Query psy14961
Match_columns 320
No_of_seqs 211 out of 2097
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 16:59:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14961.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14961hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 3.6E-46 1.2E-50 326.0 40.8 273 13-292 49-340 (340)
2 1vyh_C Platelet-activating fac 100.0 3.6E-46 1.2E-50 334.2 38.6 272 14-293 103-409 (410)
3 2pbi_B Guanine nucleotide-bind 100.0 5.5E-46 1.9E-50 326.7 38.1 265 1-292 88-354 (354)
4 3ow8_A WD repeat-containing pr 100.0 4.2E-45 1.4E-49 316.8 38.5 272 16-293 29-319 (321)
5 3iz6_a 40S ribosomal protein R 100.0 4.4E-46 1.5E-50 330.3 30.7 287 3-294 50-374 (380)
6 3frx_A Guanine nucleotide-bind 100.0 7.6E-44 2.6E-48 308.6 40.2 279 10-295 8-317 (319)
7 4g56_B MGC81050 protein; prote 100.0 3.2E-43 1.1E-47 309.4 33.2 274 17-296 40-344 (357)
8 2ynn_A Coatomer subunit beta'; 100.0 3.6E-42 1.2E-46 296.0 37.9 272 13-293 7-300 (304)
9 4ery_A WD repeat-containing pr 100.0 8.3E-42 2.8E-46 294.4 39.6 277 12-294 16-311 (312)
10 4gqb_B Methylosome protein 50; 100.0 2.9E-42 1E-46 301.6 37.0 271 18-295 29-331 (344)
11 2xzm_R RACK1; ribosome, transl 100.0 7.6E-42 2.6E-46 298.9 38.0 277 12-295 14-340 (343)
12 1nr0_A Actin interacting prote 100.0 4.4E-42 1.5E-46 322.6 37.0 286 1-295 172-567 (611)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-41 3.6E-46 298.3 36.6 282 11-296 7-336 (345)
14 4aow_A Guanine nucleotide-bind 100.0 1.2E-40 4E-45 289.7 41.1 278 11-294 30-336 (340)
15 1erj_A Transcriptional repress 100.0 6E-41 2.1E-45 298.6 38.9 270 17-295 62-389 (393)
16 2ymu_A WD-40 repeat protein; u 100.0 6.6E-41 2.3E-45 311.9 40.2 277 1-292 286-577 (577)
17 1nr0_A Actin interacting prote 100.0 6.9E-41 2.4E-45 314.5 38.3 287 1-295 41-355 (611)
18 2hes_X YDR267CP; beta-propelle 100.0 3.4E-40 1.2E-44 287.0 36.8 278 10-295 5-328 (330)
19 3dm0_A Maltose-binding peripla 100.0 2.3E-39 7.9E-44 308.4 38.8 276 13-294 376-692 (694)
20 1r5m_A SIR4-interacting protei 100.0 5.7E-39 1.9E-43 286.8 37.6 290 2-297 28-363 (425)
21 2ymu_A WD-40 repeat protein; u 100.0 8.5E-39 2.9E-43 297.7 40.2 280 1-295 245-539 (577)
22 3zwl_B Eukaryotic translation 100.0 2.8E-38 9.6E-43 277.2 40.9 279 11-299 24-350 (369)
23 2ynn_A Coatomer subunit beta'; 100.0 3.5E-39 1.2E-43 277.4 34.1 235 58-295 6-259 (304)
24 2pm7_B Protein transport prote 100.0 1.9E-39 6.7E-44 278.1 32.3 250 16-294 6-284 (297)
25 2pm9_A Protein WEB1, protein t 100.0 1.8E-40 6.2E-45 296.5 25.3 291 1-294 47-413 (416)
26 1r5m_A SIR4-interacting protei 100.0 7.2E-39 2.5E-43 286.1 34.9 283 1-294 70-424 (425)
27 1gxr_A ESG1, transducin-like e 100.0 6.3E-38 2.2E-42 271.7 39.7 282 3-293 35-335 (337)
28 3gre_A Serine/threonine-protei 100.0 7.2E-39 2.5E-43 288.6 30.0 288 3-292 47-437 (437)
29 1vyh_C Platelet-activating fac 100.0 2.4E-38 8.2E-43 283.4 33.1 233 59-295 102-369 (410)
30 3bg1_A Protein SEC13 homolog; 100.0 3.5E-39 1.2E-43 278.9 26.0 252 16-295 10-293 (316)
31 1sq9_A Antiviral protein SKI8; 100.0 4E-38 1.4E-42 279.7 33.4 278 15-294 12-394 (397)
32 3i2n_A WD repeat-containing pr 100.0 7.8E-38 2.7E-42 273.5 33.8 276 16-295 15-353 (357)
33 3ei3_B DNA damage-binding prot 100.0 4.6E-38 1.6E-42 278.6 32.3 283 3-295 57-382 (383)
34 1got_B GT-beta; complex (GTP-b 100.0 1.9E-37 6.6E-42 270.6 34.2 245 1-250 79-340 (340)
35 3vl1_A 26S proteasome regulato 100.0 6.1E-38 2.1E-42 280.7 31.5 287 1-296 80-420 (420)
36 2pbi_B Guanine nucleotide-bind 100.0 5.2E-37 1.8E-41 269.5 36.5 249 12-295 57-315 (354)
37 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-36 4.2E-41 261.1 37.9 269 10-296 9-297 (313)
38 4gqb_B Methylosome protein 50; 100.0 1.4E-37 4.6E-42 272.0 31.5 232 18-254 81-332 (344)
39 4e54_B DNA damage-binding prot 100.0 1.9E-38 6.3E-43 286.2 26.1 274 16-295 116-430 (435)
40 2j04_B YDR362CP, TAU91; beta p 100.0 9.2E-39 3.1E-43 293.3 24.1 289 1-294 185-516 (524)
41 3mmy_A MRNA export factor; mRN 100.0 2.5E-37 8.7E-42 271.0 32.2 286 4-292 24-343 (368)
42 1k8k_C P40, ARP2/3 complex 41 100.0 3.3E-37 1.1E-41 271.2 32.9 273 16-295 5-361 (372)
43 3ow8_A WD repeat-containing pr 100.0 7.5E-37 2.5E-41 264.9 33.9 243 1-251 60-319 (321)
44 4gga_A P55CDC, cell division c 100.0 1.3E-36 4.4E-41 272.9 36.4 260 1-294 127-394 (420)
45 4a11_B DNA excision repair pro 100.0 3.5E-37 1.2E-41 274.0 32.2 294 2-296 26-366 (408)
46 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-36 6.7E-41 273.5 36.5 279 1-295 141-442 (445)
47 1pgu_A Actin interacting prote 100.0 1.2E-36 4.2E-41 284.7 35.6 283 1-294 185-613 (615)
48 3v7d_B Cell division control p 100.0 5.2E-36 1.8E-40 271.9 38.6 271 12-295 114-421 (464)
49 3f3f_A Nucleoporin SEH1; struc 100.0 4.6E-37 1.6E-41 266.7 30.4 266 16-295 8-337 (351)
50 3k26_A Polycomb protein EED; W 100.0 2.4E-37 8.4E-42 271.0 27.9 272 17-294 16-365 (366)
51 4aez_A CDC20, WD repeat-contai 100.0 3.3E-36 1.1E-40 268.6 34.1 258 1-296 115-381 (401)
52 3sfz_A APAF-1, apoptotic pepti 100.0 7E-37 2.4E-41 308.3 33.3 289 1-295 639-1034(1249)
53 2pm9_A Protein WEB1, protein t 100.0 3.1E-37 1.1E-41 275.5 27.1 272 20-296 13-338 (416)
54 1pgu_A Actin interacting prote 100.0 5.8E-36 2E-40 280.1 36.4 284 2-296 145-573 (615)
55 4ggc_A P55CDC, cell division c 100.0 1.7E-35 6E-40 254.6 36.2 263 21-294 27-314 (318)
56 2oaj_A Protein SNI1; WD40 repe 100.0 4.3E-37 1.5E-41 299.6 29.3 291 1-296 81-606 (902)
57 1gxr_A ESG1, transducin-like e 100.0 5.6E-36 1.9E-40 259.5 33.2 270 16-296 6-297 (337)
58 3jrp_A Fusion protein of prote 100.0 2.4E-36 8.2E-41 266.0 31.1 254 13-295 5-287 (379)
59 4h5i_A Guanine nucleotide-exch 100.0 6.6E-37 2.3E-41 269.9 27.3 276 19-298 14-346 (365)
60 3dwl_C Actin-related protein 2 100.0 1.6E-37 5.5E-42 274.2 22.7 270 16-293 8-377 (377)
61 3vl1_A 26S proteasome regulato 100.0 4.8E-37 1.6E-41 274.9 25.9 265 22-295 59-365 (420)
62 3v7d_B Cell division control p 100.0 3.1E-35 1.1E-39 266.8 36.2 275 1-291 144-459 (464)
63 3iz6_a 40S ribosomal protein R 100.0 2.4E-36 8.1E-41 267.7 27.6 253 1-254 90-376 (380)
64 4g56_B MGC81050 protein; prote 100.0 2.8E-36 9.7E-41 265.1 27.8 238 15-257 90-347 (357)
65 1yfq_A Cell cycle arrest prote 100.0 3.6E-36 1.2E-40 261.7 27.3 269 17-292 9-321 (342)
66 2j04_B YDR362CP, TAU91; beta p 100.0 6.7E-37 2.3E-41 281.0 23.3 235 33-296 175-429 (524)
67 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.9E-35 3.1E-39 262.7 36.1 266 11-295 110-391 (445)
68 3dw8_B Serine/threonine-protei 100.0 2.7E-35 9.2E-40 265.5 31.9 269 18-292 27-443 (447)
69 1p22_A F-BOX/WD-repeat protein 100.0 3E-35 1E-39 265.2 31.8 259 18-296 132-415 (435)
70 4ery_A WD repeat-containing pr 100.0 8.1E-35 2.8E-39 250.7 33.2 236 58-296 16-269 (312)
71 2hes_X YDR267CP; beta-propelle 100.0 4.1E-35 1.4E-39 254.9 30.7 250 1-253 36-328 (330)
72 3sfz_A APAF-1, apoptotic pepti 100.0 5.7E-35 2E-39 294.4 36.4 277 14-296 610-914 (1249)
73 3frx_A Guanine nucleotide-bind 100.0 1E-34 3.6E-39 251.1 32.5 246 1-253 42-317 (319)
74 3mkq_A Coatomer beta'-subunit; 100.0 2.6E-34 8.9E-39 277.7 36.7 274 13-294 7-301 (814)
75 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-34 6.9E-39 252.1 30.7 236 57-294 7-282 (345)
76 1erj_A Transcriptional repress 100.0 6E-34 2.1E-38 253.4 33.2 244 1-252 87-388 (393)
77 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-33 4.1E-38 248.1 31.8 278 3-293 3-334 (355)
78 3mkq_A Coatomer beta'-subunit; 100.0 1.5E-33 5.1E-38 272.4 34.5 285 1-294 37-385 (814)
79 2pm7_B Protein transport prote 100.0 3E-34 1E-38 245.8 26.4 209 60-295 4-238 (297)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 5.1E-34 1.7E-38 254.4 27.1 268 23-295 38-342 (402)
81 3jro_A Fusion protein of prote 100.0 3.2E-34 1.1E-38 275.1 27.3 251 15-294 5-284 (753)
82 2xyi_A Probable histone-bindin 100.0 3E-33 1E-37 251.8 31.9 258 14-298 123-413 (430)
83 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-33 7.1E-38 273.7 32.5 189 16-214 14-247 (902)
84 2xzm_R RACK1; ribosome, transl 100.0 1.1E-32 3.9E-37 240.7 33.6 231 58-295 14-285 (343)
85 3k26_A Polycomb protein EED; W 100.0 6.6E-34 2.3E-38 249.2 22.0 246 1-252 46-365 (366)
86 3dm0_A Maltose-binding peripla 100.0 4.1E-32 1.4E-36 258.5 34.0 246 1-252 407-692 (694)
87 4gq1_A NUP37; propeller, trans 100.0 1E-33 3.6E-38 251.9 21.3 260 26-288 96-383 (393)
88 1sq9_A Antiviral protein SKI8; 100.0 2.8E-32 9.6E-37 242.0 30.1 251 1-254 38-396 (397)
89 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-31 4E-36 242.8 34.6 244 21-294 104-390 (450)
90 2w18_A PALB2, fancn, partner a 100.0 6E-32 2.1E-36 230.3 30.1 263 1-293 65-355 (356)
91 3gre_A Serine/threonine-protei 100.0 3.8E-33 1.3E-37 251.2 23.7 257 26-298 34-362 (437)
92 3odt_A Protein DOA1; ubiquitin 100.0 3.3E-31 1.1E-35 227.2 33.5 245 1-257 41-300 (313)
93 3bg1_A Protein SEC13 homolog; 100.0 2.8E-33 9.6E-38 241.9 19.6 211 60-295 8-247 (316)
94 4aow_A Guanine nucleotide-bind 100.0 9.4E-31 3.2E-35 227.1 34.6 255 36-296 9-287 (340)
95 3dwl_C Actin-related protein 2 100.0 3.1E-33 1.1E-37 246.8 17.5 226 63-293 9-280 (377)
96 1k8k_C P40, ARP2/3 complex 41 100.0 4E-31 1.4E-35 232.3 28.8 229 62-295 5-274 (372)
97 3dw8_B Serine/threonine-protei 100.0 7.8E-32 2.7E-36 242.8 24.8 233 63-296 26-374 (447)
98 4aez_A CDC20, WD repeat-contai 100.0 9.1E-31 3.1E-35 233.4 31.4 235 22-295 96-336 (401)
99 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-31 4.1E-36 234.1 25.0 255 1-293 60-331 (343)
100 2j04_A TAU60, YPL007P, hypothe 100.0 5.7E-31 1.9E-35 237.9 29.5 238 19-294 15-296 (588)
101 3i2n_A WD repeat-containing pr 100.0 2.7E-31 9.1E-36 232.0 26.7 250 1-255 46-355 (357)
102 3ei3_B DNA damage-binding prot 100.0 4.2E-31 1.4E-35 233.8 28.0 245 1-253 98-382 (383)
103 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-31 1.1E-35 238.7 27.5 255 1-274 155-434 (435)
104 4ggc_A P55CDC, cell division c 100.0 5.8E-30 2E-34 220.1 33.6 243 1-254 47-316 (318)
105 3zwl_B Eukaryotic translation 100.0 5.3E-30 1.8E-34 224.4 33.7 232 59-295 26-304 (369)
106 3bws_A Protein LP49; two-domai 100.0 8.9E-30 3E-34 228.7 35.3 276 11-294 115-431 (433)
107 3lrv_A PRE-mRNA-splicing facto 100.0 2.8E-31 9.6E-36 231.8 23.7 232 27-296 44-293 (343)
108 3jrp_A Fusion protein of prote 100.0 5.7E-31 1.9E-35 231.6 25.1 213 59-296 5-241 (379)
109 1l0q_A Surface layer protein; 100.0 1.3E-28 4.3E-33 218.2 38.8 254 1-295 14-275 (391)
110 1yfq_A Cell cycle arrest prote 100.0 1.5E-30 5.2E-35 226.1 25.5 229 62-296 8-283 (342)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-29 4.4E-34 229.4 30.8 245 20-293 5-337 (450)
112 2j04_A TAU60, YPL007P, hypothe 100.0 6.4E-32 2.2E-36 244.1 15.3 233 18-284 84-350 (588)
113 4e54_B DNA damage-binding prot 100.0 5.5E-30 1.9E-34 230.8 25.9 233 61-295 115-387 (435)
114 2aq5_A Coronin-1A; WD40 repeat 100.0 4.2E-30 1.4E-34 229.0 24.6 251 1-255 59-344 (402)
115 3f3f_A Nucleoporin SEH1; struc 100.0 5.7E-29 1.9E-33 215.6 29.4 230 1-257 35-341 (351)
116 3vu4_A KMHSV2; beta-propeller 100.0 1E-28 3.4E-33 216.8 27.4 224 60-295 14-271 (355)
117 4h5i_A Guanine nucleotide-exch 100.0 1.7E-28 5.8E-33 216.1 28.6 202 18-252 132-342 (365)
118 3mmy_A MRNA export factor; mRN 100.0 8.2E-29 2.8E-33 216.7 26.3 238 1-250 66-343 (368)
119 4gga_A P55CDC, cell division c 100.0 3.4E-28 1.2E-32 218.1 30.7 238 21-295 107-353 (420)
120 4a11_B DNA excision repair pro 100.0 1.7E-28 5.8E-33 217.9 28.0 282 1-294 68-404 (408)
121 3jro_A Fusion protein of prote 100.0 3.2E-29 1.1E-33 240.5 23.9 211 60-295 4-238 (753)
122 2xyi_A Probable histone-bindin 100.0 4.5E-28 1.5E-32 218.0 28.8 251 21-295 47-353 (430)
123 3bws_A Protein LP49; two-domai 100.0 1.8E-26 6.1E-31 207.1 29.9 269 19-295 60-390 (433)
124 4gq1_A NUP37; propeller, trans 100.0 3.3E-28 1.1E-32 216.3 16.8 247 23-296 19-349 (393)
125 2w18_A PALB2, fancn, partner a 100.0 5.8E-27 2E-31 199.7 23.3 210 19-251 111-355 (356)
126 1l0q_A Surface layer protein; 100.0 7.5E-25 2.6E-29 193.9 34.6 254 1-294 56-341 (391)
127 1nir_A Nitrite reductase; hemo 100.0 4.4E-25 1.5E-29 203.8 32.6 288 1-296 161-515 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.3E-25 4.5E-30 201.0 26.2 255 1-296 95-388 (415)
129 1nir_A Nitrite reductase; hemo 99.9 3.2E-24 1.1E-28 198.1 29.3 261 26-296 144-459 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-23 3.9E-28 188.4 30.4 235 1-277 161-410 (415)
131 1ri6_A Putative isomerase YBHE 99.9 1.1E-22 3.9E-27 176.1 33.0 267 1-294 17-307 (343)
132 2ojh_A Uncharacterized protein 99.9 8.2E-24 2.8E-28 179.1 24.6 248 1-286 24-293 (297)
133 3u4y_A Uncharacterized protein 99.9 3.9E-22 1.3E-26 172.5 31.0 265 1-298 22-307 (331)
134 3vgz_A Uncharacterized protein 99.9 3.9E-21 1.3E-25 167.3 33.1 252 1-287 71-336 (353)
135 3hfq_A Uncharacterized protein 99.9 3E-21 1E-25 168.2 32.1 261 3-293 22-315 (347)
136 2ecf_A Dipeptidyl peptidase IV 99.9 4.2E-22 1.4E-26 190.7 28.7 266 19-294 36-412 (741)
137 1xfd_A DIP, dipeptidyl aminope 99.9 1.5E-22 5.3E-27 193.2 23.0 287 1-293 39-391 (723)
138 2ecf_A Dipeptidyl peptidase IV 99.9 9.3E-22 3.2E-26 188.3 26.6 283 1-293 66-457 (741)
139 1k32_A Tricorn protease; prote 99.9 4.4E-21 1.5E-25 190.3 31.6 278 3-294 187-501 (1045)
140 1pby_B Quinohemoprotein amine 99.9 2.1E-20 7.1E-25 161.5 30.9 249 1-263 13-320 (337)
141 1pby_B Quinohemoprotein amine 99.9 1.6E-20 5.3E-25 162.3 28.1 251 32-295 2-310 (337)
142 2z3z_A Dipeptidyl aminopeptida 99.9 3.4E-21 1.2E-25 183.5 25.4 281 3-293 47-389 (706)
143 3scy_A Hypothetical bacterial 99.9 2E-19 7E-24 157.5 34.8 267 2-293 30-335 (361)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 3E-21 1E-25 173.5 23.6 207 18-254 35-279 (434)
145 1k32_A Tricorn protease; prote 99.9 8.1E-21 2.8E-25 188.4 28.8 283 1-295 82-461 (1045)
146 3o4h_A Acylamino-acid-releasin 99.9 3.3E-21 1.1E-25 179.7 22.1 232 19-293 21-274 (582)
147 3vgz_A Uncharacterized protein 99.9 1.1E-19 3.7E-24 158.2 29.5 240 20-295 41-303 (353)
148 3u4y_A Uncharacterized protein 99.9 1.4E-19 4.9E-24 156.3 28.4 234 26-295 4-252 (331)
149 2z3z_A Dipeptidyl aminopeptida 99.9 9.5E-20 3.2E-24 173.5 28.5 261 1-295 103-435 (706)
150 2ojh_A Uncharacterized protein 99.9 4.4E-20 1.5E-24 156.0 23.0 220 36-295 17-258 (297)
151 1ri6_A Putative isomerase YBHE 99.9 1.4E-19 4.8E-24 156.6 26.0 231 33-294 7-261 (343)
152 1jmx_B Amine dehydrogenase; ox 99.9 1.4E-19 4.9E-24 157.1 24.6 235 24-295 4-325 (349)
153 1xfd_A DIP, dipeptidyl aminope 99.9 1.8E-20 6E-25 178.9 20.1 254 22-292 19-341 (723)
154 2oit_A Nucleoporin 214KDA; NH2 99.9 2.7E-20 9.3E-25 167.3 19.2 208 66-295 37-278 (434)
155 3pe7_A Oligogalacturonate lyas 99.8 1.1E-18 3.7E-23 154.1 27.2 285 3-293 14-380 (388)
156 1jof_A Carboxy-CIS,CIS-muconat 99.8 3E-18 1E-22 150.5 29.9 247 20-296 40-342 (365)
157 1jmx_B Amine dehydrogenase; ox 99.8 5.2E-18 1.8E-22 147.1 27.7 248 1-263 23-335 (349)
158 3o4h_A Acylamino-acid-releasin 99.8 5.9E-19 2E-23 164.4 23.0 246 2-294 47-314 (582)
159 2oiz_A Aromatic amine dehydrog 99.8 4.8E-17 1.6E-21 142.7 30.6 263 1-277 33-360 (361)
160 1q7f_A NHL, brain tumor CG1071 99.8 4.8E-16 1.7E-20 131.5 31.3 241 20-294 30-279 (286)
161 3scy_A Hypothetical bacterial 99.8 8.2E-17 2.8E-21 140.9 26.7 237 38-294 24-290 (361)
162 1z68_A Fibroblast activation p 99.8 1.2E-18 4.1E-23 166.3 16.1 242 24-293 20-344 (719)
163 1z68_A Fibroblast activation p 99.8 4.4E-18 1.5E-22 162.4 19.9 283 1-293 38-389 (719)
164 3fvz_A Peptidyl-glycine alpha- 99.8 1.9E-16 6.4E-21 137.1 28.0 251 20-294 24-321 (329)
165 3hfq_A Uncharacterized protein 99.8 3.4E-16 1.1E-20 136.1 29.0 230 1-256 65-322 (347)
166 2oiz_A Aromatic amine dehydrog 99.8 2.4E-16 8.2E-21 138.2 25.4 245 39-295 29-334 (361)
167 3c5m_A Oligogalacturonate lyas 99.8 9.7E-17 3.3E-21 141.7 22.3 279 4-293 15-380 (396)
168 4a5s_A Dipeptidyl peptidase 4 99.8 2.2E-17 7.4E-22 158.2 19.0 242 22-293 19-351 (740)
169 3e5z_A Putative gluconolactona 99.7 1.8E-14 6.3E-19 122.4 29.7 252 15-292 23-284 (296)
170 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.7E-15 1.6E-19 130.1 26.0 227 41-294 14-290 (365)
171 3azo_A Aminopeptidase; POP fam 99.7 6.8E-16 2.3E-20 145.8 21.4 260 2-292 50-364 (662)
172 4a5s_A Dipeptidyl peptidase 4 99.7 1.5E-15 5.2E-20 145.4 23.6 274 1-284 38-383 (740)
173 2dg1_A DRP35, lactonase; beta 99.7 1.1E-13 3.9E-18 119.4 32.9 238 14-286 39-301 (333)
174 3pe7_A Oligogalacturonate lyas 99.7 3.1E-15 1.1E-19 131.8 21.6 221 71-295 41-329 (388)
175 1rwi_B Serine/threonine-protei 99.7 5.6E-14 1.9E-18 117.5 27.1 240 21-297 25-266 (270)
176 3azo_A Aminopeptidase; POP fam 99.7 8.3E-15 2.8E-19 138.4 23.2 244 17-292 21-320 (662)
177 2gop_A Trilobed protease; beta 99.7 7.4E-14 2.5E-18 121.1 25.7 237 2-293 46-329 (347)
178 2xdw_A Prolyl endopeptidase; a 99.7 1.1E-13 3.9E-18 131.8 29.0 244 21-294 126-413 (710)
179 2z2n_A Virginiamycin B lyase; 99.6 1E-11 3.5E-16 105.0 36.1 260 18-290 13-291 (299)
180 3c5m_A Oligogalacturonate lyas 99.6 8.5E-14 2.9E-18 122.7 23.7 222 67-295 37-329 (396)
181 2dg1_A DRP35, lactonase; beta 99.6 1.1E-13 3.6E-18 119.5 23.7 239 18-294 4-262 (333)
182 2bkl_A Prolyl endopeptidase; m 99.6 1E-13 3.5E-18 131.8 23.2 237 21-294 122-396 (695)
183 1q7f_A NHL, brain tumor CG1071 99.6 1.1E-12 3.6E-17 110.8 26.6 203 63-296 27-239 (286)
184 3dsm_A Uncharacterized protein 99.6 1.1E-12 3.9E-17 113.2 26.4 253 2-296 20-303 (328)
185 2gop_A Trilobed protease; beta 99.6 5.6E-13 1.9E-17 115.6 24.4 243 19-294 14-290 (347)
186 3fvz_A Peptidyl-glycine alpha- 99.6 9.8E-13 3.4E-17 113.6 25.1 221 1-252 71-321 (329)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 9.8E-12 3.3E-16 106.1 31.0 243 20-294 18-298 (314)
188 3no2_A Uncharacterized protein 99.6 1.8E-12 6.1E-17 109.2 25.9 220 29-283 3-231 (276)
189 1qks_A Cytochrome CD1 nitrite 99.6 2.2E-11 7.4E-16 112.5 33.9 287 2-296 180-539 (567)
190 1qks_A Cytochrome CD1 nitrite 99.5 2.6E-11 8.8E-16 112.0 32.3 263 27-296 163-478 (567)
191 2mad_H Methylamine dehydrogena 99.5 5.9E-11 2E-15 104.2 33.0 259 26-295 27-350 (373)
192 2mad_H Methylamine dehydrogena 99.5 8.9E-11 3E-15 103.1 33.3 245 2-260 50-357 (373)
193 2qc5_A Streptogramin B lactona 99.5 2.3E-10 8E-15 96.5 35.0 260 19-292 19-297 (300)
194 3no2_A Uncharacterized protein 99.5 5.3E-12 1.8E-16 106.3 23.4 185 76-294 4-194 (276)
195 2xdw_A Prolyl endopeptidase; a 99.5 6.2E-12 2.1E-16 119.8 26.0 247 29-292 81-363 (710)
196 2bkl_A Prolyl endopeptidase; m 99.5 3.7E-12 1.3E-16 121.1 23.8 241 28-293 76-347 (695)
197 3hrp_A Uncharacterized protein 99.5 1.1E-10 3.6E-15 103.9 29.9 240 21-293 132-408 (409)
198 3e5z_A Putative gluconolactona 99.5 2.8E-11 9.5E-16 102.6 23.3 199 63-294 25-245 (296)
199 3sjl_D Methylamine dehydrogena 99.5 4.9E-11 1.7E-15 104.0 25.1 261 24-294 37-362 (386)
200 1yr2_A Prolyl oligopeptidase; 99.5 2.8E-11 9.7E-16 115.8 25.8 237 21-294 164-440 (741)
201 2z2n_A Virginiamycin B lyase; 99.4 9.9E-10 3.4E-14 92.6 30.8 224 64-294 13-254 (299)
202 3sjl_D Methylamine dehydrogena 99.4 1.8E-10 6.1E-15 100.5 26.3 259 2-275 62-384 (386)
203 2qe8_A Uncharacterized protein 99.4 1.2E-10 4E-15 101.2 25.3 262 20-292 17-318 (343)
204 1xip_A Nucleoporin NUP159; bet 99.4 9.5E-12 3.3E-16 108.9 17.7 180 18-239 36-230 (388)
205 3dsm_A Uncharacterized protein 99.4 1.9E-10 6.4E-15 99.3 25.8 231 1-272 66-319 (328)
206 3c75_H MADH, methylamine dehyd 99.4 1.3E-10 4.6E-15 103.0 24.8 259 29-296 82-403 (426)
207 1rwi_B Serine/threonine-protei 99.4 1.2E-10 4.1E-15 97.0 22.6 198 20-254 67-265 (270)
208 1yr2_A Prolyl oligopeptidase; 99.4 1.1E-10 3.6E-15 111.8 24.8 244 28-293 115-391 (741)
209 3g4e_A Regucalcin; six bladed 99.4 1.8E-09 6E-14 91.7 29.6 236 21-284 14-261 (297)
210 1xip_A Nucleoporin NUP159; bet 99.4 3.5E-11 1.2E-15 105.3 19.0 170 67-281 39-230 (388)
211 3dr2_A Exported gluconolactona 99.4 1.1E-09 3.9E-14 93.2 26.9 244 15-290 40-302 (305)
212 3c75_H MADH, methylamine dehyd 99.3 6.3E-10 2.1E-14 98.7 23.5 245 2-260 102-409 (426)
213 2qc5_A Streptogramin B lactona 99.3 1.5E-08 5.2E-13 85.3 31.0 223 65-295 19-260 (300)
214 2ghs_A AGR_C_1268P; regucalcin 99.3 1.1E-08 3.7E-13 88.1 30.3 222 22-284 51-291 (326)
215 3iuj_A Prolyl endopeptidase; h 99.3 1.2E-09 4E-14 103.9 24.8 233 21-293 130-403 (693)
216 3q7m_A Lipoprotein YFGL, BAMB; 99.3 7E-08 2.4E-12 84.5 32.7 243 30-292 102-375 (376)
217 1mda_H Methylamine dehydrogena 99.2 2.9E-09 1E-13 92.8 21.5 238 42-296 47-347 (368)
218 2hz6_A Endoplasmic reticulum t 99.2 8.3E-11 2.8E-15 103.2 11.4 190 76-278 8-217 (369)
219 3hxj_A Pyrrolo-quinoline quino 99.2 1.1E-08 3.6E-13 87.7 24.3 269 2-295 43-324 (330)
220 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 1.7E-08 5.9E-13 85.7 25.2 222 2-253 49-299 (314)
221 1mda_H Methylamine dehydrogena 99.2 1.3E-09 4.4E-14 95.0 17.9 253 3-274 50-366 (368)
222 3g4e_A Regucalcin; six bladed 99.2 5.2E-08 1.8E-12 82.5 26.6 208 2-242 38-261 (297)
223 3hrp_A Uncharacterized protein 99.1 2.8E-08 9.6E-13 88.2 25.2 197 67-293 132-352 (409)
224 2ece_A 462AA long hypothetical 99.1 9.9E-08 3.4E-12 84.1 27.1 244 29-283 93-399 (462)
225 1kb0_A Quinohemoprotein alcoho 99.1 4E-08 1.4E-12 92.8 26.3 245 30-281 127-536 (677)
226 1yiq_A Quinohemoprotein alcoho 99.1 2.3E-08 8E-13 94.6 23.8 245 30-281 120-534 (689)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.2E-07 1.1E-11 80.2 28.5 250 30-294 52-336 (376)
228 1yiq_A Quinohemoprotein alcoho 99.1 2.9E-08 1E-12 94.0 22.5 218 77-295 121-505 (689)
229 1kb0_A Quinohemoprotein alcoho 99.0 8.8E-08 3E-12 90.5 24.4 215 76-294 127-506 (677)
230 3iuj_A Prolyl endopeptidase; h 99.0 2.4E-08 8.1E-13 94.9 20.2 208 64-294 127-358 (693)
231 3dr2_A Exported gluconolactona 99.0 2.3E-07 7.8E-12 78.8 23.2 208 2-247 70-301 (305)
232 2ghs_A AGR_C_1268P; regucalcin 98.9 1.8E-06 6E-11 74.1 27.3 205 2-242 74-291 (326)
233 2qe8_A Uncharacterized protein 98.9 1.4E-07 4.8E-12 81.6 18.2 204 66-293 17-276 (343)
234 1k3i_A Galactose oxidase precu 98.9 1.3E-06 4.4E-11 82.4 25.9 277 24-303 190-552 (656)
235 3nol_A Glutamine cyclotransfer 98.9 1.1E-06 3.6E-11 72.1 21.6 166 111-283 46-243 (262)
236 2hz6_A Endoplasmic reticulum t 98.8 1.4E-09 4.6E-14 95.4 3.2 166 120-294 8-191 (369)
237 1fwx_A Nitrous oxide reductase 98.8 2.4E-08 8.3E-13 90.9 10.8 248 29-287 99-413 (595)
238 3nok_A Glutaminyl cyclase; bet 98.8 5.6E-06 1.9E-10 67.8 23.5 182 67-283 56-253 (268)
239 2iwa_A Glutamine cyclotransfer 98.8 4.5E-06 1.5E-10 69.0 23.3 178 110-293 23-235 (266)
240 3hxj_A Pyrrolo-quinoline quino 98.8 3.3E-07 1.1E-11 78.3 17.2 245 24-293 24-282 (330)
241 2fp8_A Strictosidine synthase; 98.7 1.7E-05 5.8E-10 67.7 26.6 256 22-296 21-314 (322)
242 2ece_A 462AA long hypothetical 98.7 4.9E-06 1.7E-10 73.4 23.0 200 23-241 141-399 (462)
243 3mbr_X Glutamine cyclotransfer 98.7 2E-05 7E-10 63.9 23.8 177 99-283 11-222 (243)
244 2iwa_A Glutamine cyclotransfer 98.6 4E-05 1.4E-09 63.3 24.6 197 21-251 22-235 (266)
245 2p4o_A Hypothetical protein; p 98.6 9.2E-05 3.1E-09 62.7 27.8 235 20-286 32-279 (306)
246 1kv9_A Type II quinohemoprotei 98.6 9.2E-06 3.1E-10 76.6 22.4 217 77-294 117-487 (668)
247 1kv9_A Type II quinohemoprotei 98.6 1.3E-05 4.3E-10 75.7 22.2 245 31-283 117-520 (668)
248 2ad6_A Methanol dehydrogenase 98.5 7E-05 2.4E-09 69.3 25.4 214 77-295 115-494 (571)
249 3nol_A Glutamine cyclotransfer 98.5 7.4E-05 2.5E-09 61.2 21.7 169 68-241 45-243 (262)
250 1npe_A Nidogen, entactin; glyc 98.5 0.00034 1.2E-08 57.7 31.7 222 19-277 35-263 (267)
251 3nok_A Glutaminyl cyclase; bet 98.5 9E-05 3.1E-09 60.7 21.4 188 19-241 54-253 (268)
252 1w6s_A Methanol dehydrogenase 98.4 0.00038 1.3E-08 64.6 28.1 210 80-295 124-503 (599)
253 2ad6_A Methanol dehydrogenase 98.4 8.5E-05 2.9E-09 68.7 23.4 242 31-281 115-523 (571)
254 3mbr_X Glutamine cyclotransfer 98.4 0.00039 1.3E-08 56.3 23.5 190 18-241 19-222 (243)
255 1fwx_A Nitrous oxide reductase 98.4 4.4E-05 1.5E-09 69.7 19.5 207 76-296 100-362 (595)
256 1w6s_A Methanol dehydrogenase 98.3 0.00045 1.5E-08 64.1 26.1 79 198-279 451-530 (599)
257 1npe_A Nidogen, entactin; glyc 98.3 0.00097 3.3E-08 54.9 30.9 229 32-294 2-237 (267)
258 4a2l_A BT_4663, two-component 98.2 0.004 1.4E-07 59.9 34.1 260 18-289 308-609 (795)
259 1flg_A Protein (quinoprotein e 98.2 0.0032 1.1E-07 58.2 30.0 216 77-294 117-515 (582)
260 4hw6_A Hypothetical protein, I 98.2 0.0035 1.2E-07 55.8 27.3 238 22-294 141-432 (433)
261 3tc9_A Hypothetical hydrolase; 98.2 0.0021 7.3E-08 57.1 25.4 237 22-294 139-429 (430)
262 2p9w_A MAL S 1 allergenic prot 98.1 0.0014 4.9E-08 55.4 21.3 115 180-295 138-265 (334)
263 2fp8_A Strictosidine synthase; 98.1 0.0011 3.7E-08 56.3 21.3 186 69-284 22-248 (322)
264 3v9f_A Two-component system se 98.0 0.01 3.5E-07 56.9 30.9 263 18-290 311-607 (781)
265 3v65_B Low-density lipoprotein 98.0 0.0055 1.9E-07 53.6 28.8 196 66-292 116-315 (386)
266 4a2l_A BT_4663, two-component 98.0 0.012 3.9E-07 56.7 34.4 259 19-292 262-568 (795)
267 1flg_A Protein (quinoprotein e 98.0 0.0015 5.2E-08 60.4 22.3 188 87-281 291-545 (582)
268 3v64_C Agrin; beta propeller, 98.0 0.006 2.1E-07 52.5 31.2 195 67-292 74-272 (349)
269 3qqz_A Putative uncharacterize 98.0 0.0047 1.6E-07 50.5 25.5 209 61-292 22-250 (255)
270 1k3i_A Galactose oxidase precu 97.9 0.0011 3.6E-08 62.5 20.2 235 2-242 222-530 (656)
271 3amr_A 3-phytase; beta-propell 97.9 0.0089 3E-07 51.1 22.5 200 29-260 38-271 (355)
272 3v9f_A Two-component system se 97.9 0.023 7.7E-07 54.5 33.0 259 19-289 210-519 (781)
273 2xe4_A Oligopeptidase B; hydro 97.8 0.003 1E-07 60.4 21.5 112 21-139 175-303 (751)
274 2xe4_A Oligopeptidase B; hydro 97.6 0.0049 1.7E-07 58.9 19.7 193 67-292 175-395 (751)
275 2p4o_A Hypothetical protein; p 97.5 0.032 1.1E-06 46.8 24.8 195 67-294 33-241 (306)
276 4hw6_A Hypothetical protein, I 97.5 0.041 1.4E-06 48.8 22.4 198 69-293 142-372 (433)
277 3sov_A LRP-6, low-density lipo 97.5 0.04 1.4E-06 46.7 21.1 132 181-315 81-216 (318)
278 3kya_A Putative phosphatase; s 97.4 0.066 2.3E-06 48.1 25.9 254 22-295 141-475 (496)
279 1n7d_A LDL receptor, low-densi 97.4 0.0043 1.5E-07 58.8 15.1 224 21-274 407-635 (699)
280 3amr_A 3-phytase; beta-propell 97.3 0.059 2E-06 46.0 22.4 192 77-295 40-263 (355)
281 2xbg_A YCF48-like protein; pho 97.3 0.058 2E-06 45.8 26.2 111 178-292 204-319 (327)
282 3v65_B Low-density lipoprotein 97.3 0.071 2.4E-06 46.4 26.4 217 20-272 116-337 (386)
283 1ijq_A LDL receptor, low-densi 97.3 0.069 2.3E-06 45.1 29.6 212 20-261 30-246 (316)
284 2ism_A Putative oxidoreductase 97.2 0.081 2.8E-06 45.4 23.9 58 225-283 270-333 (352)
285 1ijq_A LDL receptor, low-densi 97.2 0.074 2.5E-06 44.9 32.0 224 33-293 3-236 (316)
286 3p5b_L Low density lipoprotein 97.2 0.096 3.3E-06 45.9 31.4 223 19-271 111-338 (400)
287 3tc9_A Hypothetical hydrolase; 97.2 0.012 4E-07 52.3 15.1 132 159-294 160-300 (430)
288 2p9w_A MAL S 1 allergenic prot 97.1 0.033 1.1E-06 47.1 16.2 116 181-296 65-216 (334)
289 3m0c_C LDL receptor, low-densi 97.0 0.25 8.6E-06 47.3 30.5 209 19-257 423-636 (791)
290 3v64_C Agrin; beta propeller, 96.9 0.17 5.7E-06 43.4 28.5 206 20-261 73-283 (349)
291 3qqz_A Putative uncharacterize 96.9 0.049 1.7E-06 44.5 15.1 118 174-293 22-149 (255)
292 3kya_A Putative phosphatase; s 96.8 0.11 3.7E-06 46.8 18.1 111 180-293 187-339 (496)
293 3pbp_A Nucleoporin NUP82; beta 96.8 0.2 6.9E-06 43.8 18.7 109 180-289 67-206 (452)
294 3ei3_A DNA damage-binding prot 96.7 0.64 2.2E-05 46.6 33.2 111 21-137 515-633 (1158)
295 4a0p_A LRP6, LRP-6, low-densit 96.6 0.46 1.6E-05 44.2 31.8 248 33-318 8-259 (628)
296 3sov_A LRP-6, low-density lipo 96.6 0.27 9.2E-06 41.5 28.5 220 40-293 12-236 (318)
297 2vpj_A Kelch-like protein 12; 96.6 0.25 8.5E-06 41.0 21.7 96 189-286 159-264 (301)
298 3ii7_A Kelch-like protein 7; p 96.6 0.26 9E-06 41.0 22.4 94 189-286 149-258 (306)
299 2vpj_A Kelch-like protein 12; 96.5 0.27 9.1E-06 40.8 21.4 64 189-254 206-279 (301)
300 3pbp_A Nucleoporin NUP82; beta 96.4 0.47 1.6E-05 41.6 20.5 160 75-248 30-207 (452)
301 3m0c_C LDL receptor, low-densi 96.3 0.77 2.6E-05 43.9 30.0 197 65-293 423-630 (791)
302 3s94_A LRP-6, low-density lipo 96.3 0.73 2.5E-05 42.8 22.6 133 180-315 85-221 (619)
303 1n7d_A LDL receptor, low-densi 96.3 0.027 9.3E-07 53.2 10.9 195 68-293 408-612 (699)
304 2xn4_A Kelch-like protein 2; s 96.2 0.4 1.4E-05 39.7 21.2 65 189-255 204-278 (302)
305 3s94_A LRP-6, low-density lipo 96.2 0.8 2.7E-05 42.5 29.7 85 225-309 351-437 (619)
306 2xn4_A Kelch-like protein 2; s 96.1 0.51 1.7E-05 39.1 22.9 101 189-293 155-274 (302)
307 3ii7_A Kelch-like protein 7; p 96.1 0.51 1.8E-05 39.1 21.6 64 189-254 200-273 (306)
308 3p5b_L Low density lipoprotein 96.0 0.72 2.5E-05 40.2 30.6 223 33-292 85-317 (400)
309 3a9g_A Putative uncharacterize 95.9 0.69 2.4E-05 39.6 22.6 59 225-283 261-330 (354)
310 2uvk_A YJHT; unknown function, 95.9 0.71 2.4E-05 39.2 18.6 68 30-99 19-98 (357)
311 3sre_A PON1, serum paraoxonase 95.8 0.79 2.7E-05 39.3 24.2 100 180-285 166-287 (355)
312 4a0p_A LRP6, LRP-6, low-densit 95.8 1.2 4.2E-05 41.3 33.1 136 180-317 341-486 (628)
313 1zgk_A Kelch-like ECH-associat 95.7 0.73 2.5E-05 38.3 20.8 94 189-286 168-273 (308)
314 1tl2_A L10, protein (tachylect 95.5 0.026 8.9E-07 44.8 6.1 104 180-289 42-157 (236)
315 3sre_A PON1, serum paraoxonase 95.5 1 3.5E-05 38.6 19.0 110 181-294 114-251 (355)
316 2ism_A Putative oxidoreductase 95.4 0.61 2.1E-05 39.9 14.9 101 180-283 32-153 (352)
317 2xbg_A YCF48-like protein; pho 95.0 1.4 4.8E-05 37.1 29.6 228 20-288 36-272 (327)
318 3a9g_A Putative uncharacterize 94.8 0.66 2.3E-05 39.7 13.6 102 180-283 30-153 (354)
319 1zgk_A Kelch-like ECH-associat 94.7 1.5 5.2E-05 36.3 21.0 64 189-254 215-288 (308)
320 2xzh_A Clathrin heavy chain 1; 94.7 1.7 5.8E-05 36.7 27.8 207 24-260 71-297 (365)
321 1cru_A Protein (soluble quinop 94.7 1.1 3.8E-05 39.8 15.0 105 180-284 28-163 (454)
322 2zwa_A Leucine carboxyl methyl 94.6 3 0.0001 39.3 22.1 231 29-284 396-674 (695)
323 3das_A Putative oxidoreductase 94.6 1.9 6.5E-05 36.8 15.7 105 180-284 33-159 (347)
324 2xzh_A Clathrin heavy chain 1; 94.2 2.2 7.6E-05 36.0 23.2 202 2-210 90-333 (365)
325 1bpo_A Protein (clathrin); cla 93.8 3.3 0.00011 36.5 27.4 200 24-259 70-295 (494)
326 1xi4_A Clathrin heavy chain; a 93.7 4.6 0.00016 41.2 17.9 201 25-257 71-293 (1630)
327 1cru_A Protein (soluble quinop 93.6 3.7 0.00013 36.4 18.6 21 261-282 225-245 (454)
328 2g8s_A Glucose/sorbosone dehyd 93.1 3.4 0.00012 35.2 14.6 101 180-281 67-214 (353)
329 4asc_A Kelch repeat and BTB do 92.7 3.8 0.00013 33.9 24.1 52 189-242 196-252 (315)
330 3sbq_A Nitrous-oxide reductase 92.6 0.64 2.2E-05 42.2 9.3 107 181-288 325-461 (638)
331 4asc_A Kelch repeat and BTB do 92.5 4 0.00014 33.8 23.1 93 189-285 148-253 (315)
332 1bpo_A Protein (clathrin); cla 92.3 5.6 0.00019 35.1 22.7 203 2-211 89-333 (494)
333 3ei3_A DNA damage-binding prot 92.2 10 0.00036 38.0 31.8 251 28-294 283-590 (1158)
334 3s25_A Hypothetical 7-bladed b 92.2 4.5 0.00015 33.7 17.4 88 184-282 150-240 (302)
335 3das_A Putative oxidoreductase 91.8 5.5 0.00019 33.9 25.9 74 21-96 33-116 (347)
336 2be1_A Serine/threonine-protei 91.6 2.5 8.7E-05 35.8 11.7 116 122-261 11-138 (339)
337 2be1_A Serine/threonine-protei 91.4 5.9 0.0002 33.6 18.8 98 78-175 11-138 (339)
338 2g8s_A Glucose/sorbosone dehyd 91.1 6.5 0.00022 33.4 25.9 58 225-282 273-340 (353)
339 2wg3_C Hedgehog-interacting pr 90.3 6 0.00021 35.2 13.4 106 181-286 16-160 (463)
340 1xi4_A Clathrin heavy chain; a 89.8 7.7 0.00026 39.6 14.4 200 3-209 90-331 (1630)
341 1tl2_A L10, protein (tachylect 87.8 8.9 0.00031 30.4 14.7 112 67-205 42-159 (236)
342 2uvk_A YJHT; unknown function, 87.4 4.3 0.00015 34.3 10.2 11 88-98 286-296 (357)
343 2woz_A Kelch repeat and BTB do 86.7 12 0.00042 30.8 22.2 94 189-286 158-264 (318)
344 2woz_A Kelch repeat and BTB do 82.9 18 0.00063 29.7 23.6 92 3-99 28-139 (318)
345 3ott_A Two-component system se 79.2 43 0.0015 31.5 29.4 234 17-292 19-257 (758)
346 3zwu_A Alkaline phosphatase PH 76.2 12 0.0004 34.4 8.8 58 225-282 478-548 (592)
347 3sbq_A Nitrous-oxide reductase 74.9 7.6 0.00026 35.4 7.0 75 225-300 325-413 (638)
348 2zwa_A Leucine carboxyl methyl 73.5 27 0.00093 32.7 10.9 73 24-98 494-579 (695)
349 4gq2_M Nucleoporin NUP120; bet 73.4 61 0.0021 31.7 13.6 38 180-217 237-274 (950)
350 4a9v_A PHOX; hydrolase, beta-p 67.1 29 0.001 31.7 9.0 60 224-283 477-549 (592)
351 3q6k_A 43.2 kDa salivary prote 66.2 63 0.0022 27.7 25.8 188 88-284 124-343 (381)
352 2wg3_C Hedgehog-interacting pr 63.2 80 0.0027 27.9 13.0 26 111-138 17-43 (463)
353 4gq2_M Nucleoporin NUP120; bet 59.9 13 0.00046 36.3 6.0 37 67-103 237-273 (950)
354 3qhy_B Beta-lactamase inhibito 55.5 81 0.0028 25.5 17.7 207 67-293 25-244 (282)
355 3f7f_A Nucleoporin NUP120; nuc 54.8 19 0.00066 33.8 5.7 37 66-104 222-258 (729)
356 4fhn_B Nucleoporin NUP120; pro 53.8 14 0.00047 37.0 5.0 38 180-217 239-276 (1139)
357 3f7f_A Nucleoporin NUP120; nuc 52.4 31 0.001 32.5 6.7 37 180-218 223-259 (729)
358 4fhn_B Nucleoporin NUP120; pro 47.0 15 0.00053 36.7 4.2 34 70-103 242-275 (1139)
359 4a9v_A PHOX; hydrolase, beta-p 37.9 2E+02 0.007 26.2 9.5 61 180-241 477-549 (592)
360 3zwu_A Alkaline phosphatase PH 35.0 1.9E+02 0.0064 26.5 9.0 59 181-240 478-548 (592)
361 3s25_A Hypothetical 7-bladed b 33.8 1.9E+02 0.0066 23.5 21.6 61 185-252 190-254 (302)
362 1q47_A Semaphorin 3A; beta pro 25.8 1.6E+02 0.0056 26.2 6.9 56 236-291 423-488 (495)
363 3nvq_A Semaphorin-7A; beta-pro 21.5 2.2E+02 0.0076 26.0 6.9 57 235-291 381-445 (590)
364 3al9_A Plexin-A2; beta-propell 20.8 3.1E+02 0.011 24.7 7.7 58 234-291 413-477 (539)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.6e-46 Score=326.02 Aligned_cols=273 Identities=38% Similarity=0.715 Sum_probs=241.6
Q ss_pred EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961 13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW 92 (320)
Q Consensus 13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 92 (320)
..+..|...|.+++|+|++++|++|+.||.|++||+.. ......+..|...|.++.|+++++++++|+.|+.|++|
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYT----TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT----CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC----CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 44567889999999999999999999999999999743 22344567889999999999999999999999999999
Q ss_pred ECCCc----ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc--------------
Q psy14961 93 DVESS----QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------------- 154 (320)
Q Consensus 93 d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-------------- 154 (320)
++.+. .....+.+|.+.+.++.+.+. ..+++++.|+.|++||+++++.+..+.+|...+
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDD---NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCC---CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 99765 345667889999999888653 469999999999999999999888887765432
Q ss_pred -cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961 155 -TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS 233 (320)
Q Consensus 155 -~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 233 (320)
+.|+.|++||++++.+...+.+|...|.+++|+|++++|++|+.||+|++||++.++.+..+........+.+++|+|+
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 3589999999999999999999999999999999999999999999999999999887766655444446789999999
Q ss_pred CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
|++|++|+.||.|++||..+...+..+.+|.++|++++|+|||++|+|||.|++|++|+
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999889999999999999999999999999999999999996
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.6e-46 Score=334.16 Aligned_cols=272 Identities=25% Similarity=0.463 Sum_probs=244.3
Q ss_pred EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961 14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93 (320)
Q Consensus 14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 93 (320)
.+..|...|++++|+|++++|++|+.||.|++||+... .....+.+|...|.++.|++++++|++|+.|++|++||
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~----~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG----DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC----CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 35568889999999999999999999999999998532 33456788999999999999999999999999999999
Q ss_pred CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCC
Q psy14961 94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDK 158 (320)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~ 158 (320)
+.+++++..+.+|...|.++++.| +++.|++|+.|+.|++||++++.++..+.+|...+ +.|+
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p--~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMP--NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeC--CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 999999999999999999998865 57899999999999999999999988887775432 3589
Q ss_pred eEEEEECcCCeeeeeecCCCCCeEEEEEcCC--------------------CCEEEEeeCCCeEEEEECCCCeeEeEEec
Q psy14961 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--------------------GDAVATGSDDATCRLFDLRADKEVACYKK 218 (320)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--------------------g~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 218 (320)
.|++||++++.+...+.+|...|.+++|+|+ |.+|++|+.|++|++||+++++.+..+..
