Your job contains 1 sequence.
>psy14956
MFCVDILDALTKDFFARKGNPIEETGDLVAEVNTRPDEAGYDPVSSTLWRQREEYCARLI
QHAWRKHKQCRAGGTEPGSPGSPDGRDTAVLVESDGFSIKNGHRVVIHSRSPSQTSRSAE
CLFSFKDFSMGKWAYLCLLCGKNRETS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14956
(147 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0264255 - symbol:para "paralytic" species:7227 "Dr... 341 2.7e-29 1
UNIPROTKB|Q8AV15 - symbol:Q8AV15 "Uncharacterized protein... 115 4.8e-06 1
UNIPROTKB|F1RSK2 - symbol:SCN4A "Uncharacterized protein"... 117 1.5e-05 1
UNIPROTKB|E1B9X0 - symbol:LOC517426 "Uncharacterized prot... 117 1.5e-05 1
UNIPROTKB|E2RR09 - symbol:SCN4A "Uncharacterized protein"... 117 1.5e-05 1
UNIPROTKB|G3MYM1 - symbol:SCN10A "Uncharacterized protein... 117 1.6e-05 1
UNIPROTKB|E1C6G0 - symbol:E1C6G0 "Uncharacterized protein... 115 2.4e-05 1
RGD|3636 - symbol:Scn4a "sodium channel, voltage-gated, t... 115 2.4e-05 1
UNIPROTKB|P15390 - symbol:Scn4a "Sodium channel protein t... 115 2.4e-05 1
MGI|MGI:98250 - symbol:Scn4a "sodium channel, voltage-gat... 115 2.4e-05 1
UNIPROTKB|J3QQZ1 - symbol:SCN4A "Sodium channel protein t... 114 3.1e-05 1
UNIPROTKB|P35499 - symbol:SCN4A "Sodium channel protein t... 114 3.1e-05 1
UNIPROTKB|F1SJS7 - symbol:SCN10A "Uncharacterized protein... 110 8.8e-05 1
>FB|FBgn0264255 [details] [associations]
symbol:para "paralytic" species:7227 "Drosophila
melanogaster" [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007638 "mechanosensory behavior" evidence=IMP] [GO:0009612
"response to mechanical stimulus" evidence=IGI;IMP] [GO:0006814
"sodium ion transport" evidence=NAS;IDA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=ISS;NAS;IDA] [GO:0005887
"integral to plasma membrane" evidence=NAS;IDA] [GO:0046684
"response to pyrethroid" evidence=NAS;IMP] [GO:0046680 "response to
DDT" evidence=IDA;NAS;IMP] [GO:0045433 "male courtship behavior,
veined wing generated song production" evidence=NAS;IMP]
[GO:0001518 "voltage-gated sodium channel complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0001666 "response to hypoxia" evidence=IDA] InterPro:IPR001696
InterPro:IPR002048 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PROSITE:PS50222
GO:GO:0005887 GO:GO:0007268 EMBL:AE014298 GO:GO:0001666
GO:GO:0005248 GO:GO:0045433 eggNOG:COG1226 GO:GO:0046680
GO:GO:0046684 GO:GO:0007638 ChiTaRS:Prm GO:GO:0001518
InterPro:IPR024583 Pfam:PF11933 GeneTree:ENSGT00650000092939
EMBL:U26713 EMBL:U26714 EMBL:U26715 EMBL:U26716 EMBL:U26717
EMBL:M32078 EMBL:AB008113 EMBL:AB035812 PIR:A30302 PIR:A33299
RefSeq:NP_001036280.1 RefSeq:NP_001036281.1 RefSeq:NP_001188616.1
RefSeq:NP_523371.2 ProteinModelPortal:P35500 SMR:P35500
IntAct:P35500 STRING:P35500 PaxDb:P35500 EnsemblMetazoa:FBtr0074298
GeneID:32619 KEGG:dme:Dmel_CG9907 UCSC:CG9907-RA CTD:32619
FlyBase:FBgn0260993 InParanoid:P35500 KO:K05388 OrthoDB:EOG4FJ6QK
GenomeRNAi:32619 NextBio:779491 Bgee:P35500 GermOnline:CG9907
Uniprot:P35500
Length = 2131
Score = 341 (125.1 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 68/102 (66%), Positives = 75/102 (73%)
Query: 1 MFCVDILDALTKDFFARKGNPIEETGDLVAEVNTRPDEAGYDPVSSTLWRQREEYCARLI 60
M+CVDILDALTKDFFARKGNPIEETG+ + E+ RPD GY+PVSSTLWRQREEYCARLI
Sbjct: 1936 MYCVDILDALTKDFFARKGNPIEETGE-IGEIAARPDTEGYEPVSSTLWRQREEYCARLI 1994
Query: 61 QHAWRKHKQCRAGG------TEPGSPGSPDGRDTAVLVESDG 96
QHAWRKHK GG T+ G G PD D A +DG
