Your job contains 1 sequence.
>psy14955
TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP
GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS
RGKKSDESHDK
The BLAST search returned 20 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14955
(191 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0264255 - symbol:para "paralytic" species:7227 "Dr... 840 2.1e-82 1
UNIPROTKB|A8K0U1 - symbol:SCN2A "cDNA FLJ75537, highly si... 619 1.9e-60 1
UNIPROTKB|E1C4R5 - symbol:SCN1A "Uncharacterized protein"... 630 4.4e-60 1
RGD|69364 - symbol:Scn1a "sodium channel, voltage-gated, ... 630 4.4e-60 1
UNIPROTKB|P35498 - symbol:SCN1A "Sodium channel protein t... 630 4.4e-60 1
UNIPROTKB|F1NMI3 - symbol:SCN3A "Uncharacterized protein"... 622 8.3e-60 1
UNIPROTKB|E7EUE6 - symbol:SCN3A "Sodium channel protein t... 624 8.6e-60 1
RGD|3635 - symbol:Scn3a "sodium channel, voltage-gated, t... 625 1.4e-59 1
UNIPROTKB|E1C4S3 - symbol:SCN1A "Uncharacterized protein"... 625 1.5e-59 1
UNIPROTKB|F1PXD7 - symbol:SCN1A "Uncharacterized protein"... 620 5.1e-59 1
UNIPROTKB|F1LLV9 - symbol:Scn2a1 "Protein Scn2a1" species... 619 6.2e-59 1
ZFIN|ZDB-GENE-000828-1 - symbol:scn8aa "sodium channel, v... 619 6.2e-59 1
UNIPROTKB|Q99250 - symbol:SCN2A "Sodium channel protein t... 619 6.6e-59 1
UNIPROTKB|Q9NY46 - symbol:SCN3A "Sodium channel protein t... 618 8.4e-59 1
UNIPROTKB|E1BMH1 - symbol:SCN2A "Uncharacterized protein"... 618 8.4e-59 1
UNIPROTKB|E2R036 - symbol:SCN2A "Uncharacterized protein"... 618 8.4e-59 1
MGI|MGI:98250 - symbol:Scn4a "sodium channel, voltage-gat... 617 9.2e-59 1
RGD|3636 - symbol:Scn4a "sodium channel, voltage-gated, t... 616 1.2e-58 1
UNIPROTKB|P15390 - symbol:Scn4a "Sodium channel protein t... 616 1.2e-58 1
UNIPROTKB|F8VRN5 - symbol:SCN8A "Sodium channel protein t... 608 1.2e-58 1
UNIPROTKB|F1LNI1 - symbol:Scn2a1 "Protein Scn2a1" species... 614 2.2e-58 1
UNIPROTKB|E1C6G0 - symbol:E1C6G0 "Uncharacterized protein... 613 2.4e-58 1
UNIPROTKB|E1BQT8 - symbol:SCN9A "Uncharacterized protein"... 599 2.5e-58 1
UNIPROTKB|F1LTY8 - symbol:Scn8a "Sodium channel protein t... 607 3.9e-58 1
UNIPROTKB|F1SGK6 - symbol:SCN8A "Uncharacterized protein"... 611 4.6e-58 1
UNIPROTKB|F1S1Y9 - symbol:SCN3A "Uncharacterized protein"... 610 6.0e-58 1
ZFIN|ZDB-GENE-060908-2 - symbol:scn12aa "sodium channel, ... 609 7.1e-58 1
UNIPROTKB|Q15858 - symbol:SCN9A "Sodium channel protein t... 609 7.5e-58 1
RGD|3632 - symbol:Scn2a1 "sodium channel, voltage-gated, ... 609 7.6e-58 1
UNIPROTKB|F1LR08 - symbol:Scn8a "Sodium channel protein t... 607 8.7e-58 1
UNIPROTKB|E9PSN8 - symbol:Scn8a "Sodium channel protein t... 608 9.5e-58 1
MGI|MGI:103169 - symbol:Scn8a "sodium channel, voltage-ga... 608 9.5e-58 1
RGD|3638 - symbol:Scn8a "sodium channel, voltage gated, t... 608 9.5e-58 1
MGI|MGI:107636 - symbol:Scn9a "sodium channel, voltage-ga... 608 9.6e-58 1
UNIPROTKB|E9PF08 - symbol:SCN9A "Sodium channel protein t... 608 9.6e-58 1
UNIPROTKB|F1LMT6 - symbol:Scn8a "Sodium channel protein t... 607 1.1e-57 1
UNIPROTKB|F1LMH2 - symbol:Scn8a "Sodium channel protein t... 607 1.1e-57 1
UNIPROTKB|H9KZD1 - symbol:SCN8A "Uncharacterized protein"... 607 1.2e-57 1
UNIPROTKB|F1LNF5 - symbol:Scn5a "Sodium channel protein t... 607 1.3e-57 1
UNIPROTKB|J3QQZ1 - symbol:SCN4A "Sodium channel protein t... 606 1.4e-57 1
UNIPROTKB|P35499 - symbol:SCN4A "Sodium channel protein t... 606 1.4e-57 1
UNIPROTKB|F1Q384 - symbol:SCN3A "Uncharacterized protein"... 606 1.6e-57 1
UNIPROTKB|E2R0F0 - symbol:SCN8A "Uncharacterized protein"... 605 2.0e-57 1
RGD|69368 - symbol:Scn9a "sodium channel, voltage-gated, ... 605 2.0e-57 1
UNIPROTKB|E2RR09 - symbol:SCN4A "Uncharacterized protein"... 604 2.2e-57 1
ZFIN|ZDB-GENE-060908-3 - symbol:scn12ab "sodium channel, ... 604 2.5e-57 1
UNIPROTKB|K4DIA1 - symbol:SCN5A "Sodium channel protein t... 604 2.5e-57 1
UNIPROTKB|F1NDB7 - symbol:SCN5A "Uncharacterized protein"... 604 2.5e-57 1
UNIPROTKB|E9PHB6 - symbol:SCN5A "Sodium channel protein t... 604 2.5e-57 1
UNIPROTKB|E9PG18 - symbol:SCN5A "Sodium channel protein t... 604 2.6e-57 1
UNIPROTKB|H9KVD2 - symbol:SCN5A "Sodium channel protein t... 604 2.6e-57 1
UNIPROTKB|F1MHP0 - symbol:SCN5A "Uncharacterized protein"... 604 2.6e-57 1
UNIPROTKB|F8VWM7 - symbol:SCN8A "Sodium channel protein t... 602 2.6e-57 1
UNIPROTKB|F1N8I1 - symbol:SCN5A "Uncharacterized protein"... 604 2.7e-57 1
UNIPROTKB|F1NDB8 - symbol:SCN5A "Uncharacterized protein"... 604 2.7e-57 1
UNIPROTKB|F1RPN2 - symbol:SCN2A "Uncharacterized protein"... 603 3.3e-57 1
UNIPROTKB|F1MMU9 - symbol:SCN8A "Uncharacterized protein"... 602 4.1e-57 1
UNIPROTKB|Q9UQD0 - symbol:SCN8A "Sodium channel protein t... 602 4.1e-57 1
UNIPROTKB|E1B9G2 - symbol:SCN3A "Uncharacterized protein"... 602 4.2e-57 1
UNIPROTKB|E1BHR8 - symbol:SCN3A "Uncharacterized protein"... 602 4.2e-57 1
UNIPROTKB|F1LS56 - symbol:Scn8a "Sodium channel protein t... 601 4.9e-57 1
UNIPROTKB|H9KZS2 - symbol:SCN8A "Uncharacterized protein"... 601 5.3e-57 1
UNIPROTKB|E9PBA5 - symbol:SCN9A "Sodium channel protein t... 600 6.8e-57 1
UNIPROTKB|F1NN72 - symbol:SCN2A "Uncharacterized protein"... 600 6.9e-57 1
UNIPROTKB|E9PTC1 - symbol:Scn5a "Sodium channel protein t... 599 8.6e-57 1
UNIPROTKB|E1C4S2 - symbol:SCN2A "Uncharacterized protein"... 599 8.8e-57 1
ZFIN|ZDB-GENE-060906-1 - symbol:scn1lab "sodium channel, ... 599 8.8e-57 1
MGI|MGI:98251 - symbol:Scn5a "sodium channel, voltage-gat... 599 9.0e-57 1
RGD|3637 - symbol:Scn5a "sodium channel, voltage-gated, t... 599 9.0e-57 1
UNIPROTKB|E2R0P1 - symbol:SCN9A "Uncharacterized protein"... 598 1.1e-56 1
UNIPROTKB|E7ET19 - symbol:SCN5A "Sodium channel protein t... 596 1.8e-56 1
UNIPROTKB|Q14524 - symbol:SCN5A "Sodium channel protein t... 596 1.9e-56 1
UNIPROTKB|E1B9X0 - symbol:LOC517426 "Uncharacterized prot... 593 3.3e-56 1
UNIPROTKB|E1BQT2 - symbol:SCN2A "Uncharacterized protein"... 592 5.0e-56 1
UNIPROTKB|F1SJS9 - symbol:SCN5A "Uncharacterized protein"... 592 5.0e-56 1
ZFIN|ZDB-GENE-051201-2 - symbol:scn4aa "sodium channel, v... 590 6.9e-56 1
ZFIN|ZDB-GENE-060906-2 - symbol:scn8ab "sodium channel, v... 590 7.7e-56 1
ZFIN|ZDB-GENE-051201-1 - symbol:scn4ab "sodium channel, v... 582 4.7e-55 1
UNIPROTKB|F1LMV4 - symbol:Scn5a "Sodium channel protein t... 580 9.4e-55 1
UNIPROTKB|Q2MZF0 - symbol:SCN5A "Voltage-gated sodium cha... 564 1.3e-54 1
UNIPROTKB|F1PGU3 - symbol:SCN5A "Uncharacterized protein"... 577 2.0e-54 1
ZFIN|ZDB-GENE-040426-751 - symbol:scn1a "sodium channel, ... 572 6.4e-54 1
UNIPROTKB|F1LPK3 - symbol:Scn5a "Sodium channel protein t... 572 6.7e-54 1
UNIPROTKB|F1M9G9 - symbol:Scn2a1 "Protein Scn2a1" species... 567 2.3e-53 1
UNIPROTKB|F1M7F6 - symbol:Scn2a1 "Protein Scn2a1" species... 566 2.8e-53 1
UNIPROTKB|Q9Y5Y9 - symbol:SCN10A "Sodium channel protein ... 565 3.5e-53 1
UNIPROTKB|G3MYM1 - symbol:SCN10A "Uncharacterized protein... 559 1.5e-52 1
UNIPROTKB|F1SJS7 - symbol:SCN10A "Uncharacterized protein... 556 3.2e-52 1
RGD|3629 - symbol:Scn10a "sodium channel, voltage-gated, ... 552 8.6e-52 1
UNIPROTKB|Q62968 - symbol:Scn10a "Sodium channel protein ... 552 8.6e-52 1
UNIPROTKB|E1BXV5 - symbol:Gga.561 "Uncharacterized protei... 549 1.4e-51 1
UNIPROTKB|E1C4C2 - symbol:Gga.561 "Uncharacterized protei... 549 1.5e-51 1
MGI|MGI:108029 - symbol:Scn10a "sodium channel, voltage-g... 548 2.3e-51 1
UNIPROTKB|E2QUG1 - symbol:SCN10A "Sodium channel protein ... 534 7.1e-50 1
UNIPROTKB|O46669 - symbol:SCN10A "Sodium channel protein ... 529 2.4e-49 1
MGI|MGI:1345149 - symbol:Scn11a "sodium channel, voltage-... 493 1.4e-45 1
RGD|3630 - symbol:Scn11a "sodium channel, voltage-gated, ... 477 7.0e-44 1
UNIPROTKB|F1M9X1 - symbol:Scn11a "Sodium channel protein ... 477 7.0e-44 1
UNIPROTKB|J9PAI1 - symbol:SCN11A "Uncharacterized protein... 475 1.2e-43 1
FB|FBgn0085434 - symbol:NaCP60E "Na channel protein 60E" ... 477 1.4e-43 1
WARNING: Descriptions of 283 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0264255 [details] [associations]
symbol:para "paralytic" species:7227 "Drosophila
melanogaster" [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007638 "mechanosensory behavior" evidence=IMP] [GO:0009612
"response to mechanical stimulus" evidence=IGI;IMP] [GO:0006814
"sodium ion transport" evidence=NAS;IDA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=ISS;NAS;IDA] [GO:0005887
"integral to plasma membrane" evidence=NAS;IDA] [GO:0046684
"response to pyrethroid" evidence=NAS;IMP] [GO:0046680 "response to
DDT" evidence=IDA;NAS;IMP] [GO:0045433 "male courtship behavior,
veined wing generated song production" evidence=NAS;IMP]
[GO:0001518 "voltage-gated sodium channel complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0001666 "response to hypoxia" evidence=IDA] InterPro:IPR001696
InterPro:IPR002048 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50222
GO:GO:0005887 GO:GO:0007268 EMBL:AE014298 GO:GO:0001666
GO:GO:0005248 GO:GO:0045433 eggNOG:COG1226 GO:GO:0046680
GO:GO:0046684 GO:GO:0007638 ChiTaRS:Prm GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 GeneTree:ENSGT00650000092939
EMBL:U26713 EMBL:U26714 EMBL:U26715 EMBL:U26716 EMBL:U26717
EMBL:M32078 EMBL:AB008113 EMBL:AB035812 PIR:A30302 PIR:A33299
RefSeq:NP_001036280.1 RefSeq:NP_001036281.1 RefSeq:NP_001188616.1
RefSeq:NP_523371.2 ProteinModelPortal:P35500 SMR:P35500
IntAct:P35500 STRING:P35500 PaxDb:P35500 EnsemblMetazoa:FBtr0074298
GeneID:32619 KEGG:dme:Dmel_CG9907 UCSC:CG9907-RA CTD:32619
FlyBase:FBgn0260993 InParanoid:P35500 KO:K05388 OrthoDB:EOG4FJ6QK
GenomeRNAi:32619 NextBio:779491 Bgee:P35500 GermOnline:CG9907
Uniprot:P35500
Length = 2131
Score = 840 (300.8 bits), Expect = 2.1e-82, P = 2.1e-82
Identities = 168/178 (94%), Positives = 173/178 (97%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVVVSKGKDIFRFSA+ A+W+LDPFNPIRRVAIYILVHPLFSLFIITTIL NCILMIMP
Sbjct: 114 TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMP 173
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
TPT+ESTEVIFTGIYTFESAVKVMARGFIL FTYLRDAWNWLDF+VIALAYVTMGIDL
Sbjct: 174 TTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMGIDL 233
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ
Sbjct: 234 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 291
Score = 186 (70.5 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 59/199 (29%), Positives = 99/199 (49%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
V+ KG D+F D WV F V++ I+ P LFI I+ N + M M
Sbjct: 787 VILKGIDVF--CVWDCCWVWLKFQ--EWVSL-IVFDPFVELFITLCIVVNTMFMAMDHHD 841
Query: 64 -------TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
++S FT + E+ +K+MA + Y ++ WN DFI++AL+ + +
Sbjct: 842 MNKEMERVLKSGNYFFTATFAIEATMKLMA----MSPKYYFQEGWNIFDFIIVALSLLEL 897
Query: 117 GID-LGNLAALRTFRVLRALKTVAIVPGLK---TIVGAVIESVKNLRDVIILTMFSLSVF 172
G++ + L+ LR+FR+LR K P L +I+G + ++ NL V+ + +F +F
Sbjct: 898 GLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIF---IF 954
Query: 173 ALMGLQDSRGKKSDESHDK 191
A+MG+Q GK + D+
Sbjct: 955 AVMGMQ-LFGKNYHDHKDR 972
Score = 177 (67.4 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 44/170 (25%), Positives = 92/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM-----PGTPTIEST----EVIFTGIYTFE 79
+R ++ + F +IT IL + + + + P P ++ + IFT I+ E
Sbjct: 1290 LRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLE 1349
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALA---YVTMGIDLGNLAALRTFRVLRALK 136
+K +A GF + Y +AW WLDF+++ ++ +V + G + A +T R LRAL+
Sbjct: 1350 MLIKWLALGFKV----YFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALR 1405
Query: 137 ---TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ + G++ +V A+++++ ++ +V+++ + +FA+MG+Q GK
Sbjct: 1406 PLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGK 1455
>UNIPROTKB|A8K0U1 [details] [associations]
symbol:SCN2A "cDNA FLJ75537, highly similar to Homo sapiens
sodium channel, voltage-gated, type II, alpha 2 (SCN2A2), mRNA"
species:9606 "Homo sapiens" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 GO:GO:0016021 GO:GO:0006915
GO:GO:0014704 GO:GO:0007399 GO:GO:0030424 GO:GO:0030315
GO:GO:0005248 EMBL:AC011303 EMBL:AC013438 UniGene:Hs.93485
HGNC:HGNC:10588 ChiTaRS:SCN2A HOVERGEN:HBG091796 EMBL:AK289656
IPI:IPI00917060 STRING:A8K0U1 Ensembl:ENST00000424833
HOGENOM:HOG000199493 Uniprot:A8K0U1
Length = 503
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 119/179 (66%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
>UNIPROTKB|E1C4R5 [details] [associations]
symbol:SCN1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IEA] [GO:0019227 "neuronal
action potential propagation" evidence=IEA] [GO:0019228 "regulation
of action potential in neuron" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] [GO:0030315 "T-tubule" evidence=IEA] [GO:0033268
"node of Ranvier" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043194 "axon initial segment" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008051 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01664
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 InterPro:IPR024583
Pfam:PF11933 EMBL:AADN02020300 EMBL:AADN02020299 IPI:IPI00915192
Ensembl:ENSGALT00000017814 ArrayExpress:E1C4R5 Uniprot:E1C4R5
Length = 2006
Score = 630 (226.8 bits), Expect = 4.4e-60, P = 4.4e-60
Identities = 120/179 (67%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 186 (70.5 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
++F+ +W P + ++ + +++ P L I I+ N + M M P T E
Sbjct: 744 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 803
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 804 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 859
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 860 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 915
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1210 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1269
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1270 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1325
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1326 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1375
>RGD|69364 [details] [associations]
symbol:Scn1a "sodium channel, voltage-gated, type I, alpha"
species:10116 "Rattus norvegicus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA;IDA] [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA;IC;ISO;IMP;IDA;TAS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006814 "sodium ion transport"
evidence=ISO] [GO:0007628 "adult walking behavior" evidence=ISO]
[GO:0014704 "intercalated disc" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0019227 "neuronal action potential propagation"
evidence=ISO] [GO:0019228 "regulation of action potential in neuron"
evidence=ISO;IMP;IDA;TAS] [GO:0030018 "Z disc" evidence=ISO;ISS]
[GO:0030315 "T-tubule" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0031402 "sodium ion binding" evidence=IDA]
[GO:0033268 "node of Ranvier" evidence=ISO] [GO:0034706 "sodium
channel complex" evidence=ISO] [GO:0034765 "regulation of ion
transmembrane transport" evidence=ISO] [GO:0035725 "sodium ion
transmembrane transport" evidence=ISO] [GO:0042391 "regulation of
membrane potential" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043194 "axon initial segment" evidence=ISO]
[GO:0050884 "neuromuscular process controlling posture"
evidence=ISO] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008051 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01664
PROSITE:PS50096 SMART:SM00015 RGD:69364 GO:GO:0014704 GO:GO:0030018
GO:GO:0043025 GO:GO:0030315 GO:GO:0019228 GO:GO:0043194
GO:GO:0033268 GO:GO:0007628 GO:GO:0005248 GO:GO:0031402
eggNOG:COG1226 GO:GO:0019227 GO:GO:0050884 HOGENOM:HOG000231755
GO:GO:0001518 CTD:6323 HOVERGEN:HBG053100 KO:K04833
OrthoDB:EOG4Z36CT InterPro:IPR024583 Pfam:PF11933 EMBL:X03638
EMBL:M22253 IPI:IPI00198841 PIR:A25019 RefSeq:NP_110502.1
UniGene:Rn.32079 ProteinModelPortal:P04774 STRING:P04774
PRIDE:P04774 GeneID:81574 KEGG:rno:81574 UCSC:RGD:69364
BindingDB:P04774 ChEMBL:CHEMBL4906 NextBio:615093
ArrayExpress:P04774 Genevestigator:P04774 Uniprot:P04774
Length = 2009
Score = 630 (226.8 bits), Expect = 4.4e-60, P = 4.4e-60
Identities = 120/179 (67%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 185 (70.2 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 45/176 (25%), Positives = 90/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNH 798
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>UNIPROTKB|P35498 [details] [associations]
symbol:SCN1A "Sodium channel protein type 1 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0014704 "intercalated disc" evidence=IEA]
[GO:0019227 "neuronal action potential propagation" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0030315 "T-tubule" evidence=IEA] [GO:0033268
"node of Ranvier" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043194 "axon initial segment" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=NAS] [GO:0006814 "sodium ion transport" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0030018 "Z
disc" evidence=ISS] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008051 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01664
PROSITE:PS50096 SMART:SM00015 GO:GO:0016021 Reactome:REACT_111045
GO:GO:0014704 GO:GO:0030018 GO:GO:0043025 GO:GO:0030315
GO:GO:0019228 DrugBank:DB00909 GO:GO:0043194 GO:GO:0033268
GO:GO:0007628 GO:GO:0005248 GO:GO:0031402 Orphanet:569
eggNOG:COG1226 DrugBank:DB01202 GO:GO:0019227 DrugBank:DB00273
GO:GO:0050884 DrugBank:DB00252 DrugBank:DB00555 Orphanet:36387
MIM:607208 Orphanet:33069 HOGENOM:HOG000231755 GO:GO:0001518
EMBL:AF225985 EMBL:AY043484 EMBL:AB093548 EMBL:AB093549
EMBL:AB098335 EMBL:AC010127 EMBL:S71446 EMBL:X65362 EMBL:M91803
IPI:IPI00018934 IPI:IPI00748990 IPI:IPI00917812 PIR:I52964
PIR:S29184 RefSeq:NP_001159435.1 RefSeq:NP_001189364.1
RefSeq:NP_008851.3 UniGene:Hs.22654 ProteinModelPortal:P35498
SMR:P35498 DIP:DIP-59851N IntAct:P35498 STRING:P35498
TCDB:1.A.1.10.7 PhosphoSite:P35498 DMDM:12644229 PaxDb:P35498
PRIDE:P35498 Ensembl:ENST00000303395 Ensembl:ENST00000375405
Ensembl:ENST00000409050 Ensembl:ENST00000423058 GeneID:6323
KEGG:hsa:6323 UCSC:uc002udo.4 UCSC:uc021vsb.1 CTD:6323
GeneCards:GC02M166809 HGNC:HGNC:10585 HPA:HPA034686 MIM:182389
MIM:604403 MIM:609634 neXtProt:NX_P35498 Orphanet:293181
PharmGKB:PA301 HOVERGEN:HBG053100 InParanoid:P35498 KO:K04833
OMA:TVFEFDW OrthoDB:EOG4Z36CT BindingDB:P35498 ChEMBL:CHEMBL1845
DrugBank:DB01121 GenomeRNAi:6323 NextBio:24538 ArrayExpress:P35498
Bgee:P35498 CleanEx:HS_SCN1A Genevestigator:P35498
GermOnline:ENSG00000144285 InterPro:IPR024583 Pfam:PF11933
Uniprot:P35498
Length = 2009
Score = 630 (226.8 bits), Expect = 4.4e-60, P = 4.4e-60
Identities = 120/179 (67%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 184 (69.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 46/176 (26%), Positives = 91/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++FS +W P+ ++ V +++ P L I I+ N + M M P T +
Sbjct: 739 YKFSNIFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNN 798
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 799 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1207 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1266
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1267 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1322
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1323 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1372
>UNIPROTKB|F1NMI3 [details] [associations]
symbol:SCN3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520
Pfam:PF06512 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
EMBL:AADN02020305 IPI:IPI00593419 Ensembl:ENSGALT00000017981
OMA:GRTRDIG Uniprot:F1NMI3
Length = 1149
Score = 622 (224.0 bits), Expect = 8.3e-60, P = 8.3e-60
Identities = 121/181 (66%), Positives = 150/181 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT AL++L PFNPIR++AI ILVH LFS+ I+ TILTNC+ M
Sbjct: 97 TFIVLNKGKAIFRFSATSALYILTPFNPIRKIAIKILVHSSTLFSMLIMCTILTNCVFMT 156
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT
Sbjct: 157 MSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEGFTFLRDPWNWLDFSVILMAYVTEF 216
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 217 VDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 276
Query: 178 Q 178
Q
Sbjct: 277 Q 277
Score = 197 (74.4 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 48/176 (27%), Positives = 94/176 (53%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ T +W P+ ++ V +++ P L I I+ N + M M P T S
Sbjct: 744 YRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 803
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 804 VLSVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 859
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 860 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 915
>UNIPROTKB|E7EUE6 [details] [associations]
symbol:SCN3A "Sodium channel protein type 3 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933 EMBL:AC013463
IPI:IPI00397861 HGNC:HGNC:10590 ProteinModelPortal:E7EUE6
SMR:E7EUE6 Ensembl:ENST00000440431 UCSC:uc002uda.1
ArrayExpress:E7EUE6 Bgee:E7EUE6 Uniprot:E7EUE6
Length = 1364
Score = 624 (224.7 bits), Expect = 8.6e-60, P = 8.6e-60
Identities = 118/179 (65%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 189 (71.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P T S
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 741
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 175 (66.7 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>RGD|3635 [details] [associations]
symbol:Scn3a "sodium channel, voltage-gated, type III, alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA;IDA;TAS] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA;IDA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005516 "calmodulin binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007399 "nervous system
development" evidence=IEP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0019228
"regulation of action potential in neuron" evidence=IDA] [GO:0019233
"sensory perception of pain" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0031402 "sodium ion binding" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0046684 "response
to pyrethroid" evidence=IDA] [GO:0071236 "cellular response to
antibiotic" evidence=IDA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 RGD:3635 GO:GO:0007399
GO:GO:0009611 GO:GO:0071236 GO:GO:0019233 GO:GO:0030424 GO:GO:0043025
GO:GO:0005516 GO:GO:0019228 GO:GO:0005248 GO:GO:0031402
eggNOG:COG1226 GO:GO:0046684 GO:GO:0001518 HOVERGEN:HBG053100
InterPro:IPR024583 Pfam:PF11933 CTD:6328 KO:K04836 EMBL:Y00766
IPI:IPI00208201 PIR:S00320 RefSeq:NP_037251.1 UniGene:Rn.87394
PDB:1QG9 PDBsum:1QG9 ProteinModelPortal:P08104 STRING:P08104
TCDB:1.A.1.10.1 PRIDE:P08104 GeneID:497770 KEGG:rno:497770
BRENDA:2.4.1.19 BindingDB:P08104 ChEMBL:CHEMBL4966
EvolutionaryTrace:P08104 NextBio:697756 Genevestigator:P08104
Uniprot:P08104
Length = 1951
Score = 625 (225.1 bits), Expect = 1.4e-59, P = 1.4e-59
Identities = 119/179 (66%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFVVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 189 (71.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P T S
Sbjct: 682 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTQQFSS 741
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 742 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 797
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 798 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 853
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1146 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1205
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1206 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1261
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1262 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1311
>UNIPROTKB|E1C4S3 [details] [associations]
symbol:SCN1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008051 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01664
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 InterPro:IPR024583
Pfam:PF11933 EMBL:AADN02020300 EMBL:AADN02020299 IPI:IPI00596589
Ensembl:ENSGALT00000017808 ArrayExpress:E1C4S3 Uniprot:E1C4S3
Length = 1984
Score = 625 (225.1 bits), Expect = 1.5e-59, P = 1.5e-59
Identities = 119/179 (66%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH LFS+ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 186 (70.5 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
++F+ +W P + ++ + +++ P L I I+ N + M M P T E
Sbjct: 737 YKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDEFNN 796
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ D+
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLADVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1203 LRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1262
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1263 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1318
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1319 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1368
>UNIPROTKB|F1PXD7 [details] [associations]
symbol:SCN1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA] [GO:0043194 "axon initial segment"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0033268 "node of Ranvier" evidence=IEA] [GO:0030315 "T-tubule"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0019227 "neuronal action potential propagation" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008051
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01664 SMART:SM00015 GO:GO:0014704 GO:GO:0043025
GO:GO:0030315 GO:GO:0019228 GO:GO:0035725 GO:GO:0043194
GO:GO:0033268 GO:GO:0007628 GO:GO:0005248 GO:GO:0019227
GO:GO:0050884 GO:GO:0001518 GeneTree:ENSGT00560000076721
OMA:TVFEFDW InterPro:IPR024583 Pfam:PF11933 EMBL:AAEX03017732
Ensembl:ENSCAFT00000018258 Uniprot:F1PXD7
Length = 1998
Score = 620 (223.3 bits), Expect = 5.1e-59, P = 5.1e-59
Identities = 119/179 (66%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILV LFS+ I+ TILTNC+ M M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPFNPLRKIAIKILVPTLFSMLIMCTILTNCVFMTMS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 185 (70.2 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 45/176 (25%), Positives = 90/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 728 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 787
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 788 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 843
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 844 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 899
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1196 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1256 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>UNIPROTKB|F1LLV9 [details] [associations]
symbol:Scn2a1 "Protein Scn2a1" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 RGD:3632 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
IPI:IPI00949308 Ensembl:ENSRNOT00000066918 ArrayExpress:F1LLV9
Uniprot:F1LLV9
Length = 1949
Score = 619 (223.0 bits), Expect = 6.2e-59, P = 6.2e-59
Identities = 119/179 (66%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 182 (69.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P T S
Sbjct: 681 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 740
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 741 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 796
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 797 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 852
Score = 171 (65.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1141 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1201 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 38 (18.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>ZFIN|ZDB-GENE-000828-1 [details] [associations]
symbol:scn8aa "sodium channel, voltage-gated, type
VIII, alpha a" species:7955 "Danio rerio" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA;IDA;IMP] [GO:0006814 "sodium
ion transport" evidence=IEA;IDA] [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA;IC] [GO:0016020 "membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IMP] [GO:0005887 "integral to plasma
membrane" evidence=IC] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] [GO:0005272 "sodium channel activity"
evidence=IEA] [GO:0034765 "regulation of ion transmembrane
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008345
"larval locomotory behavior" evidence=IMP] [GO:0007638
"mechanosensory behavior" evidence=IMP] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01667 SMART:SM00015 ZFIN:ZDB-GENE-000828-1 GO:GO:0008045
GO:GO:0008345 GO:GO:0005248 eggNOG:COG1226 GO:GO:0007638
HOGENOM:HOG000231755 GO:GO:0001518 GeneTree:ENSGT00560000076721
HOVERGEN:HBG053100 InterPro:IPR024583 Pfam:PF11933 HSSP:P04775
KO:K04840 OrthoDB:EOG40S0DS EMBL:CR376824 EMBL:AF297658
IPI:IPI00493781 RefSeq:NP_571703.1 UniGene:Dr.82518 STRING:Q9DF53
Ensembl:ENSDART00000022042 GeneID:58152 KEGG:dre:58152 CTD:58152
OMA:WIKAKMR NextBio:20892401 Uniprot:Q9DF53
Length = 1949
Score = 619 (223.0 bits), Expect = 6.2e-59, P = 6.2e-59
Identities = 118/179 (65%), Positives = 150/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL+++ PFN RR+AI IL+H +FS+FI+ TILTNC+ M
Sbjct: 93 TFVVLNKGKTIFRFSATPALYMISPFNLARRIAIKILIHSVFSMFIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFESAVK++ARGF ++ FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 153 NPPEWSKQVEYTFTGIYTFESAVKIIARGFCIDGFTFLRDPWNWLDFMVISMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 194 (73.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 48/176 (27%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 693 YKFANTFLIWECGPLWMSIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPQFEH 752
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 753 VLSVGNLVFTGIFTAEMFAKLVA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 808
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 809 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 864
Score = 178 (67.7 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 37/125 (29%), Positives = 75/125 (60%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI- 118
+E +++FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++ G
Sbjct: 1201 LEYADMVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLIANALGYS 1256
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+
Sbjct: 1257 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVN 1316
Query: 179 DSRGK 183
GK
Sbjct: 1317 MFAGK 1321
>UNIPROTKB|Q99250 [details] [associations]
symbol:SCN2A "Sodium channel protein type 2 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0014704 "intercalated disc" evidence=IEA]
[GO:0030315 "T-tubule" evidence=IEA] [GO:0033270 "paranode region
of axon" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006814 "sodium ion transport" evidence=TAS]
[GO:0033268 "node of Ranvier" evidence=ISS] [GO:0042552
"myelination" evidence=ISS] [GO:0030424 "axon" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 Reactome:REACT_111045 GO:GO:0006915
GO:GO:0014704 GO:GO:0005887 GO:GO:0030315 GO:GO:0042552
GO:GO:0033268 Orphanet:1934 GO:GO:0005248 eggNOG:COG1226
DrugBank:DB00555 Orphanet:36387 GO:GO:0001518 HOVERGEN:HBG053100
OrthoDB:EOG4Z36CT InterPro:IPR024583 Pfam:PF11933 EMBL:M94055
EMBL:AF059683 EMBL:AF327246 EMBL:AF327226 EMBL:AF327227
EMBL:AF327228 EMBL:AF327229 EMBL:AF327230 EMBL:AF327231
EMBL:AF327232 EMBL:AF327233 EMBL:AF327234 EMBL:AF327235
EMBL:AF327236 EMBL:AF327237 EMBL:AF327238 EMBL:AF327239
EMBL:AF327240 EMBL:AF327241 EMBL:AF327242 EMBL:AF327243
EMBL:AF327244 EMBL:AF327245 EMBL:AC011303 EMBL:AC013438 EMBL:X65361
EMBL:M91804 EMBL:M55662 IPI:IPI00220666 IPI:IPI00305036 PIR:A46269
PIR:I59194 RefSeq:NP_001035232.1 RefSeq:NP_001035233.1
RefSeq:NP_066287.2 UniGene:Hs.93485 PDB:2KAV PDBsum:2KAV
ProteinModelPortal:Q99250 SMR:Q99250 IntAct:Q99250
MINT:MINT-1388751 STRING:Q99250 PhosphoSite:Q99250 DMDM:25014053
PaxDb:Q99250 PRIDE:Q99250 Ensembl:ENST00000283256
Ensembl:ENST00000357398 Ensembl:ENST00000375427
Ensembl:ENST00000375437 GeneID:6326 KEGG:hsa:6326 UCSC:uc002udc.3
UCSC:uc002ude.3 CTD:6326 GeneCards:GC02P166095 H-InvDB:HIX0029932
HGNC:HGNC:10588 HPA:CAB022567 MIM:182390 MIM:607745 MIM:613721
neXtProt:NX_Q99250 Orphanet:140927 PharmGKB:PA35004
InParanoid:Q99250 KO:K04834 OMA:EDPTARQ BindingDB:Q99250
ChEMBL:CHEMBL4187 ChiTaRS:SCN2A EvolutionaryTrace:Q99250
GenomeRNAi:6326 NextBio:24550 ArrayExpress:Q99250 Bgee:Q99250
CleanEx:HS_SCN2A Genevestigator:Q99250 GermOnline:ENSG00000136531
Uniprot:Q99250
Length = 2005
Score = 619 (223.0 bits), Expect = 6.6e-59, P = 6.6e-59
Identities = 119/179 (66%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNMLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 179 (68.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 44/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P T S
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 170 (64.9 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
Score = 38 (18.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>UNIPROTKB|Q9NY46 [details] [associations]
symbol:SCN3A "Sodium channel protein type 3 subunit alpha"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005248 "voltage-gated sodium channel activity" evidence=NAS]
[GO:0006814 "sodium ion transport" evidence=NAS] [GO:0001518
"voltage-gated sodium channel complex" evidence=NAS]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 GO:GO:0005737 Reactome:REACT_111045
GO:GO:0005248 eggNOG:COG1226 DrugBank:DB00555 GO:GO:0001518
HOVERGEN:HBG053100 InterPro:IPR024583 Pfam:PF11933 EMBL:AJ251507
EMBL:AF225987 EMBL:AF330135 EMBL:AF330118 EMBL:AF330119
EMBL:AF330120 EMBL:AF330121 EMBL:AF330122 EMBL:AF330123
EMBL:AF330124 EMBL:AF330125 EMBL:AF330126 EMBL:AF330127
EMBL:AF330128 EMBL:AF330129 EMBL:AF330130 EMBL:AF330131
EMBL:AF330132 EMBL:AF330133 EMBL:AF330134 EMBL:AC013463
EMBL:AF035685 EMBL:AF035686 EMBL:S69887 EMBL:AB037777 EMBL:AF239921
IPI:IPI00020692 IPI:IPI00218521 IPI:IPI00218522 IPI:IPI00397861
PIR:A54937 RefSeq:NP_001075145.1 RefSeq:NP_001075146.1
RefSeq:NP_008853.3 UniGene:Hs.435274 ProteinModelPortal:Q9NY46
SMR:Q9NY46 STRING:Q9NY46 PhosphoSite:Q9NY46 DMDM:25014054
PaxDb:Q9NY46 PRIDE:Q9NY46 Ensembl:ENST00000283254
Ensembl:ENST00000360093 Ensembl:ENST00000409101 GeneID:6328
KEGG:hsa:6328 UCSC:uc002ucx.3 UCSC:uc002ucy.3 UCSC:uc002ucz.3
CTD:6328 GeneCards:GC02M165908 HGNC:HGNC:10590 HPA:HPA035397
MIM:182391 neXtProt:NX_Q9NY46 PharmGKB:PA35005 KO:K04836
OMA:NGTMDSN BindingDB:Q9NY46 ChEMBL:CHEMBL5163 GenomeRNAi:6328
NextBio:24562 ArrayExpress:Q9NY46 Bgee:Q9NY46 CleanEx:HS_SCN3A
Genevestigator:Q9NY46 GermOnline:ENSG00000153253 Uniprot:Q9NY46
Length = 2000
Score = 618 (222.6 bits), Expect = 8.4e-59, P = 8.4e-59
Identities = 117/179 (65%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVS 208
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 267
Score = 189 (71.6 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P T S
Sbjct: 731 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 791 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLSNVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1195 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1254
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1255 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1310
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1311 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1360
>UNIPROTKB|E1BMH1 [details] [associations]
symbol:SCN2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033270 "paranode region of axon" evidence=IEA]
[GO:0030315 "T-tubule" evidence=IEA] [GO:0014704 "intercalated
disc" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005248 "voltage-gated sodium channel activity" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 GO:GO:0006915 GO:GO:0014704
GO:GO:0007399 GO:GO:0030424 GO:GO:0030315 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 CTD:6326 KO:K04834 OMA:EDPTARQ
EMBL:DAAA02004364 IPI:IPI00924094 RefSeq:NP_001137581.1
UniGene:Bt.60666 ProteinModelPortal:E1BMH1
Ensembl:ENSBTAT00000061380 GeneID:539718 KEGG:bta:539718
NextBio:20878175 Uniprot:E1BMH1
Length = 2006
Score = 618 (222.6 bits), Expect = 8.4e-59, P = 8.4e-59
Identities = 119/179 (66%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 184 (69.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 45/176 (25%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P T S
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 171 (65.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
Score = 38 (18.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>UNIPROTKB|E2R036 [details] [associations]
symbol:SCN2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 CTD:6326 KO:K04834 OMA:EDPTARQ
EMBL:AAEX03017728 RefSeq:XP_535939.2 Ensembl:ENSCAFT00000017733
GeneID:478773 KEGG:cfa:478773 NextBio:20854052 Uniprot:E2R036
Length = 2006
Score = 618 (222.6 bits), Expect = 8.4e-59, P = 8.4e-59
Identities = 119/179 (66%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 181 (68.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 44/176 (25%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P T S
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 171 (65.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1258 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
Score = 38 (18.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>MGI|MGI:98250 [details] [associations]
symbol:Scn4a "sodium channel, voltage-gated, type IV, alpha"
species:10090 "Mus musculus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IC] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IDA] [GO:0005267 "potassium channel activity"
evidence=IEA] [GO:0005272 "sodium channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034765 "regulation of ion transmembrane
transport" evidence=IDA] [GO:0035725 "sodium ion transmembrane
transport" evidence=IEA;IDA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0071805 "potassium ion transmembrane transport"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 MGI:MGI:98250 GO:GO:0005248
eggNOG:COG1226 EMBL:AL604045 HOGENOM:HOG000231755 KO:K04837
GO:GO:0001518 CTD:6329 EMBL:AJ278787 EMBL:BC129805 IPI:IPI00318790
RefSeq:NP_573462.2 UniGene:Mm.432528 HSSP:P04775
ProteinModelPortal:Q9ER60 SMR:Q9ER60 STRING:Q9ER60
PhosphoSite:Q9ER60 PaxDb:Q9ER60 PRIDE:Q9ER60 GeneID:110880
KEGG:mmu:110880 UCSC:uc007lyu.1 InParanoid:B1ARK0 NextBio:364857
Genevestigator:Q9ER60 Uniprot:Q9ER60
Length = 1841
Score = 617 (222.3 bits), Expect = 9.2e-59, P = 9.2e-59
Identities = 117/179 (65%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYMLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKDVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 178 (67.7 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 43/162 (26%), Positives = 84/162 (51%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIILLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 171 (65.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1014 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1073
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1074 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1129
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1130 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1179
>RGD|3636 [details] [associations]
symbol:Scn4a "sodium channel, voltage-gated, type IV, alpha
subunit" species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA;ISO;TAS] [GO:0006814 "sodium
ion transport" evidence=ISO;TAS] [GO:0034765 "regulation of ion
transmembrane transport" evidence=ISO] [GO:0035725 "sodium ion
transmembrane transport" evidence=ISO] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008052
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015 RGD:3636 GO:GO:0005248
eggNOG:COG1226 HOGENOM:HOG000231755 KO:K04837 GO:GO:0001518
HOVERGEN:HBG053100 CTD:6329 OrthoDB:EOG4B2SW8 EMBL:M26643 EMBL:Y17153
IPI:IPI00339065 PIR:JN0007 RefSeq:NP_037310.1 UniGene:Rn.9700
ProteinModelPortal:P15390 STRING:P15390 PRIDE:P15390 GeneID:25722
KEGG:rno:25722 UCSC:RGD:3636 InParanoid:O70611 BindingDB:P15390
ChEMBL:CHEMBL3509 NextBio:607821 ArrayExpress:P15390
Genevestigator:P15390 GermOnline:ENSRNOG00000012134 Uniprot:P15390
Length = 1840
Score = 616 (221.9 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 117/179 (65%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 175 (66.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/162 (26%), Positives = 83/162 (51%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 171 (65.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
>UNIPROTKB|P15390 [details] [associations]
symbol:Scn4a "Sodium channel protein type 4 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008052
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015 RGD:3636 GO:GO:0005248
eggNOG:COG1226 HOGENOM:HOG000231755 KO:K04837 GO:GO:0001518
HOVERGEN:HBG053100 CTD:6329 OrthoDB:EOG4B2SW8 EMBL:M26643
EMBL:Y17153 IPI:IPI00339065 PIR:JN0007 RefSeq:NP_037310.1
UniGene:Rn.9700 ProteinModelPortal:P15390 STRING:P15390
PRIDE:P15390 GeneID:25722 KEGG:rno:25722 UCSC:RGD:3636
InParanoid:O70611 BindingDB:P15390 ChEMBL:CHEMBL3509 NextBio:607821
ArrayExpress:P15390 Genevestigator:P15390
GermOnline:ENSRNOG00000012134 Uniprot:P15390
Length = 1840
Score = 616 (221.9 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 117/179 (65%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RRVAI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSIVRRVAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYVTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 175 (66.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/162 (26%), Positives = 83/162 (51%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 557 PWVKFKHIIYLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLVFTGIFT 616
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D ++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 617 AEMVLKLIA----MDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFK 672
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 673 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 171 (65.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
>UNIPROTKB|F8VRN5 [details] [associations]
symbol:SCN8A "Sodium channel protein type 8 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR005821
InterPro:IPR008054 Pfam:PF00520 PRINTS:PR01667 GO:GO:0005248
EMBL:AC068987 GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
EMBL:AC013421 EMBL:AC025097 EMBL:AC140060 HGNC:HGNC:10596
ChiTaRS:SCN8A IPI:IPI01025206 ProteinModelPortal:F8VRN5 SMR:F8VRN5
Ensembl:ENST00000550891 UCSC:uc001ryy.2 ArrayExpress:F8VRN5
Bgee:F8VRN5 Uniprot:F8VRN5
Length = 972
Score = 608 (219.1 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 116/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 193 (73.0 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
>UNIPROTKB|F1LNI1 [details] [associations]
symbol:Scn2a1 "Protein Scn2a1" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 RGD:3632 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
IPI:IPI00781886 Ensembl:ENSRNOT00000058929 ArrayExpress:F1LNI1
Uniprot:F1LNI1
Length = 2005
Score = 614 (221.2 bits), Expect = 2.2e-58, P = 2.2e-58
Identities = 118/179 (65%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 182 (69.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P T S
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 171 (65.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
Score = 38 (18.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>UNIPROTKB|E1C6G0 [details] [associations]
symbol:E1C6G0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
EMBL:AADN02056683 EMBL:AADN02056684 EMBL:AADN02056685
IPI:IPI00820559 Ensembl:ENSGALT00000040680 OMA:LNIEATE
ArrayExpress:E1C6G0 Uniprot:E1C6G0
Length = 1817
Score = 613 (220.8 bits), Expect = 2.4e-58, P = 2.4e-58
Identities = 116/182 (63%), Positives = 151/182 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP---LFSLFIITTILTNCILM 57
TF+V++KGK IFRFSAT AL++L PFNPIRR AI +L+H LFS+FI+ TILTNC+ M
Sbjct: 89 TFIVLNKGKSIFRFSATPALYLLGPFNPIRRGAIKVLIHSYCKLFSMFIMITILTNCVFM 148
Query: 58 IMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
+ P ++ E FTGIYTFES +K+++RGF ++ FT+LRD WNWLDF+VI++AY+T
Sbjct: 149 TLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITE 208
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
+DLGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+G
Sbjct: 209 FVDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIG 268
Query: 177 LQ 178
LQ
Sbjct: 269 LQ 270
Score = 183 (69.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 47/174 (27%), Positives = 89/174 (51%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P+ +++ +++ P L I I+ N + M M P E E
Sbjct: 580 YKFAHTFLVWDCCYPWLKLKQFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFEN 639
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A L+ + Y + WN D I++ L+ V +G+ ++
Sbjct: 640 VLTVGNLVFTGIFTAEMVLKLIA----LDPYEYFQQGWNIFDSIIVTLSLVELGLANVQG 695
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA+ G
Sbjct: 696 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVQG 749
Score = 169 (64.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 43/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + +F+ I+ E
Sbjct: 1019 IRKTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIE 1078
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1079 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 1134
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1135 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1184
>UNIPROTKB|E1BQT8 [details] [associations]
symbol:SCN9A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0048266 "behavioral response to
pain" evidence=IEA] InterPro:IPR005821 Pfam:PF00520 GO:GO:0016021
GO:GO:0005216 GeneTree:ENSGT00560000076721 EMBL:AADN02020296
EMBL:AADN02020297 IPI:IPI00583442 Ensembl:ENSGALT00000017930
OMA:VISFAYV Uniprot:E1BQT8
Length = 498
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 119/181 (65%), Positives = 147/181 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT AL++L PFN IRRVAI ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATSALYLLSPFNVIRRVAIKILVHSSTLFSMLIMLTILTNCVFMT 151
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P ++ E FTGIYTFE VK++ARGF ++ FT LRD WNWLDF+VI+ AYVT
Sbjct: 152 WSKLPEWTKNVEYTFTGIYTFEFLVKILARGFCIDDFTCLRDPWNWLDFVVISFAYVTEF 211
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 212 VDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 271
Query: 178 Q 178
Q
Sbjct: 272 Q 272
>UNIPROTKB|F1LTY8 [details] [associations]
symbol:Scn8a "Sodium channel protein type 8 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR005821
InterPro:IPR008054 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR01667 RGD:3638 GO:GO:0005248 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 IPI:IPI00948174
Ensembl:ENSRNOT00000065595 ArrayExpress:F1LTY8 Uniprot:F1LTY8
Length = 1195
Score = 607 (218.7 bits), Expect = 3.9e-58, P = 3.9e-58
Identities = 116/179 (64%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 8 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 67
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 68 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 127
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 128 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 186
Score = 193 (73.0 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 637 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 696
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 697 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 752
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 753 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 808
>UNIPROTKB|F1SGK6 [details] [associations]
symbol:SCN8A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0007517
"muscle organ development" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
OMA:GFICKKT EMBL:CU457457 EMBL:CU914420 Ensembl:ENSSSCT00000000245
Uniprot:F1SGK6
Length = 1984
Score = 611 (220.1 bits), Expect = 4.6e-58, P = 4.6e-58
Identities = 117/179 (65%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 738 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 797
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 798 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 853
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 854 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 909
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 50/169 (29%), Positives = 91/169 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI-ESTEVIFTGIYTFES 80
+R+ I+ H F FII IL + I + T TI E + + T I+ E
Sbjct: 1201 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTITILEYADKVSTYIFILEM 1260
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLRA 134
+K A G L FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1261 LLKWTAYG--LRFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRP 1315
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1316 LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>UNIPROTKB|F1S1Y9 [details] [associations]
symbol:SCN3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005248
"voltage-gated sodium channel activity" evidence=IEA] [GO:0001518
"voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 GO:GO:0005737 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 OMA:NGTMDSN EMBL:CU607096
EMBL:CU571037 Ensembl:ENSSSCT00000017325 Uniprot:F1S1Y9
Length = 2004
Score = 610 (219.8 bits), Expect = 6.0e-58, P = 6.0e-58
Identities = 117/181 (64%), Positives = 149/181 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSSTLFSMLIMCTILTNCVFMT 148
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
+ P ++ E FTGIYTFES +K++ARGF L+ FT+LRD WNWLDF VI +AYVT
Sbjct: 149 LSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLDDFTFLRDPWNWLDFSVIVMAYVTEF 208
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 209 VDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 268
Query: 178 Q 178
Q
Sbjct: 269 Q 269
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1200 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1259
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1260 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1315
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1316 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1365
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 45/180 (25%), Positives = 87/180 (48%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ +W D + ++ + I++ P L I I+ N + M M P T + +
Sbjct: 735 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 794
Query: 70 VIFTGIYTFESAVKVMARGF---ILESFTYLRDAWNW--------LDFIVIALAYVTMGI 118
V+ G F + V +M R F +L + Y+ WNW L I++ +
Sbjct: 795 VLTVGNLVF-TGVCLMKRLFNLLLLMKYFYISVFWNWCFQRHCRSLGLFEISVHSLEKTS 853
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+L N LR F++ ++ T+ ++ +K I+G + ++ NL V+ + +F +FA++G+Q
Sbjct: 854 NLNNAKILRVFKLAKSWPTLNML--IK-IIGNSVGALGNLTLVLAIIVF---IFAVVGMQ 907
>ZFIN|ZDB-GENE-060908-2 [details] [associations]
symbol:scn12aa "sodium channel, voltage gated, type
XII, alpha a" species:7955 "Danio rerio" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA]
[GO:0005248 "voltage-gated sodium channel activity" evidence=IEA]
[GO:0006814 "sodium ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008016 "regulation of heart contraction"
evidence=IGI;IMP] [GO:0003007 "heart morphogenesis"
evidence=IGI;IMP] [GO:0001947 "heart looping" evidence=IGI;IMP]
[GO:0005272 "sodium channel activity" evidence=IEA] [GO:0034765
"regulation of ion transmembrane transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 ZFIN:ZDB-GENE-060908-2
GO:GO:0008016 GO:GO:0001947 GO:GO:0035725 GO:GO:0005248
eggNOG:COG1226 HOGENOM:HOG000231755 GO:GO:0001518
HOVERGEN:HBG053100 InterPro:IPR024583 Pfam:PF11933 EMBL:DQ149507
IPI:IPI00508028 RefSeq:NP_001038387.1 UniGene:Dr.100995
ProteinModelPortal:Q20JQ5 GeneID:795688 KEGG:dre:795688 CTD:795688
NextBio:20932337 Uniprot:Q20JQ5
Length = 1932
Score = 609 (219.4 bits), Expect = 7.1e-58, P = 7.1e-58
Identities = 119/179 (66%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+ IRR++I ILVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYIFSPFHCIRRISIRILVHSLFSLFIMCTILTNCCFMAMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES +K++ARGF E FT+LRD WNWLDF VI +AYVT +D
Sbjct: 150 DPPLWTKYLEYTFTGIYTFESLIKILARGFCTECFTFLRDPWNWLDFSVIVMAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 180 (68.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 46/176 (26%), Positives = 89/176 (50%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+ F+ +W P + ++ +++ P L I I+ N + M + P T S
Sbjct: 676 YEFAQKYLIWTCSPAWLRVKEGLKVMVMDPFLDLAITICIVLNTLFMALEHYPMTDEFNS 735
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K+ F L+ + Y + WN D I++ L+ + +G+ ++
Sbjct: 736 MLSIGNLVFTGIFTAEMVLKI----FALDPYYYFQQGWNIFDGIIVCLSLMELGLSNVEG 791
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 792 LSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 847
Score = 162 (62.1 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 46/170 (27%), Positives = 86/170 (50%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARG 88
+R+ I+ H F FII IL + + IE +V+ E A KV +
Sbjct: 1117 LRKTCYQIVEHSWFETFIILMILLSSGALAFEDI-YIEQRKVVKV---VLEYADKVFSYI 1172
Query: 89 FILESFT---------YLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
F+LE F Y + W WLDF+++ ++ +++ G D G + +LRT R LR
Sbjct: 1173 FVLEMFLKWIAYGFKKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFGAIKSLRTLRALR 1232
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1233 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1282
>UNIPROTKB|Q15858 [details] [associations]
symbol:SCN9A "Sodium channel protein type 9 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0031402 "sodium ion binding"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0006814 "sodium ion transport" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 Reactome:REACT_111045 GO:GO:0009636
GO:GO:0048266 GO:GO:0006954 GO:GO:0009791 GO:GO:0019228
GO:GO:0005248 GO:GO:0031402 eggNOG:COG1226 DrugBank:DB00281
DrugBank:DB00555 Orphanet:36387 Orphanet:33069 GO:GO:0001518
HOVERGEN:HBG053100 InterPro:IPR024583 Pfam:PF11933 EMBL:AC074101
EMBL:X82835 EMBL:DQ857292 EMBL:AC107082 EMBL:AC108146 EMBL:AY682084
EMBL:AY682085 EMBL:AY682086 EMBL:AJ310882 EMBL:AJ310883
EMBL:AJ310897 EMBL:AJ580918 EMBL:AJ580919 IPI:IPI00154944
IPI:IPI00479414 IPI:IPI00745570 PIR:S54771 RefSeq:NP_002968.1
UniGene:Hs.439145 ProteinModelPortal:Q15858 SMR:Q15858
STRING:Q15858 TCDB:1.A.1.10.5 PhosphoSite:Q15858 DMDM:55976302
PaxDb:Q15858 PRIDE:Q15858 Ensembl:ENST00000409435
Ensembl:ENST00000409672 Ensembl:ENST00000454569 GeneID:6335
KEGG:hsa:6335 CTD:6335 GeneCards:GC02M167051 HGNC:HGNC:10597
HPA:CAB013679 MIM:133020 MIM:167400 MIM:243000 MIM:603415
MIM:613863 neXtProt:NX_Q15858 Orphanet:88642 Orphanet:1956
Orphanet:46348 Orphanet:90026 PharmGKB:PA35010 KO:K04841
BindingDB:Q15858 ChEMBL:CHEMBL4296 GenomeRNAi:6335 NextBio:24600
ArrayExpress:Q15858 Bgee:Q15858 CleanEx:HS_SCN9A
Genevestigator:Q15858 GermOnline:ENSG00000169432 Uniprot:Q15858
Length = 1988
Score = 609 (219.4 bits), Expect = 7.5e-58, P = 7.5e-58
Identities = 116/179 (64%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMN 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 185 (70.2 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1181 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1240
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 1241 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1296
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1297 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1346
Score = 178 (67.7 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 45/176 (25%), Positives = 89/176 (50%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E +
Sbjct: 715 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 774
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 775 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 830
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 831 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 886
>RGD|3632 [details] [associations]
symbol:Scn2a1 "sodium channel, voltage-gated, type II, alpha 1"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IDA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IC;ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006814 "sodium ion transport" evidence=ISO;IDA]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0007399 "nervous
system development" evidence=ISO] [GO:0014704 "intercalated disc"
evidence=ISO] [GO:0016020 "membrane" evidence=ISO] [GO:0019228
"regulation of action potential in neuron" evidence=IDA;TAS]
[GO:0030315 "T-tubule" evidence=ISO] [GO:0030424 "axon" evidence=ISO]
[GO:0031402 "sodium ion binding" evidence=IDA] [GO:0033268 "node of
Ranvier" evidence=IDA] [GO:0033270 "paranode region of axon"
evidence=ISO] [GO:0034765 "regulation of ion transmembrane transport"
evidence=ISO] [GO:0035725 "sodium ion transmembrane transport"
evidence=ISO] [GO:0042552 "myelination" evidence=IEP] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043194 "axon initial segment"
evidence=IDA] [GO:0043522 "leucine zipper domain binding"
evidence=IPI] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 RGD:3632 GO:GO:0042552
GO:GO:0043194 GO:GO:0033268 GO:GO:0005248 GO:GO:0031402
eggNOG:COG1226 HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
InterPro:IPR024583 Pfam:PF11933 KO:K04834 EMBL:X03639 IPI:IPI00781886
RefSeq:NP_036779.1 UniGene:Rn.89192 PDB:1BYY PDB:2KXW PDBsum:1BYY
PDBsum:2KXW ProteinModelPortal:P04775 DIP:DIP-57088N IntAct:P04775
STRING:P04775 PhosphoSite:P04775 PRIDE:P04775 GeneID:24766
KEGG:rno:24766 UCSC:RGD:3632 CTD:110876 InParanoid:P04775
BindingDB:P04775 ChEMBL:CHEMBL3399 EvolutionaryTrace:P04775
NextBio:604325 ArrayExpress:P04775 Genevestigator:P04775
GermOnline:ENSRNOG00000005018 Uniprot:P04775
Length = 2005
Score = 609 (219.4 bits), Expect = 7.6e-58, P = 7.6e-58
Identities = 117/179 (65%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LR+ WNWLDF VI AYVT ++
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRNPWNWLDFTVITFAYVTEFVN 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 182 (69.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P T S
Sbjct: 730 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 789
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 790 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 845
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 846 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 901
Score = 171 (65.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1197 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1257 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
Score = 38 (18.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>UNIPROTKB|F1LR08 [details] [associations]
symbol:Scn8a "Sodium channel protein type 8 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
RGD:3638 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 IPI:IPI00949209
Ensembl:ENSRNOT00000067934 ArrayExpress:F1LR08 Uniprot:F1LR08
Length = 1647
Score = 607 (218.7 bits), Expect = 8.7e-58, P = 8.7e-58
Identities = 116/179 (64%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 8 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 67
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 68 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 127
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 128 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 186
Score = 193 (73.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 391 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 450
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 451 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 506
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 507 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 562
Score = 180 (68.4 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 854 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 913
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 914 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 969
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 970 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1019
>UNIPROTKB|E9PSN8 [details] [associations]
symbol:Scn8a "Sodium channel protein type 8 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
RGD:3638 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 IPI:IPI00948993
Ensembl:ENSRNOT00000066577 ArrayExpress:E9PSN8 Uniprot:E9PSN8
Length = 1977
Score = 608 (219.1 bits), Expect = 9.5e-58, P = 9.5e-58
Identities = 116/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 95 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 155 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 721 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 780
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 781 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 836
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 837 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 892
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1184 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1243
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1244 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1299
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1300 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1349
>MGI|MGI:103169 [details] [associations]
symbol:Scn8a "sodium channel, voltage-gated, type VIII,
alpha" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=ISO;IC] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=ISO;NAS] [GO:0005272 "sodium channel activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006814
"sodium ion transport" evidence=ISO;NAS] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009636
"response to toxic substance" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=ISO] [GO:0030018 "Z disc" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0031402 "sodium ion binding"
evidence=ISO] [GO:0033268 "node of Ranvier" evidence=ISO;IDA]
[GO:0034706 "sodium channel complex" evidence=IPI] [GO:0034765
"regulation of ion transmembrane transport" evidence=NAS]
[GO:0035725 "sodium ion transmembrane transport"
evidence=IEA;ISO;NAS] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043194 "axon initial segment" evidence=ISO]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0055085
"transmembrane transport" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
MGI:MGI:103169 GO:GO:0005524 GO:GO:0030018 GO:GO:0009636
GO:GO:0043025 GO:GO:0030425 GO:GO:0007517 GO:GO:0007605
GO:GO:0050905 GO:GO:0033268 GO:GO:0007628 GO:GO:0005248
eggNOG:COG1226 HOGENOM:HOG000231755 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 CTD:6334 KO:K04840
OrthoDB:EOG40S0DS ChiTaRS:SCN8A EMBL:AF049617 EMBL:U26707
EMBL:AK158609 EMBL:U59964 EMBL:U59963 EMBL:U23158 IPI:IPI00337974
IPI:IPI00337975 IPI:IPI00337976 IPI:IPI00337977 IPI:IPI00337978
RefSeq:NP_001070967.1 RefSeq:NP_035453.2 UniGene:Mm.385012
ProteinModelPortal:Q9WTU3 SMR:Q9WTU3 STRING:Q9WTU3
PhosphoSite:Q9WTU3 PaxDb:Q9WTU3 PRIDE:Q9WTU3 GeneID:20273
KEGG:mmu:20273 UCSC:uc007xsh.1 HOVERGEN:HBG091796 BindingDB:Q9WTU3
ChEMBL:CHEMBL1914275 NextBio:297955 CleanEx:MM_SCN8A
Genevestigator:Q9WTU3 GermOnline:ENSMUSG00000023033 Uniprot:Q9WTU3
Length = 1978
Score = 608 (219.1 bits), Expect = 9.5e-58, P = 9.5e-58
Identities = 116/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 199 (75.1 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 48/176 (27%), Positives = 94/176 (53%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>RGD|3638 [details] [associations]
symbol:Scn8a "sodium channel, voltage gated, type VIII, alpha
subunit" species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IDA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IC;ISO;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0006814
"sodium ion transport" evidence=IDA] [GO:0007422 "peripheral nervous
system development" evidence=IEP] [GO:0007517 "muscle organ
development" evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0007626 "locomotory behavior" evidence=ISO]
[GO:0007628 "adult walking behavior" evidence=ISO] [GO:0008344 "adult
locomotory behavior" evidence=ISO] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0019228
"regulation of action potential in neuron" evidence=IMP;IDA]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0031402 "sodium ion binding" evidence=IDA]
[GO:0033268 "node of Ranvier" evidence=ISO;IDA] [GO:0034706 "sodium
channel complex" evidence=ISO] [GO:0042552 "myelination"
evidence=IEP] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043194 "axon initial segment" evidence=IDA] [GO:0050905
"neuromuscular process" evidence=ISO] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015 RGD:3638
GO:GO:0005524 GO:GO:0007422 GO:GO:0042552 GO:GO:0043194 GO:GO:0033268
GO:GO:0005248 GO:GO:0031402 eggNOG:COG1226 HOGENOM:HOG000231755
GO:GO:0001518 HOVERGEN:HBG053100 InterPro:IPR024583 Pfam:PF11933
HSSP:P04775 CTD:6334 KO:K04840 EMBL:AF049239 EMBL:AF049240
IPI:IPI00213193 IPI:IPI00948993 RefSeq:NP_062139.2 UniGene:Rn.91216
ProteinModelPortal:O88420 STRING:O88420 PhosphoSite:O88420
PRIDE:O88420 GeneID:29710 KEGG:rno:29710 UCSC:RGD:3638
BindingDB:O88420 ChEMBL:CHEMBL2752 NextBio:610139 ArrayExpress:O88420
Genevestigator:O88420 Uniprot:O88420
Length = 1978
Score = 608 (219.1 bits), Expect = 9.5e-58, P = 9.5e-58
Identities = 116/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 722 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 781
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 782 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 837
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 838 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 893
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1185 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1244
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1245 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1300
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1301 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1350
>MGI|MGI:107636 [details] [associations]
symbol:Scn9a "sodium channel, voltage-gated, type IX, alpha"
species:10090 "Mus musculus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=ISO] [GO:0005272 "sodium channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006814 "sodium ion transport" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IMP] [GO:0009636
"response to toxic substance" evidence=IDA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=ISO] [GO:0031402 "sodium ion binding" evidence=ISO]
[GO:0034220 "ion transmembrane transport" evidence=IEA] [GO:0034765
"regulation of ion transmembrane transport" evidence=IEA]
[GO:0035725 "sodium ion transmembrane transport" evidence=IEA;ISO]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0055085
"transmembrane transport" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096
SMART:SM00015 MGI:MGI:107636 GO:GO:0009636 GO:GO:0048266
GO:GO:0006954 GO:GO:0009791 GO:GO:0019228 GO:GO:0035725
GO:GO:0005248 GO:GO:0031402 eggNOG:COG1226 HOGENOM:HOG000231755
GO:GO:0001518 GeneTree:ENSGT00560000076721 HOVERGEN:HBG053100
InterPro:IPR024583 Pfam:PF11933 EMBL:AL928623 EMBL:AL928726
EMBL:L42338 EMBL:AK220540 IPI:IPI00356287 UniGene:Mm.440889
ProteinModelPortal:Q62205 SMR:Q62205 STRING:Q62205
PhosphoSite:Q62205 PaxDb:Q62205 PRIDE:Q62205
Ensembl:ENSMUST00000100064 Ensembl:ENSMUST00000164384
UCSC:uc008jxe.2 InParanoid:Q62205 OMA:LMNVSQN OrthoDB:EOG4T782C
Bgee:Q62205 CleanEx:MM_SCN9A Genevestigator:Q62205
GermOnline:ENSMUSG00000075316 Uniprot:Q62205
Length = 1984
Score = 608 (219.1 bits), Expect = 9.6e-58, P = 9.6e-58
Identities = 115/179 (64%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPDWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 185 (70.2 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
Score = 182 (69.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 48/176 (27%), Positives = 90/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ T +W P+ ++ +I++ P L I I+ N + M M P T E
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 773
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 774 VLAVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
>UNIPROTKB|E9PF08 [details] [associations]
symbol:SCN9A "Sodium channel protein type 9 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 SMART:SM00015
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583
Pfam:PF11933 EMBL:AC074101 EMBL:AC107082 EMBL:AC108146
IPI:IPI00479414 HGNC:HGNC:10597 OMA:LMNVSQN
ProteinModelPortal:E9PF08 SMR:E9PF08 Ensembl:ENST00000375387
ArrayExpress:E9PF08 Bgee:E9PF08 Uniprot:E9PF08
Length = 1989
Score = 608 (219.1 bits), Expect = 9.6e-58, P = 9.6e-58
Identities = 118/180 (65%), Positives = 149/180 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-LFSLFIITTILTNCILMIM 59
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSTLFSMLIMCTILTNCIFMTM 146
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AYVT +
Sbjct: 147 NNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYVTEFV 206
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 DLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 185 (70.2 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1182 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 1242 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1297
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1298 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1347
Score = 178 (67.7 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 45/176 (25%), Positives = 89/176 (50%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E +
Sbjct: 716 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 775
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 776 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
>UNIPROTKB|F1LMT6 [details] [associations]