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 9999999999999999999999999999996 67899999999999999999988776655
Q ss_pred CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 219 ~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
+.. .+.+++|+|+|++|++|+.||+|++||..+...+..+.+|...|++++|+|++++|+|||.|++||+|+.
T Consensus 337 h~~--~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 337 HDN--WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CSS--CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCC--cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 432 3578999999999999999999999999988888899999999999999999999999999999999985
No 3
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.5e-46 Score=326.66 Aligned_cols=265 Identities=71% Similarity=1.163 Sum_probs=236.6
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC--cccccccccccccCeEEEEecCCCC
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIFPNSDQ 78 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~ 78 (320)
|+|||..+.+....+..|..+|.+++|+|+|.+|++|+.|+.+++|++..... .......+..|...|.++.|++++.
T Consensus 88 v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 167 (354)
T 2pbi_B 88 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM 167 (354)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS
T ss_pred EEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC
Confidence 57999999998888888999999999999999999999999999999864321 1233445678999999999999999
Q ss_pred EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961 79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK 158 (320)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~ 158 (320)
.|++++.|++|++||+++++++..+.+|...|.+++++|+++++.|++|+.||.|++||+++++++.
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~------------- 234 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ------------- 234 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE-------------
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE-------------
Confidence 9999999999999999999999999999999999999988788999999999999999988765443
Q ss_pred eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEE
Q psy14961 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLF 238 (320)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 238 (320)
.+.+|...|.+++|+|++++|++|+.|++|++||++.++.+..+........+.+++|+|++.+|+
T Consensus 235 --------------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~ 300 (354)
T 2pbi_B 235 --------------AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLF 300 (354)
T ss_dssp --------------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred --------------EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEE
Confidence 345688899999999999999999999999999999888776665554445678899999999999
Q ss_pred EEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 239 AGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 239 ~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
+|+.|++|++||+.++..+..+.+|.+.|++++|+|||++|+|||.|++|++|+
T Consensus 301 ~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 301 AGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999988888888999999999999999999999999999999996
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.2e-45 Score=316.79 Aligned_cols=272 Identities=19% Similarity=0.311 Sum_probs=237.9
Q ss_pred EeCccceEEEEEcCC----CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961 16 TMPATWVMACAYAPS----GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL 91 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~----~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 91 (320)
..|...|++++|+|+ +.+|++|+.|+.|++|++... .......+.+|...|.++.+++++..+++++.|++|++
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~--~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l 106 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE--RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 106 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT--EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC--CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 468899999999974 679999999999999998532 22233457789999999999999999999999999999
Q ss_pred EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cC
Q psy14961 92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD 156 (320)
Q Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~ 156 (320)
||+.+++.+..+..+...+.+++++ |+++.|++++.|+.|++||++++.....+..+...+ ..
T Consensus 107 Wd~~~~~~~~~~~~~~~~~~~~~~s--pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 107 WDLENGKQIKSIDAGPVDAWTLAFS--PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp EETTTTEEEEEEECCTTCCCCEEEC--TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCEEEEEeCCCccEEEEEEC--CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence 9999999988888888888888775 568999999999999999999988776665543321 35
Q ss_pred CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961 157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL 236 (320)
Q Consensus 157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 236 (320)
|+.|++||+++++++..+.+|..+|.+++|+|++++|++|+.|+.|++||++.++....+..+.. .+.+++|+|++++
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~sp~~~~ 262 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS--WVLNVAFCPDDTH 262 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSE
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC--ceEEEEECCCCCE
Confidence 88999999999999999999999999999999999999999999999999998877666554432 3678999999999
Q ss_pred EEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 237 LFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 237 l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
|++|+.|++|++||+.++..+.++.+|.+.|.+++|+|++++|++++.|++|++||.
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999995
No 5
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.4e-46 Score=330.31 Aligned_cols=287 Identities=33% Similarity=0.610 Sum_probs=242.0
Q ss_pred EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT 82 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 82 (320)
.|+..+......+..|...|++++|+|++++|++|+.|++|++||+.. ......+..|...|.++.|+++++++++
T Consensus 50 ~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~----~~~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 50 SFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALT----SQKTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp CCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTT----TEEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred ccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CccceEEecCCCCEEEEEECCCCCEEEE
Confidence 466666666667788999999999999999999999999999999742 2334567789999999999999999999
Q ss_pred EeCCCeEEEEECCCcc-------eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-----ccC
Q psy14961 83 GSGDCTCALWDVESSQ-------LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-----EGH 150 (320)
Q Consensus 83 ~~~dg~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-----~~~ 150 (320)
|+.|+.+++||+.+.. ....+.+|.+.+.++.+.|.. +..|++|+.|+.|++||+++++.+..+ .+|
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ-ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS-SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCC-CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 9999999999986532 345577899999888876642 457999999999999999999887665 233
Q ss_pred Ccc----------------ccCCCeEEEEECc-CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961 151 HNL----------------ITDDKLVNIWDMR-TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV 213 (320)
Q Consensus 151 ~~~----------------~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~ 213 (320)
... .+.|+.|++||++ ...++..+.+|...|.+++|+|++++|++|+.||+|++||+++++.+
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence 221 1358999999998 45788889999999999999999999999999999999999998877
Q ss_pred eEEecCcc-----eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe----ecCCCceeEEEECcCCCeEEEecC
Q psy14961 214 ACYKKDSI-----LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL----MGHENRVSCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 214 ~~~~~~~~-----~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~----~~h~~~i~~i~~s~~~~~l~s~s~ 284 (320)
..+..... ...+.+++|+|+|.+|++|+.||.|++||......+..+ .+|.+.|++++|+|||++|+|||.
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 66543321 123578999999999999999999999999887777666 689999999999999999999999
Q ss_pred CCceEeeecc
Q psy14961 285 DTTLRDEESK 294 (320)
Q Consensus 285 D~~ir~~~~~ 294 (320)
|++|++|+..
T Consensus 365 D~~i~iW~~~ 374 (380)
T 3iz6_a 365 DKNLKIWAFS 374 (380)
T ss_dssp TSCEEEEECC
T ss_pred CCCEEEEecC
Confidence 9999999964
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.6e-44 Score=308.58 Aligned_cols=279 Identities=23% Similarity=0.407 Sum_probs=235.9
Q ss_pred eeEEEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecCCCCEEEEEeCCC
Q psy14961 10 TKEHSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDC 87 (320)
Q Consensus 10 ~~~~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 87 (320)
.....+..|...|.+++|+|++ ++|++|+.|++|++|++...+.. ......+.+|...|.++.|+++++++++|+.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 3445667899999999999965 89999999999999998643322 223456789999999999999999999999999
Q ss_pred eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--------------
Q psy14961 88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL-------------- 153 (320)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~-------------- 153 (320)
+|++||+.+++.+..+.+|...|.++++.+ ++..|++|+.|+.|++||++. .++..+.+|...
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDK--KASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECT--TSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC-----
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCC
Confidence 999999999999999999999999988754 688999999999999999974 455555444321
Q ss_pred -------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961 154 -------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT 226 (320)
Q Consensus 154 -------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 226 (320)
.+.|+.|++||+++.+....+.+|...|.+++|+|+|++|++++.||+|++||+.+++.+..+.... .+.
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~v~ 241 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD---EVF 241 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS---CEE
T ss_pred CccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC---cEE
Confidence 1368899999999999999999999999999999999999999999999999999988777665543 357
Q ss_pred EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee--------cCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM--------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~--------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
+++|+|++.+|++++.+ .+++|+......+..+. .|...+.+++|+|||++|++|+.|++||+|+..+
T Consensus 242 ~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 242 SLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 89999999999998855 59999987766555443 3466899999999999999999999999999753
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.2e-43 Score=309.36 Aligned_cols=274 Identities=18% Similarity=0.281 Sum_probs=216.5
Q ss_pred eCccceEEEEEcCCCCEEEEecC------CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961 17 MPATWVMACAYAPSGSVVASGGL------DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA 90 (320)
Q Consensus 17 ~~~~~V~~~~~~~~~~~l~s~~~------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 90 (320)
.|...|.+++|+|||++|++|+. |+.+++|+................|...|.++.|++++ .+++++.||+|+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~ 118 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGAVE 118 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSCEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCEEE
Confidence 57889999999999999999997 67888887643222222333445788899999999876 577788999999
Q ss_pred EEECCCcceee----ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------------
Q psy14961 91 LWDVESSQLLQ----SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------------ 154 (320)
Q Consensus 91 iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------------ 154 (320)
+||+.+++... ...+|...|.+++++ +++++|++|+.|+.|++||+++++++..+.+|...+
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~s--pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVF--SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEEC--SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 99998876432 234788999998885 468999999999999999999999888877665432
Q ss_pred ----cCCCeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEE
Q psy14961 155 ----TDDKLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATS 227 (320)
Q Consensus 155 ----~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 227 (320)
..|+.|++||++++++...+ ..|...+.+++|+|++ .+|++|+.|+.|++||+++++.+..+..+.. .+.+
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~--~v~~ 274 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ--NITG 274 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS--CEEE
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccce--eEEE
Confidence 35889999999998876654 4567789999999974 6889999999999999998877666554432 4678
Q ss_pred EEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecchH
Q psy14961 228 VDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 228 ~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
++|+|++ ++|++|+.|++|++||+.+++.+. ..+|.+.|++|+|+| |+++|+|||.|++|++|+....
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999987 589999999999999998877665 468999999999999 8999999999999999996443
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.6e-42 Score=296.03 Aligned_cols=272 Identities=19% Similarity=0.340 Sum_probs=229.4
Q ss_pred EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961 13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW 92 (320)
Q Consensus 13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 92 (320)
..+..|...|.+++|+|++++|++|+.||.|++||+.. ......+..|...|.++.|++++++|++|+.|++|++|
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYET----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC----CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 34567889999999999999999999999999999852 23345677899999999999999999999999999999
Q ss_pred ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc-EEEEeccCCccc----------------c
Q psy14961 93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHNLI----------------T 155 (320)
Q Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~~~~~~~----------------~ 155 (320)
|+++++.+..+.+|...|.+++++| ++.+|++|+.|+.|++||++++. ....+.+|...+ +
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECS--SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcC--CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9999999999999999999998865 57899999999999999998774 334455544321 3
Q ss_pred CCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec
Q psy14961 156 DDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV 232 (320)
Q Consensus 156 ~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 232 (320)
.|+.|++||+++..+...+. +|...+..++|+| ++.+|++|+.|++|++||+++++.+..+..+.. .+..++|+|
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~--~v~~~~~~p 238 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS--NVSFAVFHP 238 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS--CEEEEEECS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC--CEEEEEECC
Confidence 58999999998877665554 5668899999987 678999999999999999999988777665543 357889999
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC--eEEEecCCCceEeeec
Q psy14961 233 SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT--AFSSGSWDTTLRDEES 293 (320)
Q Consensus 233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~--~l~s~s~D~~ir~~~~ 293 (320)
++++|++|+.||+|++||..+.+.+.++..|...+++++|+|++. ++|+|+.|+ +.+|+.
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~ 300 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSL 300 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEEC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEe
Confidence 999999999999999999999999999999999999999999875 477776655 555554
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.3e-42 Score=294.44 Aligned_cols=277 Identities=25% Similarity=0.445 Sum_probs=236.3
Q ss_pred EEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961 12 EHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL 91 (320)
Q Consensus 12 ~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 91 (320)
...+..|...|.+++|+|++++|++|+.||.|++|++.. ......+..|...|.++.|++++++|++++.|+.|++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC----cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 344567888999999999999999999999999999742 2234456789999999999999999999999999999
Q ss_pred EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cC
Q psy14961 92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TD 156 (320)
Q Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~ 156 (320)
||+++++.+..+.+|...|.++++.| ++++|++++.|+.|++||+++++++..+..|...+ +.
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECS--SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcC--CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999888855 67899999999999999999998888776654332 35
Q ss_pred CCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE-ecCC
Q psy14961 157 DKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF-SVSG 234 (320)
Q Consensus 157 d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-s~~~ 234 (320)
|+.|++||+++++++..+. .+...+.+++|+|++++|++++.|+.|++||+++++.+..+..+..........+ .+++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 8899999999988777654 4667899999999999999999999999999999887776654432211122334 4678
Q ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEec--CCCceEeeecc
Q psy14961 235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGS--WDTTLRDEESK 294 (320)
Q Consensus 235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s--~D~~ir~~~~~ 294 (320)
.+|++|+.||.|++||+.+...+..+.+|.+.|.+++|+|++++|++++ .|++|++|+..
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 8999999999999999999999999999999999999999999999997 69999999863
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=301.55 Aligned_cols=271 Identities=18% Similarity=0.254 Sum_probs=216.6
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEeccc-------CCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALE-------DDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA 90 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 90 (320)
++..|.+++|+|||++|++++ |+++++||.... ............|...|.++.|+++ +.+++|+.||+|+
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~~~s~dg~v~ 106 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGILVASDSGAVE 106 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEEEEETTSEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEEEEECCCEEE
Confidence 456799999999999999887 677777763211 0111111222346678999999986 5789999999999
Q ss_pred EEECCCcceeee----cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------------
Q psy14961 91 LWDVESSQLLQS----FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------------ 154 (320)
Q Consensus 91 iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------------ 154 (320)
+||+++++.+.. +.+|.+.|.+++|+ ++|++|++|+.|+.|++||+++++++..+.+|...+
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s--pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVL--SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 999998865433 34799999999885 468999999999999999999999998887775432
Q ss_pred ----cCCCeEEEEECcCCeeeeeec--CCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEE
Q psy14961 155 ----TDDKLVNIWDMRTGYCVQSFE--GHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATS 227 (320)
Q Consensus 155 ----~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 227 (320)
+.|+.|++||++++++...+. .|...+.+++|+|+ +++|++|+.||+|++||+++++.+..+..+.. .+.+
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~--~v~~ 262 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ--CVTG 262 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS--CEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC--CEEE
Confidence 358999999999998887764 45567999999995 56889999999999999999887776665443 4678
Q ss_pred EEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeecch
Q psy14961 228 VDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 228 ~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~~ 295 (320)
++|+|++ ++|++|+.|++|++||...++.+ .+.+|.+.|++++|+|+++ +|+|||.|++|++|+...
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 9999998 58999999999999999887654 5789999999999999886 578999999999999743
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.6e-42 Score=298.88 Aligned_cols=277 Identities=18% Similarity=0.333 Sum_probs=222.1
Q ss_pred EEEEEeCccceEEEEE-----cC-CCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEecCCCCEEEE
Q psy14961 12 EHSVTMPATWVMACAY-----AP-SGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIFPNSDQQILT 82 (320)
Q Consensus 12 ~~~~~~~~~~V~~~~~-----~~-~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 82 (320)
...+..|...|++++| ++ ++++|++|+.|++|++|++...+. .......+.+|...|.++.|++++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3456679999999999 76 999999999999999999864321 11234467789999999999999999999
Q ss_pred EeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE--------------Eec
Q psy14961 83 GSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ--------------SFE 148 (320)
Q Consensus 83 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~--------------~~~ 148 (320)
|+.|++|++||+.+++.+..+.+|...|.+++|+| +++.|++++.|+.|++||+....... .+.
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP--DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS--STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC--CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence 99999999999999999999999999999998855 68899999999999999987432211 111
Q ss_pred cCC-------------ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC-eeEe
Q psy14961 149 GHH-------------NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD-KEVA 214 (320)
Q Consensus 149 ~~~-------------~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~-~~~~ 214 (320)
+.. ...+.|+.|++|| ........+.+|...|.+++|+|+|++|++|+.||.|++||+... ....
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 111 1124689999999 456677788999999999999999999999999999999999533 3333
Q ss_pred EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE--Eee-----------cCCCceeEEEECcCCCeEEE
Q psy14961 215 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN--HLM-----------GHENRVSCLQVSPDGTAFSS 281 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~--~~~-----------~h~~~i~~i~~s~~~~~l~s 281 (320)
.+.... .+.+++|+|++.++++|. |+.|++||+.+..... .+. +|...|.+++|+|+|++|++
T Consensus 251 ~~~~~~---~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s 326 (343)
T 2xzm_R 251 EFDAGS---TINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA 326 (343)
T ss_dssp EEECSS---CEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE
T ss_pred eecCCC---cEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE
Confidence 332221 367899999999887665 7789999987654322 332 68889999999999999999
Q ss_pred ecCCCceEeeecch
Q psy14961 282 GSWDTTLRDEESKN 295 (320)
Q Consensus 282 ~s~D~~ir~~~~~~ 295 (320)
|+.|++||+|+.++
T Consensus 327 g~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 327 GFTDGVIRTFSFET 340 (343)
T ss_dssp EETTSEEEEEEEEE
T ss_pred ecCCceEEEEEEEc
Confidence 99999999999643
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.4e-42 Score=322.63 Aligned_cols=286 Identities=20% Similarity=0.302 Sum_probs=227.1
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-------cccccCeEEEEe
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-------ATHTSFISCCIF 73 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~ 73 (320)
|++||..+.+....+..|...|.+++|+|+|++|++|+.|+.|++||+.... ....+ .+|...|.++.|
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~----~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEE
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc----EeeeeccccccccccCCCEEEEEE
Confidence 4799999888887788899999999999999999999999999999974321 11122 279999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCcceee-------------------------------------------ecccCccce
Q psy14961 74 PNSDQQILTGSGDCTCALWDVESSQLLQ-------------------------------------------SFHGHTGEL 110 (320)
Q Consensus 74 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~-------------------------------------------~~~~~~~~v 110 (320)
++++++|++++.|++|++||+.+++++. .+.+|...|
T Consensus 248 spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v 327 (611)
T 1nr0_A 248 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI 327 (611)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE
Confidence 9999999999999999999998765433 234688888
Q ss_pred eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-ccCCcc--------------ccCCCeEEEEECcCCee-----
Q psy14961 111 MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-EGHHNL--------------ITDDKLVNIWDMRTGYC----- 170 (320)
Q Consensus 111 ~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~~~~~~--------------~~~d~~i~iwd~~~~~~----- 170 (320)
.+++++ |+|++|++++.|+.|++||+.++.+...+ .+|... ...|+.+++|+...+.+
T Consensus 328 ~~l~~s--pdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~ 405 (611)
T 1nr0_A 328 TALSSS--ADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKA 405 (611)
T ss_dssp EEEEEC--TTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSC
T ss_pred EEEEEe--CCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccce
Confidence 888775 57899999999999999999988766544 222221 23577888888654321
Q ss_pred ------------------------------------eeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961 171 ------------------------------------VQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA 214 (320)
Q Consensus 171 ------------------------------------~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~ 214 (320)
+..+ .|...+.+++|+|+|++|++|+.|++|++||+..++...
T Consensus 406 ~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~ 484 (611)
T 1nr0_A 406 VANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE 484 (611)
T ss_dssp CEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEE
T ss_pred eeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceee
Confidence 1111 255678999999999999999999999999998764321
Q ss_pred EE-ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEE--eecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961 215 CY-KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNH--LMGHENRVSCLQVSPDGTAFSSGSWDTTLRD 290 (320)
Q Consensus 215 ~~-~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~--~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~ 290 (320)
.. ..+ ...+.+++|+|+|++|++++.|++|++||..+ .+.... +.+|...|++++|+|||++|||||.|++||+
T Consensus 485 ~~~~~h--~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~l 562 (611)
T 1nr0_A 485 VKTIVH--PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 562 (611)
T ss_dssp EEEEEC--SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeccCC--CCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEE
Confidence 11 111 12468899999999999999999999999876 544443 2349999999999999999999999999999
Q ss_pred eecch
Q psy14961 291 EESKN 295 (320)
Q Consensus 291 ~~~~~ 295 (320)
|+...
T Consensus 563 W~~~~ 567 (611)
T 1nr0_A 563 WNMNK 567 (611)
T ss_dssp EETTC
T ss_pred EECCC
Confidence 99754
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=298.33 Aligned_cols=282 Identities=21% Similarity=0.316 Sum_probs=222.3
Q ss_pred eEEEEEeCcc-ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961 11 KEHSVTMPAT-WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC 89 (320)
Q Consensus 11 ~~~~~~~~~~-~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v 89 (320)
....+..|.. .|++++|+|+|++|++|+.|+.|++|++..... ........+|...|.++.|++++++|++|+.|+++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-ICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-EEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-eeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 4445566776 899999999999999999999999999853211 11112235799999999999999999999999999
Q ss_pred EEEECCCc--ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc---EEEEeccCCccc----------
Q psy14961 90 ALWDVESS--QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY---CVQSFEGHHNLI---------- 154 (320)
Q Consensus 90 ~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~---~~~~~~~~~~~~---------- 154 (320)
++|+++++ +.+..+.+|...|.+++|+| ++++|++++.|+.|++||+..+. ++..+.+|...+
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp--~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAP--SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeC--CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99998765 45678889999999998855 68899999999999999997653 344444443221
Q ss_pred -----cCCCeEEEEECcCCe--eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee---------------
Q psy14961 155 -----TDDKLVNIWDMRTGY--CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE--------------- 212 (320)
Q Consensus 155 -----~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--------------- 212 (320)
+.|+.|++||.+++. +...+.+|...|.+++|+|+|++|++++.|++|++||......
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 368999999998874 5578899999999999999999999999999999999632210
Q ss_pred EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe---------EEEEeecCCCceeEEEECcCC-CeEEEe
Q psy14961 213 VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC---------RVNHLMGHENRVSCLQVSPDG-TAFSSG 282 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~---------~~~~~~~h~~~i~~i~~s~~~-~~l~s~ 282 (320)
+...... ....+.+++|+|++..|++++.|+.|++|+..... ....+.+|...|++++|+|++ .+||||
T Consensus 244 ~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 244 ICTLSGF-HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EEEECSS-CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eEEecCC-CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 1111110 11236789999999999999999999999865321 112235899999999999987 599999
Q ss_pred cCCCceEeeecchH
Q psy14961 283 SWDTTLRDEESKNR 296 (320)
Q Consensus 283 s~D~~ir~~~~~~~ 296 (320)
|.|++|++|+..+.
T Consensus 323 s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 323 SDDGEVAFWKYQRP 336 (345)
T ss_dssp ETTSCEEEEEECC-
T ss_pred CCCCcEEEEEecCC
Confidence 99999999997554
No 14
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-40 Score=289.71 Aligned_cols=278 Identities=23% Similarity=0.381 Sum_probs=228.4
Q ss_pred eEEEEEeCccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecCCCCEEEEEeCCCe
Q psy14961 11 KEHSVTMPATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT 88 (320)
Q Consensus 11 ~~~~~~~~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 88 (320)
....+..|...|++++|+|+ +++|+|||.|++|++||+...+.. ......+.+|...|.++.|++++++|++++.|+.
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence 33456679999999999997 689999999999999998643322 2334567889999999999999999999999999
Q ss_pred EEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-eccCCc---------------
Q psy14961 89 CALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEGHHN--------------- 152 (320)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~~~~--------------- 152 (320)
|++|+............+...+....+ .++++.|++++.|+.+++||+........ ..+|..
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAF--SSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEE--CTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ceEEeecccceeeeecCCCCceeEEEE--eecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 999999988877777767777766555 45678999999999999999876543221 112211
Q ss_pred --cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE
Q psy14961 153 --LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF 230 (320)
Q Consensus 153 --~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 230 (320)
....|+.|++||++++++...+.+|...|.+++|+|++++|++|+.|+.|++||+++.+.+..+.... .+..+.|
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~ 264 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD---IINALCF 264 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS---CEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc---eEEeeec
Confidence 11368899999999999999999999999999999999999999999999999999988877766543 3577889
Q ss_pred ecCCcEEEEEeCCCeEEEEcCCCCeEEEEe---------ecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHL---------MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 231 s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~---------~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
+|++.++ +++.|+.|++||+.....+..+ .+|...|++++|+|||++|++|+.|++||+|+.+
T Consensus 265 ~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 265 SPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp CSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 9988665 4556999999998877665443 4688999999999999999999999999999964
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6e-41 Score=298.60 Aligned_cols=270 Identities=27% Similarity=0.470 Sum_probs=221.7
Q ss_pred eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc------------------ccccCeEEEEecCCCC
Q psy14961 17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA------------------THTSFISCCIFPNSDQ 78 (320)
Q Consensus 17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~------------------~h~~~v~~~~~~~~~~ 78 (320)
.|...|.+++|+|+|++|++|+ ++.+++|++..... ...+. .+...|.++.|+++++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL----VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCE----EEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCE----EEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 4888999999999999999987 68999999753211 11111 1233589999999999
Q ss_pred EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc------
Q psy14961 79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN------ 152 (320)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~------ 152 (320)
+|++|+.|+.|++||+++++.+..+.+|...|.+++|.| +++.|++++.|+.|++||++++++...+..+..
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~ 214 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP--SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 214 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC--CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEE
Confidence 999999999999999999999999999999999988854 688999999999999999999887665532211
Q ss_pred ---------cccCCCeEEEEECcCCeeeeee-------cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE---
Q psy14961 153 ---------LITDDKLVNIWDMRTGYCVQSF-------EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV--- 213 (320)
Q Consensus 153 ---------~~~~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~--- 213 (320)
..+.|+.|++||++++.++..+ .+|...|.+++|+|+|++|++|+.|++|++||++.....
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 1136889999999998877666 579999999999999999999999999999999764321
Q ss_pred ---------eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc------CCCe
Q psy14961 214 ---------ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP------DGTA 278 (320)
Q Consensus 214 ---------~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~------~~~~ 278 (320)
..+..+. ..+.+++|+|++.+|++|+.|+.|++||..++.++..+.+|.+.|.+++|+| ++++
T Consensus 295 ~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~ 372 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHK--DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV 372 (393)
T ss_dssp ------CEEEEEECCS--SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEE
T ss_pred cCCCCCcceEEEeccc--CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCE
Confidence 1122221 1357899999999999999999999999999999999999999999999986 6889
Q ss_pred EEEecCCCceEeeecch
Q psy14961 279 FSSGSWDTTLRDEESKN 295 (320)
Q Consensus 279 l~s~s~D~~ir~~~~~~ 295 (320)
|||||.|++||+|+..+
T Consensus 373 l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 373 FATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEETTSEEEEEEEEE
T ss_pred EEEECCCCcEEECcccc
Confidence 99999999999999753
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.6e-41 Score=311.94 Aligned_cols=277 Identities=29% Similarity=0.503 Sum_probs=235.7
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|++||.. .+....+..|...|.+++|+|++++|++++.|+.|++|+... .....+..|...+.++.|+++++.+
T Consensus 286 i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-----~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 286 VKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-----QHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp EEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-----CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-----CeeEEEeCCCCCEEEEEECCCCCEE
Confidence 4689865 444455667889999999999999999999999999998642 2234567889999999999999999
Q ss_pred EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------ 154 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------ 154 (320)
++++.|+.|++||. +++.+..+.+|...|.++++. +++++|++++.|+.|++||. +++.+..+.+|...+
T Consensus 360 ~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s--~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s 435 (577)
T 2ymu_A 360 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS 435 (577)
T ss_dssp EEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEEC--TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEEC
T ss_pred EEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEEC--CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEEC
Confidence 99999999999996 567778888999999988874 56899999999999999996 456666665554322
Q ss_pred ---------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961 155 ---------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA 225 (320)
Q Consensus 155 ---------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 225 (320)
..|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.. ++.+..+..+.. .+
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~~h~~--~v 511 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSS--SV 511 (577)
T ss_dssp TTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEEEECCSS--CE
T ss_pred CCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEEEEeCCCC--CE
Confidence 35889999996 567888899999999999999999999999999999999964 555555554432 46
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.+++|+|+|++|++|+.||.|++||. +++.+..+.+|.+.|++++|+|||++|+|+|.|++|++||
T Consensus 512 ~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 512 RGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 78999999999999999999999995 5678888999999999999999999999999999999997
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.9e-41 Score=314.49 Aligned_cols=287 Identities=17% Similarity=0.217 Sum_probs=241.5
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
++||+..+++....+..|...|++++|+|+|++||+|+.|++|++||+.... ......+..|...|.++.|+++++.|
T Consensus 41 v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~--~~~~~~~~~~~~~v~~v~fs~dg~~l 118 (611)
T 1nr0_A 41 VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT--HILKTTIPVFSGPVKDISWDSESKRI 118 (611)
T ss_dssp EEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT--CCEEEEEECSSSCEEEEEECTTSCEE
T ss_pred EEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc--ceeeEeecccCCceEEEEECCCCCEE
Confidence 4699998877777778899999999999999999999999999999984221 12234567899999999999999999
Q ss_pred EEEeCC----CeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-
Q psy14961 81 LTGSGD----CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI- 154 (320)
Q Consensus 81 ~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~- 154 (320)
++++.+ +.|++|| ++.....+.+|...|.+++|+| ++. .|++++.|+.|++||...+++...+.+|...+
T Consensus 119 ~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p--~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~ 194 (611)
T 1nr0_A 119 AAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKP--SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH 194 (611)
T ss_dssp EEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECS--SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEE
T ss_pred EEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECC--CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceE
Confidence 998865 4778887 4566778899999999999866 454 69999999999999999888888887776533
Q ss_pred --------------cCCCeEEEEECcCCeeeeeec-------CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961 155 --------------TDDKLVNIWDMRTGYCVQSFE-------GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV 213 (320)
Q Consensus 155 --------------~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~ 213 (320)
+.|+.|++||++++++...+. +|...|.+++|+|+|++|++++.|++|++||+.+++.+
T Consensus 195 ~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 195 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 368999999999998887774 79999999999999999999999999999999988876
Q ss_pred eEEecCcce-eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 214 ACYKKDSIL-FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 214 ~~~~~~~~~-~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
..+...... .....+.| ++..+++++.|+.+++||.........+.+|...|++++|+|||++|++|+.|++|++|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 275 KTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeecCCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 655432111 11233444 788999999999999999988888888899999999999999999999999999999999
Q ss_pred cch
Q psy14961 293 SKN 295 (320)
Q Consensus 293 ~~~ 295 (320)
...
T Consensus 353 ~~~ 355 (611)
T 1nr0_A 353 IST 355 (611)
T ss_dssp TTT
T ss_pred CCC
Confidence 653
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-40 Score=286.98 Aligned_cols=278 Identities=20% Similarity=0.315 Sum_probs=212.5
Q ss_pred eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-c-ccccCeEEEEecCCCCEEEEEeCCC
Q psy14961 10 TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-A-THTSFISCCIFPNSDQQILTGSGDC 87 (320)
Q Consensus 10 ~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~l~s~~~dg 87 (320)
+....+..|...|++++|+|+ +|++|+.|+.|++|++..... .....+ . .|...|.++.|++++++|++|+.|+
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC--EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe--EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 445567789999999999988 999999999999999853221 122233 3 3999999999999999999999999
Q ss_pred eEEEEECCC-------cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC----cEEEEeccCCccc--
Q psy14961 88 TCALWDVES-------SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG----YCVQSFEGHHNLI-- 154 (320)
Q Consensus 88 ~v~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~----~~~~~~~~~~~~~-- 154 (320)
+|++||++. .+++..+.+|...|.+++|+| ++++|++|+.|+.|++||++.. +++..+.+|...+
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp--~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECT--TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC--CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 999999853 345667889999999998855 6899999999999999999432 4555666654322
Q ss_pred -------------cCCCeEEEEECcCC--eeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCe------
Q psy14961 155 -------------TDDKLVNIWDMRTG--YCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADK------ 211 (320)
Q Consensus 155 -------------~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~------ 211 (320)
+.|+.|++||.+++ +++..+.+|...|.+++|+|+ +..|++++.|++|++||++.+.
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~ 238 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE 238 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccce
Confidence 35899999999876 678889999999999999998 6789999999999999986431
Q ss_pred --eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe--EEE-EeecCCC-ceeEEEECc--CCCeEEEec
Q psy14961 212 --EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC--RVN-HLMGHEN-RVSCLQVSP--DGTAFSSGS 283 (320)
Q Consensus 212 --~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~--~~~-~~~~h~~-~i~~i~~s~--~~~~l~s~s 283 (320)
....+.. .....+.+++|++++ +|++|+.||.|++||...+. ... .+.+|.. .|++++|+| ++++|||||
T Consensus 239 ~~~~~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 239 WVCEAILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred eEEeeeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 1111211 011246789999665 89999999999999977653 232 2357887 899999999 789999999
Q ss_pred CCCceEeeecch
Q psy14961 284 WDTTLRDEESKN 295 (320)
Q Consensus 284 ~D~~ir~~~~~~ 295 (320)
.|++|++|+.+.
T Consensus 317 ~Dg~v~~W~~~~ 328 (330)
T 2hes_X 317 DDGIVNFWSLEK 328 (330)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCcEEEEEecc
Confidence 999999999754
No 19
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.3e-39 Score=308.43 Aligned_cols=276 Identities=23% Similarity=0.372 Sum_probs=228.3
Q ss_pred EEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961 13 HSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA 90 (320)
Q Consensus 13 ~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 90 (320)
..+..|...|++++|+|++ .+|++|+.|++|++|++...... ......+.+|...|.++.|++++++|++|+.||+|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 3466899999999999865 69999999999999998643221 123346778999999999999999999999999999
Q ss_pred EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe---ccCCc---------------
Q psy14961 91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF---EGHHN--------------- 152 (320)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~---~~~~~--------------- 152 (320)
+||+.++..+..+.+|...|.++++++ +++.|++++.|+.|++||+......... .+|..
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSL--DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECT--TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeC--CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 999999999999999999999988854 6889999999999999998654322211 11111
Q ss_pred c--ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEE
Q psy14961 153 L--ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDF 230 (320)
Q Consensus 153 ~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 230 (320)
+ .+.|+.|++||++++++...+.+|...|.+++|+|+|++|++|+.||+|++||+++++.+..+.... .+.+++|
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~ 610 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS---VIHALCF 610 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS---CEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC---cEEEEEE
Confidence 1 2468999999999999999999999999999999999999999999999999999988766554432 3578999
Q ss_pred ecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-------------------CceeEEEECcCCCeEEEecCCCceEee
Q psy14961 231 SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE-------------------NRVSCLQVSPDGTAFSSGSWDTTLRDE 291 (320)
Q Consensus 231 s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~-------------------~~i~~i~~s~~~~~l~s~s~D~~ir~~ 291 (320)
+|++.+|++++ ++.|++||+.+...+..+..|. ..+++++|||||++|+|||.|++||+|
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence 99999888876 5569999999887776554321 237899999999999999999999999
Q ss_pred ecc
Q psy14961 292 ESK 294 (320)
Q Consensus 292 ~~~ 294 (320)
+..
T Consensus 690 ~i~ 692 (694)
T 3dm0_A 690 GIG 692 (694)
T ss_dssp EC-
T ss_pred ecc
Confidence 974
No 20
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-39 Score=286.82 Aligned_cols=290 Identities=14% Similarity=0.237 Sum_probs=237.0
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEe----cccCC------ccccccccc------cc
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAI----ALEDD------SSAKKKTVA------TH 64 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~----~~~~~------~~~~~~~~~------~h 64 (320)
.+|+............|...|.+++|+|+++ +|++|+.||.|++|++ ..... .......+. .|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (425)
T 1r5m_A 28 SSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKT 107 (425)
T ss_dssp ------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------
T ss_pred ccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCC
Confidence 3677776666555566778999999999999 9999999999999998 43221 111111122 26
Q ss_pred ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961 65 TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV 144 (320)
Q Consensus 65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~ 144 (320)
...|.++.|++++++|++++.||.|++|| .+++.+..+..|...|.++++.| +++.|++++.|+.|++||+.+++.+
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK--DGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT--TSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC--CCCEEEEEecCCeEEEEECCCCcEE
Confidence 77999999999999999999999999999 56778888889999999988854 6889999999999999999998887
Q ss_pred EEeccCCcc-----------------------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE
Q psy14961 145 QSFEGHHNL-----------------------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT 195 (320)
Q Consensus 145 ~~~~~~~~~-----------------------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s 195 (320)
..+..+... ...++.|++||++++++...+.+|...|.+++|+|++++|++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE
Confidence 766544322 135788999999999999899999999999999999999999
Q ss_pred eeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcC
Q psy14961 196 GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPD 275 (320)
Q Consensus 196 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~ 275 (320)
++.|+.|++||++.++....+..+.. .+..+.|+|++ ++++++.|+.|++||+.+...+..+..|...|.+++|+|+
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCFYGHSQ--SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEECCCSS--CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT
T ss_pred EcCCCEEEEEECCCCccceEecCCCc--cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC
Confidence 99999999999998776665543322 46789999999 9999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCceEeeecchHh
Q psy14961 276 GTAFSSGSWDTTLRDEESKNRY 297 (320)
Q Consensus 276 ~~~l~s~s~D~~ir~~~~~~~~ 297 (320)
+++|++++.|+.|++|+..+.-
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp SSEEEEEETTSCEEEEECHHHH
T ss_pred CCEEEEEECCCeEEEEECCCCc
Confidence 9999999999999999976543
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.5e-39 Score=297.71 Aligned_cols=280 Identities=28% Similarity=0.473 Sum_probs=235.1
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|++||.. .+....+..|...|.+++|+|+++.|++++.|+.+++|+... .....+.+|...|.++.|+++++.+
T Consensus 245 i~~w~~~-~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l 318 (577)
T 2ymu_A 245 VKLWNRN-GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVWGVAFSPDGQTI 318 (577)
T ss_dssp EEEECTT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-----CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEeCC-CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-----cEEEEEecCCCCeEEEEECCCCCEE
Confidence 4689954 455556677889999999999999999999999999998632 2344567899999999999999999
Q ss_pred EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------ 154 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------ 154 (320)
++++.|++|++||.... .+..+.+|...+.++++. ++++.|++++.|+.+++||. +++.+..+.+|...+
T Consensus 319 ~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s--~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s 394 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFS--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS 394 (577)
T ss_dssp EEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEEC--TTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEEC
T ss_pred EEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEEC--CCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEEC
Confidence 99999999999998654 456678899999888774 56899999999999999996 456666665554322
Q ss_pred ---------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961 155 ---------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA 225 (320)
Q Consensus 155 ---------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 225 (320)
..|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||... +.+..+..+.. .+
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~--~v 470 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQTLTGHSS--SV 470 (577)
T ss_dssp TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEEEECCSS--CE
T ss_pred CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEEEcCCCC--CE
Confidence 35889999995 6678888999999999999999999999999999999999754 44444443332 46
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++|+|+|||++||+++.|++|++|+...
T Consensus 471 ~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 471 RGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 78999999999999999999999995 5678888999999999999999999999999999999999643
No 22
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-38 Score=277.16 Aligned_cols=279 Identities=19% Similarity=0.280 Sum_probs=238.4
Q ss_pred eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961 11 KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA 90 (320)
Q Consensus 11 ~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 90 (320)
....+..|...|++++|+|++++|++|+.||.|++|++.. ......+..|...|.++.|++++++|++++.||.|+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLN----GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCC----chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 3345677899999999999999999999999999999753 233456778999999999999999999999999999
Q ss_pred EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC-----CeEEEEeCCCCcE-----------EEEeccCC---
Q psy14961 91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD-----KLVNIWDMRTGYC-----------VQSFEGHH--- 151 (320)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d-----g~i~lwd~~~~~~-----------~~~~~~~~--- 151 (320)
+||+.+++.+..+. +...+.++++. ++++.+++++.+ +.|++||+..+.. +..+..+.
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFS--PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEEC--TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEc--cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 99999999888877 78889888775 468899999999 9999999865431 11111111
Q ss_pred -----------c---cccCCCeEEEEECcC-CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961 152 -----------N---LITDDKLVNIWDMRT-GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY 216 (320)
Q Consensus 152 -----------~---~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~ 216 (320)
. ....++.|++||+++ ......+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 1 124689999999998 7888899999999999999999999999999999999999998877766
Q ss_pred ecCcceeeeEEEEEecCCcEEEEEeCCC--------------eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEe
Q psy14961 217 KKDSILFGATSVDFSVSGRLLFAGYNDY--------------TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSG 282 (320)
Q Consensus 217 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg--------------~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~ 282 (320)
.... .+..+.|+|++.++++++.++ .+++||......+..+.+|...|++++|+|++++|+++
T Consensus 257 ~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 333 (369)
T 3zwl_B 257 ETDC---PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASG 333 (369)
T ss_dssp ECSS---CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cCCC---CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEE
Confidence 6432 357889999999999999888 89999999999999999999999999999999999999
Q ss_pred cCCCceEeeecchHhhh
Q psy14961 283 SWDTTLRDEESKNRYVQ 299 (320)
Q Consensus 283 s~D~~ir~~~~~~~~~~ 299 (320)
+.|++|++|+..+....
T Consensus 334 ~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 334 GEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp ETTSEEEEEEECHHHHT
T ss_pred cCCCeEEEEECccccch
Confidence 99999999998776544
No 23
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.5e-39 Score=277.35 Aligned_cols=235 Identities=26% Similarity=0.354 Sum_probs=205.2
Q ss_pred cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
..++.+|...|.++.|+|++++|++|+.||+|++||++++..+..+..|..++.++++.+ ++++|++|+.|+.|++||
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA--RKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG--GGTEEEEEETTSEEEEEE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC--CCCEEEEECCCCEEEEEE
Confidence 346778999999999999999999999999999999999999999999999999998866 578999999999999999
Q ss_pred CCCCcEEEEeccCCccc---------------cCCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCC
Q psy14961 138 MRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDA 200 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg 200 (320)
+.+++.+..+.+|...+ +.|+.|++||++++ .+...+.+|...|.+++|+| ++..|++|+.|+
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 99999988887776543 36899999999887 55677899999999999999 578999999999
Q ss_pred eEEEEECCCCeeEeEEecCcceeeeEEEEEec--CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCe
Q psy14961 201 TCRLFDLRADKEVACYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA 278 (320)
Q Consensus 201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~ 278 (320)
+|++||++............. ..+..+.|+| ++.+|++|+.|++|++||+.++..+.++.+|...|.+++|+|++++
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 242 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI 242 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCT-TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred eEEEEECCCCCccceeccCCc-CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE
Confidence 999999987665443332211 1345667765 7889999999999999999999999999999999999999999999
Q ss_pred EEEecCCCceEeeecch
Q psy14961 279 FSSGSWDTTLRDEESKN 295 (320)
Q Consensus 279 l~s~s~D~~ir~~~~~~ 295 (320)
|+|||.|++||+|+...
