BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14955
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35500|SCNA_DROME Sodium channel protein para OS=Drosophila melanogaster GN=para PE=2
SV=3
Length = 2131
Score = 335 bits (860), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 92/170 (54%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIES----TEVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAA---LRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +RT R LR
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1405
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 23/186 (12%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F + I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKF---QEWVSLIVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQ 178
A+MG+Q
Sbjct: 955 AVMGMQ 960
>sp|P35498|SCN1A_HUMAN Sodium channel protein type 1 subunit alpha OS=Homo sapiens
GN=SCN1A PE=1 SV=2
Length = 2009
Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ V +++ P L I I+ N + M M P +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + + +F + I+ I N
Sbjct: 1495 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLN 1554
Query: 54 CILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T + ++F ++T E +K+++ L + Y WN DF
Sbjct: 1555 MVTMMVETDDQSEYVTTILSRINLVFIVLFTGECVLKLIS----LRHY-YFTIGWNIFDF 1609
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1610 VVVILSIV--GMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1667
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1668 PALFNIGLLLFLVMFIYAIFGMSN 1691
>sp|P04774|SCN1A_RAT Sodium channel protein type 1 subunit alpha OS=Rattus norvegicus
GN=Scn1a PE=2 SV=1
Length = 2009
Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNH 798
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + + +F + I+ I N
Sbjct: 1495 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLN 1554
Query: 54 CILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T + ++F ++T E +K+++ L + Y WN DF
Sbjct: 1555 MVTMMVETDDQSDYVTSILSRINLVFIVLFTGECVLKLIS----LRHY-YFTIGWNIFDF 1609
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1610 VVVILSIV--GMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1667
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1668 PALFNIGLLLFLVMFIYAIFGMSN 1691
>sp|P08104|SCN3A_RAT Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus
GN=Scn3a PE=1 SV=1
Length = 1951
Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P +
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFSS 741
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R A + +F + I+ I N
Sbjct: 1431 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLN 1490
Query: 54 CILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T + ++F ++T E +K+++ + Y WN DF
Sbjct: 1491 MVTMMVETDDQSKYMTLVLSRINLVFIVLFTGEFLLKLISL-----RYYYFTIGWNIFDF 1545
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1546 VVVILSIV--GMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1603
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1604 PALFNIGLLLFLVMFIYAIFGMSN 1627
>sp|Q99250|SCN2A_HUMAN Sodium channel protein type 2 subunit alpha OS=Homo sapiens
GN=SCN2A PE=1 SV=3
Length = 2005
Score = 246 bits (627), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R A + +F + I+ I N
Sbjct: 1485 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLN 1544
Query: 54 CI-LMIMPGTPTIESTEV------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ +M+ + E T + +F ++T E +K+++ + Y WN DF
Sbjct: 1545 MVTMMVETDDQSQEMTNILYWINLVFIVLFTGECVLKLISL-----RYYYFTIGWNIFDF 1599
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1600 VVVILSIV--GMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1657
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1658 PALFNIGLLLFLVMFIYAIFGMSN 1681
>sp|Q9NY46|SCN3A_HUMAN Sodium channel protein type 3 subunit alpha OS=Homo sapiens
GN=SCN3A PE=1 SV=2
Length = 2000
Score = 244 bits (623), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P E
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R A + +F + I+ I N
Sbjct: 1480 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLN 1539
Query: 54 CILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T + ++F ++T E +K+++ L + Y WN DF
Sbjct: 1540 MVTMMVETDDQGKYMTLVLSRINLVFIVLFTGEFVLKLVS----LRHY-YFTIGWNIFDF 1594
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1595 VVVILSIV--GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1652
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1653 PALFNIGLLLFLVMFIYAIFGMSN 1676
>sp|P04775|SCN2A_RAT Sodium channel protein type 2 subunit alpha OS=Rattus norvegicus
GN=Scn2a PE=1 SV=1
Length = 2005
Score = 242 bits (617), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LR+ WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRNPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P E
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA-------IYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R A + +F + I+ I N
Sbjct: 1485 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLN 1544
Query: 54 CI-LMIMPGTPTIESTEV------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ +M+ + E T + +F ++T E +K+++ L + Y WN DF
Sbjct: 1545 MVTMMVETDDQSQEMTNILYWINLVFIVLFTGECVLKLIS----LRHY-YFTIGWNIFDF 1599
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1600 VVVILSIV--GMFLAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1657
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1658 PALFNIGLLLFLVMFIYAIFGMSN 1681
>sp|Q15858|SCN9A_HUMAN Sodium channel protein type 9 subunit alpha OS=Homo sapiens
GN=SCN9A PE=1 SV=3
Length = 1988
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1181 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1240
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1241 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1296
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1297 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1346
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E
Sbjct: 715 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 774
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 775 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 40/216 (18%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIYILV-HPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ LV + F + I+ I N
Sbjct: 1469 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCIFDLVTNQAFDISIMVLICLN 1528
Query: 54 CI-LMIMPGTPTIESTEV------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ +M+ + TEV +F ++T E +K+++ L + Y WN DF
Sbjct: 1529 MVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLIS----LRHY-YFTVGWNIFDF 1583
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ ++ V G+ L +L +R R+ R L+ V G++T++ A++ S+
Sbjct: 1584 VVVIISIV--GMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAKGIRTLLFALMMSL 1641
Query: 156 KNLRDVIILTMFSLSVFALMGLQD-SRGKKSDESHD 190
L ++ +L + ++A+ G+ + + KK D +D
Sbjct: 1642 PALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGIND 1677
>sp|Q62205|SCN9A_MOUSE Sodium channel protein type 9 subunit alpha OS=Mus musculus
GN=Scn9a PE=1 SV=2
Length = 1984
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P +
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIYILV-HPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ LV + F + I+ I N
Sbjct: 1467 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDLVTNQAFDITIMVLICLN 1526
Query: 54 CILMIMPGTPTIEST-------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1527 MVTMMVEKEGQTDYMSFVLYWINVVFIILFTGECVLKLIS----LRHY-YFTVGWNIFDF 1581
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1582 VVVILSIV--GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1639
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1640 PALFNIGLLLFLVMFIYAIFGMSN 1663
>sp|P15390|SCN4A_RAT Sodium channel protein type 4 subunit alpha OS=Rattus norvegicus
GN=Scn4a PE=2 SV=1
Length = 1840
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTN 53
GKDIF ++A L P PI R I + +F + I+ I N
Sbjct: 1300 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLN 1359
Query: 54 CILMIMPGTPTIE-------STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + + ++F I+T E +K+ F L + Y WN DF
Sbjct: 1360 MVTMMVETDDQSQLKVDILYNINMVFIIIFTGECVLKM----FALRHY-YFTIGWNIFDF 1414
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1415 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1472
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1473 PALFNIGLLLFLVMFIYSIFGMSN 1496
>sp|Q9ER60|SCN4A_MOUSE Sodium channel protein type 4 subunit alpha OS=Mus musculus
GN=Scn4a PE=2 SV=1
Length = 1841
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIILLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1014 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1073