symbol:Scn8a "Sodium channel protein type 8 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
RGD:3638 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 IPI:IPI00569944 PRIDE:F1LMT6
Ensembl:ENSRNOT00000051270 ArrayExpress:F1LMT6 Uniprot:F1LMT6
Length = 1852
Score = 607 (218.7 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 116/179 (64%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 8 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 67
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 68 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 127
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 128 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 186
Score = 193 (73.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 637 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 696
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 697 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 752
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 753 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 808
>UNIPROTKB|F1LMH2 [details] [associations]
symbol:Scn8a "Sodium channel protein type 8 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0050905 "neuromuscular
process" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008054 InterPro:IPR010526
Pfam:PF00520 Pfam:PF00612 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015 RGD:3638 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 IPI:IPI01016360
Ensembl:ENSRNOT00000008160 ArrayExpress:F1LMH2 Uniprot:F1LMH2
Length = 1903
Score = 607 (218.7 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 116/179 (64%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 8 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 67
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 68 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 127
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 128 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 186
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 647 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 706
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 707 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 762
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 763 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 818
Score = 180 (68.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1110 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1169
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1170 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1225
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1226 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1275
>UNIPROTKB|H9KZD1 [details] [associations]
symbol:SCN8A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0007628
"adult walking behavior" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 OMA:GFICKKT EMBL:AADN02072429
EMBL:AADN02072428 Ensembl:ENSGALT00000009776 Uniprot:H9KZD1
Length = 1992
Score = 607 (218.7 bits), Expect = 1.2e-57, P = 1.2e-57
Identities = 116/179 (64%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AYVT +D
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 188 (71.2 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 46/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 736 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 795
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 796 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 851
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 852 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 907
Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1199 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1258
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1259 MLLKWCAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1314
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>UNIPROTKB|F1LNF5 [details] [associations]
symbol:Scn5a "Sodium channel protein type 5 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 RGD:3637 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
GeneTree:ENSGT00650000092939 IPI:IPI00948167
Ensembl:ENSRNOT00000066932 ArrayExpress:F1LNF5 Uniprot:F1LNF5
Length = 2020
Score = 607 (218.7 bits), Expect = 1.3e-57, P = 1.3e-57
Identities = 117/179 (65%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENIK 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 194 (73.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1197 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1256
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1257 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1312
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1313 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1362
>UNIPROTKB|J3QQZ1 [details] [associations]
symbol:SCN4A "Sodium channel protein type 4 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008052
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 EMBL:AC127029 GO:GO:0001518 HGNC:HGNC:10591
ProteinModelPortal:J3QQZ1 Ensembl:ENST00000578147 Uniprot:J3QQZ1
Length = 1836
Score = 606 (218.4 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 115/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 177 (67.4 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 44/162 (27%), Positives = 84/162 (51%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 171 (65.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>UNIPROTKB|P35499 [details] [associations]
symbol:SCN4A "Sodium channel protein type 4 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0006814 "sodium ion transport"
evidence=TAS] [GO:0006936 "muscle contraction" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR008052 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015
Reactome:REACT_111045 GO:GO:0005887 Orphanet:98913 GO:GO:0006936
GO:GO:0005248 eggNOG:COG1226 Orphanet:681 EMBL:AC127029
DrugBank:DB00555 HOGENOM:HOG000231755 KO:K04837 GO:GO:0001518
HOVERGEN:HBG053100 EMBL:M81758 EMBL:L04236 EMBL:L04216 EMBL:L04217
EMBL:L04218 EMBL:L04219 EMBL:L04220 EMBL:L04221 EMBL:L04222
EMBL:L04223 EMBL:L04224 EMBL:L04225 EMBL:L04226 EMBL:L04227
EMBL:L04228 EMBL:L04229 EMBL:L04230 EMBL:L04231 EMBL:L04232
EMBL:L04233 EMBL:L04234 EMBL:L04235 EMBL:AY212253 EMBL:L01983
EMBL:L01962 EMBL:L01963 EMBL:L01964 EMBL:L01965 EMBL:L01966
EMBL:L01967 EMBL:L01968 EMBL:L01969 EMBL:L01970 EMBL:L01971
EMBL:L01972 EMBL:L01973 EMBL:L01974 EMBL:L01975 EMBL:L01976
EMBL:L01977 EMBL:L01978 EMBL:L01979 EMBL:L01980 EMBL:L01981
EMBL:L01982 EMBL:S82622 IPI:IPI00292393 PIR:I51964 PIR:I54323
PIR:I64893 PIR:JS0648 RefSeq:NP_000325.4 UniGene:Hs.46038
ProteinModelPortal:P35499 SMR:P35499 STRING:P35499 TCDB:1.A.1.10.4
PhosphoSite:P35499 DMDM:292495096 PaxDb:P35499 PRIDE:P35499
DNASU:6329 Ensembl:ENST00000435607 GeneID:6329 KEGG:hsa:6329
UCSC:uc002jds.1 CTD:6329 GeneCards:GC17M062015 H-InvDB:HIX0039131
HGNC:HGNC:10591 MIM:168300 MIM:170500 MIM:603967 MIM:608390
MIM:613345 MIM:614198 neXtProt:NX_P35499 Orphanet:99736
Orphanet:682 Orphanet:99734 Orphanet:99735 Orphanet:684
PharmGKB:PA35006 InParanoid:P35499 OMA:IIRRGAI OrthoDB:EOG4B2SW8
ChEMBL:CHEMBL2072 GenomeRNAi:6329 NextBio:24570 ArrayExpress:P35499
Bgee:P35499 CleanEx:HS_SCN4A Genevestigator:P35499
GermOnline:ENSG00000007314 Uniprot:P35499
Length = 1836
Score = 606 (218.4 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 115/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYLLSPFSVVRRGAIKVLIHALFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPPWSKNVEYTFTGIYTFESLIKILARGFCVDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 177 (67.4 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 44/162 (27%), Positives = 84/162 (51%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P+ + + I++ P L I I+ N + M M P E + ++FTGI+T
Sbjct: 563 PWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLVFTGIFT 622
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR+LR K
Sbjct: 623 AEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFK 678
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 679 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 720
Score = 171 (65.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>UNIPROTKB|F1Q384 [details] [associations]
symbol:SCN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 OMA:NGTMDSN EMBL:AAEX03017727
Ensembl:ENSCAFT00000017434 Uniprot:F1Q384
Length = 1980
Score = 606 (218.4 bits), Expect = 1.6e-57, P = 1.6e-57
Identities = 119/185 (64%), Positives = 150/185 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH-----P-LFSLFIITTILTNC 54
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH P LFS+ I+ TILTNC
Sbjct: 88 TFIVLNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSYPFHPTLFSMLIMCTILTNC 147
Query: 55 ILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
+ M + P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AY
Sbjct: 148 VFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAY 207
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
VT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFA
Sbjct: 208 VTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFA 267
Query: 174 LMGLQ 178
L+GLQ
Sbjct: 268 LIGLQ 272
Score = 188 (71.2 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P T S
Sbjct: 719 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 778
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 779 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 834
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 835 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 890
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1183 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1242
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1243 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1298
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1299 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1348
>UNIPROTKB|E2R0F0 [details] [associations]
symbol:SCN8A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0007517
"muscle organ development" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
OMA:GFICKKT EMBL:AAEX03015032 Ensembl:ENSCAFT00000012237
Uniprot:E2R0F0
Length = 1980
Score = 605 (218.0 bits), Expect = 2.0e-57, P = 2.0e-57
Identities = 115/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 199 (75.1 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 48/176 (27%), Positives = 94/176 (53%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>RGD|69368 [details] [associations]
symbol:Scn9a "sodium channel, voltage-gated, type IX, alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA;IDA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA;IDA] [GO:0006954 "inflammatory
response" evidence=IEA;ISO] [GO:0009636 "response to toxic
substance" evidence=IEA;ISO] [GO:0009791 "post-embryonic
development" evidence=IEA;ISO] [GO:0019228 "regulation of action
potential in neuron" evidence=IDA] [GO:0031402 "sodium ion binding"
evidence=IDA] [GO:0043179 "rhythmic excitation" evidence=NAS]
[GO:0048266 "behavioral response to pain" evidence=IEA;ISO]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 RGD:69368 GO:GO:0009636 GO:GO:0048266
GO:GO:0006954 GO:GO:0009791 GO:GO:0019228 GO:GO:0005248
GO:GO:0031402 eggNOG:COG1226 GO:GO:0043179 HOGENOM:HOG000231755
GO:GO:0001518 GeneTree:ENSGT00560000076721 HOVERGEN:HBG053100
InterPro:IPR024583 Pfam:PF11933 CTD:6335 KO:K04841 OrthoDB:EOG4T782C
EMBL:U79568 EMBL:AF000368 IPI:IPI00480827 RefSeq:NP_579823.1
UniGene:Rn.88082 ProteinModelPortal:O08562 STRING:O08562
PhosphoSite:O08562 PRIDE:O08562 Ensembl:ENSRNOT00000065126
GeneID:78956 KEGG:rno:78956 UCSC:RGD:69368 InParanoid:O08562
BindingDB:O08562 ChEMBL:CHEMBL3312 NextBio:614368
ArrayExpress:O08562 Genevestigator:O08562
GermOnline:ENSRNOG00000006639 Uniprot:O08562
Length = 1984
Score = 605 (218.0 bits), Expect = 2.0e-57, P = 2.0e-57
Identities = 114/179 (63%), Positives = 149/179 (83%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M +
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTLS 146
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF+VI AY+T ++
Sbjct: 147 NPPEWTKNVEYTFTGIYTFESLIKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVN 206
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 265
Score = 186 (70.5 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 46/176 (26%), Positives = 91/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P E +
Sbjct: 714 YRFAHTFLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 773
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+IFTGI+ E +K++A ++ + Y + WN D +++ L+ + + + D+
Sbjct: 774 VLAVGNLIFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLIELFLADVEG 829
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 830 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 885
Score = 185 (70.2 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1179 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1238
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 1239 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1294
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1295 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1344
>UNIPROTKB|E2RR09 [details] [associations]
symbol:SCN4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248 KO:K04837
GO:GO:0001518 GeneTree:ENSGT00560000076721 CTD:6329 OMA:IIRRGAI
EMBL:AAEX03006360 EMBL:AAEX03006359 RefSeq:XP_853396.1
Ensembl:ENSCAFT00000019738 GeneID:610754 KEGG:cfa:610754
Uniprot:E2RR09
Length = 1837
Score = 604 (217.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 115/179 (64%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ IFRFSAT AL++L PF+ IRR AI +L+H LFS+FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGRAIFRFSATPALYMLSPFSIIRRGAIKVLIHSLFSMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 NPPSWSKHVEYTFTGIYTFESLIKMLARGFCIDDFTFLRDPWNWLDFSVITMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 179 (68.1 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 45/168 (26%), Positives = 86/168 (51%)
Query: 20 LW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VI 71
+W P+ + + I++ P L I I+ N + M M P E + ++
Sbjct: 551 IWNCCTPWMKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLTVGNLV 610
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFR 130
FTGI+T E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR
Sbjct: 611 FTGIFTAEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFR 666
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 667 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 171 (65.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 44/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT I+ E
Sbjct: 1020 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRSILEYADKVFTYIFIME 1079
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1080 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1135
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1136 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1185
>ZFIN|ZDB-GENE-060908-3 [details] [associations]
symbol:scn12ab "sodium channel, voltage gated, type
XII, alpha b" species:7955 "Danio rerio" [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA;IDA] [GO:0006814 "sodium ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA;IC] [GO:0001947 "heart looping" evidence=IGI;IMP]
[GO:0003007 "heart morphogenesis" evidence=IGI;IMP] [GO:0008016
"regulation of heart contraction" evidence=IGI;IMP] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA] [GO:0005272
"sodium channel activity" evidence=IEA] [GO:0034765 "regulation of
ion transmembrane transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 ZFIN:ZDB-GENE-060908-3 GO:GO:0008016
GO:GO:0001947 GO:GO:0005248 GO:GO:0001518 HOVERGEN:HBG053100
InterPro:IPR024583 Pfam:PF11933 EMBL:DQ149508 IPI:IPI00485662
RefSeq:NP_001038588.1 UniGene:Dr.110026 ProteinModelPortal:Q20JQ4
STRING:Q20JQ4 GeneID:566868 KEGG:dre:566868 CTD:566868
NextBio:20888418 Uniprot:Q20JQ4
Length = 1954
Score = 604 (217.7 bits), Expect = 2.5e-57, P = 2.5e-57
Identities = 119/180 (66%), Positives = 146/180 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++ PF+PIRR +I ILVH LFSLFI+ TILTNC M M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYIFSPFHPIRRASIRILVHSLFSLFIMCTILTNCCFMAM- 148
Query: 61 GTPT--IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT +
Sbjct: 149 SEPAQWAKYVEYTFTGIYTFESLIKILARGFCIGPFTFLRDPWNWLDFSVILMAYVTEFV 208
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 209 DLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 45/176 (25%), Positives = 90/176 (51%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VI 71
+W P + ++ +++ P L I I+ N + M + P + ++
Sbjct: 685 VWTCSPRWLKVKEWVKIMVMDPFLDLAITICIVLNTLFMALEHYPMTDEFNRMLSVGNLV 744
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFR 130
FTGI+T E +K++A L+ + Y + WN D ++++L+ + +G+ ++ L+ LR+FR
Sbjct: 745 FTGIFTAEMVLKIIA----LDPYYYFQQGWNIFDSLIVSLSLMELGLSNVEGLSVLRSFR 800
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSD 186
+LR K P L T++ + SV L ++ ++ + +FA++G+Q GK D
Sbjct: 801 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFGKNYD 855
Score = 165 (63.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/170 (27%), Positives = 86/170 (50%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + +E + IFT I+ E
Sbjct: 1137 LRKTCYQIVEHSWFETFIIFMILLSSGALAFEDIYIDQRKVVKVILEYADKIFTYIFILE 1196
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
++K +A GF Y + W WLDF+++ ++ V T+G D + +LRT R LR
Sbjct: 1197 MSLKWIAYGFR----KYFTNYWCWLDFLIVDVSLVSLVANTLGYSDFAAIKSLRTLRALR 1252
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1253 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1302
>UNIPROTKB|K4DIA1 [details] [associations]
symbol:SCN5A "Sodium channel protein type 5 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933 EMBL:AP006241
RefSeq:NP_001153633.1 GeneID:6331 KEGG:hsa:6331 HGNC:HGNC:10593
KO:K04838 Ensembl:ENST00000450102 Ensembl:ENST00000451551
Uniprot:K4DIA1
Length = 1962
Score = 604 (217.7 bits), Expect = 2.5e-57, P = 2.5e-57
Identities = 117/179 (65%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 181 (68.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV------I 71
+W P + I++ +++ P L I I+ N + M + T E E+ +
Sbjct: 696 IWECCPLWMSIKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLV 755
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFR 130
FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR
Sbjct: 756 FTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFR 811
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+LR K P L T++ + SV L ++ ++ + +FA++G+Q GK E D
Sbjct: 812 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFGKNYSELRD 870
Score = 176 (67.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1140 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1200 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
>UNIPROTKB|F1NDB7 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 InterPro:IPR024583
Pfam:PF11933 EMBL:AADN02000270 EMBL:AADN02000271 EMBL:AADN02000272
IPI:IPI00810836 Ensembl:ENSGALT00000009923 ArrayExpress:F1NDB7
Uniprot:F1NDB7
Length = 1977
Score = 604 (217.7 bits), Expect = 2.5e-57, P = 2.5e-57
Identities = 116/179 (64%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L PF+P+RR AI IL+ LFS+FI+ TILTNC+ M
Sbjct: 90 TFVVLNKGKTIFRFSATPALYILSPFHPVRRAAIKILLFTLFSMFIMCTILTNCVFMAQS 149
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ETPSWNKYVEYTFTGIYTFESLIKILARGFCMTEFTFLRDPWNWLDFSVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 188 (71.2 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 48/174 (27%), Positives = 90/174 (51%)
Query: 14 FSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE--- 69
F+ +W PF I++ ++++ P L I I+ N + M + + +
Sbjct: 699 FAVKFLIWDCCPFWLLIKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFDHML 758
Query: 70 ----VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLA 124
++FTGI+T E KV+A L+ + Y + WN D I++ L+ + +G+ +GNL+
Sbjct: 759 YIGNLVFTGIFTAEMIFKVIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLS 814
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 815 VLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 47/170 (27%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC--------ILMIMPGTPT-IESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L T +E + IFT I+ E
Sbjct: 1156 LRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLEYADKIFTYIFVLE 1215
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1216 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALR 1271
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1272 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1321
>UNIPROTKB|E9PHB6 [details] [associations]
symbol:SCN5A "Sodium channel protein type 5 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933 EMBL:AP006241
RefSeq:NP_001153632.1 UniGene:Hs.517898 GeneID:6331 KEGG:hsa:6331
CTD:6331 HGNC:HGNC:10593 KO:K04838 GenomeRNAi:6331 NextBio:24578
IPI:IPI01008809 ProteinModelPortal:E9PHB6 SMR:E9PHB6 PRIDE:E9PHB6
Ensembl:ENST00000455624 UCSC:uc021wvk.1 ArrayExpress:E9PHB6
Bgee:E9PHB6 Uniprot:E9PHB6
Length = 1983
Score = 604 (217.7 bits), Expect = 2.5e-57, P = 2.5e-57
Identities = 117/179 (65%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 181 (68.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV------I 71
+W P + I++ +++ P L I I+ N + M + T E E+ +
Sbjct: 696 IWECCPLWMSIKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLV 755
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFR 130
FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR
Sbjct: 756 FTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFR 811
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+LR K P L T++ + SV L ++ ++ + +FA++G+Q GK E D
Sbjct: 812 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFGKNYSELRD 870
Score = 176 (67.0 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1193 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1252
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1253 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1308
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1309 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1358
>UNIPROTKB|E9PG18 [details] [associations]
symbol:SCN5A "Sodium channel protein type 5 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933 EMBL:AP006241
RefSeq:NP_001092875.1 UniGene:Hs.517898 GeneID:6331 KEGG:hsa:6331
CTD:6331 HGNC:HGNC:10593 KO:K04838 GenomeRNAi:6331 NextBio:24578
IPI:IPI00930507 SMR:E9PG18 Ensembl:ENST00000414099
Ensembl:ENST00000425664 UCSC:uc021wvm.1 Uniprot:E9PG18
Length = 1998
Score = 604 (217.7 bits), Expect = 2.6e-57, P = 2.6e-57
Identities = 117/179 (65%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 181 (68.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV------I 71
+W P + I++ +++ P L I I+ N + M + T E E+ +
Sbjct: 696 IWECCPLWMSIKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLV 755
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFR 130
FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR
Sbjct: 756 FTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFR 811
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+LR K P L T++ + SV L ++ ++ + +FA++G+Q GK E D
Sbjct: 812 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFGKNYSELRD 870
Score = 176 (67.0 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>UNIPROTKB|H9KVD2 [details] [associations]
symbol:SCN5A "Sodium channel protein type 5 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0003231 "cardiac ventricle
development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0014070 "response to organic cyclic compound" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IEA] [GO:0030315
"T-tubule" evidence=IEA] [GO:0086004 "regulation of cardiac muscle
cell contraction" evidence=IEA] [GO:0086063 "voltage-gated sodium
channel activity involved in regulation of SA node cell action
potential" evidence=IEA] [GO:0086091 "regulation of heart rate by
cardiac conduction" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 GO:GO:0014704 GO:GO:0030315
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583
Pfam:PF11933 EMBL:AP006241 RefSeq:NP_001092874.1 UniGene:Hs.517898
GeneID:6331 KEGG:hsa:6331 CTD:6331 HGNC:HGNC:10593 KO:K04838
ProteinModelPortal:H9KVD2 SMR:H9KVD2 PRIDE:H9KVD2
Ensembl:ENST00000413689 OMA:LNGKRNS Bgee:H9KVD2 Uniprot:H9KVD2
Length = 2016
Score = 604 (217.7 bits), Expect = 2.6e-57, P = 2.6e-57
Identities = 117/179 (65%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYVSENIK 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 181 (68.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV------I 71
+W P + I++ +++ P L I I+ N + M + T E E+ +
Sbjct: 696 IWECCPLWMSIKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLV 755
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFR 130
FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR
Sbjct: 756 FTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFR 811
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+LR K P L T++ + SV L ++ ++ + +FA++G+Q GK E D
Sbjct: 812 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFGKNYSELRD 870
Score = 176 (67.0 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>UNIPROTKB|F1MHP0 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0086091 "regulation of heart rate by cardiac
conduction" evidence=IEA] [GO:0086063 "voltage-gated sodium channel
activity involved in regulation of SA node cell action potential"
evidence=IEA] [GO:0086004 "regulation of cardiac muscle cell
contraction" evidence=IEA] [GO:0030315 "T-tubule" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IEA] [GO:0014070 "response
to organic cyclic compound" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0003231 "cardiac ventricle development"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
SMART:SM00015 GO:GO:0014704 GO:GO:0030315 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
GeneTree:ENSGT00650000092939 OMA:LNGKRNS EMBL:DAAA02053650
EMBL:DAAA02053651 EMBL:DAAA02053652 IPI:IPI00710370
Ensembl:ENSBTAT00000012068 Uniprot:F1MHP0
Length = 2022
Score = 604 (217.7 bits), Expect = 2.6e-57, P = 2.6e-57
Identities = 118/179 (65%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL VL PF+PIRRVA+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALHVLSPFHPIRRVAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E IFT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYIFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 195 (73.7 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 52/186 (27%), Positives = 96/186 (51%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 692 RFAQHYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 867
Query: 184 KSDESH 189
S++ H
Sbjct: 868 YSEQRH 873
Score = 167 (63.8 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 44/170 (25%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1199 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1258
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ G ++G + +LRT R LR
Sbjct: 1259 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1314
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1315 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1364
>UNIPROTKB|F8VWM7 [details] [associations]
symbol:SCN8A "Sodium channel protein type 8 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR005821
InterPro:IPR008054 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR01667 GO:GO:0005248 EMBL:AC068987 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 EMBL:AC013421 EMBL:AC025097
EMBL:AC140060 HGNC:HGNC:10596 ChiTaRS:SCN8A IPI:IPI01022747
Ensembl:ENST00000355133 ArrayExpress:F8VWM7 Bgee:F8VWM7
Uniprot:F8VWM7
Length = 1557
Score = 602 (217.0 bits), Expect = 2.6e-57, P = 2.6e-57
Identities = 114/179 (63%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 193 (73.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
>UNIPROTKB|F1N8I1 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 InterPro:IPR024583
Pfam:PF11933 EMBL:AADN02000270 EMBL:AADN02000271 EMBL:AADN02000272
IPI:IPI00812753 Ensembl:ENSGALT00000031281 ArrayExpress:F1N8I1
Uniprot:F1N8I1
Length = 2030
Score = 604 (217.7 bits), Expect = 2.7e-57, P = 2.7e-57
Identities = 116/179 (64%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L PF+P+RR AI IL+ LFS+FI+ TILTNC+ M
Sbjct: 90 TFVVLNKGKTIFRFSATPALYILSPFHPVRRAAIKILLFTLFSMFIMCTILTNCVFMAQS 149
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ETPSWNKYVEYTFTGIYTFESLIKILARGFCMTEFTFLRDPWNWLDFSVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 188 (71.2 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 48/174 (27%), Positives = 90/174 (51%)
Query: 14 FSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE--- 69
F+ +W PF I++ ++++ P L I I+ N + M + + +
Sbjct: 699 FAVKFLIWDCCPFWLLIKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFDHML 758
Query: 70 ----VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLA 124
++FTGI+T E KV+A L+ + Y + WN D I++ L+ + +G+ +GNL+
Sbjct: 759 YIGNLVFTGIFTAEMIFKVIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLS 814
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 815 VLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 172 (65.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 47/170 (27%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC--------ILMIMPGTPT-IESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L T +E + IFT I+ E
Sbjct: 1209 LRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLEYADKIFTYIFVLE 1268
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1269 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALR 1324
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1325 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1374
>UNIPROTKB|F1NDB8 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
PROSITE:PS50096 SMART:SM00015 GO:GO:0014704 GO:GO:0030315
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
EMBL:AADN02000270 EMBL:AADN02000271 EMBL:AADN02000272
IPI:IPI00582339 Ensembl:ENSGALT00000009918 OMA:ECLSMND
ArrayExpress:F1NDB8 Uniprot:F1NDB8
Length = 2032
Score = 604 (217.7 bits), Expect = 2.7e-57, P = 2.7e-57
Identities = 116/179 (64%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV++KGK IFRFSAT AL++L PF+P+RR AI IL+ LFS+FI+ TILTNC+ M
Sbjct: 90 TFVVLNKGKTIFRFSATPALYILSPFHPVRRAAIKILLFTLFSMFIMCTILTNCVFMAQS 149
Query: 61 GTPTIES-TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
TP+ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AY+T +D
Sbjct: 150 ETPSWNKYVEYTFTGIYTFESLIKILARGFCMTEFTFLRDPWNWLDFSVIVMAYITEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 268
Score = 188 (71.2 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 48/174 (27%), Positives = 90/174 (51%)
Query: 14 FSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE--- 69
F+ +W PF I++ ++++ P L I I+ N + M + + +
Sbjct: 699 FAVKFLIWDCCPFWLLIKKFVKFVVMDPFTDLTITLCIVLNTLFMALEHYKMTKEFDHML 758
Query: 70 ----VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLA 124
++FTGI+T E KV+A L+ + Y + WN D I++ L+ + +G+ +GNL+
Sbjct: 759 YIGNLVFTGIFTAEMIFKVIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSSMGNLS 814
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 815 VLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 172 (65.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 47/170 (27%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC--------ILMIMPGTPT-IESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + L T +E + IFT I+ E
Sbjct: 1211 LRKTCYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLEYADKIFTYIFVLE 1270
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1271 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALR 1326
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1327 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1376
>UNIPROTKB|F1RPN2 [details] [associations]
symbol:SCN2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033270 "paranode region of axon" evidence=IEA]
[GO:0030315 "T-tubule" evidence=IEA] [GO:0014704 "intercalated
disc" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005248 "voltage-gated sodium channel activity" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 GO:GO:0006915 GO:GO:0014704
GO:GO:0007399 GO:GO:0030424 GO:GO:0030315 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 OMA:EDPTARQ EMBL:CU466950
EMBL:CU607096 Ensembl:ENSSSCT00000017318 Uniprot:F1RPN2
Length = 2006
Score = 603 (217.3 bits), Expect = 3.3e-57, P = 3.3e-57
Identities = 117/179 (65%), Positives = 146/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK I RFSAT AL++L PFNPIR++AI IL LF++ I+ TILTNC+ M M
Sbjct: 90 TFIVLNKGKAISRFSATPALYILTPFNPIRKLAIKILSSTLFNVLIMCTILTNCVFMTMS 149
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +D
Sbjct: 150 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVD 209
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 268
Score = 181 (68.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 44/176 (25%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ + +++ P L I I+ N + M M P T S
Sbjct: 731 YKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 790
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++++L+ + +G+ ++
Sbjct: 791 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGLIVSLSLMELGLANVEG 846
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 847 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 902
Score = 170 (64.9 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1198 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1258 MLLKWIAYGFQV----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
Score = 38 (18.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>UNIPROTKB|F1MMU9 [details] [associations]
symbol:SCN8A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0007517
"muscle organ development" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
CTD:6334 KO:K04840 OMA:GFICKKT EMBL:DAAA02012901 IPI:IPI00706980
RefSeq:NP_001180031.1 UniGene:Bt.41157 ProteinModelPortal:F1MMU9
PRIDE:F1MMU9 Ensembl:ENSBTAT00000061543 GeneID:537277
KEGG:bta:537277 NextBio:20877100 Uniprot:F1MMU9
Length = 1980
Score = 602 (217.0 bits), Expect = 4.1e-57, P = 4.1e-57
Identities = 114/179 (63%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>UNIPROTKB|Q9UQD0 [details] [associations]
symbol:SCN8A "Sodium channel protein type 8 subunit alpha"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IDA;NAS] [GO:0006814 "sodium ion
transport" evidence=NAS] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IC] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0043194 "axon initial
segment" evidence=ISS] [GO:0030018 "Z disc" evidence=ISS]
[GO:0033268 "node of Ranvier" evidence=ISS] [GO:0042552
"myelination" evidence=ISS] [GO:0007422 "peripheral nervous system
development" evidence=ISS] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008054 InterPro:IPR010526
Pfam:PF00520 Pfam:PF00612 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0030018 GO:GO:0007422
GO:GO:0016023 GO:GO:0042552 GO:GO:0043194 GO:GO:0033268
Orphanet:1934 GO:GO:0005248 eggNOG:COG1226 DrugBank:DB00555
EMBL:AC068987 HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
InterPro:IPR024583 Pfam:PF11933 EMBL:AF050736 EMBL:AF050711
EMBL:AF050712 EMBL:AF050713 EMBL:AF050714 EMBL:AF050715
EMBL:AF050716 EMBL:AF050717 EMBL:AF050718 EMBL:AF050719
EMBL:AF050720 EMBL:AF050721 EMBL:AF050722 EMBL:AF050723
EMBL:AF050724 EMBL:AF050725 EMBL:AF050726 EMBL:AF050727
EMBL:AF050728 EMBL:AF050729 EMBL:AF050730 EMBL:AF050731
EMBL:AF050732 EMBL:AF050733 EMBL:AF050734 EMBL:AF050735
EMBL:AF049618 EMBL:FJ611941 EMBL:AB027567 EMBL:AF225988
EMBL:AC013421 EMBL:AC025097 EMBL:AC140060 IPI:IPI00183041
IPI:IPI00337743 IPI:IPI00337744 IPI:IPI00337745 IPI:IPI00954952
RefSeq:NP_001171455.1 RefSeq:NP_055006.1 UniGene:Hs.436550
UniGene:Hs.710638 ProteinModelPortal:Q9UQD0 SMR:Q9UQD0
IntAct:Q9UQD0 STRING:Q9UQD0 TCDB:1.A.1.10.8 PhosphoSite:Q9UQD0
DMDM:34098756 PaxDb:Q9UQD0 PRIDE:Q9UQD0 Ensembl:ENST00000354534
Ensembl:ENST00000545061 GeneID:6334 KEGG:hsa:6334 UCSC:uc001ryw.3
UCSC:uc010snl.2 CTD:6334 GeneCards:GC12P051987 HGNC:HGNC:10596
HPA:CAB022169 MIM:600702 MIM:614306 MIM:614558 neXtProt:NX_Q9UQD0
PharmGKB:PA35009 KO:K04840 OMA:GFICKKT OrthoDB:EOG40S0DS
BindingDB:Q9UQD0 ChEMBL:CHEMBL5202 ChiTaRS:SCN8A GenomeRNAi:6334
NextBio:24596 ArrayExpress:Q9UQD0 Bgee:Q9UQD0 CleanEx:HS_SCN8A
Genevestigator:Q9UQD0 GermOnline:ENSG00000196876 Uniprot:Q9UQD0
Length = 1980
Score = 602 (217.0 bits), Expect = 4.1e-57, P = 4.1e-57
Identities = 114/179 (63%), Positives = 148/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H +FS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSVFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPDWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 724 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 783
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 784 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 839
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 840 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 895
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1187 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1246
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1247 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1302
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1303 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1352
>UNIPROTKB|E1B9G2 [details] [associations]
symbol:SCN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005248
"voltage-gated sodium channel activity" evidence=IEA] [GO:0001518
"voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 GO:GO:0005737 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 OMA:NGTMDSN EMBL:DAAA02004364
IPI:IPI00706708 Ensembl:ENSBTAT00000025829 Uniprot:E1B9G2
Length = 2007
Score = 602 (217.0 bits), Expect = 4.2e-57, P = 4.2e-57
Identities = 119/185 (64%), Positives = 150/185 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--P----LFSLFIITTILTNC 54
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH P LFS+ I+ TILTNC
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSYPFYSTLFSMLIMCTILTNC 148
Query: 55 ILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
+ M + P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AY
Sbjct: 149 VFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAY 208
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
VT ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFA
Sbjct: 209 VTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFA 268
Query: 174 LMGLQ 178
L+GLQ
Sbjct: 269 LIGLQ 273
Score = 187 (70.9 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P T S
Sbjct: 738 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 797
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 798 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 853
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 854 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 909
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1202 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1261
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1262 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1317
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1318 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1367
>UNIPROTKB|E1BHR8 [details] [associations]
symbol:SCN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721 CTD:6323
KO:K04833 OMA:TVFEFDW InterPro:IPR024583 Pfam:PF11933 OMA:LMNVSQN
EMBL:DAAA02004364 IPI:IPI00696500 IPI:IPI00924094 IPI:IPI01002177
UniGene:Bt.105983 UniGene:Bt.61065 Ensembl:ENSBTAT00000024655
KEGG:bta:529590 NextBio:20875059 Uniprot:E1BHR8
Length = 2007
Score = 602 (217.0 bits), Expect = 4.2e-57, P = 4.2e-57
Identities = 119/185 (64%), Positives = 150/185 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--P----LFSLFIITTILTNC 54
TF+V++KGK IFRFSAT AL++L P NPIR++AI ILVH P LFS+ I+ TILTNC
Sbjct: 89 TFIVLNKGKAIFRFSATSALYILTPLNPIRKIAIKILVHSYPFYSTLFSMLIMCTILTNC 148
Query: 55 ILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
+ M + P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +AY
Sbjct: 149 VFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAY 208
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
VT ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFA
Sbjct: 209 VTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFA 268
Query: 174 LMGLQ 178
L+GLQ
Sbjct: 269 LIGLQ 273
Score = 187 (70.9 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P T S
Sbjct: 738 YRFANMFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 797
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 798 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 853
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 854 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 909
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1202 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1261
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1262 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1317
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1318 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1367
>UNIPROTKB|F1LS56 [details] [associations]
symbol:Scn8a "Sodium channel protein type 8 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008054
InterPro:IPR010526 Pfam:PF00520 Pfam:PF00612 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 PROSITE:PS50096 SMART:SM00015
RGD:3638 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 IPI:IPI00949524
Ensembl:ENSRNOT00000066049 ArrayExpress:F1LS56 Uniprot:F1LS56
Length = 1893
Score = 601 (216.6 bits), Expect = 4.9e-57, P = 4.9e-57
Identities = 114/179 (63%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN IRR+AI IL+H FS+ I+ TILTNC+ M
Sbjct: 8 TFVVLNRGKTLFRFSATPALYILSPFNLIRRIAIKILIHSFFSMIIMCTILTNCVFMTFS 67
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 68 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 127
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 128 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 186
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 637 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPQFEH 696
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + D+
Sbjct: 697 VLAVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLADVEG 752
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 753 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 808
Score = 180 (68.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1100 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1159
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1160 MLLKWTAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1215
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1216 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1265
>UNIPROTKB|H9KZS2 [details] [associations]
symbol:SCN8A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008054 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01667
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 InterPro:IPR024583
Pfam:PF11933 EMBL:AADN02072429 EMBL:AADN02072428
Ensembl:ENSGALT00000017935 Uniprot:H9KZS2
Length = 1981
Score = 601 (216.6 bits), Expect = 5.3e-57, P = 5.3e-57
Identities = 114/179 (63%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TFVV+++GK +FRFSAT AL++L PFN RR+AI IL+H LFS+ I+ TILTNC+ M
Sbjct: 93 TFVVLNRGKTLFRFSATPALYILSPFNLFRRIAIKILIHSLFSMIIMCTILTNCVFMTFS 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES VK++ARGF ++ FT+LRD WNWLDF VI +AY+T ++
Sbjct: 153 NPPEWSKNVEYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYITEFVN 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 271
Score = 188 (71.2 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 46/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P+ ++ + I++ P L I I+ N + M M P TP E
Sbjct: 725 YKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEH 784
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + + + ++
Sbjct: 785 VLSVGNLVFTGIFTAEMFLKLIA----MDPYYYFQEGWNIFDGFIVSLSLMELSLANVEG 840
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 841 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 896
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 49/170 (28%), Positives = 93/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1188 LRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILE 1247
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K A GF+ + FT +AW WLDF+++A++ V++ G +LG + +LRT R LR
Sbjct: 1248 MLLKWCAYGFV-KFFT---NAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALR 1303
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1304 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1353
>UNIPROTKB|E9PBA5 [details] [associations]
symbol:SCN9A "Sodium channel protein type 9 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 SMART:SM00015
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583
Pfam:PF11933 EMBL:AC074101 EMBL:AC107082 EMBL:AC108146
IPI:IPI00154944 HGNC:HGNC:10597 ProteinModelPortal:E9PBA5
SMR:E9PBA5 PRIDE:E9PBA5 Ensembl:ENST00000303354 ArrayExpress:E9PBA5
Bgee:E9PBA5 Uniprot:E9PBA5
Length = 1989
Score = 600 (216.3 bits), Expect = 6.8e-57, P = 6.8e-57
Identities = 116/180 (64%), Positives = 149/180 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP-LFSLFIITTILTNCILMIM 59
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M M
Sbjct: 87 TFIVLNKGKTIFRFNATPALYMLSPFSPLRRISIKILVHSTLFSMLIMCTILTNCIFMTM 146
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T +
Sbjct: 147 NNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFV 206
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 207 NLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 266
Score = 185 (70.2 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1182 IRKTCYKIVEHSWFESFIVLMILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILE 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 1242 MLLKWIAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1297
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1298 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1347
Score = 178 (67.7 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 45/176 (25%), Positives = 89/176 (50%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+RF+ +W P+ ++ +I++ P L I I+ N + M M P E +
Sbjct: 716 YRFAHKFLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKN 775
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 776 VLAIGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
>UNIPROTKB|F1NN72 [details] [associations]
symbol:SCN2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 EMBL:AADN02020303 EMBL:AADN02020304
EMBL:AADN02020305 IPI:IPI00604180 Ensembl:ENSGALT00000017931
ArrayExpress:F1NN72 Uniprot:F1NN72
Length = 2008
Score = 600 (216.3 bits), Expect = 6.9e-57, P = 6.9e-57
Identities = 118/182 (64%), Positives = 147/182 (80%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPL-FS--LFIITTILTNCILM 57
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH F + I+ TILTNC+ M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSYPFQVVMLIMCTILTNCVFM 149
Query: 58 IMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT
Sbjct: 150 TMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTE 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
+DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+G
Sbjct: 210 FVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIG 269
Query: 177 LQ 178
LQ
Sbjct: 270 LQ 271
Score = 187 (70.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 734 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 793
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 794 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 849
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 850 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 905
Score = 174 (66.3 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1201 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1260
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1261 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1316
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1317 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1366
Score = 35 (17.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FR+ ++L ++
Sbjct: 5 VLVPPGPDSFRYFTRESLAAIE 26
>UNIPROTKB|E9PTC1 [details] [associations]
symbol:Scn5a "Sodium channel protein type 5 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 RGD:3637 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933 IPI:IPI00930911
Ensembl:ENSRNOT00000020679 ArrayExpress:E9PTC1 Uniprot:E9PTC1
Length = 1966
Score = 599 (215.9 bits), Expect = 8.6e-57, P = 8.6e-57
Identities = 115/179 (64%), Positives = 145/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 194 (73.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1143 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1202
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1203 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1258
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1259 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1308
>UNIPROTKB|E1C4S2 [details] [associations]
symbol:SCN2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 EMBL:AADN02020303 EMBL:AADN02020304
EMBL:AADN02020305 IPI:IPI00575055 Ensembl:ENSGALT00000017809
ArrayExpress:E1C4S2 Uniprot:E1C4S2
Length = 1993
Score = 599 (215.9 bits), Expect = 8.8e-57, P = 8.8e-57
Identities = 118/182 (64%), Positives = 148/182 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFS-LFIITTILTNCILM 57
TF+V++KGK IFRFSAT AL++L PFNP+R++AI ILVH P S + I+ TILTNC+ M
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILVHSYPFQSNMLIMCTILTNCVFM 149
Query: 58 IMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT
Sbjct: 150 TMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTE 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+G
Sbjct: 210 FVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIG 269
Query: 177 LQ 178
LQ
Sbjct: 270 LQ 271
Score = 187 (70.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 737 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 796
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 797 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 852
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 853 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 908
Score = 174 (66.3 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1204 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1263
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1264 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1319
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1320 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1369
Score = 35 (17.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FR+ ++L ++
Sbjct: 5 VLVPPGPDSFRYFTRESLAAIE 26
>ZFIN|ZDB-GENE-060906-1 [details] [associations]
symbol:scn1lab "sodium channel, voltage-gated, type I
like, alpha b" species:7955 "Danio rerio" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0006814 "sodium ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] [GO:0034765 "regulation of ion transmembrane
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA] [GO:0005272
"sodium channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096
SMART:SM00015 ZFIN:ZDB-GENE-060906-1 GO:GO:0035725 GO:GO:0005248
eggNOG:COG1226 HOGENOM:HOG000231755 GO:GO:0001518
HOVERGEN:HBG053100 OrthoDB:EOG4Z36CT InterPro:IPR024583
Pfam:PF11933 KO:K04834 EMBL:DQ149504 IPI:IPI00804861
RefSeq:NP_001038360.1 UniGene:Dr.87125 ProteinModelPortal:Q20JQ8
GeneID:559447 KEGG:dre:559447 CTD:559447 InParanoid:Q20JQ8
NextBio:20882971 Uniprot:Q20JQ8
Length = 1996
Score = 599 (215.9 bits), Expect = 8.8e-57, P = 8.8e-57
Identities = 113/179 (63%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++GK IFRF+AT AL++L PFNP+RR++I +LVH LFS I+ TILTNC M +
Sbjct: 91 TFIVLNRGKAIFRFNATPALYILSPFNPLRRISIRVLVHSLFSFVIMCTILTNCAFMTLS 150
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P ++ E FTGIYTFES +K++ARGF + FT+LRD WNWLDF VI +AYVT ++
Sbjct: 151 NPPEWAKNVEYTFTGIYTFESLIKILARGFCVGKFTFLRDPWNWLDFSVILMAYVTEFVN 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 269
Score = 187 (70.9 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 47/176 (26%), Positives = 95/176 (53%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
++F+ + +W P + ++ + I++ P L I I+ N + M M P T + +
Sbjct: 713 YKFANSFLIWDCSPAWLKVKEIMNMIVMDPFVDLAITICIVLNTLFMAMEHYPMTTQFSH 772
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
+ +FTGI+T E +KV+A L+ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 773 LLSVGNLVFTGIFTAEMCLKVIA----LDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 828
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 829 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 884
Score = 167 (63.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 46/170 (27%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + I + T +E + +FT I+ E
Sbjct: 1188 LRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILE 1247
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V++ G +L + +LRT R LR
Sbjct: 1248 MLLKWVAYGFA----KYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKSLRTLRALR 1303
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1304 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1353
>MGI|MGI:98251 [details] [associations]
symbol:Scn5a "sodium channel, voltage-gated, type V, alpha"
species:10090 "Mus musculus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=ISO;IC] [GO:0002027 "regulation of heart
rate" evidence=ISO] [GO:0003231 "cardiac ventricle development"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005244 "voltage-gated ion channel activity" evidence=IEA]
[GO:0005248 "voltage-gated sodium channel activity"
evidence=ISO;IDA] [GO:0005272 "sodium channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006814 "sodium ion transport"
evidence=ISO;IDA] [GO:0009986 "cell surface" evidence=ISO;IDA]
[GO:0010460 "positive regulation of heart rate" evidence=ISO]
[GO:0010765 "positive regulation of sodium ion transport"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IMP] [GO:0014704 "intercalated disc" evidence=ISO;IDA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISO]
[GO:0017134 "fibroblast growth factor binding" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030315 "T-tubule"
evidence=ISO;IDA] [GO:0030506 "ankyrin binding" evidence=ISO]
[GO:0034706 "sodium channel complex" evidence=IPI] [GO:0034765
"regulation of ion transmembrane transport" evidence=IDA]
[GO:0035725 "sodium ion transmembrane transport"
evidence=IEA;ISO;IDA] [GO:0042383 "sarcolemma" evidence=ISO]
[GO:0044325 "ion channel binding" evidence=ISO] [GO:0045760
"positive regulation of action potential" evidence=ISO] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0060048
"cardiac muscle contraction" evidence=ISO] [GO:0060307 "regulation
of ventricular cardiac muscle cell membrane repolarization"
evidence=ISO] [GO:0060371 "regulation of atrial cardiac muscle cell
membrane depolarization" evidence=ISO] [GO:0060372 "regulation of
atrial cardiac muscle cell membrane repolarization" evidence=ISO]
[GO:0060373 "regulation of ventricular cardiac muscle cell membrane
depolarization" evidence=ISO] [GO:0071277 "cellular response to
calcium ion" evidence=ISO] [GO:0086002 "regulation of cardiac
muscle cell action potential involved in contraction" evidence=ISO]
[GO:0086004 "regulation of cardiac muscle cell contraction"
evidence=ISO;IMP] [GO:0086005 "regulation of ventricular cardiac
muscle cell action potential" evidence=ISO] [GO:0086006
"voltage-gated sodium channel activity involved in regulation of
cardiac muscle cell action potential" evidence=ISO;IMP] [GO:0086010
"membrane depolarization involved in regulation of action
potential" evidence=ISO] [GO:0086012 "membrane depolarization
involved in regulation of cardiac muscle cell action potential"
evidence=ISO] [GO:0086063 "voltage-gated sodium channel activity
involved in regulation of SA node cell action potential"
evidence=IMP] [GO:0086067 "AV node cell to bundle of His cell
communication" evidence=ISO] [GO:0086069 "bundle of His cell to
Purkinje myocyte communication" evidence=ISO] [GO:0086070 "SA node
cell to atrial cardiac muscle cell communication" evidence=ISO]
[GO:0086091 "regulation of heart rate by cardiac conduction"
evidence=ISO;IMP] [GO:0097110 "scaffold protein binding"
evidence=ISO] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
PROSITE:PS50096 SMART:SM00015 MGI:MGI:98251 GO:GO:0014704
GO:GO:0009986 GO:GO:0071277 GO:GO:0030315 GO:GO:0014070
GO:GO:0086004 GO:GO:0086091 eggNOG:COG1226 GO:GO:0003231
HOGENOM:HOG000231755 GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
HSSP:P04775 CTD:6331 KO:K04838 EMBL:AJ271477 EMBL:AK147254
EMBL:AK147517 EMBL:AC121922 EMBL:AC171201 IPI:IPI00624932
IPI:IPI00894690 RefSeq:NP_001240789.1 RefSeq:NP_067519.2
UniGene:Mm.103584 ProteinModelPortal:Q9JJV9 SMR:Q9JJV9
DIP:DIP-46142N STRING:Q9JJV9 PhosphoSite:Q9JJV9 PaxDb:Q9JJV9
PRIDE:Q9JJV9 Ensembl:ENSMUST00000117911 Ensembl:ENSMUST00000120420
GeneID:20271 KEGG:mmu:20271 UCSC:uc009sbc.1
GeneTree:ENSGT00650000092939 InParanoid:Q3UH91 NextBio:297947
Bgee:Q9JJV9 Genevestigator:Q9JJV9 GO:GO:0086063 Uniprot:Q9JJV9
Length = 2019
Score = 599 (215.9 bits), Expect = 9.0e-57, P = 9.0e-57
Identities = 115/179 (64%), Positives = 145/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 194 (73.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 689 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 748
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 749 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 804
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 805 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 859
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>RGD|3637 [details] [associations]
symbol:Scn5a "sodium channel, voltage-gated, type V, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA;ISO] [GO:0002027 "regulation of heart
rate" evidence=ISO] [GO:0003231 "cardiac ventricle development"
evidence=ISO] [GO:0003360 "brainstem development" evidence=IEP]
[GO:0005248 "voltage-gated sodium channel activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA;ISO] [GO:0005783 "endoplasmic reticulum"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006814
"sodium ion transport" evidence=ISO;ISS] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010460 "positive regulation of heart rate"
evidence=IMP] [GO:0010765 "positive regulation of sodium ion
transport" evidence=ISO] [GO:0014070 "response to organic cyclic
compound" evidence=ISO] [GO:0014704 "intercalated disc"
evidence=ISO;ISS;IDA] [GO:0014894 "response to denervation involved
in regulation of muscle adaptation" evidence=IMP] [GO:0016021
"integral to membrane" evidence=ISO;ISS] [GO:0017134 "fibroblast
growth factor binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0021537 "telencephalon development" evidence=IEP]
[GO:0021549 "cerebellum development" evidence=IEP] [GO:0030315
"T-tubule" evidence=ISO;IDA] [GO:0030506 "ankyrin binding"
evidence=ISO;IDA;IPI] [GO:0034706 "sodium channel complex"
evidence=ISO] [GO:0034765 "regulation of ion transmembrane transport"
evidence=ISO] [GO:0035725 "sodium ion transmembrane transport"
evidence=ISO;IMP] [GO:0042383 "sarcolemma" evidence=ISO] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEP] [GO:0044325
"ion channel binding" evidence=ISO] [GO:0045760 "positive regulation
of action potential" evidence=IMP] [GO:0050679 "positive regulation
of epithelial cell proliferation" evidence=IMP] [GO:0051899 "membrane
depolarization" evidence=ISO] [GO:0060048 "cardiac muscle
contraction" evidence=ISO] [GO:0060307 "regulation of ventricular
cardiac muscle cell membrane repolarization" evidence=ISO]
[GO:0060371 "regulation of atrial cardiac muscle cell membrane
depolarization" evidence=ISO] [GO:0060372 "regulation of atrial
cardiac muscle cell membrane repolarization" evidence=ISO]
[GO:0060373 "regulation of ventricular cardiac muscle cell membrane
depolarization" evidence=ISO] [GO:0071277 "cellular response to
calcium ion" evidence=ISO;ISS] [GO:0086002 "regulation of cardiac
muscle cell action potential involved in contraction" evidence=ISO]
[GO:0086004 "regulation of cardiac muscle cell contraction"
evidence=ISO] [GO:0086005 "regulation of ventricular cardiac muscle
cell action potential" evidence=ISO] [GO:0086006 "voltage-gated
sodium channel activity involved in regulation of cardiac muscle cell
action potential" evidence=ISO] [GO:0086010 "membrane depolarization
involved in regulation of action potential" evidence=ISO] [GO:0086012
"membrane depolarization involved in regulation of cardiac muscle
cell action potential" evidence=ISO] [GO:0086063 "voltage-gated
sodium channel activity involved in regulation of SA node cell action
potential" evidence=ISO] [GO:0086067 "AV node cell to bundle of His
cell communication" evidence=ISO] [GO:0086069 "bundle of His cell to
Purkinje myocyte communication" evidence=ISO] [GO:0086070 "SA node
cell to atrial cardiac muscle cell communication" evidence=ISO]
[GO:0086091 "regulation of heart rate by cardiac conduction"
evidence=ISO] [GO:0097110 "scaffold protein binding" evidence=ISO]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR008053 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01666 PROSITE:PS50096 SMART:SM00015 RGD:3637
GO:GO:0016021 GO:GO:0014704 GO:GO:0071277 GO:GO:0030315 GO:GO:0021549
GO:GO:0045760 GO:GO:0010460 GO:GO:0042475 GO:GO:0005248 GO:GO:0050679
GO:GO:0021537 eggNOG:COG1226 GO:GO:0030506 GO:GO:0014894
GO:GO:0003360 HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
InterPro:IPR024583 Pfam:PF11933 CTD:6331 KO:K04838 EMBL:M27902
EMBL:AF353637 IPI:IPI00231550 IPI:IPI00930911 PIR:A33996
RefSeq:NP_001153634.1 RefSeq:NP_037257.1 UniGene:Rn.32074
ProteinModelPortal:P15389 STRING:P15389 PhosphoSite:P15389
PRIDE:P15389 GeneID:25665 KEGG:rno:25665 UCSC:RGD:3637
BindingDB:P15389 ChEMBL:CHEMBL3866 NextBio:607581 ArrayExpress:P15389
Genevestigator:P15389 GermOnline:ENSRNOG00000015049 Uniprot:P15389
Length = 2019
Score = 599 (215.9 bits), Expect = 9.0e-57, P = 9.0e-57
Identities = 115/179 (64%), Positives = 145/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH LFS+ I+ TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSLFSMLIMCTILTNCVFMAQH 152
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 153 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVD 212
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 271
Score = 194 (73.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 690 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 749
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 750 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 805
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 806 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 860
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1196 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1255
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1256 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1311
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1312 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1361
>UNIPROTKB|E2R0P1 [details] [associations]
symbol:SCN9A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0005248 "voltage-gated sodium channel activity" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
SMART:SM00015 GO:GO:0009636 GO:GO:0048266 GO:GO:0006954
GO:GO:0009791 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
OMA:LMNVSQN EMBL:AAEX03017732 Ensembl:ENSCAFT00000018336
Uniprot:E2R0P1
Length = 1988
Score = 598 (215.6 bits), Expect = 1.1e-56, P = 1.1e-56
Identities = 116/181 (64%), Positives = 149/181 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMI 58
TF+V++KGK IFRF+AT AL++L PF+P+RR++I ILVH LFS+ I+ TILTNCI M
Sbjct: 87 TFIVLNKGKAIFRFNATPALYMLSPFSPLRRISIKILVHSSTLFSMLIMCTILTNCIFMT 146
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+VI AY+T
Sbjct: 147 MSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVVIVFAYLTEF 206
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 207 VNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 266
Query: 178 Q 178
Q
Sbjct: 267 Q 267
Score = 185 (70.2 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1182 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1241
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 1242 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1297
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1298 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1347
Score = 185 (70.2 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P T E
Sbjct: 716 YRFAHTFLIWNCSPYWIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 775
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 776 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 831
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 832 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 887
>UNIPROTKB|E7ET19 [details] [associations]
symbol:SCN5A "Sodium channel protein type 5 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933 EMBL:AP006241
HGNC:HGNC:10593 IPI:IPI00926465 ProteinModelPortal:E7ET19
SMR:E7ET19 Ensembl:ENST00000449557 ArrayExpress:E7ET19 Bgee:E7ET19
Uniprot:E7ET19
Length = 1962
Score = 596 (214.9 bits), Expect = 1.8e-56, P = 1.8e-56
Identities = 115/179 (64%), Positives = 145/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 181 (68.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV------I 71
+W P + I++ +++ P L I I+ N + M + T E E+ +
Sbjct: 696 IWECCPLWMSIKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLV 755
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFR 130
FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR
Sbjct: 756 FTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFR 811
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+LR K P L T++ + SV L ++ ++ + +FA++G+Q GK E D
Sbjct: 812 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFGKNYSELRD 870
Score = 176 (67.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1140 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1199
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1200 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1255
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1256 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1305
>UNIPROTKB|Q14524 [details] [associations]
symbol:SCN5A "Sodium channel protein type 5 subunit alpha"
species:9606 "Homo sapiens" [GO:0005248 "voltage-gated sodium
channel activity" evidence=IDA] [GO:0071277 "cellular response to
calcium ion" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IDA] [GO:0006814 "sodium ion transport" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0097110 "scaffold
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030506 "ankyrin binding" evidence=IDA]
[GO:0014704 "intercalated disc" evidence=ISS;IDA] [GO:0030315
"T-tubule" evidence=IDA] [GO:0086070 "SA node cell to atrial
cardiac muscle cell communication" evidence=IMP] [GO:0086067 "AV
node cell to bundle of His cell communication" evidence=IMP]
[GO:0002027 "regulation of heart rate" evidence=IMP] [GO:0086006
"voltage-gated sodium channel activity involved in regulation of
cardiac muscle cell action potential" evidence=IDA;IMP] [GO:0005516
"calmodulin binding" evidence=IPI] [GO:0009986 "cell surface"
evidence=IDA] [GO:0060371 "regulation of atrial cardiac muscle cell
membrane depolarization" evidence=IMP] [GO:0003360 "brainstem
development" evidence=ISS] [GO:0014894 "response to denervation
involved in regulation of muscle adaptation" evidence=ISS]
[GO:0021537 "telencephalon development" evidence=ISS] [GO:0021549
"cerebellum development" evidence=ISS] [GO:0042475 "odontogenesis
of dentin-containing tooth" evidence=ISS] [GO:0045760 "positive
regulation of action potential" evidence=ISS] [GO:0050679 "positive
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0003231 "cardiac ventricle development" evidence=ISS]
[GO:0086004 "regulation of cardiac muscle cell contraction"
evidence=IMP] [GO:0086046 "membrane depolarization involved in
regulation of SA node cell action potential" evidence=ISS]
[GO:0086012 "membrane depolarization involved in regulation of
cardiac muscle cell action potential" evidence=IMP] [GO:0051899
"membrane depolarization" evidence=IDA] [GO:0060307 "regulation of
ventricular cardiac muscle cell membrane repolarization"
evidence=IMP] [GO:0086091 "regulation of heart rate by cardiac
conduction" evidence=IMP] [GO:0010765 "positive regulation of
sodium ion transport" evidence=IDA] [GO:0035725 "sodium ion
transmembrane transport" evidence=IDA;IMP] [GO:0001518
"voltage-gated sodium channel complex" evidence=IC;IDA] [GO:0086002
"regulation of cardiac muscle cell action potential involved in
contraction" evidence=IMP] [GO:0060373 "regulation of ventricular
cardiac muscle cell membrane depolarization" evidence=IMP]
[GO:0060048 "cardiac muscle contraction" evidence=IMP] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0086005 "regulation of ventricular cardiac muscle
cell action potential" evidence=IMP] [GO:0086010 "membrane
depolarization involved in regulation of action potential"
evidence=IDA] [GO:0086069 "bundle of His cell to Purkinje myocyte
communication" evidence=IMP] [GO:0044325 "ion channel binding"
evidence=IPI] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005901 "caveola" evidence=TAS] [GO:0060372 "regulation of
atrial cardiac muscle cell membrane repolarization" evidence=IMP]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR008053 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01666 PROSITE:PS50096 SMART:SM00015
GO:GO:0005783 Reactome:REACT_111045 GO:GO:0014704 GO:GO:0009986
GO:GO:0071277 DrugBank:DB00280 DrugBank:DB00908 Orphanet:334
Orphanet:154 GO:GO:0030315 GO:GO:0060048 GO:GO:0021549
GO:GO:0045760 GO:GO:0042475 GO:GO:0010765 Orphanet:101016
DrugBank:DB00532 GO:GO:0086046 GO:GO:0086091 GO:GO:0086005
GO:GO:0060307 DrugBank:DB01244 GO:GO:0050679 GO:GO:0021537
eggNOG:COG1226 Orphanet:130 DrugBank:DB01388 DrugBank:DB00661
GO:GO:0030506 GO:GO:0060372 GO:GO:0060371 PDB:2L53 PDB:4DCK
PDB:4DJC PDBsum:2L53 PDBsum:4DCK PDBsum:4DJC DrugBank:DB00527
