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 40 PLFSLFIITTILTNCILMIM---------PGTPTIESTEVIFTGIYTFESAVKVMARGFI 90
P F F++ I + I + P + T + F I+ E +K +A GF
Sbjct: 1340 PAFEWFVLVLIFASSITLCFEDIHLEKNKPLKKILYWTNLGFCMIFIIEMFLKWIALGF- 1398
Query: 91 LESFTYLRDAWNWLDFIVIALAYVTMGID----LGNLAALRTFRVLRALKTVAIVPGLKT 146
F Y W LDF ++ ++ ++ I+ L L +LRT R LR L+ ++ G++
Sbjct: 1399 ---FRYFTSFWTLLDFTIVFVSVFSLLIEENENLKVLRSLRTLRALRPLRAISRWQGMRI 1455
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+V A++ ++ ++ +V+++ + +F++MG+Q GK
Sbjct: 1456 VVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGK 1492
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARG 88
I+ PLF LFI T I+ N + + + E+ +FT I+T E +KVMA
Sbjct: 797 IVKDPLFELFITTCIVLNTLFLALEHHGMSENVRRVLDIGNKVFTSIFTLECIMKVMAMS 856
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTI 147
+ F Y WN D I+++ + + + +L + ++ L + +A +K +
Sbjct: 857 --KDFFAY---GWNIFDLIIVSASLLDLIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVL 911
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ +I ++ L ++ + + + +FA++G+Q
Sbjct: 912 LSIIISTIGALGNLTFVLVIVIYIFAVIGMQ 942
>gi|342837665|tpg|DAA34922.1| TPA_inf: voltage-dependent sodium channel SCN11A [Monodelphis
domestica]
Length = 1794
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 138/187 (73%), Gaps = 10/187 (5%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL+VL PFNPIRR+AI I+ LFS+FII T++ NC++
Sbjct: 87 TFMVLNKKRTIYRFSAKSALFVLGPFNPIRRLAI-IVSFTLFSMFIICTVIVNCVIQWWE 145
Query: 61 GTPTIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA 112
+ TI++ + +FT IY FE+ +K++ARG +L+ FTYLRD WNWLD VI LA
Sbjct: 146 HSTTIKARPSSSLPLFKYVFTAIYVFEALIKILARGLVLDEFTYLRDPWNWLDSTVIMLA 205
Query: 113 YVTMGID-LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
+++ I+ L +++ALRTFRVLRALK ++I+ GLK IVGA++ SVK L DV+ILT+F LS+
Sbjct: 206 FLSCKIEKLDSVSALRTFRVLRALKAISIISGLKVIVGALLRSVKKLVDVMILTIFCLSI 265
Query: 172 FALMGLQ 178
FAL+ Q
Sbjct: 266 FALVAQQ 272
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 31 RVAIY-ILVHPLFSLFIITTIL--------TNCILMIMPGTPTIES-TEVIFTGIYTFES 80
R+ Y I+ H F FII IL +C L P + + T+ +FT I+T E
Sbjct: 1041 RITCYRIVKHDWFESFIIFMILLSSGALIFEDCSLQSKPKIKELLNFTDRVFTYIFTLEM 1100
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYV---TMGIDLGNLAALRTFRVLRALKT 137
+K +A GF Y +AW LDF+++ ++ + N+ + RT R LR L+
Sbjct: 1101 FLKWVAFGFR----KYFTNAWCCLDFLIVNVSLTSTFSCSPKSFNVKSFRTLRALRPLRA 1156
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1157 LSQFEGMKVVVNALIGAIPAIMNVLLVCLIFWLIFCMLGVNLFSGK 1202
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PGTPTIESTEVI------FTG 74
P N + ++ + F +FIIT I N + M+ P P + ++ F
Sbjct: 1355 PLNKCQAFVFDVVTNQAFDIFIITLICLNMVTMMAETDSPEGPNKQKENLLEYLNRAFVV 1414
Query: 75 IYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL--GNLA-------- 124
I+T E +K+ F L F Y + WN D +V+ L+ V+ + L N A
Sbjct: 1415 IFTVECLLKI----FALRQF-YFANGWNLFDCVVVVLSIVSNMVALLEKNKAIPFPPVLF 1469
Query: 125 -ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+R R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A++G+ +
Sbjct: 1470 RVIRLARIGRILRLVRAAKGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIIGMTNFAHV 1529
Query: 184 KSDESHD 190
K D D
Sbjct: 1530 KYDAGID 1536
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I+RV +++ P L I I+ N I M M + + +FTGI+ E
Sbjct: 562 IKRVVELVIMDPFADLAITICIILNTIFMSMEHYGQGKDFDKMLCIGNYVFTGIFIAEMC 621
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAALRTFRVLRALKTV 138
+K++A L+ + Y WN D I++ L+ V + I NL+ LR+ R+LR K
Sbjct: 622 LKIIA----LDPYYYFLRPWNIFDSIIVILSIVEIIISDVLKSNLSILRSLRLLRVFKLA 677
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 678 KSWPTLNTLIKIIGHSVGALGNLTLVLAIIVFIFSVVGVQ 717
>gi|351713932|gb|EHB16851.1| Sodium channel protein type 10 subunit alpha [Heterocephalus
glaber]
Length = 2017
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 122/183 (66%), Gaps = 19/183 (10%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH + L NC +
Sbjct: 126 TFMVLNKGRTISRFSATQALWLFSPFNLIRRSAIKVSVH--------SYPLPNCFFHL-- 175
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
+FT IYTFE+ +K++ARGF L F YLRD WNWLDF VI LAYV +L
Sbjct: 176 ---------YVFTVIYTFEALIKILARGFCLNEFAYLRDPWNWLDFSVITLAYVGTATEL 226
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 227 KGFSGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLTDVTILTVFCLSVFALVGLQLF 286
Query: 181 RGK 183
+G
Sbjct: 287 KGN 289
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL +C L P + E + +FT I+ FE
Sbjct: 1229 LRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYADRVFTFIFVFE 1288
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ D+ ++ ALRT R LR
Sbjct: 1289 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLIAKILKYSDMESIKALRTLRALR 1344
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1345 PLRALSRFEGMRVVVDALVGAIPSIVNVLLVCIIFWLIFSIMGVNLFAGK 1394
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++ V ++ P L I I+ N + M M + E ++FT +T E
Sbjct: 743 LKAVLFELVTDPFAELTITLCIVVNTVFMAMEHHGMSSAFETMLQIGNIVFTIFFTAEMV 802
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
K++A + + Y + WN D I++ ++ + + + G+L+ LRTFR+LR K
Sbjct: 803 FKIIA----FDPYYYFQKKWNIFDCIIVTVSLLELSVVRKGSLSVLRTFRLLRVFKLAKS 858
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ I+ + +FAL+G Q
Sbjct: 859 WPTLNTLIKIIGNSVGALGNLTIILAIIVFIFALVGKQ 896
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 39/192 (20%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R + Y I+ F + I+ I
Sbjct: 1517 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFLFDIVTRQAFDVSIMVLICL 1576
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T V+ F ++T E +K+ F L + Y + WN D
Sbjct: 1577 NMITMMVETDDQSKEKTRVLGKINQFFVAVFTGECVLKM----FALRHY-YFTNGWNVFD 1631
Query: 106 FIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---I 162
FIV+ ++++GI +R R+ R L+ + G++T++ A++ S+ L ++ +
Sbjct: 1632 FIVV---FLSIGI-------IRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLL 1681
Query: 163 ILTMFSLSVFAL 174
L MF S+F +
Sbjct: 1682 FLVMFIYSIFGM 1693
>gi|149022138|gb|EDL79032.1| rCG26308, isoform CRA_b [Rattus norvegicus]
gi|149022139|gb|EDL79033.1| rCG26308, isoform CRA_b [Rattus norvegicus]
Length = 1878
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 608 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNH 667
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 668 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 723
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 724 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 779
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1076 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1135
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1136 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1191
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1192 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1241
>gi|296531480|gb|ADH29875.1| MIP20602p [Drosophila melanogaster]
Length = 437
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGL+TI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLRTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
>gi|119631723|gb|EAX11318.1| sodium channel, voltage-gated, type I, alpha, isoform CRA_a [Homo
sapiens]
Length = 1866
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 597 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 656
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 657 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 712
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 713 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 768
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1065 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1124
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1125 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1180
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1181 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1230
>gi|119631724|gb|EAX11319.1| sodium channel, voltage-gated, type I, alpha, isoform CRA_b [Homo
sapiens]
Length = 1877
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 608 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 667
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 668 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 723
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 724 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 779
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1076 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1135
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1136 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1191
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1192 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1241
>gi|62859921|ref|NP_001016886.1| sodium channel, voltage gated, type VIII, alpha subunit [Xenopus
(Silurana) tropicalis]
gi|89272881|emb|CAJ81487.1| sodium channel, voltage gated, type VIII, alpha [Xenopus (Silurana)
tropicalis]
Length = 245
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRFSA AL++L PFNP+R+ AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNRGKTIFRFSAAPALYILSPFNPLRKFAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVP 142
LGN++ALRTFRVLRALKT++++P
Sbjct: 213 LGNVSALRTFRVLRALKTISVIP 235
>gi|9507065|ref|NP_062138.1| sodium channel protein type 11 subunit alpha [Rattus norvegicus]
gi|56748616|sp|O88457.1|SCNBA_RAT RecName: Full=Sodium channel protein type 11 subunit alpha;
AltName: Full=NaN; AltName: Full=Sensory neuron sodium
channel 2; AltName: Full=Sodium channel protein type XI
subunit alpha; AltName: Full=Voltage-gated sodium
channel subunit alpha Nav1.9
gi|3372615|gb|AAC40199.1| voltage-gated Na channel alpha subunit NaN [Rattus norvegicus]
gi|4741729|emb|CAB41850.1| voltage-gated sodium channel alpha subunit [Rattus norvegicus]
Length = 1765
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 5/182 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNP+R + I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPLRSLMIRISVHSVFSMFIICTVIINCMFMANS 149
Query: 61 GTPTIES--TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
+ ++ E +F GIY E+ +K++ARGFI++ F++LRD WNWLDFIVI A T
Sbjct: 150 MERSFDNDIPEYVFIGIYILEAVIKILARGFIVDEFSFLRDPWNWLDFIVIGTAIATCFP 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
G + NL+ALRTFRV RALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL+G
Sbjct: 210 GSQV-NLSALRTFRVFRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFALVG 268
Query: 177 LQ 178
Q
Sbjct: 269 QQ 270
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
IR+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1023 IRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLRCTDNIFTFIFLLE 1082
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ ++L +L + RT R LR L+ ++
Sbjct: 1083 MILKWVAFGFR----RYFTSAWCWLDFLIVVVSVLSL-MNLPSLKSFRTLRALRPLRALS 1137
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1138 QFEGMKVVVYALISAIPAILNVLLVCLIFWLVFCILGVNLFSGK 1181
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESA 81
I++V I+ P L I I+ N + + + ++ + I FTGI+ E
Sbjct: 561 IKKVLRTIMTDPFTELAITICIIINTVFLAVEHHNMDDNLKTILKIGNWVFTGIFIAEMC 620
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALA-----YVTMGIDLGNLAALRTFRVLRALK 136
+K++A L+ + Y R WN D IV L+ Y T+ + N + L + RVLR K
Sbjct: 621 LKIIA----LDPYHYFRHGWNVFDSIVALLSLADVLYNTLSDN--NRSFLASLRVLRVFK 674
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 675 LAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 716
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-------PTIESTEVIFTGIYT 77
P N + ++ +F + I+ I+ N I+M+ T + + F I+T
Sbjct: 1331 PLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAESADQPKDVKKTFDILNIAFVVIFT 1390
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAAL----R 127
E +KV F L Y + WN D +V+ L+ ++ + D+ L R
Sbjct: 1391 IECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSRLEDSDISFPPTLFRVVR 1445
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1446 LARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1495
>gi|332030051|gb|EGI69876.1| Sodium channel protein 60E [Acromyrmex echinatior]
Length = 2004
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ ++ P+NPIRR I++ + F ++ TIL NC+ +
Sbjct: 4 TFCVVSKRFRKNYIHRFTATNSWFIFSPWNPIRRCCIFLSTNQYFDYVVMATILLNCVFL 63
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T + E+IF IYT E +K +A+GFIL +TYLR+ WNWLDF+VI Y T+G
Sbjct: 64 AM--TETFDDAELIFLAIYTAEMVIKSIAKGFILNKYTYLRNPWNWLDFVVITSGYATIG 121
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ +GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 122 MAVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 181
Query: 178 Q 178
Q
Sbjct: 182 Q 182
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE +K++A
Sbjct: 590 PLFELMITLCIVLNTGFLAMEHHGMSESIRQALNIGNKVFTSIFTFECFLKLLAL----- 644
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTIVGAV 151
S + + WN D I+++ + + + +L L+ +R R+LR LK +K ++ +
Sbjct: 645 SKDFFNNGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLLSII 704
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ + + + +FA++G+Q
Sbjct: 705 ISTIGALGNLTFVLVIVIYIFAVIGMQ 731
>gi|432924970|ref|XP_004080675.1| PREDICTED: sodium channel protein type 4 subunit alpha A-like
[Oryzias latipes]
Length = 1815
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/158 (56%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
Query: 23 LDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPTIEST-EVIFTGIYTFES 80
LDPF ++ I I + ++S+FI+ TIL+NC++M M P T E +FTGIYT E+
Sbjct: 75 LDPFYKAQKTFIVISKGNTIYSMFIMITILSNCVMMTMSNPPAWSKTIEYVFTGIYTVEA 134
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAI 140
+KV++RGF++ SFT+LRD WNWLDF+VI++AY+T +DLGN++ALRTFRVLRALKT+ +
Sbjct: 135 TIKVLSRGFLVGSFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITV 194
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+PGLKTIV A+I+SVK + DV++LT+F+L+VFAL+GLQ
Sbjct: 195 IPGLKTIVAALIQSVKKMVDVMVLTVFALAVFALVGLQ 232
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1004 LRKTCFTIVEHDWFETFIVFMILLSSGALAFEDVHIERRRTIKTILEFADKVFTYIFVIE 1063
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ V++ DLG + +LRT R LR
Sbjct: 1064 MLLKWVAYGFK----TYFTNAWCWLDFFIVDISLVSLVASWLGYSDLGPIKSLRTLRALR 1119
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1120 PLRALSRFEGMRVVVNALVGAIPSIFNVMLVCLIFWLIFSIMGVNLFAGK 1169
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYTFESAVKVMAR 87
++++ P L I I+ N + M M P + ++FTGI+T E K++A
Sbjct: 561 FVVMDPFVDLAITICIVLNTLFMAMEHYPMTAEFDHMLSVGNLVFTGIFTAEMFFKLIA- 619
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKT 146
++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K P L
Sbjct: 620 ---MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM 676
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + SV L ++ ++ + +FA++G+Q
Sbjct: 677 LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 708
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N ++ + ++ F +FI+ I N + M++ E V F ++T
Sbjct: 1322 PTNFLQGMVFDLISQQFFDIFIMVLICLNMVTMMVETDDQSAEMEDFLFKLNVAFIVVFT 1381
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN--------LAALRT 128
E +K+ F L + + + WN DFIV+ L+ TM DL +R
Sbjct: 1382 GECLLKL----FALRHY-FFTNGWNVFDFIVVILSIAGTMLSDLIEKYFVSPTLFRVIRL 1436
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R+ R L+ + G++T++ A++ S+ L ++ + L MF S+FA+
Sbjct: 1437 ARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFAM 1485
>gi|149018259|gb|EDL76900.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_b
[Rattus norvegicus]
Length = 1785
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 132/182 (72%), Gaps = 5/182 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNP+R + I I VH FS+FII T++ NC+ M
Sbjct: 110 TFMVLNKKRTIYRFSAKRALFILGPFNPLRSLMIRISVHSFFSMFIICTVIINCMFMANS 169
Query: 61 GTPTIES--TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
+ ++ E +F GIY E+ +K++ARGFI++ F++LRD WNWLDFIVI A T
Sbjct: 170 MERSFDNDIPEYVFIGIYILEAVIKILARGFIVDEFSFLRDPWNWLDFIVIGTAIATCFP 229
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
G + NL+ALRTFRV RALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL+G
Sbjct: 230 GSQV-NLSALRTFRVFRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFALVG 288
Query: 177 LQ 178
Q
Sbjct: 289 QQ 290
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
IR+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1043 IRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLRCTDNIFTFIFLLE 1102
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ ++L +L + RT R LR L+ ++
Sbjct: 1103 MILKWVAFGFR----RYFTSAWCWLDFLIVVVSVLSL-MNLPSLKSFRTLRALRPLRALS 1157
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1158 QFEGMKVVVYALISAIPAILNVLLVCLIFWLVFCILGVNLFSGK 1201
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESA 81
I++V I+ P L I I+ N + + + ++ + I FTGI+ E
Sbjct: 581 IKKVLRTIMTDPFTELAITICIIINTVFLAVEHHNMDDNLKTILKIGNWVFTGIFIAEMC 640
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALA-----YVTMGIDLGNLAALRTFRVLRALK 136
+K++A L+ + Y R WN D IV L+ Y T+ + N + L + RVLR K
Sbjct: 641 LKIIA----LDPYHYFRHGWNVFDSIVALLSLADVLYNTLSDN--NRSFLASLRVLRVFK 694
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 695 LAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 736
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-------PTIESTEVIFTGIYT 77
P N + ++ +F + I+ I+ N I+M+ T + + F I+T
Sbjct: 1351 PLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAESADQPKDVKKTFDILNIAFVVIFT 1410
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAAL----R 127
E +KV F L Y + WN D +V+ L+ ++ + D+ L R
Sbjct: 1411 IECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSRLEDSDISFPPTLFRVVR 1465
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1466 LARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1515