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1074 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1129
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1130 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1179
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTN 53
GKDIF ++A L P PI R I + +F + I+ I N
Sbjct: 1301 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDISIMILICLN 1360
Query: 54 CILMIMPGTPTIE-------STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ + + ++F ++T E +K+ F L + Y WN DF
Sbjct: 1361 MVTMMVETDDQSQLKVDILYNINMVFIIVFTGECVLKM----FALRHY-YFTIGWNIFDF 1415
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1416 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1473
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++++ G+ +
Sbjct: 1474 PALFNIGLLLFLVMFIYSIFGMSN 1497
>sp|O08562|SCN9A_RAT Sodium channel protein type 9 subunit alpha OS=Rattus norvegicus
GN=Scn9a PE=1 SV=1
Length = 1984
Score = 239 bits (610), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 149/179 (83%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTLS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 773
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+IFTGI+ E +K++A ++ + Y + WN D +++ L+ + + + D+
Sbjct: 774 VLAVGNLIFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLIELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
Score = 33.9 bits (76), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIYILV-HPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ LV + F + I+ I N
Sbjct: 1467 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDLVTNQAFDITIMVLICLN 1526
Query: 54 CILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ E + ++F ++T E +K+++ L + Y WN DF
Sbjct: 1527 MVTMMVEKEGQTEYMDYVLHWINMVFIILFTGECVLKLIS----LRHY-YFTVGWNIFDF 1581
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1582 VVVILSIV--GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1639
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1640 PALFNIGLLLFLVMFIYAIFGMSN 1663
>sp|Q28644|SCN9A_RABIT Sodium channel protein type 9 subunit alpha OS=Oryctolagus
cuniculus GN=SCN9A PE=2 SV=1
Length = 1984
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYILSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
++ E FTGIYTFES VK+ ARGF + FT+LRD WNWLDFIVI AY+T ++
Sbjct: 147 NPAEWTKNVEYTFTGIYTFESLVKIFARGFCVGEFTFLRDPWNWLDFIVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DVIILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVIILTVFCLSVFALIGLQ 265
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + IFT I+ E
Sbjct: 1178 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1237
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ DLG + +LRT R LR
Sbjct: 1238 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1293
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1294 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1343
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPTIES--- 67
+RF+ T +W PF + IYI+V P L I I+ N + M M P E
Sbjct: 712 YRFAHTFLIWNCSPFWIKFKKFIYIIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 771
Query: 68 ----TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 772 VLVVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNVFDSLIVTLSLVELFLADVEG 827
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 828 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGPLGNLTLVLAIIVFIFAVVGMQ 883
Score = 33.5 bits (75), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRV------AIYILV-HPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ LV + F + I+ I N
Sbjct: 1466 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGCIFDLVTNQAFDITIMILICLN 1525
Query: 54 CILMIMPG-------TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ T + V+F ++T E +K+++ L + Y WN DF
Sbjct: 1526 MVTMMVEKEGQSDYMTDVLYWINVVFIILFTGECVLKLIS----LRHY-YFTIGWNIFDF 1580
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1581 VVVILSIV--GMFLAELIETYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL 1638
Query: 156 KNLRDVIILTMFSLSVFALMGLQD 179
L ++ +L + ++A+ G+ +
Sbjct: 1639 PALFNIGLLLFLVMFIYAIFGMSN 1662
>sp|O88420|SCN8A_RAT Sodium channel protein type 8 subunit alpha OS=Rattus norvegicus
GN=Scn8a PE=1 SV=1
Length = 1978
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>sp|Q9WTU3|SCN8A_MOUSE Sodium channel protein type 8 subunit alpha OS=Mus musculus
GN=Scn8a PE=1 SV=1
Length = 1978
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1505 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1564
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1565 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1617
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1618 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1670
>sp|P15389|SCN5A_RAT Sodium channel protein type 5 subunit alpha OS=Rattus norvegicus
GN=Scn5a PE=2 SV=1
Length = 2019
Score = 236 bits (603), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 42/202 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-VAIY------ILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R + Y I+ F + I+ I N
Sbjct: 1484 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLN 1543
Query: 54 CILMIMP---GTPT----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
+ M++ +P + ++F I+T E VK+ A L + Y ++WN DF
Sbjct: 1544 MVTMMVETDDQSPEKVNILAKINLLFVAIFTGECIVKMAA----LRHY-YFTNSWNIFDF 1598
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G L ++ +R R+ R L+ + G++T++ A++ S+
Sbjct: 1599 VVVILSIV--GTVLSDIIQKYFFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSL 1656
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1657 PALFNIGLLLFLVMFIYSIFGM 1678
>sp|Q9JJV9|SCN5A_MOUSE Sodium channel protein type 5 subunit alpha OS=Mus musculus
GN=Scn5a PE=1 SV=2
Length = 2019
Score = 236 bits (602), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPT 64
RF+ +W P + I++ ++++ P L I I+ N + M +
Sbjct: 689 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
++ ++FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL------ 123
++F I+T E VK+ A L + Y ++WN DF+V+ L+ V G L ++
Sbjct: 1567 LLFVAIFTGECIVKMAA----LRHY-YFTNSWNIFDFVVVILSIV--GTVLSDIIQKYFF 1619
Query: 124 -----AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
+R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1620 SPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM 1678
>sp|P35499|SCN4A_HUMAN Sodium channel protein type 4 subunit alpha OS=Homo sapiens
GN=SCN4A PE=1 SV=4
Length = 1836
Score = 236 bits (602), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 29/199 (14%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I +V+ L + F IT ++ C+
Sbjct: 1307 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDLVTKQAFDITIMILICLN 1366
Query: 57 MIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRD-----AWNWLDFIVIAL 111
M+ T +++ +Y ++ G + LR WN DF+V+ L
Sbjct: 1367 MVTMMVETDNQSQLKVDILYNINMIFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVIL 1426
Query: 112 AYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRD 160
+ V G+ L +L +R R+ R L+ + G++T++ A++ S+ L +
Sbjct: 1427 SIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFN 1484
Query: 161 VIILTMFSLSVFALMGLQD 179
+ +L + ++++ G+ +
Sbjct: 1485 IGLLLFLVMFIYSIFGMSN 1503
>sp|Q9UQD0|SCN8A_HUMAN Sodium channel protein type 8 subunit alpha OS=Homo sapiens
GN=SCN8A PE=1 SV=1
Length = 1980
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 148/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 12 FRFSATDALWVLDPFN-PIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K A GF+ + +AW WLDF+++A++ V++ +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV----KFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F + I+ I N + M++ + E ++F +T
Sbjct: 1507 PLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMENILYWINLVFVIFFT 1566
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + Y WN DF+V+ L+ V G+ L ++ +
Sbjct: 1567 CECVLKM----FALRHY-YFTIGWNIFDFVVVILSIV--GMFLADIIEKYFVSPTLFRVI 1619
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1620 RLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN 1672
>sp|Q14524|SCN5A_HUMAN Sodium channel protein type 5 subunit alpha OS=Homo sapiens
GN=SCN5A PE=1 SV=2
Length = 2016
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGIYTFESA 81
I++ +++ P L I I+ N + M + ++ ++FTGI+T E
Sbjct: 706 IKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLVFTGIFTAEMT 765
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRALKTVAI 140
K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR+LR K
Sbjct: 766 FKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKS 821
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 822 WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 33.5 bits (75), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 21/119 (17%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL------ 123