Sbjct: 1995 QHAWRKHKARGEGGGSFEPDTDHGDGGDPDAGDPAPDEATDG 2036
Score = 169 (64.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 36/50 (72%), Positives = 40/50 (80%)
Query: 72 AGGTEPGSPGSPD-GRDTAVLVESDGFSIKNGHRVVIHSRSPSQTSRSAE 120
AG T GSPG+ GR TAVLVESDGF KNGH+VVIHSRSPS TSR+A+
Sbjct: 2081 AGTTTAGSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTAD 2130
>UNIPROTKB|Q8AV15 [details] [associations]
symbol:Q8AV15 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 Pfam:PF00520 Pfam:PF00612 PRINTS:PR00170
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 EMBL:AADN02056683
EMBL:AADN02056684 EMBL:AADN02056685 EMBL:AB066568 IPI:IPI00575957
Ensembl:ENSGALT00000000331 HOGENOM:HOG000067880 HOVERGEN:HBG103650
Uniprot:Q8AV15
Length = 487
Score = 115 (45.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE--VNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G ++ D + E + P + Y+P+++TL R+ EE CA I
Sbjct: 337 CLDILFALTKEVLGDSGE-MDALKDTMEEKFMAANPSKVSYEPITTTLKRKHEEVCATKI 395
Query: 61 QHAWRKH 67
Q A+R++
Sbjct: 396 QRAFRRY 402
>UNIPROTKB|F1RSK2 [details] [associations]
symbol:SCN4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 OMA:NACESEN
EMBL:CU466386 Ensembl:ENSSSCT00000018814 Uniprot:F1RSK2
Length = 1832
Score = 117 (46.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 3 CVDILDALTKDFFARKG--NPIEETGDLVAEVNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G + ++ET + + P + Y+P+++TL R+ EE CA I
Sbjct: 1669 CLDILFALTKEVLGDSGEMDALKETME-EKFMAANPSKVSYEPITTTLKRKHEEVCAIKI 1727
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1728 QRAYRRH 1734
>UNIPROTKB|E1B9X0 [details] [associations]
symbol:LOC517426 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0001518 GeneTree:ENSGT00560000076721 EMBL:DAAA02049330
IPI:IPI00700698 Ensembl:ENSBTAT00000006265 OMA:NACESEN
Uniprot:E1B9X0
Length = 1834
Score = 117 (46.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 3 CVDILDALTKDFFARKG--NPIEETGDLVAEVNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G + ++ET + + P + Y+P+++TL R+ EE CA I
Sbjct: 1673 CLDILFALTKEVLGDSGEMDALKETME-EKFMAANPSKVSYEPITTTLKRKHEEVCAIKI 1731
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1732 QRAYRRH 1738
>UNIPROTKB|E2RR09 [details] [associations]
symbol:SCN4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005248 "voltage-gated sodium channel
activity" evidence=IEA] [GO:0001518 "voltage-gated sodium channel
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 GO:GO:0035725 GO:GO:0005248 KO:K04837
GO:GO:0001518 GeneTree:ENSGT00560000076721 CTD:6329 OMA:IIRRGAI
EMBL:AAEX03006360 EMBL:AAEX03006359 RefSeq:XP_853396.1
Ensembl:ENSCAFT00000019738 GeneID:610754 KEGG:cfa:610754
Uniprot:E2RR09
Length = 1837
Score = 117 (46.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 3 CVDILDALTKDFFARKG--NPIEETGDLVAEVNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G + ++ET + + P + Y+P+++TL R+ EE CA I
Sbjct: 1676 CLDILFALTKEVLGDSGEMDALKETME-EKFMAANPSKVSYEPITTTLKRKHEEVCAIKI 1734
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1735 QRAYRRH 1741
>UNIPROTKB|G3MYM1 [details] [associations]
symbol:SCN10A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0086069 "bundle of His cell to Purkinje myocyte
communication" evidence=IEA] [GO:0086067 "AV node cell to bundle of
His cell communication" evidence=IEA] [GO:0060371 "regulation of
atrial cardiac muscle cell membrane depolarization" evidence=IEA]