>gi|332215571|ref|XP_003256918.1| PREDICTED: sodium channel protein type 11 subunit alpha [Nomascus
leucogenys]
Length = 1445
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 132/185 (71%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V++K + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + +++LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-QVSSLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1046 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLEKQPKIQELINCTDIIFTYIFIGE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1106 MVLKWVAFGF----GKYFTSAWCCLDFIIVIISVTTL-INLKELKSFRTLRALRPLRALS 1160
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1161 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFFSGK 1204
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++V ++ P L I I+ N + + M ES E +FTGI+ E
Sbjct: 566 IKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEESFEKMLNIGNSVFTGIFMAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ ++ + G+ LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVISSKFEKGSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|149018258|gb|EDL76899.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_a
[Rattus norvegicus]
Length = 1765
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 132/182 (72%), Gaps = 5/182 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNP+R + I I VH FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPLRSLMIRISVHSFFSMFIICTVIINCMFMANS 149
Query: 61 GTPTIES--TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
+ ++ E +F GIY E+ +K++ARGFI++ F++LRD WNWLDFIVI A T
Sbjct: 150 MERSFDNDIPEYVFIGIYILEAVIKILARGFIVDEFSFLRDPWNWLDFIVIGTAIATCFP 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
G + NL+ALRTFRV RALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL+G
Sbjct: 210 GSQV-NLSALRTFRVFRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFALVG 268
Query: 177 LQ 178
Q
Sbjct: 269 QQ 270
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
IR+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1023 IRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLRCTDNIFTFIFLLE 1082
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ ++L +L + RT R LR L+ ++
Sbjct: 1083 MILKWVAFGFR----RYFTSAWCWLDFLIVVVSVLSL-MNLPSLKSFRTLRALRPLRALS 1137
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1138 QFEGMKVVVYALISAIPAILNVLLVCLIFWLVFCILGVNLFSGK 1181
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESA 81
I++V I+ P L I I+ N + + + ++ + I FTGI+ E
Sbjct: 561 IKKVLRTIMTDPFTELAITICIIINTVFLAVEHHNMDDNLKTILKIGNWVFTGIFIAEMC 620
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALA-----YVTMGIDLGNLAALRTFRVLRALK 136
+K++A L+ + Y R WN D IV L+ Y T+ + N + L + RVLR K
Sbjct: 621 LKIIA----LDPYHYFRHGWNVFDSIVALLSLADVLYNTLSDN--NRSFLASLRVLRVFK 674
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 675 LAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 716
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-------PTIESTEVIFTGIYT 77
P N + ++ +F + I+ I+ N I+M+ T + + F I+T
Sbjct: 1331 PLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAESADQPKDVKKTFDILNIAFVVIFT 1390
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAAL----R 127
E +KV F L Y + WN D +V+ L+ ++ + D+ L R
Sbjct: 1391 IECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSRLEDSDISFPPTLFRVVR 1445
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1446 LARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1495
>gi|403278950|ref|XP_003931042.1| PREDICTED: sodium channel protein type 11 subunit alpha [Saimiri
boliviensis boliviensis]
Length = 1724
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 131/183 (71%), Gaps = 5/183 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++ PFN IR +AI I VH LFS+FII+T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFIFGPFNSIRSLAIRISVHSLFSMFIISTVIINCVFMASG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
T S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD +VI A V+
Sbjct: 150 LGKTSNSNDTDIAEYVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSLVIGTAMVS 209
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
NL +LRTFRVLRALK +++V LK IVGA++ SVK L +VIILT+F LS+FAL+
Sbjct: 210 YWCIGINLLSLRTFRVLRALKAISVVSRLKVIVGALLRSVKKLINVIILTLFCLSIFALV 269
Query: 176 GLQ 178
G Q
Sbjct: 270 GQQ 272
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 984 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLERQPKIQKLLNCTDLIFTHIFILE 1043
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ VT IDL L + RT R LR L+ ++
Sbjct: 1044 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVS-VTSLIDLKELKSFRTLRALRPLRALS 1098
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1099 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVYFFSGK 1142
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE----STEVIFTGIYTFESA 81
I++V ++ P L I I+ N + + M P+ E + ++FT I+ E
Sbjct: 565 IKKVLRIVMTDPFTELAITICIIINTVFLAMEHHKMEPSFEKMLNTGNLVFTSIFLAEMC 624
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY--VTMGI-DLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ V GI + LR+FRVLR K
Sbjct: 625 LKIIA----LDPYHYFRRGWNVFDSIVALLSFADVLNGILQKKSWPFLRSFRVLRVFKLA 680
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + +F++ G+Q
Sbjct: 681 KSWPTLNTLIKIIGNSVGALGSLTVVLAIVIFIFSVAGMQ 720
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 41/205 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + I+ +F + II I+ N
Sbjct: 1259 GQDIFMTEEQKKYYNAMKKLGSKKPLKPIPRPLNKCQGLVFDIVTSQIFDIIIIILIILN 1318
Query: 54 CILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I M+ ++TE IF I+T E +K+ F L + Y + WN D
Sbjct: 1319 MITMMAESYNQPKATESTLDHLNWIFVVIFTVECLIKI----FALRQY-YFTNGWNLFDC 1373
Query: 107 IVIALAYVTMGIDLGNLAA-------------LRTFRVLRALKTVAIVPGLKTIVGAVIE 153
+V+ L+ V+ + + LA +R R+ R L+ V G++T++ A++
Sbjct: 1374 VVVVLSIVSTMVSI--LAKQDHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMM 1431
Query: 154 SVKNLRDVIILTMFSLSVFALMGLQ 178
S+ +L ++ +L + ++A++G+
Sbjct: 1432 SLPSLFNIGLLLFLVMFIYAILGMN 1456
>gi|348556763|ref|XP_003464190.1| PREDICTED: sodium channel protein type 11 subunit alpha-like [Cavia
porcellus]
Length = 1795
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 132/189 (69%), Gaps = 8/189 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL+V PFNPIR +AI ILVH LFS+FII T++ NC+ M M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFVFGPFNPIRSLAIRILVHSLFSMFIICTVVVNCLFMAMT 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAY 113
ST E FT IY E+ +K+ ARGFIL+ F++LRD WNWLD IVI A+A
Sbjct: 150 SAKDNNSTKTDFPEYTFTAIYILEALIKICARGFILDEFSFLRDPWNWLDSIVIGTAIAD 209
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
+ G + L +LRTFRV RALK +++V GLK IVGA++ SVK L DV++LT+F L +FA
Sbjct: 210 LVPGSQI-KLLSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMVLTLFCLCIFA 268
Query: 174 LMGLQDSRG 182
L+G Q +G
Sbjct: 269 LVGQQLFQG 277
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + +P I+ T+ IFT I+ E
Sbjct: 1074 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDSNLHKSPHIQKLLNCTDNIFTSIFVLE 1133
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
A+K +A GF+ Y +AW WLDFI++ ++ V+ + G L A RT R LR L+ +A
Sbjct: 1134 MALKWVAFGFM----KYFTNAWCWLDFIIVVVSVVSFMNNTG-LKAFRTLRALRPLRALA 1188
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1189 RFEGMKVVVNALIGAIPAIVNVLLVCLIFWLIFCILGVNFFSGK 1232
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
+ E++FTGI+ E +K++A L+ + Y R WN D V+A+ +T I
Sbjct: 652 QGLEIVFTGIFIAEMCLKIIA----LDPYHYFRHGWNIFD-SVVAIVSLTEAIT-DKWVF 705
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FRVLR K P L T++ + SV L ++ ++ L +F+++G+Q
Sbjct: 706 LRSFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVLFIFSVVGMQ 758
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 37/215 (17%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + ++ H LF +F+++ I N
Sbjct: 1337 GQDIFMTEEQKKYYNAMKKLGTKKPLKPIPRPLNKCQGLVFDLVTHQLFDVFVMSLIALN 1396
Query: 54 CILMIMP-------GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T +E F I+T E +K+ F L + Y + WN D
Sbjct: 1397 MLCMMVETRHQSDYTTAVLEYLNTAFVIIFTVECLIKI----FALRQY-YFTNGWNLFDC 1451
Query: 107 IVIALAYVTMGIDLGN----------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVK 156
+V+ L+ V+ I L + L +R R+ R L+ V G++T++ A++ S+
Sbjct: 1452 VVVVLSIVSALITLAHKKTILFPPTLLRIIRLARIGRILRLVRAARGIRTLLFALMMSLP 1511
Query: 157 NLRDVIILTMFSLSVFALMGLQD-SRGKKSDESHD 190
+L ++ +L + ++A++G+ S +K E D
Sbjct: 1512 SLFNIGLLLFLVMFIYAILGMNCFSEMEKKGEIDD 1546
>gi|338714767|ref|XP_001916634.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 11
subunit alpha-like [Equus caballus]
Length = 1781
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 134/186 (72%), Gaps = 8/186 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++ PFN IR +AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFIFGPFNSIRGLAIRISVHSLFSMFIICTVIINCVFMATA 149
Query: 61 G-----TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++ E +FTGIY FE+ +K++ARGF+L+ F++LRD WNWLD IVIA A+V+
Sbjct: 150 SEKDRSNKDADNAEYVFTGIYIFEALIKILARGFVLDEFSFLRDPWNWLDSIVIATAFVS 209
Query: 116 MGIDLG---NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
+ +L++LRTFRV RALK +++V GLK IVGA++ SV+ L +V+ILT+F LS+F
Sbjct: 210 YSPNKFSGISLSSLRTFRVFRALKAISVVSGLKVIVGALLRSVRKLVNVMILTLFCLSIF 269
Query: 173 ALMGLQ 178
AL+G Q
Sbjct: 270 ALVGQQ 275
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P I++ T+ +FT I+ E
Sbjct: 1042 LRKTCYQIVKHGWFESFIIFVILLSSGALVFEDIHLTNKPNIQALLNYTDSVFTYIFILE 1101
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ ++ +DL + RT R LR L+ ++
Sbjct: 1102 MGLKWVAFGF----GKYFSSAWCWLDFVIVIVSVASL-LDLNVSKSFRTLRALRPLRALS 1156
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1157 QFEGMKVVVNALMGAIPAILNVLLVCLIFWLIFCILGVNFFCGK 1200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESA 81
I++ ++ P L + I+ N + + M PT E+ ++FTG++ E
Sbjct: 565 IKKALKTMMTDPFTELAVTICIIINTVFLAMEHYNMDPTFETMLNTGNLVFTGVFMAEMF 624
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY--VTMGIDLGNLAA--LRTFRVLRALKT 137
+K++A L+ + Y R WN D +V L++ V I G R+ RVLR K
Sbjct: 625 LKIIA----LDPYHYFRRGWNIFDSVVALLSFADVMNSIVAGKQKWPFFRSLRVLRVFKL 680
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 681 AKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 721
>gi|12658323|gb|AAK01090.1| putative BSC1 sodium channel protein [Blattella germanica]
Length = 2304
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ ++ P+N IRR I++ + F ++ TIL NC+ +
Sbjct: 93 TFCVVSKRFRKNYIHRFTATNSFFIFSPWNAIRRTCIFLSTNQYFDYVVMITILLNCVFL 152
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IYT E +K +A+GFIL +TYLR+ WNWLDF+VI Y T+G
Sbjct: 153 AM--TDTVEEAEYIFLAIYTAEMIIKSIAKGFILNKYTYLRNPWNWLDFVVITSGYATIG 210
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 211 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 270
Query: 178 Q 178
Q
Sbjct: 271 Q 271
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 25/153 (16%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + + M ES +FT I+T E +K++A
Sbjct: 734 PLFDLLITLCIILNTMFLAMEHHGMSESVRQALDIGNKVFTSIFTLECFLKILAL----- 788
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGN-------LAALRTFRVLRALKTVAIVPGLK 145
S Y WN D I+++ + + + +L + L LR ++ R+ T+ + L
Sbjct: 789 SKEYFACGWNIFDLIIVSASLLDLSFELMDSLVVLRCLRLLRVLKLARSWTTMKV---LL 845
Query: 146 TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+I+ + I ++ NL V+++ ++ +FA++G+Q
Sbjct: 846 SIIISTIGALGNLTFVLVIVIY---IFAVIGMQ 875
>gi|119631735|gb|EAX11330.1| sodium channel, voltage-gated, type II, alpha 2, isoform CRA_b
[Homo sapiens]
Length = 1881
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI AYVT ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 598 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 657
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 658 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 713
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 714 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 769
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1065 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1124
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1125 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1180
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1181 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1230
>gi|6693705|gb|AAF24980.1|AF150882_1 voltage-gated sodium channel alpha subunit, alternate splice
variant SCN12A-s [Homo sapiens]
Length = 1444
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 130/185 (70%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1045 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1104
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1105 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1159
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1160 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1203
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG---IDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGNLTVVLVIVIFIFSVVGMQ 721
>gi|119631740|gb|EAX11335.1| sodium channel, voltage-gated, type III, alpha, isoform CRA_e [Homo
sapiens]
Length = 1868
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 112/136 (82%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M + P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI +AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 600 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 659
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 660 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 715
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 716 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 771
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1064 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1123
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1124 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1179
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1180 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1229
>gi|119584950|gb|EAW64546.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_c [Homo
sapiens]
Length = 1591
Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 130/185 (70%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1045 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1104
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1105 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1159
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1160 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1203
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG---IDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|291411648|ref|XP_002722100.1| PREDICTED: sodium channel, voltage-gated, type XI, alpha
[Oryctolagus cuniculus]
Length = 1772
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 134/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--- 57
TF+V++K + I+RFSA AL++ PF+ IR +AI I VH +FS+ II+T++ NC+ M
Sbjct: 93 TFMVLNKKRTIYRFSAKRALFIFGPFSSIRSLAIRISVHSVFSMLIISTVVINCVFMARG 152
Query: 58 -IMPGTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ T+ T E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI A V+
Sbjct: 153 RVKDSNSTVPDTAEYVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGTAIVS 212
Query: 116 MGIDLG-NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
++ NL +LRTFRV RALK +++V GLK IVGA++ SVK L DV+ILT+F LS+FAL
Sbjct: 213 YFPNININLLSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMILTLFCLSIFAL 272
Query: 175 MGLQ 178
+G Q
Sbjct: 273 VGQQ 276
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-----TPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ P IE T+ IFT I+ E
Sbjct: 1034 LRKTCYQIVKHSWFESFIIFVILLSSGTLVFEDVYLKYQPNIERLLNCTDNIFTFIFILE 1093
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ I+L +L + RT R LR L+ ++
Sbjct: 1094 MGLKWVAFGFR----KYFTSAWCWLDFVIVIVSVISL-INLKSLKSFRTLRALRPLRALS 1148
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1149 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCIVGVNFFSGK 1192
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 20 LWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIF 72
LWV I++ ++ P L + I+ N + + + + + ++F
Sbjct: 564 LWVC-----IKKALRAVVTDPFTELAVTLCIIVNTVFLALEHHNMDKDFKAILSTGNLVF 618
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVL 132
T I+ E +K+MA L+ + Y R WN D +V L+ V + NL LR RVL
Sbjct: 619 TAIFIAEMCLKIMA----LDPYYYFRQRWNIFDCVVALLSLVDVIYVRHNLPYLRPLRVL 674
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R K P L T++ + SV ++ ++ + +F+++G+Q
Sbjct: 675 RVFKLAKSWPTLNTLIKIIGHSVGAFGNLTVVLAIVVFIFSVVGMQ 720
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 37/203 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + ++ +F + II I+ N
Sbjct: 1311 GQDIFMTEEQKKYYNAMKKLGTKKPQKPIPRPLNKCQGLVFDLVTSQVFDIIIILLIVLN 1370
Query: 54 CILMIMPGTPT-------IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M+M T ++ V F I+T E VKV F L + Y + WN D
Sbjct: 1371 MVSMMMETTEQSRAMTAVLDYLNVAFVVIFTAECLVKV----FALRQY-YFTNGWNLFDG 1425
Query: 107 IVIALAYV-TMGIDLGNLAAL----------RTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V TM L N + R R+ R L+ V G++T++ A++ S+
Sbjct: 1426 VVVVLSIVSTMVSALENQKHIPFPPTLFRIVRLARIGRVLRLVRAARGIRTLLFALMMSL 1485
Query: 156 KNLRDVIILTMFSLSVFALMGLQ 178
+L ++ +L + ++A++G+
Sbjct: 1486 PSLFNIGLLLFLVMFIYAILGMN 1508
>gi|390464462|ref|XP_002749444.2| PREDICTED: sodium channel protein type 3 subunit alpha [Callithrix
jacchus]
Length = 1979
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 122/179 (68%), Gaps = 22/179 (12%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILSPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIHFSSDD---- 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 205 -----------------HSSLSSGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 246