++F I+T E VK+ A L + Y ++WN DF+V+ L+ V G L ++
Sbjct: 1565 LLFVAIFTGECIVKLAA----LRHY-YFTNSWNIFDFVVVILSIV--GTVLSDIIQKYFF 1617
Query: 124 -----AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
+R R+ R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1618 SPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM 1676
>sp|Q2XVR3|SC4AA_DANRE Sodium channel protein type 4 subunit alpha A OS=Danio rerio
GN=scn4aa PE=2 SV=2
Length = 1829
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG IFRFS+ A++ + PF+ +RR AI IL+H LFS+FI+ TIL+NC+ M M
Sbjct: 85 TFIVISKGNTIFRFSSEPAMFCISPFSIVRRGAIKILIHSLFSMFIMITILSNCVFMTMS 144
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 145 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGPFTFLRDPWNWLDFMVISMAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKMIDVMILTIFALAVFALIGLQ 263
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FII IL + + +E + +FT I+ E
Sbjct: 986 LRRTCFTIVEHDYFETFIIFMILLSSGALAFEDINIERRRVIKTILEYADKVFTYIFIVE 1045
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V+ MG +LG + +LRT R LR
Sbjct: 1046 MLLKWVAYGFK----TYFTNAWCWLDFLIVDVSLVSLTANLMGYSELGAIKSLRTLRALR 1101
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1102 PLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1151
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTP 63
K D+F A W+L ++ ++++ P L I I+ N + M M P +P
Sbjct: 554 KFADMFLKWDCCAPWIL-----FKKWVHFVVMDPFVDLGITICIVLNTLFMAMEHYPMSP 608
Query: 64 TIEST----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI- 118
E ++FTGI+T E K++A ++ + Y + WN D I++ L+ V +G+
Sbjct: 609 HFEHVLSVGNLVFTGIFTAEMVFKLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLA 664
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 665 NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 724
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N I+ + + F +FI+ I N + M++ E ++F ++T
Sbjct: 1304 PSNIIQGLVFDFISKQFFDIFIMVLICLNMVTMMIETDDQSAEKEYVLYQINLVFIVVFT 1363
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ F L + + WN DF+V+ L+ G+ L ++ +
Sbjct: 1364 SECVLKL----FALRQY-FFTIGWNVFDFVVVILSIA--GLMLSDIIEKYFVSPTLFRVI 1416
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1417 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1469
>sp|Q20JQ7|SC4AB_DANRE Sodium channel protein type 4 subunit alpha B OS=Danio rerio
GN=scn4ab PE=2 SV=1
Length = 1784
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K I+RF+ A + L PFNP+RR AI IL+H LFSL I+ TILTNC+ M M
Sbjct: 91 TFIVIDKKNTIYRFNTEPACYCLSPFNPVRRAAIRILIHSLFSLVIMLTILTNCVFMAMS 150
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 151 DPPGWSKILEYVFTGIYTFEAMVKVLSRGFCIGDFTFLRDPWNWLDFMVISMAYLTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 269
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTEV------IFTGIYT 77
P+ +R+ ++ P L I I+ N + M M P ++ EV +FTGI+
Sbjct: 553 PWVKFKRIVYLFVMDPFVDLGITLCIVLNTVFMAMEHYPMSVHVEEVLAIGNLVFTGIFA 612
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ ++ V M D+ L+ LR+FR++R K
Sbjct: 613 AEMVLKLIA----LDPYYYFQVGWNIFDSIIVTMSLVELMLADVEGLSVLRSFRLMRVFK 668
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 669 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 710
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 962 RKTCFAIVEHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVVEM 1021
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLRA 134
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1022 LLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRP 1077
Query: 135 LKTVAIVPGLK-TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1078 LRALSRFEGMRVVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1127
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVIFTGIYTF----- 78
P N + + + F +FI+ I N + +M+ + E E++F + F
Sbjct: 1281 PTNCCQGLVFDFVTQQFFDIFIMVMICLNMVTMMVETDDQSAEIEEILFYINFAFIILFT 1340
Query: 79 -ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K+ A + Y WN DF+V+ L+ +GI L +L +
Sbjct: 1341 GECVLKITAL-----RYHYFSIGWNIFDFVVVILS--ILGIGLADLIEKYFVSPTLFRVI 1393
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1394 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1446
>sp|Q28371|SCN4A_HORSE Sodium channel protein type 4 subunit alpha OS=Equus caballus
GN=SCN4A PE=1 SV=1
Length = 1834
Score = 229 bits (584), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ IRR AI +L+H LFS+FI+ TIL NC++M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIIRRSAIKVLIHSLFSMFIMITILPNCVVMTMS 151
Query: 61 GTPTIE-STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E FTGI TFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWPIHVENTFTGINTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F F + IL N + +E + +FT I+ E
Sbjct: 1017 LRRACFKIVEHHWFKTFNSSLILLNSGTLAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1076
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ +LG + +LRT R LR
Sbjct: 1077 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1132
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1133 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWVIFSIMGVN 1177
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDKVLTVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG-IDLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ L++V +G +++ L+ LR+FR++R+LK
Sbjct: 617 AEMVLKLIA----LDPYEYFQQGWNVFDSIIVTLSWVELGLVNVKGLSVLRSFRLVRSLK 672
Query: 137 TVAIVPGLKTIV 148
P L +
Sbjct: 673 LAKSWPTLNMFI 684
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 42/202 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRRVA--IYILVHPLFS--LFIITTILTNCIL 56
GKDIF ++A L P PI R I +V+ + +F IT ++ C+
Sbjct: 1304 GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDITIMILICLN 1363
Query: 57 MIMPGTPTIESTE----------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
M+ T + ++ ++F ++T E +K+ F L Y WN DF
Sbjct: 1364 MVTMMVETDDQSQLKVDILYNINMVFIIVFTGECVLKM----FALRQ-NYFTVGWNIFDF 1418
Query: 107 IVIALAYVTMGIDLGNL-----------AALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
+V+ L+ V G+ L +L +R R+ R L+ + G++T++ A++ S+
Sbjct: 1419 VVVILSIV--GLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSL 1476
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ +IL MF S+F +
Sbjct: 1477 PALFNIGLLLILVMFIYSIFGM 1498
>sp|Q2XVR7|SC4AA_TAKRU Sodium channel protein type 4 subunit alpha A OS=Takifugu rubripes
GN=scn4aa PE=3 SV=1
Length = 1892
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVV+KG I+RF+A A ++L PF+ +RR AI IL+H LFS I+ TIL+NC+ M M
Sbjct: 86 TFVVVTKGNTIYRFNAEPACYILSPFSLVRRGAIKILIHSLFSTLIMITILSNCVFMTMS 145
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 146 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGPFTFLRDPWNWLDFMVISMAYITEFVD 205
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIV A+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 206 LGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKKMVDVMILTVFALAVFALVGLQ 264
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1059 LRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTVKIVLEFADKVFTFIFVIE 1118
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ ++ MG DLG + +LRT R LR
Sbjct: 1119 MLLKWVAYGFK----TYFTNAWCWLDFFIVDISLISLSANLMGFSDLGPIKSLRTLRALR 1174
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1175 PLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1224
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMAR 87
++++ P L I I+ N + M M P E + ++FTGI+ E K++A
Sbjct: 607 FVVMDPFVDLAITICIVLNTLFMAMEHYPMTEEFDYMLSVGNLVFTGIFAAEMFFKLIA- 665
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKT 146
++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K P L
Sbjct: 666 ---MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM 722
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + SV L ++ ++ + +FA++G+Q
Sbjct: 723 LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 754
Score = 37.7 bits (86), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 9 KDIF-------RFSATDALWVLDPFNPIRRVAIYI-------LVHPLFSLFIITTILTNC 54
KDIF + A L P PI R A I + F +FI+ I N
Sbjct: 1348 KDIFMTEEQKKYYEAMKKLGSKKPQKPIPRPANLIQGLVFDFISQQFFDIFIMVLICLNM 1407
Query: 55 ILMIMP---GTPTIE----STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFI 107
+ M++ +P E V F ++T E +K+ F L + + + WN DFI
Sbjct: 1408 VTMMVETDDQSPAKEDFLFKVNVAFIVVFTGECTLKL----FALRHY-FFTNGWNIFDFI 1462
Query: 108 VIALAYV-TMGIDLGN--------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNL 158
V+ L+ TM D+ +R R+ R L+ + G++T++ A++ S+ L
Sbjct: 1463 VVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGARGIRTLLFALMMSLPAL 1522
Query: 159 RDVIILTMFSLSVFALMGLQD 179
++ +L + +F++ G+ +
Sbjct: 1523 FNIGLLLFLIMFIFSIFGMSN 1543
>sp|Q9Y5Y9|SCNAA_HUMAN Sodium channel protein type 10 subunit alpha OS=Homo sapiens
GN=SCN10A PE=1 SV=2
Length = 1956