GO:GO:0014894 MIM:272120 GO:GO:0060373 DrugBank:DB01035
GO:GO:0003360 DrugBank:DB00281 DrugBank:DB00379 DrugBank:DB01182
DrugBank:DB00740 DrugBank:DB00564 DrugBank:DB00252 DrugBank:DB01320
DrugBank:DB00776 DrugBank:DB01228 DrugBank:DB01195 DrugBank:DB00907
MIM:108770 Orphanet:1344 GO:GO:0086067 GO:GO:0086069
Orphanet:228140 DrugBank:DB00555 Orphanet:166282 GO:GO:0003231
Orphanet:871 GO:GO:0001518 HOVERGEN:HBG053100 InterPro:IPR024583
Pfam:PF11933 GO:GO:0086006 EMBL:M77235 EMBL:AY038064 EMBL:AY148488
EMBL:AF482988 EMBL:AB158469 EMBL:AB158470 EMBL:EF629346
EMBL:EF629347 EMBL:DQ784809 EMBL:EF179185 EMBL:AP006241
EMBL:BC140813 EMBL:BC144621 EMBL:AB208866 IPI:IPI00031422
IPI:IPI00377006 IPI:IPI00791220 IPI:IPI00896549 IPI:IPI00930104
IPI:IPI01013301 PIR:A38195 RefSeq:NP_000326.2 RefSeq:NP_001092874.1
RefSeq:NP_001092875.1 RefSeq:NP_001153632.1 RefSeq:NP_001153633.1
RefSeq:NP_932173.1 UniGene:Hs.517898 PDB:2KBI PDBsum:2KBI
ProteinModelPortal:Q14524 SMR:Q14524 DIP:DIP-38416N DIP:DIP-46144N
IntAct:Q14524 MINT:MINT-249922 STRING:Q14524 TCDB:1.A.1.10.3
PhosphoSite:Q14524 DMDM:215273881 PaxDb:Q14524 PRIDE:Q14524
Ensembl:ENST00000333535 Ensembl:ENST00000423572
Ensembl:ENST00000443581 GeneID:6331 KEGG:hsa:6331 UCSC:uc021wvn.1
UCSC:uc021wvo.1 CTD:6331 GeneCards:GC03M038589 HGNC:HGNC:10593
MIM:113900 MIM:600163 MIM:601144 MIM:601154 MIM:603829 MIM:603830
MIM:608567 MIM:614022 neXtProt:NX_Q14524 PharmGKB:PA304
InParanoid:Q14524 KO:K04838 BindingDB:Q14524 ChEMBL:CHEMBL1980
DrugBank:DB00868 DrugBank:DB00754 DrugBank:DB00473 DrugBank:DB00192
DrugBank:DB00680 DrugBank:DB00750 DrugBank:DB01056
EvolutionaryTrace:Q14524 GenomeRNAi:6331 NextBio:24578
ArrayExpress:Q14524 Bgee:Q14524 CleanEx:HS_SCN5A
Genevestigator:Q14524 GermOnline:ENSG00000183873 Uniprot:Q14524
Length = 2016
Score = 596 (214.9 bits), Expect = 1.9e-56, P = 1.9e-56
Identities = 115/179 (64%), Positives = 145/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL+VL PF+PIRR A+ ILVH LF++ I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPIRRAAVKILVHSLFNMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 181 (68.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/180 (28%), Positives = 91/180 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV------I 71
+W P + I++ +++ P L I I+ N + M + T E E+ +
Sbjct: 696 IWECCPLWMSIKQGVKLVVMDPFTDLTITMCIVLNTLFMALEHYNMTSEFEEMLQVGNLV 755
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNLAALRTFR 130
FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ + NL+ LR+FR
Sbjct: 756 FTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMSNLSVLRSFR 811
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
+LR K P L T++ + SV L ++ ++ + +FA++G+Q GK E D
Sbjct: 812 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ-LFGKNYSELRD 870
Score = 176 (67.0 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ +I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1194 LRKTCYHIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1253
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1254 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1309
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1310 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1359
>UNIPROTKB|E1B9X0 [details] [associations]
symbol:LOC517426 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 EMBL:DAAA02049330
IPI:IPI00700698 Ensembl:ENSBTAT00000006265 OMA:NACESEN
Uniprot:E1B9X0
Length = 1834
Score = 593 (213.8 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 112/179 (62%), Positives = 145/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L PF+ +RR AI +L+H +FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKSIFRFSATPALYILSPFSIVRRCAIKVLIHSYPGMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P+ + E FTGIYTFES +K++ARGF ++ FT+LRD WNWLDF VI +AY+T +D
Sbjct: 152 DPPSWSKHVEYTFTGIYTFESLIKILARGFCIDDFTFLRDPWNWLDFSVIMMAYLTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 212 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGLQ 270
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 46/168 (27%), Positives = 88/168 (52%)
Query: 20 LW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIEST----EVI 71
+W P+ +++ I++ P L I I+ N + M M P T +S ++
Sbjct: 551 IWNCCTPWVKFKKIVNLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDSVLNVGNLV 610
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFR 130
FTGI+T E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR
Sbjct: 611 FTGIFTAEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFR 666
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 667 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 714
Score = 171 (65.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP--------TI-ESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + TI E + +FT I+ E
Sbjct: 1017 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIHIEQRRVIRTILEYADKVFTYIFILE 1076
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1077 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1132
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1133 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1182
>UNIPROTKB|E1BQT2 [details] [associations]
symbol:SCN2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0014704
"intercalated disc" evidence=IEA] [GO:0030315 "T-tubule"
evidence=IEA] [GO:0033270 "paranode region of axon" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 InterPro:IPR024583
Pfam:PF11933 OMA:EDPTARQ EMBL:AADN02020303 EMBL:AADN02020304
EMBL:AADN02020305 IPI:IPI00572362 Ensembl:ENSGALT00000017933
ArrayExpress:E1BQT2 Uniprot:E1BQT2
Length = 2013
Score = 592 (213.5 bits), Expect = 5.0e-56, P = 5.0e-56
Identities = 118/187 (63%), Positives = 149/187 (79%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH-------P-LFSLFIITTILT 52
TF+V++KGK IFRFSAT AL++L PFNP+R++AI IL+ P LFS+ I+ TILT
Sbjct: 90 TFIVLNKGKAIFRFSATSALYMLTPFNPLRKIAIKILIFWLTFLDSPTLFSMLIMCTILT 149
Query: 53 NCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
NC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI
Sbjct: 150 NCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITF 209
Query: 112 AYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
AYVT ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSV
Sbjct: 210 AYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSV 269
Query: 172 FALMGLQ 178
FAL+GLQ
Sbjct: 270 FALIGLQ 276
Score = 187 (70.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P+ ++ + I++ P L I I+ N + M M P E
Sbjct: 739 YKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSG 798
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 799 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 854
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 855 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 910
Score = 174 (66.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1206 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1265
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1266 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1321
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1322 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1371
Score = 35 (17.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FR+ ++L ++
Sbjct: 5 VLVPPGPDSFRYFTRESLAAIE 26
>UNIPROTKB|F1SJS9 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0086091 "regulation of heart rate by cardiac
conduction" evidence=IEA] [GO:0086063 "voltage-gated sodium channel
activity involved in regulation of SA node cell action potential"
evidence=IEA] [GO:0086004 "regulation of cardiac muscle cell
contraction" evidence=IEA] [GO:0030315 "T-tubule" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IEA] [GO:0014070 "response
to organic cyclic compound" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0003231 "cardiac ventricle development"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
SMART:SM00015 GO:GO:0014704 GO:GO:0030315 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
GeneTree:ENSGT00650000092939 OMA:LNGKRNS EMBL:FP102135
Ensembl:ENSSSCT00000012327 Uniprot:F1SJS9
Length = 2021
Score = 592 (213.5 bits), Expect = 5.0e-56, P = 5.0e-56
Identities = 114/179 (63%), Positives = 144/179 (80%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT+AL++L PF+PIRR A+ ILVH LF + I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYILSPFHPIRRAAVKILVHSLFIMLIMCTILTNCVFMAQH 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +D
Sbjct: 152 DPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIIMAYTTEFVD 211
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 212 LGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 270
Score = 193 (73.0 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 692 RFAQRYLIWECCPLWMSIKQKVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTTEFEEM 751
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 752 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 807
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 808 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 862
Score = 166 (63.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 44/170 (25%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1198 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERRTIKVLLEYADKMFTYVFVLE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ G ++G + +LRT R LR
Sbjct: 1258 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANALGFAEMGPIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>ZFIN|ZDB-GENE-051201-2 [details] [associations]
symbol:scn4aa "sodium channel, voltage-gated, type
IV, alpha, a" species:7955 "Danio rerio" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA]
[GO:0005248 "voltage-gated sodium channel activity" evidence=IEA]
[GO:0006814 "sodium ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005272 "sodium channel activity" evidence=IEA]
[GO:0034765 "regulation of ion transmembrane transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096
SMART:SM00015 ZFIN:ZDB-GENE-051201-2 GO:GO:0035725 GO:GO:0005248
eggNOG:COG1226 EMBL:DQ149506 EMBL:DQ221253 IPI:IPI00613234
RefSeq:NP_001034914.1 UniGene:Dr.117129 ProteinModelPortal:Q2XVR3
GeneID:572442 KEGG:dre:572442 CTD:572442 HOGENOM:HOG000231755
KO:K04837 NextBio:20890956 GO:GO:0001518 Uniprot:Q2XVR3
Length = 1829
Score = 590 (212.7 bits), Expect = 6.9e-56, P = 6.9e-56
Identities = 111/179 (62%), Positives = 147/179 (82%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+SKG IFRFS+ A++ + PF+ +RR AI IL+H LFS+FI+ TIL+NC+ M M
Sbjct: 85 TFIVISKGNTIFRFSSEPAMFCISPFSIVRRGAIKILIHSLFSMFIMITILSNCVFMTMS 144
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P T E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 145 NPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGPFTFLRDPWNWLDFMVISMAYVTEFVD 204
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK + DV+ILT+F+L+VFAL+GLQ
Sbjct: 205 LGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKMIDVMILTIFALAVFALIGLQ 263
Score = 181 (68.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 50/170 (29%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT--------PTI-ESTEVIFTGIYTFE 79
+RR I+ H F FII IL + + TI E + +FT I+ E
Sbjct: 986 LRRTCFTIVEHDYFETFIIFMILLSSGALAFEDINIERRRVIKTILEYADKVFTYIFIVE 1045
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V+ MG +LG + +LRT R LR
Sbjct: 1046 MLLKWVAYGFK----TYFTNAWCWLDFLIVDVSLVSLTANLMGYSELGAIKSLRTLRALR 1101
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1102 PLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1151
Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 46/176 (26%), Positives = 90/176 (51%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ W P+ ++ ++++ P L I I+ N + M M P +P E
Sbjct: 553 YKFADMFLKWDCCAPWILFKKWVHFVVMDPFVDLGITICIVLNTLFMAMEHYPMSPHFEH 612
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y + WN D I++ L+ V +G+ ++
Sbjct: 613 VLSVGNLVFTGIFTAEMVFKLIA----MDPYYYFQVGWNIFDSIIVTLSLVELGLANVQG 668
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 669 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 724
>ZFIN|ZDB-GENE-060906-2 [details] [associations]
symbol:scn8ab "sodium channel, voltage-gated, type
VIII, alpha b" species:7955 "Danio rerio" [GO:0005248
"voltage-gated sodium channel activity" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006814 "sodium ion transport"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005272 "sodium channel activity"
evidence=IEA] [GO:0034765 "regulation of ion transmembrane
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR008054 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01667 SMART:SM00015 ZFIN:ZDB-GENE-060906-2
GO:GO:0035725 GO:GO:0005248 eggNOG:COG1226 HOGENOM:HOG000231755
GO:GO:0001518 HOVERGEN:HBG053100 InterPro:IPR024583 Pfam:PF11933
KO:K04840 EMBL:DQ149509 IPI:IPI00864840 RefSeq:NP_001038648.1
UniGene:Dr.87506 ProteinModelPortal:Q20JQ3 GeneID:793996
KEGG:dre:793996 CTD:793996 InParanoid:Q20JQ3 NextBio:20931667
Uniprot:Q20JQ3
Length = 1958
Score = 590 (212.7 bits), Expect = 7.7e-56, P = 7.7e-56
Identities = 111/179 (62%), Positives = 145/179 (81%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT +L+++ PFN R++AI IL+H FS+ I+ TILTNC+ M
Sbjct: 95 TFIVLNKGKTIFRFSATPSLYIISPFNLFRQIAIKILIHSFFSMIIMCTILTNCVFMTFS 154
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P + E FTGIYTFES K++ARGF ++ FT+LRD WNWLDF+VI++AYVT +D
Sbjct: 155 NPPEWSKQVEYTFTGIYTFESLTKIVARGFCIDDFTFLRDPWNWLDFMVISMAYVTEFVD 214
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT++++P LKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 215 LGNVSALRTFRVLRALKTISVIPRLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQ 273
Score = 201 (75.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 50/176 (28%), Positives = 93/176 (52%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ T +W P + I+ + I++ P L I I+ N + M M P TP E
Sbjct: 697 YKFANTFLIWECCPIWIKIKEIVNLIVMDPFVDLAITICIVLNTVFMAMEHYPMTPRFEE 756
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E K++A ++ + Y ++ WN D +++L+ V +G+ D+
Sbjct: 757 VLSVGNLVFTGIFTAEMFAKLIA----MDPYYYFQEGWNIFDGFIVSLSLVELGLADVEG 812
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 813 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 868
Score = 168 (64.2 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 37/125 (29%), Positives = 73/125 (58%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI- 118
+E + +FT I+ E +K +A GF+ Y +AW WLDF ++ ++ V++ G
Sbjct: 1207 LEYADRVFTYIFILEMLLKWVAYGFV----KYFTNAWCWLDFFIVDVSIVSLIANALGYS 1262
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG + +LRT R LR L+ ++ G++ +V A++ ++ ++ +V ++ + +F++MG+
Sbjct: 1263 DLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVPLVCLIFWLIFSIMGVN 1322
Query: 179 DSRGK 183
GK
Sbjct: 1323 LFAGK 1327
>ZFIN|ZDB-GENE-051201-1 [details] [associations]
symbol:scn4ab "sodium channel, voltage-gated, type
IV, alpha, b" species:7955 "Danio rerio" [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0006814 "sodium ion
transport" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005272 "sodium channel activity" evidence=IEA] [GO:0034765
"regulation of ion transmembrane transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096
ZFIN:ZDB-GENE-051201-1 GO:GO:0035725 GO:GO:0005248 eggNOG:COG1226
HOGENOM:HOG000231755 GO:GO:0001518 EMBL:DQ149505 EMBL:DQ221254
EMBL:BC163558 IPI:IPI00862982 RefSeq:NP_001038530.1
UniGene:Dr.67010 ProteinModelPortal:Q20JQ7
Ensembl:ENSDART00000104004 GeneID:564977 KEGG:dre:564977 CTD:564977
GeneTree:ENSGT00560000076721 OrthoDB:EOG4ZCT3M NextBio:20885652
ArrayExpress:Q20JQ7 Bgee:Q20JQ7 Uniprot:Q20JQ7
Length = 1784
Score = 582 (209.9 bits), Expect = 4.7e-55, P = 4.7e-55
Identities = 111/179 (62%), Positives = 141/179 (78%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K I+RF+ A + L PFNP+RR AI IL+H LFSL I+ TILTNC+ M M
Sbjct: 91 TFIVIDKKNTIYRFNTEPACYCLSPFNPVRRAAIRILIHSLFSLVIMLTILTNCVFMAMS 150
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E +FTGIYTFE+ VKV++RGF + FT+LRD WNWLDF+VI++AY+T +D
Sbjct: 151 DPPGWSKILEYVFTGIYTFEAMVKVLSRGFCIGDFTFLRDPWNWLDFMVISMAYLTEFVD 210
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 211 LGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLADVMILTVFCLSVFALIGLQ 269
Score = 167 (63.8 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 43/162 (26%), Positives = 83/162 (51%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTEV------IFTGIYT 77
P+ +R+ ++ P L I I+ N + M M P ++ EV +FTGI+
Sbjct: 553 PWVKFKRIVYLFVMDPFVDLGITLCIVLNTVFMAMEHYPMSVHVEEVLAIGNLVFTGIFA 612
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFRVLRALK 136
E +K++A L+ + Y + WN D I++ ++ V + + D+ L+ LR+FR++R K
Sbjct: 613 AEMVLKLIA----LDPYYYFQVGWNIFDSIIVTMSLVELMLADVEGLSVLRSFRLMRVFK 668
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 669 LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 710
Score = 157 (60.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 45/170 (26%), Positives = 87/170 (51%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT---------IESTEVIFTGIYTFES 80
R+ I+ H F FII IL + + +E + +FT ++ E
Sbjct: 962 RKTCFAIVEHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVVEM 1021
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTMGI----DLGNLAALRTFRVLRA 134
+K +A GF + Y +AW WLDF+++ +L +T I +LG + +LRT R LR
Sbjct: 1022 LLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRP 1077
Query: 135 LKTVAIVPGLKTIV-GAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1078 LRALSRFEGMRVVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGK 1127
>UNIPROTKB|F1LMV4 [details] [associations]
symbol:Scn5a "Sodium channel protein type 5 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 RGD:3637 GO:GO:0014704 GO:GO:0030315
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583
Pfam:PF11933 OMA:LNGKRNS IPI:IPI00565433 Ensembl:ENSRNOT00000020962
ArrayExpress:F1LMV4 Uniprot:F1LMV4
Length = 2021
Score = 580 (209.2 bits), Expect = 9.4e-55, P = 9.4e-55
Identities = 114/180 (63%), Positives = 143/180 (79%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIIT-TILTNCILMIM 59
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILV F + +I TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVSSFFLIMLIMCTILTNCVFMAQ 152
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AYV+ I
Sbjct: 153 HDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYVSENI 212
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LGNL+ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 KLGNLSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 272
Score = 194 (73.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 691 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 750
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 751 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 806
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 807 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 861
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1198 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1258 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>UNIPROTKB|Q2MZF0 [details] [associations]
symbol:SCN5A "Voltage-gated sodium channel type V alpha
polypeptide" species:9986 "Oryctolagus cuniculus" [GO:0014704
"intercalated disc" evidence=IDA] InterPro:IPR005821
InterPro:IPR008053 Pfam:PF00520 PRINTS:PR01666 GO:GO:0014704
GO:GO:0030315 GO:GO:0005248 eggNOG:COG1226 HOGENOM:HOG000231755
GO:GO:0001518 HOVERGEN:HBG091796 EMBL:DQ242484 UniGene:Ocu.1791
STRING:Q2MZF0 OrthoDB:EOG4H19TV ChEMBL:CHEMBL1770040 Uniprot:Q2MZF0
Length = 289
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 110/169 (65%), Positives = 136/169 (80%)
Query: 11 IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-IESTE 69
IFRFSAT+AL++L PF+PIRR A+ ILVH LFSL I+ TILTNC+ M P + E
Sbjct: 2 IFRFSATNALYLLSPFHPIRRAAVKILVHSLFSLLIMCTILTNCVFMAQHDPPPWTKYVE 61
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTF 129
FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +DLGN++ALRTF
Sbjct: 62 YAFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTF 121
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 122 RVLRALKTISVIAGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 170
>UNIPROTKB|F1PGU3 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
SMART:SM00015 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 GeneTree:ENSGT00650000092939
OMA:LNGKRNS EMBL:AAEX03013493 Ensembl:ENSCAFT00000008132
Uniprot:F1PGU3
Length = 2014
Score = 577 (208.2 bits), Expect = 2.0e-54, P = 2.0e-54
Identities = 115/181 (63%), Positives = 144/181 (79%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFSLFIITTILTNCILMI 58
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILVH PL L I+ TILTNC+ M
Sbjct: 92 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVHSYPLHML-IMCTILTNCVFMA 150
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T
Sbjct: 151 QHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEF 210
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GL
Sbjct: 211 VDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGL 270
Query: 178 Q 178
Q
Sbjct: 271 Q 271
Score = 195 (73.7 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 52/186 (27%), Positives = 96/186 (51%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 688 RFAQRYLIWECCPLWMSIKQRVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 747
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 748 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 803
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 804 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 863
Query: 184 KSDESH 189
S++ H
Sbjct: 864 YSEQRH 869
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT I+ E
Sbjct: 1192 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYIFVLE 1251
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1252 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1307
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1308 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFAGK 1357
>ZFIN|ZDB-GENE-040426-751 [details] [associations]
symbol:scn1a "sodium channel, voltage-gated, type
I, alpha" species:7955 "Danio rerio" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA;IC]
[GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA;IMP] [GO:0006814 "sodium ion transport" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] [GO:0005272 "sodium channel activity"
evidence=IEA] [GO:0034765 "regulation of ion transmembrane
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096
ZFIN:ZDB-GENE-040426-751 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
EMBL:AL929294 EMBL:CU929118 IPI:IPI00803885
Ensembl:ENSDART00000090979 ArrayExpress:F1Q4U9 Bgee:F1Q4U9
Uniprot:F1Q4U9
Length = 1956
Score = 572 (206.4 bits), Expect = 6.4e-54, P = 6.4e-54
Identities = 113/180 (62%), Positives = 143/180 (79%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH-PLFSLFIITTILTNCILMIM 59
TF+VVSK K+I+RF+AT AL++ FN +RR++I ILVH LF+ II TIL NC M+
Sbjct: 90 TFIVVSKKKEIYRFNATPALYIFSSFNLLRRISIQILVHFTLFNFIIICTILANCAFMVY 149
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
TP +S E +FTGIYT E+ VK+ ARGF + FT+LRD WNWLDFIVI +AYVT +
Sbjct: 150 TQTPDWAKSVEYVFTGIYTLEALVKITARGFCVGRFTFLRDPWNWLDFIVIVMAYVTEFV 209
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLG+++ALR FRVLRALKT+++VPGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GLQ
Sbjct: 210 DLGSVSALRAFRVLRALKTISVVPGLKTIVGALIQSVKKLSDVMILTLFCLSVFALVGLQ 269
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 48/177 (27%), Positives = 87/177 (49%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIM-------PGTP 63
F F+ +W P + I+ V I++ P LFI I+ N + M M P +
Sbjct: 704 FEFAENYLIWDCSPTWLRIKEVVHMIVMDPFADLFITICIVINTVFMAMECYPMDGPYSS 763
Query: 64 TIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LG 121
+ + V+F GI+T E KV+A L+ ++Y + WN D I++ L+ + + + L
Sbjct: 764 MLSTANVVFIGIFTAEMIFKVIA----LDPYSYFLEGWNIFDSIIVTLSLMELCLANVLS 819
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR FR+LR K P L ++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 820 GIGFLRPFRLLRVFKLAKSWPTLNMLIKIIGNSLGALSNLTLVLAIIVFIFAVVGMQ 876
Score = 158 (60.7 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 42/173 (24%), Positives = 90/173 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC--------ILMIMPGTPTI-ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + L TI E + +FT I+ E
Sbjct: 1157 LRQTCYNIVEHSWFETFIVFMILLSSGALAFEDIYLDTRKSVKTILEFADKVFTYIFILE 1216
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA-- 134
+K +A GF Y + W WLDF+++ ++ +++ ++ L+A+++ R LRA
Sbjct: 1217 MLLKWVAYGFA----KYFTNLWCWLDFVIVDVSLISLVANALNYSELSAIKSLRTLRAFR 1272
Query: 135 -LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSD 186
L+ ++ G++ +V A++ ++ ++ +V+++ + +F+++G+ GK S+
Sbjct: 1273 PLRALSRFDGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVNFFAGKFSE 1325
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 43/171 (25%), Positives = 83/171 (48%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE------VIFTGIYT 77
P N I+ + ++ F +FI+ I N + M++ +IE T VIF ++T
Sbjct: 1473 PKNKIQGLIFDLVTKQAFDIFIMVLIWLNMVTMMLETEDQSIEMTRALYWINVIFIVLFT 1532
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LGNLAALRT-FRVLR- 133
E +K++A L + + WN DFIV+ L+ V M + + T FRV+R
Sbjct: 1533 TECVLKMIA----LRHY-FFTVGWNVFDFIVVILSIVGMSLTEVIKKYFVSPTLFRVIRL 1587
Query: 134 -----ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
L+ + G++T++ A++ S+ L ++ +L + ++A+ G+ +
Sbjct: 1588 ARIGRVLRLIRSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN 1638
>UNIPROTKB|F1LPK3 [details] [associations]
symbol:Scn5a "Sodium channel protein type 5 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008053
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01666 SMART:SM00015 RGD:3637 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
GeneTree:ENSGT00650000092939 IPI:IPI00952416
Ensembl:ENSRNOT00000064555 ArrayExpress:F1LPK3 Uniprot:F1LPK3
Length = 2021
Score = 572 (206.4 bits), Expect = 6.7e-54, P = 6.7e-54
Identities = 112/180 (62%), Positives = 142/180 (78%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIIT-TILTNCILMIM 59
TF+V++KGK IFRFSAT+AL+VL PF+P+RR A+ ILV F + +I TILTNC+ M
Sbjct: 93 TFIVLNKGKTIFRFSATNALYVLSPFHPVRRAAVKILVSSFFLIMLIMCTILTNCVFMAQ 152
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P + E FT IYTFES VK++ARGF L +FT+LRD WNWLDF VI +AY T +
Sbjct: 153 HDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWNWLDFSVIVMAYTTEFV 212
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV++LT+F LSVFAL+GLQ
Sbjct: 213 DLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMVLTVFCLSVFALIGLQ 272
Score = 194 (73.4 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/175 (28%), Positives = 92/175 (52%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 691 RFAQHYLIWECCPLWMSIKQKVKFVVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 750
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 751 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 806
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 807 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 861
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT ++ E
Sbjct: 1198 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLE 1257
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ V T+G ++G + +LRT R LR
Sbjct: 1258 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALR 1313
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1314 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1363
>UNIPROTKB|F1M9G9 [details] [associations]
symbol:Scn2a1 "Protein Scn2a1" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0014704
"intercalated disc" evidence=IEA] [GO:0030315 "T-tubule"
evidence=IEA] [GO:0033270 "paranode region of axon" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 RGD:3632 GO:GO:0006915 GO:GO:0014704
GO:GO:0007399 GO:GO:0030424 GO:GO:0030315 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
InterPro:IPR024583 Pfam:PF11933 OMA:EDPTARQ IPI:IPI00476429
Ensembl:ENSRNOT00000007069 ArrayExpress:F1M9G9 Uniprot:F1M9G9
Length = 2007
Score = 567 (204.7 bits), Expect = 2.3e-53, P = 2.3e-53
Identities = 112/182 (61%), Positives = 143/182 (78%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVH--PLFSLFIITTILTNCILMI 58
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH P S ++ +L N + M
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHSYPFDSYSLVMLVLVNFVFMT 149
Query: 59 MPGTPT--IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
+ P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT
Sbjct: 150 IYNNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTE 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+G
Sbjct: 210 FVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIG 269
Query: 177 LQ 178
LQ
Sbjct: 270 LQ 271
Score = 182 (69.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P T S
Sbjct: 733 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 792
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 793 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 848
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 849 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 904
Score = 171 (65.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1200 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1259
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1260 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1315
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1316 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1365
Score = 38 (18.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>UNIPROTKB|F1M7F6 [details] [associations]
symbol:Scn2a1 "Protein Scn2a1" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 RGD:3632 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 InterPro:IPR024583 Pfam:PF11933
IPI:IPI00400699 PRIDE:F1M7F6 Ensembl:ENSRNOT00000045323
ArrayExpress:F1M7F6 Uniprot:F1M7F6
Length = 1957
Score = 566 (204.3 bits), Expect = 2.8e-53, P = 2.8e-53
Identities = 112/181 (61%), Positives = 142/181 (78%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFS--LFIITTILTNCILMI 58
TF+V++KGK I RFSAT AL++L PFNPIR++AI ILVH L + I+ + N + +I
Sbjct: 90 TFIVLNKGKAISRFSATSALYILTPFNPIRKLAIKILVHTLLESMIMIMCDFIRNDVFII 149
Query: 59 MPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT
Sbjct: 150 YNNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFTVITFAYVTEF 209
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 210 VDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL 269
Query: 178 Q 178
Q
Sbjct: 270 Q 270
Score = 182 (69.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 45/176 (25%), Positives = 92/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
++F+ +W P+ ++ V +++ P L I I+ N + M M P T S
Sbjct: 683 YKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSS 742
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D +++L+ + +G+ ++
Sbjct: 743 VLSVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVSLSLMELGLANVEG 798
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 799 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 854
Score = 171 (65.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1150 LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1209
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1210 MLLKWVAYGFQM----YFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1265
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1266 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1315
Score = 38 (18.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 3 VVVSKGKDIFRFSATDALWVLD 24
V+V G D FRF ++L ++
Sbjct: 5 VLVPPGPDSFRFFTRESLAAIE 26
>UNIPROTKB|Q9Y5Y9 [details] [associations]
symbol:SCN10A "Sodium channel protein type 10 subunit
alpha" species:9606 "Homo sapiens" [GO:0019233 "sensory perception
of pain" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0071439 "clathrin
complex" evidence=IEA] [GO:0007600 "sensory perception"
evidence=TAS] [GO:0006814 "sodium ion transport" evidence=TAS]
[GO:0002027 "regulation of heart rate" evidence=IMP] [GO:0060371
"regulation of atrial cardiac muscle cell membrane depolarization"
evidence=IMP] [GO:0086069 "bundle of His cell to Purkinje myocyte
communication" evidence=IMP] [GO:0086067 "AV node cell to bundle of
His cell communication" evidence=IMP] [GO:0055117 "regulation of
cardiac muscle contraction" evidence=IMP] [GO:0005248
"voltage-gated sodium channel activity" evidence=IDA] [GO:0035725
"sodium ion transmembrane transport" evidence=IDA] [GO:0034765
"regulation of ion transmembrane transport" evidence=IDA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IDA]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096
DrugBank:DB01161 DrugBank:DB00721 GO:GO:0007600 GO:GO:0002027
GO:GO:0005248 GO:GO:0055117 eggNOG:COG1226 GO:GO:0060371
DrugBank:DB00527 DrugBank:DB01002 DrugBank:DB00281 DrugBank:DB00296
DrugBank:DB00297 DrugBank:DB00907 GO:GO:0086067 GO:GO:0086069
GO:GO:0044299 HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
DrugBank:DB00473 CTD:6336 KO:K04842 EMBL:AF117907 EMBL:AC116038
EMBL:AC137625 IPI:IPI00872541 RefSeq:NP_006505.2 UniGene:Hs.250443
ProteinModelPortal:Q9Y5Y9 SMR:Q9Y5Y9 STRING:Q9Y5Y9
PhosphoSite:Q9Y5Y9 DMDM:205371821 PaxDb:Q9Y5Y9 PRIDE:Q9Y5Y9
Ensembl:ENST00000449082 GeneID:6336 KEGG:hsa:6336 UCSC:uc003ciq.3
GeneCards:GC03M038713 H-InvDB:HIX0030722 HGNC:HGNC:10582
HPA:CAB022171 MIM:604427 neXtProt:NX_Q9Y5Y9 PharmGKB:PA35000
InParanoid:Q9Y5Y9 OMA:CCPTWVK OrthoDB:EOG4229HT BindingDB:Q9Y5Y9
ChEMBL:CHEMBL5451 DrugBank:DB01086 DrugBank:DB00645
DrugBank:DB00961 DrugBank:DB00892 DrugBank:DB00807 GenomeRNAi:6336
NextBio:24604 Bgee:Q9Y5Y9 CleanEx:HS_SCN10A Genevestigator:Q9Y5Y9
GermOnline:ENSG00000185313 Uniprot:Q9Y5Y9
Length = 1956
Score = 565 (203.9 bits), Expect = 3.5e-53, P = 3.5e-53
Identities = 114/182 (62%), Positives = 135/182 (74%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1141 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIFVFE 1200
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ ++ + ALRT R LR
Sbjct: 1201 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR 1256
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1257 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1306
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 48/168 (28%), Positives = 85/168 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--G-TPTIEST----EVI 71
+W P + ++ + ++ P L I I+ N I M M G +PT E+ ++
Sbjct: 644 IWDCCPMWVKLKTILFGLVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIV 703
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFR 130
FT +T E K++A + + Y + WN D I++ ++ + +G+ G+L+ LR+FR
Sbjct: 704 FTIFFTAEMVFKIIA----FDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFR 759
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L T++ + SV L ++ I+ + VFAL+G Q
Sbjct: 760 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 807
>UNIPROTKB|G3MYM1 [details] [associations]
symbol:SCN10A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0086069 "bundle of His cell to Purkinje myocyte
communication" evidence=IEA] [GO:0086067 "AV node cell to bundle of
His cell communication" evidence=IEA] [GO:0060371 "regulation of
atrial cardiac muscle cell membrane depolarization" evidence=IEA]
[GO:0055117 "regulation of cardiac muscle contraction"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0002027 "regulation of heart rate" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 GO:GO:0035725
GO:GO:0005248 GO:GO:0044299 GO:GO:0001518
GeneTree:ENSGT00650000092939 OMA:CCPTWVK EMBL:DAAA02053656
Ensembl:ENSBTAT00000065485 Uniprot:G3MYM1
Length = 1964
Score = 559 (201.8 bits), Expect = 1.5e-52, P = 1.5e-52
Identities = 113/182 (62%), Positives = 135/182 (74%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFNPIRR+AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNPIRRIAIKVSVHSWFSLFITITILVNCVGMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAY DL
Sbjct: 151 ELP--ERMEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYAGEVTDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SVK L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 193 (73.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + ++ PT+ E T+ +FT I+ FE
Sbjct: 1148 VRKACFRIVEHSWFESFIVFMILLSSGALVFEDVYLDQKPTVKALLEYTDRVFTFIFVFE 1207
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVI------ALAYVTMGIDLGNLAALRTFRVLR 133
+K +A GF +Y +AW WLDF+++ +A + D+ ++ ALRT R LR
Sbjct: 1208 MLLKWVAYGFK----SYFTNAWCWLDFLIVNISLTSLIAKILQYSDMASIKALRTLRALR 1263
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1264 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGK 1313
Score = 171 (65.3 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/168 (28%), Positives = 83/168 (49%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--G-TPTIEST----EVI 71
+W P + ++ + I+ P L I I+ N + M M G +P E+ ++
Sbjct: 652 IWDCCPTWVKLKTLLFKIVTDPFAELTITLCIVVNTVFMAMEHYGMSPAFEAMLQIGNIV 711
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFR 130
FT +T E K++A L+ + Y + WN D I++ ++ + +G G+L LRTFR
Sbjct: 712 FTMFFTAEMVFKIIA----LDPYYYFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFR 767
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L T++ + SV L ++ I+ + +FAL+G Q
Sbjct: 768 LLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTIILAIIVFIFALVGKQ 815
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 45/171 (26%), Positives = 80/171 (46%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPTIESTEVI------FTGIYT 77
P N + I+ F + I+ I N I +M+ + E T+V+ F ++T
Sbjct: 1468 PLNKYQGFVFDIVTRQTFDIVIMVLICLNMITMMVETDEQSEEKTKVLNKINQFFVAVFT 1527
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY---VTMGI--DLGNLAALRTFRVL 132
E +K+ F L + Y + WN DF+V+ L+ V I LG+L + FRV+
Sbjct: 1528 GECVMKM----FALRHY-YFTNGWNVFDFVVVVLSIGSLVFSAIVSSLGSLFSPTLFRVI 1582
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDV---IILTMFSLSVFAL 174
R L+ + G++T++ A++ S+ L ++ + L MF S+F +
Sbjct: 1583 RLARVGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM 1633
>UNIPROTKB|F1SJS7 [details] [associations]
symbol:SCN10A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0044299 GO:GO:0001518 GeneTree:ENSGT00650000092939
OMA:CCPTWVK EMBL:FP102135 EMBL:FP312787 Ensembl:ENSSSCT00000012328
Uniprot:F1SJS7
Length = 1954
Score = 556 (200.8 bits), Expect = 3.2e-52, P = 3.2e-52
Identities = 113/182 (62%), Positives = 135/182 (74%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLNKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITITILVNCVGMTQS 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 ELP--ERIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGEAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 182 (69.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 48/170 (28%), Positives = 92/170 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ FE
Sbjct: 1138 VRKTCHRIVEHSWFESFIIFMILLSSGALAFEDFYLDQKPTVKALLEYTDRVFTFIFVFE 1197
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A G L S Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1198 MLLKWVAYG--LNS--YFTNAWCWLDFLIVNISLTSLIAKLLQYSDMASIKALRTLRALR 1253
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1254 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGK 1303
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/168 (29%), Positives = 85/168 (50%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--G-TPTIEST----EVI 71
+W P + ++++ I+ P L I I+ N I M M G +PT E+ ++
Sbjct: 641 IWKCCPTWVKLKKLLWSIVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIV 700
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFR 130
FT +T E K++A + + Y ++ WN D I++ ++ + +G+ G+L LRTFR
Sbjct: 701 FTVFFTAEMVFKIIA----FDPYYYFQNRWNIFDCIIVTVSLIELGMARKGSLTVLRTFR 756
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ I+ + VFAL+G Q
Sbjct: 757 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 804
>RGD|3629 [details] [associations]
symbol:Scn10a "sodium channel, voltage-gated, type X, alpha
subunit" species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA;ISO] [GO:0002027 "regulation of
heart rate" evidence=IEA;ISO] [GO:0005248 "voltage-gated sodium
channel activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006814
"sodium ion transport" evidence=ISO;IDA] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0019233 "sensory perception of pain"
evidence=IMP] [GO:0030424 "axon" evidence=ISO] [GO:0034765
"regulation of ion transmembrane transport" evidence=ISO] [GO:0035725
"sodium ion transmembrane transport" evidence=ISO] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEP] [GO:0044299
"C-fiber" evidence=ISO] [GO:0055117 "regulation of cardiac muscle
contraction" evidence=IEA;ISO] [GO:0060371 "regulation of atrial
cardiac muscle cell membrane depolarization" evidence=IEA;ISO]
[GO:0061337 "cardiac conduction" evidence=ISO] [GO:0071439 "clathrin
complex" evidence=IDA] [GO:0086067 "AV node cell to bundle of His
cell communication" evidence=IEA;ISO] [GO:0086069 "bundle of His cell
to Purkinje myocyte communication" evidence=IEA;ISO]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520
Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096 RGD:3629 GO:GO:0016021
GO:GO:0019233 GO:GO:0071439 GO:GO:0042475 GO:GO:0005248
eggNOG:COG1226 GO:GO:0044299 HOGENOM:HOG000231755 GO:GO:0001518
HOVERGEN:HBG053100 GeneTree:ENSGT00650000092939 CTD:6336 KO:K04842
OrthoDB:EOG4229HT EMBL:X92184 EMBL:U53833 EMBL:AJ623271
IPI:IPI00210089 IPI:IPI00515844 PIR:S68453 RefSeq:NP_058943.1
UniGene:Rn.10246 ProteinModelPortal:Q62968 IntAct:Q62968
STRING:Q62968 TCDB:1.A.1.10.6 PhosphoSite:Q62968 PRIDE:Q62968
Ensembl:ENSRNOT00000046864 GeneID:29571 KEGG:rno:29571 UCSC:RGD:3629
InParanoid:Q62968 BindingDB:Q62968 ChEMBL:CHEMBL4017 NextBio:609654
ArrayExpress:Q62968 Genevestigator:Q62968
GermOnline:ENSRNOG00000032473 Uniprot:Q62968
Length = 1956
Score = 552 (199.4 bits), Expect = 8.6e-52, P = 8.6e-52
Identities = 111/182 (60%), Positives = 134/182 (73%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITITILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKVEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/172 (27%), Positives = 91/172 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + + P ++S T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK S
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1309
Score = 165 (63.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/177 (25%), Positives = 85/177 (48%)
Query: 11 IFRFSATDALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPT----- 64
+ F+ +W P ++A++ LV P L I I+ N + M M P
Sbjct: 634 LISFAQKYLIWECCPKWRKFKMALFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFD 693
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-G 121
+++ ++FT +T E A K++A + + Y + WN D +++ ++ + + G
Sbjct: 694 AMLQAGNIVFTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKG 749
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+L+ LRTFR+LR K P L T++ + SV L ++ + + +FAL+G Q
Sbjct: 750 SLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
>UNIPROTKB|Q62968 [details] [associations]
symbol:Scn10a "Sodium channel protein type 10 subunit
alpha" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 RGD:3629 GO:GO:0016021 GO:GO:0019233 GO:GO:0071439
GO:GO:0042475 GO:GO:0005248 eggNOG:COG1226 GO:GO:0044299
HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
GeneTree:ENSGT00650000092939 CTD:6336 KO:K04842 OrthoDB:EOG4229HT
EMBL:X92184 EMBL:U53833 EMBL:AJ623271 IPI:IPI00210089
IPI:IPI00515844 PIR:S68453 RefSeq:NP_058943.1 UniGene:Rn.10246
ProteinModelPortal:Q62968 IntAct:Q62968 STRING:Q62968
TCDB:1.A.1.10.6 PhosphoSite:Q62968 PRIDE:Q62968
Ensembl:ENSRNOT00000046864 GeneID:29571 KEGG:rno:29571
UCSC:RGD:3629 InParanoid:Q62968 BindingDB:Q62968 ChEMBL:CHEMBL4017
NextBio:609654 ArrayExpress:Q62968 Genevestigator:Q62968
GermOnline:ENSRNOG00000032473 Uniprot:Q62968
Length = 1956
Score = 552 (199.4 bits), Expect = 8.6e-52, P = 8.6e-52
Identities = 111/182 (60%), Positives = 134/182 (73%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFMVLNKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITITILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E +FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKVEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/172 (27%), Positives = 91/172 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + + P ++S T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK S
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1309
Score = 165 (63.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/177 (25%), Positives = 85/177 (48%)
Query: 11 IFRFSATDALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPT----- 64
+ F+ +W P ++A++ LV P L I I+ N + M M P
Sbjct: 634 LISFAQKYLIWECCPKWRKFKMALFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFD 693
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-G 121
+++ ++FT +T E A K++A + + Y + WN D +++ ++ + + G
Sbjct: 694 AMLQAGNIVFTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSASKKG 749
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+L+ LRTFR+LR K P L T++ + SV L ++ + + +FAL+G Q
Sbjct: 750 SLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
>UNIPROTKB|E1BXV5 [details] [associations]
symbol:Gga.561 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 EMBL:AADN02000266 EMBL:AADN02000267
IPI:IPI00821153 Ensembl:ENSGALT00000038879 ArrayExpress:E1BXV5
Uniprot:E1BXV5
Length = 1710
Score = 549 (198.3 bits), Expect = 1.4e-51, P = 1.4e-51
Identities = 110/187 (58%), Positives = 141/187 (75%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG 61
F+V++K K IFRF+AT ALW+L PF+PIRR AI I +H LF+ FII TI+TNC+ M
Sbjct: 87 FIVLNKQKTIFRFTATRALWILSPFHPIRRAAIKISIHSLFTWFIICTIITNCVFMAQNE 146
Query: 62 TPTIES------TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ S E FTGIYTFES +K++ARGF L FT+LRD WNWLDF VI +A+V
Sbjct: 147 SSRSSSPSWNRYVEFTFTGIYTFESLIKILARGFCLNEFTFLRDPWNWLDFSVIIMAFVG 206
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+LG+++ LRTFRVLRALKT+++VPGLK IVGA+I+SVK L +V+ILT+F LSVFAL+
Sbjct: 207 AFSNLGSVSVLRTFRVLRALKTISVVPGLKIIVGALIQSVKKLANVMILTVFCLSVFALI 266
Query: 176 GLQDSRG 182
GLQ +G
Sbjct: 267 GLQLFKG 273
Score = 172 (65.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 42/165 (25%), Positives = 88/165 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-----TIEST----EVIFTGIYTFE 79
+R+ I+ H F FI+ IL + ++ TI++ + +FT ++ E
Sbjct: 993 LRKTCYQIVEHSWFESFIVFMILLSSGVLAFEDIHINERRTIKAILSFLDRLFTFVFFLE 1052
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGNLAALRTFRVLRALKTV 138
+K +A GF Y +AW WLDF+++ ++ + +G L + +LRT R LR L+ +
Sbjct: 1053 MILKWVAYGFN----KYFTNAWCWLDFLIVGVSLINILGSSLDGVKSLRTLRALRPLRAL 1108
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1109 SRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1153
Score = 134 (52.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/152 (23%), Positives = 73/152 (48%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIF-TG--IYTFESAVKVMA 86
++VA +I P L I I+ N + M + E+ +++ G + F + +++
Sbjct: 564 KKVAAFIK-DPFIDLTITLCIVMNTLFMALEHNNMTENFKLMLKVGNLVSEFSTTAEMVL 622
Query: 87 RGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKT 146
+ L+ + Y + WN D I++ L+ + LR+FR+LR K P L T
Sbjct: 623 KIIALDPYYYFQQPWNIFDSIIVTLSLIETKRQKRKAKILRSFRLLRVFKLAKSWPTLNT 682
Query: 147 IVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 683 LIKIIGNSLGALSNLTLVLAIIVFIFAIVGVQ 714
>UNIPROTKB|E1C4C2 [details] [associations]
symbol:Gga.561 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 EMBL:AADN02000266
EMBL:AADN02000267 IPI:IPI00586181 Ensembl:ENSGALT00000009797
ArrayExpress:E1C4C2 Uniprot:E1C4C2
Length = 1760
Score = 549 (198.3 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 110/187 (58%), Positives = 141/187 (75%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG 61
F+V++K K IFRF+AT ALW+L PF+PIRR AI I +H LF+ FII TI+TNC+ M
Sbjct: 87 FIVLNKQKTIFRFTATRALWILSPFHPIRRAAIKISIHSLFTWFIICTIITNCVFMAQNE 146
Query: 62 TPTIES------TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ S E FTGIYTFES +K++ARGF L FT+LRD WNWLDF VI +A+V
Sbjct: 147 SSRSSSPSWNRYVEFTFTGIYTFESLIKILARGFCLNEFTFLRDPWNWLDFSVIIMAFVG 206
Query: 116 MGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM 175
+LG+++ LRTFRVLRALKT+++VPGLK IVGA+I+SVK L +V+ILT+F LSVFAL+
Sbjct: 207 AFSNLGSVSVLRTFRVLRALKTISVVPGLKIIVGALIQSVKKLANVMILTVFCLSVFALI 266
Query: 176 GLQDSRG 182
GLQ +G
Sbjct: 267 GLQLFKG 273
Score = 172 (65.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 42/165 (25%), Positives = 88/165 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-----TIEST----EVIFTGIYTFE 79
+R+ I+ H F FI+ IL + ++ TI++ + +FT ++ E
Sbjct: 1001 LRKTCYQIVEHSWFESFIVFMILLSSGVLAFEDIHINERRTIKAILSFLDRLFTFVFFLE 1060
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGNLAALRTFRVLRALKTV 138
+K +A GF Y +AW WLDF+++ ++ + +G L + +LRT R LR L+ +
Sbjct: 1061 MILKWVAYGFN----KYFTNAWCWLDFLIVGVSLINILGSSLDGVKSLRTLRALRPLRAL 1116
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1117 SRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1161
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/170 (24%), Positives = 83/170 (48%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFTGIYTF 78
A ++ DPF + + + I+++ LF + N LM+ G ++ST + T
Sbjct: 590 AAFIKDPFIDLT-ITLCIVMNTLFMALEHNNMTENFKLMLKVGN-LVKST------LETA 641
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL----------GNLAALRT 128
E +K++A L+ + Y + WN D I++ L+ + + + G L+ LR+
Sbjct: 642 EMVLKIIA----LDPYYYFQQPWNIFDSIIVTLSLIELSLPRQRGKKERRKGGTLSVLRS 697
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
FR+LR K P L T++ + S+ L ++ ++ + +FA++G+Q
Sbjct: 698 FRLLRVFKLAKSWPTLNTLIKIIGNSLGALSNLTLVLAIIVFIFAIVGVQ 747
>MGI|MGI:108029 [details] [associations]
symbol:Scn10a "sodium channel, voltage-gated, type X, alpha"
species:10090 "Mus musculus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=ISO] [GO:0002027 "regulation of heart
rate" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=ISO;IDA] [GO:0005272 "sodium channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006814 "sodium ion transport" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISO] [GO:0019233 "sensory perception of pain"
evidence=ISO] [GO:0030424 "axon" evidence=IDA] [GO:0034220 "ion
transmembrane transport" evidence=IEA] [GO:0034765 "regulation of
ion transmembrane transport" evidence=IEA;ISO] [GO:0035725 "sodium
ion transmembrane transport" evidence=IEA;ISO;IDA] [GO:0044299
"C-fiber" evidence=IDA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0055117 "regulation of cardiac muscle
contraction" evidence=ISO] [GO:0060371 "regulation of atrial
cardiac muscle cell membrane depolarization" evidence=ISO;IMP]
[GO:0061337 "cardiac conduction" evidence=IMP] [GO:0071439
"clathrin complex" evidence=ISO] [GO:0086067 "AV node cell to
bundle of His cell communication" evidence=ISO] [GO:0086069 "bundle
of His cell to Purkinje myocyte communication" evidence=ISO]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 MGI:MGI:108029 GO:GO:0005886
GO:GO:0005248 eggNOG:COG1226 GO:GO:0060371 GO:GO:0061337
GO:GO:0044299 HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
CTD:6336 KO:K04842 OrthoDB:EOG4229HT EMBL:AJ622906 EMBL:AJ623269
EMBL:AJ623270 EMBL:L42342 EMBL:AY538273 IPI:IPI00137606
IPI:IPI00515352 IPI:IPI00620090 RefSeq:NP_033160.2
UniGene:Mm.247042 ProteinModelPortal:Q6QIY3 SMR:Q6QIY3
STRING:Q6QIY3 PhosphoSite:Q6QIY3 PaxDb:Q6QIY3 PRIDE:Q6QIY3
GeneID:20264 KEGG:mmu:20264 UCSC:uc009sbf.1 UCSC:uc009sbg.2
UCSC:uc009sbh.2 InParanoid:Q6QIY3 BindingDB:Q6QIY3
ChEMBL:CHEMBL5158 NextBio:297931 Bgee:Q6QIY3 CleanEx:MM_SCN10A
Genevestigator:Q6QIY3 GermOnline:ENSMUSG00000034533 Uniprot:Q6QIY3
Length = 1958
Score = 548 (198.0 bits), Expect = 2.3e-51, P = 2.3e-51
Identities = 110/182 (60%), Positives = 132/182 (72%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ K + I RFSAT ALW+ PFN IRR AI + VH FS+FI TIL NC+ M
Sbjct: 91 TFIVLDKSRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILVNCVCMTRT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P E E FT +YTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL
Sbjct: 151 DLP--EKLEYAFTVVYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 180 (68.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/172 (27%), Positives = 91/172 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT-----PTIES----TEVIFTGIYTFE 79
+R+ I+ H F FII IL + + P ++S T+ +FT I+ FE
Sbjct: 1142 VRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFE 1201
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ ++ D+ ++ ALRT R LR
Sbjct: 1202 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALR 1257
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK S
Sbjct: 1258 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFS 1309
Score = 160 (61.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 42/168 (25%), Positives = 79/168 (47%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVI 71
+W P + + V ++ P L I I+ N + M M P +++ ++
Sbjct: 643 IWECCPKWKKFKMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAFDAMLQAGNIV 702
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFR 130
FT +T E A K++A + + Y + WN D +++ ++ + + G+L+ LRTFR
Sbjct: 703 FTVFFTMEMAFKIIA----FDPYYYFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTFR 758
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ + + +FAL+G Q
Sbjct: 759 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTFILAIIVFIFALVGKQ 806
>UNIPROTKB|E2QUG1 [details] [associations]
symbol:SCN10A "Sodium channel protein type 10 subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0005248
"voltage-gated sodium channel activity" evidence=IEA] [GO:0001518
"voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00650000092939
OMA:CCPTWVK EMBL:AAEX03013493 Ensembl:ENSCAFT00000012349
Uniprot:E2QUG1
Length = 1962
Score = 534 (193.0 bits), Expect = 7.1e-50, P = 7.1e-50
Identities = 108/182 (59%), Positives = 131/182 (71%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLDKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVGMTQT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P + E +FT IYTFE+ +K++ARGF L F YLRD WNWLDF VI LAY+ L
Sbjct: 151 ELP--DRIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWNWLDFSVITLAYIGEATAL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 178 (67.7 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 46/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ E
Sbjct: 1148 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYHLDQKPTVKALLEYTDRMFTFIFVLE 1207
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ D+ ++ ALRT R LR
Sbjct: 1208 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLIAKILQYSDVASIKALRTLRALR 1263
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1264 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGK 1313
Score = 166 (63.5 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 14 FSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--GTPT-----I 65
F+ +W P + ++ V I+ P L I I+ N + M M G + +
Sbjct: 647 FAQKYLIWECCPTWVKLKTVLFGIVTDPFAELTITLCIVVNTVFMAMEHHGMSSAFEAML 706
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLA 124
+ ++FT +T E K++A + + Y + WN D I++ ++ + +G G+L+
Sbjct: 707 QIGNIVFTVFFTAEMVFKIIA----FDPYYYFQKRWNIFDCIIVTVSLIELGAARKGSLS 762
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFR+LR K P L T++ + SV L ++ I+ + VFAL+G Q
Sbjct: 763 VLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 816
>UNIPROTKB|O46669 [details] [associations]
symbol:SCN10A "Sodium channel protein type 10 subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0005248
"voltage-gated sodium channel activity" evidence=IEA] [GO:0001518
"voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50096
GO:GO:0035725 GO:GO:0005248 eggNOG:COG1226 HOGENOM:HOG000231755
GO:GO:0001518 HOVERGEN:HBG053100 EMBL:U60590 RefSeq:NP_001003203.1
UniGene:Cfa.3714 ProteinModelPortal:O46669 PRIDE:O46669
GeneID:477026 KEGG:cfa:477026 CTD:6336 KO:K04842 NextBio:20852577
Uniprot:O46669
Length = 1962
Score = 529 (191.3 bits), Expect = 2.4e-49, P = 2.4e-49
Identities = 107/182 (58%), Positives = 131/182 (71%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+ KG+ I RFSAT ALW+ PFN IRR AI + VH FSLFI TIL NC+ M
Sbjct: 91 TFMVLDKGRTISRFSATRALWLFSPFNLIRRTAIKVSVHSWFSLFITVTILVNCVGMTQT 150
Query: 61 GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
P + E +FT IYTFE+ +K++ARGF L F YLRD W+WLDF VI LAY+ L
Sbjct: 151 ELP--DRIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWDWLDFSVITLAYIGEATAL 208
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
++ LRTFRVLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ
Sbjct: 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLF 268
Query: 181 RG 182
+G
Sbjct: 269 KG 270
Score = 175 (66.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + PT+ E T+ +FT I+ E
Sbjct: 1148 VRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYHLDQKPTVKALLEYTDRMFTFIFVLE 1207
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ +++ D+ ++ ALRT R LR
Sbjct: 1208 MLLKWVAYGFK----KYFTNAWCWLDFLIVNISLISLIAKILQYSDVASIKALRTLRALR 1263
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F+ MG+ GK
Sbjct: 1264 PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSTMGVNFFAGK 1313
Score = 161 (61.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 47/174 (27%), Positives = 83/174 (47%)
Query: 14 FSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--GTPT-----I 65
F+ +W P + ++ V I+ P L I+ N + M M G + +
Sbjct: 647 FAQKYLIWECCPTWVKLKTVLFGIVTDPFAELTTTLCIVVNTVFMAMEHHGMSSAFEAML 706
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLA 124
+ ++FT +T E K++A + + Y + WN D I++ ++ + +G G+L+
Sbjct: 707 QIGNIVFTVFFTAEMVFKIIA----FDPYYYFQKRWNIFDCIIVTVSLIELGAARKGSLS 762
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LRTFR+LR K P L T++ + SV L ++ I+ + VFAL+G Q
Sbjct: 763 VLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQ 816
>MGI|MGI:1345149 [details] [associations]
symbol:Scn11a "sodium channel, voltage-gated, type XI,
alpha" species:10090 "Mus musculus" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] [GO:0005248 "voltage-gated sodium channel
activity" evidence=IDA] [GO:0005272 "sodium channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006814
"sodium ion transport" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=IEA] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0035725 "sodium ion
transmembrane transport" evidence=IEA;IDA] [GO:0044299 "C-fiber"
evidence=IDA] [GO:0055085 "transmembrane transport" evidence=IEA]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 MGI:MGI:1345149
GO:GO:0005886 GO:GO:0005248 eggNOG:COG1226 GO:GO:0044299
HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
GeneTree:ENSGT00650000092939 CTD:11280 KO:K04843 OMA:ERCLPKG
OrthoDB:EOG41RPT1 EMBL:AF118044 EMBL:AB031389 EMBL:AC124662
EMBL:AC162937 IPI:IPI00126898 RefSeq:NP_036017.3 UniGene:Mm.89981
ProteinModelPortal:Q9R053 SMR:Q9R053 STRING:Q9R053
PhosphoSite:Q9R053 PaxDb:Q9R053 PRIDE:Q9R053
Ensembl:ENSMUST00000070617 GeneID:24046 KEGG:mmu:24046
UCSC:uc009sbk.1 InParanoid:Q9R053 ChiTaRS:SCN11A NextBio:303975
Bgee:Q9R053 CleanEx:MM_SCN11A Genevestigator:Q9R053
GermOnline:ENSMUSG00000034115 Uniprot:Q9R053
Length = 1765
Score = 493 (178.6 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 97/184 (52%), Positives = 134/184 (72%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI-- 58
TF+V++K + I+RFSA AL++L PFNPIR I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSFMIRISVHSVFSMFIICTVIINCMFMANN 149
Query: 59 --MPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYV 114
+ P+ E +F GIY E+ +K++ARGFI++ F+YLRD WNWLDFIVI A+A
Sbjct: 150 SSVDSRPSSNIPEYVFIGIYVLEAVIKILARGFIVDEFSYLRDPWNWLDFIVIGTAIAPC 209
Query: 115 TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
+G + NL+ LRTFRVLRALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL
Sbjct: 210 FLGNKVNNLSTLRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFAL 269
Query: 175 MGLQ 178
+G Q
Sbjct: 270 VGQQ 273
Score = 193 (73.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 51/172 (29%), Positives = 92/172 (53%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVI 71
WVL +N +R+ I+ H F FII IL + +I +P P +E T+ I
Sbjct: 1018 WVLW-WN-LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLKCTDNI 1075
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FT I+ E +K +A GF Y AW WLDF+++ ++ +++ +L NL + R R
Sbjct: 1076 FTFIFLLEMILKWVAFGFR----KYFTSAWCWLDFLIVVVSGLSL-TNLPNLKSFRNLRA 1130
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A++ ++ + +V+++ + +F ++G+ GK
Sbjct: 1131 LRPLRALSQFEGMKVVVNALMSAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1182
Score = 140 (54.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P+ I++V I+ P L I I+ N + + M S + I FTGI+
Sbjct: 560 PWLCIKKVLQTIMTDPFTELAITICIIVNTVFLAMEHHNMDNSLKDILKIGNWVFTGIFI 619
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMGIDLGNLAALRTFRVLRAL 135
E +K++A L+ + Y R WN D IV ++LA V NL+ L + RVLR
Sbjct: 620 AEMCLKIIA----LDPYHYFRHGWNIFDSIVALVSLADVLFHKLSKNLSFLASLRVLRVF 675
Query: 136 KTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 676 KLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 718
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/169 (23%), Positives = 82/169 (48%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--GTPT-----IESTEVIFTGIYT 77
P N + ++ +F + I+ I+TN I+M+ G P + ++F I+T
Sbjct: 1332 PLNKCQAFVFDLVTSQVFDVIILGLIVTNMIIMMAESEGQPNEVKKIFDILNIVFVVIFT 1391
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLGNLAALRTFRVLRA 134
E +KV F L Y + WN D +V+ L+ ++ G++ N+ FR++R
Sbjct: 1392 VECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSGLENSNVFPPTLFRIVRL 1446
Query: 135 ------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1447 ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1495
>RGD|3630 [details] [associations]
symbol:Scn11a "sodium channel, voltage-gated, type XI, alpha
subunit" species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006814 "sodium ion transport" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0035725 "sodium ion transmembrane transport"
evidence=ISO] [GO:0044299 "C-fiber" evidence=ISO] InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 RGD:3630 GO:GO:0035725 GO:GO:0005248 eggNOG:COG1226
GO:GO:0044299 HOGENOM:HOG000231755 GO:GO:0001518 HOVERGEN:HBG053100
CTD:11280 KO:K04843 OrthoDB:EOG41RPT1 EMBL:AF059030 EMBL:AJ237852
IPI:IPI00392165 PIR:T42388 RefSeq:NP_062138.1 UniGene:Rn.30023
ProteinModelPortal:O88457 STRING:O88457 PhosphoSite:O88457
PRIDE:O88457 GeneID:29701 KEGG:rno:29701 UCSC:RGD:3630
InParanoid:O88457 BindingDB:O88457 ChEMBL:CHEMBL2629 NextBio:610107
ArrayExpress:O88457 Genevestigator:O88457
GermOnline:ENSRNOG00000032884 Uniprot:O88457
Length = 1765
Score = 477 (173.0 bits), Expect = 7.0e-44, P = 7.0e-44
Identities = 94/182 (51%), Positives = 133/182 (73%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNP+R + I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPLRSLMIRISVHSVFSMFIICTVIINCMFMANS 149
Query: 61 GTPTIEST--EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
+ ++ E +F GIY E+ +K++ARGFI++ F++LRD WNWLDFIVI A T
Sbjct: 150 MERSFDNDIPEYVFIGIYILEAVIKILARGFIVDEFSFLRDPWNWLDFIVIGTAIATCFP 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
G + NL+ALRTFRV RALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL+G
Sbjct: 210 GSQV-NLSALRTFRVFRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFALVG 268
Query: 177 LQ 178
Q
Sbjct: 269 QQ 270
Score = 199 (75.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 54/172 (31%), Positives = 94/172 (54%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVI 71
WVL +N IR+ I+ H F FII IL + +I +P P +E T+ I
Sbjct: 1017 WVLW-WN-IRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLRCTDNI 1074
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FT I+ E +K +A GF Y AW WLDF+++ ++ +++ ++L +L + RT R
Sbjct: 1075 FTFIFLLEMILKWVAFGFR----RYFTSAWCWLDFLIVVVSVLSL-MNLPSLKSFRTLRA 1129
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1130 LRPLRALSQFEGMKVVVYALISAIPAILNVLLVCLIFWLVFCILGVNLFSGK 1181
Score = 130 (50.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI------- 71
+W P + I++V I+ P L I I+ N + + + ++ + I
Sbjct: 551 VWDCSPQWLCIKKVLRTIMTDPFTELAITICIIINTVFLAVEHHNMDDNLKTILKIGNWV 610
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMG-IDLGNLAALRT 128
FTGI+ E +K++A L+ + Y R WN D IV ++LA V + N + L +
Sbjct: 611 FTGIFIAEMCLKIIA----LDPYHYFRHGWNVFDSIVALLSLADVLYNTLSDNNRSFLAS 666
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLR K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 667 LRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 716
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 43/184 (23%), Positives = 83/184 (45%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT--P-----TIESTEVIFTGIYT 77
P N + ++ +F + I+ I+ N I+M+ P T + + F I+T
Sbjct: 1331 PLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAESADQPKDVKKTFDILNIAFVVIFT 1390
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAAL----R 127
E +KV F L Y + WN D +V+ L+ ++ + D+ L R
Sbjct: 1391 IECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSRLEDSDISFPPTLFRVVR 1445
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ-DSRGKKSD 186
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+ S+ KK
Sbjct: 1446 LARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMSWFSKVKKGS 1505
Query: 187 ESHD 190
D
Sbjct: 1506 GIDD 1509
>UNIPROTKB|F1M9X1 [details] [associations]
symbol:Scn11a "Sodium channel protein type 11 subunit
alpha" species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0044299 "C-fiber"
evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
RGD:3630 GO:GO:0035725 GO:GO:0005248 GO:GO:0044299 GO:GO:0001518
GeneTree:ENSGT00650000092939 IPI:IPI00392165
Ensembl:ENSRNOT00000034025 ArrayExpress:F1M9X1 Uniprot:F1M9X1
Length = 1765
Score = 477 (173.0 bits), Expect = 7.0e-44, P = 7.0e-44
Identities = 94/182 (51%), Positives = 133/182 (73%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFNP+R + I I VH +FS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPLRSLMIRISVHSVFSMFIICTVIINCMFMANS 149
Query: 61 GTPTIEST--EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-- 116
+ ++ E +F GIY E+ +K++ARGFI++ F++LRD WNWLDFIVI A T
Sbjct: 150 MERSFDNDIPEYVFIGIYILEAVIKILARGFIVDEFSFLRDPWNWLDFIVIGTAIATCFP 209
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
G + NL+ALRTFRV RALK ++++ GLK IVGA++ SVK L DV++LT+F LS+FAL+G
Sbjct: 210 GSQV-NLSALRTFRVFRALKAISVISGLKVIVGALLRSVKKLVDVMVLTLFCLSIFALVG 268
Query: 177 LQ 178
Q
Sbjct: 269 QQ 270
Score = 199 (75.1 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 54/172 (31%), Positives = 94/172 (54%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVI 71
WVL +N IR+ I+ H F FII IL + +I +P P +E T+ I
Sbjct: 1017 WVLW-WN-IRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVNLPSRPQVEKLLRCTDNI 1074
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FT I+ E +K +A GF Y AW WLDF+++ ++ +++ ++L +L + RT R
Sbjct: 1075 FTFIFLLEMILKWVAFGFR----RYFTSAWCWLDFLIVVVSVLSL-MNLPSLKSFRTLRA 1129
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1130 LRPLRALSQFEGMKVVVYALISAIPAILNVLLVCLIFWLVFCILGVNLFSGK 1181
Score = 130 (50.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI------- 71
+W P + I++V I+ P L I I+ N + + + ++ + I
Sbjct: 551 VWDCSPQWLCIKKVLRTIMTDPFTELAITICIIINTVFLAVEHHNMDDNLKTILKIGNWV 610
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMG-IDLGNLAALRT 128
FTGI+ E +K++A L+ + Y R WN D IV ++LA V + N + L +
Sbjct: 611 FTGIFIAEMCLKIIA----LDPYHYFRHGWNVFDSIVALLSLADVLYNTLSDNNRSFLAS 666
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLR K P L T++ + SV L ++ ++ + +F+++G++
Sbjct: 667 LRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLTIVVFIFSVVGMR 716
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 43/184 (23%), Positives = 83/184 (45%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGT--P-----TIESTEVIFTGIYT 77
P N + ++ +F + I+ I+ N I+M+ P T + + F I+T
Sbjct: 1331 PLNKCQAFVFDLVTSQVFDVIILGLIVLNMIIMMAESADQPKDVKKTFDILNIAFVVIFT 1390
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------DLGNLAAL----R 127
E +KV F L Y + WN D +V+ L+ ++ + D+ L R
Sbjct: 1391 IECLIKV----FALRQH-YFTNGWNLFDCVVVVLSIISTLVSRLEDSDISFPPTLFRVVR 1445
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ-DSRGKKSD 186
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+ S+ KK
Sbjct: 1446 LARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMSWFSKVKKGS 1505
Query: 187 ESHD 190
D
Sbjct: 1506 GIDD 1509
>UNIPROTKB|J9PAI1 [details] [associations]
symbol:SCN11A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00650000092939 OMA:ERCLPKG EMBL:AAEX03013493
EMBL:AAEX03013494 Ensembl:ENSCAFT00000047954 Uniprot:J9PAI1
Length = 1777
Score = 475 (172.3 bits), Expect = 1.2e-43, P = 1.2e-43
Identities = 101/192 (52%), Positives = 138/192 (71%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHP---LFSLFIITTILTNCILM 57
TF+V++K + I+RFSA AL++L PFNPIR +AI I VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNPIRSLAIKISVHSSITLFSMFIICTVIINCVFM 149
Query: 58 IMP------GTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
T T ++ E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI
Sbjct: 150 ATAHGKDKNNTDT-DNAEYVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIVT 208
Query: 112 AYVTMGID--LGN---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTM 166
A+V+ + L N +++LRTFRV RALK +++V GLK IVGA++ SVK L DV+ILT+
Sbjct: 209 AFVSYSPNTILNNSISMSSLRTFRVFRALKAISVVSGLKVIVGALLRSVKKLVDVMILTL 268
Query: 167 FSLSVFALMGLQ 178
F LS+FAL+G Q
Sbjct: 269 FCLSIFALVGQQ 280
Score = 188 (71.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 52/172 (30%), Positives = 90/172 (52%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVI 71
W++ +N +R+ I+ H F FII IL + ++ + P I T+ I
Sbjct: 1029 WIIW-WN-LRKTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLEERPNIRDLLNCTDHI 1086
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FT I+ E +K +A GF Y W WLDFI++ ++ VT IDL +L + RT R
Sbjct: 1087 FTYIFILEMGLKWVAFGF----GKYFTSVWCWLDFIIVIVS-VTSLIDLKSLKSFRTLRA 1141
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A+I ++ + +V+++ + +F ++G+ GK
Sbjct: 1142 LRPLRALSQFQGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGK 1193
Score = 144 (55.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 20 LWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VI 71
+W P + I++ ++ P L I I+ N + + M +S E ++
Sbjct: 563 VWNCSPRWLCIKKALRTVMTDPFTELAITVCIIINTVFLAMEHYKMDQSFESILYTGNLV 622
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL--GNLA--ALR 127
FTGI+ E +K++A L+ + Y R WN D IV L++V + I++ G
Sbjct: 623 FTGIFMAEMCLKIIA----LDPYNYFRRGWNIFDSIVALLSFVDVMINIIVGKQCPRVFH 678