T Consensus 243 l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 243 IISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEETTSCEEEEETTT
T ss_pred EEEEcCCCeEEEEECCC
Confidence 99999999999999754
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.9e-39 Score=278.05 Aligned_cols=250 Identities=15% Similarity=0.185 Sum_probs=202.6
Q ss_pred EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEEEEE
Q psy14961 16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCALWD 93 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iwd 93 (320)
..|...|.+++|+|+|++|++|+.|+.|++|++... .......+.+|...|.++.|+++ ++.|++|+.|++|++||
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~--~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE--THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS--CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC--CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 458889999999999999999999999999998532 22344577899999999999753 78999999999999999
Q ss_pred CCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961 94 VESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV 171 (320)
Q Consensus 94 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 171 (320)
+++++ .+..+..|...|.+++|+|...+..|++++.|+.|++||++.+... ..
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-------------------------~~ 138 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-------------------------SP 138 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-------------------------CC
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-------------------------ee
Confidence 98764 4556778999999999987655789999999999999998754210 01
Q ss_pred eeecCCCCCeEEEEEcCC-------------CCEEEEeeCCCeEEEEECCCCe----eEeEEecCcceeeeEEEEEecCC
Q psy14961 172 QSFEGHQSDVNSVKFHPS-------------GDAVATGSDDATCRLFDLRADK----EVACYKKDSILFGATSVDFSVSG 234 (320)
Q Consensus 172 ~~~~~~~~~v~~v~~~p~-------------g~~l~s~s~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~s~~~ 234 (320)
..+.+|...|.+++|+|+ +++|++|+.|++|++||+++++ ....+..+. ..+.+++|+|++
T Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~--~~V~~v~~sp~~ 216 (297)
T 2pm7_B 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTV 216 (297)
T ss_dssp EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCC
T ss_pred eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC--CceEEEEECCCC
Confidence 234578889999999997 5689999999999999998654 222333222 246889999985
Q ss_pred ---cEEEEEeCCCeEEEEcCCCCe---EEEEe--ecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 235 ---RLLFAGYNDYTINVWDSLKCC---RVNHL--MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 235 ---~~l~~g~~dg~v~~wd~~~~~---~~~~~--~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.+|++|+.|++|++||..... ....+ .+|...|.+++|+|+|++||+++.|++|++|+..
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 899999999999999976532 11222 4688899999999999999999999999999964
No 25
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-40 Score=296.46 Aligned_cols=291 Identities=14% Similarity=0.215 Sum_probs=235.3
Q ss_pred CeEeecccceeE--EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC-C
Q psy14961 1 MIIWDGLTQTKE--HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-D 77 (320)
Q Consensus 1 ~~~W~~~~~~~~--~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~ 77 (320)
|+|||..++... .....+...|.+++|+|++++|++|+.||.|++|++............+..|...|.++.|+++ +
T Consensus 47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 126 (416)
T 2pm9_A 47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQD 126 (416)
T ss_dssp CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSST
T ss_pred EEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCC
Confidence 579999877522 2223467889999999999999999999999999986422222345567789999999999998 8
Q ss_pred CEEEEEeCCCeEEEEECCCcc------ee---eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961 78 QQILTGSGDCTCALWDVESSQ------LL---QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE 148 (320)
Q Consensus 78 ~~l~s~~~dg~v~iwd~~~~~------~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~ 148 (320)
.+|++++.|+.|++||+.+++ .. ..+..|...+.++++.+. .+..|++++.|+.|++||+++++.+..+.
T Consensus 127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQS-LAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSS-CTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCC-CCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 899999999999999998876 22 234678899999988653 15799999999999999999988777665
Q ss_pred cC------Ccc----------------ccCCC---eEEEEECcCC-eeeeeec-CCCCCeEEEEEcC-CCCEEEEeeCCC
Q psy14961 149 GH------HNL----------------ITDDK---LVNIWDMRTG-YCVQSFE-GHQSDVNSVKFHP-SGDAVATGSDDA 200 (320)
Q Consensus 149 ~~------~~~----------------~~~d~---~i~iwd~~~~-~~~~~~~-~~~~~v~~v~~~p-~g~~l~s~s~dg 200 (320)
.+ ... ...++ .|++||++++ .+...+. +|...|.+++|+| ++++|++++.|+
T Consensus 206 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg 285 (416)
T 2pm9_A 206 YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN 285 (416)
T ss_dssp CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS
T ss_pred ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC
Confidence 43 111 12456 9999999986 6777787 8999999999999 899999999999
Q ss_pred eEEEEECCCCeeEeEEecCcceeeeEEEEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEee------------------
Q psy14961 201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHLM------------------ 261 (320)
Q Consensus 201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~~------------------ 261 (320)
.|++||+++++.+..+..+.. .+.+++|+|++ .+|++++.|+.|++||+..........
T Consensus 286 ~v~~wd~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (416)
T 2pm9_A 286 TVLLWNPESAEQLSQFPARGN--WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVS 363 (416)
T ss_dssp EEEEECSSSCCEEEEEECSSS--CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------------------
T ss_pred CEEEeeCCCCccceeecCCCC--ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccc
Confidence 999999999888777665432 35688999999 899999999999999987654322111
Q ss_pred -----------------cCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 262 -----------------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 262 -----------------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.|..++.+++|+|||++|++++.|++|++|+..
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 364 REESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp ---CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred ccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 167788999999999999999999999999964
No 26
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-39 Score=286.14 Aligned_cols=283 Identities=17% Similarity=0.207 Sum_probs=235.8
Q ss_pred CeEeec----ccce------eEEEEEe----------CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc
Q psy14961 1 MIIWDG----LTQT------KEHSVTM----------PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT 60 (320)
Q Consensus 1 ~~~W~~----~~~~------~~~~~~~----------~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~ 60 (320)
|++||. .+++ ....+.. |...|.+++|+|++++|++|+.||.|++|+.. ......
T Consensus 70 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-----~~~~~~ 144 (425)
T 1r5m_A 70 ARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-----GALLNV 144 (425)
T ss_dssp EEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEETT-----SCEEEE
T ss_pred EEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-----CCeeee
Confidence 468999 7666 3333333 46689999999999999999999999999832 233456
Q ss_pred ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc---------------eeEEEEeeCCCCCEEE
Q psy14961 61 VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE---------------LMDLDLAPSETGNTFV 125 (320)
Q Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~~l~ 125 (320)
+..|...|.++.|+++++.|++++.|+.|++||+.+++.+..+..+... +.++.+.+. ..++
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 221 (425)
T 1r5m_A 145 LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD---DKFV 221 (425)
T ss_dssp ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET---TEEE
T ss_pred ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC---CEEE
Confidence 6789999999999999999999999999999999999888888777666 788888763 5799
Q ss_pred EEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC
Q psy14961 126 SGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG 190 (320)
Q Consensus 126 s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g 190 (320)
+++.|+.|++||++++..+..+..|...+ ..++.|++||++++++...+.+|...|.+++|+|++
T Consensus 222 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 222 IPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD 301 (425)
T ss_dssp EECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT
T ss_pred EEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC
Confidence 99999999999999887666665444322 358899999999999999999999999999999999
Q ss_pred CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe---------------
Q psy14961 191 DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC--------------- 255 (320)
Q Consensus 191 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~--------------- 255 (320)
.+++++.|+.|++||+++++.+..+..+.. .+..++|+|++++|++|+.||.|++||+.+..
T Consensus 302 -~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 378 (425)
T 1r5m_A 302 -KVISCSMDGSVRLWSLKQNTLLALSIVDGV--PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN 378 (425)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEECTTC--CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------
T ss_pred -EEEEEeCCCcEEEEECCCCcEeEecccCCc--cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccC
Confidence 999999999999999999887766654332 46789999999999999999999999988777
Q ss_pred -----EEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 256 -----RVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 256 -----~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.+..+.+|.. .|++++|+|++++|++++.|++|++|+.+
T Consensus 379 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 379 PLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 7888889976 99999999999999999999999999964
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.3e-38 Score=271.73 Aligned_cols=282 Identities=18% Similarity=0.304 Sum_probs=232.2
Q ss_pred EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc--cccccCeEEEEecCCCCEE
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV--ATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l 80 (320)
+|+............|...|.+++|+|++++|++++ ||.|++|++...... .....+ ..|...|.++.|+++++.+
T Consensus 35 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l 112 (337)
T 1gxr_A 35 GPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-SPVSQLDCLNRDNYIRSCKLLPDGCTL 112 (337)
T ss_dssp STTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-SCSEEEECSCTTSBEEEEEECTTSSEE
T ss_pred ccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce-eeeecccccCCCCcEEEEEEcCCCCEE
Confidence 344444444444456888999999999999999999 999999998643221 112222 2688999999999999999
Q ss_pred EEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc----
Q psy14961 81 LTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---- 154 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---- 154 (320)
++++.|+.|++||+.+++ ....+..|...+.++++.+ +++.+++++.|+.|++||+++++.+..+..|...+
T Consensus 113 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~ 190 (337)
T 1gxr_A 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP--DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190 (337)
T ss_dssp EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC--CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEE
Confidence 999999999999998876 5566778888898888754 68899999999999999999998887776654322
Q ss_pred -----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961 155 -----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF 223 (320)
Q Consensus 155 -----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 223 (320)
+.++.|++||++++++...+. |...+.+++|+|+++++++++.|+.|++||++.++......+. .
T Consensus 191 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~ 266 (337)
T 1gxr_A 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE---S 266 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCS---S
T ss_pred ECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCc---c
Confidence 358899999999998887764 7788999999999999999999999999999987654322222 2
Q ss_pred eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.+..++|+|++++|++++.||.|++||..++..+. ...|...|.+++|+|++++|++++.|+.|++|+.
T Consensus 267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF-QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE-EecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 46789999999999999999999999998877764 4568899999999999999999999999999985
No 28
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-39 Score=288.56 Aligned_cols=288 Identities=12% Similarity=0.160 Sum_probs=227.5
Q ss_pred EeecccceeEEEE-EeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCccccc-ccccccccCeEEEEecCCCCE
Q psy14961 3 IWDGLTQTKEHSV-TMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKK-KTVATHTSFISCCIFPNSDQQ 79 (320)
Q Consensus 3 ~W~~~~~~~~~~~-~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~ 79 (320)
.|+ .+++....+ ..|...|++++|+| ++++|++|+.||.|++||+.......... .....|...|.++.|+++++.
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSE
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCE
Confidence 466 345555666 56789999999999 99999999999999999986411111111 112258999999999999999
Q ss_pred EEEEeCCCeEEEEECC---Ccceeeecc----------c--CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961 80 ILTGSGDCTCALWDVE---SSQLLQSFH----------G--HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV 144 (320)
Q Consensus 80 l~s~~~dg~v~iwd~~---~~~~~~~~~----------~--~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~ 144 (320)
|++|+.||.|++||++ +++.+..+. . +...+.++.+.+.+++..|++++.|+.|++||+++++++
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 9999999999999984 444333222 1 445566666666778899999999999999999999988
Q ss_pred EEecc--CCccc---------------cCCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcC----CCCEEEEeeCCCeE
Q psy14961 145 QSFEG--HHNLI---------------TDDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHP----SGDAVATGSDDATC 202 (320)
Q Consensus 145 ~~~~~--~~~~~---------------~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p----~g~~l~s~s~dg~i 202 (320)
..+.. |...+ +.|+.|++||+++++++..+. +|..+|.+++|+| ++.+|++++.||.|
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 88776 33322 358899999999999998876 7888999996665 57799999999999
Q ss_pred EEEECCCCeeEeEEecCc------------------------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE
Q psy14961 203 RLFDLRADKEVACYKKDS------------------------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN 258 (320)
Q Consensus 203 ~iwd~~~~~~~~~~~~~~------------------------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~ 258 (320)
++||+++++.+..+..+. ....+.+++|+ ++.+|++|+.|+.|++||+.++....
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 999999888766655321 11125678899 78999999999999999998876665
Q ss_pred Eeec-------------------------------------CCCceeEEEECcC--CCeEEEecCCCceEeee
Q psy14961 259 HLMG-------------------------------------HENRVSCLQVSPD--GTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 259 ~~~~-------------------------------------h~~~i~~i~~s~~--~~~l~s~s~D~~ir~~~ 292 (320)
.+.+ |.+.|++|+|+++ +.+|+||+.||+|++|+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 5554 8999999999998 88999999999999995
No 29
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-38 Score=283.35 Aligned_cols=233 Identities=27% Similarity=0.506 Sum_probs=209.9
Q ss_pred ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961 59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138 (320)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~ 138 (320)
..+.+|...|.++.|+++++.+++|+.||+|++||+.+++....+.+|...|.+++|++ ++++|++|+.|+.|++||+
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~--~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH--SGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT--TSSEEEEEETTSCCCEEET
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC--CCCEEEEEeCCCeEEEEeC
Confidence 35678999999999999999999999999999999999999999999999999998854 6889999999999999999
Q ss_pred CCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEE
Q psy14961 139 RTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCR 203 (320)
Q Consensus 139 ~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~ 203 (320)
.+++++..+.+|...+ +.|+.|++||++++.++..+.+|...|.+++++|++.++++|+.|++|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 9998888777665432 3689999999999999999999999999999999999999999999999
Q ss_pred EEECCCCeeEeEEecCcceeeeEEEEEecC--------------------CcEEEEEeCCCeEEEEcCCCCeEEEEeecC
Q psy14961 204 LFDLRADKEVACYKKDSILFGATSVDFSVS--------------------GRLLFAGYNDYTINVWDSLKCCRVNHLMGH 263 (320)
Q Consensus 204 iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~--------------------~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h 263 (320)
+||+++++....+..+.. .+.+++|+|+ +.+|++|+.|++|++||+.++..+..+.+|
T Consensus 260 vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 260 VWVVATKECKAELREHRH--VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEETTTCCEEEEECCCSS--CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEECCCCceeeEecCCCc--eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 999998877665544432 3578889986 678999999999999999999999999999
Q ss_pred CCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 264 ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 264 ~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
.+.|++++|+|++++|++||.|++||+|+..+
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999999999999999999999999754
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.5e-39 Score=278.93 Aligned_cols=252 Identities=15% Similarity=0.142 Sum_probs=200.6
Q ss_pred EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCCEEEEEeCCCeEEEEE
Q psy14961 16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQQILTGSGDCTCALWD 93 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd 93 (320)
..|...|++++|+|+|++|++|+.|++|++||+... .......+.+|...|.++.|++ +++.|++|+.|++|++||
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~--~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG--GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETT--EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC--CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 468889999999999999999999999999998532 1123456789999999999965 378999999999999999
Q ss_pred CCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961 94 VESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV 171 (320)
Q Consensus 94 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 171 (320)
++++. ....+.+|...|.+++|+|..++.+|++|+.|+.|++||++.+... ...
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~------------------------~~~ 143 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW------------------------EVK 143 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE------------------------EEC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc------------------------cee
Confidence 98763 5566788999999999987656889999999999999998754211 012
Q ss_pred eeecCCCCCeEEEEEcCC-----------------CCEEEEeeCCCeEEEEECCCCe---eEeEEecCcceeeeEEEEEe
Q psy14961 172 QSFEGHQSDVNSVKFHPS-----------------GDAVATGSDDATCRLFDLRADK---EVACYKKDSILFGATSVDFS 231 (320)
Q Consensus 172 ~~~~~~~~~v~~v~~~p~-----------------g~~l~s~s~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~s 231 (320)
..+.+|...|.+++|+|+ +++|++|+.|++|++||++... .+..+..+. ..+.+++|+
T Consensus 144 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~--~~V~~v~~s 221 (316)
T 3bg1_A 144 KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS--DWVRDVAWA 221 (316)
T ss_dssp CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS--SCEEEEECC
T ss_pred eeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC--CceEEEEec
Confidence 234568888899999987 4689999999999999997542 333333222 246789999
Q ss_pred cCC----cEEEEEeCCCeEEEEcCCCC---e-EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 232 VSG----RLLFAGYNDYTINVWDSLKC---C-RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 232 ~~~----~~l~~g~~dg~v~~wd~~~~---~-~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
|++ .+|++|+.|++|++||.... . ....+.+|.+.|.+++|+|++++||+|+.|++|++|+...
T Consensus 222 p~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 222 PSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred CCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 987 89999999999999997652 1 2234567899999999999999999999999999999653
No 31
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4e-38 Score=279.74 Aligned_cols=278 Identities=17% Similarity=0.179 Sum_probs=231.2
Q ss_pred EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC--cccccccccccccCeEEEEecCC----C---CEEEEEeC
Q psy14961 15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIFPNS----D---QQILTGSG 85 (320)
Q Consensus 15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~----~---~~l~s~~~ 85 (320)
+..|...|++++|+| ++|++|+.||.|++|++..... .......+..|...|.++.|+++ + .+|++++.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 446889999999999 7999999999999999864321 11234566789999999999988 8 89999999
Q ss_pred CCeEEEEECCCcce-----eeecccC-----ccceeEEEEeeC--CCCCE-EEEEeCCCeEEEEeCCC------CcEEE-
Q psy14961 86 DCTCALWDVESSQL-----LQSFHGH-----TGELMDLDLAPS--ETGNT-FVSGSSDKLVNIWDMRT------GYCVQ- 145 (320)
Q Consensus 86 dg~v~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~~~--~~~~~-l~s~~~dg~i~lwd~~~------~~~~~- 145 (320)
||.|++||+.+++. +..+..| ...|.++++.+. ++++. |++++.||.|++||++. +..+.
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence 99999999988876 7778888 588999998732 46889 99999999999999987 54433
Q ss_pred ----Eecc-------CCc-----------c---ccCCCeEEEEECcCCeeeeeecC---C---CCCeEEEEEcCCCCEEE
Q psy14961 146 ----SFEG-------HHN-----------L---ITDDKLVNIWDMRTGYCVQSFEG---H---QSDVNSVKFHPSGDAVA 194 (320)
Q Consensus 146 ----~~~~-------~~~-----------~---~~~d~~i~iwd~~~~~~~~~~~~---~---~~~v~~v~~~p~g~~l~ 194 (320)
.+.+ +.. . ...++.|++||+++++++..+.. | ...|.+++|+|++++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~ 249 (397)
T 1sq9_A 170 SPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA 249 (397)
T ss_dssp CCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE
T ss_pred cCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEE
Confidence 3321 111 1 13578999999999999999998 9 99999999999999999
Q ss_pred EeeCC---CeEEEEECCCCeeEeEEecCc-----------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961 195 TGSDD---ATCRLFDLRADKEVACYKKDS-----------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL 260 (320)
Q Consensus 195 s~s~d---g~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~ 260 (320)
+++.| +.|++||+++++.+..+.... ....+.+++|+|++.+|++|+.||.|++||+.+...+..+
T Consensus 250 ~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 250 IAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 99999 999999999888776665410 1124678999999999999999999999999999999989
Q ss_pred e------cC---------------CCceeEEEECcCC----------CeEEEecCCCceEeeecc
Q psy14961 261 M------GH---------------ENRVSCLQVSPDG----------TAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 261 ~------~h---------------~~~i~~i~~s~~~----------~~l~s~s~D~~ir~~~~~ 294 (320)
. +| ..+|++++|+|++ ++|++|+.|+.|++|+..
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 330 NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp ECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 8 88 9999999999998 799999999999999974
No 32
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=273.49 Aligned_cols=276 Identities=20% Similarity=0.281 Sum_probs=221.9
Q ss_pred EeCccceEEEEEcCCCCEE-EEecC---CCeEEEEEecccCCcccccccccccccCeEEEEecCC---CCEEEEEeCCCe
Q psy14961 16 TMPATWVMACAYAPSGSVV-ASGGL---DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS---DQQILTGSGDCT 88 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l-~s~~~---dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~ 88 (320)
..|...|.+++|+|++..+ ++|+. |+.|++|++.... ........|...|.++.|+++ +.++++|+.||.
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD---LKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS---EEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc---ccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 4588999999999999655 56665 8999999986322 111223378899999999988 689999999999
Q ss_pred EEEEECCCcc-eeeecccCccceeEEEEee----CCCCCEEEEEeCCCeEEEEeCCCCc-EEEEeccCCc----------
Q psy14961 89 CALWDVESSQ-LLQSFHGHTGELMDLDLAP----SETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHN---------- 152 (320)
Q Consensus 89 v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~----~~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~~~~~---------- 152 (320)
|++||+.+++ .+..+.+|...|.++.+.+ +++++.|++++.|+.|++||++++. .+..+..+..
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 9999999887 8888899999999998753 6788999999999999999998875 4444432211
Q ss_pred ----------c---ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC---CCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961 153 ----------L---ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP---SGDAVATGSDDATCRLFDLRADKEVACY 216 (320)
Q Consensus 153 ----------~---~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p---~g~~l~s~s~dg~i~iwd~~~~~~~~~~ 216 (320)
. ...++.|++||+++++.... ..|...|.+++|+| ++.+|++++.||.|++||+++++....+
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 1 13578999999999887544 56889999999999 8999999999999999999876543333
Q ss_pred e---cCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCC-------------------eEEEEeecCCCceeEEEEC
Q psy14961 217 K---KDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLKC-------------------CRVNHLMGHENRVSCLQVS 273 (320)
Q Consensus 217 ~---~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~-------------------~~~~~~~~h~~~i~~i~~s 273 (320)
. .......+.+++|+|++. +|++|+.||.|++||+... ..+..+.+|..+|++++|+
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s 330 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWS 330 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEEC
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEc
Confidence 2 001122467899999999 8999999999999997532 4567788999999999999
Q ss_pred cCCCeEE-EecCCCceEeeecch
Q psy14961 274 PDGTAFS-SGSWDTTLRDEESKN 295 (320)
Q Consensus 274 ~~~~~l~-s~s~D~~ir~~~~~~ 295 (320)
|++++|+ +++.|++|++|+..+
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCCeEEEEecCCCcEEEEECCC
Confidence 9999998 899999999999754
No 33
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.6e-38 Score=278.55 Aligned_cols=283 Identities=15% Similarity=0.184 Sum_probs=220.3
Q ss_pred EeecccceeEEEEEeCccceEEEEEcCCC-CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEE
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMACAYAPSG-SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQI 80 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l 80 (320)
+|+..+.+....+..|...|.+++|+|++ ++|++|+.||.|++|++..... .......+|...|.++.|++ ++..|
T Consensus 57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l 134 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK--TSFIQGMGPGDAITGMKFNQFNTNQL 134 (383)
T ss_dssp HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC--EEEECCCSTTCBEEEEEEETTEEEEE
T ss_pred cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc--ceeeecCCcCCceeEEEeCCCCCCEE
Confidence 34445555556667788999999999999 9999999999999999863221 12222346999999999998 67899
Q ss_pred EEEeCCCeEEEEECCCcceeeeccc---CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHG---HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI--- 154 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~--- 154 (320)
++++.|+.|++||+.+ ..+..+.. |...+.++++++ +++.|++++.|+.|++||++ +..+..+.+|...+
T Consensus 135 ~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV--SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET--TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEE
T ss_pred EEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC--CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEE
Confidence 9999999999999986 44444433 347788888865 57899999999999999994 55665555443221
Q ss_pred -------------cCCCeEEEEECcC----CeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961 155 -------------TDDKLVNIWDMRT----GYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVACY 216 (320)
Q Consensus 155 -------------~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~~~ 216 (320)
+.|+.|++||+++ +.++..+ +|...|.+++|+| ++.+|++++.|+.|++||+++++....+
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 3588999999988 5566655 6999999999999 9999999999999999999876654433
Q ss_pred ecCcce---------------eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec--CCCceeEEEECcCCCeE
Q psy14961 217 KKDSIL---------------FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG--HENRVSCLQVSPDGTAF 279 (320)
Q Consensus 217 ~~~~~~---------------~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~--h~~~i~~i~~s~~~~~l 279 (320)
..+... .....+.|+|++++ +|+.|+.|++||+.++..+..+.+ |...+..++|+|++++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l 367 (383)
T 3ei3_B 290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVL 367 (383)
T ss_dssp EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEE
T ss_pred ccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEE
Confidence 321100 11233566677766 777899999999999988888876 56788888999999999
Q ss_pred EEecCCCceEeeecch
Q psy14961 280 SSGSWDTTLRDEESKN 295 (320)
Q Consensus 280 ~s~s~D~~ir~~~~~~ 295 (320)
++|+ |++|++|+..+
T Consensus 368 ~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 368 ASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEE-TTEEEEEECC-
T ss_pred EEec-CCcEEEEecCC
Confidence 9997 99999999764
No 34
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-37 Score=270.64 Aligned_cols=245 Identities=36% Similarity=0.734 Sum_probs=210.9
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|+|||..+++....+..|...|.+++|+|++++|++|+.|+.+++|++............+.+|...|.++.|.+++ .+
T Consensus 79 v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l 157 (340)
T 1got_B 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QI 157 (340)
T ss_dssp EEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EE
T ss_pred EEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cE
Confidence 57999999998888888999999999999999999999999999999864332223345677899999999998755 69
Q ss_pred EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------ 154 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------ 154 (320)
++++.|++|++||+++++.+..+.+|.+.|.+++++| ++.+|++|+.|+.|++||++++.++..+.+|...+
T Consensus 158 ~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP--DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF 235 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred EEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC--CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc
Confidence 9999999999999999999999999999999988855 68899999999999999999999888887765432
Q ss_pred ---------cCCCeEEEEECcCCeeeeeecC--CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961 155 ---------TDDKLVNIWDMRTGYCVQSFEG--HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF 223 (320)
Q Consensus 155 ---------~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 223 (320)
+.|+.|++||+++++.+..+.. +...|.+++|+|+|++|++|+.|+.|++||+.+++.+..+..+..
T Consensus 236 p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~-- 313 (340)
T 1got_B 236 PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN-- 313 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC--
Confidence 3589999999999887766642 345799999999999999999999999999998887766655443
Q ss_pred eeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961 224 GATSVDFSVSGRLLFAGYNDYTINVWD 250 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd 250 (320)
.+.+++|+|+|.+|++|+.|++|++||
T Consensus 314 ~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 467899999999999999999999997
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.1e-38 Score=280.73 Aligned_cols=287 Identities=14% Similarity=0.187 Sum_probs=230.4
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
+++||..+.+....+..+ ..+....|++++++|++|+.||.|++|++.. ......+..|...|.++.|++++++|
T Consensus 80 v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l 154 (420)
T 3vl1_A 80 DFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNF----NLQREIDQAHVSEITKLKFFPSGEAL 154 (420)
T ss_dssp EEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTS----CEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred EEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCC----cceeeecccccCccEEEEECCCCCEE
Confidence 468998877655443333 4555667899999999999999999998752 23344556899999999999999999
Q ss_pred EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc--------
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN-------- 152 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~-------- 152 (320)
++|+.|+.|++||+.+++.+..+.+|...|.+++++| +++.|++++.|+.|++||+++++.+..+..+..
T Consensus 155 ~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~ 232 (420)
T 3vl1_A 155 ISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID--RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSI 232 (420)
T ss_dssp EEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEE
T ss_pred EEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC--CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEE
Confidence 9999999999999999999899999999999998865 578999999999999999999988887764210
Q ss_pred -------------------------------cccCCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCC-EEEEeeCC
Q psy14961 153 -------------------------------LITDDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGD-AVATGSDD 199 (320)
Q Consensus 153 -------------------------------~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~-~l~s~s~d 199 (320)
....++.|++||+++++....+. +|...|.+++|+|++. +|++++.|
T Consensus 233 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 233 ALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp EEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT
T ss_pred EEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC
Confidence 01357899999999988776664 5888999999999998 99999999
Q ss_pred CeEEEEECCCCee-EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC---------eEEEEeecCCCceeE
Q psy14961 200 ATCRLFDLRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC---------CRVNHLMGHENRVSC 269 (320)
Q Consensus 200 g~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~---------~~~~~~~~h~~~i~~ 269 (320)
|.|++||+++++. +..+..+.. ..+..+ +.+++.+|++|+.|+.|++||+... .....+.+|...|.+
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~-~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 390 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEG-TPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQ 390 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTT-SCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCE
T ss_pred CeEEEEEcCCCcCchhhhhccCC-CCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEE
Confidence 9999999988643 444433211 123444 5568899999999999999996652 112335688999999
Q ss_pred EEECcCCC---eEEEecCCCceEeeecchH
Q psy14961 270 LQVSPDGT---AFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 270 i~~s~~~~---~l~s~s~D~~ir~~~~~~~ 296 (320)
++|+|+++ .|++++.++.+++|+.+++
T Consensus 391 ~~~s~~~~~~g~l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 391 FCYVSDDESNGEVLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp EEEECCSSSSCEEEEEETTTEEEEEESCC-
T ss_pred EEEccCCCCcceEEEEcCCceEEEEeccCC
Confidence 99999999 6777788899999998753
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.2e-37 Score=269.45 Aligned_cols=249 Identities=21% Similarity=0.325 Sum_probs=208.2
Q ss_pred EEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961 12 EHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL 91 (320)
Q Consensus 12 ~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 91 (320)
...+..|...|++++|+|++++|++|+.||.|++||... ......+..|...|.++.|++++..+++|+.|+.+++
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~----~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT----TNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----CCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC----CCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 345667999999999999999999999999999999742 2233455678888999999999999999999999999
Q ss_pred EECCCc------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEEC
Q psy14961 92 WDVESS------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDM 165 (320)
Q Consensus 92 wd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 165 (320)
|++... .....+..|...+.++.|.+ ++..|++++.|+.|++||+++++++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~s~D~~v~lwd~~~~~~~~-------------------- 190 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTN--SDMQILTASGDGTCALWDVESGQLLQ-------------------- 190 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCEEE--------------------
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCeEEE--------------------
Confidence 998543 23455677999999888854 57899999999999999988765443
Q ss_pred cCCeeeeeecCCCCCeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961 166 RTGYCVQSFEGHQSDVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND 243 (320)
Q Consensus 166 ~~~~~~~~~~~~~~~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 243 (320)
.+.+|...|.+++|+| +|++|++|+.||+|++||+++++.+..+..+.. .+.+++|+|++.+|++|+.|
T Consensus 191 -------~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 191 -------SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES--DVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp -------EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred -------EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC--CeEEEEEeCCCCEEEEEeCC
Confidence 3456888899999988 468999999999999999999887766654432 46789999999999999999
Q ss_pred CeEEEEcCCCCeEEEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 244 YTINVWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 244 g~v~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
++|++||+.....+..+..+ ...+.+++|+|++++|++|+.|++|++|+..+
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence 99999999887766655543 45789999999999999999999999999743
No 37
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=261.11 Aligned_cols=269 Identities=18% Similarity=0.270 Sum_probs=224.7
Q ss_pred eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961 10 TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTC 89 (320)
Q Consensus 10 ~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v 89 (320)
+....+..|...|.+++| |++++|++|+.||.|++|++.. ......+..|...|.++.|+++++.+++++.||.|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD----QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS----SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC----CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 344556788999999999 9999999999999999999842 23344567789999999999999999999999999
Q ss_pred EEEECCCc---ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc-------------
Q psy14961 90 ALWDVESS---QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL------------- 153 (320)
Q Consensus 90 ~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~------------- 153 (320)
++|++... +.+..+..|...+.++.+ +++.+++++.|+.|++|| .+.....+..|...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSF----QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEe----cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE
Confidence 99998654 556777889999988877 367999999999999999 44454444433322
Q ss_pred ---ccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961 154 ---ITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD 229 (320)
Q Consensus 154 ---~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 229 (320)
...++.+++|| .......+.. |...|.+++|+|++. +++++.||.|++||+++++.+..+..+.. .+.+++
T Consensus 158 l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~ 232 (313)
T 3odt_A 158 FLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHES--FVYCIK 232 (313)
T ss_dssp EEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEE
T ss_pred EEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCc--eEEEEE
Confidence 13588999999 4556666766 889999999999988 99999999999999999888777664432 467899
Q ss_pred EecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 230 ~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
|+|++ .|++|+.||.|++||..++..+..+..|..+|.+++|+|+++ |++++.|+.|++|+.++.
T Consensus 233 ~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 233 LLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp ECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred EecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 99999 588999999999999999999999999999999999999998 667999999999997554
No 38
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=271.96 Aligned_cols=232 Identities=17% Similarity=0.222 Sum_probs=189.2
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS 97 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 97 (320)
+...|.+++|+|++ .|++|+.||.|++||+...+........+.+|...|.++.|++++++|++|+.|++|++||++++
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 45679999999986 68899999999999996543322233345689999999999999999999999999999999999
Q ss_pred ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC---------------Cc-cc--cCCCe
Q psy14961 98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH---------------HN-LI--TDDKL 159 (320)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~---------------~~-~~--~~d~~ 159 (320)
+++..+.+|...|.++++.+.. ...|++++.|+.|++||+++++....+..+ .. ++ ..|+.
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHK-DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSC-TTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred cEEEEEcCcCCceEEEEecCCC-CCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence 9999999999999999886642 257899999999999999988765543211 11 11 36899
Q ss_pred EEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EE
Q psy14961 160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LL 237 (320)
Q Consensus 160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l 237 (320)
|++||+++++++.++.+|...|.+++|+|++ ++|++|+.|++|++||+++++.... ..+. -.+.+++|+|++. +|
T Consensus 239 v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~~H~--~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-QAHR--DFVRDATWSPLNHSLL 315 (344)
T ss_dssp EEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-CCCS--SCEEEEEECSSSTTEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-cCCC--CCEEEEEEeCCCCeEE
Confidence 9999999999999999999999999999998 5789999999999999998875433 3222 2468899999986 67
Q ss_pred EEEeCCCeEEEEcCCCC
Q psy14961 238 FAGYNDYTINVWDSLKC 254 (320)
Q Consensus 238 ~~g~~dg~v~~wd~~~~ 254 (320)
++|+.|++|++|++.+.
T Consensus 316 as~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 316 TTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEETTSCEEEEECCC-
T ss_pred EEEcCCCeEEEEECCCC
Confidence 79999999999997653
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.9e-38 Score=286.19 Aligned_cols=274 Identities=18% Similarity=0.187 Sum_probs=205.7
Q ss_pred EeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEE
Q psy14961 16 TMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWD 93 (320)
Q Consensus 16 ~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd 93 (320)
..+...|++++|+| ++++||+|+.||.|+|||+...+. .....+.+|.+.|.++.|+| ++.+|++|+.||+|++||
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~--~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK--PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC--CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc--eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 45677899999999 567999999999999999864322 22334568999999999986 678999999999999999
Q ss_pred CCCcceeeecccC--ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc--------------c--cc
Q psy14961 94 VESSQLLQSFHGH--TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN--------------L--IT 155 (320)
Q Consensus 94 ~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~--------------~--~~ 155 (320)
++++........+ ...+.++++ ++++++|++|+.||.|++||++.. .+..+.+|.. + .+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDV--SASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEE--ETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred ccCCceeEEeccCCCCccEEEEEE--CCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEec
Confidence 9876543333333 334555655 456899999999999999998653 2333333221 1 13
Q ss_pred CCCeEEEEECcCCeeee---eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc----eeeeEEE
Q psy14961 156 DDKLVNIWDMRTGYCVQ---SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI----LFGATSV 228 (320)
Q Consensus 156 ~d~~i~iwd~~~~~~~~---~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~ 228 (320)
.|+.|++||+++..... ...+|...|.+++|+|+|.+|++++.||.|++||+.++........+.. ......+
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 68999999998865443 3367999999999999999999999999999999988765444322211 1112345
Q ss_pred EEecCCcEEEEEe------------CCCeEEEEcCCCCeEEEEee-cCCCceeEE-EECcCCCeEEEecCCCceEeeecc
Q psy14961 229 DFSVSGRLLFAGY------------NDYTINVWDSLKCCRVNHLM-GHENRVSCL-QVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 229 ~~s~~~~~l~~g~------------~dg~v~~wd~~~~~~~~~~~-~h~~~i~~i-~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.|+|++.++++++ .++.|++||..++..+..+. +|...|.++ +|+|+|++||+|+ |++|++|+.+
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence 5777777766664 23579999999888877764 788889887 6999999999987 7899999975
Q ss_pred h
Q psy14961 295 N 295 (320)
Q Consensus 295 ~ 295 (320)
+
T Consensus 430 ~ 430 (435)
T 4e54_B 430 E 430 (435)
T ss_dssp -
T ss_pred c
Confidence 4
No 40
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-39 Score=293.33 Aligned_cols=289 Identities=11% Similarity=0.089 Sum_probs=209.9
Q ss_pred CeEeecccceeE----EEEEeCccceEEEEEcCC------CCEEEEecCCCeEEEEEecccCCc-------ccccccccc
Q psy14961 1 MIIWDGLTQTKE----HSVTMPATWVMACAYAPS------GSVVASGGLDNKVTVYAIALEDDS-------SAKKKTVAT 63 (320)
Q Consensus 1 ~~~W~~~~~~~~----~~~~~~~~~V~~~~~~~~------~~~l~s~~~dg~i~v~~~~~~~~~-------~~~~~~~~~ 63 (320)
|+|||..+++.. ..+..|...|.+++|+|+ +.+||+|+.||+|++|++...... ......+.+
T Consensus 185 I~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~ 264 (524)
T 2j04_B 185 IQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL 264 (524)
T ss_dssp EEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred EEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence 469998776532 223456678999999997 579999999999999998643211 011225668
Q ss_pred cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCC
Q psy14961 64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTG 141 (320)
Q Consensus 64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~ 141 (320)
|...|.++.|+++ ..|++|+.||+|++||++++ .+...+.+|...|.++++..++++ .+|++++.|+.|++||++++
T Consensus 265 h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~ 343 (524)
T 2j04_B 265 ADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI 343 (524)
T ss_dssp TTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH
T ss_pred CCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC
Confidence 8999999999875 58999999999999999876 445567889999999865556666 89999999999999999876
Q ss_pred cEEEEeccCC---------------ccc--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEE
Q psy14961 142 YCVQSFEGHH---------------NLI--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRL 204 (320)
Q Consensus 142 ~~~~~~~~~~---------------~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~i 204 (320)
+++..+.+|. .++ ..|+.|++||++++.+...+.+|...|.+++|+|+|+.|++|+.||+|++
T Consensus 344 ~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l 423 (524)
T 2j04_B 344 ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLII 423 (524)
T ss_dssp HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence 5433332221 111 35788999999999988888999999999999999999999999999999
Q ss_pred EECCCCeeEeEEecC---cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-CCeEEEEeecCCCceeEEEECcCCC---
Q psy14961 205 FDLRADKEVACYKKD---SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-KCCRVNHLMGHENRVSCLQVSPDGT--- 277 (320)
Q Consensus 205 wd~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h~~~i~~i~~s~~~~--- 277 (320)
||+... .+..+... .....+.+++|+|++..+. ...+ +.+|+.. ++..+..+.+|..+|.+++|+|++.
T Consensus 424 wd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~ 499 (524)
T 2j04_B 424 TNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGK 499 (524)
T ss_dssp CBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECCC--CCCCC-------------CCCSCCCEEECCSTTTTT
T ss_pred EechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccH
Confidence 998643 21111100 0111245788999998552 2222 3333322 3456667889999999999999954
Q ss_pred eEEEecCCCceEeeecc
Q psy14961 278 AFSSGSWDTTLRDEESK 294 (320)
Q Consensus 278 ~l~s~s~D~~ir~~~~~ 294 (320)
.||+|+.||+||+|+..
T Consensus 500 ~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 500 CYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp EEEEECTTSEEEEEECS
T ss_pred HHHhhccCceEEEEEcc
Confidence 99999999999999964
No 41
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=270.96 Aligned_cols=286 Identities=15% Similarity=0.209 Sum_probs=229.2
Q ss_pred eecccceeEEEEEeCccceEEEEEcCC---CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 4 WDGLTQTKEHSVTMPATWVMACAYAPS---GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 4 W~~~~~~~~~~~~~~~~~V~~~~~~~~---~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|+....+....+..|...|++++|+|+ |++|++|+.||.|++|++.... ......+..|...|.++.|++++++|
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--ceeEEEeccccCCEEEEEECcCCCEE
Confidence 333444444455678899999999999 6999999999999999986322 12224567899999999999999999
Q ss_pred EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc-------
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL------- 153 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~------- 153 (320)
++++.||.|++||+++++.+. +..|...|.++++.++++++.|++++.|+.|++||+++++.+..+..+...
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred EEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence 999999999999999888765 556999999999987888899999999999999999998877766554422
Q ss_pred -----ccCCCeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCCCE----EEEeeCCCeEEEEECCCCe---eEeEEecC
Q psy14961 154 -----ITDDKLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSGDA----VATGSDDATCRLFDLRADK---EVACYKKD 219 (320)
Q Consensus 154 -----~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g~~----l~s~s~dg~i~iwd~~~~~---~~~~~~~~ 219 (320)
...++.+.+|+++........ ..+...+.++++.++... +++++.||.|++||++... ....+..+
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 260 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 260 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECS
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeee
Confidence 245788999999876433222 234456677777665544 9999999999999998763 23333332
Q ss_pred cce----------eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceE
Q psy14961 220 SIL----------FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLR 289 (320)
Q Consensus 220 ~~~----------~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir 289 (320)
... ..+.+++|+|++++|++|+.||.|++||+.++..+..+.+|..+|++++|+|+|++|++||.|+..+
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTT
T ss_pred ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccc
Confidence 210 1368899999999999999999999999999999999999999999999999999999999988766
Q ss_pred eee
Q psy14961 290 DEE 292 (320)
Q Consensus 290 ~~~ 292 (320)
.++
T Consensus 341 ~~~ 343 (368)
T 3mmy_A 341 GHE 343 (368)
T ss_dssp CGG
T ss_pred ccc
Confidence 665
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.3e-37 Score=271.18 Aligned_cols=273 Identities=16% Similarity=0.161 Sum_probs=222.6
Q ss_pred EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
..|...|.+++|+|++++|++++.|+.|++|++... .......+..|...|.++.|+++++++++++.||.|++||++
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN--KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT--EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC--cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 457889999999999999999999999999998532 112445677899999999999999999999999999999998
Q ss_pred Ccceee--ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE---EEEe-ccCCcc---------------c
Q psy14961 96 SSQLLQ--SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC---VQSF-EGHHNL---------------I 154 (320)
Q Consensus 96 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~---~~~~-~~~~~~---------------~ 154 (320)
+++... .+..|...+.++++.+ +++.|++++.|+.|++||+..+.. ...+ .+|... .
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAP--NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECT--TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCeeeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 876443 3466888998888854 688999999999999999987652 2222 222211 1
Q ss_pred cCCCeEEEEEC------------------cCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961 155 TDDKLVNIWDM------------------RTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY 216 (320)
Q Consensus 155 ~~d~~i~iwd~------------------~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~ 216 (320)
..|+.+++||+ ..+.++..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 35889999995 367788888899999999999999999999999999999999988877766
Q ss_pred ecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC--Ce--------------------------------EE-----
Q psy14961 217 KKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK--CC--------------------------------RV----- 257 (320)
Q Consensus 217 ~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~--~~--------------------------------~~----- 257 (320)
..+.. .+.+++|+|++.+|++| .|+.|++|+... +. ..
T Consensus 241 ~~~~~--~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (372)
T 1k8k_C 241 ASETL--PLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 317 (372)
T ss_dssp ECSSC--CEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred ccCCC--CeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence 65432 46789999999999888 899999999766 31 00
Q ss_pred -EEe-ecCCCceeEEEEC-cCC---CeEEEecCCCceEeeecch
Q psy14961 258 -NHL-MGHENRVSCLQVS-PDG---TAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 258 -~~~-~~h~~~i~~i~~s-~~~---~~l~s~s~D~~ir~~~~~~ 295 (320)
..+ .+|.++|++++|+ ++| ++|+|||.|++|++|+...
T Consensus 318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred cccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 223 3899999999966 577 9999999999999999754
No 43
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=264.90 Aligned_cols=243 Identities=20% Similarity=0.327 Sum_probs=211.2
Q ss_pred CeEeecccceeE--EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961 1 MIIWDGLTQTKE--HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ 78 (320)
Q Consensus 1 ~~~W~~~~~~~~--~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 78 (320)
|+|||..+.+.. ..+..|...|.+++|++++.++++++.|+.|++||+.. ......+..|...+.++.|+++++
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~----~~~~~~~~~~~~~~~~~~~spdg~ 135 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLEN----GKQIKSIDAGPVDAWTLAFSPDSQ 135 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCTTCCCCEEECTTSS
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC----CCEEEEEeCCCccEEEEEECCCCC
Confidence 479998766543 34567888999999999999999999999999999853 233445667778889999999999
Q ss_pred EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc----
Q psy14961 79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---- 154 (320)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---- 154 (320)
+|++|+.||.|++|++++++....+..|...+.++++. |++++|++|+.|+.|++||+++++.+..+.+|...+
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~s--pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 213 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYS--PDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 213 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEE
T ss_pred EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEEC--CCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEE
Confidence 99999999999999999998888888888889888775 578999999999999999999999888887765432
Q ss_pred -----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961 155 -----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF 223 (320)
Q Consensus 155 -----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 223 (320)
+.|+.|++||++++.+...+.+|...|.+++|+|++.+|++++.|++|++||+++++.+..+..+..
T Consensus 214 ~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~-- 291 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD-- 291 (321)
T ss_dssp ECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC--
Confidence 3588999999999999999999999999999999999999999999999999999888776654432
Q ss_pred eeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961 224 GATSVDFSVSGRLLFAGYNDYTINVWDS 251 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~ 251 (320)
.+.+++|+|++++|++++.||+|++||.
T Consensus 292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 292 QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 4678999999999999999999999995
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-36 Score=272.88 Aligned_cols=260 Identities=23% Similarity=0.391 Sum_probs=216.0
Q ss_pred CeEeecccceeEEEEE--eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961 1 MIIWDGLTQTKEHSVT--MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ 78 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~--~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 78 (320)
|+|||..+++....+. .|...|++++|+|+|++|++|+.||.|++||+.. ......+.+|...+.++.+. +.
T Consensus 127 V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~----~~~~~~~~~h~~~v~~~s~~--~~ 200 (420)
T 4gga_A 127 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ----QKRLRNMTSHSARVGSLSWN--SY 200 (420)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEE--TT
T ss_pred EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC----CcEEEEEeCCCCceEEEeeC--CC
Confidence 5799999988766554 4567899999999999999999999999999852 23455677899999988774 67
Q ss_pred EEEEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961 79 QILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD 157 (320)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d 157 (320)
.+++|+.|+.+++||.... ..+..+.+|...+..+.+. +++..+++++.|+.+++||...++..