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPG---TPTIEST----EVIFTGIYTFESAVKVMARG 88
++ P L I I+ N I M M +PT E+ ++FT +T E K++A
Sbjct: 661 LVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIA-- 718
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
+ + Y + WN D I++ ++ + +G+ G+L+ LR+FR+LR K P L T+
Sbjct: 719 --FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTL 776
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ I+ + VFAL+G Q
Sbjct: 777 IKIIGNSVGALGNLTIILAIIVFVFALVGKQ 807
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 42/210 (20%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1430 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLN 1489
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+++ F ++T E +K+ F L + Y + WN DF
Sbjct: 1490 MITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1544
Query: 107 IVIALAYVTMGIDLGNLAALRTF------------RVLRALKTVAIVPGLKTIVGAVIES 154
IV+ L+ ++ I L +L+++ R+ R L+ + G++T++ A++ S
Sbjct: 1545 IVVVLSIASL-IFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMS 1603
Query: 155 VKNLRDV---IILTMFSLSVFALMGLQDSR 181
+ L ++ + L MF S+F + R
Sbjct: 1604 LPALFNIGLLLFLVMFIYSIFGMSSFPHVR 1633
>sp|Q2XVR4|SC4AB_TETNG Sodium channel protein type 4 subunit alpha B OS=Tetraodon
nigroviridis GN=scn4ab PE=3 SV=1
Length = 1715
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG I RF+A +L++L PFN +R AI ILVH LFSLFI+ TILTNC+ M +
Sbjct: 87 TFIVLSKGNVIHRFNAESSLYLLSPFNSMRIFAIKILVHSLFSLFIMATILTNCVFMTLS 146
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FT IYTFE+ +KV++RGF + FT+L+D WNWLDF+VI++AY+T +D
Sbjct: 147 DPPAWSKTVEYVFTFIYTFEATIKVVSRGFCVGQFTFLKDPWNWLDFMVISMAYLTELVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ LRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L D ++LT+F LSVFAL+GLQ
Sbjct: 207 LGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADAMVLTVFCLSVFALIGLQ 265
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IRR I+ + F FI+ IL + + +E + +FT ++ E
Sbjct: 903 IRRACFIIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKTILEYADKVFTYVFVVE 962
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K A GF +Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 963 MVLKWFAYGFK----SYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALR 1018
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK-------KSD 186
L+ ++ G++ +V A++ +V ++ +V+++ + +F++MG+ GK S
Sbjct: 1019 PLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFSYCFNETSQ 1078
Query: 187 ESHDK 191
E DK
Sbjct: 1079 EQFDK 1083
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++R I++ P L I I+ N I M M P E ++FTGI+T E
Sbjct: 504 LKRCLSAIVMDPFVDLGITICIILNTIFMAMEHYPMSADFEELLSVGNLVFTGIFTCEMV 563
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
+K++A ++ + Y + WN D I++ ++ V +G+ ++ L+ LR+FR++R K
Sbjct: 564 LKILA----MDPYFYFQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKS 619
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 620 WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 657
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N ++ + ++ +F +FI+ I N + M++ + E VIF I+T
Sbjct: 1223 PENALQGLVFDLVTKQIFDVFIMVLICLNMVTMMVETDEQTKEKEDILYWINVIFIVIFT 1282
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K +A Y WN DF+V+ L+ +G+ L ++ +
Sbjct: 1283 TECILKTIAL-----RRHYFSIGWNVFDFVVVILS--ILGLLLADIIEKYFVSPTLFRVI 1335
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1336 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1388
>sp|Q2XVR6|SC4AB_TAKRU Sodium channel protein type 4 subunit alpha B OS=Takifugu rubripes
GN=scn4ab PE=3 SV=1
Length = 1719
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG I+RF+A +L++L PFN +R VAI IL+H LFSLFI+ TILTNC M +
Sbjct: 87 TFIVLSKGNIIYRFNAESSLYLLSPFNALRIVAIKILIHSLFSLFIMATILTNCAFMTLS 146
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FT IYTFE+ +K+++RGF + FT+L+D WNWLDF+VI++AY+T +D
Sbjct: 147 DPPAWSKTMEYVFTFIYTFEATIKILSRGFCVGKFTFLKDPWNWLDFMVISMAYLTELVD 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ LRTFRVLRALKT+ ++PGLKTIVGA+I+SV+ L D ++LT+F LSVFAL+GLQ
Sbjct: 207 LGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVRKLADAMVLTVFCLSVFALIGLQ 265
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 19/172 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
IRR I+ + F FI+ IL + + +E + +FT ++ E
Sbjct: 907 IRRTCFSIVENNYFESFIVFMILLSSGALAFEDIYLEKHQLIKSILEYADKVFTYVFVME 966
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K A GF +Y +AW WLDF+++ ++ V++ +LG + +LRT R LR
Sbjct: 967 MVLKWFAYGFK----SYFSNAWCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALR 1022
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
L+ ++ G++ +V A++ +V ++ +V+++ + +F++MG+ GK S
Sbjct: 1023 PLRALSRFEGMRVVVNALVGAVPSIFNVLLVCLIFWLIFSIMGVNLFAGKFS 1074
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARG 88
I++ P L I I+ N + M M P E ++FTGI+T E K++A
Sbjct: 509 IVMDPFVDLGITICIILNTVFMAMEHYPMSADFEELLSVGNLVFTGIFTGEMVFKILA-- 566
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAIVPGLKTI 147
++ + Y + WN D I++ ++ V +G+ ++ L+ LR+FR++R K P L +
Sbjct: 567 --MDPYFYFQVGWNIFDSIIVTISLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNML 624
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ + SV L ++ ++ + +FA++G+Q
Sbjct: 625 IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 655
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P NP + + ++ +F +FI+ I N + M++ + E V+F I+T
Sbjct: 1227 PENPFQGLVFDLVTKQIFDVFIMVLICLNMVTMMVETDEQSDKKEEVLYWINVVFILIFT 1286
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K++A Y WN DF+V+ L+ +G+ L ++ +
Sbjct: 1287 TECTLKIIAL-----RRHYFSIGWNIFDFVVVILS--ILGLLLADIIEKYFVSPTLFRVI 1339
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1340 RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1392
>sp|Q2XVR5|SC4AA_TETNG Sodium channel protein type 4 subunit alpha A OS=Tetraodon
nigroviridis GN=scn4aa PE=3 SV=2
Length = 1863
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 142/179 (79%), Gaps = 5/179 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KG I+RF+A A ++L PF+ +RR AI IL+H L I+ TIL+NC+ M M
Sbjct: 86 TFVVITKGNTIYRFNAEPACYILSPFSRVRRGAIKILIHSL----IMITILSNCVFMTMS 141
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 142 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGPFTFLRDPWNWLDFMVISMAYITEFVD 201
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIV A+I+SVK + DV+ILT+F+LSVFAL+GLQ
Sbjct: 202 LGNVSALRTFRVLRALKTITVIPGLKTIVAALIQSVKKMVDVMILTVFALSVFALVGLQ 260
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + +FT I+ E
Sbjct: 1039 LRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTVKIILEFADKVFTFIFVLE 1098
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF ++ ++ ++ MG+ DLG + +LRT R LR
Sbjct: 1099 MVLKWVAYGFK----TYFTNAWCWLDFFIVDISLISLSANLMGLSDLGPIKSLRTLRALR 1154
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1155 PLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1204
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ W P+ + ++++ P L I I+ N + M M P + +
Sbjct: 563 YKFANMFLKWNCCQPWAVFKEWVHFVVMDPFVDLAITICIVLNTLFMAMEHYPMTQEFDY 622
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E K++A ++ + Y + WN D I++ L+ V +G+ ++
Sbjct: 623 MLSVGNLVFTGIFAAEMFFKLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQG 678
Query: 123 LAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L I+G+ + ++ NL V+ + +F +FA++G+Q
Sbjct: 679 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGSSVGALGNLTLVLAIIVF---IFAVVGMQ 734
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP---GTPTIE----STEVIFTGIYT 77
P N I+ + + F +FI+ I N + M++ +P E V F ++T
Sbjct: 1358 PTNLIQGMVFDFISQQFFDIFIMVLICLNMVTMMVETDDQSPEKEDFLFKVNVAFIVVFT 1417
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN--------LAALRT 128
E +K++A L + + + WN DF+V+ L+ TM DL +R
Sbjct: 1418 GECMLKLIA----LRQY-FFTNGWNIFDFVVVILSIAGTMLSDLIEKYFVSPTLFRVIRL 1472
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1473 ARIGRILRLIKGARGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1523
>sp|Q62968|SCNAA_RAT Sodium channel protein type 10 subunit alpha OS=Rattus norvegicus
GN=Scn10a PE=1 SV=1
Length = 1956
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 134/183 (73%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITITILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKVEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1307
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 31 RVAIYILV-HPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYTFESAV 82
++A++ LV P L I I+ N + M M P +++ ++FT +T E A
Sbjct: 654 KMALFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIVFTVFFTMEMAF 713
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIV 141
K++A + + Y + WN D +++ ++ + + G+L+ LRTFR+LR K
Sbjct: 714 KIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKGSLSVLRTFRLLRVFKLAKSW 769