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 710 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 769
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 770 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 825
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 826 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 881
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1174 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1233
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1234 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1289
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1290 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1339
>gi|426339992|ref|XP_004033919.1| PREDICTED: sodium channel protein type 11 subunit alpha [Gorilla
gorilla gorilla]
Length = 1791
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 131/185 (70%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNSTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI++ L +LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGINI-KLLSLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1045 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1104
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1105 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1159
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1160 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVYFFSGK 1203
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKKSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|296228390|ref|XP_002759783.1| PREDICTED: sodium channel protein type 11 subunit alpha [Callithrix
jacchus]
Length = 1783
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 134/185 (72%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++ PFN IR +AI + VH LFS+FII+T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFIFGPFNSIRSLAIRVSVHSLFSMFIISTVIINCVFMASG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
T S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD +VI A ++
Sbjct: 150 LGKTSNSNDTDIAEYVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSLVIGTAIIS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + NL +LRTFRVLRALK +++V LK IVGA++ SVK L +VIILT+F LS+FA
Sbjct: 210 FVRGIII-NLLSLRTFRVLRALKAISVVSRLKVIVGALLRSVKKLINVIILTLFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + G P I+ T+ IFT I+ E
Sbjct: 1043 LRKTCYQIVKHGWFESFIIFVILLSSGALIFEDVHLEGRPKIQELLNCTDFIFTHIFILE 1102
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ VT I+L L + RT R LR L+ ++
Sbjct: 1103 MLLKWVAFGF----GKYFTSAWCCLDFIIVIVS-VTSLINLKELKSFRTLRALRPLRALS 1157
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1158 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVYFFSGK 1201
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 IKKVLRIVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNTGNLVFTSIFLAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY--VTMGI-DLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ V GI + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNVFDSIVALLSFADVLNGIFQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + +F++ G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLAIVIFIFSVAGMQ 721
>gi|410036709|ref|XP_003950105.1| PREDICTED: sodium channel protein type 11 subunit alpha [Pan
troglodytes]
Length = 1445
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 94/185 (50%), Positives = 130/185 (70%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V+++ + I+RFSA AL++ PF+ IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFSSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1046 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVRLENQPKIQELLNCTDIIFTHIFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1106 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1160
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1161 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1204
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG---IDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|397511552|ref|XP_003826135.1| PREDICTED: sodium channel protein type 11 subunit alpha isoform 2
[Pan paniscus]
Length = 1445
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 94/185 (50%), Positives = 130/185 (70%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V+++ + I+RFSA AL++ PF+ IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFSSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1046 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVRLENQPKIQELLNCTDIIFTHIFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1106 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1160
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1161 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1204
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG---IDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|8552|emb|CAA32567.1| sodium channel protein [Drosophila melanogaster]
Length = 362
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 130/191 (68%), Gaps = 5/191 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
T VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 31 TVCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 90
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI + Y T+G
Sbjct: 91 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITMRYATIG 148
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ ++ SV L +V+ LT+F + VFAL L
Sbjct: 149 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIIRPLLHSVAQLAEVMTLTIFCVMVFALFAL 208
Query: 178 QDSRGKKSDES 188
Q G+ ++
Sbjct: 209 QVYMGELRNKC 219
>gi|313231356|emb|CBY08471.1| unnamed protein product [Oikopleura dioica]
Length = 1914
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 134/186 (72%), Gaps = 6/186 (3%)
Query: 1 TFVVVSK--GKD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF V+++ GK I RFSA+ +L++ PFNP+RR AI +++P F + II TIL NC+ +
Sbjct: 104 TFCVINRRFGKRYINRFSASKSLYLFSPFNPVRRAAINAIINPGFDVVIILTILINCVFL 163
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ ++ E +FT IYT E +KV+A+GFIL FTYLRDAWNWLDFIV+ LAYVTM
Sbjct: 164 AL--DDPVDELEYVFTAIYTLEVVIKVIAKGFILNKFTYLRDAWNWLDFIVVVLAYVTMM 221
Query: 118 I-DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
++GN++ LRTFRVLRA K+++IVPGLKTIV A+ S+K L +V+ + +F L V +L+G
Sbjct: 222 TPEIGNVSGLRTFRVLRAFKSLSIVPGLKTIVNALFLSMKPLSEVLFIMVFLLIVISLIG 281
Query: 177 LQDSRG 182
LQ G
Sbjct: 282 LQAYSG 287
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMIMPGT-----------PTIESTEVIFTGIYTF 78
R +Y + HP F FI+ I + + + + ++ E+IF ++T
Sbjct: 1160 RAGVYFVAKHPYFEGFILFLIAASTVCLTLEDKNLNDGKNVALKEILDCLELIFAVLFTM 1219
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTV 138
E +K + G + Y W LDFI++ +++V +G + + +LR+ R LRAL+ +
Sbjct: 1220 EMGMKWVGFGL----WEYFTSFWTVLDFIIVCISWVGIGANASGVTSLRSMRTLRALRPL 1275
Query: 139 AIV---PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ G++ +V A+I + + +VI + + VF +MG+Q
Sbjct: 1276 RAISRWEGMRVVVNALIHCIPAIGNVITVCILFWLVFGIMGVQ 1318
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCIL-------MIMPGTPTIE 66
FS P N +++ I+ P F + + I N + M + +
Sbjct: 1469 FSTKPKKHAPKPHNHFQKMVYDIVCKPYFEICVFGLICLNMAVLACEHYGMTKEWSDGLR 1528
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN---- 122
++IFT I+ E A+K++ L S+ Y RD +N DFIVI L+ V GI L
Sbjct: 1529 LADIIFTVIFLLECAIKIIG----LRSY-YFRDPFNVFDFIVIMLSSV--GIILEQFLDF 1581
Query: 123 ------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
L +R FR+ R L+ + G++ ++ ++ES+ L ++ +L + +FA++G
Sbjct: 1582 FISPTLLRVVRVFRIFRVLRVIKAARGIRRLMITLLESIPALLNIAVLLFLGMVIFAILG 1641
Query: 177 LQD-SRGKKSDESHD 190
+ KK D +D
Sbjct: 1642 MSSFMHVKKRDALND 1656
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 41 LFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESAVKVMARGFILES 93
+F +FI+ I+TN + + E + I FT I+ E+ +K+ + GF
Sbjct: 722 MFDVFIVLCIITNTMFLAADHHDADEELKNILTLGNSVFTYIFVAEAILKITSYGF---- 777
Query: 94 FTYLRDAWNWLDFIVI---------ALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGL 144
FTYL+D WN DFI++ A+ V G L LRT R+LR + + +
Sbjct: 778 FTYLKDPWNTFDFIIVVISVSDVILAMRNVDEGSQQSGLNVLRTLRLLRVFRLAQMWKTM 837
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSD 186
++ + +S+ + + ++ L +FA++G Q K +D
Sbjct: 838 GRLLEIIYKSIMEVGYLTLVLFIVLYIFAVIGKQCFADKYND 879
>gi|47218637|emb|CAG04966.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1960
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
Query: 41 LFSLFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRD 99
+FS+ I+ TILTNC M + P ++ E FTGIYTFES +K++ARGF + FT+LRD
Sbjct: 1 MFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFCVGKFTFLRD 60
Query: 100 AWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLR 159
WNWLDF VI +AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L
Sbjct: 61 PWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLS 120
Query: 160 DVIILTMFSLSVFALMGLQ 178
DV+ILT+F LSVFAL+GLQ
Sbjct: 121 DVMILTVFCLSVFALIGLQ 139
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P + I+ V +++ P L I I+ N + M M P E +
Sbjct: 641 YRFANTCLIWDCCPLWLKIKEVVSMVVMDPFVDLTITICIVLNTLFMAMEHYPMTEEFDN 700
Query: 70 --VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAAL 126
+FTGI+T E +K++A L + Y ++ WN D I+++L+ + +G+ ++ L+ L
Sbjct: 701 VLSVFTGIFTAEMCLKIIA----LHPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVL 756
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 757 RSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 808
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 1141 LRKTCFIIVEHNWFETFIIFMILLSSGALAFEDIYIEQRRTIKTVLEYADKVFTYVFILE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF+ Y +AW WLDF+++ ++ V++ +L + +LRT R LR
Sbjct: 1201 MLLKWVAYGFV----KYFTNAWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
>gi|378829684|gb|AFC61134.1| voltage-dependent cation channel SC1 [Nilaparvata lugens]
Length = 2122
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ ++ P+N IRR I++ + F ++TTIL NC+ +
Sbjct: 133 TFCVVSKRFRKNYIHRFTATNSFFLFSPWNSIRRTCIFLSTNQYFDYVVMTTILLNCVFL 192
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
T +E E IF IYT E +K +A+GFIL +TYLR+ WNWLDF+VI Y T+G
Sbjct: 193 AK--TEPLEEAEYIFLAIYTAEMIIKSVAKGFILNKYTYLRNPWNWLDFVVITSGYATIG 250
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 251 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 310
Query: 178 Q 178
Q
Sbjct: 311 Q 311
>gi|344244729|gb|EGW00833.1| Sodium channel protein type 10 subunit alpha [Cricetulus griseus]
Length = 1866
Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 119/183 (65%), Gaps = 29/183 (15%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH
Sbjct: 130 TFMVLNKGRTISRFSATWALWLFSPFNLIRRTAIKVSVH--------------------- 168
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 169 --------SYAFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 220
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 221 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 280
Query: 181 RGK 183
+G
Sbjct: 281 KGN 283
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 92/172 (53%), Gaps = 19/172 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + P ++S T+ +FT I+ FE
Sbjct: 1050 LRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLDKKPRVKSMLEYTDRVFTFIFVFE 1109
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ +L ALRT R LR
Sbjct: 1110 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILKYSDVASLKALRTLRALR 1165
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK S
Sbjct: 1166 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1217
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAV 82
+ V ++ P L I I+ N + M M P E+ + ++FT +T E A
Sbjct: 630 KMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTEAFDAMLQAGNIVFTVFFTMEMAF 689
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIV 141
K++A + + Y + WN D +++ ++ + + I G+L+ LRTFR+LR K
Sbjct: 690 KIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSISKKGSLSVLRTFRLLRVFKLAKSW 745
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ---DSRGKKSD 186
P L T++ + SV L ++ + + +FAL+G Q D G + D
Sbjct: 746 PTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQLLGDDYGCRKD 793
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 40/203 (19%)
Query: 7 KGKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILT 52
+G+DIF ++A L P PI R I+ F + I+ I
Sbjct: 1338 RGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIAIMVLICL 1397
Query: 53 NCI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLD 105
N I +M+ + E T+++ F ++T E +K+ F L + Y + WN D
Sbjct: 1398 NMITMMVETDDQSEEKTKILGRINMFFVAVFTGECVMKM----FALRQY-YFTNGWNVFD 1452
Query: 106 FIVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIES 154
FIV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S
Sbjct: 1453 FIVVILSIGSLVFSAILKSLESYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1512
Query: 155 VKNLRDV---IILTMFSLSVFAL 174
+ L ++ + L MF S+F +
Sbjct: 1513 LPALFNIGLLLFLVMFIYSIFGM 1535
>gi|365767365|gb|AEW90240.1| voltage-gated sodium channel Nav2.5 [Clytia hemisphaerica]
Length = 1800
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK--GKDI-FRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TFVVV+K GK + +RF +LW+ NP+R+V IYI H F +FI+ TI NC+ M
Sbjct: 116 TFVVVNKKFGKQVVYRFCKEKSLWLFGTQNPLRKVNIYIFTHQYFEIFILLTIAVNCVFM 175
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ P E E IF IYT E +K++A+GF++ ++YLR++WNWLDF+V+ L YVTM
Sbjct: 176 ALSDPP--ELMEFIFAAIYTLEMIIKILAKGFVMHKYSYLRNSWNWLDFVVVVLGYVTMT 233
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ NL RTFRVLRALKT++ V GLK +V +++S+K + DVIILT+F +S+FAL+GL
Sbjct: 234 PWVNNLDGFRTFRVLRALKTISTVKGLKAMVNTLLKSMKMMTDVIILTLFFISIFALIGL 293
Query: 178 Q 178
Q
Sbjct: 294 Q 294
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFR 130
F I+T E VK+ A GF+ TY + WN LD ++A++ ++ G GNL ALR+ R
Sbjct: 1024 FAIIFTLEFLVKLFALGFV----TYFTNFWNLLDVFIVAISLSSLFGDSGGNLKALRSLR 1079
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
LR L+ ++ G+K +V A++ S+ ++ +V+++ + +F++MG GK S
Sbjct: 1080 GLRPLRAISRFEGMKVVVNALVYSIPSIGNVLLVCVAFWLIFSIMGYNLFGGKFS 1134
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 21/153 (13%)
Query: 42 FSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGFILESF 94
F FI++ IL N + M++ P ++ +FTGI+T E+ +++ A LE F
Sbjct: 1306 FEFFIMSVILLNMLSMMIQHYNQPREVDLALDYLNYVFTGIFTIEAILRLTA--MRLEYF 1363
Query: 95 TYLRDAWNWLDFIVIALAYVTMGIDLGN---------LAALRTFRVLRALKTVAIVPGLK 145
Y N DFI++ + + +D N +R FR+ R L+ G++
Sbjct: 1364 KY---GMNVFDFIIVVFSIAAIVMDAYNQNFIISPGLFRVVRVFRLGRLLRFFEGAKGIR 1420
Query: 146 TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ +++S L ++ L ++A+MG+
Sbjct: 1421 KLLFTIVKSAPALSNIGTLLFLITFIYAIMGMN 1453
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGID 119
+E +FT ++ E +K++ G+ L+ YL++ WN D ++ ++ + T G+
Sbjct: 559 LEICNYVFTTMFAIEMVMKIL--GYTLKG--YLKNKWNMFDGTLVIVSIIDILLSTTGLV 614
Query: 120 LGN-LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GN L+ L+ FR++R +K + ++ + S+ L +V ++ + +F++MG+Q
Sbjct: 615 DGNVLSFLKVFRLMRVMKLAKSWKTMGQLLSTIAGSMGALGNVTVILGLIIYIFSVMGMQ 674
>gi|50897545|gb|AAT85835.1| voltage-gated sodium channel Nav1.7 [Homo sapiens]
Length = 539
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 107/130 (82%), Gaps = 1/130 (0%)
Query: 50 ILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV 108
ILTNCI M M P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+V
Sbjct: 1 ILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVV 60
Query: 109 IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
I AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F
Sbjct: 61 IVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFC 120
Query: 169 LSVFALMGLQ 178
LSVFAL+GLQ
Sbjct: 121 LSVFALIGLQ 130
>gi|50897541|gb|AAT85833.1| voltage-gated sodium channel Nav1.7 [Homo sapiens]
Length = 528
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 107/130 (82%), Gaps = 1/130 (0%)
Query: 50 ILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV 108
ILTNCI M M P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+V
Sbjct: 1 ILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVV 60
Query: 109 IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
I AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F
Sbjct: 61 IVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFC 120
Query: 169 LSVFALMGLQ 178
LSVFAL+GLQ
Sbjct: 121 LSVFALIGLQ 130
>gi|22796540|emb|CAD10507.1| voltage-gated sodium channel [Homo sapiens]
Length = 1791
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1045 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1104
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1105 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1159
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1160 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1203
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTGPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|119578601|gb|EAW58197.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_a
[Homo sapiens]
Length = 1844
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WN
Sbjct: 1 MIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI +AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 589 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 648
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 649 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 704
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 705 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 760
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1052 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1111
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A+ V++ +LG + +LRT + L+