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~--~~g~~l~s~~~D~~v~i~~~~~~~~~------------- 265 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA--PDGRHLASGGNDNLVNVWPSAPGEGG------------- 265 (420)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSCEEEEESSCCSSC-------------
T ss_pred EEEEEeCCCceeEeeecccceeeEEecccccceeeeeec--CCCCeeeeeeccccceEEeecccccc-------------
Confidence 8999999999999998764 4556788899999887764 46889999999999999998765321
Q ss_pred CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEE--eeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961 158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVAT--GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG 234 (320)
Q Consensus 158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 234 (320)
...+.....|...|.+++|+|.+. .+++ |+.|++|++||+.+++....+..+. .+.++.|+|++
T Consensus 266 ----------~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~---~v~~~~~~~~~ 332 (420)
T 4gga_A 266 ----------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVCSILWSPHY 332 (420)
T ss_dssp ----------SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---CEEEEEEETTT
T ss_pred ----------ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---ceeeeeecCCC
Confidence 112344566888999999999765 4554 4589999999999998877665543 35678899999
Q ss_pred cEEEEEe--CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 235 RLLFAGY--NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 235 ~~l~~g~--~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
..+++++ .|+.|++||..++.++.++.+|.+.|++|+|+|||++|||||.|++||+|+..
T Consensus 333 ~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 333 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 9888765 78999999999999999999999999999999999999999999999999964
No 45
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=273.96 Aligned_cols=294 Identities=18% Similarity=0.240 Sum_probs=229.7
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCccccc---------ccccccccCeEEE
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKK---------KTVATHTSFISCC 71 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~---------~~~~~h~~~v~~~ 71 (320)
++|+....+.......|...|++++|+| ++++|++|+.||.|++|++.......... .....|...|.++
T Consensus 26 ~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 105 (408)
T 4a11_B 26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETV 105 (408)
T ss_dssp HHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEE
T ss_pred eeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEE
Confidence 4677777666666667999999999999 99999999999999999986432211110 0113589999999
Q ss_pred EecC-CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeC-CCCCEEEEEeCCCeEEEEeCCCCcEEEEecc
Q psy14961 72 IFPN-SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPS-ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG 149 (320)
Q Consensus 72 ~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~ 149 (320)
.|.+ ++..+++++.||.|++||+.+++....+. +...+.++.+.+. +++..+++++.|+.|++||++++..+..+..
T Consensus 106 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 184 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG 184 (408)
T ss_dssp EECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC
T ss_pred EEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC
Confidence 9988 67799999999999999999988877765 6777888888764 3556999999999999999998876666654
Q ss_pred CCcc----------------ccCCCeEEEEECcCCe-eeeee---------------cCCCCCeEEEEEcCCCCEEEEee
Q psy14961 150 HHNL----------------ITDDKLVNIWDMRTGY-CVQSF---------------EGHQSDVNSVKFHPSGDAVATGS 197 (320)
Q Consensus 150 ~~~~----------------~~~d~~i~iwd~~~~~-~~~~~---------------~~~~~~v~~v~~~p~g~~l~s~s 197 (320)
|... ...|+.|++||++++. +...+ .+|...|.+++|+|++++|++++
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 4322 1368899999998765 33333 57888999999999999999999
Q ss_pred CCCeEEEEECCCCeeEeEEecCcce---eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961 198 DDATCRLFDLRADKEVACYKKDSIL---FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP 274 (320)
Q Consensus 198 ~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~ 274 (320)
.||.|++||+++++........... ...........+..+++++.++.|++||..++..+..+.+|...|++++|+|
T Consensus 265 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~ 344 (408)
T 4a11_B 265 TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS 344 (408)
T ss_dssp TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEET
T ss_pred CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcC
Confidence 9999999999987654332211100 0111112223455677778899999999999999999999999999999999
Q ss_pred CCCeEEEecCCCceEeeecchH
Q psy14961 275 DGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 275 ~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
++++|++|+.|++|++|+....
T Consensus 345 ~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 345 NFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp TTTEEEEEETTSCEEEEEECC-
T ss_pred CCCEEEEECCCCeEEEEeCCCC
Confidence 9999999999999999997543
No 46
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-36 Score=273.52 Aligned_cols=279 Identities=23% Similarity=0.447 Sum_probs=239.9
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|++||..+++....+..|...|.+++|+ +++|++|+.||.|++||+.. ......+..|...|.++.+. ++.+
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~--~~~l 212 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET----GECIHTLYGHTSTVRCMHLH--EKRV 212 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEE--TTEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc----CcEEEEECCCCCcEEEEEec--CCEE
Confidence 5799999999888888899999999997 56999999999999999853 23445677899999999985 5689
Q ss_pred EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc------
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI------ 154 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~------ 154 (320)
++|+.||.|++||+.+++.+..+.+|...+.++.+ +++.+++++.||.|++||++++.++..+.+|...+
T Consensus 213 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 288 (445)
T 2ovr_B 213 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 288 (445)
T ss_dssp EEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE----CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE----CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEEC
Confidence 99999999999999999999999999999998876 46899999999999999999998888887665432
Q ss_pred -------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-ceeeeE
Q psy14961 155 -------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS-ILFGAT 226 (320)
Q Consensus 155 -------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~ 226 (320)
+.|+.|++||+++++++..+.+|...+.+++++ ++++++++.||.|++||+++++.+..+.... ....+.
T Consensus 289 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 289 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 366 (445)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEE
Confidence 358999999999999999999999999988875 5699999999999999999888776665421 122355
Q ss_pred EEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe-----ecCCCceeEEEECcCCCeEEEecCCCc----eEeeecch
Q psy14961 227 SVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL-----MGHENRVSCLQVSPDGTAFSSGSWDTT----LRDEESKN 295 (320)
Q Consensus 227 ~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-----~~h~~~i~~i~~s~~~~~l~s~s~D~~----ir~~~~~~ 295 (320)
+++| ++.+|++|+.||.|++||..+++.+..+ .+|.+.|++++|+|++.+|++|+.||+ +.+||...
T Consensus 367 ~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 367 CLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 6666 4689999999999999999998888777 478899999999999999999999998 99999653
No 47
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-36 Score=284.68 Aligned_cols=283 Identities=16% Similarity=0.202 Sum_probs=233.0
Q ss_pred CeEeecccceeEEEEEeCcc---ceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccccccc-c---ccccCeEEEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPAT---WVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAKKKTV-A---THTSFISCCI 72 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~---~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~---~h~~~v~~~~ 72 (320)
|++||..+.+....+..|.. .|.+++|+|+ +++|++++.|+.|++||+... .....+ . .|...|.++.
T Consensus 185 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~v~~~~ 260 (615)
T 1pgu_A 185 VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG----EFLKYIEDDQEPVQGGIFALS 260 (615)
T ss_dssp EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC----CEEEECCBTTBCCCSCEEEEE
T ss_pred EEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC----CEeEEecccccccCCceEEEE
Confidence 47999999988888777888 8999999999 999999999999999998532 223344 4 7899999999
Q ss_pred ecCCCCEEEEEeCCCeEEEEECCCcceeeecccC----ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961 73 FPNSDQQILTGSGDCTCALWDVESSQLLQSFHGH----TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE 148 (320)
Q Consensus 73 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~ 148 (320)
|+ +++.+++++.|+.|++||+.+++.+..+..+ ...+..+.+. +++.+++++.|+.|++||+.+++.+..+.
T Consensus 261 ~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~g~i~~~d~~~~~~~~~~~ 336 (615)
T 1pgu_A 261 WL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT---GNGRIISLSLDGTLNFYELGHDEVLKTIS 336 (615)
T ss_dssp ES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE---ETTEEEEEETTSCEEEEETTEEEEEEEEC
T ss_pred Ec-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC---CCCeEEEEECCCCEEEEECCCCcEEEEEe
Confidence 99 8999999999999999999999888877765 3455555543 57899999999999999987765554443
Q ss_pred cCCcc---------------------------------------------------------------------------
Q psy14961 149 GHHNL--------------------------------------------------------------------------- 153 (320)
Q Consensus 149 ~~~~~--------------------------------------------------------------------------- 153 (320)
+|...
T Consensus 337 ~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~ 416 (615)
T 1pgu_A 337 GHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANN 416 (615)
T ss_dssp CCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECS
T ss_pred CCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcC
Confidence 32100
Q ss_pred ---------------------------------------------ccC-CCeEEEEECcCCeee-eeecCCCCCeEEEEE
Q psy14961 154 ---------------------------------------------ITD-DKLVNIWDMRTGYCV-QSFEGHQSDVNSVKF 186 (320)
Q Consensus 154 ---------------------------------------------~~~-d~~i~iwd~~~~~~~-~~~~~~~~~v~~v~~ 186 (320)
... ++.+++||+.++... ..+.+|...|.+++|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~ 496 (615)
T 1pgu_A 417 DGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 496 (615)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEE
T ss_pred CCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEE
Confidence 011 666777777665544 667789999999999
Q ss_pred cCCCCEEEEeeCCCeEEEEECCCCeeEeEEec-CcceeeeEEEEEec----------CCcEEEEEeCCCeEEEEcCCCC-
Q psy14961 187 HPSGDAVATGSDDATCRLFDLRADKEVACYKK-DSILFGATSVDFSV----------SGRLLFAGYNDYTINVWDSLKC- 254 (320)
Q Consensus 187 ~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~s~----------~~~~l~~g~~dg~v~~wd~~~~- 254 (320)
+|++++|++++.||.|++||+.+++.+..+.. +. ..+.+++|+| ++++|++|+.||.|++||+.+.
T Consensus 497 s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 574 (615)
T 1pgu_A 497 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT--SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM 574 (615)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS--SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred CCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC--CceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc
Confidence 99999999999999999999999887765443 22 2468899999 9999999999999999999886
Q ss_pred eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 255 CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 255 ~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
..+..+.+|...|++++|+|+++ |++++.|++|++|+..
T Consensus 575 ~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 575 KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 67788899999999999999999 9999999999999974
No 48
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.2e-36 Score=271.94 Aligned_cols=271 Identities=19% Similarity=0.302 Sum_probs=226.4
Q ss_pred EEEEEeCccce-EEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961 12 EHSVTMPATWV-MACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA 90 (320)
Q Consensus 12 ~~~~~~~~~~V-~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 90 (320)
...+..|...| .++.| ++++|++|+.||.|++||+.. ......+.+|...|.++.|++++ .+++|+.||+|+
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~----~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSIN----KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCC----CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 34556676664 54444 567999999999999999742 23455677899999999998776 999999999999
Q ss_pred EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-----------------------EEEe
Q psy14961 91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-----------------------VQSF 147 (320)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-----------------------~~~~ 147 (320)
+||+++++.+..+.+|.+.|.++++.+.++++.+++++.|+.|++||++++.. +..+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999999999999999999999999888889999999999999999987642 2233
Q ss_pred ccCCcc-------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961 148 EGHHNL-------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVA 214 (320)
Q Consensus 148 ~~~~~~-------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~ 214 (320)
.+|... ...|+.|++||+++++++..+.+|...|.+++|+|+++++++|+.||.|++||+++++.+.
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 333322 1368999999999999999999999999999999999999999999999999999998877
Q ss_pred EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 215 CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.+..+.. .+..+.|+ +.+|++|+.||.|++||..+....... .|...+..++|+|++++|++|+ |++|++|+.+
T Consensus 347 ~~~~h~~--~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 347 TLQGHTA--LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp EECCCSS--CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred EEeCCCC--cEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 7665443 34566665 689999999999999999887655443 4777889999999999999998 9999999964
Q ss_pred h
Q psy14961 295 N 295 (320)
Q Consensus 295 ~ 295 (320)
.
T Consensus 421 ~ 421 (464)
T 3v7d_B 421 S 421 (464)
T ss_dssp T
T ss_pred C
Confidence 4
No 49
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.6e-37 Score=266.72 Aligned_cols=266 Identities=17% Similarity=0.169 Sum_probs=211.5
Q ss_pred EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCCEEEEEeCCCeEEEEE
Q psy14961 16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQQILTGSGDCTCALWD 93 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd 93 (320)
..|...|++++|+|++++|++|+.||.|++|++............+..|...|.++.|++ ++++|++|+.||.|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 468899999999999999999999999999998644333334556678999999999988 589999999999999999
Q ss_pred CCCc---------ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEE
Q psy14961 94 VESS---------QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWD 164 (320)
Q Consensus 94 ~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd 164 (320)
++++ +.+..+..|...+.++++.+...+++|++++.|+.|++||+++++.+..+.... .+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------~~~--- 157 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS-------EMK--- 157 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE-------EEE---
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc-------ccc---
Confidence 9876 456778889999999988664337899999999999999998876432221000 000
Q ss_pred CcCCeeeeeecCCCCCeEEEEEcCC---CCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC----cEE
Q psy14961 165 MRTGYCVQSFEGHQSDVNSVKFHPS---GDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG----RLL 237 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~v~~v~~~p~---g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~~l 237 (320)
.......+|...+.+++|+|+ +..+++++.|+.+.+|+...++.............+.+++|+|++ .+|
T Consensus 158 ----~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 158 ----VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp ----SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred ----ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence 000112357788999999997 899999999999988887776543222222222346889999998 899
Q ss_pred EEEeCCCeEEEEcCCCC----------------------------------------------eEEEEeecCCCceeEEE
Q psy14961 238 FAGYNDYTINVWDSLKC----------------------------------------------CRVNHLMGHENRVSCLQ 271 (320)
Q Consensus 238 ~~g~~dg~v~~wd~~~~----------------------------------------------~~~~~~~~h~~~i~~i~ 271 (320)
++|+.||.|++||+... ..+..+.+|...|++++
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence 99999999999997653 55667789999999999
Q ss_pred ECcCCCeEEEecCCCceEeeecch
Q psy14961 272 VSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 272 ~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
|+|++++|++|+.|++|++|+...
T Consensus 314 ~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ECSSSCCEEEEETTSCEEEEEECT
T ss_pred EcCCCCEEEEecCCCcEEEEecCc
Confidence 999999999999999999999754
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.4e-37 Score=271.05 Aligned_cols=272 Identities=16% Similarity=0.246 Sum_probs=217.9
Q ss_pred eCccceEEEEEcCC----CCEEEEecCCCeEEEEEecccCCccccccc--ccccccCeEEEEecCC----CCEEEEEeCC
Q psy14961 17 MPATWVMACAYAPS----GSVVASGGLDNKVTVYAIALEDDSSAKKKT--VATHTSFISCCIFPNS----DQQILTGSGD 86 (320)
Q Consensus 17 ~~~~~V~~~~~~~~----~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~----~~~l~s~~~d 86 (320)
.|...|++++|+|+ ...+++++.++.|++|++....... .... ...|...|.++.|+++ +.+|++|+.|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR-LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE-EEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE-eeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 57889999999984 5567777778899999986332211 1111 1236678999999887 5689999999
Q ss_pred CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe---ccCCccc---------
Q psy14961 87 CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF---EGHHNLI--------- 154 (320)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~---~~~~~~~--------- 154 (320)
|.|++||+.+++.+..+.+|...|.++++.|. +++.|++++.||.|++||+++++.+..+ .+|...+
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPR-DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSS-CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCC-CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 99999999999999999999999999988652 5789999999999999999999888777 4443322
Q ss_pred ------cCCCeEEEEECcCCeeeeeec----------------------------CCCCCeEEEEEcCCCCEEEEeeCCC
Q psy14961 155 ------TDDKLVNIWDMRTGYCVQSFE----------------------------GHQSDVNSVKFHPSGDAVATGSDDA 200 (320)
Q Consensus 155 ------~~d~~i~iwd~~~~~~~~~~~----------------------------~~~~~v~~v~~~p~g~~l~s~s~dg 200 (320)
..|+.|++||+++++....+. +|...|.+++|+ ++++++++.|+
T Consensus 174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~ 251 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN 251 (366)
T ss_dssp SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS
T ss_pred CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC
Confidence 358899999998876554443 389999999999 77999999999
Q ss_pred eEEEEECCCCee--------------EeEEecCcceeeeEEEEEecC--CcEEEEEeCCCeEEEEcCCCCe----EEEEe
Q psy14961 201 TCRLFDLRADKE--------------VACYKKDSILFGATSVDFSVS--GRLLFAGYNDYTINVWDSLKCC----RVNHL 260 (320)
Q Consensus 201 ~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~s~~--~~~l~~g~~dg~v~~wd~~~~~----~~~~~ 260 (320)
.|++||+++.+. +..+..+. ..+..++|+|+ +++|++|+.||.|++||+.... ....+
T Consensus 252 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 329 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ--CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL 329 (366)
T ss_dssp EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS--CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred EEEEEeCCCccccccccccCCcchheeccccccC--CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence 999999876543 22222222 13567889999 9999999999999999988754 44467
Q ss_pred ecC--CCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 261 MGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 261 ~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.+| ...|++++|+|++++|++|+.|++|++|+..
T Consensus 330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 777 7899999999999999999999999999963
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-36 Score=268.58 Aligned_cols=258 Identities=22% Similarity=0.382 Sum_probs=215.9
Q ss_pred CeEeecccceeEEEEEe-CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961 1 MIIWDGLTQTKEHSVTM-PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ 79 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~-~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 79 (320)
|++||..+++....... |...|.+++|+|++++|++|+.||.|++|++.. ......+..|...|.++.| ++..
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~--~~~~ 188 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVES----QTKLRTMAGHQARVGCLSW--NRHV 188 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEE--ETTE
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcC----CeEEEEecCCCCceEEEEE--CCCE
Confidence 57999999887766655 678999999999999999999999999999853 2334566789999999999 4679
Q ss_pred EEEEeCCCeEEEEECC-CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961 80 ILTGSGDCTCALWDVE-SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK 158 (320)
Q Consensus 80 l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~ 158 (320)
+++|+.||.|++||+. ....+..+..|.+.|.++++++ +++.|++++.|+.|++||++++..+
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~-------------- 252 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS--DGLQLASGGNDNVVQIWDARSSIPK-------------- 252 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTCSSEE--------------
T ss_pred EEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC--CCCEEEEEeCCCeEEEccCCCCCcc--------------
Confidence 9999999999999998 4666778889999999988865 6889999999999999998765443
Q ss_pred eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc
Q psy14961 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR 235 (320)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 235 (320)
..+.+|...|.+++|+|++. .+++++ .|+.|++||+++++.+..+.... .+.+++|+|++.
T Consensus 253 -------------~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~---~v~~~~~s~~~~ 316 (401)
T 4aez_A 253 -------------FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS---QVTSLIWSPHSK 316 (401)
T ss_dssp -------------EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS---CEEEEEECSSSS
T ss_pred -------------EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC---cEEEEEECCCCC
Confidence 33456788899999999765 556654 79999999999988877665443 367899999999
Q ss_pred EEEE--EeCCCeEEEEcCCCCeE--EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 236 LLFA--GYNDYTINVWDSLKCCR--VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 236 ~l~~--g~~dg~v~~wd~~~~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
++++ |+.||.|++||+.+... ...+.+|...|.+++|+|++++|++++.|++|++|+....
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 9999 55899999999887543 4456799999999999999999999999999999997543
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7e-37 Score=308.33 Aligned_cols=289 Identities=24% Similarity=0.378 Sum_probs=242.7
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC--CCC
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN--SDQ 78 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~ 78 (320)
|+|||..+++....+..|...|.+++|+|++++|++++.|+.|++||+.. ......+.+|...|.++.|++ ++.
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT----GKLVHTYDEHSEQVNCCHFTNKSNHL 714 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----CCEEEEEECCSSCEEEEEECSSSSCC
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC----CceEEEEcCCCCcEEEEEEecCCCce
Confidence 57999999998888888999999999999999999999999999999853 234456778999999999988 455
Q ss_pred EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec----------
Q psy14961 79 QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE---------- 148 (320)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~---------- 148 (320)
.+++|+.|+.|++||+.+++.+..+.+|.+.|.+++++| +++.|++++.||.|++||+.++.....+.
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 792 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP--DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSED 792 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS--STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-----
T ss_pred EEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec--CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCC
Confidence 889999999999999999999999999999999988855 68899999999999999997765443321
Q ss_pred ---------------------------------------------cCCcc---------------ccCCCeEEEEECcCC
Q psy14961 149 ---------------------------------------------GHHNL---------------ITDDKLVNIWDMRTG 168 (320)
Q Consensus 149 ---------------------------------------------~~~~~---------------~~~d~~i~iwd~~~~ 168 (320)
+|... ...++.|++||+.++
T Consensus 793 ~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~ 872 (1249)
T 3sfz_A 793 PPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR 872 (1249)
T ss_dssp ---CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT
T ss_pred ccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC
Confidence 11110 124678999999999
Q ss_pred eeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee---------E--------------------eEEecC
Q psy14961 169 YCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE---------V--------------------ACYKKD 219 (320)
Q Consensus 169 ~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~---------~--------------------~~~~~~ 219 (320)
.+...+.+|...|.+++|+|+|+.+++++.|+.+++||+..... . ......
T Consensus 873 ~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 952 (1249)
T 3sfz_A 873 LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGK 952 (1249)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEES
T ss_pred ceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecC
Confidence 99999999999999999999999999999999999999643100 0 000000
Q ss_pred c------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 220 S------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 220 ~------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
. ....+..++|+|+++++++|+.+|.|.+||..++.....+.+|...|++++|+|+|++|++++.|++|++|+.
T Consensus 953 ~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 953 TGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp SCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred cceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 0 0113578899999999999999999999999988888888999999999999999999999999999999996
Q ss_pred ch
Q psy14961 294 KN 295 (320)
Q Consensus 294 ~~ 295 (320)
..
T Consensus 1033 ~~ 1034 (1249)
T 3sfz_A 1033 QT 1034 (1249)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-37 Score=275.49 Aligned_cols=272 Identities=17% Similarity=0.300 Sum_probs=223.4
Q ss_pred cceEEEEEcCCCC-EEEEe----------cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe
Q psy14961 20 TWVMACAYAPSGS-VVASG----------GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT 88 (320)
Q Consensus 20 ~~V~~~~~~~~~~-~l~s~----------~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 88 (320)
..|.+++|+|+++ +|++| +.|+.|++|++...... .......|...|.++.|++++++|++|+.||.
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--KPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--SCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--cEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 4678899999987 99999 88999999998643211 11223358889999999999999999999999
Q ss_pred EEEEECCC----cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc------EEEEe---ccCC----
Q psy14961 89 CALWDVES----SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY------CVQSF---EGHH---- 151 (320)
Q Consensus 89 v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~------~~~~~---~~~~---- 151 (320)
|++||+.+ .+.+..+..|...|.++++.|. ++++|++++.|+.|++||+.++. ....+ ..|.
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAK-QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS-STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCC-CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 99999987 4577888899999999988653 26799999999999999998765 22111 1111
Q ss_pred ----------ccc--cCCCeEEEEECcCCeeeeeecCC------CCCeEEEEEcCCC-CEEEEeeCCC---eEEEEECCC
Q psy14961 152 ----------NLI--TDDKLVNIWDMRTGYCVQSFEGH------QSDVNSVKFHPSG-DAVATGSDDA---TCRLFDLRA 209 (320)
Q Consensus 152 ----------~~~--~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~v~~~p~g-~~l~s~s~dg---~i~iwd~~~ 209 (320)
.++ ..++.|++||+++++++..+..| ...|.+++|+|++ .++++++.|+ .|++||+++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 111 36889999999999998888776 7899999999997 6899999998 999999987
Q ss_pred C-eeEeEEe-cCcceeeeEEEEEec-CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCC-CeEEEecCC
Q psy14961 210 D-KEVACYK-KDSILFGATSVDFSV-SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDG-TAFSSGSWD 285 (320)
Q Consensus 210 ~-~~~~~~~-~~~~~~~~~~~~~s~-~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~-~~l~s~s~D 285 (320)
+ .....+. .+. ..+.+++|+| ++.+|++|+.||.|++||+.+...+..+.+|...|.+++|+|++ ++|++++.|
T Consensus 250 ~~~~~~~~~~~~~--~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 250 ANTPLQTLNQGHQ--KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp TTSCSBCCCSCCS--SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred CCCCcEEeecCcc--CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 5 3333333 222 2467899999 99999999999999999999999999999999999999999998 899999999
Q ss_pred CceEeeecchH
Q psy14961 286 TTLRDEESKNR 296 (320)
Q Consensus 286 ~~ir~~~~~~~ 296 (320)
++|++|+....
T Consensus 328 ~~i~iw~~~~~ 338 (416)
T 2pm9_A 328 NKIEVQTLQNL 338 (416)
T ss_dssp SEEEEEESCCC
T ss_pred CcEEEEEccCC
Confidence 99999997543
No 54
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.8e-36 Score=280.09 Aligned_cols=284 Identities=18% Similarity=0.239 Sum_probs=227.7
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEecCC-
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFPNS- 76 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~- 76 (320)
.+|| +++....+..|...|.+++|+|+++ ++++++.|+.|++||+.. ......+..|.. .|.++.|+++
T Consensus 145 ~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 145 ISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP----FKFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp EETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT----BEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred EEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC----cceeeeecccCCCCceEEEEEECCCC
Confidence 4677 4555666677889999999999998 899999999999999742 234456677888 9999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeec-c---cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSF-H---GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~ 152 (320)
++++++++.||.|++||+.+++.+..+ . .|...|.++++. +++.|++++.|+.|++||+++++.+..+..+..
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 295 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL---DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 295 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES---SSSEEEEEETTSEEEEEETTTTEEEEEEECCTT
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc---CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC
Confidence 999999999999999999999988888 5 899999998886 678999999999999999999988877765520
Q ss_pred ------------------cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-------------------------
Q psy14961 153 ------------------LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS------------------------- 189 (320)
Q Consensus 153 ------------------~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~------------------------- 189 (320)
....++.+++||+.+++++..+.+|...|.+++| |+
T Consensus 296 ~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~ 374 (615)
T 1pgu_A 296 QLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNL 374 (615)
T ss_dssp CGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSC
T ss_pred cccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCc
Confidence 1136889999999988888888777766666665 43
Q ss_pred --------CCEEEEeeCCCeEEEEECCC----------------------------------------------------
Q psy14961 190 --------GDAVATGSDDATCRLFDLRA---------------------------------------------------- 209 (320)
Q Consensus 190 --------g~~l~s~s~dg~i~iwd~~~---------------------------------------------------- 209 (320)
+..+++++.|+.+++||+..
T Consensus 375 v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (615)
T 1pgu_A 375 IVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSL 454 (615)
T ss_dssp EEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred eEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEE
Confidence 45555666666555555432
Q ss_pred ----------------------CeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec-CCCc
Q psy14961 210 ----------------------DKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-HENR 266 (320)
Q Consensus 210 ----------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~ 266 (320)
++... .........+.+++|+|++++|++|+.||.|++||+.+++.+..+.+ |...
T Consensus 455 ~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~ 533 (615)
T 1pgu_A 455 SQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSK 533 (615)
T ss_dssp CSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSC
T ss_pred cCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCc
Confidence 11110 00011112467899999999999999999999999999999988888 9999
Q ss_pred eeEEEECc----------CCCeEEEecCCCceEeeecchH
Q psy14961 267 VSCLQVSP----------DGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 267 i~~i~~s~----------~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
|++++|+| ++++|++|+.|++|++|+....
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 99999999 9999999999999999998654
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=254.63 Aligned_cols=263 Identities=24% Similarity=0.398 Sum_probs=211.5
Q ss_pred ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961 21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL 100 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (320)
+++.++||+++ +|++| .|++|+|||+...+ ......+..|...|.++.|+++++++++|+.||+|++||+++++.+
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~--~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCC--EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 45779999987 66655 69999999985321 1122234578888999999999999999999999999999999999
Q ss_pred eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc-EEEEeccCCcc---------------ccCCCeEEEEE
Q psy14961 101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY-CVQSFEGHHNL---------------ITDDKLVNIWD 164 (320)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~-~~~~~~~~~~~---------------~~~d~~i~iwd 164 (320)
..+.+|...+.++.. ++..+++++.++.+++|+...+. .+..+.+|... ...|+.|++||
T Consensus 103 ~~~~~h~~~~~~~~~----~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEECCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEecCccceEEEeec----CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence 999999888866543 35799999999999999987653 33444444322 13689999999
Q ss_pred CcCCee----eeeecCCCCCeEEEEEcCCCCE---EEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961 165 MRTGYC----VQSFEGHQSDVNSVKFHPSGDA---VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL 237 (320)
Q Consensus 165 ~~~~~~----~~~~~~~~~~v~~v~~~p~g~~---l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 237 (320)
+++++. ......|...|.+++++|++.. +++++.++.|++||.............. .+..+.|+|++..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 255 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVCSILWSPHYKEL 255 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS---CEEEEEEETTTTEE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee---eeeeeeecccccce
Confidence 987653 3445668889999999997653 3467789999999998877655444332 35678899999988
Q ss_pred EEEe--CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 238 FAGY--NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 238 ~~g~--~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
++++ .|+.|++||+.+++++.++.+|.++|++|+|+|||++|||||.|++||+|+..
T Consensus 256 ~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 7764 79999999999999999999999999999999999999999999999999974
No 56
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-37 Score=299.60 Aligned_cols=291 Identities=14% Similarity=0.105 Sum_probs=216.8
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc-------ccccccccCeEEEEe
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK-------KTVATHTSFISCCIF 73 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~-------~~~~~h~~~v~~~~~ 73 (320)
|+|||+.+++....+. +...|++++|+|++++|++|+.||.|++||+.......... ..+.+|.+.|.++.|
T Consensus 81 v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~ 159 (902)
T 2oaj_A 81 VYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW 159 (902)
T ss_dssp EEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred EEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEE
Confidence 5799999988777665 66789999999999999999999999999985322110000 234678899999999
Q ss_pred cCC-CCEEEEEeCCCeEEEEECCCcceeeecccC------------------ccceeEEEEeeCCCCCEEEEEeCCCeEE
Q psy14961 74 PNS-DQQILTGSGDCTCALWDVESSQLLQSFHGH------------------TGELMDLDLAPSETGNTFVSGSSDKLVN 134 (320)
Q Consensus 74 ~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~~l~s~~~dg~i~ 134 (320)
+++ +..+++|+.||.| +||+.+++++..+..| ...|.+++|+ ++|.+|++++.|+.|+
T Consensus 160 sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs--pdg~~lasgs~Dg~i~ 236 (902)
T 2oaj_A 160 NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH--PNSLHIITIHEDNSLV 236 (902)
T ss_dssp ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC--TTSSEEEEEETTCCEE
T ss_pred ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc--CCCCEEEEEECCCeEE
Confidence 986 4689999999999 9999998888777655 4678888875 4689999999999999
Q ss_pred EEeCCCCcEEEE--ec---cC-------------C-----------------c-cc------------------------
Q psy14961 135 IWDMRTGYCVQS--FE---GH-------------H-----------------N-LI------------------------ 154 (320)
Q Consensus 135 lwd~~~~~~~~~--~~---~~-------------~-----------------~-~~------------------------ 154 (320)
+||+++++++.. +. .| . . ++
T Consensus 237 lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~ 316 (902)
T 2oaj_A 237 FWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRY 316 (902)
T ss_dssp EEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCG
T ss_pred EEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCc
Confidence 999977665431 10 00 0 0 00
Q ss_pred ------------------------------------------------------cCCCeEEEEECcCCeeeee-------
Q psy14961 155 ------------------------------------------------------TDDKLVNIWDMRTGYCVQS------- 173 (320)
Q Consensus 155 ------------------------------------------------------~~d~~i~iwd~~~~~~~~~------- 173 (320)
..++.+++||+.++.....
T Consensus 317 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~ 396 (902)
T 2oaj_A 317 SITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQN 396 (902)
T ss_dssp GGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGG
T ss_pred cccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCc
Confidence 0134566676655432211
Q ss_pred ----------------------------------ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE--eEEe
Q psy14961 174 ----------------------------------FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV--ACYK 217 (320)
Q Consensus 174 ----------------------------------~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~--~~~~ 217 (320)
+.+|...+.+++|+|+++.|++|+.|++|++||+.++... ..+.
T Consensus 397 l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~ 476 (902)
T 2oaj_A 397 LSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFE 476 (902)
T ss_dssp GTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEE
T ss_pred ccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEE
Confidence 1233334444556789999999999999999999876321 0111
Q ss_pred cC-------cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC------------------------------------
Q psy14961 218 KD-------SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC------------------------------------ 254 (320)
Q Consensus 218 ~~-------~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~------------------------------------ 254 (320)
.. .....+.+++|+|+|++||+|+.||+|++||..+.
T Consensus 477 ~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (902)
T 2oaj_A 477 VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDR 556 (902)
T ss_dssp EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGG
T ss_pred eechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccccc
Confidence 00 11124789999999999999999999999997543
Q ss_pred ---------eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 255 ---------CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 255 ---------~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
.++..+.+|.++|++|+||||| +||+|+.|++||+||.+.+
T Consensus 557 ~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 557 APTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp CCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred CCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 2356778899999999999999 9999999999999997654
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.6e-36 Score=259.45 Aligned_cols=270 Identities=19% Similarity=0.286 Sum_probs=221.4
Q ss_pred EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
.++...|.+++|+|||++++++..++.+..|... ..........|...|.++.|+++++++++++ ||.|++||+.
T Consensus 6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~ 80 (337)
T 1gxr_A 6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIP----RHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS 80 (337)
T ss_dssp EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCC----SEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETT
T ss_pred cccCCceeEEEECCCCCEEEeecCCCcEeccccC----CccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECC
Confidence 3556788999999999999998877766555321 1122223447999999999999999999998 9999999998
Q ss_pred Ccceee---ecc--cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc--EEEEeccCCcc---------------
Q psy14961 96 SSQLLQ---SFH--GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY--CVQSFEGHHNL--------------- 153 (320)
Q Consensus 96 ~~~~~~---~~~--~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~--~~~~~~~~~~~--------------- 153 (320)
++.... .+. .|...+.++++.| +++.|++++.|+.|++||+.++. ....+..+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 158 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLP--DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 158 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECT--TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcC--CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEE
Confidence 765332 222 6888898888854 68899999999999999998876 44444433321
Q ss_pred ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961 154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVS 233 (320)
Q Consensus 154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 233 (320)
...++.|++||+++++....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.... .+..++|+|+
T Consensus 159 ~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~---~v~~~~~s~~ 235 (337)
T 1gxr_A 159 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS---QIFSLGYCPT 235 (337)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS---CEEEEEECTT
T ss_pred EeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC---ceEEEEECCC
Confidence 1357899999999999999999999999999999999999999999999999999988776665433 3578999999
Q ss_pred CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
+++|++++.++.|++||....... .+..|...|.+++|+|++++|++++.|+.|++|+....
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 999999999999999998876554 57889999999999999999999999999999997543
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-36 Score=265.98 Aligned_cols=254 Identities=15% Similarity=0.174 Sum_probs=208.3
Q ss_pred EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEE
Q psy14961 13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCA 90 (320)
Q Consensus 13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~ 90 (320)
..+..|...|.+++|+|++++|++|+.||.|++|++.. ........+..|...|.++.|+++ +.+|++++.||.|+
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG--ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEET--TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCC--CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 34567899999999999999999999999999999852 223344567789999999999866 89999999999999
Q ss_pred EEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCC
Q psy14961 91 LWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTG 168 (320)
Q Consensus 91 iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 168 (320)
+||+.+++ .+..+..|...+.++++.|...+..|++++.|+.|++||++.+...
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~------------------------ 138 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT------------------------ 138 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC------------------------
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce------------------------
Confidence 99999886 6677788999999998866533789999999999999999765311
Q ss_pred eeeeeecCCCCCeEEEEEcC-------------CCCEEEEeeCCCeEEEEECCCCeeE----eEEecCcceeeeEEEEEe
Q psy14961 169 YCVQSFEGHQSDVNSVKFHP-------------SGDAVATGSDDATCRLFDLRADKEV----ACYKKDSILFGATSVDFS 231 (320)
Q Consensus 169 ~~~~~~~~~~~~v~~v~~~p-------------~g~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~s 231 (320)
....+.+|...|.+++|+| ++.+|++++.|+.|++||++.+... ..+..+. ..+.+++|+
T Consensus 139 -~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~--~~v~~~~~s 215 (379)
T 3jrp_A 139 -SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWS 215 (379)
T ss_dssp -CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEEC
T ss_pred -eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc--CcEeEEEEC
Confidence 1223456888999999999 6999999999999999999765432 2222222 246789999
Q ss_pred cC---CcEEEEEeCCCeEEEEcCCCCe-----EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 232 VS---GRLLFAGYNDYTINVWDSLKCC-----RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 232 ~~---~~~l~~g~~dg~v~~wd~~~~~-----~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
|+ +.+|++|+.||.|++||+.... .+.....|...|++++|+|++++|++++.|+.|++|+...
T Consensus 216 p~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 216 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 99 8999999999999999987642 2223345889999999999999999999999999999753
No 59
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.6e-37 Score=269.88 Aligned_cols=276 Identities=14% Similarity=0.142 Sum_probs=203.1
Q ss_pred ccceEEEEEcCCCCEEEEecCC-------CeEEEEEecccCCccc------ccccccccccCeEEEEecCCCCEEEEE--
Q psy14961 19 ATWVMACAYAPSGSVVASGGLD-------NKVTVYAIALEDDSSA------KKKTVATHTSFISCCIFPNSDQQILTG-- 83 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~d-------g~i~v~~~~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~l~s~-- 83 (320)
..+|++++|+||+++|++||.+ +.|++|+++....... ....+..|...+.++.+. +..+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 3579999999999999998754 3599999865432211 112355677778888764 4456554
Q ss_pred ---------eCCCeEEEEECCCccee----ee-----cccCccceeEEEEeeCCCCCEEEE--EeCCCeEEEEeCCCCcE
Q psy14961 84 ---------SGDCTCALWDVESSQLL----QS-----FHGHTGELMDLDLAPSETGNTFVS--GSSDKLVNIWDMRTGYC 143 (320)
Q Consensus 84 ---------~~dg~v~iwd~~~~~~~----~~-----~~~~~~~v~~~~~~~~~~~~~l~s--~~~dg~i~lwd~~~~~~ 143 (320)
+.|+.+++|++.+.... .. ...+...+..++| +|||+++++ ++.|+.|++||++++++
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f--SpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI--SREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE--CTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE--cCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 45788999998654211 11 1123344666666 557888764 45789999999999988
Q ss_pred EEEeccCCcc-------------ccCCCeEEEEECcCCeeee--eecCCCCCeEEEEEcCCCCEEEEeeCCC----eEEE
Q psy14961 144 VQSFEGHHNL-------------ITDDKLVNIWDMRTGYCVQ--SFEGHQSDVNSVKFHPSGDAVATGSDDA----TCRL 204 (320)
Q Consensus 144 ~~~~~~~~~~-------------~~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~v~~~p~g~~l~s~s~dg----~i~i 204 (320)
+..+..+..+ ...++.+.+|+..++.... ...+|...|.+++|+|++..+++++.|+ .+++
T Consensus 170 ~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 170 KFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 8776533221 1235567788887776553 3466888999999999999999999887 6888
Q ss_pred EECCCCeeEeE--EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEE
Q psy14961 205 FDLRADKEVAC--YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSS 281 (320)
Q Consensus 205 wd~~~~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s 281 (320)
|++........ .........+.+++|+|+|++||+|+.|++|+|||+.+++++.++ .+|..+|++|+|||||++|||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 99876543221 111111234688999999999999999999999999999988875 689999999999999999999
Q ss_pred ecCCCceEeeecchHhh
Q psy14961 282 GSWDTTLRDEESKNRYV 298 (320)
Q Consensus 282 ~s~D~~ir~~~~~~~~~ 298 (320)
||.|++||+|+....+.
T Consensus 330 ~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 330 VSAANTIHIIKLPLNYA 346 (365)
T ss_dssp EETTSEEEEEECCTTTT
T ss_pred EeCCCeEEEEEcCCCCc
Confidence 99999999999855443
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-37 Score=274.24 Aligned_cols=270 Identities=15% Similarity=0.196 Sum_probs=204.9
Q ss_pred EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
..+...|++++|+|++++|++|+.|+.|++|++... .......+.+|...|.++.|++++++|++++.|++|++||+.
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN--GWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT--EEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC--ceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 345678999999999999999999999999998632 113455677899999999999999999999999999999998
Q ss_pred Ccc---eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc---EEEEecc-CCccc--------------
Q psy14961 96 SSQ---LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY---CVQSFEG-HHNLI-------------- 154 (320)
Q Consensus 96 ~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~---~~~~~~~-~~~~~-------------- 154 (320)
+++ ....+..|...|.+++++| +++.|++++.|+.|++||++.+. ....+.+ |...+
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSP--NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCT--TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECC--CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 876 5667778999999888855 68899999999999999998876 2455544 43221
Q ss_pred -cCCCeEEEEECc------------------CCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee---
Q psy14961 155 -TDDKLVNIWDMR------------------TGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE--- 212 (320)
Q Consensus 155 -~~d~~i~iwd~~------------------~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--- 212 (320)
+.|+.|++||++ .++++..+ +|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 358899999985 35566667 8999999999999999999999999999999988765
Q ss_pred -EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe------------------------------------
Q psy14961 213 -VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC------------------------------------ 255 (320)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~------------------------------------ 255 (320)
+..+..+. ..+.+++|+|++++|++|+.++.+ +|+.....
T Consensus 243 ~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (377)
T 3dwl_C 243 ALITVKLSQ--LPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA 319 (377)
T ss_dssp ECCCEECSS--SCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------
T ss_pred eeEeecCCC--CceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccc
Confidence 33333332 236789999999999999877766 66543110
Q ss_pred ---EEEE-------------eecCCCceeEEEECcCC-C---eEEEecCCCceEeeec
Q psy14961 256 ---RVNH-------------LMGHENRVSCLQVSPDG-T---AFSSGSWDTTLRDEES 293 (320)
Q Consensus 256 ---~~~~-------------~~~h~~~i~~i~~s~~~-~---~l~s~s~D~~ir~~~~ 293 (320)
.... ...|.+.|++|++.++. . .|+|||.||+|++|+.
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 320 LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0000 01399999999977643 3 6999999999999984
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.8e-37 Score=274.91 Aligned_cols=265 Identities=17% Similarity=0.314 Sum_probs=216.2
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee
Q psy14961 22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ 101 (320)
Q Consensus 22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 101 (320)
+++++|+|++++|++++.|+.+++|++... .....+..| ..+.+..+++++++|++|+.||.|++||+.+++...
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~----~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 133 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIR----DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE 133 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSE----ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEeccc----ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee
Confidence 447899999999999999999999997532 222333444 455566788999999999999999999999999888
Q ss_pred ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECc
Q psy14961 102 SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMR 166 (320)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~ 166 (320)
.+.+|.+.|.+++++| +++.|++++.|+.|++||+.+++.+..+.+|...+ +.|+.|++||++
T Consensus 134 ~~~~h~~~v~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFP--SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp ETTSSSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred ecccccCccEEEEECC--CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 8889999999998865 68899999999999999999988877776665432 358899999999
Q ss_pred CCeeeeeecC---CCCCeEEE---------------------EEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961 167 TGYCVQSFEG---HQSDVNSV---------------------KFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222 (320)
Q Consensus 167 ~~~~~~~~~~---~~~~v~~v---------------------~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 222 (320)
+++++..+.. |...|.++ +|+|++++|++++.||.|++||+++++......... .
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~ 290 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF-T 290 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT-S
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc-C
Confidence 9998888765 33445554 457899999999999999999999887765554321 2
Q ss_pred eeeEEEEEecCCc-EEEEEeCCCeEEEEcCCCCe-EEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 223 FGATSVDFSVSGR-LLFAGYNDYTINVWDSLKCC-RVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 223 ~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~~~-~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
..+.+++|+|++. +|++|+.||.|++||+.+.. ++..+.+ |...|+++.| |++++|++++.|++|++|+...
T Consensus 291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence 2468899999999 99999999999999998764 3566666 6778888865 5788999999999999999755
No 62
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.1e-35 Score=266.80 Aligned_cols=275 Identities=21% Similarity=0.358 Sum_probs=228.5
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEec--CCCC
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP--NSDQ 78 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~ 78 (320)
|++||..+++....+..|...|.+++|+|++ +|++|+.||.|++||+.. ......+.+|...|.++.|. +++.
T Consensus 144 i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~ 218 (464)
T 3v7d_B 144 IRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK----GCCTHVFEGHNSTVRCLDIVEYKNIK 218 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT----TEEEEEECCCSSCEEEEEEEESSSCE
T ss_pred EEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC----CcEEEEECCCCCccEEEEEecCCCCC
Confidence 5799999999988888899999999999988 999999999999999853 23445677899999999986 5678
Q ss_pred EEEEEeCCCeEEEEECCCcce-----------------------eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEE
Q psy14961 79 QILTGSGDCTCALWDVESSQL-----------------------LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNI 135 (320)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~l 135 (320)
.+++|+.||+|++||+.++.. +..+.+|...+.++. ++++.+++++.|+.|++
T Consensus 219 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~~d~~i~v 294 (464)
T 3v7d_B 219 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS----GHGNIVVSGSYDNTLIV 294 (464)
T ss_dssp EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE----EETTEEEEEETTSCEEE
T ss_pred EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc----CCCCEEEEEeCCCeEEE
Confidence 899999999999999987642 345667777776653 34789999999999999
Q ss_pred EeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC
Q psy14961 136 WDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA 200 (320)
Q Consensus 136 wd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg 200 (320)
||+++++++..+.+|...+ +.|+.|++||+++++++..+.+|...|.+++|+ +++|++++.||
T Consensus 295 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg 372 (464)
T 3v7d_B 295 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADG 372 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTS
T ss_pred EECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCC
Confidence 9999999888887665432 358899999999999999999999999999998 57999999999
Q ss_pred eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEE-eecCCCceeEEEECcCCCeE
Q psy14961 201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNH-LMGHENRVSCLQVSPDGTAF 279 (320)
Q Consensus 201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~-~~~h~~~i~~i~~s~~~~~l 279 (320)
.|++||+++.+......... ....+.|+|++.++++|+ ||.|++||..+++.+.. +.+|...|.+++|+ +..++
T Consensus 373 ~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~ 447 (464)
T 3v7d_B 373 SIRGWDANDYSRKFSYHHTN---LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLV 447 (464)
T ss_dssp EEEEEETTTCCEEEEEECTT---CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEE
T ss_pred cEEEEECCCCceeeeecCCC---CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEE
Confidence 99999999877655544332 235678999999999999 89999999999888875 67889999999997 44556
Q ss_pred EEecCCCceEee
Q psy14961 280 SSGSWDTTLRDE 291 (320)
Q Consensus 280 ~s~s~D~~ir~~ 291 (320)
++++.|+.+.+|
T Consensus 448 ~~~~~~g~~~i~ 459 (464)
T 3v7d_B 448 AAVEKDGQSFLE 459 (464)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEeCCeEEEE
Confidence 666677765544
No 63
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.4e-36 Score=267.73 Aligned_cols=253 Identities=32% Similarity=0.640 Sum_probs=206.9
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEecCC-
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIFPNS- 76 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~- 76 (320)
|+|||..+++....+..|..+|.+++|+|++++|++|+.|+.+++|++..... .......+.+|...+.++.|.++
T Consensus 90 v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~ 169 (380)
T 3iz6_a 90 LIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ 169 (380)
T ss_dssp EEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS
T ss_pred EEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCC
Confidence 57999999999888889999999999999999999999999999999853221 11233456789999999999775
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeec-----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-CCcEEEEeccC
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSF-----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-TGYCVQSFEGH 150 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-~~~~~~~~~~~ 150 (320)
+..|++|+.|++|++||+.+++.+..+ .+|...|.++.+.+. +++.|++|+.|+.|++||++ .+..+..+.+|
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL-NANMFISGSCDTTVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS-SCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC-CCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence 457999999999999999999887666 578888988887643 57899999999999999997 44666666666
Q ss_pred Cccc---------------cCCCeEEEEECcCCeeeeeecCCC-------CCeEEEEEcCCCCEEEEeeCCCeEEEEECC
Q psy14961 151 HNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQ-------SDVNSVKFHPSGDAVATGSDDATCRLFDLR 208 (320)
Q Consensus 151 ~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~-------~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~ 208 (320)
...+ +.|+.|++||++++.++..+..+. ..|.+++|+|+|++|++|+.||.|++||+.