[GO:0055117 "regulation of cardiac muscle contraction"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0002027 "regulation of heart rate" evidence=IEA]
[GO:0001518 "voltage-gated sodium channel complex" evidence=IEA]
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 GO:GO:0035725
GO:GO:0005248 GO:GO:0044299 GO:GO:0001518
GeneTree:ENSGT00650000092939 OMA:CCPTWVK EMBL:DAAA02053656
Ensembl:ENSBTAT00000065485 Uniprot:G3MYM1
Length = 1964
Score = 117 (46.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE-VNTRPDEAGYDPVSSTL-WRQREEYCARLI 60
C+DIL A TK G ++ + + T +A Y+P+++TL W+Q E+ A +I
Sbjct: 1807 CLDILFAFTKKVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQ-EDISATVI 1865
Query: 61 QHAWRKHKQCRAGGTEPGSPGSPDGRDTAVLVESDGFSI 99
Q A+R + Q R+ T G+P + A L E +GF++
Sbjct: 1866 QKAYRSYMQHRSR-TAASPAGAPRAEEEAALPE-EGFAV 1902
>UNIPROTKB|E1C6G0 [details] [associations]
symbol:E1C6G0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 GO:GO:0001518 GeneTree:ENSGT00560000076721
EMBL:AADN02056683 EMBL:AADN02056684 EMBL:AADN02056685
IPI:IPI00820559 Ensembl:ENSGALT00000040680 OMA:LNIEATE
ArrayExpress:E1C6G0 Uniprot:E1C6G0
Length = 1817
Score = 115 (45.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE--VNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G ++ D + E + P + Y+P+++TL R+ EE CA I
Sbjct: 1675 CLDILFALTKEVLGDSGE-MDALKDTMEEKFMAANPSKVSYEPITTTLKRKHEEVCATKI 1733
Query: 61 QHAWRKH 67
Q A+R++
Sbjct: 1734 QRAFRRY 1740
>RGD|3636 [details] [associations]
symbol:Scn4a "sodium channel, voltage-gated, type IV, alpha
subunit" species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated
sodium channel complex" evidence=IEA] [GO:0005248 "voltage-gated
sodium channel activity" evidence=IEA;ISO;TAS] [GO:0006814 "sodium
ion transport" evidence=ISO;TAS] [GO:0034765 "regulation of ion
transmembrane transport" evidence=ISO] [GO:0035725 "sodium ion
transmembrane transport" evidence=ISO] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008052
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015 RGD:3636 GO:GO:0005248
eggNOG:COG1226 HOGENOM:HOG000231755 KO:K04837 GO:GO:0001518
HOVERGEN:HBG053100 CTD:6329 OrthoDB:EOG4B2SW8 EMBL:M26643 EMBL:Y17153
IPI:IPI00339065 PIR:JN0007 RefSeq:NP_037310.1 UniGene:Rn.9700
ProteinModelPortal:P15390 STRING:P15390 PRIDE:P15390 GeneID:25722
KEGG:rno:25722 UCSC:RGD:3636 InParanoid:O70611 BindingDB:P15390
ChEMBL:CHEMBL3509 NextBio:607821 ArrayExpress:P15390
Genevestigator:P15390 GermOnline:ENSRNOG00000012134 Uniprot:P15390
Length = 1840
Score = 115 (45.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE--VNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G ++ + E + P + Y+P+++TL R++EE CA I
Sbjct: 1669 CLDILFALTKEVLGDSGE-MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKI 1727
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1728 QRAYRRH 1734
>UNIPROTKB|P15390 [details] [associations]
symbol:Scn4a "Sodium channel protein type 4 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008052
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015 RGD:3636 GO:GO:0005248
eggNOG:COG1226 HOGENOM:HOG000231755 KO:K04837 GO:GO:0001518
HOVERGEN:HBG053100 CTD:6329 OrthoDB:EOG4B2SW8 EMBL:M26643
EMBL:Y17153 IPI:IPI00339065 PIR:JN0007 RefSeq:NP_037310.1
UniGene:Rn.9700 ProteinModelPortal:P15390 STRING:P15390
PRIDE:P15390 GeneID:25722 KEGG:rno:25722 UCSC:RGD:3636