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ RVLR K P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 679 SLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 729
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 40/171 (23%), Positives = 80/171 (46%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVI-------FTGIYT 77
P N + + ++ + +F + II I N + M+ +++T+ I F I+T
Sbjct: 1343 PLNKCQGLMYDLVTNQVFDVIIIILIFLNMLSMMAESENQLDTTKFILDRLNLAFVVIFT 1402
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN----------LAAL 126
E +K+ F L + Y WN D +++ L+ V TM L N +
Sbjct: 1403 IECLIKI----FALRQY-YFTIGWNLFDCVIVVLSIVSTMVSALENQEHIPFPPTLFRIV 1457
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1458 RLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGM 1508
>FB|FBgn0085434 [details] [associations]
symbol:NaCP60E "Na channel protein 60E" species:7227
"Drosophila melanogaster" [GO:0042048 "olfactory behavior"
evidence=IMP] [GO:0005248 "voltage-gated sodium channel activity"
evidence=ISS;NAS] [GO:0006814 "sodium ion transport"
evidence=IEA;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0001518
"voltage-gated sodium channel complex" evidence=IEA] [GO:0022843
"voltage-gated cation channel activity" evidence=IDA]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PROSITE:PS50096 EMBL:AE013599 GO:GO:0005886 GO:GO:0007608
GO:GO:0042048 GO:GO:0005248 eggNOG:COG1226 GO:GO:0001518
EMBL:DQ466888 EMBL:X14394 EMBL:X14395 EMBL:X14396 EMBL:X14397
EMBL:X14398 EMBL:AY060357 EMBL:X84409 PIR:S04029
RefSeq:NP_001189007.2 RefSeq:NP_726495.3 ProteinModelPortal:Q9W0Y8
SMR:Q9W0Y8 MINT:MINT-282473 GeneID:37981 KEGG:dme:Dmel_CG34405
CTD:37981 FlyBase:FBgn0085434 InParanoid:Q9W0Y8 OrthoDB:EOG4CRJDT
PhylomeDB:Q9W0Y8 ChiTaRS:NaCP60E GenomeRNAi:37981 NextBio:806360
Uniprot:Q9W0Y8
Length = 2821
Score = 477 (173.0 bits), Expect = 1.4e-43, P = 1.4e-43
Identities = 95/186 (51%), Positives = 131/186 (70%)
Query: 1 TFVVVSKG--KD-IFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM 57
TF VVSK K+ I RF+ T +L++ P++P RRV +YI + F ++ TIL NCI +
Sbjct: 84 TFCVVSKRFRKNYIHRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFL 143
Query: 58 IMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M T T+E E IF IY+ E +K++A+GF+L +TYLR+ WNWLDF+VI Y T+G
Sbjct: 144 AM--TETVEEAEYIFLAIYSIEMVIKIIAKGFLLNKYTYLRNPWNWLDFVVITSGYATIG 201
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+++GNLA LRTFRVLRALKTV+I+PGLKTI+ A++ S + L +V+ LT+F L VFAL L
Sbjct: 202 MEVGNLAGLRTFRVLRALKTVSIMPGLKTIINALLHSFRQLAEVMTLTIFCLMVFALFAL 261
Query: 178 QDSRGK 183
Q G+
Sbjct: 262 QVYMGE 267
Score = 141 (54.7 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 44/154 (28%), Positives = 80/154 (51%)
Query: 34 IYILVH-PLFSLFIITTILTNCILMIMPGTPTIES----TEV---IFTGIYTFESAVKVM 85
+Y +V PLF L I I+ N + M ES +V +FT I+TFE VK+M
Sbjct: 681 LYKVVRDPLFELAITLCIVLNTAFLAMEHHGMSESFRNALDVGNKVFTSIFTFECIVKLM 740
Query: 86 ARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-GNLAALRTFRVLRALKTVAIVPGL 144
A + + F +L WN D +++ + + + +L L+ LR R+LR LK +
Sbjct: 741 A---LSKDF-FLC-GWNIFDLLIVTASLLDIIFELVDGLSVLRGLRLLRVLKLAQSWTTM 795
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
K ++ +I ++ L ++ ++ + + +FA++G+Q
Sbjct: 796 KVLLSIIISTIGALGNLTLILVIVIYIFAVIGMQ 829
Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 40/168 (23%), Positives = 83/168 (49%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIEST----EVIFTGIYTFE 79
+R + ++ P F F++ I + I + + T++ F I+ E
Sbjct: 1717 VRTAVLTVVDTPAFEWFVLVLIFASSITLCFEDINLDKNKTLKRVLYWINFSFCLIFVVE 1776
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG-NLAALRTFRVLRALKTV 138
+K +A GF Y W LDFI++ ++ ++ I+ NL LR+ R LRAL+ +
Sbjct: 1777 MILKWLALGFS----KYFTSFWTILDFIIVFVSVFSLLIEENENLKVLRSLRTLRALRPL 1832
Query: 139 AIVP---GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ G++ +V A++ ++ ++ +V+++ + +F++MG+Q GK
Sbjct: 1833 RAISRWQGMRIVVNALMYAIPSIFNVLLVCLVFWLIFSIMGVQFFGGK 1880
>UNIPROTKB|E1BHM6 [details] [associations]
symbol:SCN11A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0044299 "C-fiber" evidence=IEA] [GO:0005248
"voltage-gated sodium channel activity" evidence=IEA] [GO:0001518
"voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 GO:GO:0035725
GO:GO:0005248 GO:GO:0044299 GO:GO:0001518
GeneTree:ENSGT00650000092939 CTD:11280 KO:K04843 OMA:ERCLPKG
EMBL:DAAA02053657 EMBL:DAAA02053658 IPI:IPI00839866
RefSeq:XP_002696965.1 RefSeq:XP_003583836.1
Ensembl:ENSBTAT00000022822 GeneID:535956 KEGG:bta:535956
NextBio:20876863 Uniprot:E1BHM6
Length = 1783
Score = 472 (171.2 bits), Expect = 2.4e-43, P = 2.4e-43
Identities = 96/187 (51%), Positives = 134/187 (71%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + I+RFSA AL++L PFN IR +AI I VH LFS+FII T++ NC+ M +
Sbjct: 90 TFMVLNKKRTIYRFSAKRALFILGPFNSIRSLAIRISVHSLFSMFIICTVIINCVFMALA 149
Query: 61 GTPT-----IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
+ + E +F GIY FE+ VK++ARGFIL+ F++LRD WNWLD IVIA A+V+
Sbjct: 150 HQKSSIDVKTDHAEYVFLGIYLFEALVKILARGFILDEFSFLRDPWNWLDSIVIATAFVS 209
Query: 116 MGIDLGN----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSV 171
+ + L++LRTFRV RALK ++++ GLK IVGA++ SVK L DV+IL +F LS+
Sbjct: 210 YSPYINDSSFSLSSLRTFRVFRALKAISVISGLKVIVGALLHSVKKLVDVMILALFCLSI 269
Query: 172 FALMGLQ 178
FAL+G Q
Sbjct: 270 FALVGQQ 276
Score = 178 (67.7 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 47/164 (28%), Positives = 85/164 (51%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVIFTGIYTFE 79
+R++ I+ H F FII IL + ++ + P I+ T+ IFT I+ E
Sbjct: 1041 LRKICYQIVKHSWFESFIIFVILLSSGALVFEDINLDKQPKIQELLKCTDTIFTYIFILE 1100
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVA 139
+K +A GF Y W WLDF+++ ++ VT IDL L + R R LR L+ ++
Sbjct: 1101 MGLKWVAFGFR----KYFTSVWCWLDFVIVIVS-VTSLIDLMGLKSFRILRALRPLRALS 1155
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
G+K +V A+I ++ + +V+++ + +F ++G+ G+
Sbjct: 1156 QFEGMKVVVYALIGAIPAILNVLLVCLIFWLIFCILGVSLFSGR 1199
Score = 140 (54.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 46/169 (27%), Positives = 83/169 (49%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFT 73
W LD I++V ++ P L I I+ N + + M ++ E ++FT
Sbjct: 564 WWLD----IKKVLRTVMTDPFTELAITICIIINTVFLAMEHYKMDQNFENILYTGNLVFT 619
Query: 74 GIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV--IALAYVTMG-IDLG-NLAALRTF 129
GI+ E +K++A L+ + Y R WN D +V ++LA V + I G + + R+
Sbjct: 620 GIFMAEMCLKIIA----LDPYHYFRRGWNIFDSVVALLSLADVILNHIVSGKSWISFRSL 675
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RVLR K P L T++ + SV L ++ ++ + +F+++G+Q
Sbjct: 676 RVLRVFKLAKSWPTLSTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGMQ 724
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 41/184 (22%), Positives = 82/184 (44%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG---TPT----IESTEVIFTGIYT 77
P N + ++ H +F + II IL N + M+ + T +ES + F I+
Sbjct: 1349 PQNKCQGFVFDLVTHQVFDIIIIILILLNMLSMMAETHKQSETMKHLLESLNMAFVVIFA 1408
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA-----------L 126
E +K+ F L + Y + WN D +++ L+ V+ + A +
Sbjct: 1409 IECFIKI----FALRQY-YFANGWNLFDCVIVLLSIVSSVVSALKTQAQIPFPPTLFRMV 1463
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSD 186
R R+ R L+ V ++T++ A++ S+ +L ++ +L + ++A+ G+ R K +
Sbjct: 1464 RLVRIGRILRLVRAARRIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNSFRKVKEE 1523
Query: 187 ESHD 190
D
Sbjct: 1524 SGID 1527
>UNIPROTKB|J9P3E2 [details] [associations]
symbol:SCN1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008051 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01664
SMART:SM00015 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
EMBL:AAEX03017732 Ensembl:ENSCAFT00000045506 Uniprot:J9P3E2
Length = 1867
Score = 469 (170.2 bits), Expect = 5.4e-43, P = 5.4e-43
Identities = 90/136 (66%), Positives = 111/136 (81%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 185 (70.2 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 45/176 (25%), Positives = 90/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++FS +W P+ ++ + +++ P L I I+ N + M M P E
Sbjct: 597 YKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEHFNN 656
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D ++ L+ V +G+ ++
Sbjct: 657 VLTVGNLVFTGIFTAEMFLKIIA----MDPYYYFQEGWNIFDGFIVTLSLVELGLANVEG 712
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 713 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 768
Score = 175 (66.7 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1065 LRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILE 1124
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1125 MLLKWVAYGYQ----TYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR 1180
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1181 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1230
>UNIPROTKB|H7C064 [details] [associations]
symbol:SCN9A "Sodium channel protein type 9 subunit alpha"
species:9606 "Homo sapiens" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
InterPro:IPR024583 Pfam:PF11933 EMBL:AC074101 EMBL:AC107082
EMBL:AC108146 HGNC:HGNC:10597 ProteinModelPortal:H7C064
Ensembl:ENST00000452182 Bgee:H7C064 Uniprot:H7C064
Length = 539
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 88/130 (67%), Positives = 107/130 (82%)
Query: 50 ILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV 108
ILTNCI M M P ++ E FTGIYTFES VK++ARGF + FT+LRD WNWLDF+V
Sbjct: 1 ILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWNWLDFVV 60
Query: 109 IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
I AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F
Sbjct: 61 IVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFC 120
Query: 169 LSVFALMGLQ 178
LSVFAL+GLQ
Sbjct: 121 LSVFALIGLQ 130
>UNIPROTKB|J9NTZ6 [details] [associations]
symbol:SCN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
EMBL:AAEX03017727 Ensembl:ENSCAFT00000049158 Uniprot:J9NTZ6
Length = 1677
Score = 468 (169.8 bits), Expect = 5.9e-43, P = 5.9e-43
Identities = 89/136 (65%), Positives = 112/136 (82%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M + P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI +AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 188 (71.2 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 47/176 (26%), Positives = 93/176 (52%)
Query: 12 FRFSATDALW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM---PGTPTIES 67
+RF+ +W D + ++ + I++ P L I I+ N + M M P T S
Sbjct: 583 YRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTGQFSS 642
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++FTGI+T E +K++A ++ + Y ++ WN D I+++L+ + +G+ ++
Sbjct: 643 VLTVGNLVFTGIFTAEMVLKIIA----MDPYYYFQEGWNIFDGIIVSLSLMELGLANVEG 698
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 699 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 754
Score = 175 (66.7 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 47/170 (27%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGT--PTIESTEVIFTGIYTFE 79
+R+ I+ H F FI+ IL + I + T +E + +FT I+ E
Sbjct: 1047 LRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILE 1106
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF TY +AW WLDF+++ ++ V++ G +LG + +LRT R LR
Sbjct: 1107 MLLKWVAYGFQ----TYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALR 1162
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1163 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1212
>UNIPROTKB|F1RSK2 [details] [associations]
symbol:SCN4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 OMA:NACESEN
EMBL:CU466386 Ensembl:ENSSSCT00000018814 Uniprot:F1RSK2
Length = 1832
Score = 466 (169.1 bits), Expect = 1.1e-42, P = 1.1e-42
Identities = 99/181 (54%), Positives = 129/181 (71%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL+VL PF+ +RR AI +L+H ++FI+ TILTNC+ M M
Sbjct: 92 TFIVLNKGKAIFRFSATPALYVLSPFSVVRRSAIKVLIHSYPAMFIMITILTNCVFMTMS 151
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDA--WNWLDFIVIALAYVTMG 117
P+ ++ EV + A G L R + WNWLDF VI +AY+T
Sbjct: 152 DPPSWSKNVEVTLLLARSPHPPTPEAAGGGTLSLSLSARSSAPWNWLDFSVIMMAYLTEF 211
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+DLGN++ALRTFRVLRALKT+ ++PGLKTIVGA+I+SVK L DV+ILT+F LSVFAL+GL
Sbjct: 212 VDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALVGL 271
Query: 178 Q 178
Q
Sbjct: 272 Q 272
Score = 182 (69.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 45/168 (26%), Positives = 87/168 (51%)
Query: 20 LW-VLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VI 71
+W P+ +++ I++ P L I I+ N + M M P E + ++
Sbjct: 547 IWNCCGPWMKFKKIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFDAVLTVGNLV 606
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGNLAALRTFR 130
FTGI+T E +K++A ++ + Y + WN D I++ L+ V +G+ ++ L+ LR+FR
Sbjct: 607 FTGIFTAEMVLKLIA----MDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFR 662
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 663 LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 710
Score = 170 (64.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 43/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
+RR I+ H F FI+ IL + + +E + +FT ++ E
Sbjct: 1013 LRRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYVFIIE 1072
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 1073 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR 1128
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1129 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1178
>UNIPROTKB|Q9UI33 [details] [associations]
symbol:SCN11A "Sodium channel protein type 11 subunit
alpha" species:9606 "Homo sapiens" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0044299 "C-fiber"
evidence=IEA] [GO:0006814 "sodium ion transport" evidence=TAS]
[GO:0042493 "response to drug" evidence=TAS] InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 GO:GO:0042493 GO:GO:0005248 eggNOG:COG1226
DrugBank:DB00907 GO:GO:0044299 GO:GO:0001518 HOVERGEN:HBG053100
EMBL:AC116038 EMBL:AF188679 EMBL:AF109737 EMBL:AF150882
EMBL:AJ417790 EMBL:AY686224 IPI:IPI00296063 IPI:IPI00513973
IPI:IPI00514134 RefSeq:NP_054858.2 UniGene:Hs.591657
ProteinModelPortal:Q9UI33 SMR:Q9UI33 IntAct:Q9UI33 STRING:Q9UI33
TCDB:1.A.1.10.9 PhosphoSite:Q9UI33 DMDM:124053649 PaxDb:Q9UI33
PRIDE:Q9UI33 Ensembl:ENST00000302328 Ensembl:ENST00000444237
Ensembl:ENST00000450244 Ensembl:ENST00000456224 GeneID:11280
KEGG:hsa:11280 UCSC:uc021wvy.1 CTD:11280 GeneCards:GC03M038862
HGNC:HGNC:10583 HPA:HPA036746 MIM:604385 neXtProt:NX_Q9UI33
PharmGKB:PA35001 InParanoid:Q9UI33 KO:K04843 OMA:ERCLPKG
OrthoDB:EOG41RPT1 BindingDB:Q9UI33 ChEMBL:CHEMBL5167
GenomeRNAi:11280 NextBio:42941 Bgee:Q9UI33 CleanEx:HS_SCN11A
Genevestigator:Q9UI33 GermOnline:ENSG00000168356 Uniprot:Q9UI33
Length = 1791
Score = 462 (167.7 bits), Expect = 2.8e-42, P = 2.8e-42
Identities = 96/185 (51%), Positives = 131/185 (70%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM- 59
TF+V+++ + I+RFSA AL++ PFN IR +AI + VH LFS+FII T++ NC+ M
Sbjct: 90 TFMVLNRKRTIYRFSAKHALFIFGPFNSIRSLAIRVSVHSLFSMFIIGTVIINCVFMATG 149
Query: 60 PG----TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
P + + E +FTGIY FE+ +K++ARGFIL+ F++LRD WNWLD IVI +A V+
Sbjct: 150 PAKNSNSNNTDIAECVFTGIYIFEALIKILARGFILDEFSFLRDPWNWLDSIVIGIAIVS 209
Query: 116 M--GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
GI + L LRTFRV RALK +++V LK IVGA++ SVK L +VIILT F LS+FA
Sbjct: 210 YIPGITI-KLLPLRTFRVFRALKAISVVSRLKVIVGALLRSVKKLVNVIILTFFCLSIFA 268
Query: 174 LMGLQ 178
L+G Q
Sbjct: 269 LVGQQ 273
Score = 186 (70.5 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTIES----TEVI 71
WV+ +N +R+ I+ H F FII IL + +I + P I+ T++I
Sbjct: 1039 WVIW-WN-LRKTCYQIVKHSWFESFIIFVILLSSGALIFEDVHLENQPKIQELLNCTDII 1096
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FT I+ E +K +A GF Y AW LDFI++ ++ T+ I+L L + RT R
Sbjct: 1097 FTHIFILEMVLKWVAFGF----GKYFTSAWCCLDFIIVIVSVTTL-INLMELKSFRTLRA 1151
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ ++ G+K +V A+I ++ + +V+++ + VF ++G+ GK
Sbjct: 1152 LRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLVFCILGVYFFSGK 1203
Score = 141 (54.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 43/160 (26%), Positives = 76/160 (47%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESA 81
+++V ++ P L I I+ N + + M S E ++FT I+ E
Sbjct: 566 VKKVLRTVMTDPFTELAITICIIINTVFLAMEHHKMEASFEKMLNIGNLVFTSIFIAEMC 625
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLA--ALRTFRVLRALKTV 138
+K++A L+ + Y R WN D IV L++ M L + LR+FRVLR K
Sbjct: 626 LKIIA----LDPYHYFRRGWNIFDSIVALLSFADVMNCVLQKRSWPFLRSFRVLRVFKLA 681
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
P L T++ + SV L + ++ + + +F+++G+Q
Sbjct: 682 KSWPTLNTLIKIIGNSVGALGSLTVVLVIVIFIFSVVGMQ 721
Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 42/171 (24%), Positives = 81/171 (47%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG--TPT-----IESTEVIFTGIYT 77
P N + + I+ +F + II+ I+ N I M+ P ++ +F I+T
Sbjct: 1351 PLNKCQGLVFDIVTSQIFDIIIISLIILNMISMMAESYNQPKAMKSILDHLNWVFVVIFT 1410
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN----------LAAL 126
E +K+ F L + Y + WN D +V+ L+ V TM L N +
Sbjct: 1411 LECLIKI----FALRQY-YFTNGWNLFDCVVVLLSIVSTMISTLENQEHIPFPPTLFRIV 1465
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A++G+
Sbjct: 1466 RLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAILGM 1516
>UNIPROTKB|J9PB93 [details] [associations]
symbol:SCN9A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 InterPro:IPR024583
Pfam:PF11933 EMBL:AAEX03017732 Ensembl:ENSCAFT00000046546
Uniprot:J9PB93
Length = 1846
Score = 458 (166.3 bits), Expect = 7.9e-42, P = 7.9e-42
Identities = 88/136 (64%), Positives = 111/136 (81%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNCI M M P ++ E FTGIYTFES VK++ARGF + FT+LRD WN
Sbjct: 1 MLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGEFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF+VI AY+T ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
ILT+F LSVFAL+GLQ
Sbjct: 121 ILTVFCLSVFALIGLQ 136
Score = 185 (70.2 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 1040 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 1099
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 1100 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 1155
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1156 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1205
Score = 185 (70.2 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P T E
Sbjct: 574 YRFAHTFLIWNCSPYWIKFKKLVYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 633
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+ E +K++A ++ + Y + WN D +++ L+ V + + D+
Sbjct: 634 VLTVGNLVFTGIFAAEMVLKLIA----MDPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 689
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 690 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 745
>UNIPROTKB|J9NX93 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008053 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01666
SMART:SM00015 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 GeneTree:ENSGT00650000092939
EMBL:AAEX03013493 Ensembl:ENSCAFT00000048602 Uniprot:J9NX93
Length = 1879
Score = 439 (159.6 bits), Expect = 8.6e-40, P = 8.6e-40
Identities = 85/136 (62%), Positives = 107/136 (78%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M P + E FT IYTFES VK++ARGF L +FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARGFCLHAFTFLRDPWN 60
Query: 103 WLDFIVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVI 162
WLDF VI +AY T +DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+
Sbjct: 61 WLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVM 120
Query: 163 ILTMFSLSVFALMGLQ 178
+LT+F LSVFAL+GLQ
Sbjct: 121 VLTVFCLSVFALIGLQ 136
Score = 195 (73.7 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 52/186 (27%), Positives = 96/186 (51%)
Query: 13 RFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG-TPTIESTEV 70
RF+ +W P + I++ ++++ P L I I+ N + M + T E E+
Sbjct: 553 RFAQRYLIWECCPLWMSIKQRVKFMVMDPFADLTITMCIVLNTLFMALEHYNMTAEFEEM 612
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-LGNL 123
+FTGI+T E K++A L+ + Y + WN D I++ L+ + +G+ +GNL
Sbjct: 613 LQVGNLVFTGIFTAEMTFKIIA----LDPYYYFQQGWNIFDSIIVILSLMELGLSRMGNL 668
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+FR+LR K P L T++ + SV L ++ ++ + +FA++G+Q
Sbjct: 669 SVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKN 728
Query: 184 KSDESH 189
S++ H
Sbjct: 729 YSEQRH 734
Score = 173 (66.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 46/170 (27%), Positives = 90/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMI-----MPGTPTI----ESTEVIFTGIYTFE 79
+R+ I+ H F FII IL + + + TI E + +FT I+ E
Sbjct: 1057 LRKTCYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYIFVLE 1116
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-----TMGI-DLGNLAALRTFRVLR 133
+K +A GF Y +AW WLDF+++ ++ + T+G ++G + +LRT R LR
Sbjct: 1117 MLLKWVAYGFK----KYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALR 1172
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 1173 PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFAGK 1222
>UNIPROTKB|C9JII9 [details] [associations]
symbol:SCN7A "Sodium channel protein type 7 subunit alpha"
species:9606 "Homo sapiens" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
EMBL:AC074101 EMBL:AC092583 HGNC:HGNC:10594 IPI:IPI00916153
ProteinModelPortal:C9JII9 STRING:C9JII9 Ensembl:ENST00000441411
HOGENOM:HOG000203784 ArrayExpress:C9JII9 Bgee:C9JII9 Uniprot:C9JII9
Length = 402
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 80/178 (44%), Positives = 109/178 (61%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRF+A L L PFN IRR I +LVHP F LFI+ ++L +C+ M +
Sbjct: 79 TFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQLFILISVLIDCVFMSLT 138
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E GIYTFE VK+ ARG SF++L D WNWLDF V +
Sbjct: 139 NLPKWRPVLENTLLGIYTFEILVKLFARGVWAGSFSFLGDPWNWLDFSVTVFEVIIRYSP 198
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L + L+T R LR LK + + GLK++VG +I +K L VIILT+F LS+F+L+G+
Sbjct: 199 LDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIFSLIGM 256
>UNIPROTKB|F8WD82 [details] [associations]
symbol:SCN7A "Sodium channel protein type 7 subunit alpha"
species:9606 "Homo sapiens" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
EMBL:AC074101 EMBL:AC092583 HGNC:HGNC:10594 IPI:IPI00917730
ProteinModelPortal:F8WD82 Ensembl:ENST00000424326
ArrayExpress:F8WD82 Bgee:F8WD82 Uniprot:F8WD82
Length = 762
Score = 385 (140.6 bits), Expect = 8.5e-35, P = 8.5e-35
Identities = 80/178 (44%), Positives = 109/178 (61%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRF+A L L PFN IRR I +LVHP F LFI+ ++L +C+ M +
Sbjct: 79 TFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQLFILISVLIDCVFMSLT 138
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E GIYTFE VK+ ARG SF++L D WNWLDF V +
Sbjct: 139 NLPKWRPVLENTLLGIYTFEILVKLFARGVWAGSFSFLGDPWNWLDFSVTVFEVIIRYSP 198
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L + L+T R LR LK + + GLK++VG +I +K L VIILT+F LS+F+L+G+
Sbjct: 199 LDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIFSLIGM 256
Score = 143 (55.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 44/186 (23%), Positives = 90/186 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + ++ I++ P LF+I I+ N + + P + T
Sbjct: 476 YKFAKTFLIWNCSPCWLKLKEFVHRIIMAPFTDLFLIICIILNVCFLTLEHYPMSKQTNT 535
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++F GI+T E K++A + + Y + WN D +++ + + + ++
Sbjct: 536 LLNIGNLVFIGIFTAEMIFKIIA----MHPYGYFQVGWNIFDSMIVFHGLIELCLANVAG 591
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF-ALMGLQDSR 181
+A LR FR+LR K P + ++ ++ S L+D+++L +F+ F A G++
Sbjct: 592 MALLRLFRMLRIFKLGKYWPTFQILMWSLSNSWVALKDLVLL-LFTFIFFSAAFGMK-LF 649
Query: 182 GKKSDE 187
GK +E
Sbjct: 650 GKNYEE 655
>UNIPROTKB|C9JW43 [details] [associations]
symbol:SCN7A "Sodium channel protein type 7 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 GO:GO:0005248
HOGENOM:HOG000231755 GO:GO:0001518 EMBL:AC074101 EMBL:AC092583
HGNC:HGNC:10594 IPI:IPI00916977 ProteinModelPortal:C9JW43
STRING:C9JW43 Ensembl:ENST00000419992 ArrayExpress:C9JW43
Bgee:C9JW43 Uniprot:C9JW43
Length = 863
Score = 385 (140.6 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 80/178 (44%), Positives = 109/178 (61%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRF+A L L PFN IRR I +LVHP F LFI+ ++L +C+ M +
Sbjct: 79 TFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQLFILISVLIDCVFMSLT 138
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E GIYTFE VK+ ARG SF++L D WNWLDF V +
Sbjct: 139 NLPKWRPVLENTLLGIYTFEILVKLFARGVWAGSFSFLGDPWNWLDFSVTVFEVIIRYSP 198
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L + L+T R LR LK + + GLK++VG +I +K L VIILT+F LS+F+L+G+
Sbjct: 199 LDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIFSLIGM 256
Score = 143 (55.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/186 (23%), Positives = 90/186 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + ++ I++ P LF+I I+ N + + P + T
Sbjct: 476 YKFAKTFLIWNCSPCWLKLKEFVHRIIMAPFTDLFLIICIILNVCFLTLEHYPMSKQTNT 535
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++F GI+T E K++A + + Y + WN D +++ + + + ++
Sbjct: 536 LLNIGNLVFIGIFTAEMIFKIIA----MHPYGYFQVGWNIFDSMIVFHGLIELCLANVAG 591
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF-ALMGLQDSR 181
+A LR FR+LR K P + ++ ++ S L+D+++L +F+ F A G++
Sbjct: 592 MALLRLFRMLRIFKLGKYWPTFQILMWSLSNSWVALKDLVLL-LFTFIFFSAAFGMK-LF 649
Query: 182 GKKSDE 187
GK +E
Sbjct: 650 GKNYEE 655
>UNIPROTKB|C9JBM7 [details] [associations]
symbol:SCN3A "Sodium channel protein type 3 subunit alpha"
species:9606 "Homo sapiens" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005737 GO:GO:0005216
EMBL:AC013463 HGNC:HGNC:10590 IPI:IPI00935158
ProteinModelPortal:C9JBM7 SMR:C9JBM7 STRING:C9JBM7
Ensembl:ENST00000453007 HOGENOM:HOG000168322 BindingDB:C9JBM7
ArrayExpress:C9JBM7 Bgee:C9JBM7 Uniprot:C9JBM7
Length = 200
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 68/112 (60%), Positives = 87/112 (77%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++KGK IFRFSAT AL++L P NP+R++AI ILVH LFS+ I+ TILTNC+ M +
Sbjct: 89 TFIVMNKGKAIFRFSATSALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTLS 148
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
P ++ E FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI +
Sbjct: 149 NPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVM 200
>UNIPROTKB|I3LPL6 [details] [associations]
symbol:SCN11A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
GeneTree:ENSGT00650000092939 EMBL:AEMK01059457 EMBL:CU928576
Ensembl:ENSSSCT00000023912 Uniprot:I3LPL6
Length = 1418
Score = 384 (140.2 bits), Expect = 4.0e-34, P = 4.0e-34
Identities = 75/112 (66%), Positives = 90/112 (80%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFR 130
+FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL ++ LRTFR
Sbjct: 2 VFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFR 61
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
VLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ +G
Sbjct: 62 VLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGLQLFKG 113
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 39/171 (22%), Positives = 80/171 (46%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYT 77
P N + + ++ H +F + II I N + M+ +E + F I+T
Sbjct: 1153 PLNKCQGLVFDLVTHQVFDIIIIILIFLNMVSMMAESHDQSDRMKLILERLNLAFVVIFT 1212
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI----DLGNLAALRT-FRVL 132
E +K+ F L + Y + WN D +++ L+ V+ + D ++ T FRV+
Sbjct: 1213 MECLIKI----FALRQY-YFTNGWNLFDCVIVILSIVSTMVSVLEDQEHIPFPPTLFRVV 1267
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1268 RLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAIFGM 1318
>UNIPROTKB|Q01118 [details] [associations]
symbol:SCN7A "Sodium channel protein type 7 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] [GO:0006814 "sodium ion transport"
evidence=TAS] [GO:0006936 "muscle contraction" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
SMART:SM00015 Reactome:REACT_111045 GO:GO:0006936 GO:GO:0005248
eggNOG:NOG268129 HOGENOM:HOG000231755 GO:GO:0001518
HOVERGEN:HBG053100 EMBL:M91556 EMBL:AC074101 EMBL:AC092583
IPI:IPI00300117 PIR:A45380 RefSeq:NP_002967.2 UniGene:Hs.596087
UniGene:Hs.644853 ProteinModelPortal:Q01118 SMR:Q01118
STRING:Q01118 PhosphoSite:Q01118 DMDM:296452902 PRIDE:Q01118
Ensembl:ENST00000409855 GeneID:6332 KEGG:hsa:6332 UCSC:uc002udu.2
CTD:6332 GeneCards:GC02M167225 HGNC:HGNC:10594 HPA:HPA004879
MIM:182392 neXtProt:NX_Q01118 PharmGKB:PA35008 InParanoid:Q01118
KO:K04839 OMA:LEYADMI OrthoDB:EOG4GF3D9 ChEMBL:CHEMBL3585
GenomeRNAi:6332 NextBio:24592 ArrayExpress:Q01118 Bgee:Q01118
CleanEx:HS_SCN7A Genevestigator:Q01118 GermOnline:ENSG00000136546
Uniprot:Q01118
Length = 1682
Score = 385 (140.6 bits), Expect = 4.1e-34, P = 4.1e-34
Identities = 80/178 (44%), Positives = 109/178 (61%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V++K + IFRF+A L L PFN IRR I +LVHP F LFI+ ++L +C+ M +
Sbjct: 79 TFIVLNKNRTIFRFNAASILCTLSPFNCIRRTTIKVLVHPFFQLFILISVLIDCVFMSLT 138
Query: 61 GTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P E GIYTFE VK+ ARG SF++L D WNWLDF V +
Sbjct: 139 NLPKWRPVLENTLLGIYTFEILVKLFARGVWAGSFSFLGDPWNWLDFSVTVFEVIIRYSP 198
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L + L+T R LR LK + + GLK++VG +I +K L VIILT+F LS+F+L+G+
Sbjct: 199 LDFIPTLQTARTLRILKIIPLNQGLKSLVGVLIHCLKQLIGVIILTLFFLSIFSLIGM 256
Score = 143 (55.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 44/186 (23%), Positives = 90/186 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
++F+ T +W P + ++ I++ P LF+I I+ N + + P + T
Sbjct: 476 YKFAKTFLIWNCSPCWLKLKEFVHRIIMAPFTDLFLIICIILNVCFLTLEHYPMSKQTNT 535
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
++F GI+T E K++A + + Y + WN D +++ + + + ++
Sbjct: 536 LLNIGNLVFIGIFTAEMIFKIIA----MHPYGYFQVGWNIFDSMIVFHGLIELCLANVAG 591
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF-ALMGLQDSR 181
+A LR FR+LR K P + ++ ++ S L+D+++L +F+ F A G++
Sbjct: 592 MALLRLFRMLRIFKLGKYWPTFQILMWSLSNSWVALKDLVLL-LFTFIFFSAAFGMK-LF 649
Query: 182 GKKSDE 187
GK +E
Sbjct: 650 GKNYEE 655
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 44/165 (26%), Positives = 81/165 (49%)
Query: 29 IRRVAIYILVHPLFSLFI-ITTILTNCIL----MIMPGTPTI----ESTEVIFTGIYTFE 79
IR+ I+ + F FI + T+L+ L + M TI E ++IFT I+ E
Sbjct: 923 IRKTCCKIVENNWFKCFIGLVTLLSTGTLAFEDIYMDQRKTIKILLEYADMIFTYIFILE 982
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFRVLRALKTV 138
+K MA GF Y + W LDF+V+ + +++ G L L + + LR L+ +
Sbjct: 983 MLLKWMAYGFK----AYFSNGWYRLDFVVVIVFCLSLIGKTREELKPLISMKFLRPLRVL 1038
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ +K +V A+I++ +V ++ + +F++MG+ G+
Sbjct: 1039 SQFERMKVVVRALIKTTLPTLNVFLVCLMIWLIFSIMGVDLFAGR 1083
>UNIPROTKB|I3LB20 [details] [associations]
symbol:SCN11A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
GeneTree:ENSGT00650000092939 EMBL:AEMK01059457 EMBL:CU928576
Ensembl:ENSSSCT00000022895 Uniprot:I3LB20
Length = 1465
Score = 384 (140.2 bits), Expect = 4.2e-34, P = 4.2e-34
Identities = 75/112 (66%), Positives = 90/112 (80%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFR 130
+FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL ++ LRTFR
Sbjct: 2 VFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFR 61
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
VLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ +G
Sbjct: 62 VLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGLQLFKG 113
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 39/171 (22%), Positives = 80/171 (46%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYT 77
P N + + ++ H +F + II I N + M+ +E + F I+T
Sbjct: 1200 PLNKCQGLVFDLVTHQVFDIIIIILIFLNMVSMMAESHDQSDRMKLILERLNLAFVVIFT 1259
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI----DLGNLAALRT-FRVL 132
E +K+ F L + Y + WN D +++ L+ V+ + D ++ T FRV+
Sbjct: 1260 MECLIKI----FALRQY-YFTNGWNLFDCVIVILSIVSTMVSVLEDQEHIPFPPTLFRVV 1314
Query: 133 RA------LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1315 RLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAIFGM 1365
>UNIPROTKB|I3LLB1 [details] [associations]
symbol:SCN11A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005886 GO:GO:0005248
GO:GO:0044299 GeneTree:ENSGT00650000092939 EMBL:AEMK01059457
EMBL:CU928576 Ensembl:ENSSSCT00000023726 Uniprot:I3LLB1
Length = 1478
Score = 384 (140.2 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 75/112 (66%), Positives = 90/112 (80%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFR 130
+FT IYTFE+ +K++ARGF L FTYLRD WNWLDF VI LAYV IDL ++ LRTFR
Sbjct: 2 VFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFR 61
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
VLRALKTV+++PGLK IVGA+I SV+ L DV ILT+F LSVFAL+GLQ +G
Sbjct: 62 VLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTIFCLSVFALVGLQLFKG 113
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 38/170 (22%), Positives = 77/170 (45%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPT-------IESTEVIFTGIYT 77
P N + + ++ H +F + II I N + M+ +E + F I+T
Sbjct: 1203 PLNKCQGLVFDLVTHQVFDIIIIILIFLNMVSMMAESHDQSDRMKLILERLNLAFVVIFT 1262
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN----------LAALR 127
E +K+ F L + Y + WN D +++ L+ TM L + +R
Sbjct: 1263 MECLIKI----FALRQY-YFTNGWNLFDCVIVILSIGTMVSVLEDQEHIPFPPTLFRVVR 1317
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
R+ R L+ V G++T++ A++ S+ +L ++ +L + ++A+ G+
Sbjct: 1318 LARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLIMFIYAIFGM 1367
>UNIPROTKB|F1M780 [details] [associations]
symbol:Scn7a "Protein Scn7a" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
RGD:61922 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 IPI:IPI00400548
Ensembl:ENSRNOT00000040299 ArrayExpress:F1M780 Uniprot:F1M780
Length = 1682
Score = 358 (131.1 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 76/178 (42%), Positives = 108/178 (60%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + IFRF+A L L P + +RR I +LVHPLF L I+ ++LT+ ILM M
Sbjct: 79 TFMVLNRNRVIFRFNAVSILCTLSPLSSLRRAVIKVLVHPLFRLLILISVLTDSILMCMS 138
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P I + E GIYTFE VKV+ARG SF++L D WNWLDF V +T
Sbjct: 139 NLPEWILAVENTLLGIYTFEILVKVIARGIWAGSFSFLGDLWNWLDFSVTLFELITRSSP 198
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +L +T R LR LK + + GL++IV +++ +K L I L +F L+V +L G+
Sbjct: 199 LSSLPMFKTIRTLRILKIIPLNHGLQSIVVTLVQCLKKLLGAIALALFFLTVSSLFGM 256
Score = 144 (55.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTN-CILMI--MPGTPTIES 67
++F+ T +W P + + A I+ HPLF LF++ I+ N C L + P + + S
Sbjct: 476 YKFTKTCFIWKCSPCWIKLNEFADRIITHPLFDLFLVICIILNICFLALEHFPMSEELMS 535
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
++F GIYT E +K++A + + Y + +W+ D I++ L M L ++
Sbjct: 536 LLAIGNLVFIGIYTIEMILKIIA----MHPYGYFQISWHIFDSILVVLGLTEML--LADI 589
Query: 124 AALRTFRV--LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ F + L +K P K ++ + ++ L+D+++L + A+ G++
Sbjct: 590 EEITVFILVPLIFIKLGKYAPPFKNLMRILGRALVALKDLVLLVSIFIYFSAVFGMK 646
>UNIPROTKB|F1LQQ7 [details] [associations]
symbol:Scn7a "Protein Scn7a" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
RGD:61922 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00650000092939 IPI:IPI00326646
Ensembl:ENSRNOT00000041096 ArrayExpress:F1LQQ7 Uniprot:F1LQQ7
Length = 1704
Score = 358 (131.1 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 76/178 (42%), Positives = 108/178 (60%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + IFRF+A L L P + +RR I +LVHPLF L I+ ++LT+ ILM M
Sbjct: 79 TFMVLNRNRVIFRFNAVSILCTLSPLSSLRRAVIKVLVHPLFRLLILISVLTDSILMCMS 138
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P I + E GIYTFE VKV+ARG SF++L D WNWLDF V +T
Sbjct: 139 NLPEWILAVENTLLGIYTFEILVKVIARGIWAGSFSFLGDLWNWLDFSVTLFELITRSSP 198
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +L +T R LR LK + + GL++IV +++ +K L I L +F L+V +L G+
Sbjct: 199 LSSLPMFKTIRTLRILKIIPLNHGLQSIVVTLVQCLKKLLGAIALALFFLTVSSLFGM 256
Score = 144 (55.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTN-CILMI--MPGTPTIES 67
++F+ T +W P + + A I+ HPLF LF++ I+ N C L + P + + S
Sbjct: 498 YKFTKTCFIWKCSPCWIKLNEFADRIITHPLFDLFLVICIILNICFLALEHFPMSEELMS 557
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
++F GIYT E +K++A + + Y + +W+ D I++ L M L ++
Sbjct: 558 LLAIGNLVFIGIYTIEMILKIIA----MHPYGYFQISWHIFDSILVVLGLTEML--LADI 611
Query: 124 AALRTFRV--LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ F + L +K P K ++ + ++ L+D+++L + A+ G++
Sbjct: 612 EEITVFILVPLIFIKLGKYAPPFKNLMRILGRALVALKDLVLLVSIFIYFSAVFGMK 668
>UNIPROTKB|F1N4W9 [details] [associations]
symbol:SCN7A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00650000092939 OMA:LEYADMI
EMBL:DAAA02004354 EMBL:DAAA02004355 EMBL:DAAA02004356
IPI:IPI00710478 Ensembl:ENSBTAT00000038441 Uniprot:F1N4W9
Length = 1707
Score = 356 (130.4 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 81/180 (45%), Positives = 110/180 (61%)
Query: 1 TFVVVSKGKDIFRFSATDALW-VLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMI 58
TF+V++K + IFRF+AT W L PFN IRR I ILVHP F LFI+ ++LT+CI M
Sbjct: 80 TFIVLNKKRTIFRFNAT---WCTLSPFNSIRRATIKILVHPYPFLLFILVSVLTDCIYMS 136
Query: 59 MPGTPTI-ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMG 117
M P + + GIYTFE VK++ARG F + D+WNWLDF V +++
Sbjct: 137 MTDLPKWGPALQNTLLGIYTFEILVKLIARGIWAGPFYFFGDSWNWLDFSVTLFEHISRY 196
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L ++ R R LR LK + + GLK+ V +I +K L VIILT+F LSVF+L+G+
Sbjct: 197 SPLNFISVCRIMRNLRILKIIPLNQGLKSFVAILIHCLKKLTVVIILTLFFLSVFSLIGM 256
Score = 131 (51.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 48/186 (25%), Positives = 92/186 (49%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+ F+ T +W P + ++ I++ P LF+ I+ N + + P ++E++
Sbjct: 499 YEFAKTFLIWDCSPCWLKLKEFVHRIIMDPFTDLFLTICIILNIHFLALEHYPMSLETSN 558
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTMGIDLG 121
V+F GI+T E K++A + + Y + WN D +++ LA + + +
Sbjct: 559 ILSIGNVVFIGIFTAEMIFKIIA----MYPYGYFQVGWNIYDSLIVFHGLAELYL-TNFH 613
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF-ALMGLQ-- 178
LA LR+FRV+ K P K ++ + S+ L+D+++L +F+ F A++GL
Sbjct: 614 GLAILRSFRVVY-FKLGRYWPTFKILMLTLCNSIVALKDLVLL-LFTFIFFSAVVGLNLY 671
Query: 179 DSRGKK 184
S+ KK
Sbjct: 672 GSKYKK 677
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 29 IRRVAIYILVHPLFSLFI-ITTILTNCIL----MIMPGTPTI----ESTEVIFTGIYTFE 79
IR+ I+ + F FI + T+L+ L + + TI E ++IFT I+ E
Sbjct: 946 IRKTCCKIVENNCFKCFIGLVTLLSTGALAFEDIYIDQRKTIKILLEYADMIFTYIFILE 1005
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFRVLRALKTV 138
+K MA GF Y + W LDF+V+ + +++ G L L + + LRAL+ +
Sbjct: 1006 MLLKWMAYGFK----AYFTNGWYKLDFMVVIVFCLSLIGKSREELKPLVSIKFLRALRVL 1061
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ +K +V A+I++ +V ++ + F ++G+ GK
Sbjct: 1062 SQFEKMKVVVRALIKTTLPTLNVFLVCLMIWLAFGIIGVHLFAGK 1106
>UNIPROTKB|F1PF06 [details] [associations]
symbol:SCN7A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00650000092939 OMA:LEYADMI
EMBL:AAEX03017734 Ensembl:ENSCAFT00000018504 Uniprot:F1PF06
Length = 1689
Score = 340 (124.7 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 77/181 (42%), Positives = 107/181 (59%)
Query: 1 TFVVVSKGKDIFRFSATDALW-VLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILM 57
TF+V++K + IFRF+AT W PF+ RR I ILVHP F LFI+ ++L +CI M
Sbjct: 83 TFMVLNKSRTIFRFNAT---WCTFSPFSSTRRTTIKILVHPPTFFRLFILISVLIDCIFM 139
Query: 58 IMPGTPTIEST-EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM 116
M P + GIYTFE +K++ARG +E F + D WNWLDF V ++T
Sbjct: 140 SMTEMPKWGPVLQNTLLGIYTFEILIKLIARGIWVEPFYFFGDPWNWLDFSVTLFEHITR 199
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
+ L + R R LR LK + + GL++ VG +I +K L VI LT+F LSVF+L+G
Sbjct: 200 YLPLYFIPIFRISRNLRILKIIPLNQGLRSFVGILIHCLKKLTGVITLTLFFLSVFSLIG 259
Query: 177 L 177
+
Sbjct: 260 M 260
Score = 148 (57.2 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+R + T +W P + ++ I++ P L + I+ N + + P E T+
Sbjct: 480 YRCTKTFLIWNCSPCWLKLKEFIHMIIMDPFTDLVLAICIILNICFLALDSYPMSEETKN 539
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTMGIDLG 121
+I GI+T E +K++A + + Y + WN D +++ LA + ++
Sbjct: 540 VLSIGNLICVGIFTAEMILKIIA----MHPYGYFQVGWNIFDSLIVFHGLAEFYLA-NIH 594
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LA RTFRVLR K V P K ++ + +S+ L+D+++L + A++GL+
Sbjct: 595 GLAPFRTFRVLRIFKLVKYWPTFKILMQILNDSLVALKDLVLLLLTFTFFSAVVGLK 651
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 42/159 (26%), Positives = 78/159 (49%)
Query: 29 IRRVAIYILVHPLFSLFI-ITTILTNCIL----MIMPGTPTI----ESTEVIFTGIYTFE 79
IR+ I+ + F FI + T+L+ L + + TI E ++IFT I+ E
Sbjct: 928 IRKTCCKIVENSCFKCFIGLVTLLSTGALAFEDIYIDQRKTIKILLEYADMIFTYIFILE 987
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFRVLRALKTV 138
+K MA GF Y + W LDF+V+ + +++ G L L + + LRAL+ +
Sbjct: 988 MLLKWMAYGFK----AYFTNGWYKLDFMVVIVFCLSLIGKSREELKPLISIKFLRALRVL 1043
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ +K +V A+I++ +V ++ F+++G+
Sbjct: 1044 SQFERMKVVVRALIKTTLPTLNVFLVCFMIWLAFSILGV 1082
>UNIPROTKB|F1LNV8 [details] [associations]
symbol:Scn7a "Protein Scn7a" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
RGD:61922 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 IPI:IPI00948560
Ensembl:ENSRNOT00000068627 ArrayExpress:F1LNV8 Uniprot:F1LNV8
Length = 1682
Score = 331 (121.6 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 73/178 (41%), Positives = 104/178 (58%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP 60
TF+V+++ + IFRF+A L L P + +RR I +LVHP F + +LT+ ILM M
Sbjct: 79 TFMVLNRNRVIFRFNAVSILCTLSPLSSLRRAVIKVLVHP-FRRLLDVIVLTDSILMCMS 137
Query: 61 GTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
P I + E GIYTFE VKV+ARG SF++L D WNWLDF V +T
Sbjct: 138 NLPEWILAVENTLLGIYTFEILVKVIARGIWAGSFSFLGDLWNWLDFSVTLFELITRSSP 197
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +L +T R LR LK + + GL++IV +++ +K L I L +F L+V +L G+
Sbjct: 198 LSSLPMFKTIRTLRILKIIPLNHGLQSIVVTLVQCLKKLLGAIALALFFLTVSSLFGM 255
Score = 144 (55.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTN-CILMI--MPGTPTIES 67
++F+ T +W P + + A I+ HPLF LF++ I+ N C L + P + + S
Sbjct: 475 YKFTKTCFIWKCSPCWIKLNEFADRIITHPLFDLFLVICIILNICFLALEHFPMSEELMS 534
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
++F GIYT E +K++A + + Y + +W+ D I++ L M L ++
Sbjct: 535 LLAIGNLVFIGIYTIEMILKIIA----MHPYGYFQISWHIFDSILVVLGLTEML--LADI 588
Query: 124 AALRTFRV--LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ F + L +K P K ++ + ++ L+D+++L + A+ G++
Sbjct: 589 EEITVFILVPLIFIKLGKYAPPFKNLMRILGRALVALKDLVLLVSIFIYFSAVFGMK 645
>UNIPROTKB|F1LSB7 [details] [associations]
symbol:Scn7a "Protein Scn7a" species:10116 "Rattus
norvegicus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
RGD:61922 GO:GO:0035725 GO:GO:0005248 GO:GO:0001518 IPI:IPI00950923
Ensembl:ENSRNOT00000066208 ArrayExpress:F1LSB7 Uniprot:F1LSB7
Length = 1704
Score = 330 (121.2 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 74/179 (41%), Positives = 106/179 (59%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM 59
TF+V+++ + IFRF+A L L P + +RR I +LVHP F ++I +LT+ ILM M
Sbjct: 79 TFMVLNRNRVIFRFNAVSILCTLSPLSSLRRAVIKVLVHPYPFEGYVI--VLTDSILMCM 136
Query: 60 PGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI 118
P I + E GIYTFE VKV+ARG SF++L D WNWLDF V +T
Sbjct: 137 SNLPEWILAVENTLLGIYTFEILVKVIARGIWAGSFSFLGDLWNWLDFSVTLFELITRSS 196
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
L +L +T R LR LK + + GL++IV +++ +K L I L +F L+V +L G+
Sbjct: 197 PLSSLPMFKTIRTLRILKIIPLNHGLQSIVVTLVQCLKKLLGAIALALFFLTVSSLFGM 255
Score = 144 (55.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/177 (24%), Positives = 86/177 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTN-CILMI--MPGTPTIES 67
++F+ T +W P + + A I+ HPLF LF++ I+ N C L + P + + S
Sbjct: 497 YKFTKTCFIWKCSPCWIKLNEFADRIITHPLFDLFLVICIILNICFLALEHFPMSEELMS 556
Query: 68 T----EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
++F GIYT E +K++A + + Y + +W+ D I++ L M L ++
Sbjct: 557 LLAIGNLVFIGIYTIEMILKIIA----MHPYGYFQISWHIFDSILVVLGLTEML--LADI 610
Query: 124 AALRTFRV--LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ F + L +K P K ++ + ++ L+D+++L + A+ G++
Sbjct: 611 EEITVFILVPLIFIKLGKYAPPFKNLMRILGRALVALKDLVLLVSIFIYFSAVFGMK 667
>UNIPROTKB|I3LIT3 [details] [associations]
symbol:I3LIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
GeneTree:ENSGT00690000103486 Ensembl:ENSSSCT00000025109 OMA:FIVERFT
Uniprot:I3LIT3
Length = 66
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 49/65 (75%), Positives = 56/65 (86%)
Query: 72 FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRTFRV 131
FTGIYTFES +K++ARGF LE FT+LRD WNWLDF VI AYVT +DLGN++ALRTFRV
Sbjct: 2 FTGIYTFESLIKIIARGFCLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRV 61
Query: 132 LRALK 136
LRALK
Sbjct: 62 LRALK 66
>UNIPROTKB|O42419 [details] [associations]
symbol:SCN9A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005216 eggNOG:COG1226
GeneTree:ENSGT00560000076721 EMBL:AADN02020296 EMBL:AADN02020297
EMBL:AJ001489 IPI:IPI00821081 UniGene:Gga.563
Ensembl:ENSGALT00000038461 HOGENOM:HOG000200114 Uniprot:O42419
Length = 213
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 50/72 (69%), Positives = 66/72 (91%)
Query: 107 IVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTM 166
+VI+ AY+T ++LGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+
Sbjct: 1 VVISFAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTV 60
Query: 167 FSLSVFALMGLQ 178
F LSVFAL+GLQ
Sbjct: 61 FCLSVFALIGLQ 72
>UNIPROTKB|F1NZD4 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 IPI:IPI01017222 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 Ensembl:ENSGALT00000040090
ArrayExpress:F1NZD4 Uniprot:F1NZD4
Length = 2145
Score = 273 (101.2 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1114 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1173
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1174 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1233
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1234 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1293
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1294 FYCTDESKE 1302
Score = 254 (94.5 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1453 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1512
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1513 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1568
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1569 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1604
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 472 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 527
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 528 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 586
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 587 MKSIISLLFLLFLFIVVFALLGMQ 610
Score = 46 (21.3 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1224 TKGKDINTIKSLRVLRVLRPLKTIKRL 1250
>UNIPROTKB|F1NY22 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00821148
Ensembl:ENSGALT00000040094 ArrayExpress:F1NY22 Uniprot:F1NY22
Length = 2156
Score = 273 (101.2 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1125 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1184
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1185 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1244
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1245 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1304
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1305 FYCTDESKE 1313
Score = 254 (94.5 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1464 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1523
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1524 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1579
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1580 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1615
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00056
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 483 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 538
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 539 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 597
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 598 MKSIISLLFLLFLFIVVFALLGMQ 621
Score = 46 (21.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1235 TKGKDINTIKSLRVLRVLRPLKTIKRL 1261
>UNIPROTKB|F1NY19 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00819734
Ensembl:ENSGALT00000040098 ArrayExpress:F1NY19 Uniprot:F1NY19
Length = 2170
Score = 273 (101.2 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1139 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1198
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1199 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1258
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1259 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1318
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1319 FYCTDESKE 1327
Score = 254 (94.5 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1478 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1537
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1538 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1593
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1594 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1629
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 497 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 552
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 553 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 611
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 612 MKSIISLLFLLFLFIVVFALLGMQ 635
Score = 46 (21.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1249 TKGKDINTIKSLRVLRVLRPLKTIKRL 1275
>UNIPROTKB|F1NXH0 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00818605
Ensembl:ENSGALT00000040102 ArrayExpress:F1NXH0 Uniprot:F1NXH0
Length = 2181
Score = 273 (101.2 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1150 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1209
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1210 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1269
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1270 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1329
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1330 FYCTDESKE 1338
Score = 254 (94.5 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1489 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1548
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1549 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1604
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1605 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1640
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 508 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 563
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 564 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 622
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 623 MKSIISLLFLLFLFIVVFALLGMQ 646
Score = 46 (21.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1260 TKGKDINTIKSLRVLRVLRPLKTIKRL 1286
>UNIPROTKB|F1NY24 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00823292
Ensembl:ENSGALT00000040092 ArrayExpress:F1NY24 Uniprot:F1NY24
Length = 2320
Score = 273 (101.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1114 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1173
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1174 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1233
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1234 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1293
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1294 FYCTDESKE 1302
Score = 254 (94.5 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1453 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1512
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1513 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1568
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1569 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1604
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 472 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 527
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 528 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 586
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 587 MKSIISLLFLLFLFIVVFALLGMQ 610
Score = 46 (21.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1224 TKGKDINTIKSLRVLRVLRPLKTIKRL 1250
>UNIPROTKB|F1NY21 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00819224
Ensembl:ENSGALT00000040095 ArrayExpress:F1NY21 Uniprot:F1NY21
Length = 2331
Score = 273 (101.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1125 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1184
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1185 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1244
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1245 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1304
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1305 FYCTDESKE 1313
Score = 254 (94.5 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1464 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1523
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1524 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1579
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1580 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1615
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 483 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 538
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 539 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 597
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 598 MKSIISLLFLLFLFIVVFALLGMQ 621
Score = 46 (21.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1235 TKGKDINTIKSLRVLRVLRPLKTIKRL 1261
>UNIPROTKB|F1P3L1 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00604222
Ensembl:ENSGALT00000013779 ArrayExpress:F1P3L1 Uniprot:F1P3L1
Length = 2336
Score = 273 (101.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1128 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1187
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1188 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1247
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1248 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1307
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1308 FYCTDESKE 1316
Score = 255 (94.8 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 63/185 (34%), Positives = 107/185 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLF---IITTILTNCILMIM----PG---T 62
F+ +L++ N IR+ A I P FS F I+ TI+ NCI++ + P T
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFSPFEYMILATIIANCIVLALEQHLPDGDKT 120
Query: 63 PT---IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGI 118
P ++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G
Sbjct: 121 PMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGT 180
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
D +L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 181 DF-DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLE 239
Query: 179 DSRGK 183
GK
Sbjct: 240 FYMGK 244
Score = 145 (56.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 43/157 (27%), Positives = 79/157 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1467 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1526
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG------NLAALRTFRVLRALKTVAIV 141
+ Y RDAWN DF+ + L +T + ++ NL+ LR FR R +K +
Sbjct: 1527 L----NYFRDAWNVFDFVTV-LGSITDILVTEIADKDNFINLSFLRLFRAARLIKLLRQG 1581
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1582 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1618
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 486 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 541
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 542 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 600
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 601 MKSIISLLFLLFLFIVVFALLGMQ 624
Score = 46 (21.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1238 TKGKDINTIKSLRVLRVLRPLKTIKRL 1264
>UNIPROTKB|F1NXI1 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00820704
Ensembl:ENSGALT00000040100 ArrayExpress:F1NXI1 Uniprot:F1NXI1
Length = 2345
Score = 273 (101.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1139 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1198
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1199 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1258
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1259 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1318
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1319 FYCTDESKE 1327
Score = 254 (94.5 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1478 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1537
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1538 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1593
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1594 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1629
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 497 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 552
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 553 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 611
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 612 MKSIISLLFLLFLFIVVFALLGMQ 635
Score = 46 (21.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1249 TKGKDINTIKSLRVLRVLRPLKTIKRL 1275
>UNIPROTKB|F1P3L0 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9031 "Gallus gallus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0008217 "regulation of blood
pressure" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0048265
"response to pain" evidence=IEA] [GO:0051924 "regulation of calcium
ion transport" evidence=IEA] InterPro:IPR002077 InterPro:IPR005447
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631
GO:GO:0043025 GO:GO:0030425 GO:GO:0008016 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131 OMA:TQRTQDA
EMBL:AADN02026902 EMBL:AADN02026898 EMBL:AADN02026899
EMBL:AADN02026900 EMBL:AADN02026901 IPI:IPI00585029
Ensembl:ENSGALT00000013780 ArrayExpress:F1P3L0 Uniprot:F1P3L0
Length = 2356
Score = 273 (101.2 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 64/189 (33%), Positives = 108/189 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
++++L P NPIRR+ YI+ F + I+ I + I + P ++ +
Sbjct: 1150 SMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDY 1209
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
IFTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1210 IFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIK 1269
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1270 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRF 1329
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1330 FYCTDESKE 1338
Score = 254 (94.5 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 60/182 (32%), Positives = 105/182 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT- 64
F+ +L++ N IR+ A I P F ++ TI+ NCI++ + P TP
Sbjct: 61 FTVNRSLFIFSEDNVIRKYAKRITEWPYPFREAVLATIIANCIVLALEQHLPDGDKTPMS 120
Query: 65 --IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG 121
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D
Sbjct: 121 ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF- 179
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 180 DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYM 239
Query: 182 GK 183
GK
Sbjct: 240 GK 241
Score = 145 (56.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N I+++M E+ E ++FT +++ E +K++A G
Sbjct: 1489 VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV 1548
Query: 90 ILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN---LAALRTFRVLRALKTVAIVP 142
+ Y RDAWN DF+ + + VT D N L+ LR FR R +K +
Sbjct: 1549 L----NYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGY 1604
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1605 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1640
Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G Y ++
Sbjct: 508 VVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRNYFHSSF 563
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A V G G ++ LR R+LR K L+ +V +++ S
Sbjct: 564 NCFDFGVIVGSIFEVIWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 622
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 623 MKSIISLLFLLFLFIVVFALLGMQ 646
Score = 46 (21.3 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1260 TKGKDINTIKSLRVLRVLRPLKTIKRL 1286
>UNIPROTKB|F1NN70 [details] [associations]
symbol:SCN2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
GeneTree:ENSGT00560000076721 EMBL:AADN02020303 EMBL:AADN02020304
EMBL:AADN02020305 IPI:IPI00590395 Ensembl:ENSGALT00000017937
ArrayExpress:F1NN70 Uniprot:F1NN70
Length = 224
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 51/71 (71%), Positives = 63/71 (88%)
Query: 108 VIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMF 167
VI YVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F
Sbjct: 1 VIVFVYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVF 60
Query: 168 SLSVFALMGLQ 178
LSVFAL+GLQ
Sbjct: 61 CLSVFALIGLQ 71
>UNIPROTKB|Q05152 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9986 "Oryctolagus cuniculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IDA] [GO:0006816 "calcium ion transport"
evidence=IDA] [GO:0009986 "cell surface" evidence=IDA] [GO:0005245
"voltage-gated calcium channel activity" evidence=IDA]
InterPro:IPR002048 InterPro:IPR002077 InterPro:IPR005447
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631
PROSITE:PS50222 GO:GO:0005524 GO:GO:0009986 GO:GO:0046872
GO:GO:0006816 GO:GO:0005891 GO:GO:0005245 eggNOG:COG1226
InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763
PANTHER:PTHR10037:SF131 CTD:774 EMBL:D14157 RefSeq:NP_001075660.1
UniGene:Ocu.2138 PDB:3DVE PDB:3DVJ PDBsum:3DVE PDBsum:3DVJ
ProteinModelPortal:Q05152 DIP:DIP-29592N STRING:Q05152
GeneID:100008979 EvolutionaryTrace:Q05152 Uniprot:Q05152
Length = 2339
Score = 272 (100.8 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 62/181 (34%), Positives = 106/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+L +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKILALGFVLHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 259 (96.2 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 62/189 (32%), Positives = 103/189 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1134 SMFCLSPTNLLRRCCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSPRNNALKYMDY 1193
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1194 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIK 1253
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1254 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1313
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1314 FYCTDESKE 1322
Score = 147 (56.8 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1473 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1532
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1533 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1587
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1588 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1622
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 42 FSLFIITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTY 96
+++ + + T C+ M+ P +T E +F G++ E ++K+ G +Y
Sbjct: 487 WTVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSY 542
Query: 97 LRDAWNWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVG 149
R ++N DF VI A V G G ++ LR R+LR K L+ +V
Sbjct: 543 FRSSFNCFDFGVIVGSIFEVVWAAVKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVV 601
Query: 150 AVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+++ S+K++ ++ L + VFAL+G+Q
Sbjct: 602 SLLNSMKSIISLLFLLFLFIVVFALLGMQ 630
Score = 50 (22.7 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1244 SKGKDISTIKSLRVLRVLRPLKTIKRL 1270
>UNIPROTKB|G3X7Z2 [details] [associations]
symbol:CACNA1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0048265 "response to pain" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0008217 "regulation of blood pressure"
evidence=IEA] [GO:0008016 "regulation of heart contraction"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0007269 "neurotransmitter secretion" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA] [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
GO:GO:0043025 GO:GO:0030425 GO:GO:0007626 GO:GO:0008016
GO:GO:0008217 GO:GO:0007269 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 PANTHER:PTHR10037:SF131 GO:GO:0048265 OMA:TQRTQDA
EMBL:DAAA02032388 EMBL:DAAA02032382 EMBL:DAAA02032383
EMBL:DAAA02032384 EMBL:DAAA02032385 EMBL:DAAA02032386
EMBL:DAAA02032387 Ensembl:ENSBTAT00000048983 Uniprot:G3X7Z2
Length = 2331
Score = 271 (100.5 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 62/181 (34%), Positives = 106/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+L +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVLHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 260 (96.6 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 62/189 (32%), Positives = 105/189 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + + +P ++ +
Sbjct: 1122 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVQTDSPRNNVLKYMDY 1181
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1182 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIK 1241
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1242 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1301
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1302 FYCTDESKE 1310
Score = 148 (57.2 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 42/155 (27%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +KV+A G
Sbjct: 1461 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKVIAFGV 1520
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1521 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1575
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1576 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1610
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T + E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYQQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 547 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWSSLRNLVVSLLNS 605
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 606 MKSIISLLFLLFLFIVVFALLGMQ 629
Score = 50 (22.7 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1232 SKGKDISTIKSLRVLRVLRPLKTIKRL 1258
>ZFIN|ZDB-GENE-090514-4 [details] [associations]
symbol:cacna1bb "calcium channel, voltage-dependent,
N type, alpha 1B subunit, b" species:7955 "Danio rerio" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA] [GO:0034765
"regulation of ion transmembrane transport" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 ZFIN:ZDB-GENE-090514-4
GO:GO:0005891 GO:GO:0005245 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF131 EMBL:CR392036 EMBL:CU972453 EMBL:FP015973
IPI:IPI00801126 Ensembl:ENSDART00000089967 Uniprot:E7F278
Length = 2333
Score = 271 (100.5 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 59/179 (32%), Positives = 103/179 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++V P NP+RR+ Y++ F + I+T I + I + P ++ +
Sbjct: 1116 SMFVFGPTNPVRRLCHYVVNLRYFEMCILTVITMSSIALAAEDPVQAHAPRNDVLKYLDY 1175
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
+FTG++TFE +K++ G +L +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1176 VFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIK 1235
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + + +FA++ +Q +GK
Sbjct: 1236 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGK 1294
Score = 266 (98.7 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 59/180 (32%), Positives = 104/180 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N IR+ A I P F I+TTI+ NCI++ + P TP
Sbjct: 59 FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYLILTTIIANCIVLALEQHLPALDKTPMSE 118
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL 123
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ +T +L
Sbjct: 119 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKDSYLRNGWNIMDFVVVVTGILTTVGSQFDL 178
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++G++ GK
Sbjct: 179 RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGK 238
Score = 138 (53.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTPT-----IESTEVIFTGIYTFESAVKVMAR 87
+++ P F I+T I N ++++M G P ++ +IFT ++T E +KV+A
Sbjct: 1455 FVVSTP-FEYSILTMIAINTVVLMMKFHGAPKPYEDMLKWLNIIFTALFTLECVLKVIAF 1513
Query: 88 GFILESFTYLRDAWNWLDFIVIALAYVT------MGIDLG---NLAALRTFRVLRALKTV 138
G YL++AWN DF+ + L +T + D NL+ LR FR R +K +
Sbjct: 1514 G----PLNYLKEAWNIFDFVTV-LGSITDILVTEIKADKDKRINLSFLRLFRAARLIKLL 1568
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1569 RQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1608
Score = 46 (21.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1226 TKGKDINTIKSLRVLRVLRPLKTIKRL 1252
>UNIPROTKB|F1LZH5 [details] [associations]
symbol:Cacna1a "Voltage-dependent P/Q-type calcium channel
subunit alpha-1A" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005448 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632 RGD:2244 GO:GO:0005891
GO:GO:0005245 PANTHER:PTHR10037:SF59 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 IPI:IPI01016417
Ensembl:ENSRNOT00000003694 ArrayExpress:F1LZH5 Uniprot:F1LZH5
Length = 1762
Score = 269 (99.8 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 723 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 782
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 783 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 842
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 843 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 902
Query: 184 K---SDESHD 190
+DES +
Sbjct: 903 FFHCTDESKE 912
Score = 119 (46.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 43/157 (27%), Positives = 77/157 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIES----TEVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M G+ E +++ ++T + VM+ G
Sbjct: 1063 VVSPPFEYTIMAMIALNTIVLMMKILGGSQIHEQHRRCSDIQQESLFTLQCPNSVMSWG- 1121
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN------LAALRTFRVLRALKTVAIV 141
LE+ Y RDAWN DF+ + L +T + + GN L+ LR FR R +K +
Sbjct: 1122 -LEN--YFRDAWNIFDFVTV-LGSITDILVTEFGNPNNFINLSFLRLFRAARLIKLLRQG 1177
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1178 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1214