Sbjct: 1112 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVFLVSLIANALGYSELGAIKSLRTLKALK 1167
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LK ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1168 PLKALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1217
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1371 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1430
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1431 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1483
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1484 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1536
>gi|115583667|ref|NP_054858.2| sodium channel protein type 11 subunit alpha [Homo sapiens]
gi|124053649|sp|Q9UI33.2|SCNBA_HUMAN RecName: Full=Sodium channel protein type 11 subunit alpha;
AltName: Full=Peripheral nerve sodium channel 5;
Short=PN5; AltName: Full=Sensory neuron sodium channel
2; AltName: Full=Sodium channel protein type XI subunit
alpha; AltName: Full=Voltage-gated sodium channel
subunit alpha Nav1.9; AltName: Full=hNaN
gi|6572950|gb|AAF17480.1|AF188679_1 voltage-gated sodium channel type XI alpha subunit [Homo sapiens]
gi|225000012|gb|AAI72234.1| Sodium channel, voltage-gated, type XI, alpha subunit [synthetic
construct]
Length = 1791
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1045 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1104
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1105 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1159
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1160 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1203
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|6693697|gb|AAF24976.1|AF109737_1 voltage-gated sodium channel alpha subunit SCN12A [Homo sapiens]
Length = 1791
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1045 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1104
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1105 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1159
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1160 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1203
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGNLTVVLVIVIFIFSVVGMQ 721
>gi|119578605|gb|EAW58201.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_e
[Homo sapiens]
Length = 1855
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WN
Sbjct: 1 MIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI +AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 600 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 659
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 660 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 715
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 716 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 771
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1063 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1122
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A+ V++ +LG + +LRT + L+
Sbjct: 1123 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVFLVSLIANALGYSELGAIKSLRTLKALK 1178
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LK ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1179 PLKALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1228
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1382 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1441
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1442 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1494
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1495 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1547
>gi|119578606|gb|EAW58202.1| sodium channel, voltage gated, type VIII, alpha, isoform CRA_f
[Homo sapiens]
Length = 1596
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WN
Sbjct: 1 MIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI +AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 341 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 400
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 401 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 456
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 457 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 512
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 804 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 863
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A+ V++ +LG + +LRT + L+
Sbjct: 864 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVFLVSLIANALGYSELGAIKSLRTLKALK 919
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LK ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 920 PLKALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 969
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1123 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1182
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1183 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1235
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1236 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1288
>gi|402860589|ref|XP_003894708.1| PREDICTED: sodium channel protein type 11 subunit alpha isoform 1
[Papio anubis]
gi|402860591|ref|XP_003894709.1| PREDICTED: sodium channel protein type 11 subunit alpha isoform 2
[Papio anubis]
Length = 1788
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++ PFN IR +AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFIFGPFNSIRSLAIRISVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
G + L +LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 CIPGSTI-KLLSLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1042 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLKDQPKIQELLNCTDIIFTHIFILE 1101
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1102 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLKELKSFRTLRALRPLRALS 1156
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1157 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFFSGK 1200
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIE----STEVIFTGIYTFESA 81
I++V ++ P L I I+ N + + M P+ E + ++FTGI+ E
Sbjct: 566 IKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEPSFEKMLNTGNLVFTGIFMAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV 141
+K++A L+ + Y R WN D IV L++ + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVIFQNTSWPFLRSFRVLRVFKLAKSW 681
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 PTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 718
>gi|3005562|gb|AAC09306.1| voltage-gated sodium channel alpha subunit protein [Polyorchis
penicillatus]
gi|3005564|gb|AAC38974.1| voltage-gated sodium channel alpha subunit [Polyorchis
penicillatus]
Length = 1695
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK--GKDI-FRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF+VV+ GK + FRF +L++ P + IRR IYI H F + I+ TI+TNC+ M
Sbjct: 79 TFMVVANKLGKQVVFRFCKEKSLFLFGPASFIRRFNIYIFTHQYFEIGILLTIVTNCVFM 138
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ P E IF IYTFE +K++A+GFIL ++YLR+AWNWLDF+V+ L Y+TM
Sbjct: 139 ALSDPPA--EAEFIFAAIYTFEMVIKILAKGFILHKYSYLRNAWNWLDFLVVILGYITMS 196
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ NL+ +RTFRVLRALKT++ V GLK +V +++S+K + DV+ILT+F +S+FAL+GL
Sbjct: 197 PHINNLSGIRTFRVLRALKTISTVKGLKAMVNTLMKSMKMMTDVLILTLFFISIFALIGL 256
Query: 178 QDSRGK 183
Q GK
Sbjct: 257 QLFPGK 262
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 59 MPGTPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV 114
+P PT+E F I+T E +K+ A GF+ Y + WN LD ++ ++
Sbjct: 933 LPKRPTLEKFLQYCNYFFAVIFTVELLIKLFALGFM----KYFTNFWNLLDVFIVCISLS 988
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
++ NL ALR+ R LR L+ ++ G+K +V A++ S+ ++ +V+++ + +F++
Sbjct: 989 SLFGKGANLKALRSLRGLRPLRAISRFEGMKVVVNALLYSIPSIANVLLVCVVFWLIFSI 1048
Query: 175 MG 176
MG
Sbjct: 1049 MG 1050
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 31 RVAIYILVH-PLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAV 82
R A++ +H F FI++ IL N + M++ + +E +FTGI+T E+ +
Sbjct: 1216 RAALFDFIHTKYFEFFIMSVILLNMLTMMIQHHGQSQQVSLALEYLNFLFTGIFTLEAII 1275
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTM-------GIDLGNLAALRTFRVLR 133
++ A LE F Y N DF+++ ++A + M + G +R FR+ R
Sbjct: 1276 RLTA--MRLEYFKY---GMNVFDFVIVVFSIAVIIMIEYDEEFFVSPGLFRVVRVFRLGR 1330
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ G++ ++ +++S L ++ L ++A+M +
Sbjct: 1331 LLRFFEGAKGIRKLLFTIVKSAPALSNIGTLLFLITFIYAIMAMN 1375
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 25/154 (16%)
Query: 42 FSLFIITTILTNCILMI-----MPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFT- 95
F FI I+ N LM MP +E +F I+T A + GF + +FT
Sbjct: 489 FEGFITFCIMLNTCLMASEHYKMP--KKLEDALNVFNYIFT---ATFCIEMGFKILAFTP 543
Query: 96 --YLRDAWNWLDF---------IVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGL 144
Y+R+ WN D IV++ A V G LA L+ FR++R LK +
Sbjct: 544 KGYIRNRWNVFDGLLVIVSIIDIVLSNADVVKG---NQLAVLKVFRLMRVLKLAQSWKTM 600
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + S+ L +V ++ + +F+++G+Q
Sbjct: 601 GQLLSTIASSMGALGNVTVILGLIIYIFSVVGMQ 634
>gi|443688724|gb|ELT91324.1| hypothetical protein CAPTEDRAFT_134859, partial [Capitella teleta]
Length = 1694
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 129/189 (68%), Gaps = 14/189 (7%)
Query: 1 TFVVVS---KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
+FVVV+ K I+RFS+T A L P+NPIRR+A+ I + F +I TIL NC+ +
Sbjct: 157 SFVVVASRFKRLYIYRFSSTPAFLCLSPWNPIRRIALRIATNQYFDYCVIATILINCVFL 216
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+P P T IFT IYTFE VK++ARGF + YLRD WNWLDF VI +AYVT+
Sbjct: 217 ALP--PQGWDT-YIFTAIYTFECIVKLLARGFFFHQYAYLRDLWNWLDFTVIMIAYVTIL 273
Query: 118 I--------DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
I D+GNL+ALR FRVLRALKTV+IVPGLKTI+ A+++S++ +VI+LT+F +
Sbjct: 274 IEQTGSQSSDIGNLSALRAFRVLRALKTVSIVPGLKTIISALLKSMRMFAEVIVLTLFCM 333
Query: 170 SVFALMGLQ 178
VFAL LQ
Sbjct: 334 MVFALFALQ 342
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYT 77
P N ++ + + F I+ I N I M T T++ +IFT I+T
Sbjct: 1284 PKNKVQCFFFDVSMSSKFEFAIVVLIFLNMISMAQEHYQQSQAYTDTLDIMNIIFTTIFT 1343
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LGN-------LAALRT 128
E+ VK+ + YLR WN D IV+ L+ + + +D L N L +R
Sbjct: 1344 LEALVKIFGM-----RWHYLRRPWNVFDLIVVILSVIGVILDDILSNVFVTPSLLRVVRI 1398
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
FR+ R L+ + G++ ++ A++ S+ L ++ +L + ++A+ G+
Sbjct: 1399 FRIGRVLRLIKAAKGIRKLLFALVISLPALFNIAMLLFLVVFIYAIFGM 1447
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID------LGN 122
+++F I+ E +K + GF Y W LDFI++ ++ ++ D L +
Sbjct: 1013 DIVFVTIFVVEMFIKWIGLGFK----KYFTTFWTILDFIIVVISISSLAADSAGQGDLDS 1068
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV-IILTMFSLSVFALMGLQDSR 181
ALRT R R L+ ++ G+K +V A++ ++ + +V ++ T+F L VF++ G+Q
Sbjct: 1069 FKALRTLRAFRPLRAISRWQGMKIVVNALMYAIPAIFNVAVVCTIFWL-VFSIAGVQLYG 1127
Query: 182 GK 183
GK
Sbjct: 1128 GK 1129
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 34 IYILVHPL-FSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVM 85
IY +V L F LFI I+ N I+M + E +F+ I+ E+ VK++
Sbjct: 638 IYKIVSDLAFELFITACIVLNVIVMALEFHGMSEELRSGLQVANYVFSAIFIVEAIVKLL 697
Query: 86 ARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG----NLAALRTFRVLRALKTVAIV 141
A S Y + WN D ++ + + ID+ +L+ L++FR+LR L+ +
Sbjct: 698 AL-----SKLYFKSGWNVFDLFIVIITIADILIDISGANQDLSYLKSFRLLRLLRVFKLA 752
Query: 142 PGLKT---IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
KT ++ ++ ++ L ++ + + +FA++G++
Sbjct: 753 QTWKTMRLLLSIILSTMSALGNLTFILGIIIYIFAVIGME 792
>gi|431910582|gb|ELK13650.1| Sodium channel protein type 10 subunit alpha [Pteropus alecto]
Length = 1998
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 118/183 (64%), Gaps = 33/183 (18%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + V
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVYV---------------------- 128
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 129 -----------FTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGEAIDL 177
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 178 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 237
Query: 181 RGK 183
+G
Sbjct: 238 KGN 240
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+++ T+ +FT I+ FE
Sbjct: 1181 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLDYTDRVFTFIFVFE 1240
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIAL------AYVTMGIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ + A + D+ ++ ALRT R LR
Sbjct: 1241 MLLKWVAYGFK----NYFTNAWCWLDFLIVNISLTSLVAKILQYSDMSSIKALRTLRALR 1296
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1297 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGMNFFSGK 1346
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
I+ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 701 IVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMFQIGNIVFTVFFTAEMVFKIIA-- 758
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G G +A LR+FR+LR LK P L T+
Sbjct: 759 --FDPYYYFQKRWNIFDCIIVTVSLIELGAAKKGGMAVLRSFRLLRVLKLAKSWPTLNTL 816
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+ + SV L ++ I+ + +FAL+G Q D H+
Sbjct: 817 IKIIGNSVGALGNLTIILAIIVFIFALVGKQLLGENYRDNRHN 859
>gi|149022142|gb|EDL79036.1| rCG27299 [Rattus norvegicus]
Length = 1352
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNCI M + P ++ E FTGIYTFES +K++ARGF + FT+LRD WN
Sbjct: 1 MLIMCTILTNCIFMTLSNPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF+VI AY+T ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1050 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1109
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1110 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1165
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1166 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1215
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E
Sbjct: 585 YRFAHTFLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 644
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+IFTGI+ E +K++A ++ + Y + WN D +++ L+ + + + D+
Sbjct: 645 VLAVGNLIFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLIELFLADVEG 700
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 701 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 756
>gi|198432012|ref|XP_002125324.1| PREDICTED: similar to Sodium channel protein type 4 subunit alpha
(Sodium channel protein type IV subunit alpha)
(Voltage-gated sodium channel subunit alpha Nav1.4)
(Sodium channel protein skeletal muscle subunit alpha)
(Mu-1) [Ciona intestinalis]
Length = 2015
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 130/185 (70%), Gaps = 5/185 (2%)
Query: 1 TFVVVSK--GKD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VV++ G D ++RFSAT +V PF P+R++AI I++HPLF ++TTIL NC+ +
Sbjct: 113 TFCVVTQRFGTDHVYRFSATRGFFVFSPFQPLRQLAIRIILHPLFDAIVMTTILVNCVFL 172
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ I + E +FT +YTFE VK++ RGFIL FTYLRD WNWLDFIV+ +AY T+
Sbjct: 173 GL--NEEIAAAEYLFTALYTFEMVVKMVGRGFILNPFTYLRDPWNWLDFIVVIIAYATIL 230
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
N+++LRTFRV+RA K+V+IVPGL+TIV A+ S+K L +V+ + F L V +L+ L
Sbjct: 231 GSASNVSSLRTFRVVRAFKSVSIVPGLRTIVNALFHSMKPLAEVMFIMCFLLIVVSLIAL 290
Query: 178 QDSRG 182
Q +G
Sbjct: 291 QAYQG 295
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 19/166 (11%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMIMP-----GTPT----IESTEVIFTGIYTFES 80
R+ Y+LV H F FI+ IL++ + + M P +E E +FT ++T E
Sbjct: 1086 RMCCYMLVKHRFFEWFILFLILSSTVCLAMEDIHLNSDPVRKLVLERLEYVFTALFTVEM 1145
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA---ALRTFRVLRALKT 137
+K + G + Y W LD ++A +++ GI L A +LRT R LR L+
Sbjct: 1146 VLKWLGIGPV----KYFTSFWCVLDCAIVASSWI--GIVLSQAAQFRSLRTLRALRPLRA 1199
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ G+K +V A+I + ++ +V+ + + VF +MG+Q +G+
Sbjct: 1200 ISRWQGMKVVVNALIYCIPSIGNVLCVCLLIWMVFGIMGVQFFKGR 1245
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFT 73
W L FN ++ H F L + IL N I ++M T ++ ++ FT
Sbjct: 1400 WQLRIFN--------LVTHSRFELAVFLLILMNMITLMMEHYKMSYEWTVALKYADISFT 1451
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAAL 126
+++ E+ +K++ + Y RDA+N DFIVI ++ + G L NL AL
Sbjct: 1452 ALFSIEAGLKLIGM-----RYHYFRDAFNVFDFIVILVSII--GFILENLVAL 1497
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ H LF I+ +I+ N + + + +P + + +FTGI+T E+ +K+ A G
Sbjct: 593 VINHKLFETVIMLSIIINTLFLAIDHHGISPELNNALNVGNHVFTGIFTVEAIIKITALG 652
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI 118
Y ++ WN DF+++ ++ + +G+
Sbjct: 653 VA----GYAKELWNLFDFVIVFISLIEVGL 678
>gi|281350867|gb|EFB26451.1| hypothetical protein PANDA_020395 [Ailuropoda melanoleuca]
Length = 1775
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 133/195 (68%), Gaps = 17/195 (8%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLF--------SLFIITTILT 52
TF+V++K + I+RFSA AL++L PFNPIR +AI I VH S+FII T++
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSLAIKISVHSYLFIASFTKSSMFIICTVII 149
Query: 53 NCILMIMP-----GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFI 107
NC+ M ++ E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD I
Sbjct: 150 NCVFMASAFGKENNNIDTDNAEYVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSI 209
Query: 108 VIALAYVTMGIDLG----NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
VI A+ T ++ +L++LRTFRV RALK +++V GLK IVGA++ SVK L DV+I
Sbjct: 210 VIVTAFATYVPEVRESGFSLSSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMI 269
Query: 164 LTMFSLSVFALMGLQ 178
LT+F LS+FAL+G Q
Sbjct: 270 LTLFCLSIFALVGQQ 284
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P I++ T+ IFT I+ E
Sbjct: 1033 LRKTCYQIVKHSWFESFIIFVILLSSGALVFEDVHLEKRPNIQALLNCTDHIFTYIFILE 1092
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDFI++ ++ VT IDL +L + RT R LR L+T++