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 5432 368999999999998887775543 248999999999999999999999999998
Q ss_pred CCeeEeEEec--CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 209 ADKEVACYKK--DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
.++....... ......+.+++|+|+|.+|++|+.|++|++|++...
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 8776654421 111224678999999999999999999999997654
No 64
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.8e-36 Score=265.06 Aligned_cols=238 Identities=15% Similarity=0.195 Sum_probs=186.5
Q ss_pred EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC
Q psy14961 15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV 94 (320)
Q Consensus 15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 94 (320)
...|...|.+++|+|++. +++++.||.|++||+...+..........+|...|.++.|++++++|++|+.|++|++||+
T Consensus 90 ~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp EEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred cCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 345778899999999986 5567789999999986433222222234579999999999999999999999999999999
Q ss_pred CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe--------------ccC-Cc-cc--cC
Q psy14961 95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF--------------EGH-HN-LI--TD 156 (320)
Q Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~--------------~~~-~~-~~--~~ 156 (320)
++++++..+.+|...|.++++.+.. ...+++++.|+.|++||+++++....+ .+. .. ++ ..
T Consensus 169 ~~~~~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 169 SQKAVLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCcEEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 9999999999999999999886643 247899999999999999876543322 111 11 11 46
Q ss_pred CCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec-CC
Q psy14961 157 DKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV-SG 234 (320)
Q Consensus 157 d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~ 234 (320)
|+.|++||+++++++..+.+|...|.+++|+|++ ++|++|+.|++|+|||+++++.+....+.. .+.+++|+| ++
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~---~V~~vafsP~d~ 324 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRD---FVTGVAWSPLDH 324 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSS---CEEEEEECSSST
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCC---CEEEEEEeCCCC
Confidence 8899999999999999999999999999999987 578999999999999999887765443322 367899998 79
Q ss_pred cEEEEEeCCCeEEEEcCCCCeEE
Q psy14961 235 RLLFAGYNDYTINVWDSLKCCRV 257 (320)
Q Consensus 235 ~~l~~g~~dg~v~~wd~~~~~~~ 257 (320)
.+|++|+.||+|++||+.+..+.
T Consensus 325 ~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 325 SKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp TEEEEEETTSCEEEEECC-----
T ss_pred CEEEEEcCCCeEEEEECCCCCcc
Confidence 99999999999999998654333
No 65
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.6e-36 Score=261.71 Aligned_cols=269 Identities=15% Similarity=0.224 Sum_probs=220.2
Q ss_pred eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC-EEEEEeCCCeEEEEEC-
Q psy14961 17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ-QILTGSGDCTCALWDV- 94 (320)
Q Consensus 17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~- 94 (320)
.|...|.+++|+|++++|++++.|+.|++|++...... .....+..|...|.++.|+++++ .+++|+.||.|++||+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN-VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE-EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc-ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 57789999999999999999999999999998643211 12334558999999999999999 9999999999999999
Q ss_pred CCcceeeeccc--CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC---------CcEEEEec-----------cCC-
Q psy14961 95 ESSQLLQSFHG--HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT---------GYCVQSFE-----------GHH- 151 (320)
Q Consensus 95 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~---------~~~~~~~~-----------~~~- 151 (320)
++++. ..+.. |...|.++++.+ ++.|++++.|+.|++||+++ ++++..+. +..
T Consensus 88 ~~~~~-~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 163 (342)
T 1yfq_A 88 GSPSF-QALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL 163 (342)
T ss_dssp SSSSE-EECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred cCCce-EeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcE
Confidence 77755 66778 999999998876 67999999999999999876 54332222 111
Q ss_pred ccccCCCeEEEEECcC-Ce--eeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCC------eeEeEEecCcc
Q psy14961 152 NLITDDKLVNIWDMRT-GY--CVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRAD------KEVACYKKDSI 221 (320)
Q Consensus 152 ~~~~~d~~i~iwd~~~-~~--~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~------~~~~~~~~~~~ 221 (320)
...+.++.|++||+++ +. .......|...|.+++|+| +++++++++.||.+++|+++.. +....+..+..
T Consensus 164 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred EEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 1124688999999988 54 2334456888999999999 9999999999999999999876 44444444322
Q ss_pred -------eeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-CCceeEEEECcCCCeEEEecCCCc-eEeee
Q psy14961 222 -------LFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-ENRVSCLQVSPDGTAFSSGSWDTT-LRDEE 292 (320)
Q Consensus 222 -------~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-~~~i~~i~~s~~~~~l~s~s~D~~-ir~~~ 292 (320)
...+.+++|+|++++|++|+.||.|++||..++..+..+.+| ..+|.+++ |++++|++||.|++ .+.++
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 125678999999999999999999999999999999999998 99999999 99999999999998 55555
No 66
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-37 Score=280.98 Aligned_cols=235 Identities=13% Similarity=0.053 Sum_probs=181.1
Q ss_pred EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC------CCEEEEEeCCCeEEEEECCCcce-------
Q psy14961 33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS------DQQILTGSGDCTCALWDVESSQL------- 99 (320)
Q Consensus 33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~dg~v~iwd~~~~~~------- 99 (320)
.+++++.|+.|+||++............+..|.+.|.++.|+++ ++.|++++.||+|++||+.++..
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 34446688999999986432211112335567788999999875 57899999999999999976532
Q ss_pred ----eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 100 ----LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 100 ----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
...+.+|...|.+++|++ + ..|++|+.||.|++||++++. .+...+.
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~--~-~~lasgs~DgtV~lWD~~~~~--------------------------~~~~~~~ 305 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLS--P-TTVVCGFKNGFVAEFDLTDPE--------------------------VPSFYDQ 305 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESS--S-SEEEEEETTSEEEEEETTBCS--------------------------SCSEEEE
T ss_pred ecCceEEEEcCCCCEEEEEecC--C-CeEEEEeCCCEEEEEECCCCC--------------------------CceEEee
Confidence 235678889999998864 2 489999999999999997542 1223456
Q ss_pred CCCCCeEEE--EEcCCC-CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961 176 GHQSDVNSV--KFHPSG-DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252 (320)
Q Consensus 176 ~~~~~v~~v--~~~p~g-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~ 252 (320)
+|...|.++ +|+|+| .+||||+.|++|+|||+++++....+..+.....+.+++|+|+++.+++++.|++|++||+.
T Consensus 306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~ 385 (524)
T 2j04_B 306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR 385 (524)
T ss_dssp CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETT
T ss_pred cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECc
Confidence 799999999 578887 89999999999999999876644333222111124678999999999999999999999998
Q ss_pred CCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 253 ~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
....+.++.+|.+.|++|+|||+|++|+|||.|++||+|+....
T Consensus 386 ~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 386 AAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred ccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 88777788899999999999999999999999999999996443
No 67
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.9e-35 Score=262.65 Aligned_cols=266 Identities=27% Similarity=0.487 Sum_probs=224.0
Q ss_pred eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEE
Q psy14961 11 KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCA 90 (320)
Q Consensus 11 ~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 90 (320)
....+..|...|..+ +++++++|++|+.||.|++||+.. ......+.+|...|.++.|. ++.+++|+.||+|+
T Consensus 110 ~~~~l~~h~~~v~~~-~~~~g~~l~sg~~dg~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 110 SPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVT----GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLK 182 (445)
T ss_dssp CCEEEECSTTSCEEE-EEEETTEEEEEETTSCEEEEETTT----CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred eeEEecccCCCcEEE-EEEcCCEEEEEECCCcEEEEECCC----CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEE
Confidence 334456677765432 566789999999999999999852 23445677899999999996 56999999999999
Q ss_pred EEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc-------------cCC
Q psy14961 91 LWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI-------------TDD 157 (320)
Q Consensus 91 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~-------------~~d 157 (320)
+||+.+++.+..+.+|...|.++.+. ++.+++|+.||.|++||+.+++.+..+.+|...+ +.|
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~----~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 258 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLH----EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD 258 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred EEECCcCcEEEEECCCCCcEEEEEec----CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCC
Confidence 99999999999999999999988773 4689999999999999999998888777665432 368
Q ss_pred CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEE
Q psy14961 158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLL 237 (320)
Q Consensus 158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 237 (320)
+.|++||+++++++..+.+|...|.+++| ++.++++++.|+.|++||+++++.+..+..+... +.. +.+++.++
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--v~~--~~~~~~~l 332 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL--TSG--MELKDNIL 332 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSC--EEE--EEEETTEE
T ss_pred CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCccc--EEE--EEEeCCEE
Confidence 99999999999999999999999999999 6889999999999999999998877666544321 233 44568899
Q ss_pred EEEeCCCeEEEEcCCCCeEEEEeec---CCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 238 FAGYNDYTINVWDSLKCCRVNHLMG---HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 238 ~~g~~dg~v~~wd~~~~~~~~~~~~---h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
++|+.||.|++||..++..+..+.+ |..+|.+++|+ +++|++|+.|++|++|+..+
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCC
Confidence 9999999999999998888888876 88899999996 57999999999999999654
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=265.50 Aligned_cols=269 Identities=17% Similarity=0.280 Sum_probs=207.1
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC-------cccccccccccc------------cCeEEEEecCCC-
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD-------SSAKKKTVATHT------------SFISCCIFPNSD- 77 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~-------~~~~~~~~~~h~------------~~v~~~~~~~~~- 77 (320)
+...|++++|+|+|++|++|+.||.|++|++..... .......+.+|. ..|.++.|++++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 457999999999999999999999999999864321 111344567787 889999999987
Q ss_pred -CEEEEEeCCCeEEEEECCCccee---------------------------------------ee-cccCccceeEEEEe
Q psy14961 78 -QQILTGSGDCTCALWDVESSQLL---------------------------------------QS-FHGHTGELMDLDLA 116 (320)
Q Consensus 78 -~~l~s~~~dg~v~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~ 116 (320)
..+++++.|++|++||+.++... .. ..+|...|.+++++
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 78999999999999998764331 12 35789999999886
Q ss_pred eCCCCCEEEEEeCCCeEEEEeCCC-CcEEEE-------eccCCc--------------c--ccCCCeEEEEECcCCee--
Q psy14961 117 PSETGNTFVSGSSDKLVNIWDMRT-GYCVQS-------FEGHHN--------------L--ITDDKLVNIWDMRTGYC-- 170 (320)
Q Consensus 117 ~~~~~~~l~s~~~dg~i~lwd~~~-~~~~~~-------~~~~~~--------------~--~~~d~~i~iwd~~~~~~-- 170 (320)
+ +++.|++| .|+.|++||++. +..+.. +.+|.. + .+.|+.|++||++++..
T Consensus 187 ~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 187 S--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp T--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred C--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 5 68899998 799999999983 333331 222221 1 13688999999999876
Q ss_pred --eeeecCCCC------------CeEEEEEcCCCCEEEEeeCCCeEEEEECCC-CeeEeEEecCccee------------
Q psy14961 171 --VQSFEGHQS------------DVNSVKFHPSGDAVATGSDDATCRLFDLRA-DKEVACYKKDSILF------------ 223 (320)
Q Consensus 171 --~~~~~~~~~------------~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~------------ 223 (320)
...+.+|.. .|.+++|+|+|++|++++. +.|++||++. ++.+..+..+....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 677888876 8999999999999999998 9999999986 66655554432211
Q ss_pred -eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec---------------------------------CCCceeE
Q psy14961 224 -GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG---------------------------------HENRVSC 269 (320)
Q Consensus 224 -~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~---------------------------------h~~~i~~ 269 (320)
....++|+|++++|++|+.||.|++||+.+++.+ .+.+ +...|.+
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 1234899999999999999999999998877654 2332 3457899
Q ss_pred EEECcCCCeEEEecCCCceEeee
Q psy14961 270 LQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 270 i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
++|+|++++||+|+.|+ +.+|.
T Consensus 422 ~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 422 TAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp EEECSSSSEEEEECSSC-EEEEE
T ss_pred EEECCCCCEEEEEecce-eeeec
Confidence 99999999999999887 55554
No 69
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-35 Score=265.16 Aligned_cols=259 Identities=24% Similarity=0.448 Sum_probs=215.9
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS 97 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 97 (320)
+...|.++.| ++++|++|+.||.|++||+.. ......+.+|...|.++.| +++.+++|+.||+|++||+.++
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNT----LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSS----CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCC----CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 4456777766 789999999999999999752 2334567789999999998 6789999999999999999999
Q ss_pred ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE---EEeccCCccc-------------cCCCeEE
Q psy14961 98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV---QSFEGHHNLI-------------TDDKLVN 161 (320)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~---~~~~~~~~~~-------------~~d~~i~ 161 (320)
+.+..+..|...|.++++. ++.+++|+.||.|++||+.++... ..+.+|...+ +.|+.|+
T Consensus 204 ~~~~~~~~h~~~v~~l~~~----~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 279 (435)
T ss_dssp CEEEEECCCCSCEEEEECC----TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred cEEEEEcCCCCcEEEEEEc----CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEE
Confidence 9999999999999888763 469999999999999999877644 3444443322 4689999
Q ss_pred EEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY 241 (320)
Q Consensus 162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 241 (320)
+||+++++++..+.+|...|.+++++ ++++++|+.||.|++||+++++.+..+..+.. .+.+++| ++.+|++|+
T Consensus 280 vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~--~~~~l~sg~ 353 (435)
T 1p22_A 280 VWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRF--DNKRIVSGA 353 (435)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEC--CSSEEEEEE
T ss_pred EEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC--cEEEEEe--cCCEEEEEe
Confidence 99999999999999999999999995 67999999999999999999888776654433 2456666 889999999
Q ss_pred CCCeEEEEcCCCCe---------EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 242 NDYTINVWDSLKCC---------RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 242 ~dg~v~~wd~~~~~---------~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
.||.|++||..... .+..+.+|.+.|.+++| ++++|++|+.|++|++|+..+.
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 99999999975544 67788999999999999 7889999999999999997654
No 70
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.1e-35 Score=250.66 Aligned_cols=236 Identities=27% Similarity=0.473 Sum_probs=204.2
Q ss_pred cccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 58 KKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
...+.+|...|.++.|++++++|++|+.||.|++|++.+++....+.+|...|.++++.| ++++|++++.|+.|++||
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC--CCCEEEEECCCCEEEEEE
Confidence 445778999999999999999999999999999999999998888999999999988854 688999999999999999
Q ss_pred CCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeE
Q psy14961 138 MRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATC 202 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i 202 (320)
+++++++..+.+|...+ +.|+.|++||+++++++..+..|..+|.+++|+|++++|++++.||.|
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999888877665432 358899999999999999999999999999999999999999999999
Q ss_pred EEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCcee---EEEECcCCCeE
Q psy14961 203 RLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVS---CLQVSPDGTAF 279 (320)
Q Consensus 203 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~---~i~~s~~~~~l 279 (320)
++||+++++.+..+.... ...+..++|+|++++|++|+.|+.|++||+.+...+..+.+|...+. .....+++++|
T Consensus 174 ~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 252 (312)
T ss_dssp EEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEE
T ss_pred EEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEE
Confidence 999999887665543222 12356789999999999999999999999999998888888876543 33344689999
Q ss_pred EEecCCCceEeeecchH
Q psy14961 280 SSGSWDTTLRDEESKNR 296 (320)
Q Consensus 280 ~s~s~D~~ir~~~~~~~ 296 (320)
++|+.|++|++|+..+.
T Consensus 253 ~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 253 VSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp EECCTTSCEEEEETTTC
T ss_pred EEECCCCEEEEEECCCc
Confidence 99999999999997543
No 71
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-35 Score=254.90 Aligned_cols=250 Identities=18% Similarity=0.295 Sum_probs=185.2
Q ss_pred CeEeecccce--eEEEE-Ee-CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC---cccccccccccccCeEEEEe
Q psy14961 1 MIIWDGLTQT--KEHSV-TM-PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD---SSAKKKTVATHTSFISCCIF 73 (320)
Q Consensus 1 ~~~W~~~~~~--~~~~~-~~-~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~---~~~~~~~~~~h~~~v~~~~~ 73 (320)
|+|||..++. ....+ .. |...|.+++|+|++++|++|+.|+.|++|++..... .......+.+|...|.++.|
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 115 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW 115 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEE
Confidence 5799998653 33333 22 788999999999999999999999999999843211 12234457789999999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCC----cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC--cEEEEe
Q psy14961 74 PNSDQQILTGSGDCTCALWDVES----SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG--YCVQSF 147 (320)
Q Consensus 74 ~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~--~~~~~~ 147 (320)
++++++|++|+.|++|++||+.. .+++..+.+|...|.+++|+| ++.+|++++.|+.|++||...+ .++..+
T Consensus 116 sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 116 SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP--SEALLASSSYDDTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS--SSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC--CCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence 99999999999999999999943 245677889999999998865 5789999999999999998766 456666
Q ss_pred ccCCcc-----------------ccCCCeEEEEECcCC--------eeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCe
Q psy14961 148 EGHHNL-----------------ITDDKLVNIWDMRTG--------YCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDAT 201 (320)
Q Consensus 148 ~~~~~~-----------------~~~d~~i~iwd~~~~--------~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~ 201 (320)
.+|... .+.|+.|++||++.+ .+...+.+ |...|.+++|+|++ .|++++.||.
T Consensus 194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~ 272 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV 272 (330)
T ss_dssp CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC
T ss_pred cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE
Confidence 555422 136889999998764 34455555 89999999999765 7999999999
Q ss_pred EEEEECCCCee--EeEEecCcceeeeEEEEEec--CCcEEEEEeCCCeEEEEcCCC
Q psy14961 202 CRLFDLRADKE--VACYKKDSILFGATSVDFSV--SGRLLFAGYNDYTINVWDSLK 253 (320)
Q Consensus 202 i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~~ 253 (320)
|++||..+++. ............+..++|+| ++++|++|+.||+|++||+..
T Consensus 273 v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 273 LAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99999887642 21111111112467899999 789999999999999999754
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.7e-35 Score=294.40 Aligned_cols=277 Identities=23% Similarity=0.406 Sum_probs=240.2
Q ss_pred EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961 14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93 (320)
Q Consensus 14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 93 (320)
.+..|...|++++|+|+|++|++|+.||.|++|++.. ......+.+|...|.++.|+++++++++++.||.|++||
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAET----GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCC----CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 3456888999999999999999999999999999853 234456778999999999999999999999999999999
Q ss_pred CCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCC
Q psy14961 94 VESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDK 158 (320)
Q Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~ 158 (320)
+.+++.+..+.+|...|.++++.+..++..+++|+.|+.|++||+.++.++..+.+|...+ +.|+
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 9999999999999999999999887677899999999999999999999888877765433 3588
Q ss_pred eEEEEECcCCeeeeeecC-------------CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961 159 LVNIWDMRTGYCVQSFEG-------------HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA 225 (320)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~-------------~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 225 (320)
.|++||++++.....+.. +...+.+++|+|+|+.+++++ ++.+.+||+.++.......... ...+
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~-~~~v 843 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGH-HSTI 843 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSS-SSCC
T ss_pred eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCC-CCce
Confidence 999999998877665432 233688999999999999887 6899999999887765554221 2246
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
.+++|+|++.++++|+.+|.|++||..++..+..+.+|...|.+++|+|+|++|++++.|++|++|+....
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHH
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999997553
No 73
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1e-34 Score=251.14 Aligned_cols=246 Identities=23% Similarity=0.408 Sum_probs=200.8
Q ss_pred CeEeecccc-----eeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961 1 MIIWDGLTQ-----TKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN 75 (320)
Q Consensus 1 ~~~W~~~~~-----~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 75 (320)
|++|+.... .....+..|...|.+++|+|++++|++|+.|++|++||+.. ......+.+|...|.++.|++
T Consensus 42 v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~----~~~~~~~~~h~~~v~~~~~~~ 117 (319)
T 3frx_A 42 LISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT----GETYQRFVGHKSDVMSVDIDK 117 (319)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEECT
T ss_pred EEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC----CCeeEEEccCCCcEEEEEEcC
Confidence 479987642 23345667889999999999999999999999999999853 234456788999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCC----CCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961 76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE----TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH 151 (320)
Q Consensus 76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~ 151 (320)
++..+++|+.|++|++||+. ++.+..+.+|...+.++.+.|.. ++..+++++.|+.|++||++.++....+.+|.
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~ 196 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN 196 (319)
T ss_dssp TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC
T ss_pred CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC
Confidence 99999999999999999986 55667788899999999887642 45689999999999999999988877776665
Q ss_pred ccc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE
Q psy14961 152 NLI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY 216 (320)
Q Consensus 152 ~~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~ 216 (320)
..+ +.|+.|++||+++++++..+..+ .+|.+++|+|++.++++++.+ .+++|++.....+...
T Consensus 197 ~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 197 SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDL 274 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeecc
Confidence 432 36899999999999998888754 689999999999999888755 5999999876655443
Q ss_pred ecCc------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961 217 KKDS------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK 253 (320)
Q Consensus 217 ~~~~------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~ 253 (320)
.... ....+.+++|+|+|++|++|+.||.|++||+.+
T Consensus 275 ~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 275 RPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp CCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 3211 112356899999999999999999999999653
No 74
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.6e-34 Score=277.75 Aligned_cols=274 Identities=19% Similarity=0.323 Sum_probs=232.5
Q ss_pred EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961 13 HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW 92 (320)
Q Consensus 13 ~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 92 (320)
..+..|...|.+++|+|++++|++|+.||.|++||+.. ......+..|...|.++.|+++++.|++++.||.|++|
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYET----QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCC----CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 45567889999999999999999999999999999742 23445677899999999999999999999999999999
Q ss_pred ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC-cEEEEeccCCcc----------------cc
Q psy14961 93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-YCVQSFEGHHNL----------------IT 155 (320)
Q Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~-~~~~~~~~~~~~----------------~~ 155 (320)
|+.+++.+..+.+|.+.|.+++|+| ++..|++++.||.|++||+.++ .....+.+|... .+
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECS--SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeC--CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 9999999999999999999988855 6889999999999999999876 444455444322 13
Q ss_pred CCCeEEEEECcCCeeeeeecCCC-CCeEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec
Q psy14961 156 DDKLVNIWDMRTGYCVQSFEGHQ-SDVNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV 232 (320)
Q Consensus 156 ~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 232 (320)
.|+.|++||++++.....+..+. ..+.+++|+| ++.++++++.||.|++||+++++.+..+..+.. .+..++|+|
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~--~v~~~~~~~ 238 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS--NVSFAVFHP 238 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS--CEEEEEECS
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcC
Confidence 58899999999888777776555 8899999999 899999999999999999999887766654432 357899999
Q ss_pred CCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCe-EEEecCCCceEeeecc
Q psy14961 233 SGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA-FSSGSWDTTLRDEESK 294 (320)
Q Consensus 233 ~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~-l~s~s~D~~ir~~~~~ 294 (320)
++.+|++|+.||.|++||..++..+..+..|...|.+++|+|+++. +++++.|+.+.+|+..
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 9999999999999999999998899899999999999999999874 2455556777777753
No 75
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=252.07 Aligned_cols=236 Identities=24% Similarity=0.383 Sum_probs=190.4
Q ss_pred cccccccccc-CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee---ecccCccceeEEEEeeCCCCCEEEEEeCCCe
Q psy14961 57 KKKTVATHTS-FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ---SFHGHTGELMDLDLAPSETGNTFVSGSSDKL 132 (320)
Q Consensus 57 ~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~ 132 (320)
....+.+|.. .|.++.|++++++|++|+.|++|++||++++.... ...+|...|.+++|+| ++++|++|+.|+.
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP--CGNYLASASFDAT 84 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT--TSSEEEEEETTSC
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC--CCCEEEEEECCCc
Confidence 3445677876 89999999999999999999999999998765332 2367999999998854 6899999999999
Q ss_pred EEEEeCCCCc--EEEEeccCCccc---------------cCCCeEEEEECcCC---eeeeeecCCCCCeEEEEEcCCCCE
Q psy14961 133 VNIWDMRTGY--CVQSFEGHHNLI---------------TDDKLVNIWDMRTG---YCVQSFEGHQSDVNSVKFHPSGDA 192 (320)
Q Consensus 133 i~lwd~~~~~--~~~~~~~~~~~~---------------~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~v~~~p~g~~ 192 (320)
+++||+..+. ++..+.+|...+ +.|+.|++||++++ .++..+.+|...|.+++|+|++++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 9999987763 566676665432 35899999999775 456678899999999999999999
Q ss_pred EEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC---------------CeEE
Q psy14961 193 VATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK---------------CCRV 257 (320)
Q Consensus 193 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~---------------~~~~ 257 (320)
|++++.|++|++||.+.++.............+.+++|+|+|++|++|+.|++|++||... ...+
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 9999999999999998775432222211123468899999999999999999999998421 1223
Q ss_pred EEeec-CCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 258 NHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 258 ~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
..+.+ |...|.+++|+|++..|++++.|++||+|+..
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 34444 88999999999999999999999999999864
No 76
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6e-34 Score=253.39 Aligned_cols=244 Identities=20% Similarity=0.399 Sum_probs=196.7
Q ss_pred CeEeecccceeEEEEEeC------------------ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc
Q psy14961 1 MIIWDGLTQTKEHSVTMP------------------ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA 62 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~------------------~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~ 62 (320)
++||+..+++....+..+ ..+|.+++|+|+|++|++|+.|+.|++||+.. ......+.
T Consensus 87 v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~----~~~~~~~~ 162 (393)
T 1erj_A 87 TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN----RKIVMILQ 162 (393)
T ss_dssp EEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTT----TEEEEEEC
T ss_pred EEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCC----CcEEEEEc
Confidence 368999887766554322 12599999999999999999999999999852 23345677
Q ss_pred ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961 63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY 142 (320)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~ 142 (320)
+|...|.++.|+++++.|++++.|++|++||+.+++....+. +...+.+++++|. ++++|++|+.|+.|++||++++.
T Consensus 163 ~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~-~~~~l~~~s~d~~v~iwd~~~~~ 240 (393)
T 1erj_A 163 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG-DGKYIAAGSLDRAVRVWDSETGF 240 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST-TCCEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC-CCCEEEEEcCCCcEEEEECCCCc
Confidence 899999999999999999999999999999999988776665 5567877877653 67899999999999999999888
Q ss_pred EEEEe-------ccCCccc---------------cCCCeEEEEECcCC------------eeeeeecCCCCCeEEEEEcC
Q psy14961 143 CVQSF-------EGHHNLI---------------TDDKLVNIWDMRTG------------YCVQSFEGHQSDVNSVKFHP 188 (320)
Q Consensus 143 ~~~~~-------~~~~~~~---------------~~d~~i~iwd~~~~------------~~~~~~~~~~~~v~~v~~~p 188 (320)
.+..+ .+|...+ +.|+.|++||+++. .+...+.+|...|.+++|+|
T Consensus 241 ~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 320 (393)
T 1erj_A 241 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ 320 (393)
T ss_dssp EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG
T ss_pred EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC
Confidence 76655 2332221 35899999998753 34567789999999999999
Q ss_pred CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEec------CCcEEEEEeCCCeEEEEcCC
Q psy14961 189 SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSV------SGRLLFAGYNDYTINVWDSL 252 (320)
Q Consensus 189 ~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~------~~~~l~~g~~dg~v~~wd~~ 252 (320)
++.+|++|+.|+.|++||+.+++.+..+..+.. .+.+++|++ ++.+|++|+.||+|++|+..
T Consensus 321 ~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~--~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 321 NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN--SVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp GGCEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC--CEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 999999999999999999999888776655433 356777765 78999999999999999854
No 77
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.2e-33 Score=248.15 Aligned_cols=278 Identities=12% Similarity=0.122 Sum_probs=197.0
Q ss_pred EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE-E
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI-L 81 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~ 81 (320)
||...+.+.+.....|...|.+++|+|||++|++|+.++ +++|++... ... ...+...+..+.+.++++.+ +
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~ 75 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV----AHI--MSQEMRHLSKVRMLHRTNYVAF 75 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE----EEE--EEEECSCCCEEEECTTSSEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc----cee--eeeecCCeEEEEEcCCCCEEEE
Confidence 566555555555567889999999999999999998765 789997521 111 11222346677777777766 5
Q ss_pred EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC-cEEEEec---------cCC
Q psy14961 82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-YCVQSFE---------GHH 151 (320)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~-~~~~~~~---------~~~ 151 (320)
+++.|++|++||+.+++++..+. +...|.++.+.+ +.++++ .|+.|++||+.++ +.+..+. ...
T Consensus 76 ~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~----~~~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~ 149 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR----EFIVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGL 149 (355)
T ss_dssp ECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECS----SEEEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTE
T ss_pred EECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcC----CEEEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccE
Confidence 67888999999999999888776 667888877643 345544 4789999999887 3322221 111
Q ss_pred cc---ccCCCeEEEEECcCCe----------------eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCe-EEEEECCCCe
Q psy14961 152 NL---ITDDKLVNIWDMRTGY----------------CVQSFEGHQSDVNSVKFHPSGDAVATGSDDAT-CRLFDLRADK 211 (320)
Q Consensus 152 ~~---~~~d~~i~iwd~~~~~----------------~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~-i~iwd~~~~~ 211 (320)
.. ...++.|++||++++. ++..+.+|...|.+++|+|+|++|++|+.|++ |++||+++++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 11 2468999999998765 26788999999999999999999999999998 9999999998
Q ss_pred eEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE--EEEe---------------------ecCCCcee
Q psy14961 212 EVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR--VNHL---------------------MGHENRVS 268 (320)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~--~~~~---------------------~~h~~~i~ 268 (320)
.+..+........+.+++|+|++++|++|+.|++|++||+..... ...+ .++..+..
T Consensus 230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 887776211123468899999999999999999999999765321 1111 01122347
Q ss_pred EEEECcCCCeEEEecCCCceEeeec
Q psy14961 269 CLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 269 ~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.++|+||+++|++++.||.+++|+.
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 7999999999999999999999985
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.5e-33 Score=272.44 Aligned_cols=285 Identities=24% Similarity=0.358 Sum_probs=232.7
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|+|||..+++....+..|...|.+++|+|++++|++|+.||.|++|++.. ......+..|...|.++.|+++++.|
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l 112 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT----GEKVVDFEAHPDYIRSIAVHPTKPYV 112 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT----CCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC----CcEEEEEecCCCCEEEEEEeCCCCEE
Confidence 47999999998888888999999999999999999999999999999853 23345667899999999999999999
Q ss_pred EEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC--------
Q psy14961 81 LTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH-------- 151 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~-------- 151 (320)
++++.||.|++||+.++ .....+.+|...+.+++|+|. +++.|++++.||.|++||+..+.....+..+.
T Consensus 113 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~ 191 (814)
T 3mkq_A 113 LSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK-DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVD 191 (814)
T ss_dssp EEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT-EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEE
T ss_pred EEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEE
Confidence 99999999999999886 666778889999999988762 46799999999999999998765544433221
Q ss_pred -------c---cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc
Q psy14961 152 -------N---LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI 221 (320)
Q Consensus 152 -------~---~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 221 (320)
. ....++.|++||++++.+...+.+|...|.+++|+|++.++++++.||.|++||+.+++....+..+..
T Consensus 192 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 271 (814)
T 3mkq_A 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE 271 (814)
T ss_dssp ECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCC
Confidence 0 113578999999999999999999999999999999999999999999999999998877766554432
Q ss_pred eeeeEEEEEecCCc--EEEEEeCCCeEEEEcCCCCeE----------E--------------------------------
Q psy14961 222 LFGATSVDFSVSGR--LLFAGYNDYTINVWDSLKCCR----------V-------------------------------- 257 (320)
Q Consensus 222 ~~~~~~~~~s~~~~--~l~~g~~dg~v~~wd~~~~~~----------~-------------------------------- 257 (320)
.+..++|+|++. ++++|+ ++.+.+|+.....+ +
T Consensus 272 --~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (814)
T 3mkq_A 272 --RSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQ 348 (814)
T ss_dssp --SEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCC
T ss_pred --cEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceee
Confidence 457899999987 466665 55677777543211 1
Q ss_pred -EEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 258 -NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 258 -~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
..+..|...+.+++|+|+|++|++++ |+.+++|+..
T Consensus 349 ~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 349 TKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp CEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred eecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECc
Confidence 11123455689999999999999988 8999999964
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3e-34 Score=245.76 Aligned_cols=209 Identities=23% Similarity=0.340 Sum_probs=173.2
Q ss_pred cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC--cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES--SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
.+.+|...|.++.|++++++|++|+.|++|++||+++ .+++..+.+|.++|.+++|.+..+++.|++|+.|+.|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 3568999999999999999999999999999999974 46778899999999999987544578999999999999999
Q ss_pred CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCee--E
Q psy14961 138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKE--V 213 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~--~ 213 (320)
++++.. .++..+.+|...|.+++|+|+ |.+|++++.|++|++||++.+.. .
T Consensus 84 ~~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 84 EENGRW-------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp BSSSCB-------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC
T ss_pred cCCCce-------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee
Confidence 876521 122345678899999999997 88999999999999999986532 1
Q ss_pred eEEecCcceeeeEEEEEecC-------------CcEEEEEeCCCeEEEEcCCCCe----EEEEeecCCCceeEEEECcCC
Q psy14961 214 ACYKKDSILFGATSVDFSVS-------------GRLLFAGYNDYTINVWDSLKCC----RVNHLMGHENRVSCLQVSPDG 276 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~s~~-------------~~~l~~g~~dg~v~~wd~~~~~----~~~~~~~h~~~i~~i~~s~~~ 276 (320)
..+..+. ..+.+++|+|+ +++|++|+.|++|++||..... ....+.+|.+.|.+++|+|++
T Consensus 139 ~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 139 IIIDAHA--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp EEEECCS--SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred eeeeccc--CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC
Confidence 2222222 24678899997 5799999999999999976543 556788999999999999984
Q ss_pred ---CeEEEecCCCceEeeecch
Q psy14961 277 ---TAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 277 ---~~l~s~s~D~~ir~~~~~~ 295 (320)
++|||||.|++|++|+...
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESS
T ss_pred CCceEEEEEECCCcEEEEEeCC
Confidence 8999999999999999754
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.1e-34 Score=254.40 Aligned_cols=268 Identities=20% Similarity=0.275 Sum_probs=213.2
Q ss_pred EEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCc---
Q psy14961 23 MACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESS--- 97 (320)
Q Consensus 23 ~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~--- 97 (320)
..++++|+...++ +++.||.|++|++............+.+|...|.++.|++ +++.|++|+.||+|++||+.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 3477888776444 5788999999998532221123445678999999999999 8899999999999999999887
Q ss_pred ----ceeeecccCccceeEEEEeeCCCC-CEEEEEeCCCeEEEEeCCCCcEEEEe--ccCCccc---------------c
Q psy14961 98 ----QLLQSFHGHTGELMDLDLAPSETG-NTFVSGSSDKLVNIWDMRTGYCVQSF--EGHHNLI---------------T 155 (320)
Q Consensus 98 ----~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~~~dg~i~lwd~~~~~~~~~~--~~~~~~~---------------~ 155 (320)
+++..+.+|...|.+++++| ++ +.|++++.|+.|++||+++++.+..+ ..|...+ +
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHP--TAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECS--SBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred cccCCceEEecCCCCeEEEEEECc--CCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 56778889999999998865 45 69999999999999999999988888 5554332 3
Q ss_pred CCCeEEEEECcCCeeeeee-cCCCCC-eEEEEEcCCCCEEEEe---eCCCeEEEEECCCCee-EeEEecCcceeeeEEEE
Q psy14961 156 DDKLVNIWDMRTGYCVQSF-EGHQSD-VNSVKFHPSGDAVATG---SDDATCRLFDLRADKE-VACYKKDSILFGATSVD 229 (320)
Q Consensus 156 ~d~~i~iwd~~~~~~~~~~-~~~~~~-v~~v~~~p~g~~l~s~---s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~ 229 (320)
.|+.|++||+++++++..+ .+|... +.+++|+|++.+|++| +.|+.|++||++..+. +...... ....+..++
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~ 274 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD-TSSGVLLPF 274 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC-CCSSCEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc-CCCceeEEE
Confidence 5889999999999999888 788775 8999999999999999 7999999999987654 2222211 112467889
Q ss_pred EecCCcEEEE-EeCCCeEEEEcCCCCeE-EEEeec--CCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 230 FSVSGRLLFA-GYNDYTINVWDSLKCCR-VNHLMG--HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 230 ~s~~~~~l~~-g~~dg~v~~wd~~~~~~-~~~~~~--h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
|+|++++|++ |+.||.|++||+.+..+ +..+.. |..+|.+++|+|++.++++ .|+.+|+|+...
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 9999999865 55799999999887653 334443 5689999999999998775 567999999754
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-34 Score=275.14 Aligned_cols=251 Identities=15% Similarity=0.182 Sum_probs=206.4
Q ss_pred EEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC--CCEEEEEeCCCeEEEE
Q psy14961 15 VTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS--DQQILTGSGDCTCALW 92 (320)
Q Consensus 15 ~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iw 92 (320)
+..|...|++++|+|++++|++|+.||.|++|++.. ........+.+|...|.++.|+++ ++.+++|+.||.|++|
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~--~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG--ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET--TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC--CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 457889999999999999999999999999999852 223445567789999999999877 8999999999999999
Q ss_pred ECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961 93 DVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC 170 (320)
Q Consensus 93 d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 170 (320)
|+.+++ .+..+..|...|.+++++|..+++.+++|+.||.|++||++.+... .
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~-------------------------~ 137 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-------------------------S 137 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-------------------------C
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-------------------------c
Confidence 998876 6677788999999998876533789999999999999999765211 1
Q ss_pred eeeecCCCCCeEEEEEcC-------------CCCEEEEeeCCCeEEEEECCCCee----EeEEecCcceeeeEEEEEecC
Q psy14961 171 VQSFEGHQSDVNSVKFHP-------------SGDAVATGSDDATCRLFDLRADKE----VACYKKDSILFGATSVDFSVS 233 (320)
Q Consensus 171 ~~~~~~~~~~v~~v~~~p-------------~g~~l~s~s~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~s~~ 233 (320)
...+.+|...|.+++|+| ++..+++|+.||.|++||++++.. ...+..+. ..+.+++|+|+
T Consensus 138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~--~~V~~l~~sp~ 215 (753)
T 3jro_A 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPT 215 (753)
T ss_dssp CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCC
T ss_pred eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC--CcEEEEEeccC
Confidence 223456888999999999 589999999999999999987632 22222222 24688999999
Q ss_pred ---CcEEEEEeCCCeEEEEcCCCCe-----EEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 234 ---GRLLFAGYNDYTINVWDSLKCC-----RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 234 ---~~~l~~g~~dg~v~~wd~~~~~-----~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
+.+|++|+.||.|++||..... ......+|...|++++|+|+|++|++|+.|+.|++|+..
T Consensus 216 ~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 216 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 8999999999999999987643 333345688999999999999999999999999999975
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3e-33 Score=251.80 Aligned_cols=258 Identities=22% Similarity=0.292 Sum_probs=208.3
Q ss_pred EEEeCccceEEEEEcCC-CCEEEEecCCCeEEEEEecccC------CcccccccccccccCeEEEEecCCCC-EEEEEeC
Q psy14961 14 SVTMPATWVMACAYAPS-GSVVASGGLDNKVTVYAIALED------DSSAKKKTVATHTSFISCCIFPNSDQ-QILTGSG 85 (320)
Q Consensus 14 ~~~~~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 85 (320)
....|...|++++|+|+ +.+|++++.||.|++|++.... ........+..|...+.++.|++++. .|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34457789999999997 6799999999999999986421 01233455678999999999999887 9999999
Q ss_pred CCeEEEEECCCcce-------eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCC
Q psy14961 86 DCTCALWDVESSQL-------LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDK 158 (320)
Q Consensus 86 dg~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~ 158 (320)
||.|++|++.++.. ...+..|...|.+++++|. ++..|++++.|+.|++||++++.
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~s~~~dg~i~i~d~~~~~---------------- 265 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-HESLFGSVADDQKLMIWDTRNNN---------------- 265 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS-CTTEEEEEETTSEEEEEETTCSC----------------
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC-CCCEEEEEeCCCeEEEEECCCCC----------------
Confidence 99999999987321 3456689999999998764 46799999999999999998642
Q ss_pred eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCC-CeeEeEEecCcceeeeEEEEEecCCc-
Q psy14961 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRA-DKEVACYKKDSILFGATSVDFSVSGR- 235 (320)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~- 235 (320)
...++..+..|...|++++|+|++. .+++|+.||.|++||++. ...+..+..+. ..+.++.|+|++.
T Consensus 266 --------~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~--~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 266 --------TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK--DEIFQVQWSPHNET 335 (430)
T ss_dssp --------SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS--SCEEEEEECSSCTT
T ss_pred --------CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC--CCEEEEEECCCCCC
Confidence 0123344557889999999999987 688999999999999987 34444444332 2467899999995
Q ss_pred EEEEEeCCCeEEEEcCCC--------------CeEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeecchHhh
Q psy14961 236 LLFAGYNDYTINVWDSLK--------------CCRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESKNRYV 298 (320)
Q Consensus 236 ~l~~g~~dg~v~~wd~~~--------------~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~~~~~ 298 (320)
+|++|+.|+.|++||+.. ...+..+.+|...|++++|+|+++ +|++++.|++|++|+..+...
T Consensus 336 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 336 ILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp EEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred EEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 799999999999999765 256677789999999999999999 899999999999999866544
No 83
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-33 Score=273.68 Aligned_cols=189 Identities=13% Similarity=0.119 Sum_probs=154.5
Q ss_pred EeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 16 TMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 16 ~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
..|...|++++|+|++++||+|+.||.|++|+.... .. .....|...|.++.|++ +++|++++.|++|++||+.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~----~~-~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV----EV-VIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC----EE-EEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc----EE-EEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 357889999999999999999999999999986421 11 12234778999999999 7899999999999999999
Q ss_pred CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE-----------EeccCCcc-----------
Q psy14961 96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ-----------SFEGHHNL----------- 153 (320)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~-----------~~~~~~~~----------- 153 (320)
+++++..+. |.+.|.+++++ +++++|++|+.||.|++||++++.... .+.+|...
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~s--p~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTD--ASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECC--TTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred CCcEEEEEc-CCCCEEEEEEC--CCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 998888776 66788887774 568999999999999999998876531 11122111
Q ss_pred -----ccCCCeEEEEECcCCeeeeeecCC------------------CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC
Q psy14961 154 -----ITDDKLVNIWDMRTGYCVQSFEGH------------------QSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD 210 (320)
Q Consensus 154 -----~~~d~~i~iwd~~~~~~~~~~~~~------------------~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~ 210 (320)
...|+.| +||++++++...+.+| ...|.+++|+|+|.+|++++.||+|++||++++
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 1368899 9999999988887765 467999999999999999999999999999887
Q ss_pred eeEe
Q psy14961 211 KEVA 214 (320)
Q Consensus 211 ~~~~ 214 (320)
+.+.
T Consensus 244 ~~~~ 247 (902)
T 2oaj_A 244 HMIM 247 (902)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 6653
No 84
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-32 Score=240.66 Aligned_cols=231 Identities=19% Similarity=0.326 Sum_probs=184.6
Q ss_pred cccccccccCeEEEEe-----cC-CCCEEEEEeCCCeEEEEECCCc-------ceeeecccCccceeEEEEeeCCCCCEE
Q psy14961 58 KKTVATHTSFISCCIF-----PN-SDQQILTGSGDCTCALWDVESS-------QLLQSFHGHTGELMDLDLAPSETGNTF 124 (320)
Q Consensus 58 ~~~~~~h~~~v~~~~~-----~~-~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l 124 (320)
...+.+|...|.++.| .+ ++++|++|+.|++|++||+.+. .+...+.+|...|.++++.+ ++.++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~--~~~~l 91 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ--ENCFA 91 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS--STTEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC--CCCEE
Confidence 3467899999999998 55 7889999999999999998643 45667889999999988854 68899
Q ss_pred EEEeCCCeEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeee--ecCCCCCeEEEEEc
Q psy14961 125 VSGSSDKLVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQS--FEGHQSDVNSVKFH 187 (320)
Q Consensus 125 ~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~v~~~ 187 (320)
++++.|+.|++||+++++.+..+.+|...+ +.|+.|++||+........ ..+|...|.+++|+
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence 999999999999999999888887765432 3588999999974332221 23788999999999
Q ss_pred CCC----------CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC-eE
Q psy14961 188 PSG----------DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC-CR 256 (320)
Q Consensus 188 p~g----------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~-~~ 256 (320)
|++ .+|++++.|+.|++||.. .+....+..+.. .+.+++|+|+|++|++|+.||.|++||+... ..
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~--~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHES--NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSS--CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccc--cceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 987 789999999999999954 444444443332 4678999999999999999999999998443 33
Q ss_pred EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
... ..+...|.+++|+|++++|+ ++.|+.|++|+...