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 834 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 883
>UNIPROTKB|F1SD80 [details] [associations]
symbol:CACNA1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060024 "rhythmic synaptic transmission" evidence=IEA]
[GO:0051899 "membrane depolarization" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0050883 "musculoskeletal movement, spinal reflex action"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IEA]
[GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043113 "receptor clustering"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0042133
"neurotransmitter metabolic process" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032353
"negative regulation of hormone biosynthetic process" evidence=IEA]
[GO:0030644 "cellular chloride ion homeostasis" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0021750 "vestibular
nucleus development" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021679 "cerebellar
molecular layer development" evidence=IEA] [GO:0021590 "cerebellum
maturation" evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0017158 "regulation of calcium
ion-dependent exocytosis" evidence=IEA] [GO:0017156 "calcium
ion-dependent exocytosis" evidence=IEA] [GO:0016049 "cell growth"
evidence=IEA] [GO:0014056 "regulation of acetylcholine secretion"
evidence=IEA] [GO:0014051 "gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0008331 "high voltage-gated calcium channel
activity" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007274 "neuromuscular synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IEA]
[GO:0000096 "sulfur amino acid metabolic process" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005448 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632 GO:GO:0005634
GO:GO:0005737 GO:GO:0008219 GO:GO:0042995 GO:GO:0005891
GO:GO:0005245 PANTHER:PTHR10037:SF59 GeneTree:ENSGT00680000099892
OMA:QPGFWEG EMBL:CU467894 EMBL:CU914348 Ensembl:ENSSSCT00000015028
Uniprot:F1SD80
Length = 1844
Score = 269 (99.8 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1223 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1282
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1283 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1342
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1343 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1402
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1403 FFHCTDESKE 1412
Score = 243 (90.6 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 58/178 (32%), Positives = 103/178 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHP--LFSLFIITTILTNCILMIM----PG---TPT---IE 66
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPDTPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLD 136
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAA 125
TE F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L
Sbjct: 137 DTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRT 195
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 LRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 253
Score = 149 (57.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1563 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECLLKVMAFGI 1622
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1623 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1677
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1678 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1712
Score = 50 (22.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1334 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1383
>UNIPROTKB|F1M985 [details] [associations]
symbol:Cacna1a "Voltage-dependent P/Q-type calcium channel
subunit alpha-1A" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005448 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632 RGD:2244 GO:GO:0005891
GO:GO:0005245 PANTHER:PTHR10037:SF59 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 IPI:IPI00211870 PRIDE:F1M985
Ensembl:ENSRNOT00000032105 ArrayExpress:F1M985 Uniprot:F1M985
Length = 1915
Score = 269 (99.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 723 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 782
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 783 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 842
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 843 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 902
Query: 184 K---SDESHD 190
+DES +
Sbjct: 903 FFHCTDESKE 912
Score = 124 (48.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIES----TEVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M G+ E +++ ++T + VM+ G
Sbjct: 1063 VVSPPFEYTIMAMIALNTIVLMMKILGGSQIHEQHRRCSDIQQESLFTLQCPNSVMSWG- 1121
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
LE+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1122 -LEN--YFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1177
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1178 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1212
Score = 50 (22.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 834 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 883
>UNIPROTKB|F1LRQ4 [details] [associations]
symbol:Cacna1a "Voltage-dependent P/Q-type calcium channel
subunit alpha-1A" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005448 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632 RGD:2244 GO:GO:0005634
GO:GO:0005737 GO:GO:0016049 GO:GO:0008219 GO:GO:0043025
GO:GO:0007214 GO:GO:0030425 GO:GO:0048266 GO:GO:0007274
GO:GO:0050885 GO:GO:0043524 GO:GO:0035249 GO:GO:0006006
GO:GO:0048813 GO:GO:0021522 GO:GO:0050770 GO:GO:0007416
GO:GO:0014056 GO:GO:0051899 GO:GO:0043113 GO:GO:0017156
GO:GO:0042445 GO:GO:0014051 GO:GO:0007628 GO:GO:0021750
GO:GO:0021702 GO:GO:0000096 GO:GO:0030644 GO:GO:0005891
GO:GO:0060024 PANTHER:PTHR10037:SF59 GO:GO:0008331
InterPro:IPR014873 SMART:SM01062 GO:GO:0048791 GO:GO:0021679
GO:GO:0021590 GO:GO:0050883 GO:GO:0032353 GO:GO:0042133
GO:GO:0017158 Pfam:PF08763 IPI:IPI00949758
Ensembl:ENSRNOT00000067921 ArrayExpress:F1LRQ4 Uniprot:F1LRQ4
Length = 1916
Score = 269 (99.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 723 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 782
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 783 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 842
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 843 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 902
Query: 184 K---SDESHD 190
+DES +
Sbjct: 903 FFHCTDESKE 912
Score = 124 (48.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 43/155 (27%), Positives = 76/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIES----TEVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M G+ E +++ ++T + VM+ G
Sbjct: 1063 VVSPPFEYTIMAMIALNTIVLMMKILGGSQIHEQHRRCSDIQQESLFTLQCPNSVMSWG- 1121
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
LE+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1122 -LEN--YFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1177
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1178 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1212
Score = 50 (22.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 834 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 883
>RGD|2244 [details] [associations]
symbol:Cacna1a "calcium channel, voltage-dependent, P/Q type, alpha
1A subunit" species:10116 "Rattus norvegicus" [GO:0000096 "sulfur
amino acid metabolic process" evidence=ISO] [GO:0005245
"voltage-gated calcium channel activity" evidence=ISO;ISS;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=ISO;IDA;TAS] [GO:0006006 "glucose metabolic process"
evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO;IDA;IMP] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=ISO;ISS] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=ISO] [GO:0007268 "synaptic transmission"
evidence=ISO;IMP] [GO:0007270 "neuron-neuron synaptic transmission"
evidence=ISO] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISO] [GO:0007416 "synapse assembly" evidence=ISO]
[GO:0007628 "adult walking behavior" evidence=ISO] [GO:0008219 "cell
death" evidence=ISO] [GO:0008331 "high voltage-gated calcium channel
activity" evidence=ISO;IDA;IMP] [GO:0014051 "gamma-aminobutyric acid
secretion" evidence=ISO] [GO:0014056 "regulation of acetylcholine
secretion" evidence=ISO] [GO:0016049 "cell growth" evidence=ISO]
[GO:0017156 "calcium ion-dependent exocytosis" evidence=ISO]
[GO:0017158 "regulation of calcium ion-dependent exocytosis"
evidence=ISO] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0019233 "sensory perception of pain" evidence=IMP]
[GO:0019905 "syntaxin binding" evidence=ISO] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=ISO] [GO:0021590 "cerebellum
maturation" evidence=ISO] [GO:0021679 "cerebellar molecular layer
development" evidence=ISO] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=ISO] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=ISO] [GO:0021750 "vestibular nucleus
development" evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
[GO:0030644 "cellular chloride ion homeostasis" evidence=ISO]
[GO:0032353 "negative regulation of hormone biosynthetic process"
evidence=ISO] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISO] [GO:0042133 "neurotransmitter metabolic process"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0042403 "thyroid hormone metabolic process"
evidence=ISO] [GO:0042445 "hormone metabolic process" evidence=ISO]
[GO:0042995 "cell projection" evidence=ISO] [GO:0043025 "neuronal
cell body" evidence=ISO] [GO:0043113 "receptor clustering"
evidence=ISO] [GO:0043204 "perikaryon" evidence=IDA] [GO:0043234
"protein complex" evidence=IDA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048265 "response to pain" evidence=ISO]
[GO:0048266 "behavioral response to pain" evidence=ISO] [GO:0048791
"calcium ion-dependent exocytosis of neurotransmitter" evidence=ISO]
[GO:0048813 "dendrite morphogenesis" evidence=ISO] [GO:0050770
"regulation of axonogenesis" evidence=ISO] [GO:0050877 "neurological
system process" evidence=ISO] [GO:0050883 "musculoskeletal movement,
spinal reflex action" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=ISO] [GO:0050905 "neuromuscular
process" evidence=ISO] [GO:0051899 "membrane depolarization"
evidence=ISO] [GO:0060024 "rhythmic synaptic transmission"
evidence=ISO] [GO:0070509 "calcium ion import" evidence=IDA;IMP]
[GO:0070588 "calcium ion transmembrane transport" evidence=ISO]
[GO:0051932 "synaptic transmission, GABAergic" evidence=ISO]
InterPro:IPR002077 InterPro:IPR005448 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR00167 PRINTS:PR01632 RGD:2244 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0016049 GO:GO:0007268 GO:GO:0008219 GO:GO:0007214
GO:GO:0030425 GO:GO:0043204 GO:GO:0048266 GO:GO:0007274 GO:GO:0050885
GO:GO:0043524 GO:GO:0035249 GO:GO:0006006 GO:GO:0048813 GO:GO:0021522
GO:GO:0005516 GO:GO:0050770 GO:GO:0007416 GO:GO:0007204 GO:GO:0014056
GO:GO:0051899 GO:GO:0043113 GO:GO:0017156 GO:GO:0042445 GO:GO:0014051
GO:GO:0007628 GO:GO:0021750 GO:GO:0070509 GO:GO:0021702 GO:GO:0000096
GO:GO:0030644 GO:GO:0005891 GO:GO:0060024 PANTHER:PTHR10037:SF59
eggNOG:COG1226 GO:GO:0008331 InterPro:IPR014873 SMART:SM01062 CTD:773
HOVERGEN:HBG050763 KO:K04344 GO:GO:0048791 GO:GO:0021679
GO:GO:0021590 GO:GO:0050883 GO:GO:0032353 GO:GO:0042133 GO:GO:0017158
Pfam:PF08763 HOGENOM:HOG000231530 OrthoDB:EOG48KR9C EMBL:M64373
EMBL:M99222 IPI:IPI00211870 IPI:IPI00231785 PIR:A41098
RefSeq:NP_037050.2 UniGene:Rn.87769 ProteinModelPortal:P54282
DIP:DIP-29638N IntAct:P54282 STRING:P54282 TCDB:1.A.1.11.8
PhosphoSite:P54282 PRIDE:P54282 GeneID:25398 KEGG:rno:25398
BindingDB:P54282 ChEMBL:CHEMBL4417 NextBio:606481 ArrayExpress:P54282
Genevestigator:P54282 Uniprot:P54282
Length = 2212
Score = 269 (99.8 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1174 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1233
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1234 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1293
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1294 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1353
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1354 FFHCTDESKE 1363
Score = 254 (94.5 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 58/176 (32%), Positives = 103/176 (58%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT---IEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++ T
Sbjct: 79 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 138
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 139 EPYFIGIFCFEAGIKIVALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 197
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 198 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 253
Score = 150 (57.9 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1514 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1573
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1574 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1628
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1629 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1663
Score = 50 (22.7 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1285 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1334
>MGI|MGI:109482 [details] [associations]
symbol:Cacna1a "calcium channel, voltage-dependent, P/Q type,
alpha 1A subunit" species:10090 "Mus musculus" [GO:0000096 "sulfur
amino acid metabolic process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=ISO;IMP;IDA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0005891
"voltage-gated calcium channel complex" evidence=ISO;IDA]
[GO:0006006 "glucose metabolic process" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006816 "calcium ion transport" evidence=ISO;IMP] [GO:0007204
"elevation of cytosolic calcium ion concentration"
evidence=ISO;IDA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0007268 "synaptic transmission"
evidence=ISO;IMP] [GO:0007270 "neuron-neuron synaptic transmission"
evidence=IMP] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IMP] [GO:0007416 "synapse assembly" evidence=IMP]
[GO:0007628 "adult walking behavior" evidence=IGI;IMP] [GO:0008219
"cell death" evidence=ISO] [GO:0008331 "high voltage-gated calcium
channel activity" evidence=ISO;IGI;IMP] [GO:0014051
"gamma-aminobutyric acid secretion" evidence=IMP] [GO:0014056
"regulation of acetylcholine secretion" evidence=IMP] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016049 "cell growth" evidence=IMP] [GO:0017156
"calcium ion-dependent exocytosis" evidence=IMP] [GO:0017158
"regulation of calcium ion-dependent exocytosis" evidence=IDA]
[GO:0019226 "transmission of nerve impulse" evidence=IMP]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0019905
"syntaxin binding" evidence=ISO] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IMP] [GO:0021590 "cerebellum
maturation" evidence=IMP] [GO:0021679 "cerebellar molecular layer
development" evidence=IMP] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IMP] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IMP] [GO:0021750 "vestibular nucleus
development" evidence=IMP] [GO:0021953 "central nervous system
neuron differentiation" evidence=IMP] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030644 "cellular chloride ion homeostasis"
evidence=IMP] [GO:0032353 "negative regulation of hormone
biosynthetic process" evidence=IMP] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IMP] [GO:0042133
"neurotransmitter metabolic process" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IMP] [GO:0042403
"thyroid hormone metabolic process" evidence=IMP] [GO:0042445
"hormone metabolic process" evidence=IMP] [GO:0042995 "cell
projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043113 "receptor clustering" evidence=IMP]
[GO:0043204 "perikaryon" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048265 "response to pain" evidence=IMP]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048791
"calcium ion-dependent exocytosis of neurotransmitter"
evidence=IMP] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0050770 "regulation of axonogenesis" evidence=IMP] [GO:0050877
"neurological system process" evidence=IMP] [GO:0050883
"musculoskeletal movement, spinal reflex action" evidence=IMP]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IMP] [GO:0050905 "neuromuscular process" evidence=IGI;IMP]
[GO:0051899 "membrane depolarization" evidence=IMP] [GO:0051932
"synaptic transmission, GABAergic" evidence=IMP] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0060024 "rhythmic
synaptic transmission" evidence=IMP] [GO:0070509 "calcium ion
import" evidence=ISO] [GO:0070588 "calcium ion transmembrane
transport" evidence=IGI;IMP;IDA] InterPro:IPR002077
InterPro:IPR005448 InterPro:IPR005821 InterPro:IPR017956
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632 SMART:SM00384
MGI:MGI:109482 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0016049 GO:GO:0008219 GO:GO:0043025
GO:GO:0007214 GO:GO:0030425 GO:GO:0043204 GO:GO:0048266
GO:GO:0007274 GO:GO:0050885 GO:GO:0043524 GO:GO:0035249
GO:GO:0006006 GO:GO:0048813 GO:GO:0021522 GO:GO:0050770
GO:GO:0007416 GO:GO:0007204 GO:GO:0014056 GO:GO:0051899
GO:GO:0043113 GO:GO:0017156 GO:GO:0042445 GO:GO:0014051
GO:GO:0007628 GO:GO:0021750 GO:GO:0021702 GO:GO:0000096
GO:GO:0030644 GO:GO:0005891 GO:GO:0060024 PANTHER:PTHR10037:SF59
eggNOG:COG1226 GeneTree:ENSGT00680000099892 GO:GO:0008331
InterPro:IPR014873 SMART:SM01062 CTD:773 HOVERGEN:HBG050763
KO:K04344 GO:GO:0048791 GO:GO:0021679 GO:GO:0021590 GO:GO:0050883
GO:GO:0032353 GO:GO:0042133 GO:GO:0017158 Pfam:PF08763
EMBL:AY714490 EMBL:U76716 IPI:IPI00408646 RefSeq:NP_031604.3
UniGene:Mm.334658 ProteinModelPortal:P97445 SMR:P97445
IntAct:P97445 STRING:P97445 PhosphoSite:P97445 PRIDE:P97445
Ensembl:ENSMUST00000121390 GeneID:12286 KEGG:mmu:12286
UCSC:uc009mmn.2 HOGENOM:HOG000231530 InParanoid:P97445 OMA:QPGFWEG
OrthoDB:EOG48KR9C NextBio:280756 Bgee:P97445 Genevestigator:P97445
GermOnline:ENSMUSG00000034656 Uniprot:P97445
Length = 2368
Score = 269 (99.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1174 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1233
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1234 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1293
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1294 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1353
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1354 FFHCTDESKE 1363
Score = 254 (94.5 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 58/176 (32%), Positives = 103/176 (58%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT---IEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++ T
Sbjct: 79 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 138
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 139 EPYFIGIFCFEAGIKIVALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 197
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 198 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 253
Score = 150 (57.9 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1514 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1573
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1574 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1628
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1629 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1663
Score = 50 (22.7 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1285 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1334
>UNIPROTKB|P27884 [details] [associations]
symbol:CACNA1A "Voltage-dependent P/Q-type calcium channel
subunit alpha-1A" species:9986 "Oryctolagus cuniculus" [GO:0005245
"voltage-gated calcium channel activity" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IDA] [GO:0007204 "elevation of cytosolic
calcium ion concentration" evidence=ISS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0016021 "integral to
membrane" evidence=RCA] [GO:0008331 "high voltage-gated calcium
channel activity" evidence=IDA] InterPro:IPR002077
InterPro:IPR005448 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01632 GO:GO:0046872 GO:GO:0007204 GO:GO:0005891
GO:GO:0005245 PANTHER:PTHR10037:SF59 eggNOG:COG1226
InterPro:IPR014873 SMART:SM01062 CTD:773 HOVERGEN:HBG050763
Pfam:PF08763 EMBL:X57477 EMBL:X57689 EMBL:X57476 EMBL:X57688
PIR:I46477 PIR:I46480 RefSeq:NP_001095163.1 UniGene:Ocu.2123
PDB:3DVM PDBsum:3DVM ProteinModelPortal:P27884 DIP:DIP-29591N
GeneID:100009265 EvolutionaryTrace:P27884 Uniprot:P27884
Length = 2424
Score = 269 (99.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1232 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1291
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1292 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1351
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1352 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1411
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1412 FFHCTDESKE 1421
Score = 254 (94.5 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 58/176 (32%), Positives = 103/176 (58%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT---IEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++ T
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 136
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 137 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 195
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 251
Score = 146 (56.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 43/155 (27%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTPT-----IESTEVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M G ++ ++FT +++ E +KV+A G
Sbjct: 1572 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYDNALKVFNIVFTSLFSLECLLKVLAFGI 1631
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1632 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1686
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1687 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1721
Score = 50 (22.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1343 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1392
>UNIPROTKB|E2RS93 [details] [associations]
symbol:CACNA1A "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] InterPro:IPR002077 InterPro:IPR005448
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632
GO:GO:0005891 GO:GO:0005245 PANTHER:PTHR10037:SF59
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 OMA:QPGFWEG EMBL:AAEX03012385 EMBL:AAEX03012386
EMBL:AAEX03012387 EMBL:AAEX03012388 EMBL:AAEX03012389
EMBL:AAEX03012390 EMBL:AAEX03012391 Ensembl:ENSCAFT00000026809
Uniprot:E2RS93
Length = 2497
Score = 269 (99.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1222 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1281
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1282 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1341
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1342 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1401
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1402 FFHCTDESKE 1411
Score = 245 (91.3 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 58/178 (32%), Positives = 103/178 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT---IES 67
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPTPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDD 136
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV--TMGIDLGNLAA 125
TE F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L
Sbjct: 137 TEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGGILATVGTEF-DLRT 195
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 LRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 253
Score = 149 (57.5 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1562 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECLLKVMAFGI 1621
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1622 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1676
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1677 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1711
Score = 50 (22.7 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1333 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1382
>UNIPROTKB|F1N1E0 [details] [associations]
symbol:CACNA1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060024 "rhythmic synaptic transmission" evidence=IEA]
[GO:0051899 "membrane depolarization" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0050883 "musculoskeletal movement, spinal reflex action"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IEA]
[GO:0048791 "calcium ion-dependent exocytosis of neurotransmitter"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043113 "receptor clustering"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0042133
"neurotransmitter metabolic process" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032353
"negative regulation of hormone biosynthetic process" evidence=IEA]
[GO:0030644 "cellular chloride ion homeostasis" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0021750 "vestibular
nucleus development" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021679 "cerebellar
molecular layer development" evidence=IEA] [GO:0021590 "cerebellum
maturation" evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0017158 "regulation of calcium
ion-dependent exocytosis" evidence=IEA] [GO:0017156 "calcium
ion-dependent exocytosis" evidence=IEA] [GO:0016049 "cell growth"
evidence=IEA] [GO:0014056 "regulation of acetylcholine secretion"
evidence=IEA] [GO:0014051 "gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0008331 "high voltage-gated calcium channel
activity" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007416 "synapse assembly" evidence=IEA]
[GO:0007274 "neuromuscular synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IEA]
[GO:0000096 "sulfur amino acid metabolic process" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005448 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632 GO:GO:0005634
GO:GO:0005737 GO:GO:0016049 GO:GO:0008219 GO:GO:0043025
GO:GO:0007214 GO:GO:0030425 GO:GO:0048266 GO:GO:0007274
GO:GO:0050885 GO:GO:0043524 GO:GO:0035249 GO:GO:0006006
GO:GO:0048813 GO:GO:0021522 GO:GO:0050770 GO:GO:0007416
GO:GO:0014056 GO:GO:0051899 GO:GO:0043113 GO:GO:0017156
GO:GO:0042445 GO:GO:0014051 GO:GO:0007628 GO:GO:0021750
GO:GO:0021702 GO:GO:0000096 GO:GO:0030644 GO:GO:0005891
GO:GO:0060024 PANTHER:PTHR10037:SF59 GeneTree:ENSGT00680000099892
GO:GO:0008331 InterPro:IPR014873 SMART:SM01062 GO:GO:0048791
GO:GO:0021679 GO:GO:0021590 GO:GO:0050883 GO:GO:0032353
GO:GO:0042133 GO:GO:0017158 Pfam:PF08763 OMA:QPGFWEG
EMBL:DAAA02019375 EMBL:DAAA02019368 EMBL:DAAA02019369
EMBL:DAAA02019370 EMBL:DAAA02019371 EMBL:DAAA02019372
EMBL:DAAA02019373 EMBL:DAAA02019374 IPI:IPI00711552
Ensembl:ENSBTAT00000019752 Uniprot:F1N1E0
Length = 2502
Score = 269 (99.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1225 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1284
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1285 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1344
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1345 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1404
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1405 FFHCTDESKE 1414
Score = 254 (94.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 58/176 (32%), Positives = 103/176 (58%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT---IEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++ T
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 136
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 137 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 195
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 251
Score = 150 (57.9 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1565 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1624
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1625 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1679
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1680 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1714
Score = 50 (22.7 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1336 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1385
>UNIPROTKB|O00555 [details] [associations]
symbol:CACNA1A "Voltage-dependent P/Q-type calcium channel
subunit alpha-1A" species:9606 "Homo sapiens" [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0005245 "voltage-gated
calcium channel activity" evidence=ISS;IDA] [GO:0007204 "elevation
of cytosolic calcium ion concentration" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016021 "integral
to membrane" evidence=NAS;TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA;TAS] [GO:0042995 "cell projection" evidence=IDA]
[GO:0008219 "cell death" evidence=IDA] [GO:0019905 "syntaxin
binding" evidence=IDA] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0050796 "regulation of insulin secretion"
evidence=TAS] [GO:0051899 "membrane depolarization" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_111217 InterPro:IPR002077
InterPro:IPR005448 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01632 GO:GO:0016021 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0044281 GO:GO:0046872 GO:GO:0016049
GO:GO:0007268 GO:GO:0008219 GO:GO:0007214 GO:GO:0030425
GO:GO:0043204 GO:GO:0048266 GO:GO:0007274 GO:GO:0050885
GO:GO:0043524 GO:GO:0035249 GO:GO:0006112 GO:GO:0006006
GO:GO:0050796 GO:GO:0019905 GO:GO:0048813 GO:GO:0021522
GO:GO:0050770 GO:GO:0007416 GO:GO:0007204 GO:GO:0042995
GO:GO:0014056 GO:GO:0051899 GO:GO:0043113 GO:GO:0017156
GO:GO:0042445 GO:GO:0014051 GO:GO:0007628 GO:GO:0021750
DrugBank:DB01244 Orphanet:2131 Orphanet:569 GO:GO:0021702
GO:GO:0000096 GO:GO:0030644 GO:GO:0005891 GO:GO:0005245
GO:GO:0060024 PANTHER:PTHR10037:SF59 eggNOG:COG1226 GO:GO:0008331
InterPro:IPR014873 SMART:SM01062 EMBL:AF004883 EMBL:AF004884
EMBL:X99897 EMBL:Z80114 EMBL:Z80115 EMBL:U79663 EMBL:U79664
EMBL:U79665 EMBL:U79666 EMBL:U79667 EMBL:U79668 EMBL:AC005305
EMBL:AC008540 EMBL:AC011446 EMBL:AC022436 EMBL:AC026805
EMBL:AC098781 EMBL:AC124224 EMBL:S76537 EMBL:U06702 IPI:IPI00012136
IPI:IPI00217497 IPI:IPI00217498 IPI:IPI00217499 IPI:IPI00291347
IPI:IPI00397553 IPI:IPI00397554 RefSeq:NP_000059.3
RefSeq:NP_001120693.1 RefSeq:NP_001120694.1 RefSeq:NP_001167551.1
RefSeq:NP_075461.2 UniGene:Hs.501632 PDB:3BXK PDBsum:3BXK
ProteinModelPortal:O00555 SMR:O00555 IntAct:O00555 STRING:O00555
PhosphoSite:O00555 PaxDb:O00555 PRIDE:O00555 DNASU:773
Ensembl:ENST00000325084 GeneID:773 KEGG:hsa:773 UCSC:uc002mwy.3
UCSC:uc010dzc.2 UCSC:uc010dze.2 CTD:773 GeneCards:GC19M013317
HGNC:HGNC:1388 MIM:108500 MIM:141500 MIM:183086 MIM:601011
neXtProt:NX_O00555 Orphanet:71518 Orphanet:97 Orphanet:98758
PharmGKB:PA26007 HOVERGEN:HBG050763 InParanoid:O00555 KO:K04344
BindingDB:O00555 ChEMBL:CHEMBL4266 ChiTaRS:CACNA1A DrugBank:DB00568
DrugBank:DB00836 DrugBank:DB00401 DrugBank:DB00230
EvolutionaryTrace:O00555 GenomeRNAi:773 NextBio:3122
ArrayExpress:O00555 Bgee:O00555 Genevestigator:O00555
GermOnline:ENSG00000141837 GO:GO:0048791 GO:GO:0021679
GO:GO:0021590 GO:GO:0050883 GO:GO:0032353 GO:GO:0042133
GO:GO:0017158 Pfam:PF08763 Uniprot:O00555
Length = 2505
Score = 269 (99.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1223 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1282
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1283 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1342
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1343 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1402
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1403 FFHCTDESKE 1412
Score = 254 (94.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 58/176 (32%), Positives = 103/176 (58%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT---IEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++ T
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 136
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 137 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 195
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 251
Score = 150 (57.9 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1563 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1622
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1623 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1677
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1678 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1712
Score = 50 (22.7 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1334 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1383
>UNIPROTKB|I3L313 [details] [associations]
symbol:CACNA1A "Voltage-dependent P/Q-type calcium channel
subunit alpha-1A" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005448 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01632 GO:GO:0005891
GO:GO:0005245 PANTHER:PTHR10037:SF59 InterPro:IPR014873
SMART:SM01062 EMBL:AC005305 EMBL:AC008540 EMBL:AC011446
EMBL:AC022436 EMBL:AC026805 EMBL:AC098781 EMBL:AC124224
HGNC:HGNC:1388 ChiTaRS:CACNA1A Pfam:PF08763 EMBL:AC005513
EMBL:AC093062 ProteinModelPortal:I3L313 SMR:I3L313
Ensembl:ENST00000573710 Bgee:I3L313 Uniprot:I3L313
Length = 2506
Score = 269 (99.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/190 (33%), Positives = 106/190 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP+RR+ YIL F + I+ I + I + + P P + +
Sbjct: 1222 SMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDY 1281
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1282 VFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKGKDINTI 1341
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1342 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGK 1401
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1402 FFHCTDESKE 1411
Score = 254 (94.5 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 58/176 (32%), Positives = 103/176 (58%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT---IEST 68
+L++ N +R+ A I P F I+ TI+ NCI++ + P TP ++ T
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERLDDT 136
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ + T+G + +L LR
Sbjct: 137 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGTEF-DLRTLR 195
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 196 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGK 251
Score = 150 (57.9 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP---GTPTIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M + E+ ++FT +++ E +KVMA G
Sbjct: 1562 VVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGI 1621
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT------MGIDLGNLAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T G + NL+ LR FR R +K +
Sbjct: 1622 L----NYFRDAWNIFDFVTV-LGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYT 1676
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1677 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1711
Score = 50 (22.7 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
SKGKDI + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1333 SKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIV 1382
>ZFIN|ZDB-GENE-081104-526 [details] [associations]
symbol:cacna1r "calcium channel, voltage-dependent,
alpha 1R subunit" species:7955 "Danio rerio" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA] [GO:0034765
"regulation of ion transmembrane transport" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 ZFIN:ZDB-GENE-081104-526 GO:GO:0005891
GO:GO:0005245 GeneTree:ENSGT00680000099892 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF57 EMBL:CR381643
EMBL:CR450798 EMBL:BX927117 IPI:IPI00896854
Ensembl:ENSDART00000089971 Uniprot:F1R768
Length = 2318
Score = 268 (99.4 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 64/185 (34%), Positives = 108/185 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A I+ P F I+ TI+ NCI++ + PG TP
Sbjct: 139 FTVNRSLFIFGEDNIVRKYAKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMAK 198
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI-----ALAYVTMGI 118
+E TE F G++ FE+ +K++A GF+ +YLR+ WN +DFIV+ A A M I
Sbjct: 199 RLEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVSSGILATAGAHMNI 258
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L +L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 259 SL-DLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLE 317
Query: 179 DSRGK 183
GK
Sbjct: 318 FYSGK 322
Score = 241 (89.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 57/183 (31%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ P NP+RR Y++ F + I+ I + I + P + +V
Sbjct: 1212 SMFIFKPNNPVRRACHYVVNLRYFEMSILLVIAASSIALAAEDPVNTNSDRNKVLRYFDY 1271
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G +L +Y RD WN LDFIV+ A V G D+
Sbjct: 1272 VFTGVFTFEMIIKMIDQGLVLHYGSYFRDPWNILDFIVVVGALVAFALTNVMGSNTGRDI 1331
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1332 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1391
Query: 181 RGK 183
+GK
Sbjct: 1392 KGK 1394
Score = 139 (54.0 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 42/156 (26%), Positives = 76/156 (48%)
Query: 37 LVHPLFSLFIITTILTNCILMIMPG-TPTIESTE-------VIFTGIYTFESAVKVMARG 88
+V P F ++T I N I+++M P +E + IFT I++ E +K++A G
Sbjct: 1554 VVSPSFEYTVLTMIALNTIVLMMKHHDPRLEGYDDVLKYLNTIFTVIFSVECVLKILAFG 1613
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTMGID---LG---NLAALRTFRVLRALKTVAIVP 142
+ Y RD WN DFI + + + +D G N+ L+ FR R +K +
Sbjct: 1614 IM----NYFRDTWNIFDFITVLGSITEILVDKFQTGKTFNMGFLKLFRAARLIKLLRQGY 1669
Query: 143 GLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1670 TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1705
Score = 37 (18.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 8 GKDIFRFSATDALWVLDPFNPIRRV 32
G+DI + L VL P I+R+
Sbjct: 1328 GRDIKTIKSLRVLRVLRPLKTIKRL 1352
>UNIPROTKB|E9PIE8 [details] [associations]
symbol:CACNA1E "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:9606 "Homo sapiens" [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0002027 "regulation of
heart rate" evidence=IEA] [GO:0005245 "voltage-gated calcium
channel activity" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0019226 "transmission of nerve impulse" evidence=IEA]
[GO:0019233 "sensory perception of pain" evidence=IEA] [GO:0030317
"sperm motility" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0061178 "regulation of insulin secretion involved
in cellular response to glucose stimulus" evidence=IEA] [GO:0090273
"regulation of somatostatin secretion" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633 GO:GO:0005891
GO:GO:0005245 EMBL:AL161734 EMBL:AL160059 EMBL:AL359270
EMBL:AL590998 HGNC:HGNC:1392 PANTHER:PTHR10037:SF57 EMBL:AL356500
IPI:IPI00984475 ProteinModelPortal:E9PIE8 Ensembl:ENST00000524607
UCSC:uc009wxr.3 ArrayExpress:E9PIE8 Bgee:E9PIE8 Uniprot:E9PIE8
Length = 438
Score = 255 (94.8 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 63 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 122
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 123 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 182
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 183 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 242
Query: 180 SRGK 183
GK
Sbjct: 243 YSGK 246
>UNIPROTKB|B1AQK4 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
PANTHER:PTHR10037:SF131 EMBL:AL591424 EMBL:AL772363
RefSeq:NP_001230741.1 UniGene:Hs.495522 GeneID:774 KEGG:hsa:774
CTD:774 HGNC:HGNC:1389 KO:K04849 GenomeRNAi:774 NextBio:3128
IPI:IPI00889565 SMR:B1AQK4 Ensembl:ENST00000277551 UCSC:uc011mfd.2
Uniprot:B1AQK4
Length = 2237
Score = 267 (99.0 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 258 (95.9 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 62/189 (32%), Positives = 103/189 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1129 SMFCLSPTNLLRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDY 1188
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1189 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1248
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1249 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1308
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1309 FYCTDESKE 1317
Score = 143 (55.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1468 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1527
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG------NLAALRTFRVLRALKTVAIV 141
+ Y RDAWN DF+ + L +T + ++ NL+ LR FR R +K +
Sbjct: 1528 L----NYFRDAWNVFDFVTV-LGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQG 1582
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1583 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1619
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T T+ E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDF-IVIALAY--VTMGIDLGN---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
N DF +++ + V I G+ ++ LR R+LR K L+ +V +++ S+
Sbjct: 547 NCFDFGVIVGSVFEVVWAAIKPGSSFGISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSM 606
Query: 156 KNLRDVIILTMFSLSVFALMGLQ 178
K++ ++ L + VFAL+G+Q
Sbjct: 607 KSIISLLFLLFLFIVVFALLGMQ 629
Score = 49 (22.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1239 SKGKDINTIKSLRVLRVLRPLKTIKRL 1265
>FB|FBgn0263111 [details] [associations]
symbol:cac "cacophony" species:7227 "Drosophila melanogaster"
[GO:0007619 "courtship behavior" evidence=NAS;IMP] [GO:0008344
"adult locomotory behavior" evidence=IGI;IMP] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=NAS;IMP;TAS] [GO:0050908 "detection of light stimulus
involved in visual perception" evidence=IMP] [GO:0005245
"voltage-gated calcium channel activity" evidence=IDA;IMP;NAS]
[GO:0006816 "calcium ion transport" evidence=IMP;NAS] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=IMP] [GO:0016323
"basolateral plasma membrane" evidence=IDA] [GO:0042045 "epithelial
fluid transport" evidence=IEP;IDA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0007602 "phototransduction"
evidence=NAS] [GO:0007632 "visual behavior" evidence=NAS]
[GO:0048786 "presynaptic active zone" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=IMP;IDA] [GO:0006887 "exocytosis"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0045887 "positive regulation of synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0002027 "regulation of
heart rate" evidence=IMP] [GO:0046928 "regulation of
neurotransmitter secretion" evidence=IGI] [GO:0008331 "high
voltage-gated calcium channel activity" evidence=IMP] [GO:0008332
"low voltage-gated calcium channel activity" evidence=IMP]
InterPro:IPR002048 InterPro:IPR002077 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PROSITE:PS50222 GO:GO:0007275
GO:GO:0046872 GO:GO:0016324 GO:GO:0045887 GO:GO:0046928
EMBL:AE014298 GO:GO:0008344 GO:GO:0016323 GO:GO:0048786
GO:GO:0006887 GO:GO:0002027 GO:GO:0007269 GO:GO:0042045
GO:GO:0007602 GO:GO:0045433 GO:GO:0050908 GO:GO:0005891 EMBL:U55776
EMBL:U88664 EMBL:U88665 PIR:T13980 RefSeq:NP_001245639.1
RefSeq:NP_511133.2 RefSeq:NP_996416.1 RefSeq:NP_996417.1
RefSeq:NP_996418.1 RefSeq:NP_996419.1 RefSeq:NP_996420.1
ProteinModelPortal:P91645 SMR:P91645 STRING:P91645
EnsemblMetazoa:FBtr0307322 EnsemblMetazoa:FBtr0308609 GeneID:32158
KEGG:dme:Dmel_CG43368 CTD:12285 FlyBase:FBgn0263111 eggNOG:COG1226
GeneTree:ENSGT00680000099892 InParanoid:P91645 OrthoDB:EOG4H70SD
GenomeRNAi:32158 NextBio:777153 Bgee:P91645 GermOnline:CG1522
GO:GO:0008331 GO:GO:0008332 GO:GO:0007632 InterPro:IPR014873
SMART:SM01062 Uniprot:P91645
Length = 1851
Score = 266 (98.7 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 55/173 (31%), Positives = 103/173 (59%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG------TPTIEST 68
+L++L NPIR+ +I+ P F ++ TI+ NC+++ + PG +E T
Sbjct: 17 SLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPGGDKTVLAQKLEKT 76
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG---NLAA 125
E F I+ E+++K++A G +L +YLR+ WN +DF V+ ++T +G +L
Sbjct: 77 EAYFLCIFCVEASLKILALGLVLHKHSYLRNIWNIMDFFVVVTGFMTQYPQIGPEVDLRT 136
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LR RVLR LK V+ +P L+ ++ ++I+++ L + +L +F++ +FA++GL+
Sbjct: 137 LRAIRVLRPLKLVSGIPSLQVVLKSIIKAMAPLLQIGLLVLFAIVIFAIIGLE 189
Score = 247 (92.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 61/183 (33%), Positives = 103/183 (56%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIEST---------E 69
++++L P NPIRR A +++ P F FI+ I + I + P E++ +
Sbjct: 748 SMFILSPTNPIRRGAHWVVNLPYFDFFIMVVISMSSIALAAED-PVRENSRRNKILNYFD 806
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG------NL 123
FTG++T E +K++ G IL +YLR+ WN +D +V+ A V+ G D+ NL
Sbjct: 807 YAFTGVFTIEMLLKIVDLGVILHPGSYLREFWNIMDAVVVICAAVSFGFDMSGSSAGQNL 866
Query: 124 A---ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ VP LK + V+ S+KN+ +++I+ + +F+++G+Q
Sbjct: 867 STIKSLRVLRVLRPLKTIKRVPKLKAVFDCVVNSLKNVVNILIVYILFQFIFSVIGVQLF 926
Query: 181 RGK 183
GK
Sbjct: 927 NGK 929
Score = 125 (49.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 42/158 (26%), Positives = 81/158 (51%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMP----GTPTIESTEVI---FTGIYTFESAVKVMARG 88
I+V F FI+ I+ N +L++M G +S + I FTG+++ E+ +K++ G
Sbjct: 1091 IVVSTPFEYFIMMLIVFNTLLLMMKYHNQGDMYEKSLKYINMGFTGMFSVETVLKII--G 1148
Query: 89 FILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG-------NLAALRTFRVLRALKTVAI 140
F +++F +D WN D I + + V + ++ G N+ LR FR R +K +
Sbjct: 1149 FGVKNF--FKDPWNIFDLITVLGSIVDALWMEFGHDDSNSINVGFLRLFRAARLIKLLRQ 1206
Query: 141 VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1207 GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1244
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 37/149 (24%), Positives = 72/149 (48%)
Query: 42 FSLFIITTILTN--CILMIMPGTPTIES-----TEVIFTGIYTFESAVKVMARGFILESF 94
F F+I + N C+ + G P+ + E IF G++ E +K+ A G +
Sbjct: 443 FYWFVIVLVFLNTVCVAVEHYGQPSFLTEFLYYAEFIFLGLFMSEMFIKMYALGPRI--- 499
Query: 95 TYLRDAWNWLDFIVIA---LAYVTMGIDLGN--LAALRTFRVLRALKTVAIVPGLKTIVG 149
Y ++N D +VI+ + + G+ L+ LR R+LR K L+ +V
Sbjct: 500 -YFESSFNRFDCVVISGSIFEVIWSEVKGGSFGLSVLRALRLLRIFKVTKYWSSLRNLVI 558
Query: 150 AVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+++ S++++ ++ L + +FAL+G+Q
Sbjct: 559 SLLNSMRSIISLLFLLFLFILIFALLGMQ 587
Score = 36 (17.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
S G+++ + L VL P I+RV
Sbjct: 861 SAGQNLSTIKSLRVLRVLRPLKTIKRV 887
>MGI|MGI:88296 [details] [associations]
symbol:Cacna1b "calcium channel, voltage-dependent, N type,
alpha 1B subunit" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001956 "positive regulation
of neurotransmitter secretion" evidence=ISO] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0005244 "voltage-gated ion
channel activity" evidence=IEA] [GO:0005245 "voltage-gated calcium
channel activity" evidence=ISO;IMP] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006816 "calcium ion
transport" evidence=ISO;IMP] [GO:0007269 "neurotransmitter
secretion" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0008016 "regulation of heart contraction"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008217 "regulation of blood pressure"
evidence=IMP] [GO:0008331 "high voltage-gated calcium channel
activity" evidence=ISO] [GO:0014070 "response to organic cyclic
compound" evidence=ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019233
"sensory perception of pain" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0033574 "response to testosterone stimulus"
evidence=ISO] [GO:0034765 "regulation of ion transmembrane
transport" evidence=IEA] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043679 "axon terminus" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048265 "response
to pain" evidence=IMP] [GO:0051924 "regulation of calcium ion
transport" evidence=IMP] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0070509 "calcium ion import" evidence=ISO]
[GO:0070588 "calcium ion transmembrane transport" evidence=IMP]
InterPro:IPR002048 InterPro:IPR002077 InterPro:IPR005447
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631
PROSITE:PS50222 MGI:MGI:88296 GO:GO:0005524 GO:GO:0046872
GO:GO:0043025 GO:GO:0030425 GO:GO:0007626 GO:GO:0051924
GO:GO:0008016 GO:GO:0008217 GO:GO:0007269 GO:GO:0005891
GO:GO:0005245 eggNOG:COG1226 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763
HOGENOM:HOG000231530 PANTHER:PTHR10037:SF131 CTD:774 KO:K04849
EMBL:AF042317 EMBL:U04999 IPI:IPI00115062 IPI:IPI00466672
PIR:S41080 RefSeq:NP_001035993.1 UniGene:Mm.4424
ProteinModelPortal:O55017 SMR:O55017 IntAct:O55017 STRING:O55017
TCDB:1.A.1.11.9 PhosphoSite:O55017 PaxDb:O55017 PRIDE:O55017
Ensembl:ENSMUST00000041342 GeneID:12287 KEGG:mmu:12287
NextBio:280760 Bgee:O55017 Genevestigator:O55017
GermOnline:ENSMUSG00000004113 GO:GO:0048265 Uniprot:O55017
Length = 2327
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 223 (83.6 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 50/135 (37%), Positives = 80/135 (59%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GI 118
+ IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G
Sbjct: 1176 DYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGK 1235
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q
Sbjct: 1236 DINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQ 1295
Query: 179 DSRGKK---SDESHD 190
+GK +DES +
Sbjct: 1296 LFKGKFFYCTDESKE 1310
Score = 177 (67.4 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 53/171 (30%), Positives = 88/171 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1118 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1177
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------MGIDLG-NL 123
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V MG G ++
Sbjct: 1178 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDI 1237
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN-LRDVI-ILTMFSLSVF 172
+++ RVLR L+ + + L + AV + V N L++V+ IL ++ L +F
Sbjct: 1238 NTIKSLRVLRVLRPLKTIKRLPKLK-AVFDCVVNSLKNVLNILIVYMLFMF 1287
Score = 146 (56.5 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1461 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECILKIIAFGV 1520
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1521 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1575
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1576 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1610
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 547 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 605
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 606 MKSIISLLFLLFLFIVVFALLGMQ 629
Score = 51 (23.0 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
+F+ SKGKDI + L VL P I+R+
Sbjct: 1227 SFMGGSKGKDINTIKSLRVLRVLRPLKTIKRL 1258
>UNIPROTKB|F1LRE0 [details] [associations]
symbol:Cacna1b "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
RGD:628852 GO:GO:0005891 GO:GO:0005245 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF131 IPI:IPI00565585 Ensembl:ENSRNOT00000048945
ArrayExpress:F1LRE0 Uniprot:F1LRE0
Length = 2334
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 254 (94.5 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 62/189 (32%), Positives = 102/189 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1127 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1186
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1187 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1246
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1247 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1306
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1307 FYCTDESKE 1315
Score = 142 (55.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1466 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGV 1525
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG------NLAALRTFRVLRALKTVAIV 141
+ Y RDAWN DF+ + L +T + ++ NL+ LR FR R +K +
Sbjct: 1526 L----NYFRDAWNVFDFVTV-LGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQG 1580
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1581 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1617
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 492 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 547
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 548 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 606
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 607 MKSIISLLFLLFLFIVVFALLGMQ 630
Score = 49 (22.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1237 SKGKDINTIKSLRVLRVLRPLKTIKRL 1263
>UNIPROTKB|F1LQ87 [details] [associations]
symbol:Cacna1b "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
RGD:628852 GO:GO:0005891 GO:GO:0005245 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF131 IPI:IPI00200639 PRIDE:F1LQ87
Ensembl:ENSRNOT00000006162 ArrayExpress:F1LQ87 Uniprot:F1LQ87
Length = 2336
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 223 (83.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 50/135 (37%), Positives = 80/135 (59%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GI 118
+ IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G
Sbjct: 1185 DYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGK 1244
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q
Sbjct: 1245 DINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQ 1304
Query: 179 DSRGKK---SDESHD 190
+GK +DES +
Sbjct: 1305 LFKGKFFYCTDESKE 1319
Score = 177 (67.4 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 53/171 (30%), Positives = 88/171 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1127 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1186
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------MGIDLG-NL 123
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V MG G ++
Sbjct: 1187 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDI 1246
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN-LRDVI-ILTMFSLSVF 172
+++ RVLR L+ + + L + AV + V N L++V+ IL ++ L +F
Sbjct: 1247 NTIKSLRVLRVLRPLKTIKRLPKLK-AVFDCVVNSLKNVLNILIVYMLFMF 1296
Score = 146 (56.5 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1470 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGV 1529
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1530 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1584
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1585 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1619
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 492 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 547
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 548 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 606
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 607 MKSIISLLFLLFLFIVVFALLGMQ 630
Score = 51 (23.0 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
+F+ SKGKDI + L VL P I+R+
Sbjct: 1236 SFMGGSKGKDINTIKSLRVLRVLRPLKTIKRL 1267
>ZFIN|ZDB-GENE-070705-133 [details] [associations]
symbol:si:ch211-241e1.2 "si:ch211-241e1.2"
species:7955 "Danio rerio" [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0070588 "calcium ion
transmembrane transport" evidence=IEA] [GO:0005245 "voltage-gated
calcium channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005449
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
ZFIN:ZDB-GENE-070705-133 GO:GO:0005891 GO:GO:0005245 eggNOG:COG1226
GeneTree:ENSGT00680000099892 HOVERGEN:HBG050763
PANTHER:PTHR10037:SF57 EMBL:AL935300 EMBL:CT485611 IPI:IPI00855387
Ensembl:ENSDART00000134656 OrthoDB:EOG4N5VVZ Uniprot:A8B6E8
Length = 939
Score = 262 (97.3 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 63/179 (35%), Positives = 105/179 (58%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT---IEST 68
+L++ N IR+ A I+ P F I+ TI+ NCI++ + PG TP +E T
Sbjct: 23 SLFIFAENNMIRKYAKRIIEWPPFEYMILATIIANCIVLSLEQHLPGEDKTPMSKRLEKT 82
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG---NLA 124
E F GI+ FE+ +K++A GF+ +YLR+ WN +DFIV+ + T G + +L
Sbjct: 83 EPYFIGIFCFEAGIKLVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGSHMNIPVDLR 142
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR LK V+ +P L+ ++ ++I+++ L + +L F++ +FA++GL+ GK
Sbjct: 143 TLRAVRVLRPLKLVSGIPSLQIVLKSIIKAMVPLLQIGLLLFFAILMFAIIGLEFYSGK 201
Score = 248 (92.4 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 57/169 (33%), Positives = 96/169 (56%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------IFTGIY 76
P IRR+ Y++ F + I+ I+ + I + P + E +V +FTG++
Sbjct: 720 PAVSIRRICHYVVTLRYFEMTILLVIVASSIALAAEDPVCTSSERNKVLRYFDYVFTGVF 779
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGNLAALRTFRVLRA 134
TFE +K++ +G IL +Y RD WN LDFIV+ A + G D+ + +LR RVLR
Sbjct: 780 TFEMIIKMIDQGLILHDGSYFRDMWNILDFIVVVGALIANNKGRDIKTIKSLRVLRVLRP 839
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q +GK
Sbjct: 840 LKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGK 888
Score = 121 (47.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 41 LFSLFIITTILTNCILMIMPGTPTIES--TEVIFTGIYTFESAVKVMARGFILESFTYLR 98
+ SL + TI + + P T+ TE +F G++ E +K+ GF L Y
Sbjct: 440 VLSLVALNTISVSIVHHNQPEWLTVIQYYTEFVFLGLFLAEMFLKMYGLGFRL----YFH 495
Query: 99 DAWNWLD--FIV-----IALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAV 151
++N D IV + + G+ G ++ LR R+LR K L+ +V ++
Sbjct: 496 SSFNCFDCGVIVGSIFEVVWGFFRPGVSFG-ISVLRALRLLRIFKITKYWSSLRNLVVSL 554
Query: 152 IESVKNLRDVIILTMFSLSVFALMGLQ 178
+ S+K++ ++ L + VFAL+G+Q
Sbjct: 555 MSSMKSIISLLFLLFLFIVVFALLGMQ 581
>UNIPROTKB|B1AQK6 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
PANTHER:PTHR10037:SF131 EMBL:AL591424 EMBL:AL772363
UniGene:Hs.495522 HGNC:HGNC:1389 IPI:IPI00645750 SMR:B1AQK6
Ensembl:ENST00000371363 Uniprot:B1AQK6
Length = 2337
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 258 (95.9 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 62/189 (32%), Positives = 103/189 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1129 SMFCLSPTNLLRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDY 1188
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1189 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1248
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1249 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1308
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1309 FYCTDESKE 1317
Score = 147 (56.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1468 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1527
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1528 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1582
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1583 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1617
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T T+ E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDF-IVIALAY--VTMGIDLGN---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
N DF +++ + V I G+ ++ LR R+LR K L+ +V +++ S+
Sbjct: 547 NCFDFGVIVGSVFEVVWAAIKPGSSFGISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSM 606
Query: 156 KNLRDVIILTMFSLSVFALMGLQ 178
K++ ++ L + VFAL+G+Q
Sbjct: 607 KSIISLLFLLFLFIVVFALLGMQ 629
Score = 49 (22.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1239 SKGKDINTIKSLRVLRVLRPLKTIKRL 1265
>UNIPROTKB|B1AQK7 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
PANTHER:PTHR10037:SF131 EMBL:AL591424 EMBL:AL772363
UniGene:Hs.495522 HGNC:HGNC:1389 IPI:IPI00642867 SMR:B1AQK7
Ensembl:ENST00000371357 Uniprot:B1AQK7
Length = 2338
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 258 (95.9 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 62/189 (32%), Positives = 103/189 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1130 SMFCLSPTNLLRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDY 1189
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1190 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1249
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1250 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1309
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1310 FYCTDESKE 1318
Score = 147 (56.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1469 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1528
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1529 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1583
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1584 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1618
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T T+ E +F G++ E ++K+ G +Y R ++
Sbjct: 492 VVALNTLCVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 547
Query: 102 NWLDF-IVIALAY--VTMGIDLGN---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
N DF +++ + V I G+ ++ LR R+LR K L+ +V +++ S+
Sbjct: 548 NCFDFGVIVGSVFEVVWAAIKPGSSFGISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSM 607
Query: 156 KNLRDVIILTMFSLSVFALMGLQ 178
K++ ++ L + VFAL+G+Q
Sbjct: 608 KSIISLLFLLFLFIVVFALLGMQ 630
Score = 49 (22.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1240 SKGKDINTIKSLRVLRVLRPLKTIKRL 1266
>UNIPROTKB|Q00975 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006810 "transport" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0051899 "membrane depolarization" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005447 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01631 PROSITE:PS50222 GO:GO:0005524 GO:GO:0046872
GO:GO:0007268 DrugBank:DB00996 GO:GO:0051899 GO:GO:0005891
GO:GO:0005245 eggNOG:COG1226 InterPro:IPR014873 SMART:SM01062
HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
OrthoDB:EOG48KR9C PANTHER:PTHR10037:SF131 EMBL:M94172 EMBL:M94173
EMBL:AL591424 EMBL:AL772363 EMBL:U76666 IPI:IPI00025477
IPI:IPI00220431 PIR:A42566 PIR:T45115 RefSeq:NP_000709.1
RefSeq:NP_001230741.1 UniGene:Hs.495522 PDB:2LCM PDBsum:2LCM
ProteinModelPortal:Q00975 SMR:Q00975 IntAct:Q00975 MINT:MINT-102376
STRING:Q00975 PhosphoSite:Q00975 DMDM:1705854 PaxDb:Q00975
PRIDE:Q00975 Ensembl:ENST00000371372 GeneID:774 KEGG:hsa:774
UCSC:uc004cog.3 CTD:774 GeneCards:GC09P140772 HGNC:HGNC:1389
HPA:HPA044347 MIM:601012 neXtProt:NX_Q00975 PharmGKB:PA26008
KO:K04849 BindingDB:Q00975 ChEMBL:CHEMBL4478 DrugBank:DB00381
GenomeRNAi:774 NextBio:3128 ArrayExpress:Q00975 Bgee:Q00975
CleanEx:HS_CACNA1B Genevestigator:Q00975 GermOnline:ENSG00000148408
Uniprot:Q00975
Length = 2339
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 258 (95.9 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 62/189 (32%), Positives = 103/189 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1129 SMFCLSPTNLLRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDY 1188
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1189 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1248
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1249 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1308
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1309 FYCTDESKE 1317
Score = 143 (55.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1468 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1527
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG------NLAALRTFRVLRALKTVAIV 141
+ Y RDAWN DF+ + L +T + ++ NL+ LR FR R +K +
Sbjct: 1528 L----NYFRDAWNVFDFVTV-LGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQG 1582
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1583 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1619
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T T+ E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDF-IVIALAY--VTMGIDLGN---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
N DF +++ + V I G+ ++ LR R+LR K L+ +V +++ S+
Sbjct: 547 NCFDFGVIVGSVFEVVWAAIKPGSSFGISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSM 606
Query: 156 KNLRDVIILTMFSLSVFALMGLQ 178
K++ ++ L + VFAL+G+Q
Sbjct: 607 KSIISLLFLLFLFIVVFALLGMQ 629
Score = 49 (22.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1239 SKGKDINTIKSLRVLRVLRPLKTIKRL 1265
>UNIPROTKB|F6RH32 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9606 "Homo sapiens" [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005245 "voltage-gated calcium
channel activity" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] [GO:0007269 "neurotransmitter
secretion" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IEA] [GO:0008016 "regulation of heart contraction"
evidence=IEA] [GO:0008217 "regulation of blood pressure"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0048265 "response to pain"
evidence=IEA] [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005447 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01631 PROSITE:PS50222 GO:GO:0043025 GO:GO:0030425
GO:GO:0007626 GO:GO:0008016 GO:GO:0008217 GO:GO:0007269
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 PANTHER:PTHR10037:SF131 EMBL:AL591424 EMBL:AL772363
IPI:IPI00025477 HGNC:HGNC:1389 GO:GO:0048265
ProteinModelPortal:F6RH32 SMR:F6RH32 PRIDE:F6RH32
Ensembl:ENST00000371355 OMA:TQRTQDA ArrayExpress:F6RH32 Bgee:F6RH32
Uniprot:F6RH32
Length = 2340
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 258 (95.9 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 62/189 (32%), Positives = 103/189 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1130 SMFCLSPTNLLRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDY 1189
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1190 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1249
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1250 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1309
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1310 FYCTDESKE 1318
Score = 143 (55.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1469 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1528
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG------NLAALRTFRVLRALKTVAIV 141
+ Y RDAWN DF+ + L +T + ++ NL+ LR FR R +K +
Sbjct: 1529 L----NYFRDAWNVFDFVTV-LGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQG 1583
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1584 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1620
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 47 ITTILTNCILMI---MPG--TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P T T+ E +F G++ E ++K+ G +Y R ++
Sbjct: 492 VVALNTLCVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 547
Query: 102 NWLDF-IVIALAY--VTMGIDLGN---LAALRTFRVLRALKTVAIVPGLKTIVGAVIESV 155
N DF +++ + V I G+ ++ LR R+LR K L+ +V +++ S+
Sbjct: 548 NCFDFGVIVGSVFEVVWAAIKPGSSFGISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSM 607
Query: 156 KNLRDVIILTMFSLSVFALMGLQ 178
K++ ++ L + VFAL+G+Q
Sbjct: 608 KSIISLLFLLFLFIVVFALLGMQ 630
Score = 49 (22.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1240 SKGKDINTIKSLRVLRVLRPLKTIKRL 1266
>UNIPROTKB|F1LQU2 [details] [associations]
symbol:Cacna1b "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
RGD:628852 GO:GO:0043025 GO:GO:0030425 GO:GO:0007626 GO:GO:0008016
GO:GO:0008217 GO:GO:0007269 GO:GO:0005891 GO:GO:0005245
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF131 GO:GO:0048265 IPI:IPI00948114
Ensembl:ENSRNOT00000065645 ArrayExpress:F1LQU2 Uniprot:F1LQU2
Length = 2352
Score = 267 (99.0 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 223 (83.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 50/135 (37%), Positives = 80/135 (59%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GI 118
+ IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G
Sbjct: 1201 DYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGK 1260
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q
Sbjct: 1261 DINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQ 1320
Query: 179 DSRGKK---SDESHD 190
+GK +DES +
Sbjct: 1321 LFKGKFFYCTDESKE 1335
Score = 177 (67.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 53/171 (30%), Positives = 88/171 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1143 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1202
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------MGIDLG-NL 123
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V MG G ++
Sbjct: 1203 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDI 1262
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN-LRDVI-ILTMFSLSVF 172
+++ RVLR L+ + + L + AV + V N L++V+ IL ++ L +F
Sbjct: 1263 NTIKSLRVLRVLRPLKTIKRLPKLK-AVFDCVVNSLKNVLNILIVYMLFMF 1312
Score = 146 (56.5 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1486 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGV 1545
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1546 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1600
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1601 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1635
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 492 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 547
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 548 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 606
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 607 MKSIISLLFLLFLFIVVFALLGMQ 630
Score = 51 (23.0 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
+F+ SKGKDI + L VL P I+R+
Sbjct: 1252 SFMGGSKGKDINTIKSLRVLRVLRPLKTIKRL 1283
>RGD|628852 [details] [associations]
symbol:Cacna1b "calcium channel, voltage-dependent, N type, alpha
1B subunit" species:10116 "Rattus norvegicus" [GO:0001956 "positive
regulation of neurotransmitter secretion" evidence=IMP] [GO:0005245
"voltage-gated calcium channel activity" evidence=ISO;IMP]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA;ISO] [GO:0006816 "calcium ion transport"
evidence=ISO;IMP] [GO:0007269 "neurotransmitter secretion"
evidence=ISO] [GO:0007626 "locomotory behavior" evidence=ISO]
[GO:0008016 "regulation of heart contraction" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008217
"regulation of blood pressure" evidence=ISO] [GO:0008331 "high
voltage-gated calcium channel activity" evidence=IDA;IMP]
[GO:0014070 "response to organic cyclic compound" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0019233 "sensory
perception of pain" evidence=IMP] [GO:0030425 "dendrite"
evidence=ISO] [GO:0033574 "response to testosterone stimulus"
evidence=IMP] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043198
"dendritic shaft" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043679 "axon terminus" evidence=IDA] [GO:0045471