Sbjct: 1093 MGLKWVAFGF----GKYFTSVWCWLDFIIVIVS-VTSLIDLKSLKSFRTLRALRPLRTLS 1147
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1148 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1191
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY--VTMGIDLGNLAAL- 126
++F GI+ E +K++A L+ + Y R WN D IV L++ V I +G + L
Sbjct: 619 LVFAGIFMAEMCLKIIA----LDPYNYFRRGWNIFDSIVALLSFADVMNSIVVGKKSLLF 674
Query: 127 -RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R RVLR K P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 675 FRPLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 727
>gi|50897543|gb|AAT85834.1| voltage-gated sodium channel Nav1.7 [Homo sapiens]
Length = 539
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 50 ILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV 108
ILTNCI M M P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+V
Sbjct: 1 ILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVV 60
Query: 109 IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
I AY+T ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F
Sbjct: 61 IVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFC 120
Query: 169 LSVFALMGLQDSRGK 183
LSVFAL+GLQ S G
Sbjct: 121 LSVFALIGLQLSMGN 135
>gi|365812021|gb|AEX00074.1| voltage-gated sodium channel Nav2.5 [Nematostella vectensis]
Length = 1829
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK--GKD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF+VV++ GK ++RF A+ +LW+ P NP+RR I+++ H F L I+ TILTNC+ +
Sbjct: 72 TFLVVARKFGKQYVYRFHASKSLWLFSPRNPLRRFVIFLITHQYFELLILFTILTNCVFL 131
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ P E E +F IYT E +K++ RGF L + YLR+AWNWLDF V+ L Y+TM
Sbjct: 132 AINDPP--EEPEFVFAAIYTAEMILKIIGRGFALHKYAYLRNAWNWLDFSVVVLGYITML 189
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
D+ NL+ +RTFRVLRAL+T++ V GLK +V +++S+ L DV+ILT F + VFAL+GL
Sbjct: 190 PDVQNLSGIRTFRVLRALRTISAVKGLKAMVNTLLKSIIMLSDVLILTTFFMCVFALIGL 249
Query: 178 Q 178
Q
Sbjct: 250 Q 250
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 19/169 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIEST--------EVIFTGIYTFES 80
IR+V++ I+ +F FI IL N + M + ++ST IFT ++ E
Sbjct: 469 IRKVSLKIVNDSVFETFITLCILFNTLAMALEHF-EMDSTFSGILDIFNYIFTAVFILEM 527
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL------GNLAALRTFRVLRA 134
+K+MA GF Y ++ WN D ++ L+ V M + L+ LRTFR+LR
Sbjct: 528 VLKLMALGFK----KYAKNRWNLFDGTIVVLSIVDMLLTFTKLITGAGLSVLRTFRLLRV 583
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LK + ++ + +S+ + ++I++ + +FA++G+Q R K
Sbjct: 584 LKLAQSWKTMGALLNTIGKSIGAVGNIIVILGIIVYMFAVVGMQMFRDK 632
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIY 76
++ +R + + H F FI+ I + + ++ + PT+++ F +
Sbjct: 984 WHSLRYNLLLFIEHKYFEFFILVMIGISSLTLVFEDIHLDSQPTLKAILSYMNYTFAVTF 1043
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALK 136
T E +K++ G + Y + WN LD ++A++ ++ + NL A R+ R L L+
Sbjct: 1044 TVEMLLKLLGFGIV----GYFSNLWNCLDSFIVAISLASISGN-ENLNAFRSLRALHPLR 1098
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ G+K +V +++ +V + +V+++ M +FA++G Q GK
Sbjct: 1099 AISRFEGMKIVVNSLVHAVPAISNVLLVCMIFWLIFAIIGYQLFGGK 1145
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 31 RVAIYILVHPL-FSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAV 82
R ++ L+H F + I+ I+TN + M++ E ++ IFTGI+ E+ +
Sbjct: 1306 RAWVFDLIHQRKFEVMIMAVIMTNMVTMMLQHHNQSEDFKIALVDLNYIFTGIFVVEACI 1365
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIA----------LAYVTMGIDLGNLAALRTFRVL 132
+++A Y + AWN DF+++ + + M G L +R FR+
Sbjct: 1366 RLIAL-----RLDYFKQAWNLFDFVIVIFSIIGIILDDVMKIKMSFSPGLLRVVRVFRIG 1420
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R L+ G++ ++ A+++S+ L ++ L + ++A++G+
Sbjct: 1421 RLLRFFEGAKGVRRLLFALVKSLPGLVNIATLLFLIIFIYAIIGM 1465
>gi|332816430|ref|XP_003309747.1| PREDICTED: sodium channel protein type 11 subunit alpha isoform 1
[Pan troglodytes]
Length = 1793
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + I+RFSA AL++ PF+ IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFSSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1046 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVRLENQPKIQELLNCTDIIFTHIFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1106 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1160
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1161 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1204
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|397511550|ref|XP_003826134.1| PREDICTED: sodium channel protein type 11 subunit alpha isoform 1
[Pan paniscus]
Length = 1792
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + I+RFSA AL++ PF+ IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFSSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1046 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVRLENQPKIQELLNCTDIIFTHIFILE 1105
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1106 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1160
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1161 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1204
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>gi|195567118|ref|XP_002107117.1| GD15747 [Drosophila simulans]
gi|194204518|gb|EDX18094.1| GD15747 [Drosophila simulans]
Length = 306
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/94 (96%), Positives = 92/94 (97%)
Query: 85 MARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGL 144
MARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGL
Sbjct: 1 MARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGL 60
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 61 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 94
>gi|365767363|gb|AEW90239.1| voltage-gated sodium channel Nav2.1, partial [Clytia hemisphaerica]
Length = 2018
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Query: 11 IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV 70
++RFS +LW P NPIR++ IY++ + +F F+I TIL NC+ + + P E E
Sbjct: 190 VYRFSKAKSLWAFGPTNPIRKIIIYLITNQIFEFFVILTILVNCVFLALNDAP--EEAEY 247
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG-NLAALRTF 129
FT IYT E +K++A+GF+L +F YLRD WNWLDF+V+ L YVT+ + N +RTF
Sbjct: 248 FFTAIYTTEMVLKIIAKGFVLHNFAYLRDPWNWLDFVVVLLGYVTLAPTITVNFHGIRTF 307
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLRAL+T++ + GLKT+V A+++S++ L DV+ILT F L VFAL+GLQ
Sbjct: 308 RVLRALRTISAIEGLKTMVNALLKSMRMLSDVLILTAFFLCVFALVGLQ 356
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 90/158 (56%), Gaps = 22/158 (13%)
Query: 39 HPLFSLFIITTILTNCILMI-----MPGTPTIEST----EVIFTGIYTFESAVKVMARGF 89
H F FI+ IL++ +++ +P P +++ ++F+ ++ E +K++ G
Sbjct: 1239 HKWFDSFILLLILSSSFVLVFEDIRLPERPQLQTALDILNIVFSVLFLIECILKIIGFGV 1298
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVTMGIDL------GNLAALRTFRVLRALKTVAIVP- 142
Y+++ WN LDFI+++++ ++ +D GNL LR+ R LRAL+ + V
Sbjct: 1299 A----GYIKNPWNLLDFIIVSISITSIVLDKSSDSDSGNLKTLRSLRTLRALRPLRAVSR 1354
Query: 143 --GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
G++ +V ++++++ ++ +V+++ + +F+++G+Q
Sbjct: 1355 WDGMRIVVNSLLKAIPSIGNVLLVCLVFWLIFSILGVQ 1392
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESAV 82
RR ++ P F L + IL N + + + ++ E + FTGI+ E +
Sbjct: 767 RRKVYRFVMSPWFELAVTIFILLNTVCLAIEHHNMDKNIEFVLQIANHVFTGIFILEMVL 826
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLAALRTFRVLRALK 136
K++A G I Y + WN D +V+ ++ V T+ D G+ +R+ R+ R LK
Sbjct: 827 KLIALGLI----GYTKSMWNIFDGLVVLMSIVDVIIEITIARDNGDFTIIRSLRLFRVLK 882
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ A+ S+ L ++ ++ + +FA++G +
Sbjct: 883 LAQSWSTMRLLLSAIGRSLNALGNLTLILGIIVYMFAVVGTK 924
>gi|119584948|gb|EAW64544.1| sodium channel, voltage-gated, type XI, alpha, isoform CRA_a [Homo
sapiens]
Length = 1776
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 93/191 (48%), Positives = 129/191 (67%), Gaps = 14/191 (7%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH------PLFSLFIITTILTNC 54
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH P ++FII T++ NC
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSYPFIAPFTNMFIIGTVIINC 149
Query: 55 ILMIM-----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+ M + + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI
Sbjct: 150 VFMATGPAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVI 209
Query: 110 ALAYVTM--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMF 167
+A V+ GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F
Sbjct: 210 GIAIVSYIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFF 268
Query: 168 SLSVFALMGLQ 178
LS+FAL+G Q
Sbjct: 269 CLSIFALVGQQ 279
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1051 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1110
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1111 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1165
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1166 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1209
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 572 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 631
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG---IDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 632 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 687
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 688 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 727
>gi|440901585|gb|ELR52497.1| Sodium channel protein type 11 subunit alpha, partial [Bos
grunniens mutus]
Length = 1849
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 132/193 (68%), Gaps = 15/193 (7%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP------LFSLFIITTILTNC 54
TF+V++K + I+RFSA AL++L PFN IR +AI I VH ++FII T++ NC
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNSIRSLAIRISVHSYPFVASFTNMFIICTVIINC 149
Query: 55 ILMIMPGTPT-----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI 109
+ M + + + E +F GIY FE+ VK++ARGFIL+ F++LRD WNWLD IVI
Sbjct: 150 VFMALAHQKSSIDVKTDHAEYVFLGIYLFEALVKILARGFILDEFSFLRDPWNWLDSIVI 209
Query: 110 ALAYVTMGIDLGN----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILT 165
A A+V+ + + L++LRTFRV RALK ++++ GLK IVGA++ SVK L DV+IL
Sbjct: 210 ATAFVSYSPYINDSSFSLSSLRTFRVFRALKAISVISGLKVIVGALLHSVKKLVDVMILA 269
Query: 166 MFSLSVFALMGLQ 178
+F LS+FAL+G Q
Sbjct: 270 LFCLSIFALVGQQ 282
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + ++ + P I+ T+ IFT I+ E
Sbjct: 1132 LRKTCYQIVKHSWFESFIIFVILLSSGALVFEDINLDKQPKIQELLKCTDTIFTYIFILE 1191
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDF+++ ++ VT IDL L + R R LR L+ ++
Sbjct: 1192 MGLKWVAFGFR----KYFTSVWCWLDFVIVIVS-VTSLIDLMGLKSFRILRALRPLRALS 1246
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ G+
Sbjct: 1247 QFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGVSLFSGR 1290
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFT 73
W LD I++V ++ P L I I+ N + + M ++ E ++FT
Sbjct: 647 WWLD----IKKVLRTVMTDPFTELAITICIIINTVFLAMEHYKMDQNFENILYTGNLVFT 702
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV-------IALAYVTMGIDLGNLAAL 126
GI+ E +K++A L+ + Y R WN D +V + L ++ G + +L
Sbjct: 703 GIFMAEMCLKIIA----LDPYHYFRRGWNIFDSVVALLSLADVILNHIVSGKSWISFHSL 758
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R RV + K+ + L I+G + ++ NL V+ + +F +F+++G+Q
Sbjct: 759 RVLRVFKLAKSWPTLSTLIKIIGHSVGALGNLTVVLAIVVF---IFSVVGMQ 807
>gi|662385|dbj|BAA04133.1| voltage-gated sodium channel [Halocynthia roretzi]
Length = 2049
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 124/191 (64%), Gaps = 15/191 (7%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T+VV K K I+RFS AL+ L P NP+RR+A I +H +F+ I+ TIL NC M
Sbjct: 92 TYVVFDKNKVIYRFSCEKALFCLGPLNPVRRIANMIYIHSVFNSVIMLTILVNCGFMAY- 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
++ E F IYTFE+ VK+ +RGFIL SFTYLRD WN LD VI AY+ + + L
Sbjct: 151 -GEDVDIVEKTFLAIYTFEAVVKIFSRGFILSSFTYLRDPWNILDISVIFTAYLDIVMAL 209
Query: 121 GN-------------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMF 167
+AALR FRVLRALK ++ +PGLK IV A+IESVK L+DV+ILT+F
Sbjct: 210 AQKASDGGKAQKIPGMAALRAFRVLRALKAISAIPGLKAIVAALIESVKALKDVMILTLF 269
Query: 168 SLSVFALMGLQ 178
LSVFAL+GLQ
Sbjct: 270 CLSVFALIGLQ 280
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W +N I ++ I P LFI I+ N M P ES
Sbjct: 770 YKFTNIFCIWNCCGAWNYIHKICKIICEDPFLDLFITICIIVNTAFMTAEYQPMEESYAR 829
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGN 122
++FT I+T E +KV+ ++ F Y +D WN D ++++ + + + +G
Sbjct: 830 ILEVANLVFTVIFTAEMVLKVVG----MQPFQYFQDPWNCFDSVIVSFSLLEYALQSVGG 885
Query: 123 LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LRTFR++R K P L I+G + S+ NL ++I+ +F +FA++G+Q
Sbjct: 886 LSVLRTFRLMRVFKLAKSWPTLNMLIKIIGNSMGSLGNLTLILIIVLF---IFAVVGMQ 941
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R++ I+ H F FII I+ + + ++ + IFT ++ FE
Sbjct: 1250 MRKICYRIIEHAWFESFIILMIMLSSGALAFEDVYLKDKIGLQRVLKYADRIFTYVFIFE 1309
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GID-LGNLAALRTFRVLR 133
+K + GF Y +AW WLDF+++ ++ +++ G+D +G++ +LRT R LR
Sbjct: 1310 MLLKWVGYGFK----KYFTNAWCWLDFLIVGVSLISLIAEALGMDQIGSIRSLRTLRALR 1365
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G+K +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1366 PLRAMSRFRGMKVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNFFAGK 1415
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 38/200 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P P+ R I+VH F + I+ I+TN
Sbjct: 1548 GQDIFMTEEQRKYYNAMKKLGSKQPQKPVPRPKNELQAWVFDIVVHQTFEIAIMILIVTN 1607
Query: 54 CILMI-----MPGT--PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
M+ MP +E +F I+T E +K A F Y ++ WN DF
Sbjct: 1608 MFTMMIEYHDMPKNLMDVLEYINYVFIAIFTGECLLKWCAL-----RFYYFKNPWNVFDF 1662
Query: 107 IVIALAYV--TMGIDLGN-------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN 157
IV+ L+ V TM + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1663 IVVILSVVGSTMNEVIKQYFLQPTLFRIIRLARIGRILRLIRGAKGIRTLLFALMMSLPA 1722
Query: 158 LRDV---IILTMFSLSVFAL 174
L ++ ++L MF S+F +
Sbjct: 1723 LFNIALLLVLVMFIYSIFGM 1742
>gi|407813863|gb|AFU35097.1| voltage-gated sodium channel alpha subunit, partial [Tetranychus
urticae]
Length = 1806
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/112 (79%), Positives = 100/112 (89%), Gaps = 1/112 (0%)
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAAL 126
TE+IFT IYTFES +KV ARG IL +FTYLRD WNWLDF+VIALAY+TM DLGNL+AL
Sbjct: 1 TEIIFTTIYTFESCLKVTARGLILTNFTYLRDPWNWLDFVVIALAYLTMLFEDLGNLSAL 60
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RTFRVLRALKTVA+VPGLKTIVGA+IE+ KNL+DV ILT FSLSVFAL+GLQ
Sbjct: 61 RTFRVLRALKTVAVVPGLKTIVGALIEAAKNLKDVTILTCFSLSVFALLGLQ 112
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTIEST----E 69
A W+ + +R ++ F +IT IL + + + + P +E + +
Sbjct: 1257 AFWI--KWREVRSKCYKLVEDKYFETLVITLILISSMTLALEDVNLKERPWLEYSLKYID 1314
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA----- 124
FT I+T E +K A GF +Y +AW WLDFI++ ++ + +G + LA
Sbjct: 1315 QFFTIIFTCEMLLKWFAYGFK----SYFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAF 1370
Query: 125 -ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R R L+ ++ G++ +V A+I+++ + +V+++ + +FA+MG+Q GK
Sbjct: 1371 KTMRTLRAFRPLRAMSRSKGMRVVVNALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGK 1430
Query: 184 KS 185
S
Sbjct: 1431 FS 1432
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESA 81
I+ + I+ P LFI I+ N + M M P E+ + F+ + E+
Sbjct: 616 IQELFALIVFDPFMELFITLCIVVNTLFMAMDHHDMDPDFENVLKTGNLFFSATFAIEAF 675
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
+K++A I F Y R+ WN DFI++AL+ + + ++ + L+ LR+FR+LR K
Sbjct: 676 MKLIA---ISPKF-YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKS 731
Query: 141 VPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L TI+G + + NL V+ + +F +FA+MG+Q
Sbjct: 732 WPTLNLLITIMGKTLGDLGNLTFVLAIIVF---IFAVMGMQ 769
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LGN 122
+E + F ++T E +K+ A F Y R+ WN DF+++ L+ + + + N
Sbjct: 1629 LEMCNLFFIAVFTAECMLKIFAL-----RFHYFREPWNVFDFVIVILSIASSALKDFVEN 1683
Query: 123 -------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L +R ++ R L+ V G++T++ A+ S+ L ++ +L + ++A+
Sbjct: 1684 YLISPTLLRVVRVVKIGRVLRLVKGARGIRTLLFALAMSLPALFNICLLLFLVMFIYAIF 1743
Query: 176 GL 177
G+
Sbjct: 1744 GM 1745
>gi|198436124|ref|XP_002123673.1| PREDICTED: similar to sodium channel, voltage-gated, type III,
alpha [Ciona intestinalis]
Length = 2329
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 127/193 (65%), Gaps = 15/193 (7%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+++ + I+RFSAT AL++ N +RR+A +LVH LF+ I+ TIL NCI M M
Sbjct: 91 TFIILDQNYVIYRFSATRALYLFGALNIMRRIACRVLVHSLFNSIIMVTILVNCIFMTMD 150
Query: 61 GTPT---IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV--- 114
T + E +F GIYTFE VK+++RGFI SFTY+RD WN LD VI AY+
Sbjct: 151 TTDKDWVNDYVERVFLGIYTFEMVVKLLSRGFIFSSFTYMRDPWNLLDVSVIFAAYLDIV 210
Query: 115 --TMGIDLGN-------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILT 165
M G +AALR FRVLRALK ++ +PGLK IV A+IESVK L+DV+ILT
Sbjct: 211 MAAMATSSGGSAQKIPGMAALRAFRVLRALKAISAIPGLKAIVSALIESVKALKDVMILT 270
Query: 166 MFSLSVFALMGLQ 178
+F LSVFAL+GLQ
Sbjct: 271 LFCLSVFALIGLQ 283
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 13/185 (7%)
Query: 8 GKDIFRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE 66
G +RF+ +W ++ +++ +I P F LFI I+ N + + P E
Sbjct: 859 GDCWYRFTDMFCIWNCCGCWSKFQKIMRFICDDPFFDLFITICIVANTTFLALEQYPMGE 918
Query: 67 S-------TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
S + FT I+T E +K++ L+ F Y ++ WN D I++A + + +
Sbjct: 919 SLDNVLKLANIFFTSIFTAELVIKMVG----LQPFYYFQETWNCFDSIIVAASLLEFPLQ 974
Query: 120 -LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L L+ LR+FR++R K P L ++ + S+ +L +++++ L +FA++G+Q
Sbjct: 975 GLNGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSMGSLGNLVLILFILLFIFAVVGMQ 1034