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ + + +FAL+G Q
Sbjct: 770 PTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1431 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICLN 1490
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1491 MITMMVETDEQGEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1545
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ +L + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1546 IVVILSIGSLLFSAILKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1605
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1606 PALFNIGLLLFLVMFIYSIFGM 1627
>sp|Q6QIY3|SCNAA_MOUSE Sodium channel protein type 10 subunit alpha OS=Mus musculus
GN=Scn10a PE=1 SV=2
Length = 1958
Score = 214 bits (544), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFIVLDKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E FT +YTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKLEYAFTVVYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTIL--------TNCILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L P ++ E T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1307
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVI 71
+W P + + V ++ P L I I+ N + M M P +++ ++
Sbjct: 643 IWECCPKWKKFKMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIV 702
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFR 130
FT +T E A K++A + + Y + WN D +++ ++ + + G+L+ LRTFR
Sbjct: 703 FTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFR 758
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ + + +FAL+G Q
Sbjct: 759 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1431 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMALICLN 1490
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+V+ F ++T E +K+ F L + Y + WN DF
Sbjct: 1491 MITMMVETDNQSEEKTKVLGRINQFFVAVFTGECVMKM----FALRQY-YFTNGWNVFDF 1545
Query: 107 IVIALAYVTMGID--LGNLAA---------LRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
IV+ L+ ++ L +L + +R R+ R L+ + G++T++ A++ S+
Sbjct: 1546 IVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1605
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1606 PALFNIGLLLFLVMFIYSIFGM 1627
>sp|P02719|SCNA_ELEEL Sodium channel protein OS=Electrophorus electricus PE=2 SV=1
Length = 1820
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG I RF+A AL++ PFNPIRR AI + V+ F+ FI+ TI +NCI M +
Sbjct: 83 TFIVISKGNIINRFNAERALYIFSPFNPIRRGAIRVFVNSAFNFFIMFTIFSNCIFMTIS 142
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E FTGIYTFE VKV++RGF + FT+LRD WNWLDF V+ + Y+T ID
Sbjct: 143 NPPAWSKIVEYTFTGIYTFEVIVKVLSRGFCIGHFTFLRDPWNWLDFSVVTMTYITEFID 202
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L N++ALRTFRVLRALKT+ I PGLKTIV A+IES+K + DV+ILT+FSL+VF L G+Q
Sbjct: 203 LRNVSALRTFRVLRALKTITIFPGLKTIVRALIESMKQMGDVVILTVFSLAVFTLAGMQ 261
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPG---------TPTIESTEVIFTGIYTFE 79
+RR I+ H F FII IL + ++ +E + +FT ++ E
Sbjct: 989 LRRTCYTIVEHDYFETFIIFMILLSSGVLAFEDIYIWRRRVIKVILEYADKVFTYVFIVE 1048
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI--------DLGNLAALRTFRV 131
+K +A GF Y DAW WLDF+++ + MGI +LG + LRT R
Sbjct: 1049 MLLKWVAYGFK----RYFTDAWCWLDFVIVGAS--IMGITSSLLGYEELGAIKNLRTIRA 1102
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1103 LRPLRALSRFEGMKVVVRALLGAIPSIMNVLLVCLMFWLIFSIMGVNLFAGK 1154
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ +++ ++++ P LFI I+ N + M + P ES + ++FT I+
Sbjct: 551 PWVFLKKWVHFVMMDPFTDLFITLCIILNTLFMSIEHHPMNESFQSLLSAGNLVFTTIFA 610
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I+++L+ + +G+ ++ ++ LR+ R+LR K
Sbjct: 611 AEMVLKIIA----LDPYYYFQQTWNIFDSIIVSLSLLELGLSNMQGMSVLRSLRLLRIFK 666
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ I+ + +FAL+G Q
Sbjct: 667 LAKSWPTLNILIKIICNSVGALGNLTIVLAIIVFIFALVGFQ 708
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYT 77
P N ++ V I+ P +FI+ I N + M++ + VIF I+T
Sbjct: 1307 PSNVVQGVVYDIVTQPFTDIFIMALICINMVAMMVESEDQSQVKKDILSQINVIFVIIFT 1366
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL-----------AAL 126
E +K++A L + + WN DF V+ ++ + G+ L ++ +
Sbjct: 1367 VECLLKLLA----LRQY-FFTVGWNVFDFAVVVISII--GLLLSDIIEKYFVSPTLFRVI 1419
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
R R+ R L+ + G++T++ A++ S+ L ++ +L + +F++ G+ +
Sbjct: 1420 RLARIARVLRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSN 1472
>sp|O46669|SCNAA_CANFA Sodium channel protein type 10 subunit alpha OS=Canis familiaris
GN=SCN10A PE=2 SV=1
Length = 1962
Score = 207 bits (527), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 131/183 (71%), Gaps = 2/183 (1%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLDKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVGMTQT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P + E +FT IYTFE+ +K++ARGF L F YLRD W+WLDF VI LAY+ L
Sbjct: 151 ELP--DRIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWDWLDFSVITLAYIGEATAL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RGK 183
+G
Sbjct: 269 KGN 271
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ E
Sbjct: 1148 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYHLDQKPTVKALLEYTDRMFTFIFVLE 1207
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ D+ ++ ALRT R LR
Sbjct: 1208 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLIAKILQYSDVASIKALRTLRALR 1263
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F+ MG+ GK
Sbjct: 1264 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSTMGVNFFAGK 1313
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
++ V I+ P L I+ N + M M + E ++FT +T E
Sbjct: 663 LKTVLFGIVTDPFAELTTTLCIVVNTVFMAMEHHGMSSAFEAMLQIGNIVFTVFFTAEMV 722
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALKTVAI 140
K++A + + Y + WN D I++ ++ + +G G+L+ LRTFR+LR K
Sbjct: 723 FKIIA----FDPYYYFQKRWNIFDCIIVTVSLIELGAARKGSLSVLRTFRLLRVFKLAKS 778
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ I+ + VFAL+G Q
Sbjct: 779 WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 816
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 8 GKDIF-------RFSATDALWVLDPFNPIRR-------VAIYILVHPLFSLFIITTILTN 53
G+DIF ++A L P PI R I+ F + I+ I N
Sbjct: 1437 GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTKQAFDIVIMVLICLN 1496
Query: 54 CI-LMIMPGTPTIESTEVI------FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDF 106
I +M+ + E T+++ F ++T E +K+ F L + Y + WN DF
Sbjct: 1497 MITMMVETDEQSAEKTKILNKINQFFVAVFTGECVMKM----FALRHY-YFTNGWNVFDF 1551
Query: 107 IVI-----ALAYVTMGIDLGNLAALRTFRVLRA------LKTVAIVPGLKTIVGAVIESV 155
IV+ +L + + L N + FRV+R L+ + G++T++ A++ S+
Sbjct: 1552 IVVVLSIGSLVFSVILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSL 1611
Query: 156 KNLRDV---IILTMFSLSVFAL 174
L ++ + L MF S+F +
Sbjct: 1612 PALFNIGLLLFLVMFIYSIFGM 1633
>sp|Q9R053|SCNBA_MOUSE Sodium channel protein type 11 subunit alpha OS=Mus musculus
GN=Scn11a PE=1 SV=2
Length = 1765
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 134/184 (72%), Gaps = 6/184 (3%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNPIR I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSVFSMFIICTVIINCMFMANN 149
Query: 61 GT----PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 150 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 209
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 210 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 269
Query: 175 MGLQ 178
+G Q
Sbjct: 270 VGQQ 273
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1024 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNIFTFIFLLE 1083
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ +L NL + R R LR L+ ++
Sbjct: 1084 MILKWVAFGFR----KYFTSAWCWLDFLIVVVSGLSL-TNLPNLKSFRNLRALRPLRALS 1138
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1139 QFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1182
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 560 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 620 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 675
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 676 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 718
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT-----IESTEVIFTGIYT 77
P N + ++ +F + I+ I+TN I+M+ G P + ++F I+T
Sbjct: 1332 PLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFDILNIVFVVIFT 1391
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA 134
E +KV F L Y + WN D +V+ L+ ++ G++ N+ FR++R
Sbjct: 1392 VECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTLFRIVRL 1446
Query: 135 ------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1447 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMN 1496
>sp|Q9W0Y8|SCN60_DROME Sodium channel protein 60E OS=Drosophila melanogaster GN=NaCP60E
PE=2 SV=5
Length = 2821
Score = 194 bits (492), Expect = 4e-49, Method: Composition-based stats.