T Consensus 249 ~~~-~~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 249 QRE-FDAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMT 285 (343)
T ss_dssp SEE-EECSSCEEEEEECSSSCEEE-EEESSCEEEEESSS
T ss_pred cee-ecCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCC
Confidence 333 34566799999999998776 55688999999643
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.6e-34 Score=249.20 Aligned_cols=246 Identities=18% Similarity=0.292 Sum_probs=197.9
Q ss_pred CeEeecccceeEEEEEe-----CccceEEEEEcCC----CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEE
Q psy14961 1 MIIWDGLTQTKEHSVTM-----PATWVMACAYAPS----GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCC 71 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~-----~~~~V~~~~~~~~----~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~ 71 (320)
|+|||..+++....+.. +...|.+++|+|+ +.+|++|+.||.|++||+.. ......+..|...|.++
T Consensus 46 v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~----~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 46 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT----MQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT----CCEEEEEESCCSCEEEE
T ss_pred EEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh----ceEeeeecCCCCcEEEE
Confidence 47999997776544432 4467999999999 67999999999999998752 23345567899999999
Q ss_pred EecC-CCCEEEEEeCCCeEEEEECCCcceeeec---ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961 72 IFPN-SDQQILTGSGDCTCALWDVESSQLLQSF---HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF 147 (320)
Q Consensus 72 ~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~ 147 (320)
.|++ ++..+++++.||.|++||+.+++.+..+ ..|...|.++++++ +++.|++++.||.|++||+++++....+
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL--LGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT--TSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC--CCCEEEEecCCCCEEEEECCCCcccccc
Confidence 9998 8899999999999999999998888777 68999999988855 6889999999999999999876432211
Q ss_pred c----------------------------cCCcc-------------ccCCCeEEEEECcCCee--------------ee
Q psy14961 148 E----------------------------GHHNL-------------ITDDKLVNIWDMRTGYC--------------VQ 172 (320)
Q Consensus 148 ~----------------------------~~~~~-------------~~~d~~i~iwd~~~~~~--------------~~ 172 (320)
. .|... .+.++.|++||++++.. +.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 279 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILG 279 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEE
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheec
Confidence 1 12211 23689999999987644 67
Q ss_pred eecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeE----eEEecCcceeeeEEEEEecCCcEEEEEeCCCeE
Q psy14961 173 SFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEV----ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTI 246 (320)
Q Consensus 173 ~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v 246 (320)
.+.+|...|.+++|+|+ +++|++++.||.|++||+.+++.. ..+..+.....+.+++|+|++++|++|+.||.|
T Consensus 280 ~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 359 (366)
T 3k26_A 280 RFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASI 359 (366)
T ss_dssp EEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEE
Confidence 78889999999999999 999999999999999999886532 233333222357889999999999999999999
Q ss_pred EEEcCC
Q psy14961 247 NVWDSL 252 (320)
Q Consensus 247 ~~wd~~ 252 (320)
++||+.
T Consensus 360 ~iwd~~ 365 (366)
T 3k26_A 360 WRWDRL 365 (366)
T ss_dssp EEEEC-
T ss_pred EEEEec
Confidence 999974
No 86
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.1e-32 Score=258.52 Aligned_cols=246 Identities=24% Similarity=0.418 Sum_probs=199.1
Q ss_pred CeEeecccce-----eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961 1 MIIWDGLTQT-----KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN 75 (320)
Q Consensus 1 ~~~W~~~~~~-----~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 75 (320)
|+|||+.+.. ....+..|...|.+++|+|++++|++|+.|+.|++||+.. ......+.+|...|.++.|++
T Consensus 407 i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~----~~~~~~~~~h~~~v~~~~~s~ 482 (694)
T 3dm0_A 407 IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA----GVSTRRFVGHTKDVLSVAFSL 482 (694)
T ss_dssp EEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEECT
T ss_pred EEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC----CcceeEEeCCCCCEEEEEEeC
Confidence 5799987532 3345677899999999999999999999999999999852 233456778999999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCcceee---ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc
Q psy14961 76 SDQQILTGSGDCTCALWDVESSQLLQ---SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN 152 (320)
Q Consensus 76 ~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~ 152 (320)
++..|++|+.|++|++||........ ...+|...|.+++++|......+++++.|+.|++||++++++...+.+|..
T Consensus 483 ~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~ 562 (694)
T 3dm0_A 483 DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG 562 (694)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 99999999999999999986543322 224688889999998765457899999999999999999988888877764
Q ss_pred cc---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe
Q psy14961 153 LI---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK 217 (320)
Q Consensus 153 ~~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~ 217 (320)
.+ +.|+.|++||+++++++..+.. ...|.+++|+|++.++++++ |+.|++||+++++.+..+.
T Consensus 563 ~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 563 YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLK 640 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEC
T ss_pred CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhc
Confidence 33 3589999999999998887764 46799999999998777765 5679999999887665443
Q ss_pred cCc-----------------ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961 218 KDS-----------------ILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252 (320)
Q Consensus 218 ~~~-----------------~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~ 252 (320)
.+. ....+.+++|+|+|++|++|+.||.|++||+.
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 641 VDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 211 01125789999999999999999999999975
No 87
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1e-33 Score=251.86 Aligned_cols=260 Identities=12% Similarity=0.091 Sum_probs=180.4
Q ss_pred EEcCCCCEEEEecCCCeEEEEEecccCCc-ccccccccccccCeEEEEecC--------CCCEEEEEeCCCeEEEEECCC
Q psy14961 26 AYAPSGSVVASGGLDNKVTVYAIALEDDS-SAKKKTVATHTSFISCCIFPN--------SDQQILTGSGDCTCALWDVES 96 (320)
Q Consensus 26 ~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~--------~~~~l~s~~~dg~v~iwd~~~ 96 (320)
.+++++.+|++|+.|++|++||....+.. ......+.+|...|.++.|++ ++++|++|+.|++|+|||+.+
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 34556778999999999999998643221 123446789999999999976 678999999999999999988
Q ss_pred cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961 97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG 176 (320)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 176 (320)
+..+..+..|...+.+++|+|. ++.+|++++.|+.|++||+++++.......+..... ...+ -++...........+
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~-~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~-~~~~-s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPS-NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN-PWLL-TLNTLPLVNTCHSSG 252 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETT-EEEEEEEEETTSEEEEEETTCCC----------CSC-CCSE-EEESGGGC------C
T ss_pred CceeeeecCCCCCcEEEEECCC-CCceEEecCCCCEEEEEECCCCcccccccccCCccc-ceEE-ecccccceeeeeccc
Confidence 8887778889999999998764 235899999999999999998876554432221110 1111 111111112223457
Q ss_pred CCCCeEEEEEc-CCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce----------------eeeEEEEEec--CCcEE
Q psy14961 177 HQSDVNSVKFH-PSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL----------------FGATSVDFSV--SGRLL 237 (320)
Q Consensus 177 ~~~~v~~v~~~-p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~----------------~~~~~~~~s~--~~~~l 237 (320)
|...+.+++|+ |+++.+++++.|+++++||+..++....+..+... .......++| ++.++
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 88899999997 79999999999999999999766543222111000 0011223443 45577
Q ss_pred EEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCce
Q psy14961 238 FAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTL 288 (320)
Q Consensus 238 ~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~i 288 (320)
++|+.||.|++||..++.....+.+|..+|.+++|||||++||+|+.||.+
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp EEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 888899999999999888888888999999999999999999999988753
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.8e-32 Score=242.02 Aligned_cols=251 Identities=18% Similarity=0.233 Sum_probs=205.6
Q ss_pred CeEeecccce------eEEEEEeCccceEEEEEcCC----C---CEEEEecCCCeEEEEEecccCCccc-cccccccc--
Q psy14961 1 MIIWDGLTQT------KEHSVTMPATWVMACAYAPS----G---SVVASGGLDNKVTVYAIALEDDSSA-KKKTVATH-- 64 (320)
Q Consensus 1 ~~~W~~~~~~------~~~~~~~~~~~V~~~~~~~~----~---~~l~s~~~dg~i~v~~~~~~~~~~~-~~~~~~~h-- 64 (320)
|+|||..+.+ ....+..|...|.+++|+|+ + ++|++++.|+.|++|++........ ....+..|
T Consensus 38 i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~ 117 (397)
T 1sq9_A 38 LKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS 117 (397)
T ss_dssp EEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCT
T ss_pred EEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeeccccc
Confidence 5799999877 56677788999999999999 9 9999999999999999864332110 13455667
Q ss_pred ---ccCeEEEEec----CCCCE-EEEEeCCCeEEEEECCC------cceee-----ec-------ccCccceeEEEEeeC
Q psy14961 65 ---TSFISCCIFP----NSDQQ-ILTGSGDCTCALWDVES------SQLLQ-----SF-------HGHTGELMDLDLAPS 118 (320)
Q Consensus 65 ---~~~v~~~~~~----~~~~~-l~s~~~dg~v~iwd~~~------~~~~~-----~~-------~~~~~~v~~~~~~~~ 118 (320)
...|.++.|+ ++++. +++++.||.|++||+.+ ++.+. .+ ..|...+.++++.+
T Consensus 118 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 196 (397)
T 1sq9_A 118 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE- 196 (397)
T ss_dssp TGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-
T ss_pred ccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-
Confidence 5899999999 99999 99999999999999988 66655 66 34788898888855
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCcEEEEecc---C---Cccc---------------cCC---CeEEEEECcCCeeeeee
Q psy14961 119 ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG---H---HNLI---------------TDD---KLVNIWDMRTGYCVQSF 174 (320)
Q Consensus 119 ~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~---~---~~~~---------------~~d---~~i~iwd~~~~~~~~~~ 174 (320)
++ .|++++.|+.|++||+++++.+..+.. | ...+ ..+ +.|++||+++++++..+
T Consensus 197 -~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 197 -RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp -TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred -Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 57 999999999999999999988888876 5 3322 246 89999999999999999
Q ss_pred cC-------------CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe------cCc-------------ce
Q psy14961 175 EG-------------HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK------KDS-------------IL 222 (320)
Q Consensus 175 ~~-------------~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~-------------~~ 222 (320)
.+ |...|.+++|+|++++|++++.||.|++||+++++.+..+. .+. ..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 354 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE 354 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccC
Confidence 88 99999999999999999999999999999999998887776 320 02
Q ss_pred eeeEEEEEecCC----------cEEEEEeCCCeEEEEcCCCC
Q psy14961 223 FGATSVDFSVSG----------RLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 223 ~~~~~~~~s~~~----------~~l~~g~~dg~v~~wd~~~~ 254 (320)
..+.+++|+|++ .+|++|+.||.|++||+.++
T Consensus 355 ~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 355 PGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred CceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 346889999998 79999999999999997654
No 89
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=242.76 Aligned_cols=244 Identities=13% Similarity=0.108 Sum_probs=194.0
Q ss_pred ceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCccccccccc--ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961 21 WVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISCCIFPNSDQQILTGSGDCTCALWDVESS 97 (320)
Q Consensus 21 ~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 97 (320)
.|.+++|+|++++| ++|+.||.|++|++.... ......+. .|...|.++.|++++++|++|+.||.|++|++.++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~ 181 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTS--KNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSI 181 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS--SSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC--CceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCc
Confidence 69999999999996 899999999999986211 11222333 56688999999999999999999999999999877
Q ss_pred ceee----ecccCccceeEEEEeeC-CCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeee
Q psy14961 98 QLLQ----SFHGHTGELMDLDLAPS-ETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQ 172 (320)
Q Consensus 98 ~~~~----~~~~~~~~v~~~~~~~~-~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 172 (320)
.... .+.+|...|.+++|+|. ..+.+|++++.|+.|++||++++.++..+
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------------------------- 236 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW------------------------- 236 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE-------------------------
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee-------------------------
Confidence 6543 77889999999999774 22679999999999999998776543221
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC-----------------------cceeeeEEEE
Q psy14961 173 SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD-----------------------SILFGATSVD 229 (320)
Q Consensus 173 ~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 229 (320)
+.+|...|.+++|+ ++++|++++.|+.|++||+++++.+..+... .....+..+.
T Consensus 237 -~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 237 -LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp -CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred -ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 34688899999999 9999999999999999999998877665421 1113467899
Q ss_pred EecCCcEEEEEe-CCCeEEEEcC--CCC---eEEEEeecCCCceeEEEECcCCCeEEEecC------CCceEeeecc
Q psy14961 230 FSVSGRLLFAGY-NDYTINVWDS--LKC---CRVNHLMGHENRVSCLQVSPDGTAFSSGSW------DTTLRDEESK 294 (320)
Q Consensus 230 ~s~~~~~l~~g~-~dg~v~~wd~--~~~---~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~------D~~ir~~~~~ 294 (320)
|+|++++|++++ .++.|++||+ ... ..+..+..| ..|.+++|+|++.+++.++. +..|++|...
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 999999999999 8999999998 444 667777788 88999999996544444443 5567888753
No 90
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=6e-32 Score=230.35 Aligned_cols=263 Identities=13% Similarity=0.071 Sum_probs=184.0
Q ss_pred CeEeecccc---eeEEEEEeCccceEEEEEcCCCCEEEEe--cCCCeEEEEEecccCC--cccccccccccccCeEEEEe
Q psy14961 1 MIIWDGLTQ---TKEHSVTMPATWVMACAYAPSGSVVASG--GLDNKVTVYAIALEDD--SSAKKKTVATHTSFISCCIF 73 (320)
Q Consensus 1 ~~~W~~~~~---~~~~~~~~~~~~V~~~~~~~~~~~l~s~--~~dg~i~v~~~~~~~~--~~~~~~~~~~h~~~v~~~~~ 73 (320)
+.+|+..+. ++.+....++.+|..++|.||..-|+.. +.-..-.++-+....+ .........+|...|..+
T Consensus 65 v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l-- 142 (356)
T 2w18_A 65 VSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL-- 142 (356)
T ss_dssp EEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE--
T ss_pred EEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec--
Confidence 468999988 7888888888899999999977644433 2222223333322111 111111123344444443
Q ss_pred cCCCCEEEEEe---CCCeEEEEEC-CCcceeeecccCccceeEEEEee-CCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961 74 PNSDQQILTGS---GDCTCALWDV-ESSQLLQSFHGHTGELMDLDLAP-SETGNTFVSGSSDKLVNIWDMRTGYCVQSFE 148 (320)
Q Consensus 74 ~~~~~~l~s~~---~dg~v~iwd~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~ 148 (320)
+++ .++.++ .|+.|++|++ .+++.+..+..|...+..++|++ .-++..|++++.|++|++||+++++++.++.
T Consensus 143 -~~g-~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 143 -TKR-RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp -TTT-EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred -CCC-cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence 344 444443 4999999999 55888888888999999999987 3457899999999999999999998887775
Q ss_pred cCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE------------EEeeCCCeEEEEECCCCeeEeEE
Q psy14961 149 GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV------------ATGSDDATCRLFDLRADKEVACY 216 (320)
Q Consensus 149 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l------------~s~s~dg~i~iwd~~~~~~~~~~ 216 (320)
++.. +...+.+++|+|+|.++ ++|+.|+++++||..+++.+..+
T Consensus 221 g~~~------------------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 221 IDDS------------------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp CCC---------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred CCCc------------------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 4321 22357788899988775 67889999999999998876543
Q ss_pred ec---CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCcee-EEEECcCCCeEEEecCCCceEeee
Q psy14961 217 KK---DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVS-CLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 217 ~~---~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~-~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.. ...... .+..+.++.++|+|+.|++|+|||+.+++.+.++.+|.+.+. .++|||||++|+|||.|++||+|+
T Consensus 277 ~~~~p~Gh~~~--~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 277 LYCLPPGQAGR--FLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EECCCTTCCCC--EEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EeeccCCCcce--eEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 21 111001 122333478999999999999999999999999999987654 699999999999999999999998
Q ss_pred c
Q psy14961 293 S 293 (320)
Q Consensus 293 ~ 293 (320)
.
T Consensus 355 ~ 355 (356)
T 2w18_A 355 Y 355 (356)
T ss_dssp E
T ss_pred C
Confidence 5
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-33 Score=251.18 Aligned_cols=257 Identities=14% Similarity=0.226 Sum_probs=201.4
Q ss_pred EEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCC---cc--
Q psy14961 26 AYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVES---SQ-- 98 (320)
Q Consensus 26 ~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~---~~-- 98 (320)
.|+|+++.+++++ .|+. .......+ .+|...|.++.|++ ++++|++|+.||+|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~------~w~~-----~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 102 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNL-----RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY 102 (437)
T ss_dssp GGCCCCCCCCCCC------GGGC-----CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC
T ss_pred hcCCccccccccc------cccc-----cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc
Confidence 3677888777765 2542 22334455 78899999999999 999999999999999999876 33
Q ss_pred -eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC---CCcEEEEeccC------------------------
Q psy14961 99 -LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR---TGYCVQSFEGH------------------------ 150 (320)
Q Consensus 99 -~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~---~~~~~~~~~~~------------------------ 150 (320)
....+ .|...|.++++.+ +++.|++++.||.|++||+. .++....+..+
T Consensus 103 ~~~~~~-~h~~~v~~~~~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 179 (437)
T 3gre_A 103 SSSLTY-DCSSTVTQITMIP--NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVN 179 (437)
T ss_dssp SCSEEE-ECSSCEEEEEECT--TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEEC
T ss_pred ceeeec-cCCCCEEEEEEeC--CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEc
Confidence 22222 4889999998864 67899999999999999994 44433322110
Q ss_pred --Cc---cccCCCeEEEEECcCCeeeeeecC--CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961 151 --HN---LITDDKLVNIWDMRTGYCVQSFEG--HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF 223 (320)
Q Consensus 151 --~~---~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 223 (320)
.. ..+.|+.|++||+++++++..+.+ |...|.+++|+|++++|++|+.||.|++||++.++.+..+..... .
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~ 258 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH-A 258 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC-E
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC-C
Confidence 11 124689999999999999999988 889999999999999999999999999999999887766542211 2
Q ss_pred eeEEEE----EecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec--------------------------CCCceeEEEEC
Q psy14961 224 GATSVD----FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG--------------------------HENRVSCLQVS 273 (320)
Q Consensus 224 ~~~~~~----~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~--------------------------h~~~i~~i~~s 273 (320)
.+.++. |+|++.+|++|+.||.|++||+.++..+..+.+ |...|++++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 456774 456788999999999999999998887776664 45568889999
Q ss_pred cCCCeEEEecCCCceEeeecchHhh
Q psy14961 274 PDGTAFSSGSWDTTLRDEESKNRYV 298 (320)
Q Consensus 274 ~~~~~l~s~s~D~~ir~~~~~~~~~ 298 (320)
++++|++|+.|++|++|+..+.-.
T Consensus 339 -~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 339 -NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp -TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred -CceEEEecCCCCeEEEEECCCccc
Confidence 779999999999999999765533
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-31 Score=227.18 Aligned_cols=245 Identities=22% Similarity=0.405 Sum_probs=202.9
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|++||..+++.......|...|.+++|+|++++|++++.|+.+++|++.... .......+..|...|.++.| +++.+
T Consensus 41 v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~--~~~~l 117 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS-GEDPLYTLIGHQGNVCSLSF--QDGVV 117 (313)
T ss_dssp EEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT-TSCC-CEECCCSSCEEEEEE--ETTEE
T ss_pred EEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC-CCCcccchhhcccCEEEEEe--cCCEE
Confidence 5799999888887788889999999999999999999999999999985422 22334556789999999999 56799
Q ss_pred EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEecc-CCc-------
Q psy14961 81 LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG-HHN------- 152 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~-~~~------- 152 (320)
++++.||.|++|| .+..+..+..|...+.++.+.+. +++.+++++.|+.|++||. +.....+.. +..
T Consensus 118 ~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~ 192 (313)
T 3odt_A 118 ISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF-SENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAV 192 (313)
T ss_dssp EEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET-TTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEE
T ss_pred EEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC-CCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEE
Confidence 9999999999999 56777788889999999988763 4689999999999999994 333444333 221
Q ss_pred -----c--ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961 153 -----L--ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGA 225 (320)
Q Consensus 153 -----~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 225 (320)
+ ...++.|++||+++++++..+.+|...|.+++|+|++ .+++++.||.|++||+++++....+..+.. .+
T Consensus 193 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--~i 269 (313)
T 3odt_A 193 VDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI--SI 269 (313)
T ss_dssp EETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS--CE
T ss_pred cCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc--eE
Confidence 1 2468999999999999999999999999999999999 589999999999999999887776655432 46
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEcCCCCeEE
Q psy14961 226 TSVDFSVSGRLLFAGYNDYTINVWDSLKCCRV 257 (320)
Q Consensus 226 ~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~ 257 (320)
.+++|+|+++ +++++.||.|++||+.+....
T Consensus 270 ~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 270 WSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred EEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 7899999998 567899999999998776544
No 93
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-33 Score=241.86 Aligned_cols=211 Identities=23% Similarity=0.309 Sum_probs=167.7
Q ss_pred cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
.+.+|...|.++.|++++++|++|+.|++|++||+.++. ++..+.+|.+.|.+++|.+..+++.|++|+.|+.|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 356899999999999999999999999999999998764 467788999999999986544578999999999999999
Q ss_pred CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961 138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEVAC 215 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~~~ 215 (320)
++++.. .+...+.+|...|.+++|+|+ +.+|++|+.|++|++||++.+.....
T Consensus 88 ~~~~~~-------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 88 EENGTW-------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp CSSSCC-------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred CCCCcc-------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 876521 123345678999999999998 78999999999999999986532211
Q ss_pred -EecCcceeeeEEEEEecC-----------------CcEEEEEeCCCeEEEEcCCCC---eEEEEeecCCCceeEEEECc
Q psy14961 216 -YKKDSILFGATSVDFSVS-----------------GRLLFAGYNDYTINVWDSLKC---CRVNHLMGHENRVSCLQVSP 274 (320)
Q Consensus 216 -~~~~~~~~~~~~~~~s~~-----------------~~~l~~g~~dg~v~~wd~~~~---~~~~~~~~h~~~i~~i~~s~ 274 (320)
.........+.+++|+|+ +.+|++|+.|++|++||.... ..+..+.+|.++|.+++|+|
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp 222 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP 222 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC
Confidence 111111123567788887 478999999999999998643 46677889999999999999
Q ss_pred CC----CeEEEecCCCceEeeecch
Q psy14961 275 DG----TAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 275 ~~----~~l~s~s~D~~ir~~~~~~ 295 (320)
++ ++|||||.|++|++|+...
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCCCCceEEEEcCCCeEEEEEccC
Confidence 86 8899999999999999754
No 94
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.4e-31 Score=227.12 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=192.7
Q ss_pred EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC-CCEEEEEeCCCeEEEEECCCcc-----eeeecccCccc
Q psy14961 36 SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS-DQQILTGSGDCTCALWDVESSQ-----LLQSFHGHTGE 109 (320)
Q Consensus 36 s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~ 109 (320)
+|-..|+..+|-.....+......++.+|.+.|+++.|+|+ +++|++|+.|++|++||+.+.+ +...+.+|...
T Consensus 9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~ 88 (340)
T 4aow_A 9 SGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF 88 (340)
T ss_dssp -----------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSC
T ss_pred cccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCC
Confidence 33334544444322222333445578899999999999987 5789999999999999986543 45678899999
Q ss_pred eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCc-------------c--ccCCCeEEEEECcCCe-eeee
Q psy14961 110 LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHN-------------L--ITDDKLVNIWDMRTGY-CVQS 173 (320)
Q Consensus 110 v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~-------------~--~~~d~~i~iwd~~~~~-~~~~ 173 (320)
|.+++|. +++++|++++.|+.|++|+............+.. + ...|+.+++||..... ....
T Consensus 89 V~~~~~s--~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 89 VSDVVIS--SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp EEEEEEC--TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EEEEEEC--CCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE
Confidence 9998885 5689999999999999999988765544332221 1 2468999999987654 3445
Q ss_pred ecCCCCCeEEEEEcCCC--CEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961 174 FEGHQSDVNSVKFHPSG--DAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS 251 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g--~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~ 251 (320)
..+|...+..++|++++ ..+++++.|+.|++||+++++.+..+..+.. .+.+++|+|++++|++|+.||.|++||.
T Consensus 167 ~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 167 DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp SSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred eccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence 67899999999999875 5788999999999999999887766654432 4678999999999999999999999999
Q ss_pred CCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 252 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 252 ~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
.+...+..+.. ...|.+++|+|++. +++++.|++|++|+.+..
T Consensus 245 ~~~~~~~~~~~-~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 245 NEGKHLYTLDG-GDIINALCFSPNRY-WLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp TTTEEEEEEEC-SSCEEEEEECSSSS-EEEEEETTEEEEEETTTT
T ss_pred ccCceeeeecC-CceEEeeecCCCCc-eeeccCCCEEEEEECCCC
Confidence 99888877665 46899999999875 556778999999997543
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.1e-33 Score=246.75 Aligned_cols=226 Identities=14% Similarity=0.143 Sum_probs=178.5
Q ss_pred ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc--ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961 63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESS--QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT 140 (320)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~ 140 (320)
.+...|.++.|++++++|++|+.|+.|++||+.++ +.+..+.+|...|.+++++| ++++|++++.|+.|++||+.+
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP--KSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT--TTCCEEEEETTSSEEEC----
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC--CCCEEEEEeCCCeEEEEEcCC
Confidence 35678999999999999999999999999999987 77888899999999998855 578999999999999999988
Q ss_pred Cc---EEEEeccCCcc---------------ccCCCeEEEEECcCCe---eeeeecC-CCCCeEEEEEcCCCCEEEEeeC
Q psy14961 141 GY---CVQSFEGHHNL---------------ITDDKLVNIWDMRTGY---CVQSFEG-HQSDVNSVKFHPSGDAVATGSD 198 (320)
Q Consensus 141 ~~---~~~~~~~~~~~---------------~~~d~~i~iwd~~~~~---~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~ 198 (320)
+. ....+.+|... .+.|+.|++||++++. ....+.+ |...|.+++|+|++++|++++.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 76 44444333322 1358899999999876 4677777 9999999999999999999999
Q ss_pred CCeEEEEECCCC------------------eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE----
Q psy14961 199 DATCRLFDLRAD------------------KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR---- 256 (320)
Q Consensus 199 dg~i~iwd~~~~------------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~---- 256 (320)
|+.|++||+... +.+..+ .....+.+++|+|++++|++|+.||.|++||+.+...
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc---cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 999999998532 222222 1122467899999999999999999999999887765
Q ss_pred EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
+..+.+|..+|.+++|+|++++|++|+.|+.+..|..
T Consensus 244 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 244 LITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp CCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred eEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 7788999999999999999999999988887754444
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4e-31 Score=232.30 Aligned_cols=229 Identities=17% Similarity=0.208 Sum_probs=192.1
Q ss_pred cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC
Q psy14961 62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR 139 (320)
Q Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~ 139 (320)
..|...|.++.|+++++++++++.|+.|++||+.+++ .+..+.+|...|.++++.+ ++++|++++.|+.|++||+.
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP--DSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEEEE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC--CCCEEEEEcCCCeEEEEECC
Confidence 3588899999999999999999999999999999887 7888889999999998876 58899999999999999998
Q ss_pred CCcEEEEe--ccCCcc---------------ccCCCeEEEEECcCCee----eeeecCCCCCeEEEEEcCCCCEEEEeeC
Q psy14961 140 TGYCVQSF--EGHHNL---------------ITDDKLVNIWDMRTGYC----VQSFEGHQSDVNSVKFHPSGDAVATGSD 198 (320)
Q Consensus 140 ~~~~~~~~--~~~~~~---------------~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~v~~~p~g~~l~s~s~ 198 (320)
+++....+ ..+... ...++.+++||++.+.. .....+|...|.+++|+|++++|++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 87643332 222211 13578999999988652 2333678999999999999999999999
Q ss_pred CCeEEEEECC------------------CCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961 199 DATCRLFDLR------------------ADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL 260 (320)
Q Consensus 199 dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~ 260 (320)
|+.|++||++ .++.+..+..+. ..+.+++|+|++.+|++|+.|+.|++||+.+...+..+
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC--GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS--SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCC--CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 9999999964 444444443322 24678999999999999999999999999988899999
Q ss_pred ecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 261 MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 261 ~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
..|..+|.+++|+|++++|++| .|+.|++|+...
T Consensus 241 ~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 241 ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999999999999988887 999999999766
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.8e-32 Score=242.83 Aligned_cols=233 Identities=19% Similarity=0.333 Sum_probs=185.0
Q ss_pred ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-----------eeeecccCc------------cceeEEEEeeCC
Q psy14961 63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----------LLQSFHGHT------------GELMDLDLAPSE 119 (320)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 119 (320)
.+...|.++.|++++++|++|+.||.|++||+.+++ +...+.+|. +.|.+++|.+..
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999998776 467788898 889999997753
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCcEE---------------------------------------EE-eccCCcc------
Q psy14961 120 TGNTFVSGSSDKLVNIWDMRTGYCV---------------------------------------QS-FEGHHNL------ 153 (320)
Q Consensus 120 ~~~~l~s~~~dg~i~lwd~~~~~~~---------------------------------------~~-~~~~~~~------ 153 (320)
+...|++++.|+.|++||+..+... .. ..+|...
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 3379999999999999998653321 11 1233221
Q ss_pred --------ccCCCeEEEEECcC-Ceeee-------eecCCCCCeEEEEEcCCC-CEEEEeeCCCeEEEEECCCCee----
Q psy14961 154 --------ITDDKLVNIWDMRT-GYCVQ-------SFEGHQSDVNSVKFHPSG-DAVATGSDDATCRLFDLRADKE---- 212 (320)
Q Consensus 154 --------~~~d~~i~iwd~~~-~~~~~-------~~~~~~~~v~~v~~~p~g-~~l~s~s~dg~i~iwd~~~~~~---- 212 (320)
.+.|+.|++||+++ +.+.. .+.+|...|.+++|+|++ ++|++|+.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 186 NSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp CTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred cCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 13689999999984 44443 366899999999999998 9999999999999999998765
Q ss_pred EeEEecCcce----------eeeEEEEEecCCcEEEEEeCCCeEEEEcCCC-CeEEEEeecCCCc---------------
Q psy14961 213 VACYKKDSIL----------FGATSVDFSVSGRLLFAGYNDYTINVWDSLK-CCRVNHLMGHENR--------------- 266 (320)
Q Consensus 213 ~~~~~~~~~~----------~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~--------------- 266 (320)
...+..+... ..+.+++|+|+|++|++|+. +.|++||+.. ..++..+.+|...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 3444433210 14688999999999999999 9999999986 7778888888642
Q ss_pred eeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 267 VSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 267 i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
+..++|+|++++|++|+.|++|++|+....
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 234999999999999999999999997554
No 98
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.1e-31 Score=233.38 Aligned_cols=235 Identities=20% Similarity=0.305 Sum_probs=193.2
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc-cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961 22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL 100 (320)
Q Consensus 22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (320)
+.++.|++ ..+++++.|+.|++|++.... ....+ ..|...|.++.|++++.+|++|+.||.|++||+.+++.+
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~----~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 169 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGS----VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKL 169 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCC----EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCc----EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEE
Confidence 44566665 457888899999999985322 11222 237889999999999999999999999999999999999
Q ss_pred eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCC
Q psy14961 101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180 (320)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 180 (320)
..+..|...|.++++ +++.|++++.||.|++||++... .....+.+|...
T Consensus 170 ~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~--------------------------~~~~~~~~~~~~ 219 (401)
T 4aez_A 170 RTMAGHQARVGCLSW----NRHVLSSGSRSGAIHHHDVRIAN--------------------------HQIGTLQGHSSE 219 (401)
T ss_dssp EEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSSS--------------------------CEEEEEECCSSC
T ss_pred EEecCCCCceEEEEE----CCCEEEEEcCCCCEEEEecccCc--------------------------ceeeEEcCCCCC
Confidence 999999999999887 35799999999999999987432 123445678899
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe--CCCeEEEEcCCCCeEE
Q psy14961 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY--NDYTINVWDSLKCCRV 257 (320)
Q Consensus 181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~--~dg~v~~wd~~~~~~~ 257 (320)
|.+++|+|++.+|++++.|+.|++||+++++....+..+.. .+.+++|+|++. ++++|+ .|+.|++||+.++..+
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA--AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS--CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc--eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 99999999999999999999999999998877665544332 457899999765 666655 7999999999988888
Q ss_pred EEeecCCCceeEEEECcCCCeEEE--ecCCCceEeeecch
Q psy14961 258 NHLMGHENRVSCLQVSPDGTAFSS--GSWDTTLRDEESKN 295 (320)
Q Consensus 258 ~~~~~h~~~i~~i~~s~~~~~l~s--~s~D~~ir~~~~~~ 295 (320)
..+. |...|.+++|+|++++|++ |+.|+.|++|+...
T Consensus 298 ~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 298 NTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 7765 6678999999999999999 55899999999755
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=234.14 Aligned_cols=255 Identities=15% Similarity=0.100 Sum_probs=191.1
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccC-----Cccccc-ccccccccCeEEEEec
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALED-----DSSAKK-KTVATHTSFISCCIFP 74 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~-----~~~~~~-~~~~~h~~~v~~~~~~ 74 (320)
|++||..+++....+. ...|.++.|+|+ +++++.|+.+++|+..... ...... .....|...|.++.|+
T Consensus 60 v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 134 (343)
T 3lrv_A 60 LHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGH 134 (343)
T ss_dssp EEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECC
T ss_pred EEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcC
Confidence 5799999888776655 466788889988 9999999999999865210 011111 1122566889999999
Q ss_pred C--CCCEEEEEeCCCeEEEEECCCcceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961 75 N--SDQQILTGSGDCTCALWDVESSQLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH 151 (320)
Q Consensus 75 ~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~ 151 (320)
+ +++++++++.||+|++||+++++.+.... .+...+.+++++| ++.+|++|+.||.|++||++++..+
T Consensus 135 ~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p--dg~~lasg~~dg~i~iwd~~~~~~~------- 205 (343)
T 3lrv_A 135 NEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK--DSLLLALYSPDGILDVYNLSSPDQA------- 205 (343)
T ss_dssp C---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT--TSCEEEEECTTSCEEEEESSCTTSC-------
T ss_pred CCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC--CCCEEEEEcCCCEEEEEECCCCCCC-------
Confidence 9 99999999999999999999988866553 3455788888754 6899999999999999998876432
Q ss_pred ccccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec---CcceeeeEE
Q psy14961 152 NLITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK---DSILFGATS 227 (320)
Q Consensus 152 ~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~ 227 (320)
...+.+ |..+|.+++|+|+|.+|++++ |+.|++||++..+....+.. +.......+
T Consensus 206 -------------------~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 206 -------------------SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp -------------------CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred -------------------ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceE
Confidence 023344 888999999999999999999 55999999998765433221 111111146
Q ss_pred EEEecCCcEEEEEeC-CCeEEEEcCCCCeEEEEeecCCCceeEEEECc---CCCeEEEecCCCceEeeec
Q psy14961 228 VDFSVSGRLLFAGYN-DYTINVWDSLKCCRVNHLMGHENRVSCLQVSP---DGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 228 ~~~s~~~~~l~~g~~-dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~---~~~~l~s~s~D~~ir~~~~ 293 (320)
++|+|+|++|++|+. ++.+++|+.......-.. .++..++|+| +.+.|++++.|+.++++-.
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 999999999999998 999999987554332222 5678899999 8899999999999998753
No 100
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-31 Score=237.92 Aligned_cols=238 Identities=9% Similarity=0.092 Sum_probs=183.5
Q ss_pred ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCc-------------------------cccccccc-ccccCeEEEE
Q psy14961 19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDS-------------------------SAKKKTVA-THTSFISCCI 72 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-------------------------~~~~~~~~-~h~~~v~~~~ 72 (320)
..+|.+++|+|||+++|+++.|++|+ |......- ......+. .|...|.++.
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence 47999999999999999999999996 43211100 00001111 4578899999
Q ss_pred ecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcc-----ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE----
Q psy14961 73 FPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTG-----ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC---- 143 (320)
Q Consensus 73 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~---- 143 (320)
|+|+|+.|++++.||+|++||.++ ++..+. |.. .+.+++| +|+|++|++|+.||.|++||+..+..
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svaf--SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEW--NPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEE--CSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEE--cCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 999999999999999999999654 555566 554 4887777 55799999999999999999987531
Q ss_pred ---EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE---eEEe
Q psy14961 144 ---VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV---ACYK 217 (320)
Q Consensus 144 ---~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~---~~~~ 217 (320)
+.++..+ ..+|...|.+++|+|+| +++++.|+++++||+..++.. ..+.
T Consensus 168 ~i~l~ti~~~-----------------------~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 168 FYFESSIRLS-----------------------DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp CEEEEEEECS-----------------------CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE
T ss_pred ceeeeeeecc-----------------------cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec
Confidence 1111111 25688899999999999 888999999999999876632 2222
Q ss_pred -cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEE--CcCCCeEEEecCCCceEeeecc
Q psy14961 218 -KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQV--SPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 218 -~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~--s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.+. ..+.+++|+ |+.||+++ +++|++||...........+|.+.|+.++| +||++.|++|+.||+ |+|...
T Consensus 223 ~~h~--~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 223 NASR--RKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCCS--SCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred cccc--CcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 221 246788999 68999887 699999998887764444489999999999 999999999999999 999863
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=231.96 Aligned_cols=250 Identities=16% Similarity=0.199 Sum_probs=192.8
Q ss_pred CeEeecccceeEEEE-EeCccceEEEEEcCC---CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEe---
Q psy14961 1 MIIWDGLTQTKEHSV-TMPATWVMACAYAPS---GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF--- 73 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~-~~~~~~V~~~~~~~~---~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~--- 73 (320)
|+|||..+++..... ..|...|.+++|+|+ +++|++|+.||.|++|++.... .....+..|...|.++.|
T Consensus 46 v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~ 122 (357)
T 3i2n_A 46 IQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE---MPVYSVKGHKEIINAIDGIGG 122 (357)
T ss_dssp EEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS---SCSEEECCCSSCEEEEEEESG
T ss_pred EEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC---ccEEEEEecccceEEEeeccc
Confidence 479999987765433 357789999999998 6999999999999999985332 134567789999999954
Q ss_pred ---cCCCCEEEEEeCCCeEEEEECCCcc-eeeecccCcc----ceeEEEEe--eCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961 74 ---PNSDQQILTGSGDCTCALWDVESSQ-LLQSFHGHTG----ELMDLDLA--PSETGNTFVSGSSDKLVNIWDMRTGYC 143 (320)
Q Consensus 74 ---~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~----~v~~~~~~--~~~~~~~l~s~~~dg~i~lwd~~~~~~ 143 (320)
+++++.|++++.||.|++||+.++. ++..+..|.+ .+.++.+. .+++++.+++++.|+.|++||+++++.
T Consensus 123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE
T ss_pred cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce
Confidence 6788999999999999999998876 6666665554 67777653 356789999999999999999998875
Q ss_pred EEEe-----------cc---CCcc---ccCCCeEEEEECcCCeeeeeec-----CCCCCeEEEEEcCCCC-EEEEeeCCC
Q psy14961 144 VQSF-----------EG---HHNL---ITDDKLVNIWDMRTGYCVQSFE-----GHQSDVNSVKFHPSGD-AVATGSDDA 200 (320)
Q Consensus 144 ~~~~-----------~~---~~~~---~~~d~~i~iwd~~~~~~~~~~~-----~~~~~v~~v~~~p~g~-~l~s~s~dg 200 (320)
.... .+ .... ...++.|++||++++++...+. +|...|.+++|+|++. +|++++.||
T Consensus 203 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 203 RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC
Confidence 4322 21 1111 2468899999998877665554 8999999999999998 799999999
Q ss_pred eEEEEECCCCe-------------------eEeEEecCcceeeeEEEEEecCCcEEE-EEeCCCeEEEEcCCCCe
Q psy14961 201 TCRLFDLRADK-------------------EVACYKKDSILFGATSVDFSVSGRLLF-AGYNDYTINVWDSLKCC 255 (320)
Q Consensus 201 ~i~iwd~~~~~-------------------~~~~~~~~~~~~~~~~~~~s~~~~~l~-~g~~dg~v~~wd~~~~~ 255 (320)
.|++||++.+. .+..+..+. ..+.+++|+|++++|+ +|+.||.|++||+.+..
T Consensus 283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST--QPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS--SCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cEEEeecCCCcccccccCCCCccccccccceeeccccCC--CCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 99999987543 222222222 2467899999999998 79999999999987643
No 102
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.2e-31 Score=233.75 Aligned_cols=245 Identities=14% Similarity=0.204 Sum_probs=188.9
Q ss_pred CeEeecccceeEEEEE--eCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961 1 MIIWDGLTQTKEHSVT--MPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD 77 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~--~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 77 (320)
|+|||..+.+...... .|...|.+++|+| ++++|++++.|+.|++||+.. ...........|...|.++.|++++
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~ 175 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSR 175 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS--CEEEEEECCCCSSCCEEEEEEETTT
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC--CceEEEeccCCCCCCeEEEEECCCC
Confidence 5799999877765554 4888999999999 789999999999999999852 2222222223455889999999999
Q ss_pred CEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCC----CcEEEEec----
Q psy14961 78 QQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRT----GYCVQSFE---- 148 (320)
Q Consensus 78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~----~~~~~~~~---- 148 (320)
+.+++|+.|+.|++||+ +++.+..+..|...|.++++.| ++. .|++++.|+.|++||+++ +.++..+.
T Consensus 176 ~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (383)
T 3ei3_B 176 QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP--RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP 252 (383)
T ss_dssp TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS--SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC
T ss_pred CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC--CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc
Confidence 99999999999999999 5777888889999999998865 466 999999999999999987 55544331
Q ss_pred -------c-CCcc---ccCCCeEEEEECcCCeeeeeecCCC-----------------CCeEEEEEcCCCCEEEEeeCCC
Q psy14961 149 -------G-HHNL---ITDDKLVNIWDMRTGYCVQSFEGHQ-----------------SDVNSVKFHPSGDAVATGSDDA 200 (320)
Q Consensus 149 -------~-~~~~---~~~d~~i~iwd~~~~~~~~~~~~~~-----------------~~v~~v~~~p~g~~l~s~s~dg 200 (320)
. .... .+.|+.|++||++++.+...+.+|. ..+..++|+|++++ +++.|+
T Consensus 253 v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~ 330 (383)
T 3ei3_B 253 VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKR 330 (383)
T ss_dssp EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCC
T ss_pred eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCC
Confidence 1 1111 2357899999999887766665443 23444666666665 778999
Q ss_pred eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961 201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK 253 (320)
Q Consensus 201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~ 253 (320)
.|++||+.+++.+..+..+.....+..++|+|++.+|++|+ |+.|++||+.+
T Consensus 331 ~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 331 TIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred eEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 99999999988877765432222345679999999999997 99999999753
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.3e-31 Score=238.72 Aligned_cols=255 Identities=23% Similarity=0.391 Sum_probs=195.3
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQI 80 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (320)
|++||..+++....+..|...|.+++| ++++|++|+.||.|++||+... .....+..|...|.++.|. ++.+
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~~--~~~l 226 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG----EMLNTLIHHCEAVLHLRFN--NGMM 226 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC----CEEEEECCCCSCEEEEECC--TTEE
T ss_pred EEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC----cEEEEEcCCCCcEEEEEEc--CCEE
Confidence 579999999988888889999999988 7889999999999999998532 3345677899999999996 4599
Q ss_pred EEEeCCCeEEEEECCCccee---eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc---
Q psy14961 81 LTGSGDCTCALWDVESSQLL---QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI--- 154 (320)
Q Consensus 81 ~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~--- 154 (320)
++|+.||.|++||+.++... ..+.+|...|.++++ +++.+++|+.||.|++||+++++.+..+.+|...+
T Consensus 227 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 302 (435)
T 1p22_A 227 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF----DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL 302 (435)
T ss_dssp EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe----CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEE
Confidence 99999999999999887654 567789999988877 46899999999999999999999888887765432
Q ss_pred ----------cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe---------eEeE
Q psy14961 155 ----------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK---------EVAC 215 (320)
Q Consensus 155 ----------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~---------~~~~ 215 (320)
+.|+.|++||+++++++..+.+|...|.+++| ++.+|++|+.||.|++||+..++ .+..
T Consensus 303 ~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 380 (435)
T 1p22_A 303 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT 380 (435)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEE
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheee
Confidence 36899999999999999999999999999999 67899999999999999986543 3333
Q ss_pred EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961 216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP 274 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~ 274 (320)
+..+.. .+.+++| ++.+|++|+.||.|++||+.+....... ....+..++.|.+
T Consensus 381 ~~~h~~--~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 434 (435)
T 1p22_A 381 LVEHSG--RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAE-PPRSPSRTYTYIS 434 (435)
T ss_dssp ECCCSS--CCCCEEE--CSSCEEECCSSSEEEEEC------------------------
T ss_pred ccCCCC--CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccC-CCCCCccceeeec
Confidence 333322 3456666 7889999999999999998765444322 2334455555544
No 104
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-30 Score=220.08 Aligned_cols=243 Identities=21% Similarity=0.402 Sum_probs=192.6
Q ss_pred CeEeecccceeEEEEE--eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961 1 MIIWDGLTQTKEHSVT--MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ 78 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~--~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 78 (320)
|+|||..+++....+. .|...|++++|+|++++|++|+.||.|++|++.. ......+.+|...+.+..+ ++.
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~----~~~~~~~~~h~~~~~~~~~--~~~ 120 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ----QKRLRNMTSHSARVGSLSW--NSY 120 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT----TEEEEEEECCSSCEEEEEE--ETT
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC----ceeEEEecCccceEEEeec--CCC
Confidence 5799999988776554 4667899999999999999999999999999853 2344567788888777655 457
Q ss_pred EEEEEeCCCeEEEEECCCc-ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE----EEeccC---
Q psy14961 79 QILTGSGDCTCALWDVESS-QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV----QSFEGH--- 150 (320)
Q Consensus 79 ~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~----~~~~~~--- 150 (320)
.+++++.++.+++|+.... ..+..+.+|...+..+.+. ++++.|++++.|+.|++||+++++.. .....+
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 198 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWA--PDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 198 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEc--CCCCEEEEEecCcceeEEECCCCcccccceeeecccCCc
Confidence 8999999999999998765 4556778888888877764 46889999999999999999875421 111111
Q ss_pred ----------Ccc-----ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee--CCCeEEEEECCCCeeE
Q psy14961 151 ----------HNL-----ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS--DDATCRLFDLRADKEV 213 (320)
Q Consensus 151 ----------~~~-----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s--~dg~i~iwd~~~~~~~ 213 (320)
... ...++.|++||.+........ .+...+..+.|+|+++.+++++ .|+.|++||+++++.+
T Consensus 199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV 277 (318)
T ss_dssp EEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred eEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE
Confidence 111 135788999999887766554 4667899999999999887654 7999999999999888
Q ss_pred eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 214 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
..+..+.. .+.+++|+|+|++|++|+.||+|++||+.+.
T Consensus 278 ~~l~gH~~--~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 278 AELKGHTS--RVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEECCCSS--CEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEcCCCC--CEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 77765443 4688999999999999999999999998654
No 105
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-30 Score=224.41 Aligned_cols=232 Identities=16% Similarity=0.267 Sum_probs=195.8
Q ss_pred ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961 59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138 (320)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~ 138 (320)
..+.+|...|.++.|++++++|++++.||.|++||+.+++.+..+..|...|.++++.+ ++++|++++.||.|++||+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC--FTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEET
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC--CCCEEEEEeCCCeEEEEEC
Confidence 45778999999999999999999999999999999999999999999999999998854 6889999999999999999
Q ss_pred CCCcEEEEeccCCcc--------------ccCC-----CeEEEEECcCCe-----------eeeeecCCCC--CeEEEEE
Q psy14961 139 RTGYCVQSFEGHHNL--------------ITDD-----KLVNIWDMRTGY-----------CVQSFEGHQS--DVNSVKF 186 (320)
Q Consensus 139 ~~~~~~~~~~~~~~~--------------~~~d-----~~i~iwd~~~~~-----------~~~~~~~~~~--~v~~v~~ 186 (320)
.+++.+..+...... ...+ +.+++||++... ....+..|.. .+.+++|
T Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999887766522111 1234 899999987653 3344555665 8999999
Q ss_pred cCCCCEEEEeeCCCeEEEEECCC-CeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC
Q psy14961 187 HPSGDAVATGSDDATCRLFDLRA-DKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN 265 (320)
Q Consensus 187 ~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~ 265 (320)
+|++++|++++.||.|++||+++ .+.+..+..+.. .+.+++|+|++.+|++++.|+.|++||+.+...+..+. +..