Query: 179 DSRGK 183
R K
Sbjct: 1035 LFREK 1039
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 88/169 (52%), Gaps = 19/169 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFES 80
R++ I+ H F +FII IL + + ++ + IFT ++ FE
Sbjct: 1351 RKICFRIVEHTWFEMFIIMMILLSSGALAFEDVHFRDRKALRQVLKYADRIFTYVFIFEM 1410
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGID-LGNLAALRTFRVLRA 134
+K + GF Y +AW WLDF ++ ++ + +G+D + ++ +LRT R LR
Sbjct: 1411 LLKWVGYGFK----KYFTNAWCWLDFFIVGVSIIGLVAEALGMDKISSIRSLRTLRALRP 1466
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G+K +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1467 LRAMSRFEGMKVVVNALIGAIPSIVNVLLVCLIFWMIFSIMGVNLFAGK 1515
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P P+ R I+ H +F + I+ I+ N
Sbjct: 1648 GQDIFMTEEQRKYYNAMKKLGSKKPQKPVPRPKNKLQAWVFDIVTHQMFEITIMLLIVAN 1707
Query: 54 CILMIMPG---TPTIES----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ +PT ES +F I+T E+ +K+ A Y ++ WN DF
Sbjct: 1708 MVTMMIETHDMSPTFESILEYVNYVFVAIFTGEALIKMFAL-----RHHYFKNPWNVFDF 1762
Query: 107 IVIALAYVTMGIDLGNLAA-----------LRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
IV+ L+ + G + L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1763 IVVILSII--GSTMSELINKYFVQPTLFRIIRLARIGRILRLIKGAKGIRTLLFALMMSL 1820
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ +IL MF S+F +
Sbjct: 1821 PALVNIGLLLILVMFIYSIFGM 1842
>gi|198424768|ref|XP_002122104.1| PREDICTED: similar to Sodium channel protein type 5 subunit alpha
(Sodium channel protein type V subunit alpha)
(Voltage-gated sodium channel subunit alpha Nav1.5)
(Sodium channel protein cardiac muscle subunit alpha)
[Ciona intestinalis]
Length = 2697
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 88/187 (47%), Positives = 123/187 (65%), Gaps = 9/187 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
T++VV+ IFRFS ++L++ + +R AI + + P+FS FI+ IL NC M++
Sbjct: 212 TYIVVNDQGSIFRFSKAESLFLFGQESRLRNAAINLFIKPMFSNFIMLVILFNCACMVLE 271
Query: 61 GTP--TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E +FT IY E+ VK+ ARGF+L SF+YLRD WNWLDFIVI A T +
Sbjct: 272 NPPHWVDDYLEYVFTAIYIAEATVKITARGFVLHSFSYLRDPWNWLDFIVIVSALATEIL 331
Query: 119 D-------LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
LG +A LRTFRVLRALKT+++VPGL+ IV A++ S+ L+D + LT+F +SV
Sbjct: 332 KAIVRSTMLGQIAVLRTFRVLRALKTMSVVPGLRGIVKALLRSIHALKDAVALTVFCVSV 391
Query: 172 FALMGLQ 178
FAL+G Q
Sbjct: 392 FALIGYQ 398
Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEVIFTGIY 76
P+ +R I++H F +I IL + + + M P + IF I+
Sbjct: 1877 PWFEMREFMHKIIIHRYFENIVIFCILLSTVTLAMEDIHIDKRPAMKKVVHIIDIFCCIF 1936
Query: 77 -TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTF 129
T E +K + +G +Y + W LDF ++ ++ V + + D L ALRTF
Sbjct: 1937 FTVEMLMKWIGKGL----RSYFTNPWCCLDFFIVLVSLVNIFMASNQRADFSALRALRTF 1992
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R LR L+ ++ G+K +V A+I +V ++ V + M +F+++G+
Sbjct: 1993 RALRPLRALSRFQGMKIVVDALIRAVPSITHVFFICMIFWLIFSILGV 2040
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYTF 78
++ I+R I+++P L I I N + M + P +++ V FT ++T
Sbjct: 1329 WSKIQRKVRRIVLNPFTDLLITLCIALNTLFMSLEQHPMEAWFAKILDNANVFFTIVFTV 1388
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKT 137
E +K++ L +TY + WN D +V+ + + + ++ L+ R FR++R LK
Sbjct: 1389 EMLMKIIG----LSPYTYFNERWNVFDAVVVLFSLLELLLNSTQGLSVFRAFRLMRILKL 1444
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + +++ L + ++ L +FA++G+Q
Sbjct: 1445 AKQWPTLNKLLRIIGKTLGQLWHLTLVLFLVLFIFAVVGMQ 1485
>gi|345311657|ref|XP_003429137.1| PREDICTED: sodium channel protein type 5 subunit alpha-like
[Ornithorhynchus anatinus]
Length = 1852
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 131/184 (71%), Gaps = 2/184 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VV++ + I+RFSA AL+VL PFN +RRVA+ I VH LFS+FII T+ NC M
Sbjct: 87 TFMVVNRKRTIYRFSAKPALFVLSPFNSLRRVAVAISVHALFSMFIICTVTVNCAFM-AS 145
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-D 119
T ++ +++F IY E+ +K++ARGF+L+ F++LRD WN LDF VI +A ++ +
Sbjct: 146 ATGLNKTADLVFNSIYLSEALIKILARGFLLDEFSFLRDPWNVLDFFVITVAILSYSFKE 205
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+ ++ LR FRVLRALK ++++ GLK IVGA++ SVK L DV+IL +F LS+FAL+ LQ
Sbjct: 206 VDGISTLRMFRVLRALKAISVISGLKVIVGALLRSVKKLMDVMILMIFCLSIFALIALQL 265
Query: 180 SRGK 183
+G
Sbjct: 266 FKGN 269
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES---------TEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + ++ ++ T+ +FT I+ E
Sbjct: 1077 LRKTCYRIVHHSWFESFILFVILLSSGTLVFEDYYLCQNENIQKLLTFTDQVFTYIFVLE 1136
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-LAALRTFRVLRALKTV 138
+K + GF Y W WLDF+++++A + M + GN +LRT + LR L+ +
Sbjct: 1137 MLLKWVVYGFK----KYFTSMWCWLDFLIVSVANLVMENNGGNAYKSLRTLKALRPLRAL 1192
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1193 SRFEGMKVVVNALLGAIPAIMNVLLVCLIFWLIFCILGVNLFAGK 1237
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
+++ P L I I+ N + M + +P++++T +FT I+T E +K++A
Sbjct: 575 VVMDPFADLVITLCIVLNTLFMALEHYDMSPSLQATLNTGNNVFTAIFTIEMCLKIIA-- 632
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAALRTFRVLRALKTVAIVPGLK 145
L+ + Y R WN D V+ L+++ +G+ NL LR+ R+LR K P L
Sbjct: 633 --LDPYYYFRRPWNIFDSFVVMLSFIELGLGYIIKNNLLLLRSLRLLRVFKLAKSWPTLN 690
Query: 146 TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
T++ + SV L ++ ++ + +FA+ G+Q
Sbjct: 691 TLIKIIGNSVGALGNLTLVLAIIVFIFAVFGMQ 723
>gi|342837671|tpg|DAA34925.1| TPA_inf: voltage-dependent sodium channel SCN11A [Ornithorhynchus
anatinus]
Length = 1793
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 130/183 (71%), Gaps = 5/183 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+VV++ + I+RFSA AL+VL PFN +RRVA+ I VH LFS+FII T+ NC M
Sbjct: 87 TFMVVNRKRTIYRFSAKPALFVLSPFNSLRRVAVAISVHTLFSMFIICTVTVNCAFM-AS 145
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
T ++ +++F IY E+ +K++ARGF+L+ F++LRD WN LDF VI +A+ ++
Sbjct: 146 ATGLNKTADLVFNSIYLSEALIKILARGFLLDEFSFLRDPWNVLDFFVITVAFK----EV 201
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LR FRVLRALK ++++ GLK IVGA++ SVK L DV+IL +F LS+FAL+ LQ
Sbjct: 202 DGISTLRMFRVLRALKAISVISGLKVIVGALLRSVKKLMDVMILMIFCLSIFALIALQLF 261
Query: 181 RGK 183
+G
Sbjct: 262 KGN 264
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES---------TEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + ++ ++ T+ +FT I+ E
Sbjct: 1068 LRKTCYRIVHHSWFESFILFVILLSSGTLVFEDYYLCQNENIQKLLTFTDQVFTYIFVLE 1127
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTMGIDLGN-LAALRTFRVLRALK 136
+K + GF Y W WLDF+++ ++A + M + GN +LRT + LR L+
Sbjct: 1128 MLLKWVVYGFK----KYFTSMWCWLDFLIVNVSVANLVMENNGGNAYKSLRTLKALRPLR 1183
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1184 ALSRFEGMKVVVNALLGAIPAIMNVLLVCLIFWLIFCILGVNLFAGK 1230
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
+++ P L I I+ N + M + +P++++T +FT I+T E +K++A
Sbjct: 619 VVMDPFADLVITLCIVLNTLFMALEHYDMSPSLQATLNTGNNVFTAIFTIEMCLKIIA-- 676
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GNLAALRTFRVLRALKTVAIVPGLK 145
L+ + Y R WN D V+ L+++ +G+ NL LR+ R+LR K P L
Sbjct: 677 --LDPYYYFRRPWNIFDSFVVMLSFIELGLGYIIKNNLLLLRSLRLLRVFKLAKSWPTLN 734
Query: 146 TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
T++ + SV L ++ ++ + +FA+ G+Q
Sbjct: 735 TLIKIIGNSVGALGNLTLVLAIIVFIFAVFGMQ 767
>gi|189239566|ref|XP_975663.2| PREDICTED: similar to putative BSC1 sodium channel protein
[Tribolium castaneum]
Length = 2283
Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+AT++ + PF+ +R+ IY+ + F ++ TIL NC+ +
Sbjct: 162 TFCVVSKRFRKNYIHRFTATNSFFFFSPFSSVRKACIYLSTNQYFDYLVMATILLNCVFL 221
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M TIE E IF IYT E +K +A+GFIL +TYLR+ WNWLDF+VI Y T+G
Sbjct: 222 AM--AETIEEAEYIFLAIYTAEMIIKSIAKGFILNKYTYLRNPWNWLDFVVITSGYATIG 279
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKT++I+PGLKTI+ A++ S K L +V+ LT+F L VFAL L
Sbjct: 280 MEVGNLAGLRTFRVLRALKTISILPGLKTIINALLHSFKQLAEVMTLTIFCLMVFALFAL 339
Query: 178 QDSRGK 183
Q +G+
Sbjct: 340 QVYKGE 345
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
IR + + ++ P F FI+ I + + + + +P ++S T + F+ I+ E
Sbjct: 1289 IRTMVLRVVDTPGFEWFILVLIFASSVTLCFEDIHLDESPDLKSVLYWTNLAFSIIFIIE 1348
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN----LAALRTFRVLRAL 135
+K +A GF Y W LDF+++ ++ ++ I+ L +LRT R LR L
Sbjct: 1349 MLLKWIALGF----HKYFTSFWTLLDFLIVFVSLFSLLIEENENLRVLRSLRTLRALRPL 1404
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+Q RGK
Sbjct: 1405 RAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFRGK 1452
>gi|407813865|gb|AFU35098.1| voltage-gated sodium channel alpha subunit, partial [Tetranychus
urticae]
Length = 1806
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/112 (78%), Positives = 100/112 (89%), Gaps = 1/112 (0%)
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAAL 126
TE+IFT IYTFES +KV ARG IL +FTYLRD W+WLDF+VIALAY+TM DLGNL+AL
Sbjct: 1 TEIIFTTIYTFESCLKVTARGLILTNFTYLRDPWDWLDFVVIALAYLTMLFEDLGNLSAL 60
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RTFRVLRALKTVA+VPGLKTIVGA+IE+ KNL+DV ILT FSLSVFAL+GLQ
Sbjct: 61 RTFRVLRALKTVAVVPGLKTIVGALIEAAKNLKDVTILTCFSLSVFALLGLQ 112
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 21/182 (11%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTIEST----E 69
A W+ + +R ++ F +IT IL + + + + P +E + +
Sbjct: 1257 AFWI--KWREVRSKCYKLVEDKYFETLVITLILISSMTLALEDVNLKERPWLEYSLKYID 1314
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA----- 124
FT I+T E +K A GF +Y +AW WLDFI++ ++ + +G + LA
Sbjct: 1315 QFFTIIFTCEMLLKWFAYGFK----SYFSNAWCWLDFIIVMVSALNLGAEFAGLAKIQAF 1370
Query: 125 -ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+RT R R L+ ++ G++ +V A+I+++ + +V+++ + +FA+MG+Q GK
Sbjct: 1371 KTMRTLRAFRPLRAMSRSKGMRVVVNALIQAIPAIFNVLLVCLIFWLIFAIMGVQLFAGK 1430
Query: 184 KS 185
S
Sbjct: 1431 FS 1432
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESA 81
I+ + I+ P LFI I+ N + M M P E+ + F+ + E+
Sbjct: 616 IQELFALIVFDPFMELFITLCIVVNTLFMAMDHHDMDPDFENVLKTGNLFFSATFAIEAF 675
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
+K++A I F Y R+ WN DFI++AL+ + + ++ + L+ LR+FR+LR K
Sbjct: 676 MKLIA---ISPKF-YFREGWNVFDFIIVALSLLEIFLEGVRGLSVLRSFRLLRVFKLAKS 731
Query: 141 VPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L TI+G + + NL V+ + +F +FA+MG+Q
Sbjct: 732 WPTLNLLITIMGKTLGDLGNLTFVLAIIVF---IFAVMGMQ 769
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LGN 122
+E + F ++T E +K+ A F Y R+ WN DF+++ L+ + + + N
Sbjct: 1629 LEMCNLFFIAVFTAECMLKIFAL-----RFHYFREPWNVFDFVIVILSIASSALKDFVEN 1683
Query: 123 -------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
L +R ++ R L+ V G++T++ A+ S+ L ++ +L + ++A+
Sbjct: 1684 YLISPTLLRVVRVVKIGRVLRLVKGARGIRTLLFALAMSLPALFNICLLLFLVMFIYAIF 1743
Query: 176 GL 177
G+
Sbjct: 1744 GM 1745
>gi|355559772|gb|EHH16500.1| hypothetical protein EGK_11788 [Macaca mulatta]
Length = 1810
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M P + E FT IYTFES VK++ARGF L +FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI +AY T +DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
+LT+F LSVFAL+GLQ
Sbjct: 121 VLTVFCLSVFALIGLQ 136
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1006 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1065
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1066 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1121
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1122 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1171
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 572 IKQGVKLVVMDPFADLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 631
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 632 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 687
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 688 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 725
>gi|2791841|gb|AAB96953.1| putative voltage-gated sodium channel [Aiptasia pallida]
Length = 1810
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK--GKD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TFVVV+ GK ++RF+ +L++ P +PIR+ I + + F FI+ TI+ NCI +
Sbjct: 71 TFVVVASRFGKQYVYRFNKAKSLYLFGPLHPIRKAVILFITNQFFEFFILLTIIVNCIFL 130
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ P E E +F IYTFE +K++A+G ++ + YLRD WNWLDF+V+ L YVT+
Sbjct: 131 ALRDAP--EQPEYVFAAIYTFEMLLKIIAKGLVMHEYAYLRDPWNWLDFVVVILGYVTLV 188
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++ NL+ +R FRVLRAL+T++ V GLKT+V A+++S+K L DV+ILT F L VFAL+G+
Sbjct: 189 PNVANLSGIRIFRVLRALRTISAVEGLKTMVNALLKSMKMLSDVLILTTFFLCVFALVGM 248
Query: 178 Q 178
Q
Sbjct: 249 Q 249
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-------TIESTEVIFTGIYTF 78
+N IRR+ I++H FI + N + + + +E +FT ++
Sbjct: 609 WNRIRRMISKIVLHGYMDTFITFCTMVNTLFLSLEYHNMDSNYLMVLEIGNKVFTMVFLL 668
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL------GNLAALRTFRVL 132
E +K+ A GF Y++ WN D ++ ++ V + ++L L+ LRTFR+L
Sbjct: 669 EMILKITAFGFK----GYIKSRWNIFDGFIVVISMVDLMVELLVDDHDSGLSVLRTFRLL 724
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R K + ++ + SV L ++ ++ + + A++G+Q
Sbjct: 725 RVFKLAQSWQTMNMLLSTIARSVGQLGNLTLVLGIVIYMLAVVGVQ 770
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 24/153 (15%)
Query: 42 FSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGFILESF 94
F I+ I N ++M++ P +E ++FTG++T E+ +++ ++
Sbjct: 1370 FETLIMFFICLNILVMMIQHYGQKPAVEQALMIINLVFTGLFTLEAILRI-----VVLRL 1424
Query: 95 TYLRDAWNWLDFIVIALAYVTMGIDLGNLA----------ALRTFRVLRALKTVAIVPGL 144
Y R+ WN DF+++ L+ +GI L +L R FR+ R L+ G+
Sbjct: 1425 HYFREPWNVFDFVIVVLS--ILGIILEHLEYELFITPSPFVARVFRIGRLLRFYKGAKGI 1482
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ ++ A+I S+ L ++ L + ++A++G+
Sbjct: 1483 RRLLFALIISLPALLNIGALLFLIMFIYAIIGM 1515
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMI-----MPGTPTIEST----EVIFTGIYTFES 80
R+A+ V H F I+ I+ + I + +P P ++ + F ++ E
Sbjct: 1037 RLAVKKFVEHKYFEWTILAIIMASSIALTFEDINLPSRPKLKEYLQYLNIFFAVTFSIEF 1096
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNLAALRTFRVLR 133
+KV+ G + +Y R+ WN LD +++ + ++ L +L +LRT R LR
Sbjct: 1097 LLKVLGLGVV----SYFRNCWNCLDVLIVFVPVSSVIADSSNQDSSLSSLRSLRTLRALR 1152
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V +++ ++ + +V+++ M +F++MG+Q
Sbjct: 1153 PLRAISRWEGMRVVVNSLLFAIPGIGNVLLVCMVFWLIFSIMGVQ 1197
>gi|365767361|gb|AEW90238.1| voltage-gated sodium channel Nav2.5, partial [Hydra magnipapillata]
Length = 1594
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 122/170 (71%), Gaps = 2/170 (1%)
Query: 9 KDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIEST 68
+ +FRF +L++ + +RR+ IYIL H F +FI+ TI+TNC+ M + P + +
Sbjct: 6 QTVFRFCKEKSLFLFGTDSLVRRINIYILTHQYFEVFILLTIVTNCVFMALSHPPQL--S 63
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRT 128
E +F IYT E +K++A+GFIL ++YLR++WNWLDF+V+ + YVT+ + NL ++RT
Sbjct: 64 EYVFAAIYTIEMFIKILAKGFILHKYSYLRNSWNWLDFVVVVIGYVTLHPQINNLDSIRT 123
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
FRVLRALKT++ V GLK +V +++SVK + DV+ILT+F ++V AL+GLQ
Sbjct: 124 FRVLRALKTISTVKGLKAMVNTLLKSVKMMADVLILTLFFIAVLALIGLQ 173
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 27 NPIR------RVAIYILV-HPLFSLFIITTILTNCILMI-----MPGTPTIES----TEV 70
+PIR R +L+ H F ++ I + I ++ +P PT+++
Sbjct: 782 SPIRQLWHNARFKCQVLIEHKYFEAVVLFLICVSSITLVFEDVYLPSRPTLKTFLQYCNY 841
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFR 130
F I+T E +K+ A GFI Y + WN LD ++ ++ ++ NL LR+ R
Sbjct: 842 FFAFIFTLEFLIKLFALGFI----KYFTNFWNLLDIFIVTISLASL-FGSKNLKVLRSLR 896
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A+I S+ ++ +V+++ M + ++MG GK
Sbjct: 897 GLRPLRAISRFQGMKIVVNALISSIPSIANVLLVCMVFWLISSIMGYNLFGGK 949
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTF 78
+N + + I+ H LF FI I+ N +LM + T E +FTGI+ F
Sbjct: 384 YNKVHVLFYKIVSHSLFEGFITACIMLNTLLMALEHHNMSAKLTKITEIFNYVFTGIFIF 443
Query: 79 ESAVKVMA---RGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTF 129
E +K++ RG Y+++ WN D +++ L+ + + + G L L+ F
Sbjct: 444 EMMIKLVGYTPRG-------YVQNKWNLFDGVLVILSVIDILLLIFTTLPKGTLKMLKVF 496
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R++R LK + ++ + S+ L +V ++ + +F+++G+Q
Sbjct: 497 RLMRILKLAQSWKTMGQLISTIASSMGALVNVTVILGLIIYIFSVVGMQ 545
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 31 RVAIYILVH-PLFSLFIITTILTNCI-LMIMPGTPTIE------STEVIFTGIYTFESAV 82
R A++ + F FI++ IL N + +M+ ++E +FTGI+T E+ V
Sbjct: 1107 RAALFDFIQAKYFEFFIMSVILLNMVTMMLQHHHQSLEFDLALIYLNYLFTGIFTLEAIV 1166
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--------LGNLAALRTFRVLRA 134
+++A LE F Y N DFI++ L+ + I+ L A +R R R
Sbjct: 1167 RLIAMR--LEYFKY---GLNIFDFIIVCLSIAVIIIEKIKEDNNILPGFAVIRVCRFYRL 1221
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDV--------IILTMFSLSVFALMGLQDSRGK 183
L+ + G+K ++ +I+S L +V I + ++++F+ + LQ S K
Sbjct: 1222 LQFLPFTKGIKKLLYILIKSGPALFNVGFLVFLITFIYAVIAMNLFSNLKLQGSLTK 1278
>gi|350593563|ref|XP_003359594.2| PREDICTED: sodium channel protein type 3 subunit alpha-like,
partial [Sus scrofa]
Length = 700
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/113 (69%), Positives = 98/113 (86%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
++ E FTGIYTFES +K++ARGF L+ FT+LRD WNWLDF VI +AYVT + LGN++A
Sbjct: 108 KNVEYTFTGIYTFESLIKILARGFCLDDFTFLRDPWNWLDFSVIVMAYVTEFVSLGNVSA 167
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 168 LRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 220
>gi|9801832|emb|CAC03588.1| voltage-gated sodium channel [Rattus norvegicus]
Length = 152
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/113 (70%), Positives = 98/113 (86%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +DLGN++A
Sbjct: 9 KNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSA 68
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 69 LRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 121
>gi|8096345|dbj|BAA95896.1| sodium channel [Halocynthia roretzi]