Identities = 94/186 (50%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 39.7 bits (91), Expect = 0.011, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 40 PLFSLFIITTILTNCILMIMPGTPTIES-------TEVIFTGIYTFESAVKVMARGFILE 92
PLF L I I+ N + M ES +FT I+TFE VK+MA
Sbjct: 688 PLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLMAL----- 742
Query: 93 SFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIV-PGLKTIVGAV 151
S + WN D +++ + + + +L + ++ L + +A +K ++ +
Sbjct: 743 SKDFFLCGWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTMKVLLSII 802
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
I ++ L ++ ++ + + +FA++G+Q
Sbjct: 803 ISTIGALGNLTLILVIVIYIFAVIGMQ 829
>sp|O88457|SCNBA_RAT Sodium channel protein type 11 subunit alpha OS=Rattus norvegicus
GN=Scn11a PE=1 SV=1
Length = 1765
Score = 187 bits (474), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 5/182 (2%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNP+R + I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPLRSLMIRISVHSVFSMFIICTVIINCMFMANS 149
Query: 61 GTPTIES--TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
+ ++ E +F GIY E+ +K++ARGFI++ F++LRD WNWLDFIVI A T
Sbjct: 150 MERSFDNDIPEYVFIGIYILEAVIKILARGFIVDEFSFLRDPWNWLDFIVIGTAIATCFP 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
G + NL+ALRTFRV RALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL+G
Sbjct: 210 GSQV-NLSALRTFRVFRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFALVG 268
Query: 177 LQ 178
Q
Sbjct: 269 QQ 270
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIE----STEVIFTGIYTFE 79
IR+ I+ H F FII IL + +I +P P +E T+ IFT I+ E
Sbjct: 1023 IRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLRCTDNIFTFIFLLE 1082
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW WLDF+++ ++ +++ ++L +L + RT R LR L+ ++
Sbjct: 1083 MILKWVAFGFR----RYFTSAWCWLDFLIVVVSVLSL-MNLPSLKSFRTLRALRPLRALS 1137
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1138 QFEGMKVVVYALISAIPAILNVLLVCLIFWLVFCILGVNLFSGK 1181
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYTFESA 81
I++V I+ P L I I+ N + + + ++ + I FTGI+ E
Sbjct: 561 IKKVLRTIMTDPFTELAITICIIINTVFLAVEHHNMDDNLKTILKIGNWVFTGIFIAEMC 620
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALA-----YVTMGIDLGNLAALRTFRVLRALK 136
+K++A L+ + Y R WN D IV L+ Y T+ + N + L + RVLR K
Sbjct: 621 LKIIA----LDPYHYFRHGWNVFDSIVALLSLADVLYNTLSDN--NRSFLASLRVLRVFK 674
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 675 LAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 716
Score = 37.4 bits (85), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-------PTIESTEVIFTGIYT 77
P N + ++ +F + I+ I+ N I+M+ T + + F I+T
Sbjct: 1331 PLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAESADQPKDVKKTFDILNIAFVVIFT 1390
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAAL----R 127
E +KV F L Y + WN D +V+ L+ ++ + D+ L R
Sbjct: 1391 IECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSRLEDSDISFPPTLFRVVR 1445
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1446 LARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1495
>sp|Q9UI33|SCNBA_HUMAN Sodium channel protein type 11 subunit alpha OS=Homo sapiens
GN=SCN11A PE=1 SV=2
Length = 1791
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 129/185 (69%), Gaps = 8/185 (4%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 61 GTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + +I + P I+ T++IFT I+ E
Sbjct: 1045 LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDIIFTHIFILE 1104
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y AW LDFI++ ++ T+ I+L L + RT R LR L+ ++
Sbjct: 1105 MVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRALRPLRALS 1159
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1160 QFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1203
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGIDLGNLAALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ + + + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
>sp|Q05973|SCN1_LOLBL Sodium channel protein 1 brain OS=Loligo bleekeri PE=2 SV=1
Length = 1522
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 125/187 (66%), Gaps = 11/187 (5%)
Query: 1 TFVVVSK---GKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TFVV+ K I RFSA +L++ P NPIRR+A+ I + F F++ TI+ NC+ +
Sbjct: 13 TFVVIEKRFKKNIIHRFSAKRSLFLFTPRNPIRRLAVCIATNVCFDYFLMFTIMINCVFL 72
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
MP E E IF GIYT E A+K++A GF ++ +TYLRDAWN LDF VI ++Y+T+
Sbjct: 73 AMPDIS--EFAEYIFLGIYTMEMAIKLVAGGFFIDKYTYLRDAWNCLDFTVIMISYITLL 130
Query: 118 ID------LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
+ + ++ LRTFRVLRAL+T++I+PGLKT+V A++ +++ L V+IL +F L +
Sbjct: 131 LQTINDKVISDITGLRTFRVLRALRTLSIIPGLKTMVNALLRALRMLISVLILILFCLWI 190
Query: 172 FALMGLQ 178
F+ G+Q
Sbjct: 191 FSQAGVQ 197
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIEST---------EVIFTGIY 76
+N RR + + + F ++ I + IL+ E ++ F ++
Sbjct: 768 WNNFRRQLMMVCENKYFETGVLVIIFASSILLAFEDIYLNEKPRLKLAIFYLDITFCLLF 827
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFI-----VIALAYVTMGID-LGNLAALRTFR 130
E +K++A GF+ Y W LDF VI+LA +G++ + +LRT R
Sbjct: 828 FLEMVLKLVALGFV----HYYTHFWTILDFTIVIITVISLAASGLGMEQITAFRSLRTLR 883
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ V+ G+K IV A++ S+ ++ +V+++ + +FA+MG+Q GK
Sbjct: 884 ALRPLRAVSRWQGMKIIVNALMLSIPSIFNVLLVCVVFWLIFAIMGVQLFAGK 936
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 26 FNPIRRVAIY---ILVHPLFSLFIITTILTNCILMIMPG-------TPTIESTEVIFTGI 75
+NP RV + I+ +FII I+ N + + M ++ +FT +
Sbjct: 394 YNPWLRVQSFAHCIITDSFTEVFIIFIIVLNTVFLAMEHHGMSMELKNVLKVANYVFTTV 453
Query: 76 YTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFRVLRA 134
+ E+ +K++A + Y + WN D +V+ + + +G++ L ++ R+FR+LR
Sbjct: 454 FVLEAILKLLAF-----NKQYFKSGWNICDLVVVVASLIDLGVEGLKGVSVFRSFRLLRV 508
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++ ++ +L + I+ + + +FA+ GLQ
Sbjct: 509 FHLAQSWTTMRLLLCIILNTLGSLGYLTIILIIVIYIFAVTGLQ 552
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-- 119
T + + + FT +Y E+ +K++ YLR+ WN DF+V+ L+ + ++
Sbjct: 1130 TEVLATANIAFTILYAVEAIIKIIGL-----RIHYLRNLWNVFDFLVVTLSVMDAFLNDI 1184
Query: 120 LGN--------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
G+ L R FR+ R ++ + G++ ++ A++ S+ L ++ L M + +
Sbjct: 1185 FGDGIFMNPSLLRVARMFRIGRIIRLIKWAKGMRKLLFALVISLPALFNIGALLMLVMFI 1244
Query: 172 FALMGL 177
+ ++G+
Sbjct: 1245 YTIIGM 1250
>sp|Q01118|SCN7A_HUMAN Sodium channel protein type 7 subunit alpha OS=Homo sapiens
GN=SCN7A PE=2 SV=2
Length = 1682
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 109/178 (61%), Gaps = 1/178 (0%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRF+A L L PFN IRR I +LVHP F LFI+ ++L +C+ M +
Sbjct: 79 TFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQLFILISVLIDCVFMSLT 138
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E GIYTFE VK+ ARG SF++L D WNWLDF V +
Sbjct: 139 NLPKWRPVLENTLLGIYTFEILVKLFARGVWAGSFSFLGDPWNWLDFSVTVFEVIIRYSP 198
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L + L+T R LR LK + + GLK++VG +I +K L VIILT+F LS+F+L+G+
Sbjct: 199 LDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIFSLIGM 256
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + ++ I++ P LF+I I+ N + + P + T
Sbjct: 476 YKFAKTFLIWNCSPCWLKLKEFVHRIIMAPFTDLFLIICIILNVCFLTLEHYPMSKQTNT 535
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++F GI+T E K++A + + Y + WN D +++ + + + ++
Sbjct: 536 LLNIGNLVFIGIFTAEMIFKIIA----MHPYGYFQVGWNIFDSMIVFHGLIELCLANVAG 591
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIIL 164
+A LR FR+LR K P + ++ ++ S L+D+++L
Sbjct: 592 MALLRLFRMLRIFKLGKYWPTFQILMWSLSNSWVALKDLVLL 633
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 29 IRRVAIYILVHPLFSLFI-ITTILTNCIL----MIMPGTPTI----ESTEVIFTGIYTFE 79
IR+ I+ + F FI + T+L+ L + M TI E ++IFT I+ E
Sbjct: 923 IRKTCCKIVENNWFKCFIGLVTLLSTGTLAFEDIYMDQRKTIKILLEYADMIFTYIFILE 982
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFRVLRALKTV 138
+K MA GF Y + W LDF+V+ + +++ G L L + + LR L+ +
Sbjct: 983 MLLKWMAYGFK----AYFSNGWYRLDFVVVIVFCLSLIGKTREELKPLISMKFLRPLRVL 1038
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ +K +V A+I++ +V ++ + +F++MG+
Sbjct: 1039 SQFERMKVVVRALIKTTLPTLNVFLVCLMIWLIFSIMGV 1077
>sp|Q05152|CAC1B_RABIT Voltage-dependent N-type calcium channel subunit alpha-1B
OS=Oryctolagus cuniculus GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 113 bits (282), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 105/181 (58%), Gaps = 12/181 (6%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTP 63
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P +
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+L +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKILALGFVLHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 110 bits (275), Expect = 5e-24, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 104/189 (55%), Gaps = 17/189 (8%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1134 SMFCLSPTNLLRRCCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSPRNNALKYMDY 1193
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+ +
Sbjct: 1194 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIK 1253
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK- 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1254 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1313
Query: 184 --KSDESHD 190
+DES +
Sbjct: 1314 FYCTDESKE 1322
Score = 63.5 bits (153), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1473 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1532
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + + NL+ LR FR R +K +
Sbjct: 1533 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1587
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1588 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1622
Score = 43.1 bits (100), Expect = 0.001, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 42 FSLFIITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTY 96
+++ + + T C+ M+ P +T E +F G++ E ++K+ G +Y
Sbjct: 487 WTVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSY 542
Query: 97 LRDAWNWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVG 149
R ++N DF VI A V G G ++ LR R+LR K L+ +V
Sbjct: 543 FRSSFNCFDFGVIVGSIFEVVWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVV 601
Query: 150 AVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+++ S+K++ ++ L + VFAL+G+Q
Sbjct: 602 SLLNSMKSIISLLFLLFLFIVVFALLGMQ 630
>sp|P56698|CAC1B_DIPOM Probable voltage-dependent N-type calcium channel subunit alpha-1B
OS=Diplobatis ommata PE=2 SV=1
Length = 2326
Score = 112 bits (281), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 17/190 (8%)
Query: 18 DALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTE 69