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~ 260 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK--SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDC 260 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC--ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCC
Confidence 99999999999999999999998 566555554332 46789999999999999999999999999888877666 788
Q ss_pred ceeEEEECcCCCeEEEecCCC--------------ceEeeecch
Q psy14961 266 RVSCLQVSPDGTAFSSGSWDT--------------TLRDEESKN 295 (320)
Q Consensus 266 ~i~~i~~s~~~~~l~s~s~D~--------------~ir~~~~~~ 295 (320)
.+.+++|+|+++++++++.++ .+++|+...
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 999999999999999999998 788888643
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.9e-30 Score=228.67 Aligned_cols=276 Identities=11% Similarity=0.098 Sum_probs=215.1
Q ss_pred eEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc-ccccccccccCeEEEEecCCCCEEEEEeCCCeE
Q psy14961 11 KEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA-KKKTVATHTSFISCCIFPNSDQQILTGSGDCTC 89 (320)
Q Consensus 11 ~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v 89 (320)
....+..+ ..+.+++|+|++.++++++.++.|++||+........ ....+..|...+.++.|++++..+++++.|+.|
T Consensus 115 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 115 FISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp EEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 33334433 4566899999888888899999999999853221110 011345788899999999888899999999999
Q ss_pred EEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCc-----------c--c-
Q psy14961 90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHN-----------L--I- 154 (320)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~-----------~--~- 154 (320)
++||+++++.+..+..|...+.++++.+ +++.++ +++.|+.|++||+++++.+..+..+.. . +
T Consensus 194 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 271 (433)
T 3bws_A 194 HVFDLKTLAYKATVDLTGKWSKILLYDP--IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIA 271 (433)
T ss_dssp EEEETTTCCEEEEEECSSSSEEEEEEET--TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEE
T ss_pred EEEECCCceEEEEEcCCCCCeeEEEEcC--CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEE
Confidence 9999999988888888888898888865 567775 555899999999998877665433221 1 1
Q ss_pred c--------CCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeee
Q psy14961 155 T--------DDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGA 225 (320)
Q Consensus 155 ~--------~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 225 (320)
. .++.|++||+++++....+ .|...+.+++|+|+++.+ ++++.|+.+++||+.+++....+.... .+
T Consensus 272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---~~ 347 (433)
T 3bws_A 272 QFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFD---KP 347 (433)
T ss_dssp EEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSS---SE
T ss_pred ECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCC---CC
Confidence 1 3678999999998776655 355688999999999755 667899999999999887766655332 35
Q ss_pred EEEEEecCCcEEEEEeC---------------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC-CCceE
Q psy14961 226 TSVDFSVSGRLLFAGYN---------------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW-DTTLR 289 (320)
Q Consensus 226 ~~~~~s~~~~~l~~g~~---------------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~-D~~ir 289 (320)
..++|+|+|++|++++. ||.|.+||..+++.+..+.. ...+.+++|+|||++|++++. |++|+
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEE
Confidence 68999999999988876 57999999988888877765 457899999999999988764 99999
Q ss_pred eeecc
Q psy14961 290 DEESK 294 (320)
Q Consensus 290 ~~~~~ 294 (320)
+|+..
T Consensus 427 v~~~~ 431 (433)
T 3bws_A 427 VYRRD 431 (433)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 99975
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-31 Score=231.78 Aligned_cols=232 Identities=11% Similarity=0.055 Sum_probs=172.9
Q ss_pred EcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC---------Cc
Q psy14961 27 YAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE---------SS 97 (320)
Q Consensus 27 ~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~---------~~ 97 (320)
+.+++.+|++|+.||.|++||+..... ...+. ...|.++.+.+. +++++.|++|++|+.. ++
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~----~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKT----ITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSC----EEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcE----EEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 456888999999999999999853321 11222 345666667665 9999999999999765 34
Q ss_pred ceeeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961 98 QLLQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG 176 (320)
Q Consensus 98 ~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 176 (320)
+.+..+. .|.++|.+++++|..+++++++++.||.|++||+++++++.... ..
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~--------------------------~~ 168 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS--------------------------AK 168 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC--------------------------CC
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe--------------------------cC
Confidence 4343333 56678988887653368899999999999999998876543221 12
Q ss_pred CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE-eEEec-CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 177 HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV-ACYKK-DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 177 ~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~-~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
|...|.+++|+|+|.+|++|+.||.|++||+++++.. ..+.. +. ..+.+++|+|++.+|++|+ ++.|++||+.+.
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~--~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE--AKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT--SCEEEEEECTTSSEEEEEE-SSBEEEEETTSS
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC--CCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC
Confidence 4456899999999999999999999999999988765 44444 22 2468999999999999999 559999998876
Q ss_pred eEEEEeec---CCCcee--EEEECcCCCeEEEecC-CCceEeeecchH
Q psy14961 255 CRVNHLMG---HENRVS--CLQVSPDGTAFSSGSW-DTTLRDEESKNR 296 (320)
Q Consensus 255 ~~~~~~~~---h~~~i~--~i~~s~~~~~l~s~s~-D~~ir~~~~~~~ 296 (320)
.....+.. |...+. +++|+|+|++|++++. |+.+++|+....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 246 VGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp TTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 55444333 445554 6999999999999998 999999987544
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-31 Score=231.57 Aligned_cols=213 Identities=23% Similarity=0.334 Sum_probs=177.5
Q ss_pred ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC--CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEE
Q psy14961 59 KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE--SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIW 136 (320)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lw 136 (320)
..+.+|...|.++.|++++++|++|+.||.|++||+. +.+.+..+.+|...|.+++|.+..++++|++++.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 4577899999999999999999999999999999997 56777888899999999998765558899999999999999
Q ss_pred eCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeEe
Q psy14961 137 DMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEVA 214 (320)
Q Consensus 137 d~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~~ 214 (320)
|+.++... ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++......
T Consensus 85 d~~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 85 KEENGRWS-------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp EEETTEEE-------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred EcCCCcee-------------------------EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee
Confidence 98765411 23445568889999999999 9999999999999999998764322
Q ss_pred EEecCcceeeeEEEEEec-------------CCcEEEEEeCCCeEEEEcCCCC----eEEEEeecCCCceeEEEECcC--
Q psy14961 215 CYKKDSILFGATSVDFSV-------------SGRLLFAGYNDYTINVWDSLKC----CRVNHLMGHENRVSCLQVSPD-- 275 (320)
Q Consensus 215 ~~~~~~~~~~~~~~~~s~-------------~~~~l~~g~~dg~v~~wd~~~~----~~~~~~~~h~~~i~~i~~s~~-- 275 (320)
..........+.+++|+| ++.+|++|+.||.|++||+... .....+.+|...|.+++|+|+
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 221111122467899999 6999999999999999997653 345667889999999999999
Q ss_pred -CCeEEEecCCCceEeeecchH
Q psy14961 276 -GTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 276 -~~~l~s~s~D~~ir~~~~~~~ 296 (320)
+++|++++.|++|++|+....
T Consensus 220 ~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 220 LRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp SSEEEEEEETTSCEEEEEESST
T ss_pred CCCeEEEEeCCCEEEEEeCCCC
Confidence 899999999999999997653
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=1.3e-28 Score=218.23 Aligned_cols=254 Identities=15% Similarity=0.202 Sum_probs=199.8
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ 79 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 79 (320)
|++||..+++....+..+ ..+.+++|+|++++| ++++.|+.|++||+... .....+..+ ..+.++.|++++++
T Consensus 14 v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~----~~~~~~~~~-~~v~~~~~spdg~~ 87 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN----NVIATVPAG-SSPQGVAVSPDGKQ 87 (391)
T ss_dssp EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT----EEEEEEECS-SSEEEEEECTTSSE
T ss_pred EEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCC----eEEEEEECC-CCccceEECCCCCE
Confidence 579999999888776655 458999999999977 67779999999997422 223333333 38899999999998
Q ss_pred EEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961 80 ILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD 157 (320)
Q Consensus 80 l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d 157 (320)
+++++ .|+.|++||+.+++.+..+..+ ..+.++++ +++++.+ ++++.|+.|++||+.+++.+..+
T Consensus 88 l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~---------- 154 (391)
T 1l0q_A 88 VYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLAL--SPDGKKLYVTNNGDKTVSVINTVTKAVINTV---------- 154 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEE----------
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEE--CCCCCEEEEEeCCCCEEEEEECCCCcEEEEE----------
Confidence 76554 6799999999999887777644 45677766 4567777 68888999999998877654432
Q ss_pred CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcE
Q psy14961 158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRL 236 (320)
Q Consensus 158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 236 (320)
..+ ..+.+++|+|+++.+ ++++.|+.|++||+++++......... .+..++|+|++++
T Consensus 155 -----------------~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 155 -----------------SVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA---APSGIAVNPEGTK 213 (391)
T ss_dssp -----------------ECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---EEEEEEECTTSSE
T ss_pred -----------------ecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC---CccceEECCCCCE
Confidence 222 346889999999987 677889999999999987766555433 3567899999999
Q ss_pred EEEEe---CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeE-EEecCCCceEeeecch
Q psy14961 237 LFAGY---NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAF-SSGSWDTTLRDEESKN 295 (320)
Q Consensus 237 l~~g~---~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l-~s~s~D~~ir~~~~~~ 295 (320)
|++++ .++.|.+||+.++..+..+..|. .+.+++|+|++++| ++++.|++|++|+...
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 99887 68999999999888888777765 47899999999877 7889999999999754
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=1.5e-30 Score=226.14 Aligned_cols=229 Identities=12% Similarity=0.089 Sum_probs=187.2
Q ss_pred cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc---eeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEe
Q psy14961 62 ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ---LLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWD 137 (320)
Q Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd 137 (320)
.+|...|.++.|++++++|++++.|+.|++|++.++. ....+..|...|.++++.+ +++ .|++++.||.|++||
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID--NTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE--SSSEEEEEEETTSCEEEEC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC--CCCcEEEEEcCCCeEEEEE
Confidence 4789999999999999999999999999999998776 3445567999999999876 488 999999999999999
Q ss_pred C-CCCcEEEEecc--CCcc--------------ccCCCeEEEEECcC---------CeeeeeecCCCCCeEEEEEcCCCC
Q psy14961 138 M-RTGYCVQSFEG--HHNL--------------ITDDKLVNIWDMRT---------GYCVQSFEGHQSDVNSVKFHPSGD 191 (320)
Q Consensus 138 ~-~~~~~~~~~~~--~~~~--------------~~~d~~i~iwd~~~---------~~~~~~~~~~~~~v~~v~~~p~g~ 191 (320)
+ ..+.. ..+.+ |... .+.|+.|++||+++ ++++..+. |...|.+++|+|++
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred eccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 9 77654 34444 3322 13689999999988 77777776 88999999999987
Q ss_pred EEEEeeCCCeEEEEECCC-CeeEeEEecCcceeeeEEEEEec-CCcEEEEEeCCCeEEEEcCCCC------eEEEEeecC
Q psy14961 192 AVATGSDDATCRLFDLRA-DKEVACYKKDSILFGATSVDFSV-SGRLLFAGYNDYTINVWDSLKC------CRVNHLMGH 263 (320)
Q Consensus 192 ~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~~dg~v~~wd~~~~------~~~~~~~~h 263 (320)
+++++.|+.|++||++. ...............+.+++|+| ++.++++|+.+|.|++|+.... .....+..|
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 99999999999999987 44321111111123467899999 9999999999999999998765 666777777
Q ss_pred CC---------ceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 264 EN---------RVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 264 ~~---------~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
.. .|.+++|+|++++|++|+.|++|++|+....
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 65 9999999999999999999999999997543
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.3e-29 Score=229.36 Aligned_cols=245 Identities=14% Similarity=0.069 Sum_probs=192.4
Q ss_pred cceEEEEEcCCCCEEEEecCCCeEEEEEecccC---Cccc-c--------------------------------------
Q psy14961 20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALED---DSSA-K-------------------------------------- 57 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~---~~~~-~-------------------------------------- 57 (320)
.++.+++|+|+|++|+++ .++.|++||+.... .... .
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 457889999999976666 57899999975432 0000 0
Q ss_pred -----------cccccccccCeEEEEecCCCCEE-EEEeCCCeEEEEECC--Ccceeeecc--cCccceeEEEEeeCCCC
Q psy14961 58 -----------KKTVATHTSFISCCIFPNSDQQI-LTGSGDCTCALWDVE--SSQLLQSFH--GHTGELMDLDLAPSETG 121 (320)
Q Consensus 58 -----------~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~ 121 (320)
......|...|.++.|++++++| ++++.||.|++||+. +++.+..+. .|...+.+++|. +++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~~ 161 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA--EDD 161 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC--TTS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc--CCC
Confidence 00012345579999999999996 888899999999998 787777765 456788888775 468
Q ss_pred CEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC---CCEEEEeeC
Q psy14961 122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS---GDAVATGSD 198 (320)
Q Consensus 122 ~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~---g~~l~s~s~ 198 (320)
++|++++.+|.+++|++.++.... .+...+.+|...|.+++|+|+ +++|++++.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~-----------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 218 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEK-----------------------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR 218 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSS-----------------------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEET
T ss_pred CEEEEEeCCCcEEEEecCCccccc-----------------------ccceeeecccCceEEEEEcCCCCCCcEEEEEcC
Confidence 999999999999999987654210 022345678899999999999 999999999
Q ss_pred CCeEEEEECCCCeeEeEEe-cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec---------------
Q psy14961 199 DATCRLFDLRADKEVACYK-KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG--------------- 262 (320)
Q Consensus 199 dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~--------------- 262 (320)
|+.|++||+++++.+..+. .+. ..+.+++|+ ++.+|++|+.|+.|++||+.+++.+..+..
T Consensus 219 d~~i~vwd~~~~~~~~~~~~~h~--~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 219 DEHIKISHYPQCFIVDKWLFGHK--HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp TSCEEEEEESCTTCEEEECCCCS--SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred CCcEEEEECCCCceeeeeecCCC--CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence 9999999999877665432 222 246789999 999999999999999999998887776652
Q ss_pred ----------CCCceeEEEECcCCCeEEEec-CCCceEeeec
Q psy14961 263 ----------HENRVSCLQVSPDGTAFSSGS-WDTTLRDEES 293 (320)
Q Consensus 263 ----------h~~~i~~i~~s~~~~~l~s~s-~D~~ir~~~~ 293 (320)
+...|.+|+|+|++++|++++ .|++|++|+.
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 245799999999999999998 8999999998
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.4e-32 Score=244.09 Aligned_cols=233 Identities=11% Similarity=0.124 Sum_probs=186.8
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc-----CeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS-----FISCCIFPNSDQQILTGSGDCTCALW 92 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~dg~v~iw 92 (320)
|..+|.+++|+|+|.+||+++.||.+++|+... ....+. |.. .+.+++|+|++++|++|+.||+|++|
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 468899999999999999999999999998421 233344 554 49999999999999999999999999
Q ss_pred ECCCcce-------eeec----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE---EEEe-ccCCcc----
Q psy14961 93 DVESSQL-------LQSF----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC---VQSF-EGHHNL---- 153 (320)
Q Consensus 93 d~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~---~~~~-~~~~~~---- 153 (320)
|+.++.. +..+ .+|...|.+++|+| +| +++++.|+.+++||+..+.. ...+ .+|...
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP--dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE--DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET--TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcC--Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 9988753 4555 56778999998875 56 88899999999999987763 2344 234311
Q ss_pred --------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE--cCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961 154 --------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF--HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF 223 (320)
Q Consensus 154 --------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~--~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 223 (320)
.+.++.|++||+.+++......+|...|..++| +|++..++++++||+ ++|..+.
T Consensus 233 aFsg~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~-------------- 297 (588)
T 2j04_A 233 KIVDYKVVLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE-------------- 297 (588)
T ss_dssp EEETTEEEEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS--------------
T ss_pred EEECCEEEEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc--------------
Confidence 234789999999988774444489999999999 999999999999999 9999771
Q ss_pred eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961 224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~ 284 (320)
+.|+|++..+++. |+++++|+..... ...+. +...|.+++|||||+.+|+++.
T Consensus 298 ----~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~-~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 298 ----LHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYE-TTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp ----EEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSC-CEEEEEEEEECTTSSEEEEEEE
T ss_pred ----EEECCCceEEEEc--CCEEEEEECCCCc-eeeec-cceEEEEEEECCCCCEEEEEEe
Confidence 3489999888775 8999999875433 33333 3667999999999999999974
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=5.5e-30 Score=230.80 Aligned_cols=233 Identities=18% Similarity=0.176 Sum_probs=176.2
Q ss_pred ccccccCeEEEEecC-CCCEEEEEeCCCeEEEEECCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 61 VATHTSFISCCIFPN-SDQQILTGSGDCTCALWDVESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 61 ~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
...|...|+|+.|+| ++..|++|+.||+|+|||+.++.. ...+.+|.+.|.+++|+|. ++++|++++.||.|++||
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCEEEEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEee
Confidence 346778899999987 456899999999999999987653 4456789999999999764 578999999999999999
Q ss_pred CCCCcEEEEeccCC--------------cc---ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCC
Q psy14961 138 MRTGYCVQSFEGHH--------------NL---ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDD 199 (320)
Q Consensus 138 ~~~~~~~~~~~~~~--------------~~---~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~d 199 (320)
++++........+. .. .+.|+.|++||++ ++++..+.+|...|.+++|+|++. +|++|+.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 98764332222111 11 1368899999986 456778899999999999999976 68899999
Q ss_pred CeEEEEECCCCeeEeEEec-CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC------ceeEEEE
Q psy14961 200 ATCRLFDLRADKEVACYKK-DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN------RVSCLQV 272 (320)
Q Consensus 200 g~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~------~i~~i~~ 272 (320)
+.|++||++..+....+.. ......+.+++|+|+|++|++|+.||.|++||+.++.....+.+|.. .+....|
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW 352 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence 9999999987654322211 11112467889999999999999999999999988777666666543 2334566
Q ss_pred CcCCCeEEEec------------CCCceEeeecch
Q psy14961 273 SPDGTAFSSGS------------WDTTLRDEESKN 295 (320)
Q Consensus 273 s~~~~~l~s~s------------~D~~ir~~~~~~ 295 (320)
+|++.++++++ .+++|++|+...
T Consensus 353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 67666666554 346899999643
No 114
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4.2e-30 Score=229.02 Aligned_cols=251 Identities=18% Similarity=0.215 Sum_probs=195.8
Q ss_pred CeEeeccccee----EEEEEeCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcc---cccccccccccCeEEEE
Q psy14961 1 MIIWDGLTQTK----EHSVTMPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSS---AKKKTVATHTSFISCCI 72 (320)
Q Consensus 1 ~~~W~~~~~~~----~~~~~~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~---~~~~~~~~h~~~v~~~~ 72 (320)
|+||+..+... ...+..|...|.+++|+| ++++|++|+.||.|++|++....... .....+.+|...|.++.
T Consensus 59 i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 138 (402)
T 2aq5_A 59 FLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVA 138 (402)
T ss_dssp EEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEE
T ss_pred EEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEE
Confidence 46899865432 223456888999999999 99999999999999999986432111 23456778999999999
Q ss_pred ecCCC-CEEEEEeCCCeEEEEECCCcceeeec--ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-c
Q psy14961 73 FPNSD-QQILTGSGDCTCALWDVESSQLLQSF--HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-E 148 (320)
Q Consensus 73 ~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~ 148 (320)
|++++ ..+++++.||.|++||+.+++.+..+ ..|...|.++++++ +++.|++++.|+.|++||+++++.+..+ .
T Consensus 139 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 216 (402)
T 2aq5_A 139 WHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR--DGALICTSCRDKRVRVIEPRKGTVVAEKDR 216 (402)
T ss_dssp ECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT--TSSCEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC--CCCEEEEEecCCcEEEEeCCCCceeeeecc
Confidence 99987 68999999999999999999988888 78999999988865 6889999999999999999999888777 4
Q ss_pred cCCcc---------------c----cCCCeEEEEECcCCee-eeee-cCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEE
Q psy14961 149 GHHNL---------------I----TDDKLVNIWDMRTGYC-VQSF-EGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFD 206 (320)
Q Consensus 149 ~~~~~---------------~----~~d~~i~iwd~~~~~~-~~~~-~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd 206 (320)
.|... . ..++.|++||++++.. .... ..|...+.+++|+|++++|+ +++.|+.|++||
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d 296 (402)
T 2aq5_A 217 PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFE 296 (402)
T ss_dssp SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEE
T ss_pred CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEE
Confidence 44321 1 2578999999988654 3222 25777899999999999986 555799999999
Q ss_pred CCCCee-EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961 207 LRADKE-VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC 255 (320)
Q Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~ 255 (320)
+.++++ +...........+.+++|+|++.++++ .++.+++|++.+..
T Consensus 297 ~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 297 ITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp ECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred ecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 988763 322222211224678999999998875 45689999976643
No 115
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=5.7e-29 Score=215.63 Aligned_cols=230 Identities=17% Similarity=0.249 Sum_probs=179.8
Q ss_pred CeEeecccce----eEEEEEeCccceEEEEEcC--CCCEEEEecCCCeEEEEEecccCCcc-----cccccccccccCeE
Q psy14961 1 MIIWDGLTQT----KEHSVTMPATWVMACAYAP--SGSVVASGGLDNKVTVYAIALEDDSS-----AKKKTVATHTSFIS 69 (320)
Q Consensus 1 ~~~W~~~~~~----~~~~~~~~~~~V~~~~~~~--~~~~l~s~~~dg~i~v~~~~~~~~~~-----~~~~~~~~h~~~v~ 69 (320)
|+|||..+.. ....+..|...|.+++|+| ++++|++|+.||.|++||+....... .....+..|...|.
T Consensus 35 i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 114 (351)
T 3f3f_A 35 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY 114 (351)
T ss_dssp EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee
Confidence 5799998763 4445567889999999999 69999999999999999986432211 23455678999999
Q ss_pred EEEecCC--CCEEEEEeCCCeEEEEECCCcceeeecc-------------cCccceeEEEEeeC-CCCCEEEEEeCCCeE
Q psy14961 70 CCIFPNS--DQQILTGSGDCTCALWDVESSQLLQSFH-------------GHTGELMDLDLAPS-ETGNTFVSGSSDKLV 133 (320)
Q Consensus 70 ~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~~-~~~~~l~s~~~dg~i 133 (320)
++.|.++ +..+++++.||.|++||+.+++.+..+. .|...+.+++++|. .++..+++++.|+.+
T Consensus 115 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~ 194 (351)
T 3f3f_A 115 SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAI 194 (351)
T ss_dssp EEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEE
T ss_pred EEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcE
Confidence 9999998 8999999999999999998876544332 56778888888764 236799999999999
Q ss_pred EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCC----CEEEEeeCCCeEEEEECCC
Q psy14961 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSG----DAVATGSDDATCRLFDLRA 209 (320)
Q Consensus 134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g----~~l~s~s~dg~i~iwd~~~ 209 (320)
.+|+...+.. ..+..+.+|...|.+++|+|++ ++|++++.||.|++||++.
T Consensus 195 ~~~~~~~~~~-------------------------~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 195 IYQRGKDGKL-------------------------HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEEECTTSCE-------------------------EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EEEccCCCce-------------------------eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 8777655432 1234566799999999999998 7999999999999999876
Q ss_pred C----------------------------------------------eeEeEEecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961 210 D----------------------------------------------KEVACYKKDSILFGATSVDFSVSGRLLFAGYND 243 (320)
Q Consensus 210 ~----------------------------------------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d 243 (320)
+ +.+..+..+. ..+.+++|+|++++|++|+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~d 327 (351)
T 3f3f_A 250 KLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHN--GEVWSVSWNLTGTILSSAGDD 327 (351)
T ss_dssp CC---------------------------------------CCSEEEEEEEEECTTS--SCEEEEEECSSSCCEEEEETT
T ss_pred CcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccc--ccEEEEEEcCCCCEEEEecCC
Confidence 4 1222222221 246889999999999999999
Q ss_pred CeEEEEcCCCCeEE
Q psy14961 244 YTINVWDSLKCCRV 257 (320)
Q Consensus 244 g~v~~wd~~~~~~~ 257 (320)
|.|++||+......
T Consensus 328 g~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 328 GKVRLWKATYSNEF 341 (351)
T ss_dssp SCEEEEEECTTSCE
T ss_pred CcEEEEecCcCcch
Confidence 99999998765433
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1e-28 Score=216.78 Aligned_cols=224 Identities=13% Similarity=0.103 Sum_probs=171.1
Q ss_pred cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeC
Q psy14961 60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLVNIWDM 138 (320)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~ 138 (320)
....|...|.++.|++++++|++|+.+ .+++|++++++....... ..+..+++.+. ++.+ ++++.|+.|++||+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEM--RHLSKVRMLHR--TNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEEC--SCCCEEEECTT--SSEEEEECSSTTEEEEEET
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeec--CCeEEEEEcCC--CCEEEEEECCccEEEEEEC
Confidence 456799999999999999999988866 478999988766544332 24566666554 4555 67888899999999
Q ss_pred CCCcEEEEeccCC-----------ccccCCCeEEEEECcCC-eeeeeecCCCCCeEEEEEcCCCCEEEE--eeCCCeEEE
Q psy14961 139 RTGYCVQSFEGHH-----------NLITDDKLVNIWDMRTG-YCVQSFEGHQSDVNSVKFHPSGDAVAT--GSDDATCRL 204 (320)
Q Consensus 139 ~~~~~~~~~~~~~-----------~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~v~~~p~g~~l~s--~s~dg~i~i 204 (320)
.+++.+..+..+. ..+..++.|++||+.++ +.+..+.. +...++++| .+++. |+.||.|++
T Consensus 89 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 89 VKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred CCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 9998877664322 22345789999999987 66666554 455677777 56655 688999999
Q ss_pred EECCCCee----------------EeEEecCcceeeeEEEEEecCCcEEEEEeCCCe-EEEEcCCCCeEEEEee-c-CCC
Q psy14961 205 FDLRADKE----------------VACYKKDSILFGATSVDFSVSGRLLFAGYNDYT-INVWDSLKCCRVNHLM-G-HEN 265 (320)
Q Consensus 205 wd~~~~~~----------------~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~-v~~wd~~~~~~~~~~~-~-h~~ 265 (320)
||+++++. +..+..+. ..+.+++|+|+|++|++|+.|++ |++||+.++..+.++. + |..
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~--~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHT--NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp EECCC------------------CCEEECCCS--SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred EECCCCCccccccccccccccCcccEEEEccC--CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence 99987541 23333332 24688999999999999999998 9999999999998888 5 999
Q ss_pred ceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 266 RVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 266 ~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
.|.+++|+||+++|++++.|++|++|+...
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 999999999999999999999999999754
No 117
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.7e-28 Score=216.11 Aligned_cols=202 Identities=12% Similarity=0.144 Sum_probs=155.9
Q ss_pred CccceEEEEEcCCCCEEEE--ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 18 PATWVMACAYAPSGSVVAS--GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s--~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
+..++.+++|+|||++|++ ++.|++|++||+... .....+ .|...|.++.|+|+++++++++.| .+++|+..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~----~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL----TEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT----EEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETT
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC----cEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEec
Confidence 3457889999999998764 557899999997521 222233 477889999999999999998855 56666666
Q ss_pred Ccceee--ecccCccceeEEEEeeCCCCCEEEEEeCCC----eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961 96 SSQLLQ--SFHGHTGELMDLDLAPSETGNTFVSGSSDK----LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY 169 (320)
Q Consensus 96 ~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg----~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 169 (320)
+++.+. ....|...+.+++|.| ++..+++++.|+ .+++||+....... .
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fsp--dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~-----------------------~ 260 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIA--DDTVLIAASLKKGKGIVLTKISIKSGNTSV-----------------------L 260 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEE--TTEEEEEEEESSSCCEEEEEEEEETTEEEE-----------------------E
T ss_pred cCcceeeeecCCCCCCEEEEEEcC--CCCEEEEEecCCcceeEEeecccccceecc-----------------------e
Confidence 665442 3456788898888876 578999998877 56777765443211 1
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe-cCcceeeeEEEEEecCCcEEEEEeCCCeEEE
Q psy14961 170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK-KDSILFGATSVDFSVSGRLLFAGYNDYTINV 248 (320)
Q Consensus 170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~ 248 (320)
....+.+|...|.+++|+|+|++||+|+.|++|+|||+++++.+..+. .+. ..+.+++|+|||++||+|+.|++|+|
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~--~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS--FAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS--SCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc--CCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 234466788999999999999999999999999999999998876653 232 24689999999999999999999999
Q ss_pred EcCC
Q psy14961 249 WDSL 252 (320)
Q Consensus 249 wd~~ 252 (320)
||+.
T Consensus 339 w~ip 342 (365)
T 4h5i_A 339 IKLP 342 (365)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9974
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=8.2e-29 Score=216.72 Aligned_cols=238 Identities=16% Similarity=0.190 Sum_probs=188.4
Q ss_pred CeEeeccc-ceeE-EEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEe--cCC
Q psy14961 1 MIIWDGLT-QTKE-HSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF--PNS 76 (320)
Q Consensus 1 ~~~W~~~~-~~~~-~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~ 76 (320)
|+|||..+ +... ..+..|...|.+++|+|++++|++++.||.|++||+... ....+..|...|.++.| +++
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~v~~~~~~~~~~ 140 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN-----QAIQIAQHDAPVKTIHWIKAPN 140 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-----EEEEEEECSSCEEEEEEEECSS
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC-----CceeeccccCceEEEEEEeCCC
Confidence 57999987 4443 456678999999999999999999999999999998532 12235679999999999 888
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe---------
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF--------- 147 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~--------- 147 (320)
+..+++++.||.|++||+.+++++..+..+. .+.++.+. +..+++++.++.+++||++........
T Consensus 141 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 215 (368)
T 3mmy_A 141 YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI----YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215 (368)
T ss_dssp CEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE----TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCE
T ss_pred CCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec----CCeeEEEeCCCcEEEEEeccccchhhhccccccCCC
Confidence 8899999999999999999998888877554 45444443 358899999999999999765322111
Q ss_pred ------ccC------CccccCCCeEEEEECcCC---eeeeeecCCCC------------CeEEEEEcCCCCEEEEeeCCC
Q psy14961 148 ------EGH------HNLITDDKLVNIWDMRTG---YCVQSFEGHQS------------DVNSVKFHPSGDAVATGSDDA 200 (320)
Q Consensus 148 ------~~~------~~~~~~d~~i~iwd~~~~---~~~~~~~~~~~------------~v~~v~~~p~g~~l~s~s~dg 200 (320)
... ....+.++.|++||++.. .....+.+|.. .|.+++|+|++++|++++.||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg 295 (368)
T 3mmy_A 216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG 295 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS
T ss_pred ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC
Confidence 111 112246899999999887 55677777776 799999999999999999999
Q ss_pred eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961 201 TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWD 250 (320)
Q Consensus 201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd 250 (320)
.|++||+++++.+..+..+. ..+.+++|+|+|++|++|+.|+..+.|+
T Consensus 296 ~i~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 296 RFSFWDKDARTKLKTSEQLD--QPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp CEEEEETTTTEEEEECCCCS--SCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred eEEEEECCCCcEEEEecCCC--CCceEEEECCCCCeEEEEeccccccccc
Confidence 99999999988876665433 2468899999999999999887655544
No 119
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.4e-28 Score=218.07 Aligned_cols=238 Identities=18% Similarity=0.323 Sum_probs=189.1
Q ss_pred ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961 21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL 100 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (320)
+++.++|++++ +|++| .|++|+|||..... ......+..|...|+++.|++++++|++|+.||+|++||+++++.+
T Consensus 107 y~~~l~wS~~n-~lAvg-ld~tV~lWd~~tg~--~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cceeEEECCCC-EEEEE-eCCEEEEEECCCCC--EEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 56678999864 66665 59999999975321 1122234578889999999999999999999999999999999999
Q ss_pred eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCC
Q psy14961 101 QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSD 180 (320)
Q Consensus 101 ~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 180 (320)
..+.+|...+.++.+ ++..|++|+.|+.+++||..... ..+..+.+|...
T Consensus 183 ~~~~~h~~~v~~~s~----~~~~l~sgs~d~~i~~~d~~~~~--------------------------~~~~~~~~h~~~ 232 (420)
T 4gga_A 183 RNMTSHSARVGSLSW----NSYILSSGSRSGHIHHHDVRVAE--------------------------HHVATLSGHSQE 232 (420)
T ss_dssp EEECCCSSCEEEEEE----ETTEEEEEETTSEEEEEETTSSS--------------------------CEEEEEECCSSC
T ss_pred EEEeCCCCceEEEee----CCCEEEEEeCCCceeEeeecccc--------------------------eeeEEecccccc
Confidence 999999999887765 35799999999999999986532 123445678899
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE----eEEecCcceeeeEEEEEecCCc-EEEE--EeCCCeEEEEcCCC
Q psy14961 181 VNSVKFHPSGDAVATGSDDATCRLFDLRADKEV----ACYKKDSILFGATSVDFSVSGR-LLFA--GYNDYTINVWDSLK 253 (320)
Q Consensus 181 v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~-~l~~--g~~dg~v~~wd~~~ 253 (320)
+..+.++|++.++++++.|+.+++|+...++.. .....+ ...+..++|+|.+. ++++ |+.|++|++||+.+
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~--~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH--QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC--SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred eeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeeccc--CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence 999999999999999999999999999876432 111111 12357888999765 5555 45799999999999
Q ss_pred CeEEEEeecCCCceeEEEECcCCCeEEEec--CCCceEeeecch
Q psy14961 254 CCRVNHLMGHENRVSCLQVSPDGTAFSSGS--WDTTLRDEESKN 295 (320)
Q Consensus 254 ~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s--~D~~ir~~~~~~ 295 (320)
+.....+..| ..+.++.|+|+++.|++++ .|++|++|+..+
T Consensus 311 ~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~ 353 (420)
T 4gga_A 311 GACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 353 (420)
T ss_dssp TEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred cccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence 9888777655 4688999999999988765 799999999743
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.7e-28 Score=217.86 Aligned_cols=282 Identities=15% Similarity=0.207 Sum_probs=183.3
Q ss_pred CeEeecccceeEEEEE-------------eCccceEEEEEcC-CCCEEEEecCCCeEEEEEecccCCccccccccccccc
Q psy14961 1 MIIWDGLTQTKEHSVT-------------MPATWVMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS 66 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~-------------~~~~~V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~ 66 (320)
|+|||..+........ .|...|.+++|+| ++.+|++++.||.|++|++... .... ...+..
T Consensus 68 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~-~~~~~~ 142 (408)
T 4a11_B 68 IVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL----QTAD-VFNFEE 142 (408)
T ss_dssp EEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT----EEEE-EEECSS
T ss_pred EEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC----ccce-eccCCC
Confidence 4799998776543332 3788999999999 7789999999999999998532 1122 223667
Q ss_pred CeEEEEecCC---CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCC-EEEEEeCCCeEEEEeCCCCc
Q psy14961 67 FISCCIFPNS---DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDKLVNIWDMRTGY 142 (320)
Q Consensus 67 ~v~~~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg~i~lwd~~~~~ 142 (320)
.+.++.+.+. +..+++++.|+.|++||+.+++.+..+..|...|.+++++| ++. .|++++.||.|++||++.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 143 TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP--RYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS--SCTTEEEEEETTSCEEEEETTCSS
T ss_pred ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC--CCCcEEEEEcCCCcEEEEECCCCC
Confidence 7888888764 45899999999999999999998889999999999998865 455 68999999999999997653
Q ss_pred -EEEEe---------------------------ccCCc---cccCCCeEEEEECcCCeeeeeecCCC-----CCeEEEEE
Q psy14961 143 -CVQSF---------------------------EGHHN---LITDDKLVNIWDMRTGYCVQSFEGHQ-----SDVNSVKF 186 (320)
Q Consensus 143 -~~~~~---------------------------~~~~~---~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~v~~ 186 (320)
++..+ .+... ....|+.|++||+++++......++. ..+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (408)
T 4a11_B 221 GCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVS 300 (408)
T ss_dssp CCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEEC
T ss_pred cccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEe
Confidence 22222 11111 11368899999999887655443321 12222222
Q ss_pred cCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCc
Q psy14961 187 HPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENR 266 (320)
Q Consensus 187 ~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~ 266 (320)
...+..+++++.|+.|++||+.+++.+..+..+.. .+.+++|+|++++|++|+.||.|++||..+.+++.....+..
T Consensus 301 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~- 377 (408)
T 4a11_B 301 CGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK--TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT- 377 (408)
T ss_dssp CSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS--CEEEEEEETTTTEEEEEETTSCEEEEEECC-------------
T ss_pred cCCCceEEEEecCCEEEEEECcCCcceeeeccCCC--eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe-
Confidence 33455677778899999999999888777664432 467899999999999999999999999888776654433322
Q ss_pred eeEEEECc-CCCeEEEecCCCceEeeecc
Q psy14961 267 VSCLQVSP-DGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 267 i~~i~~s~-~~~~l~s~s~D~~ir~~~~~ 294 (320)
...++| +...+.+++.|+.+++|+..
T Consensus 378 --~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 378 --KSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp -----------------------------
T ss_pred --ccccccccceeecccCccCceeecCCc
Confidence 233444 45567788899999999863
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=240.47 Aligned_cols=211 Identities=23% Similarity=0.338 Sum_probs=174.8
Q ss_pred cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC--CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 60 TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE--SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
.+.+|.+.|.++.|+++++++++|+.||.|++||+. ++..+..+.+|.+.|.++++.+..+++.|++|+.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 467899999999999999999999999999999997 557778889999999999997765689999999999999999
Q ss_pred CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC--CCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961 138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS--GDAVATGSDDATCRLFDLRADKEVAC 215 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~--g~~l~s~s~dg~i~iwd~~~~~~~~~ 215 (320)
+.++.. .....+.+|...|.+++|+|+ ++.+++|+.||.|++||++.+.....
T Consensus 84 ~~~~~~-------------------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 84 EENGRW-------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp EETTEE-------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred CCCCcc-------------------------cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 876531 123445678899999999999 99999999999999999987633221
Q ss_pred EecCcceeeeEEEEEec-------------CCcEEEEEeCCCeEEEEcCCCC----eEEEEeecCCCceeEEEECcC---
Q psy14961 216 YKKDSILFGATSVDFSV-------------SGRLLFAGYNDYTINVWDSLKC----CRVNHLMGHENRVSCLQVSPD--- 275 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~s~-------------~~~~l~~g~~dg~v~~wd~~~~----~~~~~~~~h~~~i~~i~~s~~--- 275 (320)
.........+.++.|+| ++.++++|+.||.|++||+... .....+.+|..+|++++|+|+
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~ 218 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCC
Confidence 11111123467899999 5899999999999999997665 556778899999999999999
Q ss_pred CCeEEEecCCCceEeeecch
Q psy14961 276 GTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 276 ~~~l~s~s~D~~ir~~~~~~ 295 (320)
+++|++|+.|++|++|+...
T Consensus 219 ~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 219 RSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp SEEEEEEESSSCEEEEEESS
T ss_pred CCEEEEEecCCEEEEecCCC
Confidence 99999999999999999755
No 122
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=4.5e-28 Score=217.98 Aligned_cols=251 Identities=18% Similarity=0.265 Sum_probs=193.3
Q ss_pred ceEEEEEcCCC----------CEEEEecC----CCeEEEEEecccCC----------------------c-ccccccccc
Q psy14961 21 WVMACAYAPSG----------SVVASGGL----DNKVTVYAIALEDD----------------------S-SAKKKTVAT 63 (320)
Q Consensus 21 ~V~~~~~~~~~----------~~l~s~~~----dg~i~v~~~~~~~~----------------------~-~~~~~~~~~ 63 (320)
+..++.|.|+. .+++.|.. .+.|.++++.+... . .........
T Consensus 47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 126 (430)
T 2xyi_A 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN 126 (430)
T ss_dssp CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence 44788888865 35666654 45688887642100 0 011233457
Q ss_pred cccCeEEEEecCC-CCEEEEEeCCCeEEEEECCC----------cceeeecccCccceeEEEEeeCCCCC-EEEEEeCCC
Q psy14961 64 HTSFISCCIFPNS-DQQILTGSGDCTCALWDVES----------SQLLQSFHGHTGELMDLDLAPSETGN-TFVSGSSDK 131 (320)
Q Consensus 64 h~~~v~~~~~~~~-~~~l~s~~~dg~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~~~dg 131 (320)
|...|.++.|.++ +.++++++.||.|++|++.+ ..++..+.+|...+.+++|.+. +. .|++|+.||
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg 204 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLSASDDH 204 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTT--STTEEEEECTTS
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEEEeCCC
Confidence 8999999999986 57889999999999999976 5667788899999999988654 55 999999999
Q ss_pred eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCC
Q psy14961 132 LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRAD 210 (320)
Q Consensus 132 ~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~ 210 (320)
.|++||+..+.... .. ..+...+.+|...|.+++|+| ++..|++++.|+.|++||++.+
T Consensus 205 ~i~vwd~~~~~~~~------------~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 205 TICLWDINATPKEH------------RV--------IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp CEEEEETTSCCBGG------------GE--------EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred eEEEEeCCCCCCCC------------ce--------eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 99999998642100 00 012344567999999999999 6788999999999999999876
Q ss_pred ---eeEeEEecCcceeeeEEEEEecCCc-EEEEEeCCCeEEEEcCCC-CeEEEEeecCCCceeEEEECcCCC-eEEEecC
Q psy14961 211 ---KEVACYKKDSILFGATSVDFSVSGR-LLFAGYNDYTINVWDSLK-CCRVNHLMGHENRVSCLQVSPDGT-AFSSGSW 284 (320)
Q Consensus 211 ---~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~~dg~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~ 284 (320)
+.+..+..+. ..+.+++|+|++. ++++|+.||.|++||+.. ..++..+.+|...|.+++|+|+++ +|++++.
T Consensus 265 ~~~~~~~~~~~~~--~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 265 NTSKPSHTVDAHT--AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp CSSSCSEEEECCS--SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCcceeEeecCC--CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC
Confidence 3333333322 2467899999987 789999999999999887 566788889999999999999985 6999999
Q ss_pred CCceEeeecch
Q psy14961 285 DTTLRDEESKN 295 (320)
Q Consensus 285 D~~ir~~~~~~ 295 (320)
|++|++|+...
T Consensus 343 d~~i~iwd~~~ 353 (430)
T 2xyi_A 343 DRRLHVWDLSK 353 (430)
T ss_dssp TSCCEEEEGGG
T ss_pred CCcEEEEeCCC
Confidence 99999999765
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.8e-26 Score=207.14 Aligned_cols=269 Identities=10% Similarity=0.084 Sum_probs=200.5
Q ss_pred ccceEEEE---EcCCCCEEEEe--------------cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961 19 ATWVMACA---YAPSGSVVASG--------------GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL 81 (320)
Q Consensus 19 ~~~V~~~~---~~~~~~~l~s~--------------~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 81 (320)
...+..++ |+|++..++.. +.++.+.+|.++...........+..+ ..+.++.|++++..++
T Consensus 60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~ 138 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAI 138 (433)
T ss_dssp TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEE
T ss_pred CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEE
Confidence 34566777 88887766543 233334566554322211222333333 3455788888666677
Q ss_pred EEeCCCeEEEEECCCcceee-----ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc---
Q psy14961 82 TGSGDCTCALWDVESSQLLQ-----SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--- 153 (320)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~--- 153 (320)
+++.|+.|++||+.+++... .+.+|...+.++++. +++..+++++.|+.|++||+.+++.+..+..+...
T Consensus 139 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 216 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP--EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI 216 (433)
T ss_dssp EBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG--GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE
T ss_pred EeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc--CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE
Confidence 77788999999999988776 455788889888874 46789999999999999999988877666543321
Q ss_pred -----------c--cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee--------CCCeEEEEECCCCee
Q psy14961 154 -----------I--TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS--------DDATCRLFDLRADKE 212 (320)
Q Consensus 154 -----------~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s--------~dg~i~iwd~~~~~~ 212 (320)
+ ..++.|++||+++++.+..+..+ ..+.+++|+|+|+.+++++ .|+.|++||+++++.
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 1 25789999999999888877654 4589999999999998887 588999999998876
Q ss_pred EeEEecCcceeeeEEEEEecCCcEE-EEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC-------
Q psy14961 213 VACYKKDSILFGATSVDFSVSGRLL-FAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW------- 284 (320)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~s~~~~~l-~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~------- 284 (320)
........ .+..++|+|+++.+ ++++.++.|.+||..+++.+..+. +...+.+++|+|+|++|++++.
T Consensus 296 ~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 296 IDTIGPPG---NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTE 371 (433)
T ss_dssp EEEEEEEE---CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred EeeccCCC---CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCcccc
Confidence 65543222 35678999999755 666899999999998887776554 7788999999999998888876
Q ss_pred --------CCceEeeecch
Q psy14961 285 --------DTTLRDEESKN 295 (320)
Q Consensus 285 --------D~~ir~~~~~~ 295 (320)
||.|++|+...
T Consensus 372 ~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp CTTSCCSSCCEEEEEETTT
T ss_pred ccccccccceEEEEEECCC
Confidence 57999999744
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=3.3e-28 Score=216.34 Aligned_cols=247 Identities=17% Similarity=0.160 Sum_probs=154.5
Q ss_pred EEEEE---cCCCCEEEEecCCCeEEEEEecccCCcccc---cc--cc--------------------cccccCeEEEEec
Q psy14961 23 MACAY---APSGSVVASGGLDNKVTVYAIALEDDSSAK---KK--TV--------------------ATHTSFISCCIFP 74 (320)
Q Consensus 23 ~~~~~---~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~---~~--~~--------------------~~h~~~v~~~~~~ 74 (320)
.++.| +|++..+++++.++.|.+|+...+...... .. .. ..|...+....++
T Consensus 19 ~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (393)
T 4gq1_A 19 YTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSP 98 (393)
T ss_dssp EEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------CC
T ss_pred eEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeecC
Confidence 45555 445555566666888999987532211100 00 00 1122222233344
Q ss_pred CCCCEEEEEeCCCeEEEEECCCcce-----eeecccCccceeEEEEeeC------CCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961 75 NSDQQILTGSGDCTCALWDVESSQL-----LQSFHGHTGELMDLDLAPS------ETGNTFVSGSSDKLVNIWDMRTGYC 143 (320)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~~------~~~~~l~s~~~dg~i~lwd~~~~~~ 143 (320)
+++..+++++.|++|++||++++.. +..+.+|.+.|.+++|.|. .++++|++++.|++|++||++++..
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 4556799999999999999987653 3457899999999999862 2678999999999999999866543
Q ss_pred EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC-EEEEeeCCCeEEEEECCCCeeEeEEecC---
Q psy14961 144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVACYKKD--- 219 (320)
Q Consensus 144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~--- 219 (320)
+ ..+.+|..+|.+++|+|++. +|++++.|++|++||+++++........