Length = 2221
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 132/193 (68%), Gaps = 14/193 (7%)
Query: 1 TFVVVS---KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VV+ K I+RFSA++ ++L PFNP+RR+A+ I ++ F F++ TI+ NC +
Sbjct: 119 TFCVVTDRFSNKYIYRFSASNGFFLLSPFNPLRRLALRITINQFFDYFVMLTIIVNCAFL 178
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM- 116
+ IES E +FT IY+ E +K++ARGF+L FTYLRD WNWLDF+V+ LAYVT+
Sbjct: 179 AL-DDEIIES-EYVFTAIYSLEMIIKMLARGFVLNKFTYLRDLWNWLDFVVVVLAYVTII 236
Query: 117 -------GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
G + N++ LRTFRVLRA K+ IVPGLKTIV A+++S+K L +V+++ +F +
Sbjct: 237 STSVTPAGSNF-NVSGLRTFRVLRAFKSFTIVPGLKTIVNALLQSLKPLAEVMVIMIFLV 295
Query: 170 SVFALMGLQDSRG 182
V +L+ LQ +G
Sbjct: 296 VVISLIALQAYQG 308
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R +++LV H +F FI+ IL + + + M + E +FT ++T E
Sbjct: 1170 RYGVFLLVQHRIFEFFILAIILASTVCLAMEDIHLETDITRKNVLNILEYVFTSLFTLEM 1229
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----LGNLAALRTFRVLRALK 136
+K + GF Y + W LDF+++ +++V +G + +L ALRT R LR L+
Sbjct: 1230 VLKWIGNGFT----KYFTNWWCVLDFVIVVISWVGIGASAAGTVDSLRALRTLRALRPLR 1285
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ G++ +V A+I + ++ +V+ + + VF +MG+Q +G+
Sbjct: 1286 AISRWQGMRVVVNALIYCIPSIGNVLCVCLLIWLVFRIMGVQLYKGQ 1332
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 21 WVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES-------TEVIF 72
W P F ++ ++ +F II +ILTN + + + ++ ++F
Sbjct: 622 WECHPAFKKFQKFLFALISLKVFEGLIILSILTNTLFLALDHHEISQTFDEALSIGNLVF 681
Query: 73 TGIYTFESAVKVMARGFILESFTYLRDAWNWLDF--IVIALAYVTMGIDLGNLAALRTFR 130
T I+T E+ +K+ A G Y++D WN DF ++I+L VT L+ LRT R
Sbjct: 682 TAIFTAEAVLKIFALG----PAGYVKDKWNVFDFLIVIISLIEVTNITGDAGLSVLRTLR 737
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++R + I ++ ++ +I+S+ + + ++ L +FA++G Q
Sbjct: 738 LMRVFRLARIWQTMRKLMSIIIKSLSAVAYLTVVLFMVLFIFAVIGKQ 785
>gi|334329928|ref|XP_001375026.2| PREDICTED: sodium channel protein type 9 subunit alpha-like
[Monodelphis domestica]
Length = 1826
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 82/184 (44%), Positives = 129/184 (70%), Gaps = 1/184 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++G+ IFRFSAT AL++L PFN IRR+ I +LV+ LF++FI+ T L NCI + +
Sbjct: 72 TFLVLNEGRIIFRFSATSALYILTPFNLIRRLCIKVLVNFLFNMFIMGTFLINCIFLTLC 131
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
+PT I+S + F G+YTFE +K++ARGF + FT+L D WNW D ++ +AY+ + ++
Sbjct: 132 TSPTWIKSLNLPFLGLYTFEILIKILARGFCIGPFTFLSDPWNWFDIPILTMAYLRLFVN 191
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
LG+ L F VLR +K V++ G +++V + +S+K + ++L +F LSVFA+MG+Q
Sbjct: 192 LGSFPYLGIFSVLRIMKAVSLNIGPRSVVRTLTQSMKMFQQTVMLIVFCLSVFAVMGMQL 251
Query: 180 SRGK 183
GK
Sbjct: 252 FMGK 255
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ + H F + I+ +L +C +I +E +IFT I+ E
Sbjct: 1028 LRKTCYRTVNHGCFEISIVFIVLLSCFALIFEDIYIEKRKTIKIILEYGNMIFTYIFILE 1087
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K MA G+ TY + W WL+F+V+ ++ V + + + T + LR L+ ++
Sbjct: 1088 MLLKWMAYGYK----TYFSNVWCWLEFLVVNVSLVCLVANYLGYSEFGTLKSLRILRILS 1143
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
I G++ ++ ++++ ++ + +++ + +F+LMG+ GK
Sbjct: 1144 IYEGVRVVLHIFLKAIPSILEALLVWLICWLLFSLMGVNLFAGK 1187
>gi|297671690|ref|XP_002813973.1| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein type 11
subunit alpha [Pongo abelii]
Length = 1628
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 86/175 (49%), Positives = 120/175 (68%), Gaps = 8/175 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V++K + I+RFSA AL++ PFN IR +AI + VH LFS+FII+T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFIFGPFNSIRSLAIRVSVHSLFSMFIISTVIINCVFMATG 149
Query: 60 ----PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
GI + L LRTFRV RALK +++V LK IVGA++ SVK L + LT F+
Sbjct: 210 CIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVTXLXLTFFA 263
Score = 75.9 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1055 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTNIFILE 1114
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1115 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLKELKSFRTLRALRPLRALS 1169
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1170 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVHFFSGK 1213
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
I++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 576 IKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 635
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ ++ + LR+FRVLR K
Sbjct: 636 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMSCIFQKRSWPFLRSFRVLRVFKLA 691
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 692 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 731
Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYT 77
P N + + ++ +F + II+ I+ N I M+ T++ +F I+T
Sbjct: 1361 PLNKCQGLVFDVVTSQIFDIVIISLIILNMISMMAESYNQPKAMKSTLDHLNWVFVVIFT 1420
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAAL----RTFRVL 132
E +K+ F L + Y + WN D +V+ L+ V TM L N + FR++
Sbjct: 1421 LECLIKI----FALRQY-YFTNGWNLFDCVVVLLSIVSTMISTLENQEHIPFPPTLFRIV 1475
Query: 133 RALKTVAI 140
R +K A+
Sbjct: 1476 RLIKYSAL 1483
>gi|365812013|gb|AEX00070.1| voltage-gated sodium channel Nav2.1 [Nematostella vectensis]
Length = 1838
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 122/181 (67%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK--GKD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TFVVV+ GK ++RFS +L + P +P R+ I + + F FI+ TI+ NCI +
Sbjct: 71 TFVVVASRFGKQYVYRFSKEKSLCLFGPLHPFRKAVIVCITNQFFEFFILLTIIVNCIFL 130
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ P E E +F IYT E +K++A+GF+ + YLRD WNWLDF+V+ L YVT+
Sbjct: 131 AIKNAP--EEPEYVFAAIYTIEMFLKIIAKGFLFHEYAYLRDPWNWLDFVVVFLGYVTLI 188
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++ NL+ +RTFRVLRAL+T++ V GLKT+ A+++S+K L DV+ILT F L +FAL+G+
Sbjct: 189 PNVANLSGIRTFRVLRALRTISAVEGLKTMANALLKSMKMLSDVLILTTFFLCIFALVGM 248
Query: 178 Q 178
Q
Sbjct: 249 Q 249
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 32/176 (18%)
Query: 39 HPLFSLFIITTILTNCILMI-----MPGTPTIEST----EVIFTGIYTFESAVKVMARGF 89
H F I+ I + ++ +P P ++ ++F ++T E +K+ G
Sbjct: 1027 HKYFEWGILMIIFASSFALVFEDVHLPRRPILKKALDYLNILFAVVFTAEFLLKLFGLGV 1086
Query: 90 ILESFTYLRDAWNWLD--FIVIALAYV----TMGIDLGNLAA---LRTFRVLRALKTVAI 140
+ TY ++ WN LD +VI+LA V T NL+A LRT R LR L+ ++
Sbjct: 1087 V----TYFKNLWNCLDVLIVVISLATVISNETTSDGDSNLSAFRSLRTLRALRPLRAISR 1142
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ----------DSRGKKSD 186
G+K +V +++ ++ + +V+++ + +F++MG+Q D++G++ D
Sbjct: 1143 WEGMKVVVNSLLFAIPGIGNVLLVCLVFWLIFSIMGVQFFGGRFFKCVDAQGERVD 1198
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTP-------TIESTEVIFTGIYTFESAVKVMARG 88
+++ PLF FI I+ N + + + +E +FT I+ E K+MA G
Sbjct: 612 MIMDPLFDTFITGCIVLNTMFLTVEYHNMSSDLRLALEIGNKVFTTIFLLEMVFKLMAFG 671
Query: 89 FILESFTYLRDAWNWLDFIVIALAYV-------TMGIDLGNLAALRTFRVLRALKTVAIV 141
Y++ WN D ++ ++ V T G D G L+ LRTFR+LR K
Sbjct: 672 ----CRGYIKSRWNIFDGFIVTISIVDLIAEAATHGYDSG-LSVLRTFRLLRVFKLAQSW 726
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ ++ + SV L ++ ++ + + A++G+Q
Sbjct: 727 RTMNMLLSTIARSVGQLGNLTLVLGIVVYMLAVVGMQ 763
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 25/154 (16%)
Query: 42 FSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARGFILESF 94
F I+ I N I+M++ EV IFTG++T E+ ++++A L
Sbjct: 1353 FETLIMVMICLNIIVMMIQHYRQQHDVEVAMMIINLIFTGVFTLEAVLRIIA----LRQH 1408
Query: 95 TYLRDAWNWLDFIVIALAYVTMGIDLGNLA-----------ALRTFRVLRALKTVAIVPG 143
Y + WN DF ++ L+ +GI L L R FR+ R L+ G
Sbjct: 1409 -YFKQPWNIFDFTIVLLS--ILGIILEYLQYDLFITPSLFRVARVFRIGRLLRFYKGARG 1465
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++ ++ A++ S+ L ++ L + +++++G+
Sbjct: 1466 IRRLLFALVISLPALFNIGALLFLVMFIYSIIGM 1499
>gi|326922811|ref|XP_003207638.1| PREDICTED: sodium channel protein type 1 subunit alpha-like,
partial [Meleagris gallopavo]
Length = 292
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 95/107 (88%)
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +DLGN++ALRTFRV
Sbjct: 130 FTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRV 189
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 190 LRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 236
>gi|365812019|gb|AEX00073.1| voltage-gated sodium channel Nav2.4 [Nematostella vectensis]
Length = 1757
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK--GK-DIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
+F+V++ GK ++RF+ + +L++ P NPIR+ ++ ++ + F +F++ TIL NC+ +
Sbjct: 22 SFLVIAGKFGKTQVYRFNRSKSLYLFGPENPIRQFSLKLITNQYFEMFVLLTILVNCVFL 81
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M P E E +F IYT E K++A+GF L + YLRD WNWLDFIV+ L YVT+
Sbjct: 82 AMTNPP--EQPEYVFAAIYTIEMFCKIIAKGFALHRYAYLRDKWNWLDFIVVILGYVTIS 139
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
D+ NL+ +RTFRV RAL+T++ V GLK +V ++ S+K L DV++LT+F + +FAL+G+
Sbjct: 140 PDVANLSGIRTFRVFRALRTISAVKGLKAMVNTLLVSMKMLWDVMVLTLFFICIFALIGM 199
Query: 178 Q 178
Q
Sbjct: 200 Q 200
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GID-LGNLAAL 126
++F I+T E +K + GF TY + WN LDF+++ ++ T+ G D + + +L
Sbjct: 910 NILFAVIFTVEMLLKWIGLGFK----TYFTNPWNILDFVIVIVSLATIFGNDQIAFIRSL 965
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ---DSRGK 183
RT R R L+ ++ G+K ++ +++ ++ + +V+++ + +F++MG+Q GK
Sbjct: 966 RTLRAFRPLRAISRFEGMKVVITSLLHAIPGIGNVLLVCLMFWLIFSIMGVQIFGGKFGK 1025
Query: 184 KSDESHDK 191
DE +K
Sbjct: 1026 CVDEGGEK 1033
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 19/150 (12%)
Query: 43 SLFIITTILTNCILMIMPGTPTIE-------STEVIFTGIYTFESAVKVMARGFILESFT 95
+FII IL N ++M + P +E + +FT I+ E +K++A GF+
Sbjct: 520 EIFIIVCILLNTLVMSIE-HPRLEDPLLTVVNISTVFTFIFLLEMILKLIALGFL----G 574
Query: 96 YLRDAWNWLDFIVIALAYVTMGI-----DLGN--LAALRTFRVLRALKTVAIVPGLKTIV 148
Y+R AWN D IV+ ++ V + D G ++ LRTFR+LR LK + +++
Sbjct: 575 YIRVAWNIFDGIVVIISIVDFIVNKFVPDAGGTGISVLRTFRLLRVLKLAKSWSTMNSLL 634
Query: 149 GAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ +S+ L ++ ++ + +FA+MG+Q
Sbjct: 635 ATIGKSLGALGNLTVILAIIVYIFAVMGMQ 664
>gi|431921672|gb|ELK19024.1| Sodium channel protein type 8 subunit alpha [Pteropus alecto]
Length = 1353
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 98/114 (85%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA 124
I E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +DLGN++
Sbjct: 30 ISKREYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVS 89
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 90 ALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 143
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 594 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 653
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 654 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 709
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 710 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 765
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1057 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYVEQRKTIRTILEYADKVFTYIFILE 1116
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1117 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1172
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1173 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1222
>gi|9801812|emb|CAC03582.1| SCN3A [Homo sapiens]
gi|9801814|emb|CAC03583.1| SCN3A [Homo sapiens]
gi|9801826|emb|CAC03586.1| voltage-gated sodium channel [Homo sapiens]
Length = 121
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 98/113 (86%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT + LGN++A
Sbjct: 2 KNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVSLGNVSA 61
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 62 LRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 114
>gi|50897539|gb|AAT85832.1| voltage-gated sodium channel Nav1.6 [Homo sapiens]
Length = 542
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 99/113 (87%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +DLGN++A
Sbjct: 9 KNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSA 68
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 69 LRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 121
>gi|50897535|gb|AAT85830.1| voltage-gated sodium channel Nav1.6 [Homo sapiens]
Length = 531
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 99/113 (87%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +DLGN++A
Sbjct: 9 KNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSA 68
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 69 LRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 121
>gi|395519675|ref|XP_003763968.1| PREDICTED: sodium channel protein type 3 subunit alpha [Sarcophilus
harrisii]
Length = 1881
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 96/107 (89%)
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT ++LGN++ALRTFRV
Sbjct: 162 FTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRV 221
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 222 LRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1173 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1232
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1233 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1288
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1289 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1338
>gi|18073677|emb|CAC84529.1| Nav1.5 [Homo sapiens]
gi|18073679|emb|CAC84530.1| Nav1.5 [Homo sapiens]
gi|18073681|emb|CAC84531.1| Nav1.5 [Homo sapiens]
gi|18073683|emb|CAC84532.1| Nav1.5 [Homo sapiens]
gi|18073689|emb|CAC84535.1| Nav1.5 [Homo sapiens]
Length = 156
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 97/116 (83%)
Query: 63 PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN 122
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I LGN
Sbjct: 8 PWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIKLGN 67
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 68 LSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 123
>gi|994814|gb|AAA75572.1| sodium channel [Cyanea capillata]
Length = 1740
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 129/181 (71%), Gaps = 5/181 (2%)
Query: 1 TFVVVSK--GKD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TFVVV+ GK ++RFS +L+++ N R+V + I+ + +F +FI+ TI+TNC+ M
Sbjct: 101 TFVVVNNRLGKQTVYRFSTDKSLYLMGTNNLARKVFVRIVTNQIFEIFILLTIITNCVFM 160
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ P + +E +F IYTFE VK+ A+GFIL ++YLR++WNWLDF V+ + YVTM
Sbjct: 161 ALSDPP--KESEYVFAAIYTFEVIVKISAKGFILHKYSYLRNSWNWLDFFVVIVGYVTMI 218
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++ + ++TFRVLRALKT++ V GLK +V +++S++ + DV+ILT+F +++FAL+GL
Sbjct: 219 PEMNKYSGVKTFRVLRALKTISTVKGLKAMVNTLLKSMRMMTDVLILTLFFIAIFALIGL 278
Query: 178 Q 178
Q
Sbjct: 279 Q 279
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-- 122
++ F ++T E +K++ G I Y + WN LD ++A++ ++ GN
Sbjct: 998 LDYCNYFFAIVFTLEFIIKLIGFGVI----KYFTNLWNLLDVFIVAISLASL---FGNPD 1050
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L ALR+ R LR L+ V+ G+K +V +++ S+ ++ +V+++ +F++MG Q
Sbjct: 1051 LNALRSLRALRPLRAVSRFDGMKVVVNSLVHSIPSIANVLLVCGVFWLIFSVMGFQ 1106
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 26/166 (15%)
Query: 31 RVAIYILVHPL-FSLFIITTILTNCILMIMPGTPTIESTEV----------IFTGIYTFE 79
RV +YI V F FI I+ N I M E EV IFT I+ E
Sbjct: 500 RVIMYIFVGSTWFEGFITGCIMVNTIAM---AAEHFEQPEVMTKMSDILNYIFTSIFVIE 556
Query: 80 SAVKVMARGFILESFTYLRDAWNWLD-FIVIA------LAYVTMGIDLGNLAALRTFRVL 132
K++A L Y ++ WN D F+V+A L+ + + + +L+ +R FR+L
Sbjct: 557 MTCKLIA----LTPRGYAKNRWNLFDGFLVLASLFDLILSQLKL-VSGSSLSVMRVFRLL 611
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R LK + ++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 612 RVLKLAQSWKTMGQLLSTIGNSIGALGNITVILGIIIYIFAVVGMQ 657
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 24/156 (15%)
Query: 42 FSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARGFILESF 94
F LFI++ I+ N + M++ + EV +FTGI+T E+ ++++A
Sbjct: 1281 FELFIMSVIIANMLTMMIQHYDQTKEVEVALNYLNYLFTGIFTIEAIIRLVAM-----RL 1335
Query: 95 TYLRDAWNWLDF--IVIALAYV--------TMGIDL--GNLAALRTFRVLRALKTVAIVP 142
Y + N DF ++I++A + T +D G L +R FR+ R L+
Sbjct: 1336 EYFKSFMNIFDFTIVLISIAVIVYESSKSSTDNLDFSPGLLRVIRVFRLGRLLRFFDGAK 1395
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
G++ ++ +++S L ++ L + ++A+MG+
Sbjct: 1396 GIRQLLFTIVKSAPALLNIGTLLFLVMFIYAVMGMN 1431
>gi|50897537|gb|AAT85831.1| voltage-gated sodium channel Nav1.6 [Homo sapiens]
Length = 542
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/113 (69%), Positives = 99/113 (87%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++LGN++A
Sbjct: 9 KNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSA 68
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 69 LRTFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 121
>gi|444726987|gb|ELW67497.1| Sodium channel protein type 4 subunit alpha [Tupaia chinensis]
Length = 1582
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 96/111 (86%)
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALR 127
T FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +DLGN++ALR
Sbjct: 98 TRYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVILMAYVTEFVDLGNISALR 157
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
TFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 158 TFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 208
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 500 PWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFDSVLTVGNLVFTGIFT 559
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 560 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 615
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 616 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 657