+++++ NP+RR YI+ F + I+ I + I + P ++ +
Sbjct: 1125 NSMFLFSTTNPVRRACHYIVNLRYFEMCILLVITMSSIALAAEDPVQGDAPRNNVLKYLD 1184
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNL 123
+FTG++TFE +K++ G IL +Y RD WN LDFIV++ A V + G DL +
Sbjct: 1185 YVFTGVFTFEMVIKMINLGLILHPGSYFRDLWNILDFIVVSGALVAFAFTGSRGKDLNTI 1244
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1245 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGK 1304
Query: 184 ---KSDESHD 190
+DES D
Sbjct: 1305 FFYCTDESKD 1314
Score = 108 bits (269), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTPTIEST 68
+L++ N IR+ A I P F I+ TI+ NCI++ + P + ++ T
Sbjct: 67 SLFIFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDT 126
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G D +L LR
Sbjct: 127 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTTIGTDF-DLRTLR 185
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 186 AVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGK 241
Score = 60.1 bits (144), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIM-------PGTPTIESTEVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M P ++ ++FT +++ E +K++ G
Sbjct: 1465 VVSPPFEYLIMALIALNTIVLMMKFYNAPDPYDRMLQYLNILFTFLFSMECVLKLIGFGV 1524
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + NL+ LR FR R +K +
Sbjct: 1525 L----NYFRDAWNVFDFVTV-LGSITDILVTELADSFINLSFLRLFRAARLIKLLRQGYT 1579
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1580 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1614
Score = 33.9 bits (76), Expect = 0.64, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-----LAYVTM 116
T + E +F G++ E ++K+ G Y ++N DF VI + + +
Sbjct: 501 TDALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSFNCFDFGVIVGSIFEVVWTAV 556
Query: 117 GIDLG-NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
D ++ LR R+LR K L+ +V +++ S+K++ ++ L + VFAL+
Sbjct: 557 KPDTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALL 616
Query: 176 GLQ 178
G+Q
Sbjct: 617 GMQ 619
>sp|P54282|CAC1A_RAT Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Rattus
norvegicus GN=Cacna1a PE=1 SV=1
Length = 2212
Score = 112 bits (281), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1174 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1233
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-------TMGIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+ +
Sbjct: 1234 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1293
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1294 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1353
Query: 184 ---KSDESHD 190
+DES +
Sbjct: 1354 FFHCTDESKE 1363
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTPTIEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P + ++ T
Sbjct: 79 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 138
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 139 EPYFIGIFCFEAGIKIVALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 197
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 198 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 253
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1514 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1573
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1574 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1628
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1629 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1663
Score = 33.5 bits (75), Expect = 0.77, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-------LAYVTMGIDLG 121
E IF G++ E +K+ G + Y ++N D VI A + G G
Sbjct: 525 EFIFLGLFMSEMFIKMYGLG----TRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFG 580
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ LR R+LR K L+ +V +++ S+K++ ++ L + VFAL+G+Q
Sbjct: 581 -ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQ 636
>sp|P27884|CAC1A_RABIT Voltage-dependent P/Q-type calcium channel subunit alpha-1A
OS=Oryctolagus cuniculus GN=CACNA1A PE=1 SV=1
Length = 2424
Score = 112 bits (281), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1232 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1291
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-------TMGIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+ +
Sbjct: 1292 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1351
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1352 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1411
Query: 184 ---KSDESHD 190
+DES +
Sbjct: 1412 FFHCTDESKE 1421
Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTPTIEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P + ++ T
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 136
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 137 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 195
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 251
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTPT-----IESTEVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M G ++ ++FT +++ E +KV+A G
Sbjct: 1572 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYDNALKVFNIVFTSLFSLECLLKVLAFGI 1631
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1632 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1686
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1687 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1721
Score = 33.5 bits (75), Expect = 0.85, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-------LAYVTMGIDLG 121
E IF G++ E +K+ G + Y ++N D VI A + G G
Sbjct: 523 EFIFLGLFMSEMFIKMYGLG----TRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFG 578
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ LR R+LR K L+ +V +++ S+K++ ++ L + VFAL+G+Q
Sbjct: 579 -ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQ 634
>sp|P97445|CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Mus
musculus GN=Cacna1a PE=1 SV=2
Length = 2368
Score = 112 bits (281), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1174 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1233
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-------TMGIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+ +
Sbjct: 1234 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1293
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1294 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1353
Query: 184 ---KSDESHD 190
+DES +
Sbjct: 1354 FFHCTDESKE 1363
Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTPTIEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P + ++ T
Sbjct: 79 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 138
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 139 EPYFIGIFCFEAGIKIVALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 197
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 198 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 253
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1514 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1573
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1574 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1628
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1629 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1663
Score = 33.5 bits (75), Expect = 0.93, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-------LAYVTMGIDLG 121
E IF G++ E +K+ G + Y ++N D VI A + G G
Sbjct: 525 EFIFLGLFMSEMFIKMYGLG----TRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFG 580
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ LR R+LR K L+ +V +++ S+K++ ++ L + VFAL+G+Q
Sbjct: 581 -ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQ 636
>sp|O00555|CAC1A_HUMAN Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Homo
sapiens GN=CACNA1A PE=1 SV=2
Length = 2505
Score = 112 bits (281), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1223 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1282
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-------TMGIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+ +
Sbjct: 1283 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1342
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1343 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1402
Query: 184 ---KSDESHD 190
+DES +
Sbjct: 1403 FFHCTDESKE 1412
Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTPTIEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P + ++ T
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 136
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 137 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 195
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 251
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1563 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1622
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1623 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1677
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1678 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1712
Score = 33.5 bits (75), Expect = 0.98, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-------LAYVTMGIDLG 121
E IF G++ E +K+ G + Y ++N D VI A + G G
Sbjct: 523 EFIFLGLFMSEMFIKMYGLG----TRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFG 578
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ LR R+LR K L+ +V +++ S+K++ ++ L + VFAL+G+Q
Sbjct: 579 -ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQ 634
>sp|O55017|CAC1B_MOUSE Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus
musculus GN=Cacna1b PE=1 SV=1
Length = 2327
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 104/181 (57%), Gaps = 12/181 (6%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTP 63
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P +
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 106 bits (265), Expect = 9e-23, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1118 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1177
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV----------TMGIDL 120
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+
Sbjct: 1178 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDI 1237
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q
Sbjct: 1238 NTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLF 1297
Query: 181 RGK---KSDESHD 190
+GK +DES +
Sbjct: 1298 KGKFFYCTDESKE 1310
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1461 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECILKIIAFGV 1520
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + + NL+ LR FR R +K +
Sbjct: 1521 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1575
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1576 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1610
