Query psy14956
Match_columns 147
No_of_seqs 135 out of 200
Neff 4.2
Searched_HMMs 13730
Date Fri Aug 16 16:47:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14956.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14956hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2mysa2 c.37.1.9 (A:4-33,A:80- 66.4 2 0.00015 37.7 3.7 19 54-72 761-779 (794)
2 d1kk8a2 c.37.1.9 (A:1-28,A:77- 63.6 2.6 0.00019 36.9 3.9 17 56-72 759-775 (789)
3 d1w7ja2 c.37.1.9 (A:63-792) My 62.6 2.8 0.0002 36.2 3.8 29 44-72 693-724 (730)
4 d1kk8a2 c.37.1.9 (A:1-28,A:77- 59.9 3.4 0.00025 36.1 4.0 20 53-72 730-749 (789)
5 d2mysa2 c.37.1.9 (A:4-33,A:80- 44.1 8.8 0.00064 33.5 4.0 19 54-72 735-753 (794)
6 d1sp1a_ g.37.1.1 (A:) Transcri 23.4 5.7 0.00041 21.0 -0.7 10 135-144 3-12 (29)
7 d1x6ea2 g.37.1.1 (A:41-66) Zin 23.2 3.9 0.00028 21.5 -1.3 9 135-143 3-11 (26)
8 d1y02a2 g.50.1.1 (A:20-70) Rif 20.6 7.9 0.00058 22.7 -0.5 19 125-143 7-25 (51)
9 d2csha2 g.37.1.1 (A:61-104) Zi 19.3 5.6 0.00041 23.4 -1.3 10 134-143 5-14 (44)
10 d1a1ia2 g.37.1.1 (A:132-159) Z 18.6 6.9 0.0005 20.5 -1.0 9 135-143 4-12 (28)
No 1
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=66.37 E-value=2 Score=37.70 Aligned_cols=19 Identities=16% Similarity=-0.001 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q psy14956 54 EYCARLIQHAWRKHKQCRA 72 (147)
Q Consensus 54 e~AA~vIQRA~R~~~l~r~ 72 (147)
..||.+||+.||.|+.+|.
T Consensus 761 r~a~~~IQ~~~R~~~~~r~ 779 (794)
T d2mysa2 761 RESIFCIQYNVRSFMNVKH 779 (794)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3466677777777765543
No 2
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=63.61 E-value=2.6 Score=36.92 Aligned_cols=17 Identities=29% Similarity=0.198 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHhhc
Q psy14956 56 CARLIQHAWRKHKQCRA 72 (147)
Q Consensus 56 AA~vIQRA~R~~~l~r~ 72 (147)
|+.+|||.||.|+.+|.
T Consensus 759 ai~~iQ~~~R~~~~rr~ 775 (789)
T d1kk8a2 759 GLSVIQRNIRKWLVLRN 775 (789)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 55566666666665543
No 3
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=62.56 E-value=2.8 Score=36.20 Aligned_cols=29 Identities=17% Similarity=-0.002 Sum_probs=20.3
Q ss_pred chhhHHHHH---HHHHHHHHHHHHHHHHHhhc
Q psy14956 44 VSSTLWRQR---EEYCARLIQHAWRKHKQCRA 72 (147)
Q Consensus 44 IsTTl~rkr---Ee~AA~vIQRA~R~~~l~r~ 72 (147)
....|+++| -..+|..||++||.|+.||.
T Consensus 693 ~~~~LE~~r~~~l~~~~~~iQ~~~R~~l~Rk~ 724 (730)
T d1w7ja2 693 QVAYLEKIRADKLRAACIRIQKTIRGWLMRKK 724 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333455443 34478999999999998764
No 4
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=59.92 E-value=3.4 Score=36.14 Aligned_cols=20 Identities=15% Similarity=-0.054 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q psy14956 53 EEYCARLIQHAWRKHKQCRA 72 (147)
Q Consensus 53 Ee~AA~vIQRA~R~~~l~r~ 72 (147)
-..+|.+||++||.|+.|+.
T Consensus 730 l~~~~~~IQ~~~R~~~~Rk~ 749 (789)
T d1kk8a2 730 LSKIISMFQAHIRGYLIRKA 749 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45589999999999998764
No 5
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=44.07 E-value=8.8 Score=33.45 Aligned_cols=19 Identities=11% Similarity=-0.174 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q psy14956 54 EYCARLIQHAWRKHKQCRA 72 (147)
Q Consensus 54 e~AA~vIQRA~R~~~l~r~ 72 (147)
..+|+.||++||.|+.|+.
T Consensus 735 ~~~~~~IQ~~~Rg~l~Rk~ 753 (794)
T d2mysa2 735 AEIITATQARCRGFLMRVE 753 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4578899999999987654
No 6
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.36 E-value=5.7 Score=20.99 Aligned_cols=10 Identities=30% Similarity=0.683 Sum_probs=8.3
Q ss_pred HHhHhhcCCc
Q psy14956 135 YLCLLCGKNR 144 (147)
Q Consensus 135 ~~~~~~~~~~ 144 (147)
|.|..|||.-
T Consensus 3 y~C~~C~k~F 12 (29)
T d1sp1a_ 3 FACPECPKRF 12 (29)
T ss_dssp SCCTTTTCCC
T ss_pred EECCcCCCee
Confidence 7899999863
No 7
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.18 E-value=3.9 Score=21.48 Aligned_cols=9 Identities=67% Similarity=1.457 Sum_probs=7.8
Q ss_pred HHhHhhcCC
Q psy14956 135 YLCLLCGKN 143 (147)
Q Consensus 135 ~~~~~~~~~ 143 (147)
|.|..|||.
T Consensus 3 y~C~eCgK~ 11 (26)
T d1x6ea2 3 YKCLECGKA 11 (26)
T ss_dssp EECSSSCCE
T ss_pred ccCCCCcCe
Confidence 789999985
No 8
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.56 E-value=7.9 Score=22.70 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=16.2
Q ss_pred cccCCcchHHHHhHhhcCC
Q psy14956 125 FKDFSMGKWAYLCLLCGKN 143 (147)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~ 143 (147)
.+.|++.++.+.|..||+.
T Consensus 7 ~~~F~~~~rkhhCr~CG~~ 25 (51)
T d1y02a2 7 GAHFANTARKQTCLDCKKN 25 (51)
T ss_dssp CCCCSSGGGCEECTTTCCE
T ss_pred CCcccCCccCcccccCCcc
Confidence 4679999999999999973
No 9
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.29 E-value=5.6 Score=23.36 Aligned_cols=10 Identities=40% Similarity=1.069 Sum_probs=8.4
Q ss_pred HHHhHhhcCC
Q psy14956 134 AYLCLLCGKN 143 (147)
Q Consensus 134 ~~~~~~~~~~ 143 (147)
.|.|.+|||.
T Consensus 5 PYeC~~C~Kr 14 (44)
T d2csha2 5 PYECNICAKR 14 (44)
T ss_dssp CEECSSSCCE
T ss_pred ceeccchhhh
Confidence 4889999984
No 10
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.63 E-value=6.9 Score=20.53 Aligned_cols=9 Identities=33% Similarity=1.113 Sum_probs=7.8
Q ss_pred HHhHhhcCC
Q psy14956 135 YLCLLCGKN 143 (147)
Q Consensus 135 ~~~~~~~~~ 143 (147)
|.|..|||.
T Consensus 4 y~C~~C~k~ 12 (28)
T d1a1ia2 4 FQCRICMRN 12 (28)
T ss_dssp EECTTTCCE
T ss_pred ccCCCCcCE
Confidence 789999985
Done!