InParanoid:O70611 BindingDB:P15390 ChEMBL:CHEMBL3509 NextBio:607821
ArrayExpress:P15390 Genevestigator:P15390
GermOnline:ENSRNOG00000012134 Uniprot:P15390
Length = 1840
Score = 115 (45.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE--VNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G ++ + E + P + Y+P+++TL R++EE CA I
Sbjct: 1669 CLDILFALTKEVLGDSGE-MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKI 1727
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1728 QRAYRRH 1734
>MGI|MGI:98250 [details] [associations]
symbol:Scn4a "sodium channel, voltage-gated, type IV, alpha"
species:10090 "Mus musculus" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IC] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005244 "voltage-gated ion channel activity"
evidence=IEA] [GO:0005248 "voltage-gated sodium channel activity"
evidence=IDA] [GO:0005267 "potassium channel activity"
evidence=IEA] [GO:0005272 "sodium channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0034765 "regulation of ion transmembrane
transport" evidence=IDA] [GO:0035725 "sodium ion transmembrane
transport" evidence=IEA;IDA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0071805 "potassium ion transmembrane transport"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR008052 InterPro:IPR010526
Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170 PRINTS:PR01665
PROSITE:PS50096 SMART:SM00015 MGI:MGI:98250 GO:GO:0005248
eggNOG:COG1226 EMBL:AL604045 HOGENOM:HOG000231755 KO:K04837
GO:GO:0001518 CTD:6329 EMBL:AJ278787 EMBL:BC129805 IPI:IPI00318790
RefSeq:NP_573462.2 UniGene:Mm.432528 HSSP:P04775
ProteinModelPortal:Q9ER60 SMR:Q9ER60 STRING:Q9ER60
PhosphoSite:Q9ER60 PaxDb:Q9ER60 PRIDE:Q9ER60 GeneID:110880
KEGG:mmu:110880 UCSC:uc007lyu.1 InParanoid:B1ARK0 NextBio:364857
Genevestigator:Q9ER60 Uniprot:Q9ER60
Length = 1841
Score = 115 (45.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE--VNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G ++ + E + P + Y+P+++TL R++EE CA I
Sbjct: 1670 CLDILFALTKEVLGDSGE-MDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKI 1728
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1729 QRAYRRH 1735
>UNIPROTKB|J3QQZ1 [details] [associations]
symbol:SCN4A "Sodium channel protein type 4 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001696 InterPro:IPR005821 InterPro:IPR008052
InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512 PRINTS:PR00170
PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015 GO:GO:0035725
GO:GO:0005248 EMBL:AC127029 GO:GO:0001518 HGNC:HGNC:10591
ProteinModelPortal:J3QQZ1 Ensembl:ENST00000578147 Uniprot:J3QQZ1
Length = 1836
Score = 114 (45.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE--VNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G ++ + E + P + Y+P+++TL R+ EE CA I
Sbjct: 1676 CLDILFALTKEVLGDSGE-MDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKI 1734
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1735 QRAYRRH 1741
>UNIPROTKB|P35499 [details] [associations]
symbol:SCN4A "Sodium channel protein type 4 subunit alpha"
species:9606 "Homo sapiens" [GO:0001518 "voltage-gated sodium
channel complex" evidence=IEA] [GO:0005248 "voltage-gated sodium
channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0006814 "sodium ion transport"
evidence=TAS] [GO:0006936 "muscle contraction" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001696 InterPro:IPR005821