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 547 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 605
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 606 MKSIISLLFLLFLFIVVFALLGMQ 629
>sp|Q00975|CAC1B_HUMAN Voltage-dependent N-type calcium channel subunit alpha-1B OS=Homo
sapiens GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 111 bits (277), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 104/181 (57%), Gaps = 12/181 (6%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTP 63
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P +
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 109 bits (273), Expect = 9e-24, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 104/189 (55%), Gaps = 17/189 (8%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1129 SMFCLSPTNLLRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDY 1188
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+ +
Sbjct: 1189 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1248
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK- 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1249 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1308
Query: 184 --KSDESHD 190
+DES +
Sbjct: 1309 FYCTDESKE 1317
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1468 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1527
Query: 90 ILESFTYLRDAWNWLDFIV-------IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ I + + + NL+ LR FR R +K +
Sbjct: 1528 L----NYFRDAWNVFDFVTVLGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQGY 1583
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1584 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1619
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 47 ITTILTNCILMIMPGTP-----TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T+ E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 547 NCFDFGVIVGSVFEVVWAAIKPGSSFG-ISVLRALRLLRIFKVTKYWSSLRNLVVSLLNS 605
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 606 MKSIISLLFLLFLFIVVFALLGMQ 629
>sp|Q02294|CAC1B_RAT Voltage-dependent N-type calcium channel subunit alpha-1B OS=Rattus
norvegicus GN=Cacna1b PE=1 SV=1
Length = 2336
Score = 110 bits (276), Expect = 5e-24, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 104/181 (57%), Gaps = 12/181 (6%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTP 63
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P +
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTEILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 106 bits (265), Expect = 9e-23, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1127 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1186
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV----------TMGIDL 120
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V + G D+
Sbjct: 1187 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDI 1246
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q
Sbjct: 1247 NTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLF 1306
Query: 181 RGK---KSDESHD 190
+GK +DES +
Sbjct: 1307 KGKFFYCTDESKE 1319
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1470 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGV 1529
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + + NL+ LR FR R +K
Sbjct: 1530 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLCRQGYT 1584
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1585 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1619
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 492 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 547
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 548 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 606
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 607 MKSIISLLFLLFLFIVVFALLGMQ 630
>sp|P56699|CAC1E_DIPOM Probable voltage-dependent R-type calcium channel subunit alpha-1E
OS=Diplobatis ommata PE=2 SV=1
Length = 2223
Score = 110 bits (275), Expect = 6e-24, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 102/180 (56%), Gaps = 10/180 (5%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTP 63
+A +L++ N +R+ A ++ P F I+ TI+ NC+++ + P
Sbjct: 76 LTANRSLFLFGEDNIVRKSARRVIEWPPFEYMILATIIANCVVLALEQHLPNGDKTPMAK 135
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
++E TE F GI+ FE+ +K++A GF+ +YLR+ WN +DFIV+ + NL
Sbjct: 136 SLEQTEPYFIGIFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGLLATAATHFNL 195
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 RTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYYGK 255
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 21/195 (10%)
Query: 7 KGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE 66
K K I +++ +++ NPIRRV +I+ F + I+ I + + + +
Sbjct: 1075 KSKAIIPYTS---MFLFRKTNPIRRVCHFIVNLRYFEMCILLVIAASSVALAAEDPIHKD 1131
Query: 67 ST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
S + +FTG++TFE +K++ G + +Y RD WN LDFIV++ A V
Sbjct: 1132 SARNQVLRYFDYVFTGVFTFEMVIKMIDIGLVFHEGSYFRDVWNILDFIVVSGALVAFAF 1191
Query: 117 --------GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
G D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+
Sbjct: 1192 TNLIGGSSGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLF 1251
Query: 169 LSVFALMGLQDSRGK 183
+ +FA++ +Q +GK
Sbjct: 1252 MFIFAVIAVQLFKGK 1266
Score = 62.4 bits (150), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 37 LVHPLFSLFIITTILTNCILMIM------PGTPTI-ESTEVIFTGIYTFESAVKVMARGF 89
+V P F I+T I N ++++M PG ++ + + FT +T E +K++A GF
Sbjct: 1426 VVSPSFEYTILTMIALNTVVLMMKHHSPPPGFASVLKLMNIAFTITFTLECILKIIAFGF 1485
Query: 90 ILESFTYLRDAWNWLDFIVIA-----LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGL 144
+ Y RD+WN DF+ + + + NL+ L+ FR R +K + +
Sbjct: 1486 L----NYFRDSWNVFDFVTVVGSISEIIVTECNLKFVNLSFLKLFRAARLIKLLRQGITI 1541
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ ++ ++S K L V +L ++A++G+Q
Sbjct: 1542 RILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1575
>sp|Q61290|CAC1E_MOUSE Voltage-dependent R-type calcium channel subunit alpha-1E OS=Mus
musculus GN=Cacna1e PE=1 SV=1
Length = 2272
Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 105/184 (57%), Gaps = 14/184 (7%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTP 63
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P +
Sbjct: 64 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 123
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 124 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 183
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L ALR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 184 HVDLRALRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 243
Query: 180 SRGK 183
GK
Sbjct: 244 YSGK 247
Score = 100 bits (248), Expect = 8e-21, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 39/202 (19%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT--------PTIESTE- 69
++++ NPIRR YI+ F + CIL+++ + P + ++E
Sbjct: 1135 SMFIFSTTNPIRRACHYIVNLRYFEM---------CILLVIAASSIALAAEDPVLTNSER 1185
Query: 70 --------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----- 116
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V
Sbjct: 1186 NKVLRYFDYVFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANA 1245
Query: 117 -----GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
G D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +
Sbjct: 1246 LGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFI 1305
Query: 172 FALMGLQDSRGK---KSDESHD 190
FA++ +Q +GK +D S D
Sbjct: 1306 FAVIAVQLFKGKFFYCTDSSKD 1327
Score = 57.0 bits (136), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 35 YILVHPLFSLFIITTILTNCILMIM-----PGT--PTIESTEVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T ++ + FT +++ E +KV+A
Sbjct: 1476 HFVVSPSFEYTIMAMIALNTVVLMMKYYTAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1535
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG--------NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + + + + N++ L+ FR R +K +
Sbjct: 1536 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1591
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSD-ESH 189
++ ++ ++S K L V +L ++A++G+Q K D ESH
Sbjct: 1592 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1642
>sp|Q02343|CAC1E_RABIT Voltage-dependent R-type calcium channel subunit alpha-1E
OS=Oryctolagus cuniculus GN=CACNA1E PE=2 SV=1
Length = 2259
Score = 107 bits (267), Expect = 4e-23, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 14/184 (7%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----------PGTP 63
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P +
Sbjct: 63 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 122
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 123 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 182
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 183 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 242
Query: 180 SRGK 183
GK
Sbjct: 243 YSGK 246
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 39/202 (19%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT--------PTIESTE- 69
++++ NPIRR Y++ F + CIL+++ + P + ++E
Sbjct: 1122 SMFIFSTSNPIRRACHYVVNLRYFEM---------CILLVIAASSIALAAEDPVLTNSER 1172
Query: 70 --------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----- 116
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V
Sbjct: 1173 NRVLRYFDYVFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANA 1232
Query: 117 -----GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
G D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +
Sbjct: 1233 LGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFI 1292
Query: 172 FALMGLQDSRGK---KSDESHD 190
FA++ +Q +GK +D S D
Sbjct: 1293 FAVIAVQLFKGKFFYCTDSSKD 1314
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 19/159 (11%)
Query: 35 YILVHPLFSLFIITTILTNCILMIM-----PGT--PTIESTEVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T ++ + FT +++ E +KV+A
Sbjct: 1463 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1522
Query: 88 GFILESFTYLRDAWNWLDFIV-------IALAYVTMGIDLG-NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI I L + G N++ L+ FR R +K +
Sbjct: 1523 GFV----NYFRDTWNIFDFITVIGSITEIVLTDSKLVNTTGFNMSFLKLFRAARLIKLLR 1578
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1579 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1617
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.142 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,104,516
Number of Sequences: 539616
Number of extensions: 2161543
Number of successful extensions: 6771
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 6049
Number of HSP's gapped (non-prelim): 409
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)