"response to ethanol" evidence=IEP] [GO:0048265 "response to pain"
evidence=ISO] [GO:0051924 "regulation of calcium ion transport"
evidence=ISO] [GO:0070509 "calcium ion import" evidence=IMP]
[GO:0070588 "calcium ion transmembrane transport" evidence=ISO]
InterPro:IPR002048 InterPro:IPR002077 InterPro:IPR005447
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631
PROSITE:PS50222 RGD:628852 GO:GO:0005886 GO:GO:0005524
GO:GO:0045471 GO:GO:0046872 GO:GO:0043198 GO:GO:0043025
GO:GO:0043679 GO:GO:0033574 GO:GO:0070509 GO:GO:0005891
eggNOG:COG1226 GO:GO:0008331 InterPro:IPR014873 SMART:SM01062
HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
PANTHER:PTHR10037:SF131 EMBL:M92905 IPI:IPI00948114 PIR:B35901
UniGene:Rn.85880 PDB:4DEX PDBsum:4DEX ProteinModelPortal:Q02294
IntAct:Q02294 MINT:MINT-102470 STRING:Q02294 PhosphoSite:Q02294
PRIDE:Q02294 UCSC:RGD:628852 BindingDB:Q02294 ChEMBL:CHEMBL5107
ArrayExpress:Q02294 Genevestigator:Q02294
GermOnline:ENSRNOG00000004560 GO:GO:0001956 Uniprot:Q02294
Length = 2336
Score = 266 (98.7 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 61/181 (33%), Positives = 105/181 (58%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L+V N +R+ A I P F I+ TI+ NCI++ + P TP
Sbjct: 69 FTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 128
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G D +
Sbjct: 129 RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTEILATAGTDF-D 187
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 188 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYMG 247
Query: 183 K 183
K
Sbjct: 248 K 248
Score = 223 (83.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 50/135 (37%), Positives = 80/135 (59%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GI 118
+ IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G
Sbjct: 1185 DYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGK 1244
Query: 119 DLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q
Sbjct: 1245 DINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQ 1304
Query: 179 DSRGKK---SDESHD 190
+GK +DES +
Sbjct: 1305 LFKGKFFYCTDESKE 1319
Score = 177 (67.4 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 53/171 (30%), Positives = 88/171 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1127 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1186
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------MGIDLG-NL 123
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V MG G ++
Sbjct: 1187 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDI 1246
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN-LRDVI-ILTMFSLSVF 172
+++ RVLR L+ + + L + AV + V N L++V+ IL ++ L +F
Sbjct: 1247 NTIKSLRVLRVLRPLKTIKRLPKLK-AVFDCVVNSLKNVLNILIVYMLFMF 1296
Score = 144 (55.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 41/155 (26%), Positives = 78/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1470 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGV 1529
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K
Sbjct: 1530 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLCRQGYT 1584
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1585 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1619
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 492 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 547
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 548 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 606
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 607 MKSIISLLFLLFLFIVVFALLGMQ 630
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
+F+ SKGKDI + L VL P I+R+
Sbjct: 1236 SFMGGSKGKDINTIKSLRVLRVLRPLKTIKRL 1267
>UNIPROTKB|F8W0Q0 [details] [associations]
symbol:SCN8A "Sodium channel protein type 8 subunit alpha"
species:9606 "Homo sapiens" [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR005821 Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
EMBL:AC068987 InterPro:IPR024583 Pfam:PF11933 EMBL:AC013421
EMBL:AC025097 EMBL:AC140060 HGNC:HGNC:10596 ChiTaRS:SCN8A
IPI:IPI01022860 ProteinModelPortal:F8W0Q0 Ensembl:ENST00000551216
ArrayExpress:F8W0Q0 Bgee:F8W0Q0 Uniprot:F8W0Q0
Length = 475
Score = 254 (94.5 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 50/68 (73%), Positives = 63/68 (92%)
Query: 111 LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLS 170
+AYVT +DLGN++ALRTFRVLRALKT++++PGLKTIVGA+I+SVK L DV+ILT+F LS
Sbjct: 2 MAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLS 61
Query: 171 VFALMGLQ 178
VFAL+GLQ
Sbjct: 62 VFALIGLQ 69
>FB|FBgn0001991 [details] [associations]
symbol:Ca-alpha1D "Ca[2+]-channel protein alpha[[1]] subunit
D" species:7227 "Drosophila melanogaster" [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA;ISS;NAS]
[GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA;ISS;NAS] [GO:0006816 "calcium ion transport"
evidence=NAS] [GO:0006936 "muscle contraction" evidence=TAS]
[GO:0042045 "epithelial fluid transport" evidence=IEP;IDA]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0016323
"basolateral plasma membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=NAS] [GO:0070588 "calcium ion transmembrane
transport" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
EMBL:AE014134 GO:GO:0046872 GO:GO:0016324 GO:GO:0016323
GO:GO:0006936 GO:GO:0042045 GO:GO:0005891 GO:GO:0005245
eggNOG:COG1226 InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
GeneTree:ENSGT00680000099727 EMBL:U00690 EMBL:AY058268
RefSeq:NP_525104.2 RefSeq:NP_602305.1 RefSeq:NP_723952.1
RefSeq:NP_723953.1 UniGene:Dm.4099 ProteinModelPortal:Q24270
SMR:Q24270 IntAct:Q24270 STRING:Q24270 EnsemblMetazoa:FBtr0090006
GeneID:34950 KEGG:dme:Dmel_CG4894 CTD:34950 FlyBase:FBgn0001991
InParanoid:Q24270 KO:K05315 OMA:LCIRIVE OrthoDB:EOG476HF0
ChiTaRS:Ca-alpha1D GenomeRNAi:34950 NextBio:791045 Bgee:Q24270
GermOnline:CG4894 Uniprot:Q24270
Length = 2516
Score = 265 (98.3 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 60/188 (31%), Positives = 106/188 (56%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PGTP------TIEST 68
AL+ L NP+R + I I+ F I+ TI NCI + + PG+ T+E
Sbjct: 594 ALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQTLEKV 653
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-----DLGNL 123
E +F I+T E +K++A GF+L + YLR+ WN LDF ++ + ++ + D ++
Sbjct: 654 EYVFLVIFTAECVMKILAYGFVLHNGAYLRNGWNLLDFTIVVIGAISTALSQLMKDAFDV 713
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
ALR FRVLR L+ V+ VP L+ ++ ++++++ L + +L +F + ++A++GL+ GK
Sbjct: 714 KALRAFRVLRPLRLVSGVPSLQVVLNSILKAMVPLFHIALLVLFVIIIYAIIGLELFSGK 773
Query: 184 KSDESHDK 191
D+
Sbjct: 774 LHKACRDE 781
Score = 175 (66.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/119 (31%), Positives = 71/119 (59%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA--- 125
+ FT ++T E +K+++ GF+L + R A+N LD +V+ ++ +++ + N +
Sbjct: 1381 DYFFTAVFTIELILKLISYGFVLHDGAFCRSAFNLLDLLVVCVSLISL-VSSSNAISVVK 1439
Query: 126 -LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V VI +VK + +++++T +FA++G+Q +GK
Sbjct: 1440 ILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIVLVTCLLQFMFAVIGVQLFKGK 1498
Score = 124 (48.7 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-FIVIALAYVTMGIDLG--- 121
E T V F G++T E +K+ + GF Y +N D F+VI T+ + G
Sbjct: 1018 EYTNVFFIGLFTCEMLLKMYSLGFQ----GYFVSLFNRFDCFVVIGSITETLLTNTGMMP 1073
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
++ LR R+LR K L +V +++ S++++ +++L + +FAL+G+Q
Sbjct: 1074 PLGVSVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIASLLLLLFLFIVIFALLGMQV 1133
Query: 180 SRGK 183
GK
Sbjct: 1134 FGGK 1137
>ZFIN|ZDB-GENE-040724-26 [details] [associations]
symbol:cacna1aa "calcium channel, voltage-dependent,
P/Q type, alpha 1A subunit, a" species:7955 "Danio rerio"
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005448
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
ZFIN:ZDB-GENE-040724-26 GO:GO:0005891 GO:GO:0005245
PANTHER:PTHR10037:SF59 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763
HOGENOM:HOG000231530 EMBL:BX548009 IPI:IPI00496383
UniGene:Dr.107121 UniGene:Dr.152204 UniGene:Dr.156100
UniGene:Dr.156756 UniGene:Dr.156758 Ensembl:ENSDART00000138765
Uniprot:Q5RHB2
Length = 1939
Score = 262 (97.3 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 61/190 (32%), Positives = 107/190 (56%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++L NP RR+ YI+ F + I+ I + I + + P +P + +
Sbjct: 1103 SMFILTTTNPFRRLCHYIVTLRYFEMCILLVIAMSSIALAAEDPVWPESPRNNVLRYFDY 1162
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------GIDLGNL 123
+FTG++TFE +K++ G +L +Y RD WN LDFIV++ A V G D+ +
Sbjct: 1163 VFTGVFTFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTI 1222
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +G+
Sbjct: 1223 KSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGR 1282
Query: 184 K---SDESHD 190
+DES +
Sbjct: 1283 FFYCTDESKE 1292
Score = 261 (96.9 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 63/189 (33%), Positives = 106/189 (56%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A I F I+ TI+ NCI++ + P TP
Sbjct: 65 FTVNRSLFIFSEDNFVRKYAKKITECTPFEYMILATIIANCIVLALEQHLPDGDKTPMSE 124
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLGN 122
+E TE F GI+ FES +K++A GF +YLR+ WN +DF+V+ + T+G D +
Sbjct: 125 RLEDTEPYFIGIFCFESGIKILALGFAFHKGSYLRNGWNVMDFVVVLTGILSTVGSDF-D 183
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ G
Sbjct: 184 LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFAIIGLEFYMG 243
Query: 183 KKSDESHDK 191
K DK
Sbjct: 244 KFHTTCFDK 252
Score = 145 (56.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 46/167 (27%), Positives = 83/167 (49%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N I+++M G T E ++FT +++ E +K++A G
Sbjct: 1444 VVSPPFEYTIMALIALNTIVLMMKYDGASLTYEDVLKYLNIVFTSLFSMECILKIIAFG- 1502
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y +DAWN D + + L +T + +LGN L+ LR FR R +K +
Sbjct: 1503 ---ALNYFKDAWNIFDCVTV-LGSITDILVTELGNNFINLSFLRLFRAARLIKLLRQGET 1558
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESHD 190
++ ++ ++S K L V +L ++A++G+Q K +E+ D
Sbjct: 1559 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNIKIEENSD 1605
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 38/149 (25%), Positives = 70/149 (46%)
Query: 42 FSLFIITTILTNCILMIMPGTP-TIES----TEVIFTGIYTFESAVKVMARGFILESFTY 96
+++ + + T C+ ++ P T+ E IF GI+ E +K+ G + Y
Sbjct: 475 WTVLCLVGLNTLCVAVVHYDQPETLSDFLYFAEFIFLGIFMSEMCIKMYGLG----TRPY 530
Query: 97 LRDAWNWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVG 149
++N D IVI A + G G ++ LR R+LR K L+ +V
Sbjct: 531 FHSSFNCFDCIVICGSIFEVLWAMIQPGTSFG-ISVLRALRLLRIFKVTKYWASLRNLVV 589
Query: 150 AVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+++ S+K++ ++ L + VFAL+G+Q
Sbjct: 590 SLLNSMKSIISLLFLLFLFIVVFALLGMQ 618
Score = 51 (23.0 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
F SKGKDI + L VL P I+R+
Sbjct: 1210 FTGSSKGKDISTIKSLRVLRVLRPLKTIKRL 1240
>UNIPROTKB|F1NCX6 [details] [associations]
symbol:SCN5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR005821 InterPro:IPR008053 Pfam:PF00520
PRINTS:PR01666 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 EMBL:AADN02000270 EMBL:AADN02000271
EMBL:AADN02000272 IPI:IPI00600033 Ensembl:ENSGALT00000009866
ArrayExpress:F1NCX6 Uniprot:F1NCX6
Length = 210
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 49/71 (69%), Positives = 62/71 (87%)
Query: 108 VIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMF 167
VI Y+T +DLGN++ALRTFRVLRALKT++++ GLKTIVGA+I+SVK L DV+ILT+F
Sbjct: 1 VIVCVYITEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGALIQSVKKLADVMILTVF 60
Query: 168 SLSVFALMGLQ 178
LSVFAL+GLQ
Sbjct: 61 CLSVFALIGLQ 71
>ZFIN|ZDB-GENE-090514-3 [details] [associations]
symbol:cacna1ab "calcium channel, voltage-dependent,
P/Q type, alpha 1A subunit, b" species:7955 "Danio rerio"
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0001966 "thigmotaxis"
evidence=IMP] [GO:0007274 "neuromuscular synaptic transmission"
evidence=IMP] [GO:0036269 "swimming behavior" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005448
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
ZFIN:ZDB-GENE-090514-3 GO:GO:0007274 GO:GO:0001966 GO:GO:0005891
GO:GO:0005245 PANTHER:PTHR10037:SF59 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763 EMBL:CR769763
EMBL:CR855274 EMBL:CT573143 IPI:IPI01023966
Ensembl:ENSDART00000150130 Bgee:F8W3Z0 GO:GO:0036269 Uniprot:F8W3Z0
Length = 2319
Score = 261 (96.9 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 64/196 (32%), Positives = 107/196 (54%)
Query: 13 RFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV 70
R + ++L NP RR YIL F + I++ I + I + P + E +V
Sbjct: 1072 RIPPFSSCFILSTTNPFRRCCHYILTLRYFEMCILSVIAMSSIALAAEDPVSQDSERNKV 1131
Query: 71 ------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------G 117
+FTG++TFE +K++ G IL +Y RD WN+LDF+V++ A V G
Sbjct: 1132 LRYFDYVFTGVFTFEMLIKMVVLGLILHEGSYFRDLWNFLDFVVVSGALVAFAFTGSGKG 1191
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +
Sbjct: 1192 KDISIIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAV 1251
Query: 178 QDSRGKK---SDESHD 190
Q +G+ +DES +
Sbjct: 1252 QLFKGRFFYCTDESKE 1267
Score = 249 (92.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 60/176 (34%), Positives = 104/176 (59%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----P-G--TPT---IEST 68
+L++ N +R+ A I P F I+TTI+ NCI++ + P G TP +E T
Sbjct: 71 SLFLFSEDNIVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPVGDKTPLSERLEET 130
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-MGIDLGNLAALR 127
E F I+ FES +K++A GF +YLR+ WN +DF+V+ ++ +G +L +L LR
Sbjct: 131 EPYFIAIFCFESGIKILALGFAFHKGSYLRNGWNVMDFVVVLTGILSSVGSEL-DLRTLR 189
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L ++ +FA++GL+ GK
Sbjct: 190 AVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGVLLFVAILMFAIIGLEFYMGK 245
Score = 133 (51.9 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 43/154 (27%), Positives = 78/154 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F I++ I N I+++M G +++ ++FT + ES +K++A G
Sbjct: 1419 VVSPPFEYSIMSLIALNTIILMMKYNGASDAYDKVLKNLNIVFTTFFFMESILKIIAFG- 1477
Query: 90 ILESFTYLRDAWNWLDFI-VIALAYVTMGIDLGN----LAALRTFRVLRALKTVAIVPGL 144
+ +F RDAWN DF+ VI + +L N L+ LR FR R +K + +
Sbjct: 1478 -VRNF--FRDAWNIFDFVSVIGSITDILVTELVNNFINLSFLRLFRAARLIKLLRQGETI 1534
Query: 145 KTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ ++ ++S K L V +L ++A++G+Q
Sbjct: 1535 RILLWTFVQSFKALPYVCLLIAILFFIYAIIGMQ 1568
Score = 45 (20.9 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 2 FVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
F KGKDI + L VL P I+R+
Sbjct: 1185 FTGSGKGKDISIIKSLRVLRVLRPLKTIKRL 1215
>MGI|MGI:106217 [details] [associations]
symbol:Cacna1e "calcium channel, voltage-dependent, R type,
alpha 1E subunit" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0002027 "regulation of
heart rate" evidence=IMP] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=ISO;IMP] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=ISO;TAS] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IMP] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0008542 "visual learning" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019226 "transmission of nerve impulse" evidence=IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0030317
"sperm motility" evidence=IMP] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0042596 "fear response"
evidence=IMP] [GO:0043204 "perikaryon" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0048265 "response to pain" evidence=IMP]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0050877
"neurological system process" evidence=IMP] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0061178 "regulation of
insulin secretion involved in cellular response to glucose
stimulus" evidence=IMP] [GO:0070509 "calcium ion import"
evidence=ISO] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO;IMP] [GO:0090273 "regulation of somatostatin
secretion" evidence=IMP] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 MGI:MGI:106217 GO:GO:0046872
GO:GO:0019233 GO:GO:0048266 GO:GO:0008542 GO:GO:0007626
GO:GO:0042593 GO:GO:0030317 GO:GO:0019226 GO:GO:0002027
GO:GO:0001662 GO:GO:0061178 GO:GO:0005891 GO:GO:0005245
eggNOG:COG1226 InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763
Pfam:PF08763 OrthoDB:EOG45B1DN PANTHER:PTHR10037:SF57 EMBL:L29346
IPI:IPI00331064 PIR:C54972 UniGene:Mm.267517
ProteinModelPortal:Q61290 SMR:Q61290 IntAct:Q61290 STRING:Q61290
TCDB:1.A.1.11.3 PhosphoSite:Q61290 PaxDb:Q61290 PRIDE:Q61290
InParanoid:Q61290 Genevestigator:Q61290
GermOnline:ENSMUSG00000004110 GO:GO:0090273 Uniprot:Q61290
Length = 2272
Score = 259 (96.2 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 62/184 (33%), Positives = 106/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 64 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 123
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 124 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 183
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L ALR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 184 HVDLRALRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 243
Query: 180 SRGK 183
GK
Sbjct: 244 YSGK 247
Score = 244 (91.0 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1135 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1194
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1195 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1254
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1255 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1314
Query: 181 RGK 183
+GK
Sbjct: 1315 KGK 1317
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 35 YILVHPLFSLFIITTILTNCILMIM-----PGTP--TIESTEVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T ++ + FT +++ E +KV+A
Sbjct: 1476 HFVVSPSFEYTIMAMIALNTVVLMMKYYTAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1535
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1536 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1591
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1592 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1642
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1249 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1275
>UNIPROTKB|F6XN38 [details] [associations]
symbol:CACNA1B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005447 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01631 PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 PANTHER:PTHR10037:SF131 OMA:TQRTQDA
Ensembl:ENSCAFT00000030804 EMBL:AAEX03006718 EMBL:AAEX03006719
Uniprot:F6XN38
Length = 2334
Score = 257 (95.5 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 58/179 (32%), Positives = 98/179 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1128 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSPRNNALKYMDY 1187
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1188 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIK 1247
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+LR RVLR LKT+ +P LK + V+ S+KN+ +++++ M + +FA++ +Q +GK
Sbjct: 1248 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILVVYMLFMFIFAVIAVQLFKGK 1306
Score = 241 (89.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 53/153 (34%), Positives = 92/153 (60%)
Query: 42 FSLFIITTILTNCILMIM----PG---TPT---IESTEVIFTGIYTFESAVKVMARGFIL 91
F I+ TI+ NCI++ + P TP ++ TE F GI+ FE+ +K++A GF+
Sbjct: 95 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 154
Query: 92 ESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGA 150
+YLR+ WN +DF+V+ + T G D +L LR RVLR LK V+ +P L+ ++ +
Sbjct: 155 HKGSYLRNGWNVMDFVVVLTGILATAGTDF-DLRTLRAVRVLRPLKLVSGIPSLQVVLKS 213
Query: 151 VIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++++ L + +L F++ +FA++GL+ GK
Sbjct: 214 IMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGK 246
Score = 147 (56.8 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1467 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1526
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1527 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1581
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1582 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1616
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 490 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 545
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 546 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWSSLRNLVVSLLNS 604
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 605 MKSIISLLFLLFLFIVVFALLGMQ 628
Score = 50 (22.7 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1238 SKGKDISTIKSLRVLRVLRPLKTIKRL 1264
>UNIPROTKB|F8W8A2 [details] [associations]
symbol:CACNA1E "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633 GO:GO:0005891
GO:GO:0005245 InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
EMBL:AL161734 EMBL:AL160059 EMBL:AL359270 EMBL:AL590998
IPI:IPI00218338 HGNC:HGNC:1392 PANTHER:PTHR10037:SF57 EMBL:AL356500
ProteinModelPortal:F8W8A2 SMR:F8W8A2 Ensembl:ENST00000358338
ArrayExpress:F8W8A2 Bgee:F8W8A2 Uniprot:F8W8A2
Length = 2202
Score = 255 (94.8 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 14 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 73
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 74 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 133
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 134 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 193
Query: 180 SRGK 183
GK
Sbjct: 194 YSGK 197
Score = 244 (91.0 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1064 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1123
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1124 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANSMKTNKGRDI 1183
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1184 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1243
Query: 181 RGK 183
+GK
Sbjct: 1244 KGK 1246
Score = 137 (53.3 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +KV+A
Sbjct: 1405 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1464
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1465 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1520
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1521 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1571
Score = 43 (20.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1178 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1204
>RGD|2246 [details] [associations]
symbol:Cacna1e "calcium channel, voltage-dependent, R type, alpha
1E subunit" species:10116 "Rattus norvegicus" [GO:0001662 "behavioral
fear response" evidence=ISO] [GO:0002027 "regulation of heart rate"
evidence=ISO] [GO:0005245 "voltage-gated calcium channel activity"
evidence=ISO;IDA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IDA;TAS]
[GO:0006816 "calcium ion transport" evidence=ISO] [GO:0007626
"locomotory behavior" evidence=ISO] [GO:0008332 "low voltage-gated
calcium channel activity" evidence=TAS] [GO:0008542 "visual learning"
evidence=ISO] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0019233 "sensory perception of pain" evidence=ISO]
[GO:0030317 "sperm motility" evidence=ISO] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042596 "fear response" evidence=ISO]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048265 "response to pain"
evidence=ISO] [GO:0048266 "behavioral response to pain" evidence=ISO]
[GO:0050877 "neurological system process" evidence=ISO] [GO:0061178
"regulation of insulin secretion involved in cellular response to
glucose stimulus" evidence=ISO] [GO:0070509 "calcium ion import"
evidence=IDA] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] [GO:0090273 "regulation of somatostatin secretion"
evidence=ISO] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 RGD:2246 GO:GO:0046872 GO:GO:0043204
GO:GO:0005891 eggNOG:COG1226 GO:GO:0008332 InterPro:IPR014873
SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
OrthoDB:EOG45B1DN PANTHER:PTHR10037:SF57 EMBL:L15453 IPI:IPI00201157
PIR:A37490 UniGene:Rn.10742 PDB:3DVK PDBsum:3DVK
ProteinModelPortal:Q07652 DIP:DIP-46236N STRING:Q07652
PhosphoSite:Q07652 PRIDE:Q07652 UCSC:RGD:2246 BindingDB:Q07652
ChEMBL:CHEMBL4115 EvolutionaryTrace:Q07652 ArrayExpress:Q07652
Genevestigator:Q07652 GermOnline:ENSRNOG00000002863 Uniprot:Q07652
Length = 2222
Score = 255 (94.8 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 14 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 73
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 74 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 133
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 134 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 193
Query: 180 SRGK 183
GK
Sbjct: 194 YSGK 197
Score = 241 (89.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 58/183 (31%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIR+ YI+ F + I+ I + I + P E +V
Sbjct: 1084 SMFIFSTTNPIRKACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1143
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1144 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1203
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1204 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1263
Query: 181 RGK 183
+GK
Sbjct: 1264 KGK 1266
Score = 138 (53.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 35 YILVHPLFSLFIITTILTNCILMIM-----PGTP--TIESTEVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T ++ + FT +++ E +KV+A
Sbjct: 1425 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPWTYELALKYLNIAFTMVFSLECVLKVIAF 1484
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1485 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1540
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1541 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1591
Score = 43 (20.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1198 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1224
>UNIPROTKB|J3KP11 [details] [associations]
symbol:CACNA1E "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633 PROSITE:PS50222
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 EMBL:AL161734 EMBL:AL160059 EMBL:AL359270
EMBL:AL590998 HGNC:HGNC:1392 PANTHER:PTHR10037:SF57 EMBL:AL356500
ProteinModelPortal:J3KP11 Ensembl:ENST00000357570 Uniprot:J3KP11
Length = 2264
Score = 255 (94.8 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 14 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 73
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 74 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 133
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 134 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 193
Query: 180 SRGK 183
GK
Sbjct: 194 YSGK 197
Score = 244 (91.0 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1083 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1142
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1143 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANSMKTNKGRDI 1202
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1203 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1262
Query: 181 RGK 183
+GK
Sbjct: 1263 KGK 1265
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +KV+A
Sbjct: 1424 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1483
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1484 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1539
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1540 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1590
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1197 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1223
>UNIPROTKB|F1MP22 [details] [associations]
symbol:CACNA1E "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090273 "regulation of somatostatin secretion"
evidence=IEA] [GO:0061178 "regulation of insulin secretion involved
in cellular response to glucose stimulus" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0019226 "transmission of nerve impulse"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0002027
"regulation of heart rate" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 CTD:777 KO:K04852 OMA:HHMSVWE PANTHER:PTHR10037:SF57
EMBL:DAAA02043534 EMBL:DAAA02043535 EMBL:DAAA02043536
EMBL:DAAA02043537 EMBL:DAAA02043538 EMBL:DAAA02043539
EMBL:DAAA02043540 EMBL:DAAA02043541 IPI:IPI00924110
RefSeq:NP_001178052.1 UniGene:Bt.22875 ProteinModelPortal:F1MP22
Ensembl:ENSBTAT00000061031 GeneID:353113 KEGG:bta:353113
NextBio:20812697 Uniprot:F1MP22
Length = 2268
Score = 255 (94.8 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 63 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 122
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 123 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 182
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 183 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 242
Query: 180 SRGK 183
GK
Sbjct: 243 YSGK 246
Score = 244 (91.0 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1134 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1193
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1194 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1253
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1254 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1313
Query: 181 RGK 183
+GK
Sbjct: 1314 KGK 1316
Score = 136 (52.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +K++A
Sbjct: 1475 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKIIAF 1534
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1535 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1590
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1591 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1641
Score = 43 (20.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1248 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1274
>UNIPROTKB|F8W9Z1 [details] [associations]
symbol:CACNA1E "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633 PROSITE:PS50222
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 EMBL:AL161734 EMBL:AL160059 EMBL:AL359270
EMBL:AL590998 HGNC:HGNC:1392 PANTHER:PTHR10037:SF57 EMBL:AL356500
IPI:IPI00974219 ProteinModelPortal:F8W9Z1 SMR:F8W9Z1 PRIDE:F8W9Z1
Ensembl:ENST00000360108 ArrayExpress:F8W9Z1 Bgee:F8W9Z1
Uniprot:F8W9Z1
Length = 2294
Score = 255 (94.8 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 63 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 122
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 123 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 182
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 183 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 242
Query: 180 SRGK 183
GK
Sbjct: 243 YSGK 246
Score = 244 (91.0 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1113 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1172
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1173 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1232
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1233 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1292
Query: 181 RGK 183
+GK
Sbjct: 1293 KGK 1295
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +KV+A
Sbjct: 1454 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1513
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1514 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1569
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1570 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1620
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1227 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1253
>UNIPROTKB|F1LMS1 [details] [associations]
symbol:Cacna1e "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633 PROSITE:PS50222 RGD:2246
GO:GO:0005891 GO:GO:0005245 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF57 IPI:IPI00198751 PRIDE:F1LMS1
Ensembl:ENSRNOT00000003928 ArrayExpress:F1LMS1 Uniprot:F1LMS1
Length = 2296
Score = 255 (94.8 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 64 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 123
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 124 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 183
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 184 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 243
Query: 180 SRGK 183
GK
Sbjct: 244 YSGK 247
Score = 241 (89.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 58/183 (31%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIR+ YI+ F + I+ I + I + P E +V
Sbjct: 1115 SMFIFSTTNPIRKACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1174
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1175 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1234
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1235 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1294
Query: 181 RGK 183
+GK
Sbjct: 1295 KGK 1297
Score = 138 (53.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 35 YILVHPLFSLFIITTILTNCILMIM-----PGTP--TIESTEVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T ++ + FT +++ E +KV+A
Sbjct: 1456 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPWTYELALKYLNIAFTMVFSLECVLKVIAF 1515
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1516 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1571
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1572 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1622
Score = 43 (20.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1229 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1255
>UNIPROTKB|Q15878 [details] [associations]
symbol:CACNA1E "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:9606 "Homo sapiens" [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0061178
"regulation of insulin secretion involved in cellular response to
glucose stimulus" evidence=IEA] [GO:0090273 "regulation of
somatostatin secretion" evidence=IEA] [GO:0005245 "voltage-gated
calcium channel activity" evidence=IDA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS] [GO:0050796
"regulation of insulin secretion" evidence=TAS] [GO:0051899
"membrane depolarization" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_111217 InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 GO:GO:0044281 GO:GO:0046872
GO:GO:0007268 GO:GO:0006112 GO:GO:0050796 GO:GO:0051899
GO:GO:0005891 GO:GO:0005245 eggNOG:COG1226 InterPro:IPR014873
SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
EMBL:L27745 EMBL:L29384 EMBL:L29385 EMBL:AL161734 EMBL:AL160059
EMBL:AL359270 EMBL:AL590998 IPI:IPI00165045 IPI:IPI00218338
IPI:IPI00472283 PIR:A54972 PIR:B54972 RefSeq:NP_000712.2
RefSeq:NP_001192222.1 RefSeq:NP_001192223.1 UniGene:Hs.437444
PDB:3BXL PDBsum:3BXL ProteinModelPortal:Q15878 SMR:Q15878
STRING:Q15878 PhosphoSite:Q15878 DMDM:209572758 PaxDb:Q15878
PRIDE:Q15878 Ensembl:ENST00000367570 Ensembl:ENST00000367573
Ensembl:ENST00000526775 GeneID:777 KEGG:hsa:777 UCSC:uc001gow.3
UCSC:uc009wxs.3 UCSC:uc009wxt.3 CTD:777 GeneCards:GC01P181382
HGNC:HGNC:1392 HPA:HPA042515 MIM:601013 neXtProt:NX_Q15878
PharmGKB:PA26009 InParanoid:Q15878 KO:K04852 OMA:HHMSVWE
OrthoDB:EOG45B1DN BindingDB:Q15878 ChEMBL:CHEMBL1687682
EvolutionaryTrace:Q15878 GenomeRNAi:777 NextBio:3140
ArrayExpress:Q15878 Bgee:Q15878 CleanEx:HS_CACNA1E
Genevestigator:Q15878 GermOnline:ENSG00000198216
PANTHER:PTHR10037:SF57 Uniprot:Q15878
Length = 2313
Score = 255 (94.8 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 63 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 122
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 123 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 182
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 183 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 242
Query: 180 SRGK 183
GK
Sbjct: 243 YSGK 246
Score = 244 (91.0 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1132 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1191
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1192 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1251
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1252 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1311
Query: 181 RGK 183
+GK
Sbjct: 1312 KGK 1314
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +KV+A
Sbjct: 1473 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1532
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1533 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1588
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1589 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1639
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1246 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1272
>UNIPROTKB|F1PAH2 [details] [associations]
symbol:CACNA1E "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 OMA:HHMSVWE PANTHER:PTHR10037:SF57 EMBL:AAEX03005131
EMBL:AAEX03005132 EMBL:AAEX03005133 EMBL:AAEX03005134
Ensembl:ENSCAFT00000020724 Uniprot:F1PAH2
Length = 2469
Score = 255 (94.8 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 61/184 (33%), Positives = 105/184 (57%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG---TPT-- 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 209 FTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSR 268
Query: 65 -IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG- 121
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 269 RLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNT 328
Query: 122 --NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+
Sbjct: 329 HVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEF 388
Query: 180 SRGK 183
GK
Sbjct: 389 YSGK 392
Score = 244 (91.0 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1278 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1337
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1338 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1397
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1398 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1457
Query: 181 RGK 183
+GK
Sbjct: 1458 KGK 1460
Score = 136 (52.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +K++A
Sbjct: 1619 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKIIAF 1678
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1679 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1734
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1735 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1785
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1392 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1418
>UNIPROTKB|F1LLZ0 [details] [associations]
symbol:Cacna1b "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
RGD:628852 GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131 IPI:IPI00476965
Ensembl:ENSRNOT00000042895 ArrayExpress:F1LLZ0 Uniprot:F1LLZ0
Length = 2296
Score = 254 (94.5 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 62/189 (32%), Positives = 102/189 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1125 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1184
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1185 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1244
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1245 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1304
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1305 FYCTDESKE 1313
Score = 251 (93.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 61/186 (32%), Positives = 106/186 (56%)
Query: 9 KDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG--- 61
+ +F FS + VL +NP+ + H F I+ TI+ NCI++ + P
Sbjct: 73 RSLFVFSEDN---VLGAYNPV------LNPHTPFEYMILATIIANCIVLALEQHLPDGDK 123
Query: 62 TPT---IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMG 117
TP ++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G
Sbjct: 124 TPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAG 183
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
D +L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL
Sbjct: 184 TDF-DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL 242
Query: 178 QDSRGK 183
+ GK
Sbjct: 243 EFYMGK 248
Score = 142 (55.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1464 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGV 1523
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG------NLAALRTFRVLRALKTVAIV 141
+ Y RDAWN DF+ + L +T + ++ NL+ LR FR R +K +
Sbjct: 1524 L----NYFRDAWNVFDFVTV-LGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQG 1578
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1579 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1615
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 547 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 605
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 606 MKSIISLLFLLFLFIVVFALLGMQ 629
Score = 49 (22.3 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1235 SKGKDINTIKSLRVLRVLRPLKTIKRL 1261
>UNIPROTKB|F1LQ47 [details] [associations]
symbol:Cacna1b "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005447 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01631 PROSITE:PS50222
RGD:628852 GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131 IPI:IPI00364599
Ensembl:ENSRNOT00000045118 ArrayExpress:F1LQ47 Uniprot:F1LQ47
Length = 2333
Score = 254 (94.5 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 62/189 (32%), Positives = 102/189 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
+++ L P N +RR YI+ F + I+ I + I + +S +
Sbjct: 1126 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDY 1185
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------GIDLGNLA 124
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V G D+ +
Sbjct: 1186 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIK 1245
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK 184
+LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK
Sbjct: 1246 SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKF 1305
Query: 185 ---SDESHD 190
+DES +
Sbjct: 1306 FYCTDESKE 1314
Score = 251 (93.4 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 61/186 (32%), Positives = 106/186 (56%)
Query: 9 KDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PG--- 61
+ +F FS + VL +NP+ + H F I+ TI+ NCI++ + P
Sbjct: 73 RSLFVFSEDN---VLGAYNPV------LNPHTPFEYMILATIIANCIVLALEQHLPDGDK 123
Query: 62 TPT---IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMG 117
TP ++ TE F GI+ FE+ +K++A GF+ +YLR+ WN +DF+V+ + T G
Sbjct: 124 TPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAG 183
Query: 118 IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
D +L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL
Sbjct: 184 TDF-DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL 242
Query: 178 QDSRGK 183
+ GK
Sbjct: 243 EFYMGK 248
Score = 142 (55.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1465 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSLECILKIIAFGV 1524
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG------NLAALRTFRVLRALKTVAIV 141
+ Y RDAWN DF+ + L +T + ++ NL+ LR FR R +K +
Sbjct: 1525 L----NYFRDAWNVFDFVTV-LGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQG 1579
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1580 YTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1616
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 491 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 546
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 547 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWNSLRNLVVSLLNS 605
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 606 MKSIISLLFLLFLFIVVFALLGMQ 629
Score = 49 (22.3 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
SKGKDI + L VL P I+R+
Sbjct: 1236 SKGKDINTIKSLRVLRVLRPLKTIKRL 1262
>WB|WBGene00001187 [details] [associations]
symbol:egl-19 species:6239 "Caenorhabditis elegans"
[GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA;IDA] [GO:0070588 "calcium ion transmembrane transport"
evidence=IEA;IDA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0018991 "oviposition" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0043051 "regulation of pharyngeal pumping"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0035545 "determination of left/right asymmetry in nervous
system" evidence=IGI] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
GO:GO:0005886 GO:GO:0018991 GO:GO:0043051 GO:GO:0040035
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 HOGENOM:HOG000231529 GeneTree:ENSGT00680000099727
KO:K05315 GO:GO:0035545 EMBL:FO080215 UniGene:Cel.18210 HSSP:Q13933
GeneID:177513 KEGG:cel:CELE_C48A7.1 CTD:177513 NextBio:897154
RefSeq:NP_001023079.1 ProteinModelPortal:Q8MQA1 SMR:Q8MQA1
STRING:Q8MQA1 PRIDE:Q8MQA1 EnsemblMetazoa:C48A7.1b UCSC:C48A7.1a
WormBase:C48A7.1b InParanoid:Q8MQA1 OMA:ASSGMVV ArrayExpress:Q8MQA1
Uniprot:Q8MQA1
Length = 1877
Score = 246 (91.7 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 59/172 (34%), Positives = 97/172 (56%)
Query: 27 NPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTPT---------IESTEVIFTGIY 76
NPIR++ I I+ F I+ I NCI L I P +E+ E +F ++
Sbjct: 75 NPIRKLCISIVEWKPFEFLILFMICANCIALAIYQPYPAQDSDYKNTLLETIEYVFIVVF 134
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGIDLGNLAALRTFRV 131
T E +K++A GF+ YLR+AWN LDFI++ + V+ M I ++ ALR FRV
Sbjct: 135 TIECVLKIVAMGFMFHPSAYLRNAWNILDFIIVVIGLVSTILSKMSIQGFDVKALRAFRV 194
Query: 132 LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR L+ V+ VP L+ ++ A++ ++ L + +L +F + ++A++GL+ GK
Sbjct: 195 LRPLRLVSGVPSLQVVLNAILRAMIPLLHIALLVLFVILIYAIIGLELFCGK 246
Score = 172 (65.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 45/175 (25%), Positives = 89/175 (50%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIEST--------EV 70
+L++L N R ++ H F+ ++ IL + ++ ST +
Sbjct: 777 SLFILSHTNSFRVFCNMVVNHSYFTNAVLFCILVSSAMLAAEDPLQANSTRNMILNYFDY 836
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---LR 127
FT ++T E +KV+ G + ++ R+A+N LD +V+A++ + + ++ LR
Sbjct: 837 FFTSVFTVEITLKVIVFGLVFHKGSFCRNAFNLLDILVVAVSLTSFVLRTDAMSVVKILR 896
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
RVLR L+ + GLK +V VI +VK + +++++T +FA++G+Q +G
Sbjct: 897 VLRVLRPLRAINRAKGLKHVVQCVIVAVKTIGNIMLVTFMLQFMFAIIGVQLFKG 951
Score = 142 (55.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 43/169 (25%), Positives = 86/169 (50%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE-------VIFTGIYT 77
P N ++ + + F I I+ N + + P+ E +IFTG++
Sbjct: 1102 PRNRLQYRVWWFVTSRAFEYVIFLIIVMNTVSLACKHYPSSRGFEDFLDVFNLIFTGVFA 1161
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV--TMG-IDLG--NLAAL---RTF 129
FE+ +K++A L Y+ D WN D +V+ +++ T G ++ G NL ++ R F
Sbjct: 1162 FEAVLKIVA----LNPKNYISDRWNVFDLLVVVGSFIDITYGKLNPGGTNLISINFFRLF 1217
Query: 130 RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RV+R +K ++ G++T++ ++S + L V +L + ++A++G+Q
Sbjct: 1218 RVMRLVKLLSRGEGIRTLLWTFMKSFQALPYVALLIVLLFFIYAVIGMQ 1266
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 33/120 (27%), Positives = 65/120 (54%)
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-FIVIA--LAYVTMGIDLGN---L 123
+ F +++ E +K+ + GF TY +N D F+VI+ L +V + DL +
Sbjct: 510 LFFVILFSMEMLLKMYSLGFT----TYTTSQFNRFDCFVVISSILEFVLVYFDLMKPLGV 565
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ LR+ R+LR K L+ +V +++ S++++ +++L + +FAL+G+Q GK
Sbjct: 566 SVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFLFIVIFALLGMQVFGGK 625
>ZFIN|ZDB-GENE-060531-44 [details] [associations]
symbol:cacna1ba "calcium channel, voltage-dependent,
N type, alpha 1B subunit, a" species:7955 "Danio rerio" [GO:0070588
"calcium ion transmembrane transport" evidence=IEA] [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002077
InterPro:IPR005447 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01631 ZFIN:ZDB-GENE-060531-44 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231530
OrthoDB:EOG48KR9C PANTHER:PTHR10037:SF131 KO:K04849 EMBL:AL929342
EMBL:BX571772 IPI:IPI00504629 RefSeq:NP_001108020.1
UniGene:Dr.124365 Ensembl:ENSDART00000047719 GeneID:555941
KEGG:dre:555941 CTD:555941 InParanoid:A2BHF4 OMA:DILYNAN
NextBio:20881241 Uniprot:A2BHF4
Length = 2312
Score = 247 (92.0 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 60/176 (34%), Positives = 102/176 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM----IMPG---TPT---IEST 68
+L++ N IR+ A I P F I+ TI+ NCI++ +P TP ++ T
Sbjct: 69 SLFIFSEDNIIRKYAKKITECP-FEYMILATIIANCIVLGLEQHLPALDKTPMSKRLDDT 127
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALR 127
E F GI+ FE+ +K++A GF +YLR+ WN +DF+V+ +T+ G D +L LR
Sbjct: 128 EPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTIVGPDF-DLRTLR 186
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL GK
Sbjct: 187 AVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK 242
Score = 215 (80.7 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 50/145 (34%), Positives = 80/145 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-----IMPGTP---TIESTEV 70
++++ +P NP+RR+ YI+ F + I+ I + I + + P ++ +
Sbjct: 1134 SMFIFNPTNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRNNVLKYLDY 1193
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV------TMGIDLGNLA 124
+FTG++TFE +K++ G IL +Y RD WN LDFIV++ A V T G D+ +
Sbjct: 1194 VFTGVFTFEMVIKMVDLGLILHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDISTIK 1253
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVG 149
+LR RVLR LKT+ +P LK G
Sbjct: 1254 SLRVLRVLRPLKTIKRLPKLKLFKG 1278
Score = 136 (52.9 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 40/155 (25%), Positives = 78/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTPT-----IESTEVIFTGIYTFESAVKVMARGF 89
+V P F I+ I N ++++M G P ++ ++FT +++ E +K++A G
Sbjct: 1440 VVSPPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKYLNIVFTVLFSLECILKIIAFG- 1498
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLG----NLAALRTFRVLRALKTVAIVPG 143
YL+DAWN DF+ + L +T + ++ N + LR FR R +K +
Sbjct: 1499 ---PLNYLKDAWNVFDFVTV-LGSITDILVTEINERQLNFSFLRLFRAARLIKLLRQGYT 1554
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1555 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1589
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 38/149 (25%), Positives = 70/149 (46%)
Query: 42 FSLFIITTILTNCILMIMPGTP-----TIESTEVIFTGIYTFESAVKVMARGFILESFTY 96
+++ I + T C+ ++ P + E +F G++ E ++K+ G TY
Sbjct: 489 WTVLCIVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLIEMSLKMYGLG----PRTY 544
Query: 97 LRDAWNWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVG 149
++N DF VI A V G G ++ LR R+LR K L+ +V
Sbjct: 545 FHSSFNCFDFGVIVGSIFEVIWAAVKPGASFG-ISVLRALRLLRIFKVTKYWNSLRNLVV 603
Query: 150 AVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+++ S+K++ ++ L + VFAL+G+Q
Sbjct: 604 SLLNSMKSIISLLFLLFLFIVVFALLGMQ 632
Score = 47 (21.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KGKDI + L VL P I+R+
Sbjct: 1244 TKGKDISTIKSLRVLRVLRPLKTIKRL 1270
>RGD|61922 [details] [associations]
symbol:Scn7a "sodium channel, voltage-gated, type VII, alpha"
species:10116 "Rattus norvegicus" [GO:0005272 "sodium channel
activity" evidence=TAS] [GO:0006814 "sodium ion transport"
evidence=TAS] InterPro:IPR005821 Pfam:PF00520 RGD:61922
GO:GO:0016021 GO:GO:0005272 HOGENOM:HOG000231755 IPI:IPI00948560
EMBL:AJ277392 UniGene:Rn.54541 STRING:Q9ESV8 UCSC:RGD:61922
InParanoid:Q9ESV8 ArrayExpress:Q9ESV8 Genevestigator:Q9ESV8
Uniprot:Q9ESV8
Length = 151
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 52/124 (41%), Positives = 71/124 (57%)
Query: 55 ILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY 113
ILM M P I + E GIYTFE VKV+ARG SF++L D WNWLDF V
Sbjct: 1 ILMCMSNLPEWILAVENTLLGIYTFEILVKVIARGIWAGSFSFLGDLWNWLDFSVTLFEL 60
Query: 114 VTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFA 173
+T L +L +T R LR LK + + GL++IV +++ +K L I L +F L+V +
Sbjct: 61 ITRSSPLSSLPMFKTIRTLRILKIIPLNHGLQSIVVTLVQCLKKLLGAIALALFFLTVSS 120
Query: 174 LMGL 177
L G+
Sbjct: 121 LFGM 124
>UNIPROTKB|F8W760 [details] [associations]
symbol:CACNA1E "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633 PROSITE:PS50222
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 EMBL:AL161734 EMBL:AL160059 EMBL:AL359270
EMBL:AL590998 IPI:IPI00165045 HGNC:HGNC:1392 PANTHER:PTHR10037:SF57
EMBL:AL356500 ProteinModelPortal:F8W760 SMR:F8W760
Ensembl:ENST00000367567 ArrayExpress:F8W760 Bgee:F8W760
Uniprot:F8W760
Length = 1877
Score = 244 (91.0 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 739 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 798
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 799 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALAMSLETNKGRDI 858
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 859 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 918
Query: 181 RGK 183
+GK
Sbjct: 919 KGK 921
Score = 137 (53.3 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +KV+A
Sbjct: 1080 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAF 1139
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1140 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1195
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1196 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1246
Score = 43 (20.2 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 853 NKGRDIKTIKSLRVLRVLRPLKTIKRL 879
>UNIPROTKB|F1S675 [details] [associations]
symbol:CACNA1E "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090273 "regulation of somatostatin secretion"
evidence=IEA] [GO:0061178 "regulation of insulin secretion involved
in cellular response to glucose stimulus" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0019226 "transmission of nerve impulse"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IEA] [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0002027
"regulation of heart rate" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 OMA:HHMSVWE PANTHER:PTHR10037:SF57 EMBL:CU638673
EMBL:CU694875 EMBL:CU855715 Ensembl:ENSSSCT00000016932
Uniprot:F1S675
Length = 2314
Score = 244 (91.0 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIRR YI+ F + I+ I + I + P E +V
Sbjct: 1131 SMFIFSTTNPIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 1190
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 1191 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 1250
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1251 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1310
Query: 181 RGK 183
+GK
Sbjct: 1311 KGK 1313
Score = 244 (91.0 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 61/186 (32%), Positives = 105/186 (56%)
Query: 14 FSATDALWVLDPFNPIRRVAIYILVHPL--FSLFIITTILTNCILMIM----PG---TPT 64
F+ +L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP
Sbjct: 63 FTVNRSLFIFGEDNIVRKYAKKLIDWPPTPFEYMILATIIANCIVLALEQHLPEDDKTPM 122
Query: 65 ---IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDL 120
+E TE F GI+ FE+ +K++A GFI +YLR+ WN +DFIV+ + T G
Sbjct: 123 SRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHF 182
Query: 121 G---NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+L LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL
Sbjct: 183 NTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL 242
Query: 178 QDSRGK 183
+ GK
Sbjct: 243 EFYSGK 248
Score = 136 (52.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +K++A
Sbjct: 1472 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKIIAF 1531
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1532 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1587
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1588 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1638
Score = 43 (20.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1245 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1271
>UNIPROTKB|F1N9I0 [details] [associations]
symbol:CACNA1S "Voltage-dependent L-type calcium channel
subunit alpha-1S" species:9031 "Gallus gallus" [GO:0001501
"skeletal system development" evidence=IEA] [GO:0002074
"extraocular skeletal muscle development" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA] [GO:0006941
"striated muscle contraction" evidence=IEA] [GO:0007029
"endoplasmic reticulum organization" evidence=IEA] [GO:0007520
"myoblast fusion" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0008331 "high voltage-gated calcium
channel activity" evidence=IEA] [GO:0016529 "sarcoplasmic
reticulum" evidence=IEA] [GO:0030315 "T-tubule" evidence=IEA]
[GO:0031674 "I band" evidence=IEA] [GO:0043501 "skeletal muscle
adaptation" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005450 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 PRINTS:PR01634 GO:GO:0030315 GO:GO:0031674
GO:GO:0016529 GO:GO:0007029 GO:GO:0005891 GO:GO:0008331
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
GeneTree:ENSGT00680000099727 PANTHER:PTHR10037:SF105 OMA:PPVMANQ
EMBL:AADN02064014 EMBL:AADN02064015 IPI:IPI00582468
Ensembl:ENSGALT00000001035 Uniprot:F1N9I0
Length = 1865
Score = 242 (90.2 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 60/189 (31%), Positives = 105/189 (55%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI----MPGTPT------IEST 68
AL+ L NP+R+ I I+ F + I+ TI NC+ + MP T +E
Sbjct: 33 ALFCLTLQNPLRKACISIVEWKPFEIIILLTIFANCVALAIYQPMPEDDTNVANSSLEKL 92
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--------- 119
E +F + E+ +K++A GF+ + YLR+ WN LDF +++L VTM ++
Sbjct: 93 EYVFLIFFAIEAMLKIIAYGFLFHTDAYLRNGWNVLDFSIVSLGLVTMTLEQINAKEGGS 152
Query: 120 LG-----NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL 174
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F + ++A+
Sbjct: 153 LGGKGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFMIIIYAI 212
Query: 175 MGLQDSRGK 183
+G + +GK
Sbjct: 213 VGQELFKGK 221
Score = 158 (60.7 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 48/177 (27%), Positives = 88/177 (49%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--TEVI----- 71
+ ++ P N R + I+ F+ FI+ IL + I + ES +++
Sbjct: 779 SFFIFSPTNKFRMLCHRIVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDI 838
Query: 72 -FTGIYTFESAVKVMARGFILESFTYLRDAW-NWLDFIVIALAYVTMGIDLGNLAA---L 126
FT ++T E +K+ G L ++ R W N LD +V +L ++MG + ++ L
Sbjct: 839 GFTSVFTVEIVLKMTGYGAFLHKGSFCR--WFNILDLLVXSL--ISMGFESSTISVVKIL 894
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
R RVLR L+ + GLK +V V ++K + +++++T +FA +G+Q +GK
Sbjct: 895 RVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGK 951
>UNIPROTKB|F1LNB9 [details] [associations]
symbol:Cacna1e "Voltage-dependent R-type calcium channel
subunit alpha-1E" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005449 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633 PROSITE:PS50222 RGD:2246
GO:GO:0005891 GO:GO:0005245 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF57 IPI:IPI01016584 Ensembl:ENSRNOT00000003869
ArrayExpress:F1LNB9 Uniprot:F1LNB9
Length = 1904
Score = 241 (89.9 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 58/183 (31%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NPIR+ YI+ F + I+ I + I + P E +V
Sbjct: 766 SMFIFSTTNPIRKACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDY 825
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDF+V+ A V G D+
Sbjct: 826 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFVVVVGALVAFALANALGTNKGRDI 885
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 886 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 945
Query: 181 RGK 183
+GK
Sbjct: 946 KGK 948
Score = 138 (53.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 35 YILVHPLFSLFIITTILTNCILMIM-----PGTP--TIESTEVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T ++ + FT +++ E +KV+A
Sbjct: 1107 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPWTYELALKYLNIAFTMVFSLECVLKVIAF 1166
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYVTMG----IDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + + ++ N++ L+ FR R +K +
Sbjct: 1167 GFL----NYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKLFRAARLIKLLR 1222
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1223 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1273
Score = 43 (20.2 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 880 NKGRDIKTIKSLRVLRVLRPLKTIKRL 906
>UNIPROTKB|F1NDV2 [details] [associations]
symbol:F1NDV2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 PANTHER:PTHR10037:SF57 EMBL:AADN02034118
EMBL:AADN02034119 EMBL:AADN02034120 EMBL:AADN02034121
IPI:IPI00818290 Ensembl:ENSGALT00000006084 Uniprot:F1NDV2
Length = 2165
Score = 241 (89.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 58/183 (31%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NP+RR YI+ F + I+ I + I + P + +V
Sbjct: 1027 SMFIFSTTNPVRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSDRNKVLRYFDY 1086
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDFIV+ A V G D+
Sbjct: 1087 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFIVVVGALVAFALANALGTNKGRDI 1146
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1147 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1206
Query: 181 RGK 183
+GK
Sbjct: 1207 KGK 1209
Score = 240 (89.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 59/180 (32%), Positives = 103/180 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT---IES 67
+L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP +E
Sbjct: 18 SLFLFGEDNIVRKYAKKLIDWPYPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEK 77
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG---NL 123
TE F GI+ FE+ +K++A GF+ +YLR+ WN +DFIV+ + T G +L
Sbjct: 78 TEPYFIGIFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDL 137
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 138 RTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGK 197
Score = 137 (53.3 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +K++A
Sbjct: 1368 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMVFSLECVLKIIAF 1427
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYV----TMGIDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + T ++ N++ L+ FR R +K +
Sbjct: 1428 GFL----NYFRDTWNIFDFITVIGSITEIILTDTKLVNTSSFNMSFLKLFRAARLIKLLR 1483
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1484 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1534
Score = 43 (20.2 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1141 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1167
>UNIPROTKB|F1NFD2 [details] [associations]
symbol:F1NFD2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005449 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01633 PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 PANTHER:PTHR10037:SF57 EMBL:AADN02034118
EMBL:AADN02034119 EMBL:AADN02034120 EMBL:AADN02034121
IPI:IPI00575036 Ensembl:ENSGALT00000039679 Uniprot:F1NFD2
Length = 2184
Score = 241 (89.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 58/183 (31%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NP+RR YI+ F + I+ I + I + P + +V
Sbjct: 1046 SMFIFSTTNPVRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSDRNKVLRYFDY 1105
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDFIV+ A V G D+
Sbjct: 1106 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFIVVVGALVAFALANALGTNKGRDI 1165
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1166 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1225
Query: 181 RGK 183
+GK
Sbjct: 1226 KGK 1228
Score = 240 (89.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 59/180 (32%), Positives = 103/180 (57%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM----PG---TPT---IES 67
+L++ N +R+ A ++ P F I+ TI+ NCI++ + P TP +E
Sbjct: 18 SLFLFGEDNIVRKYAKKLIDWPYPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEK 77
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYV-TMGIDLG---NL 123
TE F GI+ FE+ +K++A GF+ +YLR+ WN +DFIV+ + T G +L
Sbjct: 78 TEPYFIGIFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDL 137
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR LK V+ +P L+ ++ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 138 RTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGK 197
Score = 137 (53.3 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +K++A
Sbjct: 1387 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMVFSLECVLKIIAF 1446
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYV----TMGIDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + T ++ N++ L+ FR R +K +
Sbjct: 1447 GFL----NYFRDTWNIFDFITVIGSITEIILTDTKLVNTSSFNMSFLKLFRAARLIKLLR 1502
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1503 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1553
Score = 43 (20.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1160 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1186
>UNIPROTKB|F1NFD4 [details] [associations]
symbol:F1NFD4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002027
"regulation of heart rate" evidence=IEA] [GO:0005245 "voltage-gated
calcium channel activity" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0019226 "transmission of nerve impulse" evidence=IEA]
[GO:0019233 "sensory perception of pain" evidence=IEA] [GO:0030317
"sperm motility" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0061178 "regulation of insulin secretion involved
in cellular response to glucose stimulus" evidence=IEA] [GO:0090273
"regulation of somatostatin secretion" evidence=IEA]
InterPro:IPR002048 InterPro:IPR002077 InterPro:IPR005449
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01633
PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 OMA:HHMSVWE PANTHER:PTHR10037:SF57 EMBL:AADN02034118
EMBL:AADN02034119 EMBL:AADN02034120 EMBL:AADN02034121
IPI:IPI00820292 Ensembl:ENSGALT00000039677 Uniprot:F1NFD4
Length = 2187
Score = 241 (89.9 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 58/183 (31%), Positives = 99/183 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTEV------ 70
++++ NP+RR YI+ F + I+ I + I + P + +V
Sbjct: 1006 SMFIFSTTNPVRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSDRNKVLRYFDY 1065
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM----------GIDL 120
+FTG++TFE +K++ +G IL+ +Y RD WN LDFIV+ A V G D+
Sbjct: 1066 VFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFIVVVGALVAFALANALGTNKGRDI 1125
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDS 180
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ + +FA++ +Q
Sbjct: 1126 KTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLF 1185
Query: 181 RGK 183
+GK
Sbjct: 1186 KGK 1188
Score = 231 (86.4 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 54/156 (34%), Positives = 91/156 (58%)
Query: 42 FSLFIITTILTNCILMIM----PG---TPT---IESTEVIFTGIYTFESAVKVMARGFIL 91
F I+ TI+ NCI++ + P TP +E TE F GI+ FE+ +K++A GF+
Sbjct: 2 FEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFVF 61
Query: 92 ESFTYLRDAWNWLDFIVIALAYV-TMGIDLG---NLAALRTFRVLRALKTVAIVPGLKTI 147
+YLR+ WN +DFIV+ + T G +L LR RVLR LK V+ +P L+ +
Sbjct: 62 HKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSLQIV 121
Query: 148 VGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+ ++++++ L + +L F++ +FA++GL+ GK
Sbjct: 122 LKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGK 157
Score = 137 (53.3 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 35 YILVHPLFSLFIITTILTNCILMIMP--GTP-TIEST----EVIFTGIYTFESAVKVMAR 87
+ +V P F I+ I N ++++M P T E + FT +++ E +K++A
Sbjct: 1347 HFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMVFSLECVLKIIAF 1406
Query: 88 GFILESFTYLRDAWNWLDFIVI--ALAYV----TMGIDLG--NLAALRTFRVLRALKTVA 139
GF+ Y RD WN DFI + ++ + T ++ N++ L+ FR R +K +
Sbjct: 1407 GFL----NYFRDTWNIFDFITVIGSITEIILTDTKLVNTSSFNMSFLKLFRAARLIKLLR 1462
Query: 140 IVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE-SH 189
++ ++ ++S K L V +L ++A++G+Q K DE SH
Sbjct: 1463 QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEESH 1513
Score = 43 (20.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV 32
+KG+DI + L VL P I+R+
Sbjct: 1120 NKGRDIKTIKSLRVLRVLRPLKTIKRL 1146
>UNIPROTKB|E2R2V3 [details] [associations]
symbol:E2R2V3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA] InterPro:IPR002048 InterPro:IPR002077
InterPro:IPR005447 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01631 PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF131 Ensembl:ENSCAFT00000030804 Uniprot:E2R2V3
Length = 2330
Score = 241 (89.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 53/153 (34%), Positives = 92/153 (60%)
Query: 42 FSLFIITTILTNCILMIM----PG---TPT---IESTEVIFTGIYTFESAVKVMARGFIL 91
F I+ TI+ NCI++ + P TP ++ TE F GI+ FE+ +K++A GF+
Sbjct: 80 FEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVF 139
Query: 92 ESFTYLRDAWNWLDFIVIALAYV-TMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGA 150
+YLR+ WN +DF+V+ + T G D +L LR RVLR LK V+ +P L+ ++ +
Sbjct: 140 HKGSYLRNGWNVMDFVVVLTGILATAGTDF-DLRTLRAVRVLRPLKLVSGIPSLQVVLKS 198
Query: 151 VIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
+++++ L + +L F++ +FA++GL+ GK
Sbjct: 199 IMKAMVPLLQIGLLLFFAILMFAIIGLEFYMGK 231
Score = 224 (83.9 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 47/134 (35%), Positives = 78/134 (58%)
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM--- 116
P ++ + IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V
Sbjct: 1169 PRNNALKYMDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFS 1228
Query: 117 -------GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
G D+ + +LR RVLR LKT+ +P LK + V+ S+KN+ +++++ M +
Sbjct: 1229 SFMGGSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILVVYMLFM 1288
Query: 170 SVFALMGLQDSRGK 183
+FA++ +Q +GK
Sbjct: 1289 FIFAVIAVQLFKGK 1302
Score = 186 (70.5 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 53/171 (30%), Positives = 90/171 (52%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 1120 SMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSPRNNALKYMDY 1179
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT------MGIDLG-NL 123
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V MG G ++
Sbjct: 1180 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDI 1239
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN-LRDVI-ILTMFSLSVF 172
+ +++ RVLR L+ + + L + AV + V N L++V+ IL ++ L +F
Sbjct: 1240 STIKSLRVLRVLRPLKTIKRLPKLK-AVFDCVVNSLKNVLNILVVYMLFMF 1289
Score = 147 (56.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 1463 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 1522
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 1523 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 1577
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1578 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 1612
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 47 ITTILTNCILMIMPGTPTIEST-----EVIFTGIYTFESAVKVMARGFILESFTYLRDAW 101