InterPro:IPR008052 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 PRINTS:PR01665 PROSITE:PS50096 SMART:SM00015
Reactome:REACT_111045 GO:GO:0005887 Orphanet:98913 GO:GO:0006936
GO:GO:0005248 eggNOG:COG1226 Orphanet:681 EMBL:AC127029
DrugBank:DB00555 HOGENOM:HOG000231755 KO:K04837 GO:GO:0001518
HOVERGEN:HBG053100 EMBL:M81758 EMBL:L04236 EMBL:L04216 EMBL:L04217
EMBL:L04218 EMBL:L04219 EMBL:L04220 EMBL:L04221 EMBL:L04222
EMBL:L04223 EMBL:L04224 EMBL:L04225 EMBL:L04226 EMBL:L04227
EMBL:L04228 EMBL:L04229 EMBL:L04230 EMBL:L04231 EMBL:L04232
EMBL:L04233 EMBL:L04234 EMBL:L04235 EMBL:AY212253 EMBL:L01983
EMBL:L01962 EMBL:L01963 EMBL:L01964 EMBL:L01965 EMBL:L01966
EMBL:L01967 EMBL:L01968 EMBL:L01969 EMBL:L01970 EMBL:L01971
EMBL:L01972 EMBL:L01973 EMBL:L01974 EMBL:L01975 EMBL:L01976
EMBL:L01977 EMBL:L01978 EMBL:L01979 EMBL:L01980 EMBL:L01981
EMBL:L01982 EMBL:S82622 IPI:IPI00292393 PIR:I51964 PIR:I54323
PIR:I64893 PIR:JS0648 RefSeq:NP_000325.4 UniGene:Hs.46038
ProteinModelPortal:P35499 SMR:P35499 STRING:P35499 TCDB:1.A.1.10.4
PhosphoSite:P35499 DMDM:292495096 PaxDb:P35499 PRIDE:P35499
DNASU:6329 Ensembl:ENST00000435607 GeneID:6329 KEGG:hsa:6329
UCSC:uc002jds.1 CTD:6329 GeneCards:GC17M062015 H-InvDB:HIX0039131
HGNC:HGNC:10591 MIM:168300 MIM:170500 MIM:603967 MIM:608390
MIM:613345 MIM:614198 neXtProt:NX_P35499 Orphanet:99736
Orphanet:682 Orphanet:99734 Orphanet:99735 Orphanet:684
PharmGKB:PA35006 InParanoid:P35499 OMA:IIRRGAI OrthoDB:EOG4B2SW8
ChEMBL:CHEMBL2072 GenomeRNAi:6329 NextBio:24570 ArrayExpress:P35499
Bgee:P35499 CleanEx:HS_SCN4A Genevestigator:P35499
GermOnline:ENSG00000007314 Uniprot:P35499
Length = 1836
Score = 114 (45.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE--VNTRPDEAGYDPVSSTLWRQREEYCARLI 60
C+DIL ALTK+ G ++ + E + P + Y+P+++TL R+ EE CA I
Sbjct: 1676 CLDILFALTKEVLGDSGE-MDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKI 1734
Query: 61 QHAWRKH 67
Q A+R+H
Sbjct: 1735 QRAYRRH 1741
>UNIPROTKB|F1SJS7 [details] [associations]
symbol:SCN10A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005248 "voltage-gated sodium channel activity"
evidence=IEA] [GO:0001518 "voltage-gated sodium channel complex"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001696
InterPro:IPR005821 InterPro:IPR010526 Pfam:PF00520 Pfam:PF06512
PRINTS:PR00170 SMART:SM00015 GO:GO:0035725 GO:GO:0005248
GO:GO:0044299 GO:GO:0001518 GeneTree:ENSGT00650000092939
OMA:CCPTWVK EMBL:FP102135 EMBL:FP312787 Ensembl:ENSSSCT00000012328
Uniprot:F1SJS7
Length = 1954
Score = 110 (43.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 3 CVDILDALTKDFFARKGNPIEETGDLVAE-VNTRPDEAGYDPVSSTL-WRQREEYCARLI 60
C+DIL A TK+ G ++ + + T +A Y+P+++TL W+Q E+ A +I
Sbjct: 1800 CLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQ-EDISATVI 1858
Query: 61 QHAWRKHKQCRAGGTEPGSPGSPDGRDTAVLVESDGF---SIKNGHRVVIHSRSPSQTS 116
Q A+R + R+ T G P + AV V +GF H + S + S TS
Sbjct: 1859 QKAYRSYVLQRSM-TISSPSGVPRAEEEAVPVPDEGFVTFMANENHMLPDKSETASATS 1916
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 147 147 0.00091 103 3 11 22 0.47 31
30 0.50 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 606 (64 KB)
Total size of DFA: 165 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.02u 0.07s 18.09t Elapsed: 00:00:03
Total cpu time: 18.02u 0.07s 18.09t Elapsed: 00:00:03
Start: Thu Aug 15 12:08:04 2013 End: Thu Aug 15 12:08:07 2013