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1012 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1071
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF + + + NWL + +LG + +LRT R LR L+ ++
Sbjct: 1072 MLLKWVAYGFKVSIISLVA---NWLGYS-----------ELGPIKSLRTLRALRPLRALS 1117
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1118 RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1161
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA------IYILV-HPLFSLFIITTILTN 53
GKDIF ++A L P PI R +Y V +F + I+ I N
Sbjct: 1295 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDIAIMILICLN 1354
Query: 54 CILMIMPGTPTIE-------STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + + ++F I+T E +K++A L + Y WN DF
Sbjct: 1355 MVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKMLA----LRQY-YFTVGWNIFDF 1409
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1410 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1467
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1468 PALFNIGLLLFLVMFIYSIFGMSN 1491
>gi|432112634|gb|ELK35350.1| Sodium channel protein type 2 subunit alpha [Myotis davidii]
Length = 1777
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 96/107 (89%)
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++LGN++ALRTFRV
Sbjct: 35 FTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVNLGNVSALRTFRV 94
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 95 LRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 141
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 985 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRRTIRTVLEYADKVFTYIFILE 1044
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1045 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLVANALGYSELGAIKSLRTLRALR 1100
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1101 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1150
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 31/176 (17%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 540 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 599
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 600 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 655
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+ I+G + ++ NL V+ + +F +FA++G+Q
Sbjct: 656 LSVLRSFRL---------------IIGNSVGALGNLTLVLAIIVF---IFAVVGMQ 693
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1304 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1363
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1364 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1416
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1417 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1469
>gi|449665142|ref|XP_002161696.2| PREDICTED: LOW QUALITY PROTEIN: sodium channel protein 1 brain-like
[Hydra magnipapillata]
Length = 1877
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
Query: 10 DIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE 69
+I+ F+ LW+ D NPIR+ AIYI+ + LF F+ITT++ NC+ + M P E E
Sbjct: 190 NIYWFNKEKTLWIFDISNPIRKWAIYIITNKLFDFFMITTVIINCLFLAMNNAP--EVAE 247
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTF 129
+FTGIYT E +K+ A+G +L + YLRD WN LDF+V+ L Y+T+ + NL+ + F
Sbjct: 248 YVFTGIYTLEMILKIFAKGLLLHHYAYLRDGWNILDFVVVVLGYITLLPGVANLSGISIF 307
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLRAL+T++ + GLKT+V A++ ++ + VIILT F + +FAL GLQ
Sbjct: 308 RVLRALRTISSIEGLKTMVNALLNAMAMMSSVIILTTFFVCIFALFGLQ 356
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 74/139 (53%), Gaps = 13/139 (9%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD--FIVIALA-----YV 114
+ +E +F ++ E +K+ A GF+ +LR+ WN + +++LA Y
Sbjct: 1099 SKMLEKCNTVFAILFLVEFFLKIFALGFV----KFLRNPWNSFETANAIVSLASVLNEYA 1154
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+ ++ + +LRT R LR L+ ++ G+K +V +++ ++ ++ +V ++ + +F++
Sbjct: 1155 RIITNVNAIRSLRTLRALRPLRAISHWKGIKIVVNSLLAAIPSIGNVFLVCILFWLIFSI 1214
Query: 175 MGLQDSRGK--KSDESHDK 191
+G+Q GK K H++
Sbjct: 1215 LGVQLFGGKFYKCINEHNE 1233
>gi|156400144|ref|XP_001638860.1| predicted protein [Nematostella vectensis]
gi|156225984|gb|EDO46797.1| predicted protein [Nematostella vectensis]
Length = 1478
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 126/193 (65%), Gaps = 7/193 (3%)
Query: 1 TFVVVSK-----GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI 55
TF+++SK G +RFS T +L L P +P+R I ++ HP F + + IL NCI
Sbjct: 17 TFLILSKRFNSSGYQAYRFSRTASLLCLGPVHPLRMFCILLITHPYFEIIVTLVILVNCI 76
Query: 56 LMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++ + P E E IFT IYT E K+++RGF+ +S+ YLRD WNWLD +V+ L+Y++
Sbjct: 77 ILGLNDPP--EEAEYIFTAIYTLEMICKIISRGFVKDSYAYLRDTWNWLDSLVVFLSYLS 134
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ D+ +L+ +RT RVLRA +T++ + GL+ +V +++ S+K L DV++L +FSL V AL+
Sbjct: 135 LAPDIASLSGIRTLRVLRAFRTISALKGLRAMVNSLLRSLKLLTDVLVLFLFSLCVLALI 194
Query: 176 GLQDSRGKKSDES 188
GLQ G+ ++
Sbjct: 195 GLQLFTGELRNKC 207
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 80/158 (50%), Gaps = 17/158 (10%)
Query: 39 HPLFSLFIITTILTNCILMI-----MPGTPTIEST----EVIFTGIYTFESAVKVMARGF 89
H F FI+ T++ + ++ + P +E +F I++ E +KV+ GF
Sbjct: 792 HRYFEWFILFTVMVSSFTLVFEDIHLHQKPDLERALNFLNFLFAAIFSLEFILKVIGFGF 851
Query: 90 ILESFTYLRDAWNWLDFIVIALAY-VTMGIDLGNLAALRTFRV---LRALKTVAIVPGLK 145
+ +Y WN LD +++++ V + NL+ R+FR LR L+ ++ + G+K
Sbjct: 852 V----SYFTSVWNCLDALIVSVCVSVACLFENPNLSVFRSFRTVRGLRPLRAISRLGGMK 907
Query: 146 TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ A+ ++ + V++++M +F++ G+Q GK
Sbjct: 908 VVINALFAAIPGIGSVLVVSMLFWLMFSISGVQLFAGK 945
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 42 FSLFIITTILTNCILMIMPGTPTIESTEVI----FTGIYTFESAVKVMARGFILESFTYL 97
F +FI+T I+ N +M++ T VI GI+ E+ +K++A Y
Sbjct: 1114 FEVFILTVIMCNMGMMMVQHYDQPPLTTVIGNYVLVGIFLLEAIIKIIAM-----RLHYF 1168
Query: 98 RDAWNWLDFIVIALAYVTMGIDL---------GNLAALRTFRVLRALKTVAIVPGLKTIV 148
+ AW+ DF+V+ + V M + + G L LR FRV R L+ V ++ ++
Sbjct: 1169 KKAWSIFDFVVVVSSIVGMYLGMSTESAVVSPGLLRVLRVFRVARLLRVVQFAKRIRQLL 1228
Query: 149 GAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
A+I S+ L ++ L + ++A++G+
Sbjct: 1229 VAIIISMPALFNIGTLLFLVMFIYAIIGMSS 1259
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 22/152 (14%)
Query: 40 PLFSLFIITTILTNCILMIM--PGTP-----TIESTEVIFTGIYTFESAVKVMARGFILE 92
PLF I IL N +++ M G P ++ IFTG++ E VK+ A G +
Sbjct: 480 PLFDGIIAGLILLNTVVLTMYYHGMPDDLTFVLDILNAIFTGLFILEMIVKIFAFGLV-- 537
Query: 93 SFTYLRDAWNWLDFIVI---ALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKT--- 146
Y+ + WN D ++I A+AY LG + FR+LR L+ + + +T
Sbjct: 538 --KYICNKWNLFDSVIIITSAVAYF-----LGTSTGVSIFRILRLLRVLYLAQSWETMAK 590
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ A+ SV + ++ + + VFA++G++
Sbjct: 591 LIRAIAHSVDPIFNITCILGVIIYVFAVVGMR 622
>gi|386768618|ref|NP_001246507.1| Na channel protein 60E, isoform I [Drosophila melanogaster]
gi|383302696|gb|AFH08260.1| Na channel protein 60E, isoform I [Drosophila melanogaster]
Length = 2712
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 75/137 (54%), Positives = 101/137 (73%), Gaps = 2/137 (1%)
Query: 47 ITTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ TIL NCI + M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF
Sbjct: 1 MATILFNCIFLAM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDF 58
Query: 107 IVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTM 166
+VI Y T+G+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+
Sbjct: 59 VVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTI 118
Query: 167 FSLSVFALMGLQDSRGK 183
F L VFAL LQ G+
Sbjct: 119 FCLMVFALFALQVYMGE 135
Score = 39.7 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 556 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 610
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 611 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 670
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 671 ISTIGALGNLTLILVIVIYIFAVIGMQ 697
>gi|18073669|emb|CAC84550.1| Nav1.7 [Homo sapiens]
gi|18073671|emb|CAC84551.1| Nav1.7 [Homo sapiens]
Length = 115
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 97/112 (86%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA 125
++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++LGN++A
Sbjct: 4 KNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSA 63
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 64 LRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 115
>gi|365767359|gb|AEW90237.1| voltage-gated sodium channel Nav2.1, partial [Hydra magnipapillata]
Length = 1685
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFT 73
F+ LW+ D NPIR+ AIYI+ + LF F+ITT++ NC+ + M P E E +FT
Sbjct: 1 FNKEKTLWIFDISNPIRKWAIYIITNKLFDFFMITTVIINCLFLAMNNAP--EVAEYVFT 58
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLR 133
GIYT E +K+ A+G +L + YLRD WN LDF+V+ L Y+T+ + NL+ + FRVLR
Sbjct: 59 GIYTLEMILKIFAKGLLLHHYAYLRDGWNILDFVVVVLGYITLLPGVANLSGISIFRVLR 118
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
AL+T++ + GLKT+V A++ ++ + VIILT F + +FAL GLQ
Sbjct: 119 ALRTISSIEGLKTMVNALLNAMAMMSSVIILTTFFVCIFALFGLQ 163
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%), Gaps = 13/141 (9%)
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD--FIVIALA----- 112
P P +E +F ++ E +K+ A GF+ +LR+ WN + +++LA
Sbjct: 905 PVRPMLEKCNTVFAILFLVEFFLKIFALGFV----KFLRNPWNSFETANAIVSLASVLNE 960
Query: 113 YVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
Y + ++ + +LRT R LR L+ ++ G+K +V +++ ++ ++ +V ++ + +F
Sbjct: 961 YARIITNVNAIRSLRTLRALRPLRAISHWKGIKIVVNSLLAAIPSIGNVFLVCILFWLIF 1020
Query: 173 ALMGLQDSRGK--KSDESHDK 191
+++G+Q GK K H++
Sbjct: 1021 SILGVQLFGGKFYKCINEHNE 1041
>gi|18073685|emb|CAC84533.1| Nav1.5 [Homo sapiens]
gi|18073687|emb|CAC84534.1| Nav1.5 [Homo sapiens]
Length = 156
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 96/116 (82%)
Query: 63 PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN 122
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +DLGN
Sbjct: 8 PWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVDLGN 67
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 68 VSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 123
>gi|307169782|gb|EFN62327.1| Sodium channel protein 60E [Camponotus floridanus]
Length = 1975
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
Query: 47 ITTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+TTIL NC+ + M T TIE E IF IYT E VK +A+GFIL +TYLR+ WNWLDF
Sbjct: 1 MTTILLNCVFLAM--TETIEEAEYIFLAIYTVEMVVKSIAKGFILNKYTYLRNPWNWLDF 58
Query: 107 IVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTM 166
+VI Y T+G+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S K L +V+ LT+
Sbjct: 59 VVITSGYATIGMEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFKQLAEVMTLTI 118
Query: 167 FSLSVFALMGLQ 178
F L VFAL LQ
Sbjct: 119 FCLMVFALFALQ 130
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE +K++A
Sbjct: 540 PLFELMITLCIVLNTGFLAMEHHGMSESIRQALNIGNKVFTSIFTFECFLKLLAL----- 594
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGLKTIVGAV 151
S + + WN D I+++ + + + +L L+ +R R+LR LK +K ++ +
Sbjct: 595 SKDFFNNGWNNFDLIIVSASLIDLTFELVDGLSVIRGLRLLRVLKLAQSWTTMKVLLSII 654
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ + + + +FA++G+Q
Sbjct: 655 ISTIGALGNLTFVLVIVIYIFAVIGMQ 681
>gi|365812015|gb|AEX00071.1| voltage-gated sodium channel Nav2.2 [Nematostella vectensis]
Length = 1575
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 122/183 (66%), Gaps = 7/183 (3%)
Query: 1 TFVVVSK-----GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI 55
TF+++SK G +RFS T +L L P +P+R I ++ HP F + + IL NCI
Sbjct: 97 TFLILSKRFNSSGYRAYRFSRTVSLLCLGPVHPLRMFCILLITHPYFEIIVTLVILVNCI 156
Query: 56 LMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
++ + P E E IFT IYT E K+++RGF+ +S+ YLRD WNWLD +V+ L+Y++
Sbjct: 157 ILGLNDPP--EEAEYIFTAIYTLEMICKIISRGFVKDSYAYLRDTWNWLDSLVVFLSYLS 214
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ D+ +L+ +RT RVLRA +T++ + GL+ +V +++ S+K L DV++L +FSL V AL+
Sbjct: 215 LAPDIASLSGIRTLRVLRAFRTISALKGLRAMVNSLLRSLKLLTDVLVLFLFSLCVLALI 274
Query: 176 GLQ 178
GLQ
Sbjct: 275 GLQ 277
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 82/157 (52%), Gaps = 17/157 (10%)
Query: 39 HPLFSLFIITTILTNCILMI-----MPGTPTIEST----EVIFTGIYTFESAVKVMARGF 89
H F FI+ T++ + ++ + P +E T +F I++ E +KV+ GF
Sbjct: 867 HRYFEWFILFTVMVSSFTLVFEDIHLHQKPDLERTLNFLNFLFAAIFSLEFILKVIGFGF 926
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV---LRALKTVAIVPGLKT 146
+ +Y WN LD ++++++ + + NL+ R+FR LR L+ ++ + G+K
Sbjct: 927 V----SYFTSVWNCLDALIVSVSVACL-FENPNLSVFRSFRTVRGLRPLRAISRLGGMKV 981
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ A+ ++ + V++++M +F++ G+Q GK
Sbjct: 982 VINALFAAIPGIGSVLVVSMLFWLMFSISGVQLFAGK 1018
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 26/174 (14%)
Query: 22 VLDPFNPIRRVAIYILVH----PLFSLFIITTILTNCILMIM--PGTP-----TIESTEV 70
VL P P A LV PLF I IL N +++ M G P ++
Sbjct: 476 VLCPKYPRLSRACSALVEFIQRPLFDGIITGLILLNTVVLTMYYHGMPDDLTFVLDILNA 535
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI---ALAYVTMGIDLGNLAALR 127
IFTG++ E VK+ A G + Y+ + WN D ++I A+AY LG +
Sbjct: 536 IFTGLFILEMIVKIFAFGLV----KYICNKWNLFDSVIIITSAVAYF-----LGTSTGVS 586
Query: 128 TFRVLRALKTVAIVPGLKT---IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
FR+LR L+ + + +T ++ A+ SV + ++ + + VFA++G++
Sbjct: 587 IFRILRLLRVLYLAQSWETMAKLIRAIAHSVDPIFNITCILGVIIYVFAVVGMR 640
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 42 FSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESF 94
F +FI+T I+ N +M++ T ++ + GI+ E+ +K++A
Sbjct: 1187 FEVFILTVIMCNVGMMMVQHYDQPPLTTVVLKIGNYVLVGIFLLEAIIKIIAM-----RL 1241
Query: 95 TYLRDAWNWLDFIVIALAYVTMGIDL----------GNLAALRTFRVLRALKTVAIVPGL 144
Y + AW+ DF+V+ + V +D G L LR FRV R L+ V +
Sbjct: 1242 HYFKKAWSIFDFVVVVSSIVGTVLDEMSTESAVVSPGLLRVLRVFRVARLLRVVQFAKRI 1301
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+ ++ A+I S+ L ++ L + ++A++G+
Sbjct: 1302 RQLLVAIIISMPALFNIGTLLFLVMFIYAIIGMSS 1336
>gi|350591074|ref|XP_003483196.1| PREDICTED: hypothetical protein LOC100739108 [Sus scrofa]
Length = 1328
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 75/112 (66%), Positives = 90/112 (80%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFR 130
+FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL ++ LRTFR
Sbjct: 292 VFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFR 351
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
VLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ +G
Sbjct: 352 VLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGLQLFKG 403
>gi|365812017|gb|AEX00072.1| voltage-gated sodium channel Nav2.3 [Nematostella vectensis]
Length = 1722
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 120/183 (65%), Gaps = 7/183 (3%)
Query: 1 TFVVVSK----GKD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI 55
TF+++S+ G+D RF+ T L+++ P NP+R A ILVH F F+I IL NC+
Sbjct: 92 TFIILSRRGKSGQDQAHRFTTTRCLYMMGPLNPVRLFATRILVHQYFEAFVIFIILVNCV 151
Query: 56 LMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + P E E +F IYT E +K +A+GF++ SF YLRDAWN LDF V+ + YVT
Sbjct: 152 FLALDHPP--EEAEYVFAFIYTSEMFLKXIAKGFVMHSFAYLRDAWNALDFFVVIMGYVT 209
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+ ++ N + +RT RVLRAL+T++ + GLK +V ++ S+K L DV++L +F L V AL+
Sbjct: 210 LAPNIANFSGIRTIRVLRALRTISAMKGLKAMVNTLLRSMKMLSDVLVLFLFFLCVMALI 269
Query: 176 GLQ 178
GLQ
Sbjct: 270 GLQ 272
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV---------IFTGIYTFESAVKVM 85
+I+ H F FI+ + + +++ E+ + F GI+ E +K++
Sbjct: 879 FIVEHKFFEWFILLLVFISSFVLVFEDVHLKENPRLAYALDMLNYFFAGIFALEFVLKII 938
Query: 86 ARGFILESFTYLRDAWNWLD-FIV-IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPG 143
G ++E F+ WN+LD FIV ++LA V L +LRT R LR L+ V+ + G
Sbjct: 939 GLG-VMEFFSSF---WNFLDAFIVAVSLACVVQDKGLAVFRSLRTVRALRPLRAVSRLEG 994
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+K +V A+ ++ + +V+++++ +F+++G+Q
Sbjct: 995 MKVVVNALFAAIPGIANVLLVSLLFWLIFSILGVQ 1029
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESAV 82
+R+ + + HP F + ++ IL + +++ + ++ + FT I+TFE V
Sbjct: 511 QRLLLKGIDHPAFEIGVMFFILASTVILALYHHGIDHEFKRILDILNLFFTAIFTFEMGV 570
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL------AALRTFRVLRALK 136
K++A G I YL+ WN D I++ ++ + +L N+ + RTFR++R LK
Sbjct: 571 KLLALGVI----DYLQSRWNIFDGIIVIVSLIGTVFELANIRESAGTSIFRTFRLVRILK 626
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ ++ + SV + ++ ++ + + +FA+MG++
Sbjct: 627 LAQSWKTMGKLLSTIGNSVGPIGNITLILVLIIYIFAVMGVK 668
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P + IR ++ F + ++ I+ N +M++ E ++ FT ++
Sbjct: 1188 PNDIIRGCIFDVVTGTTFEILLLGVIMANMGVMMVQHYDQSEDVTIVLTNLNRVFTAVFL 1247
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-----LGN---LAALRTF 129
E+ K++A Y R AWN DF ++ L+ V + +D GN L +R F
Sbjct: 1248 LETIAKLVAL-----RLYYFRKAWNVFDFFIVLLSLVGLFMDELNTGYGNPSLLRVMRIF 1302
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
RV R L+ + G++ ++ A+I S+ L ++ L + ++A++G+
Sbjct: 1303 RVARLLRLLEFAKGIRQLLVALIISLPALLNIGTLLFLVIFIYAIIGM 1350
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.329 0.142 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,614,529,253
Number of Sequences: 23463169
Number of extensions: 92700983
Number of successful extensions: 336267
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3131
Number of HSP's successfully gapped in prelim test: 1109
Number of HSP's that attempted gapping in prelim test: 314652
Number of HSP's gapped (non-prelim): 12663
length of query: 191
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 57
effective length of database: 9,215,130,721
effective search space: 525262451097
effective search space used: 525262451097
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 72 (32.3 bits)