+ + T C+ M+ P +T E +F G++ E ++K+ G +Y R ++
Sbjct: 475 VVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLG----PRSYFRSSF 530
Query: 102 NWLDFIVIA-------LAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
N DF VI A + G G ++ LR R+LR K L+ +V +++ S
Sbjct: 531 NCFDFGVIVGSIFEVVWAAIKPGTSFG-ISVLRALRLLRIFKVTKYWSSLRNLVVSLLNS 589
Query: 155 VKNLRDVIILTMFSLSVFALMGLQ 178
+K++ ++ L + VFAL+G+Q
Sbjct: 590 MKSIISLLFLLFLFIVVFALLGMQ 613
Score = 52 (23.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
+F+ SKGKDI + L VL P I+R+
Sbjct: 1229 SFMGGSKGKDISTIKSLRVLRVLRPLKTIKRL 1260
>UNIPROTKB|F1N8H9 [details] [associations]
symbol:Gga.561 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005216
GeneTree:ENSGT00560000076721 EMBL:AADN02000266 EMBL:AADN02000267
IPI:IPI00679775 Ensembl:ENSGALT00000031282 ArrayExpress:F1N8H9
Uniprot:F1N8H9
Length = 207
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 108 VIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMF 167
VI +A+V +LG+++ LRTFRVLRALKT+++VPGLK IVGA+I+SVK L +V+ILT+F
Sbjct: 2 VIIMAFVGAFSNLGSVSVLRTFRVLRALKTISVVPGLKIIVGALIQSVKKLANVMILTVF 61
Query: 168 SLSVFALMGLQDSRG 182
LSVFAL+GLQ +G
Sbjct: 62 CLSVFALIGLQLFKG 76
>ZFIN|ZDB-GENE-090514-1 [details] [associations]
symbol:cacna1sa "calcium channel, voltage-dependent,
L type, alpha 1S subunit, a" species:7955 "Danio rerio" [GO:0070588
"calcium ion transmembrane transport" evidence=IEA] [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005450
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01634 PROSITE:PS50222 ZFIN:ZDB-GENE-090514-1 GO:GO:0005891
GO:GO:0005245 eggNOG:COG1226 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 HOGENOM:HOG000231529 GeneTree:ENSGT00680000099727
PANTHER:PTHR10037:SF105 KO:K04857 EMBL:FP016205 EMBL:FP067424
EMBL:FP101907 EMBL:FJ769223 IPI:IPI00928857 RefSeq:NP_001139622.1
UniGene:Dr.88008 STRING:C0LU14 Ensembl:ENSDART00000105895
GeneID:570683 KEGG:dre:570683 CTD:570683 OrthoDB:EOG4BP19W
NextBio:20890250 Uniprot:C0LU14
Length = 1777
Score = 238 (88.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 58/178 (32%), Positives = 97/178 (54%)
Query: 27 NPIRRVAIYILVHPLFSLFIITTILTNCI----LMIMPGTPT------IESTEVIFTGIY 76
NP R+ I I+ F + I+ TI NC+ M MP T +ES E IF I+
Sbjct: 50 NPFRKACINIVEWKPFEIIILLTIFANCVALAVFMPMPEEDTNNTNSNLESLEYIFLIIF 109
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-------------- 122
T E +K++A GF+ + YLR+ WN LDF+++ + T+ +D N
Sbjct: 110 TMECFLKIVAYGFLFHADAYLRNCWNILDFVIVTMGLFTVVVDFINSISGVEAPVEQKGG 169
Query: 123 --LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ ALR FRVLR L+ V+ VP L+ ++ ++++S+ L + +L F ++++A++GL+
Sbjct: 170 FDMKALRAFRVLRPLRLVSGVPSLQVVMSSILKSMLPLFHISLLVFFMVTIYAIIGLE 227
Score = 184 (69.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/176 (27%), Positives = 93/176 (52%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTP------TIESTEV 70
A ++ P N R++ I+ F+ I+ IL + I + P P + +
Sbjct: 790 AFFLFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPMSFRNQVLAYADY 849
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---LR 127
+FT ++T E +K+ G L ++ R+++N LD IV+ ++ ++MG++ ++ LR
Sbjct: 850 VFTSVFTAEIVLKMTTYGAFLHKGSFCRNSFNILDLIVVGVSLLSMGMESSAISVVKILR 909
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR L+ + GLK +V V ++K + +++++TM +FA +G+Q +GK
Sbjct: 910 VLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACIGVQLFKGK 965
>UNIPROTKB|I3LA90 [details] [associations]
symbol:I3LA90 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR005821
Pfam:PF00520 GO:GO:0016021 GO:GO:0005216 EMBL:CU468079
Ensembl:ENSSSCT00000030217 GeneTree:ENSGT00690000103486
Uniprot:I3LA90
Length = 70
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 44 LFIITTILTNCILMIMPGTPT-IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWN 102
+ I+ TILTNC+ M M P ++ E FTGIYTFES +K++ARGF LE FT+LRD WN
Sbjct: 1 MLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWN 60
Query: 103 WLDFIVIALA 112
WLDF VI A
Sbjct: 61 WLDFTVITFA 70
>MGI|MGI:1859639 [details] [associations]
symbol:Cacna1f "calcium channel, voltage-dependent, alpha 1F
subunit" species:10090 "Mus musculus" [GO:0001750 "photoreceptor
outer segment" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=ISO;IMP] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP] [GO:0007601
"visual perception" evidence=ISO;IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=ISO]
[GO:0034765 "regulation of ion transmembrane transport"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043204 "perikaryon" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=ISO] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0070588 "calcium ion transmembrane transport"
evidence=IMP] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
MGI:MGI:1859639 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 Reactome:REACT_127416 GO:GO:0048813 GO:GO:0060041
GO:GO:0006874 GO:GO:0007409 GO:GO:0005891 GO:GO:0005245
eggNOG:COG1226 InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763
Pfam:PF08763 HOGENOM:HOG000231529 EMBL:AF192497 IPI:IPI00121007
UniGene:Mm.289647 ProteinModelPortal:Q9JIS7 SMR:Q9JIS7
STRING:Q9JIS7 PhosphoSite:Q9JIS7 PRIDE:Q9JIS7 Genevestigator:Q9JIS7
GermOnline:ENSMUSG00000031142 Uniprot:Q9JIS7
Length = 1985
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 841 VVPKEK-VVPIPEGSAFFCLSQTNPLRKACHTLIHHHIFTSLILVFIILSSVSLAAEDPI 899
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 900 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLIS 959
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 960 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1019
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1020 ACIGVQLFKGK 1030
Score = 158 (60.7 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NPIRR I I+ F + I+ TI NC+ + +P +E
Sbjct: 71 ALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQV 130
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T E+ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 131 EYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 183
Score = 119 (46.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV-------IALA 112
P ++ ++FTG++T E +K++A + Y DAWN D ++ IA+
Sbjct: 1222 PFNYAMDILNMVFTGLFTIEMVLKIIA----FKPKHYFADAWNTFDALIVVGSVVDIAVT 1277
Query: 113 YVTMGIDLG---------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
V G LG ++ R FRV+R +K ++ G++T++ I+S + L V +
Sbjct: 1278 EVNNGGHLGESSEDTSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVAL 1337
Query: 164 LTMFSLSVFALMGLQ 178
L ++A++G+Q
Sbjct: 1338 LIAMIFFIYAVIGMQ 1352
Score = 107 (42.7 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 20/57 (35%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L +V ++++++ L + +L +F + ++A++GL+
Sbjct: 201 DVKALRAFRVLRPLRLVSGVPSLHIVVNSIMKALVPLLHIALLVLFVIIIYAIIGLE 257
Score = 63 (27.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIIL--------TMFSLSVFA 173
++ R FRV+R +K ++ G++T++ I+S + L V +L + + +F
Sbjct: 1296 SITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFIYAVIGMQMFG 1355
Query: 174 LMGLQD 179
L+ LQD
Sbjct: 1356 LVALQD 1361
Score = 38 (18.4 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFN 27
+F++ G D+ R + LWV FN
Sbjct: 1048 SFLIYPDG-DVSRPLVRERLWVNSDFN 1073
>ZFIN|ZDB-GENE-051227-1 [details] [associations]
symbol:cacna1sb "calcium channel, voltage-dependent,
L type, alpha 1S subunit, b" species:7955 "Danio rerio" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0070588 "calcium ion
transmembrane transport" evidence=IEA] [GO:0005245 "voltage-gated
calcium channel activity" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005244 "voltage-gated ion channel activity" evidence=IEA]
[GO:0034765 "regulation of ion transmembrane transport"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0006816 "calcium ion transport" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005450
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01634 ZFIN:ZDB-GENE-051227-1 GO:GO:0005891 GO:GO:0005245
eggNOG:COG1226 InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763
Pfam:PF08763 HOGENOM:HOG000231529 GeneTree:ENSGT00680000099727
PANTHER:PTHR10037:SF105 KO:K04857 OrthoDB:EOG45755Q EMBL:BX544876
EMBL:AY495698 IPI:IPI00493269 RefSeq:NP_999891.1 UniGene:Dr.85264
SMR:Q6RKB0 STRING:Q6RKB0 Ensembl:ENSDART00000062406 GeneID:405791
KEGG:dre:405791 CTD:405791 InParanoid:Q6RKB0 NextBio:20817757
Uniprot:Q6RKB0
Length = 1847
Score = 234 (87.4 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 57/176 (32%), Positives = 96/176 (54%)
Query: 27 NPIRRVAIYILVHPLFSLFIITTILTNCILMI----MPGTPT------IESTEVIFTGIY 76
NP R+ I+ F + I+ TI NC+ + MP T +ES E IF I+
Sbjct: 61 NPFRKACTNIVEWKPFEIIILLTIFANCVALAVFLPMPEEDTNNTNLTLESLEYIFLVIF 120
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-----G---------N 122
T E +K++A G + YLR+ WN LDF+++ + T+ +D G +
Sbjct: 121 TLECFLKIIAYGLLFHEGAYLRNCWNILDFVIVFMGLFTLVVDTIDTITGVQKEKGGGFD 180
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ ALR FRVLR L+ V+ VP L+ ++ +V++S+ L +++L F ++++A+MGL+
Sbjct: 181 MKALRAFRVLRPLRLVSGVPSLQVVMSSVLKSMLPLFHILLLVFFMVTIYAIMGLE 236
Score = 191 (72.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 46/175 (26%), Positives = 95/175 (54%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTP------TIESTEV 70
+ ++ P N R++ I+ H F+ I+ IL + I + P P + ++
Sbjct: 798 SFFIFGPQNKFRKLCHRIINHTTFTNIILLFILLSSISLAAEDPIDPHSFRNKVLAYADI 857
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---LR 127
+FT ++T E +K+ G L ++ R+++N LD IV+A++ ++MG++ ++ LR
Sbjct: 858 VFTTVFTIEIVLKMTVYGAFLHPGSFCRNSFNILDLIVVAVSLLSMGMESSTISVVKILR 917
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
RVLR L+ + GLK +V + ++K + +++++TM +F+ +G+Q +G
Sbjct: 918 VLRVLRPLRAINRAKGLKHVVQCMFVAIKTIGNIVLVTMLLDFMFSCIGVQLFKG 972
>RGD|621535 [details] [associations]
symbol:Cacna1f "calcium channel, voltage-dependent, L type, alpha
1F subunit" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005245
"voltage-gated calcium channel activity" evidence=ISO] [GO:0005891
"voltage-gated calcium channel complex" evidence=ISO] [GO:0006874
"cellular calcium ion homeostasis" evidence=ISO] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0007409
"axonogenesis" evidence=ISO] [GO:0007601 "visual perception"
evidence=IEP;ISO] [GO:0008331 "high voltage-gated calcium channel
activity" evidence=IC] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0048813 "dendrite
morphogenesis" evidence=ISO] [GO:0050908 "detection of light
stimulus involved in visual perception" evidence=ISO] [GO:0060041
"retina development in camera-type eye" evidence=ISO] [GO:0070588
"calcium ion transmembrane transport" evidence=ISO]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630 RGD:621535 GO:GO:0016021
GO:GO:0043204 GO:GO:0007601 GO:GO:0007269 GO:GO:0005891
GO:GO:0005245 InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763
Pfam:PF08763 HOGENOM:HOG000231529 CTD:778 KO:K04853 HSSP:Q13933
EMBL:AF365975 IPI:IPI00950346 RefSeq:NP_446153.1 UniGene:Rn.39125
ProteinModelPortal:Q923Z7 SMR:Q923Z7 STRING:Q923Z7 GeneID:114493
KEGG:rno:114493 UCSC:RGD:621535 InParanoid:Q923Z7 NextBio:618533
Genevestigator:Q923Z7 Uniprot:Q923Z7
Length = 1981
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 835 VVPKEK-VVPIPEGSAFFCLSQTNPLRKACHTLIHHHVFTSLILVFIILSSVSLAAEDPI 893
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 894 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHQGSFCRSWFNLLDLLVVSVSLIS 953
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 954 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1013
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1014 ACIGVQLFKGK 1024
Score = 159 (61.0 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 36/113 (31%), Positives = 61/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NPIRR I I+ F + I+ TI NC+ + +P T +E
Sbjct: 71 ALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTATHNLEQV 130
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T ++ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 131 EYVFLVIFTVKTVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 183
Score = 120 (47.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV-------IALA 112
P ++ ++FTG++T E +K++A + Y DAWN D ++ IA+
Sbjct: 1216 PFNYAMDILNMVFTGLFTVEMVLKIIA----FKPKHYFADAWNTFDALIVVGSVVDIAVT 1271
Query: 113 YVTMGIDLG---------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
V G LG ++ R FRV+R +K ++ G++T++ I+S + L V +
Sbjct: 1272 EVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPHVAL 1331
Query: 164 LTMFSLSVFALMGLQ 178
L ++A++G+Q
Sbjct: 1332 LIAMIFFIYAVIGMQ 1346
Score = 104 (41.7 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 19/57 (33%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 201 DVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLE 257
Score = 38 (18.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFN 27
+F++ G D+ R + LWV FN
Sbjct: 1042 SFLIYPDG-DVSRPLVRERLWVNSDFN 1067
>UNIPROTKB|D3ZZF4 [details] [associations]
symbol:Cacna1f "Protein Cacna1f" species:10116 "Rattus
norvegicus" [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
RGD:621535 GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 IPI:IPI00569948
Ensembl:ENSRNOT00000051152 ArrayExpress:D3ZZF4 Uniprot:D3ZZF4
Length = 1976
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 835 VVPKEK-VVPIPEGSAFFCLSQTNPLRKACHTLIHHHVFTSLILVFIILSSVSLAAEDPI 893
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 894 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHQGSFCRSWFNLLDLLVVSVSLIS 953
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 954 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1013
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1014 ACIGVQLFKGK 1024
Score = 158 (60.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NPIRR I I+ F + I+ TI NC+ + +P +E
Sbjct: 71 ALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQV 130
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T E+ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 131 EYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 183
Score = 118 (46.6 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV-------IALA 112
P ++ ++FTG++T E +K++A + Y DAWN D ++ IA+
Sbjct: 1216 PFNYAMDILNMVFTGLFTVEMVLKIIA----FKPKHYFADAWNTFDALIVVGSVVDIAVT 1271
Query: 113 YVTMGIDLG---------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
V G LG ++ R FRV+R +K ++ G++T++ I+S + L V +
Sbjct: 1272 EVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVAL 1331
Query: 164 LTMFSLSVFALMGLQ 178
L ++A++G+Q
Sbjct: 1332 LIAMIFFIYAVIGMQ 1346
Score = 104 (41.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 19/57 (33%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 201 DVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLE 257
Score = 38 (18.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFN 27
+F++ G D+ R + LWV FN
Sbjct: 1042 SFLIYPDG-DVSRPLVRERLWVNSDFN 1067
>UNIPROTKB|G3V9W8 [details] [associations]
symbol:Cacna1f "RCG22871, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IEA] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
RGD:621535 GO:GO:0005891 GO:GO:0005245 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763 EMBL:CH474078
ProteinModelPortal:G3V9W8 Ensembl:ENSRNOT00000066489 Uniprot:G3V9W8
Length = 1980
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 835 VVPKEK-VVPIPEGSAFFCLSQTNPLRKACHTLIHHHVFTSLILVFIILSSVSLAAEDPI 893
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 894 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHQGSFCRSWFNLLDLLVVSVSLIS 953
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 954 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1013
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1014 ACIGVQLFKGK 1024
Score = 158 (60.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NPIRR I I+ F + I+ TI NC+ + +P +E
Sbjct: 71 ALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQV 130
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T E+ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 131 EYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 183
Score = 118 (46.6 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV-------IALA 112
P ++ ++FTG++T E +K++A + Y DAWN D ++ IA+
Sbjct: 1216 PFNYAMDILNMVFTGLFTVEMVLKIIA----FKPKHYFADAWNTFDALIVVGSVVDIAVT 1271
Query: 113 YVTMGIDLG---------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
V G LG ++ R FRV+R +K ++ G++T++ I+S + L V +
Sbjct: 1272 EVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVAL 1331
Query: 164 LTMFSLSVFALMGLQ 178
L ++A++G+Q
Sbjct: 1332 LIAMIFFIYAVIGMQ 1346
Score = 104 (41.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 19/57 (33%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 201 DVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLE 257
Score = 38 (18.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFN 27
+F++ G D+ R + LWV FN
Sbjct: 1042 SFLIYPDG-DVSRPLVRERLWVNSDFN 1067
>UNIPROTKB|D4A799 [details] [associations]
symbol:Cacna1f "Protein Cacna1f" species:10116 "Rattus
norvegicus" [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
RGD:621535 GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 IPI:IPI00952131
Ensembl:ENSRNOT00000067941 ArrayExpress:D4A799 Uniprot:D4A799
Length = 1984
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 839 VVPKEK-VVPIPEGSAFFCLSQTNPLRKACHTLIHHHVFTSLILVFIILSSVSLAAEDPI 897
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 898 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHQGSFCRSWFNLLDLLVVSVSLIS 957
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 958 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1017
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1018 ACIGVQLFKGK 1028
Score = 158 (60.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NPIRR I I+ F + I+ TI NC+ + +P +E
Sbjct: 71 ALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQV 130
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T E+ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 131 EYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 183
Score = 131 (51.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 43/171 (25%), Positives = 81/171 (47%)
Query: 25 PFNPIRRVAIYILVHPL-FSLFIITTILTNCILMIM-------PGTPTIESTEVIFTGIY 76
P NP + ++ V+ F + IL N + + M P ++ ++FTG++
Sbjct: 1178 PKNP-HQYRVWATVNSAAFEYLMFLLILLNTVALAMQHYEQTAPFNYAMDILNMVFTGLF 1236
Query: 77 TFESAVKVMARGFILESFTYLRDAWNWLDFIV-------IALAYVTMGIDLGNLAA--LR 127
T E +K++A + Y DAWN D ++ IA+ V D ++ R
Sbjct: 1237 TVEMVLKIIA----FKPKHYFADAWNTFDALIVVGSVVDIAVTEVNSSEDSSRISITFFR 1292
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
FRV+R +K ++ G++T++ I+S + L V +L ++A++G+Q
Sbjct: 1293 LFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFIYAVIGMQ 1343
Score = 104 (41.7 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 19/57 (33%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 201 DVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLE 257
Score = 38 (18.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFN 27
+F++ G D+ R + LWV FN
Sbjct: 1046 SFLIYPDG-DVSRPLVRERLWVNSDFN 1071
>ZFIN|ZDB-GENE-031104-1 [details] [associations]
symbol:cacna1f "calcium channel, voltage-dependent,
alpha 1F subunit" species:7955 "Danio rerio" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0034765 "regulation
of ion transmembrane transport" evidence=IEA] [GO:0005262 "calcium
channel activity" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005244 "voltage-gated ion
channel activity" evidence=IEA] InterPro:IPR002077
InterPro:IPR005446 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 ZFIN:ZDB-GENE-031104-1 GO:GO:0005891 GO:GO:0005245
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
GeneTree:ENSGT00680000099727 EMBL:BX072561 IPI:IPI00890437
Ensembl:ENSDART00000041564 Bgee:F1QH36 Uniprot:F1QH36
Length = 2126
Score = 157 (60.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 33/114 (28%), Positives = 63/114 (55%)
Query: 16 ATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-IMPGTPT---------I 65
A AL+ L NPIRR A++++ F +FI+ I NC+ + + P +
Sbjct: 22 APRALYCLKLNNPIRRAALHLVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNATNHDL 81
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID 119
E E +F I+T E+ +K++A G ++ +Y+R+ WN LDF+++ + ++ ++
Sbjct: 82 EQVEYVFLIIFTIETFLKILAYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLE 135
Score = 157 (60.3 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 49/178 (27%), Positives = 89/178 (50%)
Query: 19 ALWVLDPFNPIRRVAIYILVHP-LFSLFIITTILTNCILMIMPGTPTIES--------TE 69
A + L NPIR V + L+H +F+ I+ I+ + I + S +
Sbjct: 831 AFFCLSKTNPIR-VGCHTLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNVLGYAD 889
Query: 70 VIFTGIYTFESAVKVMA-RGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA--- 125
FT I+T E +KVM G L ++ R+ +N LD +V++++ V+ + ++
Sbjct: 890 YAFTSIFTVEILLKVMTVHGAFLHEGSFCRNWFNLLDLLVVSVSLVSFFLHSSAISVVKI 949
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK I+ +++ + +++I+T +FA +G+Q +GK
Sbjct: 950 LRVLRVLRPLRAINRAKGLKHIIYRKFVNIRTIGNIMIVTTLLQFMFACIGVQLFKGK 1007
Score = 105 (42.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 19/57 (33%), Positives = 41/57 (71%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L+ ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 156 DVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLE 212
>UNIPROTKB|O60840 [details] [associations]
symbol:CACNA1F "Voltage-dependent L-type calcium channel
subunit alpha-1F" species:9606 "Homo sapiens" [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0007601 "visual perception" evidence=IMP]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IDA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630 Reactome:REACT_111045
GO:GO:0007411 GO:GO:0046872 Orphanet:1872 GO:GO:0048813
GO:GO:0060041 GO:GO:0006874 GO:GO:0050908 GO:GO:0005891
GO:GO:0005245 Orphanet:215 eggNOG:COG1226 InterPro:IPR014873
SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231529
DrugBank:DB00661 EMBL:AJ006216 EMBL:AF067227 EMBL:AJ224874
EMBL:AF201304 EMBL:AF196779 EMBL:AF235097 EMBL:U93305
IPI:IPI00465135 IPI:IPI00925706 RefSeq:NP_001243718.1
RefSeq:NP_001243719.1 RefSeq:NP_005174.2 UniGene:Hs.632799
ProteinModelPortal:O60840 SMR:O60840 IntAct:O60840 STRING:O60840
TCDB:1.A.1.11.11 PhosphoSite:O60840 PaxDb:O60840 PRIDE:O60840
Ensembl:ENST00000323022 Ensembl:ENST00000376251
Ensembl:ENST00000376265 GeneID:778 KEGG:hsa:778 UCSC:uc004dnb.3
CTD:778 GeneCards:GC0XM049061 HGNC:HGNC:1393 MIM:300071 MIM:300110
MIM:300476 MIM:300600 neXtProt:NX_O60840 Orphanet:178333
PharmGKB:PA26010 KO:K04853 OMA:HKTVAVA OrthoDB:EOG4W3SM2
BindingDB:O60840 ChEMBL:CHEMBL5593 GenomeRNAi:778 NextBio:3144
ArrayExpress:O60840 Bgee:O60840 CleanEx:HS_CACNA1F
Genevestigator:O60840 GermOnline:ENSG00000102001 Uniprot:O60840
Length = 1977
Score = 169 (64.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 836 VVPKEK-VVPIPEGSAFFCLSQTNPLRKGCHTLIHHHVFTNLILVFIILSSVSLAAEDPI 894
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 895 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNMLDLLVVSVSLIS 954
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 955 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1014
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1015 ACIGVQLFKGK 1025
Score = 156 (60.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 35/113 (30%), Positives = 60/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NP+RR I I+ F + I+ TI NC+ + +P +E
Sbjct: 71 ALFCLTLANPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQV 130
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T E+ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 131 EYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 183
Score = 119 (46.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 36/135 (26%), Positives = 67/135 (49%)
Query: 60 PGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIV-------IALA 112
P ++ ++FTG++T E +K++A + Y DAWN D ++ IA+
Sbjct: 1217 PFNYAMDILNMVFTGLFTIEMVLKIIA----FKPKHYFTDAWNTFDALIVVGSIVDIAVT 1272
Query: 113 YVTMGIDLG---------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII 163
V G LG ++ R FRV+R +K ++ G++T++ I+S + L V +
Sbjct: 1273 EVNNGGHLGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVAL 1332
Query: 164 LTMFSLSVFALMGLQ 178
L ++A++G+Q
Sbjct: 1333 LIAMIFFIYAVIGMQ 1347
Score = 104 (41.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 19/57 (33%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 201 DVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLE 257
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFN 27
+F+V G D+ R + LWV FN
Sbjct: 1043 SFLVYPDG-DVSRPLVRERLWVNSDFN 1068
>UNIPROTKB|E2QZA3 [details] [associations]
symbol:CACNA1F "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 Ensembl:ENSCAFT00000025182 Uniprot:E2QZA3
Length = 1985
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 836 VVPKEK-VVPIPEGSAFFCLSQTNPLRKACHTLIHHHIFTNLILVFIILSSVSLAAEDPI 894
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 895 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLIS 954
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 955 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1014
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1015 ACIGVQLFKGK 1025
Score = 156 (60.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 35/113 (30%), Positives = 60/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NP+RR I I+ F + I+ TI NC+ + +P +E
Sbjct: 72 ALFCLTLANPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQV 131
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T E+ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 132 EYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 184
Score = 104 (41.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 19/57 (33%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 202 DVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLE 258
>UNIPROTKB|F6XU71 [details] [associations]
symbol:CACNA1F "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
GO:GO:0005891 GO:GO:0005245 GeneTree:ENSGT00680000099892
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763 OMA:HKTVAVA
Ensembl:ENSCAFT00000025182 EMBL:AAEX03026343 EMBL:AAEX03026344
Uniprot:F6XU71
Length = 1985
Score = 172 (65.6 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 49/191 (25%), Positives = 93/191 (48%)
Query: 4 VVSKGKDIFRFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP 63
VV K K + A + L NP+R+ ++ H +F+ I+ I+ + + +
Sbjct: 836 VVPKEK-VVPIPEGSAFFCLSQTNPLRKACHTLIHHHIFTNLILVFIILSSVSLAAEDPI 894
Query: 64 TIEST--------EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVT 115
S + FT I+T E +K+ G L ++ R +N LD +V++++ ++
Sbjct: 895 RAHSFRNHILGYFDYAFTSIFTVEILLKMTVFGAFLHRGSFCRSWFNLLDLLVVSVSLIS 954
Query: 116 MGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVF 172
GI ++ LR RVLR L+ + GLK +V V +++ + +++I+T +F
Sbjct: 955 FGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMF 1014
Query: 173 ALMGLQDSRGK 183
A +G+Q +GK
Sbjct: 1015 ACIGVQLFKGK 1025
Score = 156 (60.0 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 35/113 (30%), Positives = 60/113 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM--IMP--------GTPTIEST 68
AL+ L NP+RR I I+ F + I+ TI NC+ + +P +E
Sbjct: 72 ALFCLTLANPLRRSCISIVEWKPFDILILLTIFANCVALGVYIPFPEDDSNTANHNLEQV 131
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E +F I+T E+ +K++A G +L Y+R+ WN LDFI++ + ++ ++ G
Sbjct: 132 EYVFLVIFTVETVLKIVAYGLVLHPSAYIRNGWNLLDFIIVVVGLFSVLLEQG 184
Score = 104 (41.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 19/57 (33%), Positives = 40/57 (70%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L ++ ++++++ L + +L +F + ++A++GL+
Sbjct: 202 DVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKALVPLLHIALLVLFVIIIYAIIGLE 258
>UNIPROTKB|E9PDR3 [details] [associations]
symbol:CACNA1B "Voltage-dependent N-type calcium channel
subunit alpha-1B" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] InterPro:IPR002048
InterPro:IPR005447 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01631
PROSITE:PS50222 GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 PANTHER:PTHR10037:SF131 EMBL:AL591424
EMBL:AL772363 HGNC:HGNC:1389 IPI:IPI00645750
ProteinModelPortal:E9PDR3 SMR:E9PDR3 PRIDE:E9PDR3
Ensembl:ENST00000277549 UCSC:uc004coi.3 ArrayExpress:E9PDR3
Bgee:E9PDR3 Uniprot:E9PDR3
Length = 1533
Score = 227 (85.0 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 57/175 (32%), Positives = 95/175 (54%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARG 88
+R + ILV + +L I + + P ++ + IFTG++TFE +K++ G
Sbjct: 341 MRYFEVVILV--VIALSSIALAAEDPVRTDSPRNNALKYLDYIFTGVFTFEMVIKMIDLG 398
Query: 89 FILESFTYLRDAWNWLDFIVIALAYVTM----------GIDLGNLAALRTFRVLRALKTV 138
+L Y RD WN LDFIV++ A V G D+ + +LR RVLR LKT+
Sbjct: 399 LLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFVGGSKGKDINTIKSLRVLRVLRPLKTI 458
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKK---SDESHD 190
+P LK + V+ S+KN+ +++I+ M + +FA++ +Q +GK +DES +
Sbjct: 459 KRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKE 513
Score = 177 (67.4 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 51/171 (29%), Positives = 88/171 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P N +RR YI+ F + I+ I + I + P ++ +
Sbjct: 321 SMFCLSPTNLLRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDY 380
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--LG-----NL 123
IFTG++TFE +K++ G +L Y RD WN LDFIV++ A V +G ++
Sbjct: 381 IFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFVGGSKGKDI 440
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKN-LRDVI-ILTMFSLSVF 172
+++ RVLR L+ + + L + AV + V N L++V+ IL ++ L +F
Sbjct: 441 NTIKSLRVLRVLRPLKTIKRLPKLK-AVFDCVVNSLKNVLNILIVYMLFMF 490
Score = 147 (56.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 41/155 (26%), Positives = 79/155 (50%)
Query: 37 LVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTFESAVKVMARGF 89
+V P F FI+ I N ++++M P ++ ++FT +++ E +K++A G
Sbjct: 664 VVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGV 723
Query: 90 ILESFTYLRDAWNWLDFIVIALAYVT--MGIDLGN----LAALRTFRVLRALKTVAIVPG 143
+ Y RDAWN DF+ + L +T + ++ N L+ LR FR R +K +
Sbjct: 724 L----NYFRDAWNVFDFVTV-LGSITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYT 778
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 779 IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ 813
Score = 54 (24.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 1 TFVVVSKGKDIFRFSATDALWVLDPFNPIRRV 32
+FV SKGKDI + L VL P I+R+
Sbjct: 430 SFVGGSKGKDINTIKSLRVLRVLRPLKTIKRL 461
>UNIPROTKB|J9P083 [details] [associations]
symbol:SCN7A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00650000092939 EMBL:AAEX03017734
Ensembl:ENSCAFT00000046077 Uniprot:J9P083
Length = 1549
Score = 226 (84.6 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 48/115 (41%), Positives = 70/115 (60%)
Query: 63 PTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN 122
P +++T GIYTFE +K++ARG +E F + D WNWLDF V ++T + L
Sbjct: 11 PVLQNT---LLGIYTFEILIKLIARGIWVEPFYFFGDPWNWLDFSVTLFEHITRYLPLYF 67
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ R R LR LK + + GL++ VG +I +K L VI LT+F LSVF+L+G+
Sbjct: 68 IPIFRISRNLRILKIIPLNQGLRSFVGILIHCLKKLTGVITLTLFFLSVFSLIGM 122
Score = 148 (57.2 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 12 FRFSATDALWVLDP-FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTE- 69
+R + T +W P + ++ I++ P L + I+ N + + P E T+
Sbjct: 342 YRCTKTFLIWNCSPCWLKLKEFIHMIIMDPFTDLVLAICIILNICFLALDSYPMSEETKN 401
Query: 70 ------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTMGIDLG 121
+I GI+T E +K++A + + Y + WN D +++ LA + ++
Sbjct: 402 VLSIGNLICVGIFTAEMILKIIA----MHPYGYFQVGWNIFDSLIVFHGLAEFYLA-NIH 456
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
LA RTFRVLR K V P K ++ + +S+ L+D+++L + A++GL+
Sbjct: 457 GLAPFRTFRVLRIFKLVKYWPTFKILMQILNDSLVALKDLVLLLLTFTFFSAVVGLK 513
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 42/159 (26%), Positives = 78/159 (49%)
Query: 29 IRRVAIYILVHPLFSLFI-ITTILTNCIL----MIMPGTPTI----ESTEVIFTGIYTFE 79
IR+ I+ + F FI + T+L+ L + + TI E ++IFT I+ E
Sbjct: 790 IRKTCCKIVENSCFKCFIGLVTLLSTGALAFEDIYIDQRKTIKILLEYADMIFTYIFILE 849
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFRVLRALKTV 138
+K MA GF Y + W LDF+V+ + +++ G L L + + LRAL+ +
Sbjct: 850 MLLKWMAYGFK----AYFTNGWYKLDFMVVIVFCLSLIGKSREELKPLISIKFLRALRVL 905
Query: 139 AIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ +K +V A+I++ +V ++ F+++G+
Sbjct: 906 SQFERMKVVVRALIKTTLPTLNVFLVCFMIWLAFSILGV 944
>WB|WBGene00006742 [details] [associations]
symbol:unc-2 species:6239 "Caenorhabditis elegans"
[GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA;ISS] [GO:0070588 "calcium ion transmembrane transport"
evidence=IEA;ISS] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0015667 "site-specific
DNA-methyltransferase (cytosine-N4-specific) activity"
evidence=IEA] [GO:0090124 "N-4 methylation of cytosine"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007626 "locomotory behavior" evidence=IMP] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=IGI] [GO:0001505 "regulation of
neurotransmitter levels" evidence=IMP] [GO:0009408 "response to
heat" evidence=IMP] [GO:0042594 "response to starvation"
evidence=IMP] [GO:0048787 "presynaptic active zone membrane"
evidence=IDA] [GO:0035545 "determination of left/right asymmetry in
nervous system" evidence=IGI;IMP] InterPro:IPR002048
InterPro:IPR002077 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PROSITE:PS50222 GO:GO:0007626 GO:GO:0042594 GO:GO:0009408
GO:GO:0001505 GO:GO:0030512 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00680000099892 InterPro:IPR014873 SMART:SM01062
KO:K05315 GO:GO:0048787 GO:GO:0035545 EMBL:FO081696 EMBL:FO081224
EMBL:FO081225 RefSeq:NP_001123176.1 UniGene:Cel.235
ProteinModelPortal:G4SFC3 SMR:G4SFC3 EnsemblMetazoa:T02C5.5e
GeneID:180570 KEGG:cel:CELE_T02C5.5 CTD:180570 WormBase:T02C5.5e
OMA:RYYSCER NextBio:909924 Uniprot:G4SFC3
Length = 2087
Score = 227 (85.0 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 61/182 (33%), Positives = 98/182 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM----PGTPT------IEST 68
+L++ N IRR A I+ F FI+ TI+ NC+++ M P +E T
Sbjct: 147 SLFIFAEDNIIRRNAKAIIEWGPFEYFILLTIIGNCVVLSMEQHLPKNDKKALSEWLERT 206
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM------------ 116
E F GI+ E +KV+A GF L +YLR WN +DFIV+ VTM
Sbjct: 207 EPYFMGIFCLECVLKVIAFGFALHKGSYLRSGWNIMDFIVVVSGVVTMLPFSPATQTANQ 266
Query: 117 GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
+D +L LR RVLR LK V+ +P L+ ++ +++ ++ L + +L +F++ +FA++G
Sbjct: 267 PVDSVDLRTLRAVRVLRPLKLVSGIPSLQVVLKSILCAMAPLLQIGLLVLFAIIIFAIIG 326
Query: 177 LQ 178
L+
Sbjct: 327 LE 328
Score = 207 (77.9 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 51/182 (28%), Positives = 91/182 (50%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--------PGTPTIESTEV 70
+++ L P NP R + I+ F + ++T I + + + P ++ +
Sbjct: 893 SMFFLSPTNPFRVLIHSIVCTKYFEMMVMTVICLSSVSLAAEDPVDEENPRNKVLQYMDY 952
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI---------DLG 121
FTG++ E +K++ +G +L +Y RD WN LD IV+ A G +L
Sbjct: 953 CFTGVFACEMLLKLIDQGILLHPGSYCRDFWNILDGIVVTCALFAFGFAGTEGSAGKNLN 1012
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
+ +LR RVLR LKT+ +P LK + V+ S+KN+ +++I+ +FA++ +Q
Sbjct: 1013 TIKSLRVLRVLRPLKTIKRIPKLKAVFDCVVNSLKNVFNILIVYFLFQFIFAVIAVQLFN 1072
Query: 182 GK 183
GK
Sbjct: 1073 GK 1074
Score = 133 (51.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 36 ILVHPLFSLFIITTILTNCILMIMP--GTPTI-ESTEVIF----TGIYTFESAVKVMARG 88
++ P F FI+T I N ++++M P E +F T ++T ES +K++A G
Sbjct: 1236 LVTSPPFEYFIMTMICCNTLILMMKYYNNPLFYEEILRLFNTALTAVFTVESILKILAFG 1295
Query: 89 FILESFTYLRDAWNWLDFIV----IALAYVT-MGIDLGNLAALRTFRVLRALKTVAIVPG 143
Y RD WN DF+ I A VT G +L LR FR R ++ +
Sbjct: 1296 VR----NYFRDGWNRFDFVTVVGSITDALVTEFGGHFVSLGFLRLFRAARLIRLLQQGYT 1351
Query: 144 LKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ++ ++S K L V +L ++A++G+Q
Sbjct: 1352 IRILLWTFVQSFKALPYVCLLIGMLFFIYAIVGMQ 1386
Score = 131 (51.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 31 RVAIYILVHP-LFSLFIITTILTN--CILMIMPGTPT-----IESTEVIFTGIYTFESAV 82
R+ I I+V +F +IT + N C+ G P ++ E +F GI+ E +
Sbjct: 573 RIQIRIMVKTQIFYWSVITLVFLNTCCVASEHYGQPQWFTDFLKYAEFVFLGIFVVEMLL 632
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTMGIDLGN---LAALRTFRVLRALKT 137
K+ A G S TY +N D +VI + A V G ++ +R R+LR K
Sbjct: 633 KLFAMG----SRTYFASKFNRFDCVVIVGSAAEVIWAEVYGGSFGISVMRALRLLRIFKL 688
Query: 138 VAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ L+ +V +++ S++++ ++ L + +FAL+G+Q
Sbjct: 689 TSYWVSLRNLVRSLMNSMRSIISLLFLLFLFILIFALLGMQ 729
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 6 SKGKDIFRFSATDALWVLDPFNPIRRV----AIY-ILVHPLFSLFIITTI 50
S GK++ + L VL P I+R+ A++ +V+ L ++F I +
Sbjct: 1006 SAGKNLNTIKSLRVLRVLRPLKTIKRIPKLKAVFDCVVNSLKNVFNILIV 1055
Score = 35 (17.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITT 49
W L PFN + + + +LF++TT
Sbjct: 1110 WRLRPFNYDNTI------NAMLTLFVVTT 1132
>ZFIN|ZDB-GENE-091204-7 [details] [associations]
symbol:si:ch73-289n4.1 "si:ch73-289n4.1" species:7955
"Danio rerio" [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0070588 "calcium ion transmembrane
transport" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0034765 "regulation of ion transmembrane transport"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
ZFIN:ZDB-GENE-091204-7 GO:GO:0005891 GO:GO:0005245
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
GeneTree:ENSGT00680000099727 EMBL:CABZ01031006 EMBL:CABZ01031007
EMBL:CABZ01031008 EMBL:CU861668 IPI:IPI00901003
Ensembl:ENSDART00000011078 Uniprot:F1R736
Length = 1914
Score = 163 (62.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 40/155 (25%), Positives = 85/155 (54%)
Query: 32 VAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFIL 91
+ I+I++ FSL I T+ + +M G + +FT ++T E +K+ G L
Sbjct: 823 ILIFIILSS-FSLAAEDPIKTHSVRNVMLGY-----ADYVFTTVFTIEIMLKMTVYGAFL 876
Query: 92 ESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---LRTFRVLRALKTVAIVPGLKTIV 148
++ R+A+N LD +V++++ + ++ ++ LR RVLR L+ + GLK+++
Sbjct: 877 HQGSFCRNAFNLLDLLVVSVSLTSFFLNSSAISVVKILRVLRVLRPLRAINRAKGLKSVI 936
Query: 149 GAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
V +++ + +++I+T +FA +G+Q +G+
Sbjct: 937 QCVFVAIRTIGNILIVTTLLQFMFACIGVQLFKGR 971
Score = 148 (57.2 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 16 ATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM-IMPGTP---------TI 65
A AL L NPIR A+ ++ F +FI+ I NC+ + + P +
Sbjct: 19 APRALCCLTLSNPIRMAALALVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNATNHNL 78
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLG 121
E E +F I+T E+ K++A G ++ Y+R WN LDFI++ + ++ ++G
Sbjct: 79 EQVEYVFLVIFTIETFTKILAYGLVMHPSAYIRSGWNLLDFIIVIVGLFSVIAEMG 134
Score = 106 (42.4 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 20/57 (35%), Positives = 41/57 (71%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ ALR FRVLR L+ V+ VP L+ ++ ++++++ L + +L MF + ++A++GL+
Sbjct: 153 DVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIGLLVMFVIIIYAIIGLE 209
>UNIPROTKB|F1P435 [details] [associations]
symbol:F1P435 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] [GO:0005901 "caveola" evidence=IEA] [GO:0008332 "low
voltage-gated calcium channel activity" evidence=IEA] [GO:0032342
"aldosterone biosynthetic process" evidence=IEA] [GO:0032870
"cellular response to hormone stimulus" evidence=IEA] [GO:0034651
"cortisol biosynthetic process" evidence=IEA] [GO:0035865 "cellular
response to potassium ion" evidence=IEA] [GO:0042383 "sarcolemma"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0070509 "calcium ion import" evidence=IEA]
[GO:0097110 "scaffold protein binding" evidence=IEA] [GO:2000344
"positive regulation of acrosome reaction" evidence=IEA]
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01629
GO:GO:0032870 GO:GO:0032342 GO:GO:0035865 GO:GO:0034651
GO:GO:0005891 GO:GO:0005245 OMA:PDPYEKI GO:GO:2000344
GeneTree:ENSGT00650000092939 EMBL:AADN02023694 IPI:IPI00578999
Ensembl:ENSGALT00000008381 Uniprot:F1P435
Length = 1676
Score = 211 (79.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE------- 69
+L++ P N R + ++ H +F ++ I NCI + + P I+ STE
Sbjct: 1068 SLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALE-RPDIDPHSTERIFLSVS 1126
Query: 70 -VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID--------- 119
IFT I+ E VKV+A GF TYL+ +WN LD +++ ++ + + +
Sbjct: 1127 NYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKI 1186
Query: 120 LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
LG L LR R LR L+ ++ PGLK +V +I S++ + +++++ +F ++G+Q
Sbjct: 1187 LGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQL 1246
Query: 180 SRGK 183
+GK
Sbjct: 1247 FKGK 1250
Score = 162 (62.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 35/116 (30%), Positives = 65/116 (56%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN-- 122
+E+ + + E +K++A G I YL D WN LDF ++ + +D N
Sbjct: 36 LEAFDDFIFAFFAVEMVIKMVALG-IFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVS 94
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+A+RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 95 LSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 150
Score = 161 (61.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 33/117 (28%), Positives = 70/117 (59%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++A G F Y+++ +N D I++ ++ + +G
Sbjct: 599 TNALEISNIVFTSMFALEMLLKLLAFGL----FGYIKNPYNIFDGIIVVISVWEIIGQSD 654
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR+LR LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 655 GGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 711
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/173 (24%), Positives = 82/173 (47%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--GTP-----TIESTEVIFTGIYTF 78
++P R+ + LFI I N I M M P ++ +FT ++ F
Sbjct: 1392 YSPARKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVF 1451
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL--------- 126
E+ +K++A GF + +D WN LD ++ L+ V GI L + AAL
Sbjct: 1452 EAVLKLVAFGFR----RFFKDRWNQLDLAIVLLSIV--GITLEEIEMNAALPINPTIIRI 1505
Query: 127 -RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R R+ R LK + + G++ ++ V++++ + ++ +L M ++A +G++
Sbjct: 1506 MRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE 1558
>ZFIN|ZDB-GENE-060503-324 [details] [associations]
symbol:cacna1i "calcium channel, voltage-dependent,
T type, alpha 1I subunit" species:7955 "Danio rerio" [GO:0005216
"ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0070588 "calcium ion
transmembrane transport" evidence=IEA] [GO:0005891 "voltage-gated
calcium channel complex" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01629
ZFIN:ZDB-GENE-060503-324 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00650000092939 EMBL:BX005369 EMBL:BX324143
EMBL:BX649491 IPI:IPI00499515 Ensembl:ENSDART00000145615
Uniprot:F1QCC4
Length = 2188
Score = 207 (77.9 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 53/181 (29%), Positives = 96/181 (53%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILM------IMPGTPT---IESTE 69
++++ P N R + I+ H LF ++ I +NCI + I+ G+ + +
Sbjct: 1109 SVFLFSPQNKFRLLCQSIIAHKLFDYVVLAFIFSNCITVALERPKILQGSLERLFLTVSN 1168
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-FIV-IALAYVTMGID-----LGN 122
IFT I+ E +KV++ G + YLR +WN LD F+V ++L + + + LG
Sbjct: 1169 YIFTAIFVGEMTLKVVSMGLYIGEQAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGV 1228
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRG 182
L LR R LR L+ ++ PGLK +V +I S+K + +++++ +F ++G+Q +G
Sbjct: 1229 LRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKG 1288
Query: 183 K 183
K
Sbjct: 1289 K 1289
Score = 183 (69.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 52/150 (34%), Positives = 79/150 (52%)
Query: 42 FSLFIITTILTNCIL--MIMPGTP---TIESTEVI--FTG-IYTF---ESAVKVMARGFI 90
F I IL NC+ M P T E +V+ F IY F E VK++A G I
Sbjct: 79 FERISIMVILLNCVTLGMYQPCENIDCTSERCQVLQAFDAFIYIFFALEMVVKMVALG-I 137
Query: 91 LESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL--AALRTFRVLRALKTVAIVPGLKTIV 148
YL D WN LDF ++ V +DL N+ +A+RT RVLR LK + VP ++ +V
Sbjct: 138 FGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINFSAIRTVRVLRPLKAINRVPSMRILV 197
Query: 149 GAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+++++ L +V++L F +F ++G+Q
Sbjct: 198 NLLLDTLPMLGNVLLLCFFVFFIFGIIGVQ 227
Score = 171 (65.3 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 47/156 (30%), Positives = 86/156 (55%)
Query: 31 RVAIYILVHP-LFSLFIITTILTNCILMIM-----PG--TPTIESTEVIFTGIYTFESAV 82
RV ++ +V F+ I+ IL N I M + P T +E ++FT ++T E +
Sbjct: 604 RVKLWGIVESKYFNRGIMIAILINTISMGIEHHNQPDELTNVLEICNIVFTSMFTLEMIL 663
Query: 83 KVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDLGNLAALRTFRVLRALKTVAIV 141
K+ A GF F YLR+ +N D I++ ++ + G G L+ LRTFR+LR +K V +
Sbjct: 664 KLTAFGF----FEYLRNPYNIFDGIIVIISVCEIIGQSDGGLSVLRTFRLLRVIKLVRFM 719
Query: 142 PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 720 PALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 755
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 40/170 (23%), Positives = 79/170 (46%)
Query: 34 IYILVHPL-----FSLFIITTILTNCILMIMPGTPTIESTEV-------IFTGIYTFESA 81
+ +++H L +FI I N + M + S E+ FT + E+
Sbjct: 1434 VRLMIHTLCTSHYLDIFITFIICVNVVTMSLEHYSQPHSLEIALKYCNYFFTSTFVLEAV 1493
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL----------RT 128
+K++A GF + +D WN LD ++ L+ MGI L + AAL R
Sbjct: 1494 LKLIAFGFR----RFFKDRWNQLDLAIVLLS--VMGITLEEIEISAALPINPTIIRIMRV 1547
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
R+ R LK + + G++ ++ V++++ + ++ +L M ++A +G++
Sbjct: 1548 LRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE 1597
>UNIPROTKB|F1NJQ0 [details] [associations]
symbol:F1NJQ0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002095 "caveolar macromolecular signaling
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0008217 "regulation of blood pressure" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0017156 "calcium
ion-dependent exocytosis" evidence=IEA] [GO:0019229 "regulation of
vasoconstriction" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0030073 "insulin secretion" evidence=IEA] [GO:0030252 "growth
hormone secretion" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043198 "dendritic shaft" evidence=IEA] [GO:0046620 "regulation
of organ growth" evidence=IEA] [GO:0051393 "alpha-actinin binding"
evidence=IEA] [GO:0060083 "smooth muscle contraction involved in
micturition" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005451 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 GO:GO:0005737 GO:GO:0014069 GO:GO:0007204
GO:GO:0005891 GO:GO:0005245 PANTHER:PTHR10037:SF47
GeneTree:ENSGT00680000099727 OMA:PGRQFHG EMBL:AADN02006507
EMBL:AADN02006508 EMBL:AADN02006509 EMBL:AADN02006510
EMBL:AADN02006511 EMBL:AADN02006512 EMBL:AADN02006513
IPI:IPI00597233 Ensembl:ENSGALT00000021249 ArrayExpress:F1NJQ0
Uniprot:F1NJQ0
Length = 1447
Score = 197 (74.4 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 42/119 (35%), Positives = 75/119 (63%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM---GIDLG-NLA 124
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + + G G ++
Sbjct: 1 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLMRILSGGKGAGFDVK 60
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F + ++A++GL+ GK
Sbjct: 61 ALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGK 119
Score = 174 (66.3 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 820 DIVFTVIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 879
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 880 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 937
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/170 (24%), Positives = 81/170 (47%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--GTPTI--ESTEVI---FTGIYT 77
P N + Y++ F + IL N I + M G + E+ ++ FTG++T
Sbjct: 1089 PKNQYQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCMFKEAMNILNMLFTGLFT 1148
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---------LRT 128
E +K++A + Y D WN DF+++ + + + + N A R
Sbjct: 1149 VEMVLKLIA----FKPKGYFSDPWNVFDFLIVIGSIIDVILSETNNAEENSRISITFFRL 1204
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1205 FRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1254
>UNIPROTKB|F1Q382 [details] [associations]
symbol:CACNA1C "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005451 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 PRINTS:PR01635 GO:GO:0005891 GO:GO:0005245
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF47 GeneTree:ENSGT00680000099727 OMA:PGRQFHG
EMBL:AAEX03015335 EMBL:AAEX03015334 Ensembl:ENSCAFT00000017437
Uniprot:F1Q382
Length = 2179
Score = 178 (67.7 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 43/134 (32%), Positives = 77/134 (57%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID------ 119
E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 151 ERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKAD 210
Query: 120 ----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F +
Sbjct: 211 GANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI 270
Query: 170 SVFALMGLQDSRGK 183
++A++GL+ GK
Sbjct: 271 IIYAIIGLELFMGK 284
Score = 178 (67.7 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 46/149 (30%), Positives = 83/149 (55%)
Query: 39 HPLFSLFII-TTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYL 97
H LF I+ TTI T I + + G + + +FT I+T E +K+ A G L ++
Sbjct: 922 HILFYFDIVFTTIFTIEIALKILG-----NADYVFTSIFTLEIILKMTAYGAFLHKGSFC 976
Query: 98 RDAWNWLDFIVIALAYVTMGID---LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
R+ +N LD +V++++ ++ GI + + LR RVLR L+ + GLK +V V +
Sbjct: 977 RNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVA 1036
Query: 155 VKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ + +++I+T +FA +G+Q +GK
Sbjct: 1037 IRTIGNIVIVTTLLQFMFACIGVQLFKGK 1065
Score = 146 (56.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 38/104 (36%), Positives = 55/104 (52%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PG--TPTI-------ES 67
AL L NPIRR I I+ F + I+ TI NC+ + + PG + I E
Sbjct: 93 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALALYIPGPQSQAIAAPHSDRER 152
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 153 VEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 196
Score = 77 (32.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ R FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1363 SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1419
>ZFIN|ZDB-GENE-090514-2 [details] [associations]
symbol:cacna1g "calcium channel, voltage-dependent, T
type, alpha 1G subunit" species:7955 "Danio rerio" [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0034765 "regulation
of ion transmembrane transport" evidence=IEA] [GO:0005262 "calcium
channel activity" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005244 "voltage-gated ion
channel activity" evidence=IEA] InterPro:IPR002077
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01629 ZFIN:ZDB-GENE-090514-2 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00650000092939 EMBL:AL929109 EMBL:BX005134
EMBL:CABZ01027640 EMBL:CABZ01027641 EMBL:CABZ01027642 EMBL:CT573007
IPI:IPI00803327 Ensembl:ENSDART00000123534 Uniprot:E7F9F6
Length = 2389
Score = 179 (68.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 38/122 (31%), Positives = 69/122 (56%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---------G 121
IFT I+ E +KV+A GF TYL+ +WN LD +++ ++ + + + L G
Sbjct: 1351 IFTAIFVTEMTIKVVALGFCFGEKTYLKSSWNILDGMLVMISVIDILVSLISNSGTKILG 1410
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ PGLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1411 MLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1470
Query: 182 GK 183
GK
Sbjct: 1471 GK 1472
Score = 162 (62.1 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 43/162 (26%), Positives = 82/162 (50%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT---------IESTEVIFTGIYTF 78
R + ++ +P F + IL NC+ + M P + +E + +
Sbjct: 90 RSWCLKMVCNPWFERASMLVILLNCVTLGMFHPCEDSHCDSERCKILEDFDDFIFAFFAV 149
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--ALRTFRVLRALK 136
E +K++A G I YL D WN LDF ++ + ++L N++ A+RT RVLR L+
Sbjct: 150 EMVIKMVALG-IFGKKCYLGDTWNRLDFFIVLAGMLEYSLNLQNVSFSAVRTVRVLRPLR 208
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 209 AINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 250
Score = 155 (59.6 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 31/117 (26%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D I++ ++ + +G
Sbjct: 795 TNALEISNIVFTSLFVLEMLLKLLVYG----PFGYIKNPYNIFDGIIVVISVWEIVGQQG 850
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 851 GGLSVLRTFRLMRVLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 907
Score = 152 (58.6 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 13 RFSATDALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE- 69
R T +L++ P + R I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1284 RQRVTWSLYLFPPESRFRVTCNKIITHKMFDHVVLVIIFLNCITIAME-RPRIDPSSAER 1342
Query: 70 -------VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL-G 121
IFT I+ E +KV+A GF TYL+ +WN LD +++ ++ + + + L
Sbjct: 1343 IFLTLSNYIFTAIFVTEMTIKVVALGFCFGEKTYLKSSWNILDGMLVMISVIDILVSLIS 1402
Query: 122 N-----LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMG 176
N L LR R+LR L+ + ++ + V + +L+ + + + + F + G
Sbjct: 1403 NSGTKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLKPIGNIVVICCAFFIIFG 1462
Query: 177 L 177
+
Sbjct: 1463 I 1463
Score = 134 (52.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 50/182 (27%), Positives = 85/182 (46%)
Query: 28 PIRRVAIYILVHPLFSLFIITTILTNCILMIMPG--TPTI--ESTEV---IFTGIYTFES 80
P RR+ + LFI I N I M M P + +S ++ IFT I+ ES
Sbjct: 1632 PTRRLIYNMCKSQYLDLFITIVIALNVITMSMEHYHQPKVLSDSLKICNYIFTVIFVLES 1691
Query: 81 AVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL----------R 127
K++A GF + +D WN LD ++ L+ MGI L + A+L R
Sbjct: 1692 IFKLVAFGFR----RFFKDRWNQLDLAIVLLSI--MGITLEEIEVNASLPINPTIIRIMR 1745
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDE 187
R+ R LK + + G++ ++ V++++ + ++ +L M +FA +G++ DE
Sbjct: 1746 VLRITRVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLICDE 1805
Query: 188 SH 189
H
Sbjct: 1806 LH 1807
Score = 43 (20.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 195 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 240
>UNIPROTKB|F5H522 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 GO:GO:0005891 GO:GO:0005245 EMBL:AC005342
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF47 EMBL:AC005293 EMBL:AC005344 EMBL:AC005414
EMBL:AC005866 EMBL:AC006051 EMBL:AC007618 HGNC:HGNC:1390
ChiTaRS:CACNA1C IPI:IPI00384621 ProteinModelPortal:F5H522
SMR:F5H522 Ensembl:ENST00000335762 ArrayExpress:F5H522 Bgee:F5H522
Uniprot:F5H522
Length = 2163
Score = 180 (68.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 962 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 1021
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 1022 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1079
Score = 144 (55.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
Score = 77 (32.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ R FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1349 SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1405
>RGD|2245 [details] [associations]
symbol:Cacna1c "calcium channel, voltage-dependent, L type, alpha
1C subunit" species:10116 "Rattus norvegicus" [GO:0002095 "caveolar
macromolecular signaling complex" evidence=ISO] [GO:0005245
"voltage-gated calcium channel activity" evidence=ISO;IDA;IMP;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=IC;ISO;IDA;TAS] [GO:0006816 "calcium ion transport"
evidence=ISO;IMP] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006939 "smooth muscle contraction" evidence=ISO]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007628 "adult walking behavior" evidence=ISO] [GO:0008217
"regulation of blood pressure" evidence=ISO] [GO:0008331 "high
voltage-gated calcium channel activity" evidence=IDA;IMP] [GO:0008542
"visual learning" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016021 "integral to membrane" evidence=ISO] [GO:0017156 "calcium
ion-dependent exocytosis" evidence=ISO] [GO:0019229 "regulation of
vasoconstriction" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030018 "Z disc" evidence=ISO;IDA]
[GO:0030073 "insulin secretion" evidence=ISO] [GO:0030252 "growth
hormone secretion" evidence=ISO] [GO:0030315 "T-tubule"
evidence=IDA;TAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0042383
"sarcolemma" evidence=IDA] [GO:0042593 "glucose homeostasis"
evidence=ISO] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043198
"dendritic shaft" evidence=ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044325 "ion channel binding" evidence=IPI]
[GO:0046620 "regulation of organ growth" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051393 "alpha-actinin binding"
evidence=ISO] [GO:0051721 "protein phosphatase 2A binding"
evidence=IPI] [GO:0060083 "smooth muscle contraction involved in
micturition" evidence=ISO] [GO:0070509 "calcium ion import"
evidence=IMP] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] Reactome:REACT_113568 InterPro:IPR002077
InterPro:IPR005446 InterPro:IPR005451 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR00167 PRINTS:PR01630 PRINTS:PR01635 RGD:2245 GO:GO:0014069
GO:GO:0030018 GO:GO:0046872 GO:GO:0043025 GO:GO:0030315 GO:GO:0007204
GO:GO:0005891 GO:GO:0005245 eggNOG:COG1226 InterPro:IPR014873
SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763 PANTHER:PTHR10037:SF47
CTD:775 KO:K04850 EMBL:M59786 EMBL:M67515 EMBL:M67516 EMBL:M91242
EMBL:M91240 EMBL:M89924 EMBL:M91241 EMBL:S80558 EMBL:U31815
IPI:IPI00231323 IPI:IPI00392650 IPI:IPI00476992 IPI:IPI00948183
IPI:IPI00949968 RefSeq:NP_036649.2 UniGene:Rn.9827 PDB:1VYT
PDBsum:1VYT ProteinModelPortal:P22002 SMR:P22002 IntAct:P22002
STRING:P22002 PhosphoSite:P22002 PRIDE:P22002 GeneID:24239
KEGG:rno:24239 UCSC:RGD:2245 InParanoid:P22002 BindingDB:P22002
ChEMBL:CHEMBL3762 EvolutionaryTrace:P22002 NextBio:602705
ArrayExpress:P22002 Genevestigator:P22002
GermOnline:ENSRNOG00000007090 Uniprot:P22002
Length = 2169
Score = 180 (68.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 189 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 248
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 249 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 308
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 309 IIIYAIIGLELFMGK 323
Score = 174 (66.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 36/117 (30%), Positives = 71/117 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRT 128
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + ++
Sbjct: 967 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 1026
Query: 129 FRVLRALKTVAI--VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR L+ + I GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 1027 LRVLRVLRPLRINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1083
Score = 144 (55.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 133 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 192
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 193 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 235
Score = 77 (32.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ R FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1353 SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1409
>UNIPROTKB|E9PDI6 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 GO:GO:0005891 GO:GO:0005245 EMBL:AC005342
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF47 EMBL:AC005293 EMBL:AC005344 EMBL:AC005414
EMBL:AC005866 EMBL:AC006051 EMBL:AC007618 IPI:IPI00828174
HGNC:HGNC:1390 ChiTaRS:CACNA1C ProteinModelPortal:E9PDI6 SMR:E9PDI6
Ensembl:ENST00000399634 OMA:PGRQFHG ArrayExpress:E9PDI6 Bgee:E9PDI6
Uniprot:E9PDI6
Length = 2209
Score = 180 (68.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 937 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 996
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 997 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1054
Score = 144 (55.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
Score = 77 (32.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ R FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1324 SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1380
>UNIPROTKB|Q13936 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9606 "Homo sapiens" [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0002095 "caveolar macromolecular
signaling complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0008217 "regulation of blood pressure"
evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0017156 "calcium ion-dependent exocytosis" evidence=IEA]
[GO:0019229 "regulation of vasoconstriction" evidence=IEA]
[GO:0030073 "insulin secretion" evidence=IEA] [GO:0030252 "growth
hormone secretion" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043198 "dendritic shaft" evidence=IEA] [GO:0046620 "regulation
of organ growth" evidence=IEA] [GO:0060083 "smooth muscle
contraction involved in micturition" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0005516 "calmodulin binding" evidence=IPI]
[GO:0005245 "voltage-gated calcium channel activity" evidence=IDA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IDA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA;TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0044281
"small molecule metabolic process" evidence=TAS] [GO:0050796
"regulation of insulin secretion" evidence=TAS] [GO:0060402
"calcium ion transport into cytosol" evidence=TAS] [GO:0030018 "Z
disc" evidence=ISS] [GO:0008331 "high voltage-gated calcium channel
activity" evidence=TAS] [GO:0035585 "calcium-mediated signaling
using extracellular calcium source" evidence=TAS] [GO:0010881
"regulation of cardiac muscle contraction by regulation of the
release of sequestered calcium ion" evidence=TAS] [GO:0086064 "cell
communication by electrical coupling involved in cardiac
conduction" evidence=TAS] [GO:0051393 "alpha-actinin binding"
evidence=IPI] Reactome:REACT_111217 InterPro:IPR002077
InterPro:IPR005446 InterPro:IPR005451 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630 PRINTS:PR01635
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0014069 GO:GO:0030018
GO:GO:0044281 GO:GO:0046872 GO:GO:0043025 GO:GO:0006112
GO:GO:0050796 GO:GO:0030315 DrugBank:DB00622 GO:GO:0060402
DrugBank:DB00308 DrugBank:DB00270 DrugBank:DB00653 GO:GO:0005891
GO:GO:0005245 EMBL:AC005342 eggNOG:COG1226 InterPro:IPR014873
SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763
PANTHER:PTHR10037:SF47 EMBL:M92269 EMBL:M92270 EMBL:M92271
EMBL:M92272 EMBL:M92273 EMBL:M92274 EMBL:M92275 EMBL:L04568
EMBL:L04569 EMBL:L29529 EMBL:Z26256 EMBL:Z26257 EMBL:Z26258
EMBL:Z26259 EMBL:Z26260 EMBL:Z26261 EMBL:Z26262 EMBL:Z26263
EMBL:Z26264 EMBL:Z26265 EMBL:Z26266 EMBL:Z26267 EMBL:Z26268
EMBL:Z26269 EMBL:Z26271 EMBL:Z26272 EMBL:Z26273 EMBL:Z26274
EMBL:Z26275 EMBL:Z26276 EMBL:Z26277 EMBL:Z26278 EMBL:Z26279
EMBL:Z26280 EMBL:Z26281 EMBL:Z26282 EMBL:Z26283 EMBL:Z26284
EMBL:Z26286 EMBL:Z26287 EMBL:Z26288 EMBL:Z26294 EMBL:Z26295
EMBL:Z26308 EMBL:Z34809 EMBL:Z34810 EMBL:Z34811 EMBL:Z34812
EMBL:Z34813 EMBL:Z34814 EMBL:Z34815 EMBL:Z34816 EMBL:Z34817
EMBL:Z34818 EMBL:Z34819 EMBL:Z34820 EMBL:Z34821 EMBL:Z34822
EMBL:L29530 EMBL:L29531 EMBL:L29532 EMBL:L29533 EMBL:L29534
EMBL:L29535 EMBL:L29536 EMBL:L29537 EMBL:L29538 EMBL:L29539
EMBL:Z74996 EMBL:AJ224873 EMBL:AF465484 EMBL:AY830711 EMBL:AY830712
EMBL:AY830713 EMBL:AC005293 EMBL:AC005344 EMBL:AC005414
EMBL:AC005866 EMBL:AC006051 EMBL:AC007618 EMBL:BC146846
EMBL:AY604867 EMBL:M57971 EMBL:M57972 EMBL:M61130 EMBL:M91370
IPI:IPI00016709 IPI:IPI00216095 IPI:IPI00607583 IPI:IPI00744784
IPI:IPI00793099 IPI:IPI00793792 IPI:IPI00794300 IPI:IPI00794357
IPI:IPI00797606 IPI:IPI00798235 IPI:IPI00827513 IPI:IPI00827543
IPI:IPI00827553 IPI:IPI00827578 IPI:IPI00827633 IPI:IPI00827681
IPI:IPI00827766 IPI:IPI00827775 IPI:IPI00827851 IPI:IPI00827855
IPI:IPI00827887 IPI:IPI00827942 IPI:IPI00827956 IPI:IPI00827998
IPI:IPI00828000 IPI:IPI00828035 IPI:IPI00828116 IPI:IPI00828128
IPI:IPI00828174 IPI:IPI00828206 IPI:IPI00828210 IPI:IPI00853140
IPI:IPI00900275 IPI:IPI00954938 IPI:IPI01009352 PIR:A23660
PIR:A44363 PIR:A45290 PIR:B23660 PIR:C23660 PIR:I54168
RefSeq:NP_000710.5 RefSeq:NP_001123299.1 RefSeq:NP_001123301.1
RefSeq:NP_001123302.1 RefSeq:NP_001123303.1 RefSeq:NP_001123304.1
RefSeq:NP_001123305.1 RefSeq:NP_001123306.1 RefSeq:NP_001123307.1
RefSeq:NP_001123308.1 RefSeq:NP_001123309.1 RefSeq:NP_001123310.1
RefSeq:NP_001123311.1 RefSeq:NP_001123312.1 RefSeq:NP_001123313.1
RefSeq:NP_001123314.1 RefSeq:NP_001123315.1 RefSeq:NP_001123316.1
RefSeq:NP_001123318.1 RefSeq:NP_001161095.1 RefSeq:NP_001161096.1
RefSeq:NP_001161097.1 RefSeq:NP_955630.2 UniGene:Hs.118262 PDB:1T0J
PDB:2BE6 PDB:2F3Y PDB:2F3Z PDB:2LQC PDB:3G43 PDB:3OXQ PDBsum:1T0J
PDBsum:2BE6 PDBsum:2F3Y PDBsum:2F3Z PDBsum:2LQC PDBsum:3G43
PDBsum:3OXQ ProteinModelPortal:Q13936 SMR:Q13936 DIP:DIP-29589N
IntAct:Q13936 STRING:Q13936 TCDB:1.A.1.11.4 PhosphoSite:Q13936
DMDM:308153651 PaxDb:Q13936 PRIDE:Q13936 Ensembl:ENST00000327702
Ensembl:ENST00000344100 Ensembl:ENST00000347598
Ensembl:ENST00000399591 Ensembl:ENST00000399595
Ensembl:ENST00000399597 Ensembl:ENST00000399601
Ensembl:ENST00000399606 Ensembl:ENST00000399621
Ensembl:ENST00000399629 Ensembl:ENST00000399637
Ensembl:ENST00000399638 Ensembl:ENST00000399641
Ensembl:ENST00000399644 Ensembl:ENST00000399649
Ensembl:ENST00000399655 Ensembl:ENST00000402845 GeneID:775
KEGG:hsa:775 UCSC:uc001qjz.2 UCSC:uc001qkb.2 UCSC:uc001qkc.2
UCSC:uc001qkd.2 UCSC:uc001qke.2 UCSC:uc001qkf.2 UCSC:uc001qkg.2
UCSC:uc001qkh.2 UCSC:uc001qki.1 UCSC:uc001qkl.2 UCSC:uc001qkm.2
UCSC:uc001qkn.2 UCSC:uc001qko.2 UCSC:uc001qkp.2 UCSC:uc001qkq.2
UCSC:uc001qkr.2 UCSC:uc001qks.2 UCSC:uc001qkt.2 UCSC:uc001qku.2
UCSC:uc009zdu.1 UCSC:uc009zdv.1 UCSC:uc009zdw.1 CTD:775
GeneCards:GC12P002032 H-InvDB:HIX0010327 HGNC:HGNC:1390
HPA:HPA039796 MIM:114205 MIM:601005 MIM:611875 neXtProt:NX_Q13936
Orphanet:130 Orphanet:65283 PharmGKB:PA83 KO:K04850
BindingDB:Q13936 ChEMBL:CHEMBL1940 ChiTaRS:CACNA1C DrugBank:DB01388
DrugBank:DB00661 EvolutionaryTrace:Q13936 GenomeRNAi:775
NextBio:3132 ArrayExpress:Q13936 Bgee:Q13936 Genevestigator:Q13936
Uniprot:Q13936
Length = 2221
Score = 180 (68.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 178 (67.7 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 46/149 (30%), Positives = 83/149 (55%)
Query: 39 HPLFSLFII-TTILTNCILMIMPGTPTIESTEVIFTGIYTFESAVKVMARGFILESFTYL 97
H LF I+ TTI T I + + G + + +FT I+T E +K+ A G L ++
Sbjct: 931 HILFYFDIVFTTIFTIEIALKILG-----NADYVFTSIFTLEIILKMTAYGAFLHKGSFC 985
Query: 98 RDAWNWLDFIVIALAYVTMGID---LGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIES 154
R+ +N LD +V++++ ++ GI + + LR RVLR L+ + GLK +V V +
Sbjct: 986 RNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVA 1045
Query: 155 VKNLRDVIILTMFSLSVFALMGLQDSRGK 183
++ + +++I+T +FA +G+Q +GK
Sbjct: 1046 IRTIGNIVIVTTLLQFMFACIGVQLFKGK 1074
Score = 144 (55.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
Score = 77 (32.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ R FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1372 SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1428
>WB|WBGene00000367 [details] [associations]
symbol:cca-1 species:6239 "Caenorhabditis elegans"
[GO:0005245 "voltage-gated calcium channel activity" evidence=IEA]
[GO:0005891 "voltage-gated calcium channel complex" evidence=IEA]
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0043051
"regulation of pharyngeal pumping" evidence=IGI;IMP] [GO:0045760
"positive regulation of action potential" evidence=IMP] [GO:0051899
"membrane depolarization" evidence=IMP] [GO:0008332 "low
voltage-gated calcium channel activity" evidence=ISS]
InterPro:IPR002077 InterPro:IPR005445 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01629 GO:GO:0040007
GO:GO:0002119 GO:GO:0000003 GO:GO:0043051 GO:GO:0051899
GO:GO:0045760 GO:GO:0005891 GO:GO:0008332 KO:K05315
HOGENOM:HOG000007742 GeneTree:ENSGT00650000092939 EMBL:FO080947
UniGene:Cel.19373 GeneID:181045 KEGG:cel:CELE_C54D2.5 CTD:181045
NextBio:912142 UCSC:C54D2.5e EMBL:AY313899 RefSeq:NP_001024497.1
ProteinModelPortal:Q7Z003 SMR:Q7Z003 PRIDE:Q7Z003
EnsemblMetazoa:C54D2.5d WormBase:C54D2.5d InParanoid:Q7Z003
OMA:FEESMAG ArrayExpress:Q7Z003 Uniprot:Q7Z003
Length = 1885
Score = 190 (71.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 49/183 (26%), Positives = 94/183 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT-------IESTE 69
+L+++ P NP+R + F ++ I NCI + M P P + +
Sbjct: 1138 SLFLMGPKNPLRIKCLQTTQKKWFDYTVLFFIGINCITLAMERPSIPPDSFERQFLHISG 1197
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL---GN---- 122
IFT I+T E +KV+A G + Y +D WN LD I++ ++ + + +L G+
Sbjct: 1198 YIFTVIFTGEMMMKVIANGCFIGQAAYFKDGWNILDGILVVISLINIAFELLATGDSPKI 1257
Query: 123 LAALRTFRVLRALKTVAIV---PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
+R R+LRAL+ + ++ PG+K +V +I S+K + +++++ +F ++G+Q
Sbjct: 1258 FGVIRVLRLLRALRPLRVINRAPGVKLVVMTLISSLKPIGNIVLICCTFFIIFGILGVQL 1317
Query: 180 SRG 182
+G
Sbjct: 1318 FKG 1320
Score = 189 (71.6 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 50/168 (29%), Positives = 89/168 (52%)
Query: 28 PIRRVAIYILVHPLFSLFIITTILTNCILMIM-------PGTPTI--ESTEVIFTGIYT- 77
P R+ A+ +++ P F + I+ NC+ + M P T + ++I I+
Sbjct: 118 PPRKWALQMVMSPWFDRITMAVIMINCVTLGMYRPCEDGPDCDTYRCQILDIIDNCIFVY 177
Query: 78 --FESAVKVMARGFILESFTYLRDAWNWLDFIVI--ALAYVTMGIDLG---NLAALRTFR 130
FE +K+MA GF + Y+ D WN LDF ++ +A + LG NL A+RT R
Sbjct: 178 FAFEMVIKIMALGFYGPA-AYMSDTWNRLDFFIVMAGIAEFVLHEYLGGNINLTAIRTVR 236
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
VLR L+ V +P ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 237 VLRPLRAVNRIPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 284
Score = 146 (56.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/117 (29%), Positives = 66/117 (56%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID-L 120
T +E + + FT ++ E +K++A G F YL D +N D ++AL+ + + +
Sbjct: 682 TVILEYSNLFFTALFALEMLLKIIASGL----FGYLADGFNLFDGGIVALSVLELFQEGK 737
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR+LR LK V +P L+ + ++ ++ N+ L + + +F+++G+
Sbjct: 738 GGLSVLRTFRLLRILKLVRFMPALRYQLVVMLRTMDNVTVFFGLLVLFIFIFSILGM 794
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 52/174 (29%), Positives = 86/174 (49%)
Query: 36 ILVHPLFSLFIITTILTNCILM-----IMP-GTP-TIESTEVIFTGIYTFESAVKVMARG 88
I+ F L I I N I M +MP G +++ FT ++T E+A+K++A G
Sbjct: 1485 IVTSKYFDLAIAAVIGINVISMAMEFYMMPMGLKYVLKALNYFFTAVFTLEAAMKLIALG 1544
Query: 89 FILESFTYLRDAWNWLD-FIVI-ALAYVTM----GIDLG-NLAALRTFRVLR---ALKTV 138
F + F ++ + WN LD FIVI ++A + ++L N +R RVLR LK +
Sbjct: 1545 F--KRF-FI-EKWNRLDMFIVILSIAGIIFEEFEALELPINPTIIRVMRVLRIARVLKLL 1600
Query: 139 AIVPGLKTI---VGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKSDESH 189
+ G++++ VG + V NL + L F +FA +G++ + E H
Sbjct: 1601 KMAKGIRSLLDTVGEALPQVGNLGSLFFLLFF---IFAALGVELFGKLECSEDH 1651
>ZFIN|ZDB-GENE-020129-1 [details] [associations]
symbol:cacna1c "calcium channel, voltage-dependent, L
type, alpha 1C subunit" species:7955 "Danio rerio" [GO:0070588
"calcium ion transmembrane transport" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005245 "voltage-gated
calcium channel activity" evidence=IEA;IMP] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA;IC]
[GO:0006811 "ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008016 "regulation of heart contraction"
evidence=IMP] [GO:0003007 "heart morphogenesis" evidence=IMP]
[GO:0006816 "calcium ion transport" evidence=IEA;IMP] [GO:0034765
"regulation of ion transmembrane transport" evidence=IEA;IMP]
[GO:0005244 "voltage-gated ion channel activity" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005451 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 PRINTS:PR01635 ZFIN:ZDB-GENE-020129-1 GO:GO:0003007
GO:GO:0008016 GO:GO:0005891 GO:GO:0005245 eggNOG:COG1226
InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763
HOGENOM:HOG000231529 OrthoDB:EOG4RR6GD PANTHER:PTHR10037:SF47
GeneTree:ENSGT00680000099727 OMA:PGRQFHG EMBL:BX649380
EMBL:BX248410 IPI:IPI00498290 UniGene:Dr.83683 SMR:Q5TZF1
Ensembl:ENSDART00000132909 InParanoid:Q5TZF1 Uniprot:Q5TZF1
Length = 2196
Score = 189 (71.6 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 49/176 (27%), Positives = 92/176 (52%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIES--------TEV 70
A ++ P N R + I+ H +F+ I+ IL + I + +S +
Sbjct: 891 AFFIFSPSNKFRVLCHKIVNHNIFTNLILFFILLSSISLAAEDPVKNDSFRNQILGYADY 950
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAALR 127
+FTGI+T E +K+ A G L ++ R+ +N LD +V++++ ++ GI + + LR
Sbjct: 951 VFTGIFTIEIILKMTAYGAFLHKGSFCRNYFNILDLVVVSVSLISSGIQSSAINVVKILR 1010
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 1011 VLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTSLLQFMFACIGVQLFKGK 1066
Score = 183 (69.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 44/135 (32%), Positives = 76/135 (56%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-------- 116
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + +
Sbjct: 169 LERVEYLFLIIFTVEAFLKVIAYGLLCHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKG 228
Query: 117 --GIDLGNLAA------LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
G +G AA LR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 229 DGGTSMGGKAAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 288
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 289 IIIYAIIGLELFMGK 303
Score = 142 (55.0 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 37/103 (35%), Positives = 54/103 (52%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--P-----GTPT---IEST 68
AL L NPIRR I I+ F + I+ TI NC+ + + P T +E
Sbjct: 113 ALLCLTLKNPIRRACINIVEWKPFEIIILMTIFANCVALAVYIPFPEDDSNATNSNLERV 172
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 173 EYLFLIIFTVEAFLKVIAYGLLCHPNAYLRNGWNLLDFIIVVV 215
Score = 90 (36.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTN--CILMIMPG-----TPTIESTEVIFTGIYT 77
P NP + Y++ F + T IL N C+ M G + ++FTG++T
Sbjct: 1216 PKNPYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQSQSFNKAMNILNMLFTGLFT 1275
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVI 109
E +K++A + Y D WN DF+++
Sbjct: 1276 VEMILKLIA----FKPRGYFSDPWNVFDFLIV 1303
Score = 77 (32.2 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ R FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1372 SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1428
>FB|FBgn0264386 [details] [associations]
symbol:Ca-alpha1T "Ca[2+]-channel protein alpha[[1]] subunit
T" species:7227 "Drosophila melanogaster" [GO:0008332 "low
voltage-gated calcium channel activity" evidence=ISS;IMP;NAS]
[GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA;NAS] [GO:0005262 "calcium channel activity"
evidence=NAS] [GO:0070588 "calcium ion transmembrane transport"
evidence=IEA] InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR01629 EMBL:AE014298 GO:GO:0005891 eggNOG:COG1226
GO:GO:0008332 KO:K05315 GeneTree:ENSGT00650000092939
RefSeq:NP_001096889.1 ProteinModelPortal:A8JUY8 SMR:A8JUY8
STRING:A8JUY8 PaxDb:A8JUY8 EnsemblMetazoa:FBtr0112953 GeneID:31550
KEGG:dme:Dmel_CG15899 UCSC:CG15899-RC CTD:31550 FlyBase:FBgn0264386
OMA:CKILQIF OrthoDB:EOG4JQ2CC PhylomeDB:A8JUY8 ChiTaRS:Ca-alpha1T
GenomeRNAi:31550 NextBio:774156 Bgee:A8JUY8 Uniprot:A8JUY8
Length = 3205
Score = 190 (71.9 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 55/164 (33%), Positives = 89/164 (54%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIESTEV--------IFTGI----YT 77
R + ++ +P F I IL NCI + M P ++ V IF I +
Sbjct: 291 RNWCLMLITNPWFERVSILVILLNCITLGMY-QPCVDDACVTNRCKILQIFDDIIFAFFA 349
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDF-IVIA--LAYVTMGIDLGNLAALRTFRVLRA 134
E +K++A G I TYL D+WN LDF IV+A L YV M ++ NL A+RT RVLR
Sbjct: 350 LEMTIKMVAMG-ICGKNTYLADSWNRLDFFIVLAGLLEYV-MHVENLNLTAIRTIRVLRP 407
Query: 135 LKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ + +P ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 408 LRAINRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIIGVQ 451
Score = 168 (64.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 44/183 (24%), Positives = 92/183 (50%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPTIESTE------- 69
+L++ N R++ + + F ++ I NCI + M P P STE
Sbjct: 2141 SLYIFPEDNRFRQICTWFVNQKWFDNVVLLFIALNCITLAMERPNIPP-SSTERLFLATA 2199
Query: 70 -VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA--- 125
+FT ++T E +KV+A G Y WN +D ++ ++ + + + L + ++
Sbjct: 2200 NYVFTVVFTVEMFIKVVATGMFYGHDAYFTSGWNIMDGSLVTISIIDLLMSLISESSPRI 2259
Query: 126 ---LRTFRVLRALKTVAIV---PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQD 179
LR FR+LR+L+ + ++ PGLK +V ++ S++ + +++++ +F ++G+Q
Sbjct: 2260 FGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGVQL 2319
Query: 180 SRG 182
+G
Sbjct: 2320 FKG 2322
Score = 161 (61.7 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 50/171 (29%), Positives = 87/171 (50%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIM------PG-TPTIESTEVIFTGIYTFESA 81
IRR ++ H F I+ IL N + M + P T +E++ V+F+GI+ E
Sbjct: 1220 IRRYIRRLVEHKYFQQGILLAILINTLSMGIEYHNQPPELTAIVETSNVVFSGIFAVEML 1279
Query: 82 VKVMARGFILESFTYLRDAWNWLDFIVIALAYVT-----MGIDLGN----LAALRTFRVL 132
+KV+A G F Y+ + +N D I++ L+ + MG G L+ LRTFR+L
Sbjct: 1280 LKVVAEG----PFRYIANGFNVFDGIIVILSAIEICQTFMGNGTGGGGSGLSVLRTFRLL 1335
Query: 133 RALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
R LK V +P L+ + ++ ++ N+ L + + +F+++G+ GK
Sbjct: 1336 RILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFIFSILGMYLFGGK 1386
>UNIPROTKB|F1SHR7 [details] [associations]
symbol:F1SHR7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005451 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 GO:GO:0005891 GO:GO:0005245 PANTHER:PTHR10037:SF47
GeneTree:ENSGT00680000099727 EMBL:CU457639
Ensembl:ENSSSCT00000000827 OMA:ACVASEH Uniprot:F1SHR7
Length = 465
Score = 178 (67.7 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 43/134 (32%), Positives = 77/134 (57%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID------ 119
E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 1 ERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKAD 60
Query: 120 ----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F +
Sbjct: 61 GANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI 120
Query: 170 SVFALMGLQDSRGK 183
++A++GL+ GK
Sbjct: 121 IIYAIIGLELFMGK 134
>UNIPROTKB|F1S1Y7 [details] [associations]
symbol:SCN9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048266 "behavioral response to pain" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0009636
"response to toxic substance" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA] [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 SMART:SM00015
GO:GO:0009636 GO:GO:0048266 GO:GO:0006954 GO:GO:0009791
GO:GO:0035725 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 InterPro:IPR024583 Pfam:PF11933
OMA:LMNVSQN EMBL:CU915444 EMBL:AEMK01122369 EMBL:CU468079
Ensembl:ENSSSCT00000017327 Uniprot:F1S1Y7
Length = 1689
Score = 185 (70.2 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNC-------ILMIMPGTPTI--ESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + I + T I E + IFT I+ E
Sbjct: 882 IRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILE 941
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A G+ TY +AW WLDF+++ ++ VT+ G DLG + +LRT R LR
Sbjct: 942 MLLKWVAYGYK----TYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALR 997
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A+I ++ ++ +V+++ + +F++MG+ GK
Sbjct: 998 PLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 1047
Score = 185 (70.2 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 12 FRFSATDALWVLDPF-NPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTP-TIESTE 69
+RF+ T +W P+ +++ +I++ P L I I+ N + M M P T E
Sbjct: 415 YRFAHTFLIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKN 474
Query: 70 V------IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN 122
V +FTGI+ E +K++A+ + + Y + WN D +++ L+ V + + D+
Sbjct: 475 VLTVGNLVFTGIFAAEMVLKLIAKD---DPYEYFQVGWNIFDSLIVTLSLVELFLADVEG 531
Query: 123 LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L+ LR+FR+LR K P L ++ + SV L ++ ++ + +FA++G+Q
Sbjct: 532 LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ 587
>ZFIN|ZDB-GENE-090312-128 [details] [associations]
symbol:cacna1hb "calcium channel,
voltage-dependent, T type, alpha 1H subunit b" species:7955 "Danio
rerio" [GO:0070588 "calcium ion transmembrane transport"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005244 "voltage-gated ion channel
activity" evidence=IEA] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=IEA] InterPro:IPR002077 InterPro:IPR005445
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01629
ZFIN:ZDB-GENE-090312-128 EMBL:AL928835 GO:GO:0005891 GO:GO:0005245
GeneTree:ENSGT00650000092939 EMBL:CR933522 IPI:IPI00866346
Ensembl:ENSDART00000103611 Uniprot:F1QNG3
Length = 2016
Score = 185 (70.2 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 55/185 (29%), Positives = 96/185 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE------- 69
+L++ P N R ++ H +F ++ I NCI + + P I+ STE
Sbjct: 1077 SLYLFAPQNNFRMRCQKVITHKMFDHIVLFFIFFNCITIALE-RPDIQPDSTERIFLKVS 1135
Query: 70 -VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL----GN-- 122
IFT I+ E VKV++ G +YL+ +WN LD ++ ++ V + + L GN
Sbjct: 1136 NYIFTVIFVAEMTVKVVSLGLYAGPGSYLKSSWNVLDGFLVFVSIVDILVSLASSGGNRI 1195
Query: 123 LAALRTFRVLRALKTVAIV----PGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
L LR R+LR L+ ++ V PGLK +V +I S++ + +++++ VF ++G+Q
Sbjct: 1196 LGILRVLRLLRTLRPLSRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQ 1255
Query: 179 DSRGK 183
+GK
Sbjct: 1256 LFKGK 1260
Score = 151 (58.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 34/112 (30%), Positives = 63/112 (56%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G + YL D WN LD ++ + +D N++ A+
Sbjct: 41 DFIFA-FFAVEMVVKMVALG-VFGPKCYLGDTWNRLDLFIVMAGMLEYSLDGHNVSFSAI 98
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 99 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 150
Score = 149 (57.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 32/117 (27%), Positives = 66/117 (56%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-GIDL 120
T +E + ++FT ++ E +K+ A G F Y+ + +N D I++ ++ + G
Sbjct: 646 TDVLEISNIVFTSLFVLEMLLKLSACGL----FDYISNPYNIFDGIIVIISVCEIVGQAD 701
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G + LRTFR+LR LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 702 GGFSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 758
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 41/171 (23%), Positives = 81/171 (47%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG--TPT-----IESTEVIFTGIYTF 78
++P R + LFI I N + M M P ++ FT ++
Sbjct: 1402 YSPTRLYIHTLCTSHYLDLFITIIIAINVLTMSMEHYRQPKYLDEGLKYCNYFFTLVFVI 1461
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY--VTMG-IDLG-----NLAALRTFR 130
E+A+K++A GF + ++ WN LD ++ L+ +T+ IDL N +R R
Sbjct: 1462 EAALKLVAFGFR----RFFKERWNQLDLAIVLLSIMGITLEEIDLNASLPINPTIIRIMR 1517
Query: 131 VLR---ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
VLR LK + + G++ ++ V++++ + ++ +L M ++A +G++
Sbjct: 1518 VLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE 1568
Score = 42 (19.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 95 FSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 140
>UNIPROTKB|F1NSL0 [details] [associations]
symbol:F1NSL0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520
Pfam:PF06512 GO:GO:0005248 GO:GO:0001518
GeneTree:ENSGT00560000076721 EMBL:AADN02056683 EMBL:AADN02056684
EMBL:AADN02056685 IPI:IPI00810797 Ensembl:ENSGALT00000017810
ArrayExpress:F1NSL0 Uniprot:F1NSL0
Length = 288
Score = 169 (64.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 43/170 (25%), Positives = 89/170 (52%)
Query: 29 IRRVAIYILVHPLFSLFIITTILTNCILMIMPGT---------PTIESTEVIFTGIYTFE 79
IR+ I+ H F FI+ IL + + +E + +F+ I+ E
Sbjct: 68 IRKTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIFVIE 127
Query: 80 SAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTM-----GI-DLGNLAALRTFRVLR 133
+K +A GF + Y +AW WLDF+++ ++ +++ G +LG + +LRT R LR
Sbjct: 128 MLLKWVAYGFKV----YFTNAWCWLDFLIVDVSLISLTANWLGYSELGAIKSLRTLRALR 183
Query: 134 ALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
L+ ++ G++ +V A++ ++ ++ +V+++ + +F++MG+ GK
Sbjct: 184 PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGK 233
>UNIPROTKB|E2R486 [details] [associations]
symbol:CACNA1S "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005450 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 PRINTS:PR01634 GO:GO:0005891 GO:GO:0005245
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
GeneTree:ENSGT00680000099727 PANTHER:PTHR10037:SF105 CTD:779
KO:K04857 OMA:PPVMANQ EMBL:AAEX03005027 RefSeq:XP_848685.3
Ensembl:ENSCAFT00000017400 GeneID:490244 KEGG:cfa:490244
Uniprot:E2R486
Length = 1873
Score = 182 (69.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 46/176 (26%), Positives = 91/176 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIEST--------EV 70
+ ++ P N IR + I+ F+ FI+ IL + + ES ++
Sbjct: 778 SFFIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRAESVRNQILGYFDI 837
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---LR 127
FT ++T E +K+ G L ++ R+ +N LD +V+A++ ++MG++ ++ LR
Sbjct: 838 AFTSVFTVEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLISMGLESSTISVVKILR 897
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR L+ + GLK +V V +++ + +++++T +FA +G+Q +GK
Sbjct: 898 VLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGK 953
Score = 158 (60.7 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 49/177 (27%), Positives = 85/177 (48%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMI----MPGTPT------IEST 68
AL+ L NP+R+ I I+ F I+ TI NC+ + MP +E
Sbjct: 30 ALFCLTLQNPLRKACINIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNTLNLGLEKL 89
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRT 128
E F +++ E+A+K++A GF+ YLR WN LDFI++ L T+ ++ N+ T
Sbjct: 90 EYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFIIVFLGVFTVILEQVNVIQSNT 149
Query: 129 FRV--------LRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ ++AL+ ++ L+ + G + S++ + + I M L AL+ L
Sbjct: 150 APMSSKGAGLDVKALRAFRVLRPLRLVSG--VPSLQVVLNSIFKAMLPLFHIALLVL 204
>UNIPROTKB|F5H638 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 GO:GO:0005891 GO:GO:0005245 EMBL:AC005342
PANTHER:PTHR10037:SF47 EMBL:AC005293 EMBL:AC005344 EMBL:AC005414
EMBL:AC005866 EMBL:AC006051 EMBL:AC007618 IPI:IPI00828210
HGNC:HGNC:1390 ChiTaRS:CACNA1C ProteinModelPortal:F5H638 SMR:F5H638
Ensembl:ENST00000480911 ArrayExpress:F5H638 Bgee:F5H638
Uniprot:F5H638
Length = 1279
Score = 180 (68.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 169 (64.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 36/120 (30%), Positives = 70/120 (58%)
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNL 123
+ + +FT I+T E +K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 935 NADYVFTSIFTLEIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVV 994
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 995 KILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1054
Score = 144 (55.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
>UNIPROTKB|F1NZX9 [details] [associations]
symbol:LOC429167 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005891 "voltage-gated calcium channel complex"
evidence=IEA] [GO:0007188 "adenylate cyclase-modulating G-protein
coupled receptor signaling pathway" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0008331 "high
voltage-gated calcium channel activity" evidence=IEA] [GO:0030018
"Z disc" evidence=IEA] [GO:0030506 "ankyrin binding" evidence=IEA]
[GO:0051393 "alpha-actinin binding" evidence=IEA] [GO:0051928
"positive regulation of calcium ion transport" evidence=IEA]
[GO:0060372 "regulation of atrial cardiac muscle cell membrane
repolarization" evidence=IEA] [GO:0070509 "calcium ion import"
evidence=IEA] [GO:0086052 "membrane repolarization involved in
regulation of SA node cell action potential" evidence=IEA]
[GO:0086059 "voltage-gated calcium channel activity involved in
regulation of SA node cell action potential" evidence=IEA]
[GO:0086091 "regulation of heart rate by cardiac conduction"
evidence=IEA] [GO:1901016 "regulation of potassium ion
transmembrane transporter activity" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005452
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01636 GO:GO:0007188 GO:GO:0005891 GO:GO:0008331
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
GeneTree:ENSGT00680000099727 IPI:IPI00597919 OMA:TCFFADS
EMBL:AADN02013987 EMBL:AADN02013983 EMBL:AADN02013984
EMBL:AADN02013985 EMBL:AADN02013986 Ensembl:ENSGALT00000008554
ArrayExpress:F1NZX9 Uniprot:F1NZX9
Length = 2167
Score = 182 (69.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 49/177 (27%), Positives = 92/177 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPTIES--------TE 69
A ++ NPIR V + L+ H +F+ I+ I+ + + + S +
Sbjct: 863 AFFIFSSTNPIR-VGCHRLINHHIFTNLILVFIMLSSVSLAAEDPIRSHSFRNNILGYAD 921
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---L 126
+FT ++TFE +K+ A G L ++ R+ +N LD +V+ ++ V+ GI ++ L
Sbjct: 922 YVFTSMFTFEIILKMTAFGAFLHKGSFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKIL 981
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
R RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 982 RVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGK 1038
Score = 147 (56.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 51/178 (28%), Positives = 89/178 (50%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--P-----GTPT---IEST 68
AL+ L NPIRR I ++ F +FI+ +I NC+ + + P T +E
Sbjct: 86 ALFCLSLNNPIRRACISLVEWKPFDIFILLSIFANCVALAVYIPFPEDDSNSTNHNLEKV 145
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-------LAYVTMGIDLG 121
E F I+T E+ +K++A G +L Y+R+ WN LDF+++ L +T + G
Sbjct: 146 EYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVVVGLFSVILEQLTKETEGG 205
Query: 122 NLAALRT--FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ + + F V +AL+ ++ L+ + G + S++ + + II M L AL+ L
Sbjct: 206 SHSGGKPGGFDV-KALRAFRVLRPLRLVSG--VPSLQVVLNSIIKAMVPLLHIALLVL 260
>UNIPROTKB|O73700 [details] [associations]
symbol:CACNA1D "Voltage-dependent L-type calcium channel
subunit alpha-1D" species:9031 "Gallus gallus" [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] [GO:0007188 "adenylate
cyclase-modulating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0008331 "high voltage-gated calcium channel
activity" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0030506 "ankyrin binding" evidence=IEA] [GO:0051393
"alpha-actinin binding" evidence=IEA] [GO:0051928 "positive
regulation of calcium ion transport" evidence=IEA] [GO:0060372
"regulation of atrial cardiac muscle cell membrane repolarization"
evidence=IEA] [GO:0070509 "calcium ion import" evidence=IEA]
[GO:0086052 "membrane repolarization involved in regulation of SA
node cell action potential" evidence=IEA] [GO:0086059
"voltage-gated calcium channel activity involved in regulation of
SA node cell action potential" evidence=IEA] [GO:0086091
"regulation of heart rate by cardiac conduction" evidence=IEA]
[GO:1901016 "regulation of potassium ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005452 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 PRINTS:PR01636 GO:GO:0046872 GO:GO:0007188
GO:GO:0005891 eggNOG:COG1226 GO:GO:0008331 InterPro:IPR014873
SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763 HOGENOM:HOG000231529
EMBL:AF027602 EMBL:AF027603 EMBL:AF027604 EMBL:AF027605
EMBL:AF027606 IPI:IPI00574844 IPI:IPI00578596 IPI:IPI00581994
IPI:IPI00584941 IPI:IPI00587580 IPI:IPI00594925 IPI:IPI00597919
IPI:IPI00600456 RefSeq:NP_990365.1 UniGene:Gga.51515
UniGene:Gga.51516 UniGene:Gga.52031 UniGene:Gga.528
ProteinModelPortal:O73700 SMR:O73700 STRING:O73700 PRIDE:O73700
GeneID:395895 KEGG:gga:395895 CTD:776 InParanoid:O73700 KO:K04851
NextBio:20815960 Uniprot:O73700
Length = 2190
Score = 182 (69.1 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 49/177 (27%), Positives = 92/177 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILV-HPLFSLFIITTILTNCILMIMPGTPTIES--------TE 69
A ++ NPIR V + L+ H +F+ I+ I+ + + + S +
Sbjct: 886 AFFIFSSTNPIR-VGCHRLINHHIFTNLILVFIMLSSVSLAAEDPIRSHSFRNNILGYAD 944
Query: 70 VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---L 126
+FT ++TFE +K+ A G L ++ R+ +N LD +V+ ++ V+ GI ++ L
Sbjct: 945 YVFTSMFTFEIILKMTAFGAFLHKGSFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKIL 1004
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
R RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 1005 RVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGK 1061
Score = 147 (56.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 51/178 (28%), Positives = 89/178 (50%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--P-----GTPT---IEST 68
AL+ L NPIRR I ++ F +FI+ +I NC+ + + P T +E
Sbjct: 100 ALFCLSLNNPIRRACISLVEWKPFDIFILLSIFANCVALAVYIPFPEDDSNSTNHNLEKV 159
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIA-------LAYVTMGIDLG 121
E F I+T E+ +K++A G +L Y+R+ WN LDF+++ L +T + G
Sbjct: 160 EYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVVVGLFSVILEQLTKETEGG 219
Query: 122 NLAALRT--FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
+ + + F V +AL+ ++ L+ + G + S++ + + II M L AL+ L
Sbjct: 220 SHSGGKPGGFDV-KALRAFRVLRPLRLVSG--VPSLQVVLNSIIKAMVPLLHIALLVL 274
>UNIPROTKB|Q19R18 [details] [associations]
symbol:CACNA1G "Voltage-dependent T-type calcium channel
subunit alpha-1G" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01629
GO:GO:0005891 GO:GO:0005245 UniGene:Hs.591169 HGNC:HGNC:1394
HOVERGEN:HBG050764 ChiTaRS:CACNA1G HOGENOM:HOG000007742
EMBL:AC004590 EMBL:AC021491 EMBL:DQ494449 IPI:IPI01013285
STRING:Q19R18 Ensembl:ENST00000503607 Uniprot:Q19R18
Length = 1735
Score = 166 (63.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1352
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1412
Query: 182 GK 183
GK
Sbjct: 1413 GK 1414
Score = 166 (63.5 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1234 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1292
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1352
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1405
Score = 43 (20.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>UNIPROTKB|Q19R16 [details] [associations]
symbol:CACNA1G "T calcium channel alpha 1G subunit variant
33" species:9606 "Homo sapiens" [GO:0005245 "voltage-gated calcium
channel activity" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] InterPro:IPR005445
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01629 GO:GO:0005891
GO:GO:0005245 UniGene:Hs.591169 HGNC:HGNC:1394 HOVERGEN:HBG050764
ChiTaRS:CACNA1G HOGENOM:HOG000007742 EMBL:AC004590 EMBL:AC021491
EMBL:DQ494451 IPI:IPI00964592 STRING:Q19R16 Ensembl:ENST00000511768
Uniprot:Q19R16
Length = 1746
Score = 166 (63.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1352
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1412
Query: 182 GK 183
GK
Sbjct: 1413 GK 1414
Score = 166 (63.5 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1234 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1292
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1352
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1405
Score = 43 (20.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>UNIPROTKB|Q19R15 [details] [associations]
symbol:CACNA1G "Voltage-dependent T-type calcium channel
subunit alpha-1G" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01629
GO:GO:0005891 GO:GO:0005245 UniGene:Hs.591169 HGNC:HGNC:1394
HOVERGEN:HBG050764 ChiTaRS:CACNA1G HOGENOM:HOG000007742
EMBL:AC004590 EMBL:AC021491 EMBL:DQ494452 IPI:IPI00966179
STRING:Q19R15 Ensembl:ENST00000503436 Uniprot:Q19R15
Length = 1753
Score = 166 (63.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1352
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1412
Query: 182 GK 183
GK
Sbjct: 1413 GK 1414
Score = 166 (63.5 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1234 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1292
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1352
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1405
Score = 43 (20.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>UNIPROTKB|Q19R09 [details] [associations]
symbol:CACNA1G "Voltage-dependent T-type calcium channel
subunit alpha-1G" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005445 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01629 GO:GO:0005891
GO:GO:0005245 UniGene:Hs.591169 HGNC:HGNC:1394 HOVERGEN:HBG050764
ChiTaRS:CACNA1G HOGENOM:HOG000007742 EMBL:AC004590 EMBL:AC021491
EMBL:DQ494458 IPI:IPI00967839 STRING:Q19R09 Ensembl:ENST00000511765
Uniprot:Q19R09
Length = 1758
Score = 166 (63.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1435
Query: 182 GK 183
GK
Sbjct: 1436 GK 1437
Score = 166 (63.5 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1257 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1315
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1428
Score = 43 (20.2 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>UNIPROTKB|Q19R01 [details] [associations]
symbol:CACNA1G "T calcium channel alpha 1G subunit variant
209" species:9606 "Homo sapiens" [GO:0005245 "voltage-gated calcium
channel activity" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] InterPro:IPR002077
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01629 GO:GO:0005891 GO:GO:0005245 UniGene:Hs.591169
HGNC:HGNC:1394 HOVERGEN:HBG050764 ChiTaRS:CACNA1G
HOGENOM:HOG000007742 EMBL:AC004590 EMBL:AC021491 EMBL:DQ494466
IPI:IPI00967763 STRING:Q19R01 Ensembl:ENST00000504076
Uniprot:Q19R01
Length = 1765
Score = 166 (63.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1435
Query: 182 GK 183
GK
Sbjct: 1436 GK 1437
Score = 166 (63.5 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1257 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1315
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1428
Score = 43 (20.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>UNIPROTKB|Q19R05 [details] [associations]
symbol:CACNA1G "T calcium channel alpha 1G subunit variant
177" species:9606 "Homo sapiens" [GO:0005245 "voltage-gated calcium
channel activity" evidence=IEA] [GO:0005891 "voltage-gated calcium
channel complex" evidence=IEA] InterPro:IPR002077
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01629 GO:GO:0005891 GO:GO:0005245 UniGene:Hs.591169
HGNC:HGNC:1394 HOVERGEN:HBG050764 ChiTaRS:CACNA1G
HOGENOM:HOG000007742 EMBL:AC004590 EMBL:AC021491 EMBL:DQ494462
IPI:IPI00965139 STRING:Q19R05 Ensembl:ENST00000506406
Uniprot:Q19R05
Length = 1776
Score = 166 (63.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1435
Query: 182 GK 183
GK
Sbjct: 1436 GK 1437
Score = 166 (63.5 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1257 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1315
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1428
Score = 43 (20.2 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>ZFIN|ZDB-GENE-030616-135 [details] [associations]
symbol:cacna1da "calcium channel,
voltage-dependent, L type, alpha 1D subunit, a" species:7955 "Danio
rerio" [GO:0070588 "calcium ion transmembrane transport"
evidence=IEA] [GO:0005245 "voltage-gated calcium channel activity"
evidence=IEA;ISS] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IMP] [GO:0009925
"basal plasma membrane" evidence=IDA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0034765 "regulation
of ion transmembrane transport" evidence=IEA;ISS] [GO:0016021
"integral to membrane" evidence=IEA;ISS;NAS] [GO:0050974 "detection
of mechanical stimulus involved in sensory perception"
evidence=IMP] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0006816 "calcium ion transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
ZFIN:ZDB-GENE-030616-135 GO:GO:0016021 GO:GO:0050885 GO:GO:0050910
GO:GO:0009925 GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873
SMART:SM01062 Pfam:PF08763 GeneTree:ENSGT00680000099727
EMBL:BX571969 EMBL:CABZ01048888 EMBL:CABZ01048889 EMBL:CABZ01048890
EMBL:CABZ01065553 EMBL:CABZ01065554 EMBL:CABZ01065555
EMBL:CABZ01082642 IPI:IPI00509397 Ensembl:ENSDART00000089956
Bgee:F1R8Q5 Uniprot:F1R8Q5
Length = 2083
Score = 176 (67.0 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 49/177 (27%), Positives = 91/177 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILV-HPLFS-LFIITTILTNCILMIMPGTPTIESTEVI----- 71
A ++ NP+R VA + L+ H +F+ L ++ +L++ L + +I
Sbjct: 808 AFFIFSNTNPVR-VACHKLINHHIFTNLILVFIMLSSASLAAEDPIRNFSARNIILGYFD 866
Query: 72 --FTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---L 126
FT I+T E +K+ G L + R+ +N LD +V+ ++ V+ GI ++ L
Sbjct: 867 YAFTAIFTVEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKIL 926
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
R RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 927 RVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGK 983
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 41/170 (24%), Positives = 81/170 (47%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--GTPTI-----ESTEVIFTGIYT 77
P NP + Y++ F + IL N I + + G + + ++FT ++T
Sbjct: 1133 PKNPYQYKFWYVVNSTGFEYIMFVLILLNTICLAVQHYGQSELFNYVMDILNMVFTAVFT 1192
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN--------LAALRT 128
E +K++A + Y DAWN D +++ + V + I ++ N + R
Sbjct: 1193 VEMVLKLIA----FKPRHYFTDAWNTFDALIVVGSVVDIAITEVNNTEDSARISITFFRL 1248
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
FRV+R +K ++ G++T++ I+S + L V +L ++A++G+Q
Sbjct: 1249 FRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQ 1298
Score = 124 (48.7 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 32/114 (28%), Positives = 60/114 (52%)
Query: 19 ALWVLDPFNPIRRVAIYILV--HPLFSLFIITTILTNC--ILMIMPGTPT--------IE 66
AL+ L+ NPIRR I ++ +PL LF+ I C + + P +E
Sbjct: 57 ALFCLNLNNPIRRACISLVEWKYPL--LFVKLKIFKKCTNVKTVFPFPKHRSSSFIHFLE 114
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDL 120
+ E F I+T E+ +K++A G ++ Y+R+ WN LDF+++ + ++ +++
Sbjct: 115 TVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIGLFSVVLEV 168
Score = 112 (44.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F + ++A++GL+
Sbjct: 196 DVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFI 255
Query: 182 GK 183
GK
Sbjct: 256 GK 257
>UNIPROTKB|F1NJP7 [details] [associations]
symbol:F1NJP7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] InterPro:IPR002077 InterPro:IPR005446
InterPro:IPR005451 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01630 GO:GO:0005891 GO:GO:0005245 IPI:IPI00583721
PANTHER:PTHR10037:SF47 GeneTree:ENSGT00680000099727
EMBL:AADN02006507 EMBL:AADN02006508 EMBL:AADN02006509
EMBL:AADN02006510 EMBL:AADN02006511 EMBL:AADN02006512
EMBL:AADN02006513 Ensembl:ENSGALT00000021261 ArrayExpress:F1NJP7
Uniprot:F1NJP7
Length = 1372
Score = 179 (68.1 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 44/134 (32%), Positives = 76/134 (56%)
Query: 66 ESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI------D 119
E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + + D
Sbjct: 1 ERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKAD 60
Query: 120 LGN----------LAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSL 169
GN + ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F +
Sbjct: 61 GGNSIGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVI 120
Query: 170 SVFALMGLQDSRGK 183
++A++GL+ GK
Sbjct: 121 IIYAIIGLELFMGK 134
Score = 169 (64.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 36/120 (30%), Positives = 70/120 (58%)
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNL 123
+ + +FT I+T E +K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 739 NADYVFTSIFTLEIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVV 798
Query: 124 AALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 799 KILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 858
Score = 131 (51.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 43/170 (25%), Positives = 83/170 (48%)
Query: 25 PFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMP--GTPTI--ESTEVI---FTGIYT 77
P N + Y++ F + IL N I + M G + E+ ++ FTG++T
Sbjct: 1010 PKNQYQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCMFKEAMNILNMLFTGLFT 1069
Query: 78 FESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGI-DLGN--------LAALRT 128
E +K++A + Y DAWN D +++ + V + I ++ N + R
Sbjct: 1070 VEMVLKLIA----FKPKHYFCDAWNTFDALIVVGSIVDIAITEVNNAEENSRISITFFRL 1125
Query: 129 FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1126 FRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1175
>RGD|70983 [details] [associations]
symbol:Cacna1s "calcium channel, voltage-dependent, L type, alpha
1S subunit" species:10116 "Rattus norvegicus" [GO:0001501 "skeletal
system development" evidence=ISO] [GO:0001503 "ossification"
evidence=NAS] [GO:0002074 "extraocular skeletal muscle development"
evidence=ISO] [GO:0005245 "voltage-gated calcium channel activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005891 "voltage-gated calcium
channel complex" evidence=ISO;IDA] [GO:0006816 "calcium ion
transport" evidence=ISO;IDA] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0006941 "striated muscle contraction"
evidence=ISO] [GO:0007029 "endoplasmic reticulum organization"
evidence=ISO] [GO:0007519 "skeletal muscle tissue development"
evidence=ISO] [GO:0007520 "myoblast fusion" evidence=ISO]
[GO:0007528 "neuromuscular junction development" evidence=ISO]
[GO:0008331 "high voltage-gated calcium channel activity"
evidence=ISO;IDA] [GO:0016529 "sarcoplasmic reticulum" evidence=ISO]
[GO:0030315 "T-tubule" evidence=ISO] [GO:0031674 "I band"
evidence=ISO] [GO:0042383 "sarcolemma" evidence=IDA] [GO:0043501
"skeletal muscle adaptation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048741 "skeletal muscle fiber
development" evidence=ISO] [GO:0055001 "muscle cell development"
evidence=ISO] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] InterPro:IPR005450 InterPro:IPR005821 Pfam:PF00520
RGD:70983 GO:GO:0046872 GO:GO:0042383 GO:GO:0001503 GO:GO:0005891
GO:GO:0005245 InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763
Pfam:PF08763 PANTHER:PTHR10037:SF105 EMBL:L04684 EMBL:M99220
EMBL:U31816 IPI:IPI00231299 IPI:IPI00911329 PIR:A46422
UniGene:Rn.10738 UniGene:Rn.220579 ProteinModelPortal:Q02485
SMR:Q02485 PRIDE:Q02485 BindingDB:Q02485 ChEMBL:CHEMBL4108
Genevestigator:Q02485 Uniprot:Q02485
Length = 1146
Score = 178 (67.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 45/176 (25%), Positives = 91/176 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG--------TPTIESTEV 70
+ ++ P N IR + I+ F+ FI+ IL + + +E +
Sbjct: 65 SFFIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRADSMRNQILEYFDY 124
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAA---LR 127
+FT ++T E +K+ G L ++ R+ +N LD +V+A++ ++MG++ ++ LR
Sbjct: 125 VFTAVFTVEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLISMGLESSAISVVKILR 184
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR L+ + GLK +V V +++ + +++++T +FA +G+Q +GK
Sbjct: 185 VLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGK 240
>UNIPROTKB|J9NV68 [details] [associations]
symbol:CACNA1I "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] InterPro:IPR002077 InterPro:IPR005445
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01629
GO:GO:0005891 GO:GO:0005245 CTD:8911 KO:K04856
GeneTree:ENSGT00650000092939 OMA:ARSPSWA EMBL:AAEX03007306
EMBL:AAEX03007307 RefSeq:XP_538364.3 Ensembl:ENSCAFT00000046802
GeneID:481243 KEGG:cfa:481243 Uniprot:J9NV68
Length = 2190
Score = 181 (68.8 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCIL--MIMPG------TPTIESTEVIFTGIYTF--- 78
R I ++ +P F + IL NC+ M P + + +V I+ F
Sbjct: 69 RNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMDCLSDRCKILQVFDDFIFVFFAM 128
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN--LAALRTFRVLRALK 136
E +K++A G I YL D WN LDF ++ V +DL N L+A+RT RVLR LK
Sbjct: 129 EMVLKMVALG-IFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLK 187
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 188 AINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQ 229
Score = 166 (63.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-FIV-IALAYVTMGID-------LG 121
IFT I+ E +KV++ G YLR +WN LD F+V +++ + + + LG
Sbjct: 1174 IFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKILG 1233
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ PGLK +V +I S+K + +++++ +F ++G+Q +
Sbjct: 1234 VLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFK 1293
Query: 182 GK 183
GK
Sbjct: 1294 GK 1295
Score = 160 (61.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 36/117 (30%), Positives = 68/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E V+FT ++ E +K+ A G F YLR+ +N D I++ ++ + +G
Sbjct: 633 TNILEICNVVFTSMFALEMLLKLAAFGL----FDYLRNPYNIFDSIIVIISIWEIVGQAD 688
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR+LR LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 689 GGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 745
Score = 152 (58.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE------- 69
++++ P N R + I+ H LF ++ I NCI + + P IE STE
Sbjct: 1113 SVYLFSPENRFRVLCQTIIAHKLFDYVVLAFIFLNCITIALE-RPQIEAGSTERIFLTVS 1171
Query: 70 -VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-FIV-IALAYVTMGI-DLGNLAA 125
IFT I+ E +KV++ G YLR +WN LD F+V +++ + + + G
Sbjct: 1172 NYIFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKI 1231
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGA--VIES-VKNLRDVIILTMFSLSVFALMGL 177
L RVLR L+T+ + + G V+E+ + +L+ + + + + F + G+
Sbjct: 1232 LGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGI 1286
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 42/168 (25%), Positives = 81/168 (48%)
Query: 36 ILVHPL-----FSLFIITTILTNCILMIMP--GTPTIESTEV-----IFTGIYTFESAVK 83
+L+H + +FI I N + M + PT T + +FT ++ E+ +K
Sbjct: 1442 LLIHSMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK 1501
Query: 84 VMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL----------RTFR 130
++A G L F +D WN LD ++ L+ MGI L + AAL R R
Sbjct: 1502 LVAFG--LRRF--FKDRWNQLDLAIVLLS--VMGITLEEIEINAALPINPTIIRIMRVLR 1555
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ R LK + + G++ ++ V++++ + ++ +L M ++A +G++
Sbjct: 1556 IARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE 1603
>UNIPROTKB|I3L2W8 [details] [associations]
symbol:CACNA1G "Voltage-dependent T-type calcium channel
subunit alpha-1G" species:9606 "Homo sapiens" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR005821 Pfam:PF00520 GO:GO:0016021
GO:GO:0005216 HGNC:HGNC:1394 ChiTaRS:CACNA1G EMBL:AC004590
EMBL:AC021491 Ensembl:ENST00000570567 Bgee:I3L2W8 Uniprot:I3L2W8
Length = 277
Score = 166 (63.5 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 4 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 61
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 62 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 113
>UNIPROTKB|E9PDJ1 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 GO:GO:0005891 GO:GO:0005245 EMBL:AC005342
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF47 EMBL:AC005293 EMBL:AC005344 EMBL:AC005414
EMBL:AC005866 EMBL:AC006051 EMBL:AC007618 IPI:IPI00954938
RefSeq:NP_001161095.1 UniGene:Hs.118262 GeneID:775 KEGG:hsa:775
CTD:775 HGNC:HGNC:1390 KO:K04850 ChiTaRS:CACNA1C GenomeRNAi:775
NextBio:3132 ProteinModelPortal:E9PDJ1 SMR:E9PDJ1 PRIDE:E9PDJ1
Ensembl:ENST00000399603 UCSC:uc001qkk.2 ArrayExpress:E9PDJ1
Bgee:E9PDJ1 Uniprot:E9PDJ1
Length = 2138
Score = 180 (68.4 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 937 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 996
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 997 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1054
Score = 144 (55.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
>MGI|MGI:103013 [details] [associations]
symbol:Cacna1c "calcium channel, voltage-dependent, L type,
alpha 1C subunit" species:10090 "Mus musculus" [GO:0002095
"caveolar macromolecular signaling complex" evidence=IDA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005244
"voltage-gated ion channel activity" evidence=IEA] [GO:0005245
"voltage-gated calcium channel activity" evidence=ISO;IMP;IDA;TAS]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005891 "voltage-gated calcium channel
complex" evidence=ISO;TAS] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006816 "calcium ion
transport" evidence=ISO;IMP;IDA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0006939 "smooth muscle contraction"
evidence=IMP] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=ISO] [GO:0007268 "synaptic transmission"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IGI]
[GO:0008217 "regulation of blood pressure" evidence=IMP]
[GO:0008331 "high voltage-gated calcium channel activity"
evidence=ISO] [GO:0008542 "visual learning" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0016020
"membrane" evidence=ISO;IDA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0017156 "calcium ion-dependent exocytosis"
evidence=IMP] [GO:0019229 "regulation of vasoconstriction"
evidence=IMP] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030018 "Z disc" evidence=ISO;IDA] [GO:0030073
"insulin secretion" evidence=IMP] [GO:0030252 "growth hormone
secretion" evidence=IDA] [GO:0030315 "T-tubule" evidence=ISO;TAS]
[GO:0030425 "dendrite" evidence=ISO] [GO:0034765 "regulation of ion
transmembrane transport" evidence=IEA] [GO:0042383 "sarcolemma"
evidence=ISO] [GO:0042593 "glucose homeostasis" evidence=IMP]
[GO:0042734 "presynaptic membrane" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO;IDA] [GO:0043198 "dendritic
shaft" evidence=IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044325 "ion channel binding" evidence=ISO] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051393 "alpha-actinin binding"
evidence=ISO] [GO:0051721 "protein phosphatase 2A binding"
evidence=ISO] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0060083 "smooth muscle contraction involved in micturition"
evidence=IMP] [GO:0070509 "calcium ion import" evidence=ISO]
[GO:0070588 "calcium ion transmembrane transport" evidence=IMP;IDA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 MGI:MGI:103013 GO:GO:0030018 GO:GO:0046872
GO:GO:0007268 GO:GO:0043198 GO:GO:0043025 GO:GO:0008542
GO:GO:0042593 GO:GO:0030315 Reactome:REACT_127416 GO:GO:0019229
GO:GO:0008217 GO:GO:0006874 GO:GO:0017156 GO:GO:0030073
GO:GO:0007628 GO:GO:0046620 GO:GO:0005891 GO:GO:0005245
eggNOG:COG1226 InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763
Pfam:PF08763 HOGENOM:HOG000231529 PANTHER:PTHR10037:SF47 CTD:775
KO:K04850 ChiTaRS:CACNA1C EMBL:L01776 EMBL:M57973 EMBL:L06233
EMBL:U17869 IPI:IPI00229513 IPI:IPI00277044 IPI:IPI00875159
PIR:A44467 RefSeq:NP_001153005.1 RefSeq:NP_033911.2
UniGene:Mm.436656 ProteinModelPortal:Q01815 SMR:Q01815
IntAct:Q01815 MINT:MINT-103522 STRING:Q01815 TCDB:1.A.1.11.6
PhosphoSite:Q01815 PaxDb:Q01815 PRIDE:Q01815
Ensembl:ENSMUST00000112825 GeneID:12288 KEGG:mmu:12288
UCSC:uc009dls.2 UCSC:uc012erl.1 GeneTree:ENSGT00680000099727
BindingDB:Q01815 ChEMBL:CHEMBL2529 NextBio:280766 Bgee:Q01815
Genevestigator:Q01815 GermOnline:ENSMUSG00000051331 GO:GO:0002095
GO:GO:0030252 GO:GO:0060083 Uniprot:Q01815
Length = 2139
Score = 180 (68.4 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 174 (66.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 48/176 (27%), Positives = 91/176 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM--PGTPT------IESTEV 70
A ++ P N R I+ +F+ I+ IL + I + P T + + +
Sbjct: 879 AFFIFSPNNRFRLQCHRIVNDTIFTNLILFFILLSSISLAAEDPVQHTSFRNHILGNADY 938
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAALR 127
+FT I+T E +K+ A G L ++ R+ +N LD +V++++ ++ GI + + LR
Sbjct: 939 VFTSIFTLEIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILR 998
Query: 128 TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 999 VLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1054
Score = 144 (55.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
>UNIPROTKB|E9PT56 [details] [associations]
symbol:Cacna1c "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 RGD:2245 GO:GO:0005891 GO:GO:0005245
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF47 GeneTree:ENSGT00680000099727 IPI:IPI00392650
Ensembl:ENSRNOT00000041571 ArrayExpress:E9PT56 Uniprot:E9PT56
Length = 2170
Score = 180 (68.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 189 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 248
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 249 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 308
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 309 IIIYAIIGLELFMGK 323
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 967 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 1026
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 1027 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1084
Score = 146 (56.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/103 (37%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I V F + I+ TI NC+ L I P +E
Sbjct: 133 ALLCLTLKNPIRRACISIAVTIPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 192
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 193 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 235
>UNIPROTKB|P15381 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9986 "Oryctolagus cuniculus" [GO:0005245
"voltage-gated calcium channel activity" evidence=ISS] [GO:0005516
"calmodulin binding" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005891 "voltage-gated calcium channel complex"
evidence=ISS] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=ISS] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=ISS]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 GO:GO:0014069 GO:GO:0046872 GO:GO:0005516
GO:GO:0007204 GO:GO:0005891 GO:GO:0005245 eggNOG:COG1226
InterPro:IPR014873 SMART:SM01062 HOVERGEN:HBG050763 Pfam:PF08763
PANTHER:PTHR10037:SF47 EMBL:X15539 EMBL:X55763 EMBL:X60782
EMBL:M57974 PIR:S05054 PIR:S11339 RefSeq:NP_001129994.1
UniGene:Ocu.1835 UniGene:Ocu.3254 PDB:4DEY PDBsum:4DEY
ProteinModelPortal:P15381 SMR:P15381 GeneID:100101555 CTD:100101555
BindingDB:P15381 ChEMBL:CHEMBL2830 Uniprot:P15381
Length = 2171
Score = 180 (68.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 189 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 248
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 249 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 308
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 309 IIIYAIIGLELFMGK 323
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 967 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 1026
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 1027 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1084
Score = 144 (55.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 133 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 192
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 193 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 235
>UNIPROTKB|F1LMN0 [details] [associations]
symbol:Cacna1c "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 RGD:2245 GO:GO:0005737 GO:GO:0014069 GO:GO:0007204
GO:GO:0005891 GO:GO:0005245 InterPro:IPR014873 SMART:SM01062
Pfam:PF08763 PANTHER:PTHR10037:SF47 GeneTree:ENSGT00680000099727
IPI:IPI00476992 Ensembl:ENSRNOT00000052017 ArrayExpress:F1LMN0
Uniprot:F1LMN0
Length = 2172
Score = 180 (68.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 191 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 250
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 251 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 310
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 311 IIIYAIIGLELFMGK 325
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 969 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 1028
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 1029 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1086
Score = 133 (51.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 39/105 (37%), Positives = 54/105 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILV-HPL-FSLFIITTILTNCI-LMIMPGTP---------TIE 66
AL L NPIRR I I + L F + I+ TI NC+ L I P +E
Sbjct: 133 ALLCLTLKNPIRRACISIGTWNALPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLE 192
Query: 67 STEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 193 RVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 237
Score = 77 (32.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
++ R FRV+R +K ++ G++T++ I+S + L V +L + ++A++G+Q
Sbjct: 1356 SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ 1412
>UNIPROTKB|E9PDJ0 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 GO:GO:0005891 GO:GO:0005245 EMBL:AC005342
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF47 EMBL:AC005293 EMBL:AC005344 EMBL:AC005414
EMBL:AC005866 EMBL:AC006051 EMBL:AC007618 IPI:IPI00853140
RefSeq:NP_001161096.1 UniGene:Hs.118262 GeneID:775 KEGG:hsa:775
CTD:775 HGNC:HGNC:1390 KO:K04850 ChiTaRS:CACNA1C GenomeRNAi:775
NextBio:3132 ProteinModelPortal:E9PDJ0 SMR:E9PDJ0 PRIDE:E9PDJ0
Ensembl:ENST00000399617 UCSC:uc001qkj.2 ArrayExpress:E9PDJ0
Bgee:E9PDJ0 Uniprot:E9PDJ0
Length = 2173
Score = 180 (68.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 937 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 996
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 997 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1054
Score = 144 (55.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
>RGD|68944 [details] [associations]
symbol:Cacna1i "calcium channel, voltage-dependent, T type, alpha
1I subunit" species:10116 "Rattus norvegicus" [GO:0005891
"voltage-gated calcium channel complex" evidence=IC] [GO:0008332
"low voltage-gated calcium channel activity" evidence=IDA]
[GO:0060402 "calcium ion transport into cytosol" evidence=IDA]
[GO:0070509 "calcium ion import" evidence=IDA] InterPro:IPR002077
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167
PRINTS:PR01629 EMBL:AF086827 RGD:68944 GO:GO:0060402 GO:GO:0005891
eggNOG:COG1226 GO:GO:0008332 HOVERGEN:HBG050764 CTD:8911 KO:K04856
EMBL:AF290214 IPI:IPI00758470 IPI:IPI00758472 RefSeq:NP_064469.3
UniGene:Rn.48680 ProteinModelPortal:Q9Z0Y8 PRIDE:Q9Z0Y8 GeneID:56827
KEGG:rno:56827 UCSC:RGD:68944 BindingDB:Q9Z0Y8 ChEMBL:CHEMBL5459
NextBio:611268 Genevestigator:Q9Z0Y8 Uniprot:Q9Z0Y8
Length = 2201
Score = 180 (68.4 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCIL--MIMPG------TPTIESTEVIFTGIYTF--- 78
R I ++ +P F + IL NC+ M P + + +V I+ F
Sbjct: 67 RNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMECLSDRCKILQVFDDFIFIFFAM 126
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN--LAALRTFRVLRALK 136
E +K++A G I YL D WN LDF ++ V +DL N L+A+RT RVLR LK
Sbjct: 127 EMVLKMVALG-IFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLK 185
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 186 AINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQ 227
Score = 166 (63.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-FIV-IALAYVTMGID-------LG 121
IFT I+ E +KV++ G YLR +WN LD F+V +++ + + + LG
Sbjct: 1169 IFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKILG 1228
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ PGLK +V +I S+K + +++++ +F ++G+Q +
Sbjct: 1229 VLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFK 1288
Query: 182 GK 183
GK
Sbjct: 1289 GK 1290
Score = 160 (61.4 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 36/117 (30%), Positives = 68/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E V+FT ++ E +K+ A G F YLR+ +N D I++ ++ + +G
Sbjct: 627 TNILEICNVVFTSMFALEMILKLAAFGL----FDYLRNPYNIFDSIIVIISIWEIVGQAD 682
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR+LR LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 683 GGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 739
Score = 153 (58.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE------- 69
++++ P N R + I+ H LF ++ I NCI + + P IE STE
Sbjct: 1108 SVYLFSPENKFRILCQTIIAHKLFDYVVLAFIFLNCITIALE-RPQIEAGSTERIFLTVS 1166
Query: 70 -VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-FIV-IALAYVTMGI-DLGNLAA 125
IFT I+ E +KV++ G YLR +WN LD F+V +++ + + + G
Sbjct: 1167 NYIFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSVASAGGAKI 1226
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGA--VIES-VKNLRDVIILTMFSLSVFALMGL 177
L RVLR L+T+ + + G V+E+ + +L+ + + + + F + G+
Sbjct: 1227 LGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGI 1281
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 42/168 (25%), Positives = 81/168 (48%)
Query: 36 ILVHPL-----FSLFIITTILTNCILMIMP--GTPTIESTEV-----IFTGIYTFESAVK 83
+L+H + +FI I N + M + PT T + +FT ++ E+ +K
Sbjct: 1437 LLIHSMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK 1496
Query: 84 VMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL----------RTFR 130
++A G L F +D WN LD ++ L+ MGI L + AAL R R
Sbjct: 1497 LVAFG--LRRF--FKDRWNQLDLAIVLLS--VMGITLEEIEINAALPINPTIIRIMRVLR 1550
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ R LK + + G++ ++ V++++ + ++ +L M ++A +G++
Sbjct: 1551 IARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE 1598
>UNIPROTKB|F5GY28 [details] [associations]
symbol:CACNA1C "Voltage-dependent L-type calcium channel
subunit alpha-1C" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005446 InterPro:IPR005451
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01630
PRINTS:PR01635 GO:GO:0005891 GO:GO:0005245 EMBL:AC005342
InterPro:IPR014873 SMART:SM01062 Pfam:PF08763
PANTHER:PTHR10037:SF47 EMBL:AC005293 EMBL:AC005344 EMBL:AC005414
EMBL:AC005866 EMBL:AC006051 EMBL:AC007618 IPI:IPI00827766
HGNC:HGNC:1390 ChiTaRS:CACNA1C ProteinModelPortal:F5GY28 SMR:F5GY28
Ensembl:ENST00000406454 ArrayExpress:F5GY28 Bgee:F5GY28
Uniprot:F5GY28
Length = 2209
Score = 180 (68.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 43/135 (31%), Positives = 78/135 (57%)
Query: 65 IESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID----- 119
+E E +F I+T E+ +KV+A G + YLR+ WN LDFI++ + + ++
Sbjct: 159 LERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKA 218
Query: 120 -----LG------NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFS 168
LG ++ ALR FRVLR L+ V+ VP L+ ++ ++I+++ L + +L +F
Sbjct: 219 DGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFV 278
Query: 169 LSVFALMGLQDSRGK 183
+ ++A++GL+ GK
Sbjct: 279 IIIYAIIGLELFMGK 293
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 37/118 (31%), Positives = 71/118 (60%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGID---LGNLAA 125
+++FT I+T E A+K+ A G L ++ R+ +N LD +V++++ ++ GI + +
Sbjct: 937 DIVFTTIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKI 996
Query: 126 LRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGK 183
LR RVLR L+ + GLK +V V +++ + +++I+T +FA +G+Q +GK
Sbjct: 997 LRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGK 1054
Score = 144 (55.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCI-LMIMPGTP---------TIEST 68
AL L NPIRR I I+ F + I+ TI NC+ L I P +E
Sbjct: 103 ALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERV 162
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIAL 111
E +F I+T E+ +KV+A G + YLR+ WN LDFI++ +
Sbjct: 163 EYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVV 205
>UNIPROTKB|Q9P0X4 [details] [associations]
symbol:CACNA1I "Voltage-dependent T-type calcium channel
subunit alpha-1I" species:9606 "Homo sapiens" [GO:0008332 "low
voltage-gated calcium channel activity" evidence=NAS] [GO:0006816
"calcium ion transport" evidence=NAS] [GO:0005891 "voltage-gated
calcium channel complex" evidence=NAS] [GO:0005245 "voltage-gated
calcium channel activity" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0006810 "transport" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002077 InterPro:IPR005445
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01629
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0007165 EMBL:AL022312
GO:GO:0005891 eggNOG:COG1226 GO:GO:0008332 DrugBank:DB00661
HOVERGEN:HBG050764 DrugBank:DB04841 EMBL:AF129133 EMBL:AF142567
EMBL:AF211189 EMBL:AF393329 EMBL:AL008716 EMBL:AL022319
EMBL:AB032946 IPI:IPI00152899 IPI:IPI00217484 IPI:IPI00412316
IPI:IPI00938135 RefSeq:NP_001003406.1 RefSeq:NP_066919.2
UniGene:Hs.125116 ProteinModelPortal:Q9P0X4 SMR:Q9P0X4
IntAct:Q9P0X4 STRING:Q9P0X4 TCDB:1.A.1.11.7 PhosphoSite:Q9P0X4
DMDM:23396521 PaxDb:Q9P0X4 PRIDE:Q9P0X4 Ensembl:ENST00000401624
Ensembl:ENST00000402142 Ensembl:ENST00000404898
Ensembl:ENST00000407673 GeneID:8911 KEGG:hsa:8911 UCSC:uc003ayc.3
UCSC:uc003ayd.3 UCSC:uc003aye.3 UCSC:uc003ayf.3 CTD:8911
GeneCards:GC22P039966 HGNC:HGNC:1396 MIM:608230 neXtProt:NX_Q9P0X4
PharmGKB:PA26011 KO:K04856 OrthoDB:EOG4F4S97 BindingDB:Q9P0X4
ChEMBL:CHEMBL5558 ChiTaRS:CACNA1I DrugBank:DB00617 GenomeRNAi:8911
NextBio:33488 ArrayExpress:Q9P0X4 Bgee:Q9P0X4 Genevestigator:Q9P0X4
Uniprot:Q9P0X4
Length = 2223
Score = 180 (68.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 50/162 (30%), Positives = 83/162 (51%)
Query: 30 RRVAIYILVHPLFSLFIITTILTNCIL--MIMPG------TPTIESTEVIFTGIYTF--- 78
R I ++ +P F + IL NC+ M P + + +V I+ F
Sbjct: 69 RNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMDCLSDRCKILQVFDDFIFIFFAM 128
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGN--LAALRTFRVLRALK 136
E +K++A G I YL D WN LDF ++ V +DL N L+A+RT RVLR LK
Sbjct: 129 EMVLKMVALG-IFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLK 187
Query: 137 TVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 188 AINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQ 229
Score = 167 (63.8 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLD-F--------IVIALAYVTMGIDLG 121
IFT I+ E +KV++ G YLR +WN LD F IV++LA LG
Sbjct: 1210 IFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSLASAGGAKILG 1269
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ PGLK +V +I S+K + +++++ +F ++G+Q +
Sbjct: 1270 VLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFK 1329
Query: 182 GK 183
GK
Sbjct: 1330 GK 1331
Score = 165 (63.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 49/171 (28%), Positives = 89/171 (52%)
Query: 16 ATDALWVL-DPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIM-----PG--TPTIES 67
A A+W+ D + R I+ F+ I+ IL N + M + P T +E
Sbjct: 615 ADGAVWLCGDVWRETRAKLRGIVDSKYFNRGIMMAILVNTVSMGIEHHEQPEELTNILEI 674
Query: 68 TEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDLGNLAAL 126
V+FT ++ E +K+ A G F YLR+ +N D I++ ++ + +G G L+ L
Sbjct: 675 CNVVFTSMFALEMILKLAAFGL----FDYLRNPYNIFDSIIVIISIWEIVGQADGGLSVL 730
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
RTFR+LR LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 731 RTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 781
Score = 153 (58.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 45/175 (25%), Positives = 84/175 (48%)
Query: 19 ALWVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE------- 69
++++ P N R + I+ H LF ++ I NCI + + P IE STE
Sbjct: 1149 SVYLFSPENRFRVLCQTIIAHKLFDYVVLAFIFLNCITIALE-RPQIEAGSTERIFLTVS 1207
Query: 70 -VIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLAALRT 128
IFT I+ E +KV++ G YLR +WN LD ++ ++ + + + L + +
Sbjct: 1208 NYIFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWNVLDGFLVFVSIIDIVVSLASAGGAKI 1267
Query: 129 FRVLRALKTVAIVPGLKTIVGA-----VIES-VKNLRDVIILTMFSLSVFALMGL 177
VLR L+ + + L+ I A V+E+ + +L+ + + + + F + G+
Sbjct: 1268 LGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGI 1322
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 42/168 (25%), Positives = 81/168 (48%)
Query: 36 ILVHPL-----FSLFIITTILTNCILMIMP--GTPTIESTEV-----IFTGIYTFESAVK 83
+L+H + +FI I N + M + PT T + +FT ++ E+ +K
Sbjct: 1478 LLIHSMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK 1537
Query: 84 VMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL----------RTFR 130
++A G L F +D WN LD ++ L+ MGI L + AAL R R
Sbjct: 1538 LVAFG--LRRF--FKDRWNQLDLAIVLLS--VMGITLEEIEINAALPINPTIIRIMRVLR 1591
Query: 131 VLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
+ R LK + + G++ ++ V++++ + ++ +L M ++A +G++
Sbjct: 1592 IARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVE 1639
>UNIPROTKB|E2QSU0 [details] [associations]
symbol:CACNA1G "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005891 "voltage-gated calcium channel
complex" evidence=IEA] [GO:0005245 "voltage-gated calcium channel
activity" evidence=IEA] InterPro:IPR005445 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR01629 GO:GO:0005891 GO:GO:0005245
Ensembl:ENSCAFT00000027129 Uniprot:E2QSU0
Length = 2174
Score = 166 (63.5 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISIIDILVSMVSDSGTKILG 1352
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1412
Query: 182 GK 183
GK
Sbjct: 1413 GK 1414
Score = 166 (63.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1234 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1292
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1293 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISIIDILVSMVSDSGTKILG 1352
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1353 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1405
Score = 132 (51.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 48/184 (26%), Positives = 88/184 (47%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG--TPTI--ESTEV---IFTGIYTF 78
++ R + ++ LFI I N + M M P I E+ ++ IFT I+
Sbjct: 1563 YSRFRLLVHHLCTSHYLDLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVL 1622
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL--------- 126
ES K++A GF + +D WN LD ++ L+ MGI L + A+L
Sbjct: 1623 ESVFKLVAFGFR----RFFQDRWNQLDLAIVLLSI--MGITLEEIEVNASLPINPTIIRI 1676
Query: 127 -RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
R R+ R LK + + G++ ++ V++++ + ++ +L M +FA +G++ +
Sbjct: 1677 MRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLEC 1736
Query: 186 DESH 189
DE+H
Sbjct: 1737 DETH 1740
Score = 43 (20.2 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>UNIPROTKB|F1M9P3 [details] [associations]
symbol:Cacna1g "Voltage-dependent T-type calcium channel
subunit alpha-1G" species:10116 "Rattus norvegicus" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR005445 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01629
RGD:68942 GO:GO:0005891 GO:GO:0005245 IPI:IPI00777235
Ensembl:ENSRNOT00000055596 ArrayExpress:F1M9P3 Uniprot:F1M9P3
Length = 2175
Score = 166 (63.5 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1295 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1354
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1355 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1414
Query: 182 GK 183
GK
Sbjct: 1415 GK 1416
Score = 166 (63.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 773 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 828
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 829 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 885
Score = 147 (56.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1236 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1294
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1295 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1354
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1355 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1407
Score = 138 (53.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 49/184 (26%), Positives = 89/184 (48%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG--TPTI--ESTEV---IFTGIYTF 78
++ R + ++ LFI I N + M M P I E+ ++ IFT I+ F
Sbjct: 1565 YSRFRLLVHHLCTSHYLDLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVF 1624
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL--------- 126
ES K++A GF + +D WN LD ++ L+ MGI L + A+L
Sbjct: 1625 ESVFKLVAFGFR----RFFQDRWNQLDLAIVLLSI--MGITLEEIEVNASLPINPTIIRI 1678
Query: 127 -RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
R R+ R LK + + G++ ++ V++++ + ++ +L M +FA +G++ +
Sbjct: 1679 MRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLEC 1738
Query: 186 DESH 189
DE+H
Sbjct: 1739 DETH 1742
Score = 43 (20.2 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
>UNIPROTKB|Q19R00 [details] [associations]
symbol:CACNA1G "Voltage-dependent T-type calcium channel
subunit alpha-1G" species:9606 "Homo sapiens" [GO:0005245
"voltage-gated calcium channel activity" evidence=IEA] [GO:0005891
"voltage-gated calcium channel complex" evidence=IEA]
InterPro:IPR002077 InterPro:IPR005445 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR00167 PRINTS:PR01629 GO:GO:0005891
GO:GO:0005245 RefSeq:NP_001243263.1 UniGene:Hs.591169 GeneID:8913
KEGG:hsa:8913 CTD:8913 HGNC:HGNC:1394 HOVERGEN:HBG050764 KO:K04854
ChiTaRS:CACNA1G GenomeRNAi:8913 HOGENOM:HOG000007742 EMBL:AC004590
EMBL:AC021491 EMBL:DQ494467 IPI:IPI00966975 STRING:Q19R00
Ensembl:ENST00000507896 UCSC:uc002iry.1 Uniprot:Q19R00
Length = 2194
Score = 166 (63.5 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 39/122 (31%), Positives = 68/122 (55%)
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGID-----LG 121
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D LG
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 122 NLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSR 181
L LR R LR L+ ++ GLK +V ++ S+K + +++++ +F ++G+Q +
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFK 1435
Query: 182 GK 183
GK
Sbjct: 1436 GK 1437
Score = 166 (63.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 69 EVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNLA--AL 126
+ IF + E VK++A G I YL D WN LDF ++ + +DL N++ A+
Sbjct: 122 DFIFA-FFAVEMVVKMVALG-IFGKKCYLGDTWNRLDFFIVIAGMLEYSLDLQNVSFSAV 179
Query: 127 RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQ 178
RT RVLR L+ + VP ++ +V +++++ L +V++L F +F ++G+Q
Sbjct: 180 RTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQ 231
Score = 154 (59.3 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 30/117 (25%), Positives = 69/117 (58%)
Query: 62 TPTIESTEVIFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALA-YVTMGIDL 120
T +E + ++FT ++ E +K++ G F Y+++ +N D +++ ++ + +G
Sbjct: 772 TNALEISNIVFTSLFALEMLLKLLVYG----PFGYIKNPYNIFDGVIVVISVWEIVGQQG 827
Query: 121 GNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
G L+ LRTFR++R LK V +P L+ + +++++ N+ +L M + +F+++G+
Sbjct: 828 GGLSVLRTFRLMRVLKLVRFLPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGM 884
Score = 147 (56.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/173 (26%), Positives = 82/173 (47%)
Query: 21 WVLDPFNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPGTPTIE--STE--------V 70
++ P + R + I+ H +F ++ I NCI + M P I+ S E
Sbjct: 1257 YIFPPQSRFRLLCHRIITHKMFDHVVLVIIFLNCITIAME-RPKIDPHSAERIFLTLSNY 1315
Query: 71 IFTGIYTFESAVKVMARGFILESFTYLRDAWNWLDFIVIALAY----VTMGIDLGN--LA 124
IFT ++ E VKV+A G+ YLR +WN LD +++ ++ V+M D G L
Sbjct: 1316 IFTAVFLAEMTVKVVALGWCFGEQAYLRSSWNVLDGLLVLISVIDILVSMVSDSGTKILG 1375
Query: 125 ALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL 177
LR R+LR L+ + ++ + + V + +L+ + + + + F + G+
Sbjct: 1376 MLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLKPIGNIVVICCAFFIIFGI 1428
Score = 132 (51.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 48/184 (26%), Positives = 88/184 (47%)
Query: 26 FNPIRRVAIYILVHPLFSLFIITTILTNCILMIMPG--TPTI--ESTEV---IFTGIYTF 78
++ R + ++ LFI I N + M M P I E+ ++ IFT I+
Sbjct: 1586 YSRFRLLVHHLCTSHYLDLFITGVIGLNVVTMAMEHYQQPQILDEALKICNYIFTVIFVL 1645
Query: 79 ESAVKVMARGFILESFTYLRDAWNWLDFIVIALAYVTMGIDLGNL---AAL--------- 126
ES K++A GF + +D WN LD ++ L+ MGI L + A+L
Sbjct: 1646 ESVFKLVAFGFR----RFFQDRWNQLDLAIVLLSI--MGITLEEIEVNASLPINPTIIRI 1699
Query: 127 -RTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQDSRGKKS 185
R R+ R LK + + G++ ++ V++++ + ++ +L M +FA +G++ +
Sbjct: 1700 MRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVELFGDLEC 1759
Query: 186 DESH 189
DE+H
Sbjct: 1760 DETH 1763
Score = 43 (20.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 FSATDALWVLDPFNPIRRV-AIYILVHPLF-SLFIITTILTNCILM 57
FSA + VL P I RV ++ ILV L +L ++ +L C +
Sbjct: 176 FSAVRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV 221
WARNING: HSPs involving 133 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.142 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 191 191 0.00094 110 3 11 22 0.48 31
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 383
No. of states in DFA: 578 (61 KB)
Total size of DFA: 141 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.30u 0.12s 17.42t Elapsed: 00:00:01
Total cpu time: 17.40u 0.12s 17.52t Elapsed: 00:00:01
Start: Thu Aug 15 12:07:55 2013 End: Thu Aug 15 12:07:56 2013
WARNINGS ISSUED: 2