T Consensus 179 ~---------------------------~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 179 I---------------------------LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp E---------------------------EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred e---------------------------eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 2 33345778899999999875 7999999999999999876543221100
Q ss_pred --------------------cceeeeEEEEEe-cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECc----
Q psy14961 220 --------------------SILFGATSVDFS-VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP---- 274 (320)
Q Consensus 220 --------------------~~~~~~~~~~~s-~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~---- 274 (320)
.....+..+.|+ |+++.|++++.|+++++||+........+..|...+..+.+.|
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 311 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQG 311 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEE
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccc
Confidence 000123456776 8999999999999999999887666655655555554444433
Q ss_pred ----------------CCCeEEEecCCCceEeeecchH
Q psy14961 275 ----------------DGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 275 ----------------~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
++.++++|+.|++|++|+....
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~ 349 (393)
T 4gq1_A 312 ISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK 349 (393)
T ss_dssp ECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT
T ss_pred ccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC
Confidence 3446788999999999997544
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=5.8e-27 Score=199.73 Aligned_cols=210 Identities=17% Similarity=0.125 Sum_probs=144.6
Q ss_pred ccceEEEEEcCC----CCEEEEecC--------------------CCeEEEEEecccCCcccccccccccccCeEEEEec
Q psy14961 19 ATWVMACAYAPS----GSVVASGGL--------------------DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP 74 (320)
Q Consensus 19 ~~~V~~~~~~~~----~~~l~s~~~--------------------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 74 (320)
-..|.+++|+|| ++.+++++. |+.|++|++... ......+..|...+..+.|+
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d---G~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED---GGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT---SCEEEEEEECCCSSCEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC---CceeeeeccCCCceeeEEee
Confidence 346778888888 777776553 788888887422 22334556788888888887
Q ss_pred C---CCCEEEEEeCCCeEEEEECCCcceeeecccCcc---ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961 75 N---SDQQILTGSGDCTCALWDVESSQLLQSFHGHTG---ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE 148 (320)
Q Consensus 75 ~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~ 148 (320)
+ ++..|++|+.|++|+|||+.+++++..+.+|.. .+.+++|+| +|.++++++.+.. +|++.++
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp--dG~~lvs~s~~~~--~w~laSG------- 256 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE--MGLLFIVLSHPCA--KESESLR------- 256 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE--TTEEEEEEC--------------------
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC--CCCEEEEeccCCC--cceeecc-------
Confidence 7 678999999999999999999999999876543 455556765 5778776665433 3555544
Q ss_pred cCCccccCCCeEEEEECcCCeeeeee-----cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCccee
Q psy14961 149 GHHNLITDDKLVNIWDMRTGYCVQSF-----EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILF 223 (320)
Q Consensus 149 ~~~~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 223 (320)
..|+++++||..+++++..+ .+|...+.+.+++ +..+++++.|++|+|||+.+++.+..+..+...
T Consensus 257 ------s~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~- 327 (356)
T 2w18_A 257 ------SPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQ- 327 (356)
T ss_dssp -------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--C-
T ss_pred ------CCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCC-
Confidence 24666677777766655443 3566555444444 788999999999999999999988777644321
Q ss_pred eeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961 224 GATSVDFSVSGRLLFAGYNDYTINVWDS 251 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~ 251 (320)
....++|+|||++|++|+.|++|++||.
T Consensus 328 vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 1245899999999999999999999984
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=7.5e-25 Score=193.94 Aligned_cols=254 Identities=14% Similarity=0.123 Sum_probs=191.0
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEE-ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVAS-GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ 79 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s-~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 79 (320)
|++||..+++....+..+ ..+.+++|+|++++|+. ++.++.|++||+... .....+. +...+.++.|+++++.
T Consensus 56 i~v~d~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~----~~~~~~~-~~~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN----TVAGTVK-TGKSPLGLALSPDGKK 129 (391)
T ss_dssp EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----EEEEEEE-CSSSEEEEEECTTSSE
T ss_pred EEEEECCCCeEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCC----eEEEEEe-CCCCcceEEECCCCCE
Confidence 479999998887766655 48999999999998754 556799999998532 2222233 3356789999999987
Q ss_pred E-EEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEE-EEEeCCCeEEEEeCCCCcEEEEeccCCccccCC
Q psy14961 80 I-LTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTF-VSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDD 157 (320)
Q Consensus 80 l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d 157 (320)
+ ++++.|+.|++||+.+++.+..+..+ ..+..+++ +++++.+ ++++.++.|++||+++++.+..+
T Consensus 130 l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~--~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~---------- 196 (391)
T 1l0q_A 130 LYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAV--TPDGTKVYVANFDSMSISVIDTVTNSVIDTV---------- 196 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEE----------
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEE--CCCCCEEEEEeCCCCEEEEEECCCCeEEEEE----------
Confidence 7 67778999999999999888777654 44566666 4567777 57788899999999876544332
Q ss_pred CeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCC
Q psy14961 158 KLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSG 234 (320)
Q Consensus 158 ~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 234 (320)
. +...+.+++|+|+|+++++++ .++.|++||+.+++.+..+..+. .+..++|+|++
T Consensus 197 -----------------~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg 255 (391)
T 1l0q_A 197 -----------------K-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP---DPAGIAVTPDG 255 (391)
T ss_dssp -----------------E-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS---SEEEEEECTTS
T ss_pred -----------------e-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC---CccEEEEccCC
Confidence 1 334678999999999998887 68999999999888776665543 24678999999
Q ss_pred cEE-EEEeCCCeEEEEcCCCCeEEEEeecCCCcee---EEEEC------------cCC----------CeEEEecCCCce
Q psy14961 235 RLL-FAGYNDYTINVWDSLKCCRVNHLMGHENRVS---CLQVS------------PDG----------TAFSSGSWDTTL 288 (320)
Q Consensus 235 ~~l-~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~---~i~~s------------~~~----------~~l~s~s~D~~i 288 (320)
++| ++++.++.|++||+.+++.+..+..|..+.. .+.+. .+. ..|.+.+.|.+.
T Consensus 256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (391)
T 1l0q_A 256 KKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATE 335 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceE
Confidence 977 5667899999999999888888776655421 12322 221 347777889999
Q ss_pred Eeeecc
Q psy14961 289 RDEESK 294 (320)
Q Consensus 289 r~~~~~ 294 (320)
++|+..
T Consensus 336 ~~W~~~ 341 (391)
T 1l0q_A 336 WKWDFG 341 (391)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 999963
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=4.4e-25 Score=203.81 Aligned_cols=288 Identities=14% Similarity=0.100 Sum_probs=209.6
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC----C
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN----S 76 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~ 76 (320)
|.+||..+++....+..+.. +..++|+|||++|++++.|+.|++||+... ......++. +......+.|++ +
T Consensus 161 V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~--t~~~~~~i~-~g~~p~~va~sp~~~~d 236 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAK--EPTKVAEIK-IGIEARSVESSKFKGYE 236 (543)
T ss_dssp EEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSS--SCEEEEEEE-CCSEEEEEEECCSTTCT
T ss_pred EEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCC--CCcEEEEEe-cCCCcceEEeCCCcCCC
Confidence 46899999988877764433 889999999999999999999999998311 122233343 344568899999 9
Q ss_pred CCEEEEEeC-CCeEEEEECCCcceeeecccC----------cc-ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961 77 DQQILTGSG-DCTCALWDVESSQLLQSFHGH----------TG-ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV 144 (320)
Q Consensus 77 ~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~----------~~-~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~ 144 (320)
++++++++. +++|.+||..+++++..+..+ .+ .+..+.+++. ...++++...++.|.+||+.+...+
T Consensus 237 g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~-~~~~~vs~~~~g~i~vvd~~~~~~l 315 (543)
T 1nir_A 237 DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE-HPEFIVNVKETGKVLLVNYKDIDNL 315 (543)
T ss_dssp TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS-SSEEEEEETTTTEEEEEECTTSSSC
T ss_pred CCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC-CCEEEEEECCCCeEEEEEecCCCcc
Confidence 999998884 899999999999888776542 22 4556665443 2346667788999999999775432
Q ss_pred E--Ee-----------ccCCc--cc--cCCCeEEEEECcCCeeeeeecC----CCCCeEEEEEcCC-CCEEEEee-CCCe
Q psy14961 145 Q--SF-----------EGHHN--LI--TDDKLVNIWDMRTGYCVQSFEG----HQSDVNSVKFHPS-GDAVATGS-DDAT 201 (320)
Q Consensus 145 ~--~~-----------~~~~~--~~--~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~v~~~p~-g~~l~s~s-~dg~ 201 (320)
. .+ ..... .+ ..++.|.+||..+++++..+.. |......+ ++|+ |..+++++ .|++
T Consensus 316 ~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~ 394 (543)
T 1nir_A 316 TVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS 394 (543)
T ss_dssp EEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred eeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce
Confidence 2 22 11111 11 2467899999999998887764 55444343 5787 55667765 6899
Q ss_pred EEEEECCC-------CeeEeEEecCcceeeeEEEEEecCCcEEEEEe-------CCCeEEEEcCCCCeEE-EEe------
Q psy14961 202 CRLFDLRA-------DKEVACYKKDSILFGATSVDFSVSGRLLFAGY-------NDYTINVWDSLKCCRV-NHL------ 260 (320)
Q Consensus 202 i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-------~dg~v~~wd~~~~~~~-~~~------ 260 (320)
|.+||..+ .+.+..++.+.. +...++|+|+|++|++++ .+++|.+||..+.+.. ..+
T Consensus 395 V~v~d~~~~~~~~~~~~~v~~l~~~g~--~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~ 472 (543)
T 1nir_A 395 ISLIGTDPKNHPQYAWKKVAELQGQGG--GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA 472 (543)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECSCS--CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHH
T ss_pred EEEEEeCCCCCchhcCeEEEEEEcCCC--CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhc
Confidence 99999987 566665554321 235688999999999987 2679999999877655 332
Q ss_pred --ecCCCceeEEEECcCCCeEEEec-----CCCceEeeecchH
Q psy14961 261 --MGHENRVSCLQVSPDGTAFSSGS-----WDTTLRDEESKNR 296 (320)
Q Consensus 261 --~~h~~~i~~i~~s~~~~~l~s~s-----~D~~ir~~~~~~~ 296 (320)
..|...+..++|+|||+.+..+. .|++|.+||.++.
T Consensus 473 ~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 473 DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp CCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred ccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 35677899999999999988663 4899999997554
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.3e-25 Score=201.01 Aligned_cols=255 Identities=11% Similarity=0.067 Sum_probs=189.5
Q ss_pred CeEeec--ccceeEE--EEEeCccceEEEEEcC--------------CCCEEEEecCC------CeEEEEEecccCCccc
Q psy14961 1 MIIWDG--LTQTKEH--SVTMPATWVMACAYAP--------------SGSVVASGGLD------NKVTVYAIALEDDSSA 56 (320)
Q Consensus 1 ~~~W~~--~~~~~~~--~~~~~~~~V~~~~~~~--------------~~~~l~s~~~d------g~i~v~~~~~~~~~~~ 56 (320)
++|||. .+++.+. .+..|...+..+++++ .+..++.++.+ +.|++||++. .
T Consensus 95 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-----~ 169 (415)
T 2hqs_A 95 YQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-----Y 169 (415)
T ss_dssp EEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-----C
T ss_pred EEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-----C
Confidence 479999 8887663 3667777777766664 25677776654 7999999852 2
Q ss_pred ccccccccccCeEEEEecCCCCEEEEEeCCC---eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCe
Q psy14961 57 KKKTVATHTSFISCCIFPNSDQQILTGSGDC---TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKL 132 (320)
Q Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~ 132 (320)
....+..|...+.++.|+|+++.|++++.++ .|++||+.+++.. .+..|...+.+++| +|+|+.|+ +++.++.
T Consensus 170 ~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~--spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAF--SPDGSKLAFALSKTGS 246 (415)
T ss_dssp SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEE--CTTSSEEEEEECTTSS
T ss_pred CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEE--cCCCCEEEEEEecCCC
Confidence 2345667888999999999999999999875 9999999988765 45567777877777 45788777 6666554
Q ss_pred --EEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC--eEEEEEC
Q psy14961 133 --VNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA--TCRLFDL 207 (320)
Q Consensus 133 --i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg--~i~iwd~ 207 (320)
|++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|.+||+
T Consensus 247 ~~i~~~d~~~~~~----------------------------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 247 LNLYVMDLASGQI----------------------------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CEEEEEETTTCCE----------------------------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred ceEEEEECCCCCE----------------------------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 77777765432 223456678899999999999988876 45 6788898
Q ss_pred CCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC---CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecC
Q psy14961 208 RADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND---YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d---g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~ 284 (320)
.+++... ..... ..+..++|+|+|++|++++.+ +.|.+||..++.. ..+..|. .+.+++|+|||++|++++.
T Consensus 299 ~~~~~~~-l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 299 NGGAPQR-ITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp TSSCCEE-CCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred CCCCEEE-EecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 8765432 22221 134678999999999988754 5899999887655 3455554 8999999999999999998
Q ss_pred CC---ceEeeecchH
Q psy14961 285 DT---TLRDEESKNR 296 (320)
Q Consensus 285 D~---~ir~~~~~~~ 296 (320)
|+ .|++|+....
T Consensus 374 ~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 374 QGMGSVLNLVSTDGR 388 (415)
T ss_dssp ETTEEEEEEEETTSC
T ss_pred CCCccEEEEEECCCC
Confidence 87 7999986543
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=3.2e-24 Score=198.08 Aligned_cols=261 Identities=11% Similarity=0.040 Sum_probs=197.9
Q ss_pred EEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEEC--CCcceeeec
Q psy14961 26 AYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDV--ESSQLLQSF 103 (320)
Q Consensus 26 ~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~--~~~~~~~~~ 103 (320)
+|+|++.++++++.|++|.+||.... .....+..+.. +.++.|+++++++++++.|++|++||+ .+++.+..+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~----~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSK----KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTC----CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCc----eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE
Confidence 38999999999999999999987532 22334442222 778999999999999999999999999 788888777
Q ss_pred ccCccceeEEEEeeCC----CCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCC----------c------cc--------
Q psy14961 104 HGHTGELMDLDLAPSE----TGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHH----------N------LI-------- 154 (320)
Q Consensus 104 ~~~~~~v~~~~~~~~~----~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~----------~------~~-------- 154 (320)
.. ......+++ ++ +|+++++++ .++.|.+||..+++++..+..+. . ..
T Consensus 219 ~~-g~~p~~va~--sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 219 KI-GIEARSVES--SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EC-CSEEEEEEE--CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred ec-CCCcceEEe--CCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 73 445666766 55 789999888 48999999999988877664311 1 00
Q ss_pred ---cCCCeEEEEECcCCeeee--eecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcc-ee-eeE
Q psy14961 155 ---TDDKLVNIWDMRTGYCVQ--SFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSI-LF-GAT 226 (320)
Q Consensus 155 ---~~d~~i~iwd~~~~~~~~--~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~-~~-~~~ 226 (320)
..++.|.+||..+.+.+. .+. +...+..++|+|+|++|+++ ..+++|.+||+.+++.+..+..... .. ...
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred EEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 246789999998765433 333 55567889999999987655 5689999999999987766553211 11 111
Q ss_pred EEEEecC-CcEEEEEe-CCCeEEEEcCCC-------CeEEEEeecCCCceeEEEECcCCCeEEEec-------CCCceEe
Q psy14961 227 SVDFSVS-GRLLFAGY-NDYTINVWDSLK-------CCRVNHLMGHENRVSCLQVSPDGTAFSSGS-------WDTTLRD 290 (320)
Q Consensus 227 ~~~~s~~-~~~l~~g~-~dg~v~~wd~~~-------~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s-------~D~~ir~ 290 (320)
. .++|+ +..++++. .+++|.+||+.+ .+.+.++.+|...+..|+|+|||++|++++ .+++|++
T Consensus 375 ~-~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v 453 (543)
T 1nir_A 375 N-FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAV 453 (543)
T ss_dssp E-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEE
T ss_pred c-cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEE
Confidence 2 25787 66667765 589999999887 788899999999999999999999999997 3789999
Q ss_pred eecchH
Q psy14961 291 EESKNR 296 (320)
Q Consensus 291 ~~~~~~ 296 (320)
||..+.
T Consensus 454 ~d~~~~ 459 (543)
T 1nir_A 454 FDLKNL 459 (543)
T ss_dssp EETTCT
T ss_pred EECCCC
Confidence 997543
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.1e-23 Score=188.38 Aligned_cols=235 Identities=13% Similarity=0.079 Sum_probs=176.9
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCC---eEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDN---KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD 77 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg---~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 77 (320)
|++||.... ....+..|...|.+++|+|+|++|++++.++ .|++||+.... ...+..|...+.++.|+|++
T Consensus 161 i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-----~~~l~~~~~~~~~~~~spdg 234 (415)
T 2hqs_A 161 LRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-----VRQVASFPRHNGAPAFSPDG 234 (415)
T ss_dssp EEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEEEECCSSCEEEEEECTTS
T ss_pred EEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc-----EEEeecCCCcccCEEEcCCC
Confidence 468998743 3445666778999999999999999999875 99999985321 12455677889999999999
Q ss_pred CEEE-EEeCCCe--EEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC--eEEEEeCCCCcEEEEeccCC
Q psy14961 78 QQIL-TGSGDCT--CALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK--LVNIWDMRTGYCVQSFEGHH 151 (320)
Q Consensus 78 ~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg--~i~lwd~~~~~~~~~~~~~~ 151 (320)
+.|+ +++.|+. |++||+.+++. ..+..|...+..++| +|+|+.|++++. ++ .|.+||+.+++.
T Consensus 235 ~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~--spdg~~l~~~s~~~g~~~i~~~d~~~~~~-------- 303 (415)
T 2hqs_A 235 SKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTW--FPDSQNLAFTSDQAGRPQVYKVNINGGAP-------- 303 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEE--CTTSSEEEEEECTTSSCEEEEEETTSSCC--------
T ss_pred CEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEE--CCCCCEEEEEECCCCCcEEEEEECCCCCE--------
Confidence 9877 6666654 99999988775 456667777877777 557888888776 34 566667655431
Q ss_pred ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC---CeEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961 152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD---ATCRLFDLRADKEVACYKKDSILFGATSV 228 (320)
Q Consensus 152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 228 (320)
..+..+...+.+++|+|+|++|++++.+ ..|.+||+.+++... ..... .+..+
T Consensus 304 --------------------~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~---~~~~~ 359 (415)
T 2hqs_A 304 --------------------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTF---LDETP 359 (415)
T ss_dssp --------------------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSS---SCEEE
T ss_pred --------------------EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCC---CcCCe
Confidence 1122355578899999999999888764 589999999876543 22221 45788
Q ss_pred EEecCCcEEEEEeCCC---eEEEEcCCCCeEEEEeecCCCceeEEEECcCCC
Q psy14961 229 DFSVSGRLLFAGYNDY---TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT 277 (320)
Q Consensus 229 ~~s~~~~~l~~g~~dg---~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~ 277 (320)
+|+|+|++|++++.++ .|.+||+. +.....+.+|.+.|.+++|+|...
T Consensus 360 ~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 360 SLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 9999999999988766 79999976 445667889999999999999654
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.1e-22 Score=176.14 Aligned_cols=267 Identities=13% Similarity=0.098 Sum_probs=177.2
Q ss_pred CeEeecc-cce-eEEEEEeCccceEEEEEcCCCCEEEEecCC-CeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961 1 MIIWDGL-TQT-KEHSVTMPATWVMACAYAPSGSVVASGGLD-NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD 77 (320)
Q Consensus 1 ~~~W~~~-~~~-~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d-g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 77 (320)
|.+||.. +++ .......+...+..++|+|+|++|++++.+ +.|.+|+++...........+..+. .+..+.|++++
T Consensus 17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg 95 (343)
T 1ri6_A 17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQG 95 (343)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTS
T ss_pred EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCC
Confidence 4689884 232 122223355678899999999998888876 9999999863222222222333333 67889999999
Q ss_pred CEEEEEeC-CCeEEEEEC---CCcceeeecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCC-CcEEEEeccCC
Q psy14961 78 QQILTGSG-DCTCALWDV---ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRT-GYCVQSFEGHH 151 (320)
Q Consensus 78 ~~l~s~~~-dg~v~iwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~-~~~~~~~~~~~ 151 (320)
+.+++++. ++.|.+||+ .+...+..+..+ ..+.++++ +++++.+++++ .++.|.+||+.+ +........
T Consensus 96 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-- 170 (343)
T 1ri6_A 96 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI--SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA-- 170 (343)
T ss_dssp SEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEE--CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--
T ss_pred CEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEE--CCCCCEEEEecCCCCEEEEEEecCCCceeeeccc--
Confidence 98877765 889999999 334444444433 34666666 45688888776 889999999876 432111000
Q ss_pred ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCC--Cee--EeEEecCcc----e
Q psy14961 152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRA--DKE--VACYKKDSI----L 222 (320)
Q Consensus 152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~--~~~--~~~~~~~~~----~ 222 (320)
.+ .......+..++|+|+|++++++ ..++.+.+||++. ++. ......... .
T Consensus 171 ----------~~----------~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 171 ----------EV----------TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp ----------EE----------ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred ----------cc----------ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 00 01122357789999999977554 4789999999954 322 112211111 1
Q ss_pred eeeEEEEEecCCcEEEEEe-CCCeEEEEcCC----CCeEEEEeecCCCceeEEEECcCCCeEEEec-CCCceEeeecc
Q psy14961 223 FGATSVDFSVSGRLLFAGY-NDYTINVWDSL----KCCRVNHLMGHENRVSCLQVSPDGTAFSSGS-WDTTLRDEESK 294 (320)
Q Consensus 223 ~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~----~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s-~D~~ir~~~~~ 294 (320)
..+..++|+|+|++|+++. .++.|.+||.. ....+..+..+.. +.+++|+|+|++|++++ .|+.+++|+..
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 2345789999999887554 78999999987 3344555555544 89999999999877777 68999999653
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=8.2e-24 Score=179.08 Aligned_cols=248 Identities=15% Similarity=0.149 Sum_probs=175.2
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecc-cCCccccccccccc-ccCeEEEEecCCCC
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIAL-EDDSSAKKKTVATH-TSFISCCIFPNSDQ 78 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~-~~~~~~~~~~~~~h-~~~v~~~~~~~~~~ 78 (320)
|++||..+++.. .+..+...|.+++|+|+|++|++++ ++.|.+||+.. .. .......+ ...+.++.|+++++
T Consensus 24 i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 24 IEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS----PEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp EEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS----CEECCCTTCCCBCSCCEECTTSS
T ss_pred EEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC----ceEeccccccccccceEECCCCC
Confidence 468999887765 3445678899999999999999986 78999999854 22 11222233 36778899999999
Q ss_pred EEEEEe--CCCeEEEE--ECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961 79 QILTGS--GDCTCALW--DVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNL 153 (320)
Q Consensus 79 ~l~s~~--~dg~v~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~ 153 (320)
.+++++ .++..+|| ++.++.. ..+..+ ..+..+++ +++++.|+ +++.++.+++|++...
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~--spdg~~l~~~~~~~~~~~l~~~~~~------------ 161 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGW--SPDGKSFTYCGIRDQVFDIYSMDID------------ 161 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEE--CTTSSEEEEEEEETTEEEEEEEETT------------
T ss_pred EEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEE--CCCCCEEEEEECCCCceEEEEEECC------------
Confidence 999988 33455555 4454443 333333 33666666 55688777 7778888888875321
Q ss_pred ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECC-CCeeEeEEecCcceeeeEEEEEe
Q psy14961 154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLR-ADKEVACYKKDSILFGATSVDFS 231 (320)
Q Consensus 154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~s 231 (320)
++ ....+..|...+.+++|+|+|+.++.++ .++.+++|+++ .+.....+..+. ..+..+.|+
T Consensus 162 -------------~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~s 225 (297)
T 2ojh_A 162 -------------SG-VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA--YGDWFPHPS 225 (297)
T ss_dssp -------------TC-CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS--EEEEEEEEC
T ss_pred -------------CC-cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC--cccCCeEEC
Confidence 01 1122334667889999999999887665 58999999876 333333333222 245678999
Q ss_pred cCCcEEEEEeCC-----------CeEEEEcCCCCeE--EEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961 232 VSGRLLFAGYND-----------YTINVWDSLKCCR--VNHLMGHENRVSCLQVSPDGTAFSSGSWDT 286 (320)
Q Consensus 232 ~~~~~l~~g~~d-----------g~v~~wd~~~~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~ 286 (320)
|+|++|++++.+ +.|.+||+.++.. +..+.+|...+.+++|+||++.|++++.|.
T Consensus 226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 999999888765 5699999876543 455568889999999999999999888764
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=3.9e-22 Score=172.46 Aligned_cols=265 Identities=11% Similarity=0.087 Sum_probs=182.9
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ 79 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 79 (320)
|.+||..+++.......+...+ .++|+|+|++|++++. ++.|.+||+..... ....+..+..+..++.|++++++
T Consensus 22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~ 97 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP---KVVAIQEGQSSMADVDITPDDQF 97 (331)
T ss_dssp EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC---EEEEEEECSSCCCCEEECTTSSE
T ss_pred EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce---eEEecccCCCCccceEECCCCCE
Confidence 4689999888877666666666 9999999997766655 88999999853221 12334455555555889999999
Q ss_pred EEEEeCCC---eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCe-EEEEeCCCCcEEEEeccCCccc
Q psy14961 80 ILTGSGDC---TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKL-VNIWDMRTGYCVQSFEGHHNLI 154 (320)
Q Consensus 80 l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~-i~lwd~~~~~~~~~~~~~~~~~ 154 (320)
++++..++ .|.+||+.+++.+..+..+ .....+++ +++|+.++ +...++. |.+|++.....+..
T Consensus 98 l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~--spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~-------- 166 (331)
T 3u4y_A 98 AVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAI--SPNGNGLILIDRSSANTVRRFKIDADGVLFD-------- 166 (331)
T ss_dssp EEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEE--CTTSSCEEEEEETTTTEEEEEEECTTCCEEE--------
T ss_pred EEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEE--CCCCCEEEEEecCCCceEEEEEECCCCcEee--------
Confidence 98655553 8999999998887776543 34466666 55677555 4455577 99999864321111
Q ss_pred cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCee---EeEEecCcceeeeEEEEE
Q psy14961 155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKE---VACYKKDSILFGATSVDF 230 (320)
Q Consensus 155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~ 230 (320)
.. ...+ ........++|+|+|++++ ++..++.|.+||+.+++. +..+... ..+..++|
T Consensus 167 ----------~~----~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~~ 228 (331)
T 3u4y_A 167 ----------TG----QEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIVV 228 (331)
T ss_dssp ----------EE----EEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEEE
T ss_pred ----------cC----Cccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEEE
Confidence 00 0111 2234578999999999664 555789999999988776 5444433 23467889
Q ss_pred ecCCcEEEEEe-CCCeEEEEcCCCCeE--EEEeecC----CC---ceeEEEECcCCCeEEE-ecCCCceEeeecchHhh
Q psy14961 231 SVSGRLLFAGY-NDYTINVWDSLKCCR--VNHLMGH----EN---RVSCLQVSPDGTAFSS-GSWDTTLRDEESKNRYV 298 (320)
Q Consensus 231 s~~~~~l~~g~-~dg~v~~wd~~~~~~--~~~~~~h----~~---~i~~i~~s~~~~~l~s-~s~D~~ir~~~~~~~~~ 298 (320)
+|+|++|+++. .++.|.+||..+++. +..+..+ .. ....++|+|||++|+. +..+++|++|+...+..
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 99999776665 577899999887765 3333322 22 2356999999998755 45567999999866544
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=3.9e-21 Score=167.33 Aligned_cols=252 Identities=10% Similarity=0.062 Sum_probs=184.6
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCccccccccccccc---------CeEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTS---------FISC 70 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---------~v~~ 70 (320)
|.+||..+++....+... ..+.+++|+|+|++++ +...++.|.+||..... ....+..+.. ...+
T Consensus 71 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE----VKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp EEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC----EEEEEESCCCCCCSSCCCCEEEE
T ss_pred EEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe----eEEEEecCCCccccccCCCCCce
Confidence 468999888877666654 4467899999999554 55667999999975321 1122222211 2577
Q ss_pred EEecCCCCEEEEEe--CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec
Q psy14961 71 CIFPNSDQQILTGS--GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE 148 (320)
Q Consensus 71 ~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~ 148 (320)
+.|+++++.+++++ .++.|.+||+.+++.+..+..+...+..+.+. ++|+.+++++.++.|.+||+.+++.+..+.
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s--~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALD--SEGKRLYTTNADGELITIDTADNKILSRKK 223 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEE--TTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEEC--CCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence 89999999887776 47899999999998887776455556667765 468899999999999999998876554432
Q ss_pred cCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeEeEEecCcceeeeEE
Q psy14961 149 GHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEVACYKKDSILFGATS 227 (320)
Q Consensus 149 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 227 (320)
.. ..++...+.+++|+|+|++++.++ .++.|.+||+.+++.+..+.... ...
T Consensus 224 ~~-----------------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~ 276 (353)
T 3vgz_A 224 LL-----------------------DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE----SLA 276 (353)
T ss_dssp CC-----------------------CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS----CCC
T ss_pred cC-----------------------CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC----Cce
Confidence 10 012444678899999999776655 45999999999888766555432 245
Q ss_pred EEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCc
Q psy14961 228 VDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT 287 (320)
Q Consensus 228 ~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ 287 (320)
++|+|+|++++++. .++.|.+||..+++.+..+.. ...+.+++|+|||++|+.+..++.
T Consensus 277 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEEECCC
T ss_pred EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEEcccc
Confidence 88999999766655 689999999988887776654 346899999999997777766543
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=3e-21 Score=168.17 Aligned_cols=261 Identities=11% Similarity=0.103 Sum_probs=170.6
Q ss_pred EeecccceeEE-EEEeCccceEEEEEcCCCCEEEEecC---CCeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961 3 IWDGLTQTKEH-SVTMPATWVMACAYAPSGSVVASGGL---DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ 78 (320)
Q Consensus 3 ~W~~~~~~~~~-~~~~~~~~V~~~~~~~~~~~l~s~~~---dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 78 (320)
.||..+++... ....+......++|+|+|+ |++++. ++.|.+|++... .......+..+...+..+.|+++++
T Consensus 22 ~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g--~~~~~~~~~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 22 TLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ--TAHKLNTVVAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp EEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT--EEEEEEEEEEESCCCSEEEEETTTT
T ss_pred EEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC--cEEEeeeeecCCCCCEEEEECCCCC
Confidence 34555555332 2223345567899999999 555544 689999998432 2222333344666778899999999
Q ss_pred EEEEEe-CCCeEEEEECCC-cc--eeeecccC---------ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-CCcEE
Q psy14961 79 QILTGS-GDCTCALWDVES-SQ--LLQSFHGH---------TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-TGYCV 144 (320)
Q Consensus 79 ~l~s~~-~dg~v~iwd~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-~~~~~ 144 (320)
.|++++ .++.|.+|++.. +. .+..+... ...+.++++ +++|+.+++...++.|.+||+. ++...
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--spdg~l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL--TPDNRLAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE--CTTSCEEEEETTTTEEEEEEECTTSCEE
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE--CCCCcEEEEeCCCCEEEEEEECCCCcEE
Confidence 888888 689999999853 22 22222211 113555666 5568866666778899999987 33321
Q ss_pred EEeccCCccccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEE-eeCCCeEEEEECCC--CeeEe--EEec
Q psy14961 145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVAT-GSDDATCRLFDLRA--DKEVA--CYKK 218 (320)
Q Consensus 145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s-~s~dg~i~iwd~~~--~~~~~--~~~~ 218 (320)
.. ..+.. ....+..++|+|+|+++++ ...++.+.+|+++. ++... ....
T Consensus 177 ~~-------------------------~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 231 (347)
T 3hfq_A 177 EQ-------------------------SVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT 231 (347)
T ss_dssp EE-------------------------EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred Ee-------------------------eeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee
Confidence 10 00111 1224678999999996655 56788999999874 43221 1111
Q ss_pred Ccc----eeeeEEEEEecCCcEEE-EEeCCCeEEEEcCC---CCeEEEEeecCCCceeEEEECcCCCeEEEecC-CCceE
Q psy14961 219 DSI----LFGATSVDFSVSGRLLF-AGYNDYTINVWDSL---KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSW-DTTLR 289 (320)
Q Consensus 219 ~~~----~~~~~~~~~s~~~~~l~-~g~~dg~v~~wd~~---~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~-D~~ir 289 (320)
... ...+..++|+|+|++|+ ++..++.|.+||+. ....+..+..|...+.+++|+|||++|++++. ++.++
T Consensus 232 ~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 232 IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 111 02356799999999875 45568999999976 33455666677777899999999998888775 48999
Q ss_pred eeec
Q psy14961 290 DEES 293 (320)
Q Consensus 290 ~~~~ 293 (320)
+|+.
T Consensus 312 v~~~ 315 (347)
T 3hfq_A 312 LYAR 315 (347)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=4.2e-22 Score=190.73 Aligned_cols=266 Identities=14% Similarity=0.074 Sum_probs=189.2
Q ss_pred ccceEEEEEcCCCCEEEEecC-CC-----eEEEEEecccCCcccccccccccc------------------------cCe
Q psy14961 19 ATWVMACAYAPSGSVVASGGL-DN-----KVTVYAIALEDDSSAKKKTVATHT------------------------SFI 68 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~-dg-----~i~v~~~~~~~~~~~~~~~~~~h~------------------------~~v 68 (320)
...|.+++|+|||++|++++. |+ .|++||+..... ...+..+. ..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQT----RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCE----EEEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCce----eEccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 456889999999999999988 88 899999853221 11111221 236
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCcc--eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961 69 SCCIFPNSDQQILTGSGDCTCALWDVESSQ--LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS 146 (320)
Q Consensus 69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~ 146 (320)
.++.|++++++|++++. +.|++||+.++. ....+..+...+..++| +|+|+.|+.++. +.|++||+.++.....
T Consensus 112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~--SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKL--SPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp CCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEE--CTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred ceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccC--CCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 78899999999999886 999999998872 34456667777877777 557999998874 6899999988765432
Q ss_pred eccCC----------------------------ccc---cCCC---------------------------------eEEE
Q psy14961 147 FEGHH----------------------------NLI---TDDK---------------------------------LVNI 162 (320)
Q Consensus 147 ~~~~~----------------------------~~~---~~d~---------------------------------~i~i 162 (320)
...+. ..+ ..++ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 22111 000 1121 6778
Q ss_pred EECcC-Ceeeeeec--CCCCCeEEEEEcCCCCEEEEeeC-----CCeEEEEECCCCeeEeEEecCccee--eeEEEEEec
Q psy14961 163 WDMRT-GYCVQSFE--GHQSDVNSVKFHPSGDAVATGSD-----DATCRLFDLRADKEVACYKKDSILF--GATSVDFSV 232 (320)
Q Consensus 163 wd~~~-~~~~~~~~--~~~~~v~~v~~~p~g~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~s~ 232 (320)
||+.+ ++...... .|...+.+++| |+|++|+.++. +..|.+||+.+++............ ....++|+|
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 89887 76544332 47778999999 99999986653 5689999999887655443322110 224678999
Q ss_pred CCcEEEEEeCCCeEEEEcCC-CCeEEEEeecCCCceeEE-EECcCCCeEE-EecCCC--ceEeeecc
Q psy14961 233 SGRLLFAGYNDYTINVWDSL-KCCRVNHLMGHENRVSCL-QVSPDGTAFS-SGSWDT--TLRDEESK 294 (320)
Q Consensus 233 ~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h~~~i~~i-~~s~~~~~l~-s~s~D~--~ir~~~~~ 294 (320)
||+++++++.+|.++||... .+. ...+..|...|..+ +|+|||+.|+ +++.|+ ++++|+..
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 99999999999987887543 233 66777888888887 5999998764 555555 89999853
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=1.5e-22 Score=193.15 Aligned_cols=287 Identities=11% Similarity=0.033 Sum_probs=189.1
Q ss_pred CeEeecccceeEEEEEeCcc---ceEEEEEcCCCCEEEEecCC---------CeEEEEEecccCCcccccccccccccCe
Q psy14961 1 MIIWDGLTQTKEHSVTMPAT---WVMACAYAPSGSVVASGGLD---------NKVTVYAIALEDDSSAKKKTVATHTSFI 68 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~---~V~~~~~~~~~~~l~s~~~d---------g~i~v~~~~~~~~~~~~~~~~~~h~~~v 68 (320)
|++||..+++....+..+.. .|.+++|||||++|++++.+ +.+.+||+..... ........|...+
T Consensus 39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKL 116 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCC
T ss_pred EEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccc
Confidence 46899998877654444433 48999999999999998764 7788999864321 1222233455557
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccce------------------eEEEEeeCCCCCEEEEEeCC
Q psy14961 69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGEL------------------MDLDLAPSETGNTFVSGSSD 130 (320)
Q Consensus 69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~~l~s~~~d 130 (320)
..+.|+|+++.|+.++. +.|++||+.+++.......+...+ ..+.| +|+|+.|++++.|
T Consensus 117 ~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~--SpDg~~la~~~~~ 193 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWW--SPDGTRLAYAAIN 193 (723)
T ss_dssp SBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEE--CTTSSEEEEEEEE
T ss_pred cccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEE--CCCCCEEEEEEEC
Confidence 88999999999999885 799999999887665544433333 45555 6679999888755
Q ss_pred -CeEEEEeCCCCc-----EEEE--eccCCccccCCCeEEEEECcCCeeeeeecCC------CCCeEEEEEcCCCCEEEEe
Q psy14961 131 -KLVNIWDMRTGY-----CVQS--FEGHHNLITDDKLVNIWDMRTGYCVQSFEGH------QSDVNSVKFHPSGDAVATG 196 (320)
Q Consensus 131 -g~i~lwd~~~~~-----~~~~--~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~v~~~p~g~~l~s~ 196 (320)
+.+++|++.... .+.. +... .....+..+++||+.++++...+..+ ...+.+++|+|||+.+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 194 DSRVPIMELPTYTGSIYPTVKPYHYPKA-GSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp CTTSCEEEECCCSSSSSCCCEEEECCBT-TSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred CCccceEEeeccCCcCCCcceeccCCCC-CCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence 457777753211 0011 1100 00122347999999988765555544 5678999999999988766
Q ss_pred eC----CCeEEEEECCCCeeEeEEecC-cceee--eEEEEEecCCcEEEE--EeCCC------eEEEEc-CCCCe--EEE
Q psy14961 197 SD----DATCRLFDLRADKEVACYKKD-SILFG--ATSVDFSVSGRLLFA--GYNDY------TINVWD-SLKCC--RVN 258 (320)
Q Consensus 197 s~----dg~i~iwd~~~~~~~~~~~~~-~~~~~--~~~~~~s~~~~~l~~--g~~dg------~v~~wd-~~~~~--~~~ 258 (320)
+. +..|.+||+.+++........ ..... ...++|+|||+.|+. +..++ .|.+|| ...+. ...
T Consensus 273 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (723)
T 1xfd_A 273 LNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ 352 (723)
T ss_dssp EETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC
T ss_pred EcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee
Confidence 43 357999999888755443221 11111 136789999997765 44566 566777 33333 134
Q ss_pred EeecCCCceeE-EEECcCCCeEEEecCC---CceEeeec
Q psy14961 259 HLMGHENRVSC-LQVSPDGTAFSSGSWD---TTLRDEES 293 (320)
Q Consensus 259 ~~~~h~~~i~~-i~~s~~~~~l~s~s~D---~~ir~~~~ 293 (320)
.+..+...+.. ++|+|||+.|+..+.+ +++++|+.
T Consensus 353 ~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 353 SITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp BSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred EeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 44444444544 7999999998766554 78999985
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=9.3e-22 Score=188.30 Aligned_cols=283 Identities=8% Similarity=0.030 Sum_probs=192.1
Q ss_pred CeEeecccceeEEEEEeCc------------------------cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccc
Q psy14961 1 MIIWDGLTQTKEHSVTMPA------------------------TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSA 56 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~------------------------~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~ 56 (320)
|.+||..+++....+..+. ..|.+++|+|||++|++++. +.|.+||+..... .
T Consensus 66 i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~--~ 142 (741)
T 2ecf_A 66 LWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK--A 142 (741)
T ss_dssp EEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCST--T
T ss_pred EEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCc--c
Confidence 4689988877554333222 23788999999999999886 9999999853210 0
Q ss_pred ccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc----------------eeEEEEeeCCC
Q psy14961 57 KKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE----------------LMDLDLAPSET 120 (320)
Q Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~ 120 (320)
....+..|...+.++.|+++++.|++++ ++.|++||+.+++.......+... +..+.| +||
T Consensus 143 ~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~--SpD 219 (741)
T 2ecf_A 143 AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWW--APD 219 (741)
T ss_dssp SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEE--CTT
T ss_pred eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEE--CCC
Confidence 2234566778899999999999999887 569999999887765544333322 244555 567
Q ss_pred CCEEEEEeCCC---------------------------------eEEEEeCCC-CcEEEEecc-------------CCc-
Q psy14961 121 GNTFVSGSSDK---------------------------------LVNIWDMRT-GYCVQSFEG-------------HHN- 152 (320)
Q Consensus 121 ~~~l~s~~~dg---------------------------------~i~lwd~~~-~~~~~~~~~-------------~~~- 152 (320)
|+.|++++.|+ .|.+||+.+ ++......+ ...
T Consensus 220 g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~ 299 (741)
T 2ecf_A 220 DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQH 299 (741)
T ss_dssp SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTE
T ss_pred CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCE
Confidence 89999887765 788999988 654332211 111
Q ss_pred cc-------cCCCeEEEEECcCCeeeeeecCCCC----CeEEEEEcCCCCEEEEeeCCCeEEEEECCC-CeeEeEEecCc
Q psy14961 153 LI-------TDDKLVNIWDMRTGYCVQSFEGHQS----DVNSVKFHPSGDAVATGSDDATCRLFDLRA-DKEVACYKKDS 220 (320)
Q Consensus 153 ~~-------~~d~~i~iwd~~~~~~~~~~~~~~~----~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~~ 220 (320)
++ ..+..|.+||+.++++...+..+.. .+.+++|+|+|+++++++.||.++||.++. ++ ...+..+.
T Consensus 300 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~ 378 (741)
T 2ecf_A 300 LSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGN 378 (741)
T ss_dssp EEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSS
T ss_pred EEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecc
Confidence 11 1246789999999887766655443 456899999999889999999888887652 33 33332221
Q ss_pred ceeeeEEE-EEecCCcEEEE-EeCCC--eEEEEcCCC-CeEEEEeecCCCceeEEEECcCCCeEEEecCC----CceEee
Q psy14961 221 ILFGATSV-DFSVSGRLLFA-GYNDY--TINVWDSLK-CCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD----TTLRDE 291 (320)
Q Consensus 221 ~~~~~~~~-~~s~~~~~l~~-g~~dg--~v~~wd~~~-~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D----~~ir~~ 291 (320)
..+..+ .|+|+|+.|+. ++.++ .+++|+... +.....+.. ...+..++|||||++|+....+ ..+.++
T Consensus 379 --~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~ 455 (741)
T 2ecf_A 379 --WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELF 455 (741)
T ss_dssp --SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred --eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEE
Confidence 223455 59999987755 44455 899998643 333344444 6678899999999988766443 345566
Q ss_pred ec
Q psy14961 292 ES 293 (320)
Q Consensus 292 ~~ 293 (320)
+.
T Consensus 456 ~~ 457 (741)
T 2ecf_A 456 RA 457 (741)
T ss_dssp ET
T ss_pred Ec
Confidence 53
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=4.4e-21 Score=190.32 Aligned_cols=278 Identities=14% Similarity=0.135 Sum_probs=202.5
Q ss_pred EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEE
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILT 82 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 82 (320)
||....+.....+..|...+.++.|+++ .++++++.++.+.+|.++.... ....+..|. .+.+..|+++++.++.
T Consensus 187 lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~---~~~~l~~~~-~~~~~~~SpDG~~la~ 261 (1045)
T 1k32_A 187 IWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGK---DLRKHTSFT-DYYPRHLNTDGRRILF 261 (1045)
T ss_dssp EEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSC---SCEECCCCC-SSCEEEEEESSSCEEE
T ss_pred EEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCC---cceEecCCC-CcceeeEcCCCCEEEE
Confidence 4543322333445667888999999998 6777888899999998764322 122344444 3566788999998888
Q ss_pred EeCCCeEEEEECCCcceeeeccc-----------CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961 83 GSGDCTCALWDVESSQLLQSFHG-----------HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH 151 (320)
Q Consensus 83 ~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~ 151 (320)
+. ++.|.+|++..... ..+.. |...+..++|+| |+|+.|++++ ++.+.+|++..+.... +..+.
T Consensus 262 ~~-~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~-pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~ 336 (1045)
T 1k32_A 262 SK-GGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSP-LDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPL 336 (1045)
T ss_dssp EE-TTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEE-CGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCS
T ss_pred Ee-CCEEEEecCCceEe-eeeccCcccccccccccccccceeeecC-CCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCC
Confidence 74 89999999855443 34443 234577777751 4688888887 7899999998776432 22222
Q ss_pred c---------------cccCCCeEE-EEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961 152 N---------------LITDDKLVN-IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC 215 (320)
Q Consensus 152 ~---------------~~~~d~~i~-iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~ 215 (320)
. ....+..+. +||+..+.... +.+|...+.+++|+|+|++|++++.++.+++||+.+++....
T Consensus 337 ~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~ 415 (1045)
T 1k32_A 337 RIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI 415 (1045)
T ss_dssp CEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred cceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe
Confidence 1 012244566 78887765543 347888999999999999999999999999999998876655
Q ss_pred EecCcceeeeEEEEEecCCcEEEEEeCCC----------eEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961 216 YKKDSILFGATSVDFSVSGRLLFAGYNDY----------TINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD 285 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg----------~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D 285 (320)
...+.. .+..++|||||++|++++.++ .|.+||+.++. ...+..|...+..++|+|||++|+.++.+
T Consensus 416 ~~~~~~--~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 416 ERSREA--MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp EECSSS--CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred ccCCCC--CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecc
Confidence 433221 245788999999998887644 89999998776 66678888899999999999999999998
Q ss_pred CceEeeecc
Q psy14961 286 TTLRDEESK 294 (320)
Q Consensus 286 ~~ir~~~~~ 294 (320)
+..+.|+..
T Consensus 493 ~~~~~~~~~ 501 (1045)
T 1k32_A 493 SLDPSPDRV 501 (1045)
T ss_dssp CCCCEECSS
T ss_pred cCCcCcchh
Confidence 888888743
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=2.1e-20 Score=161.45 Aligned_cols=249 Identities=12% Similarity=0.122 Sum_probs=182.2
Q ss_pred CeEeecccceeEEEEEeCcc--ceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCccccccccc-c----cccCeEEEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPAT--WVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVA-T----HTSFISCCI 72 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~--~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~----h~~~v~~~~ 72 (320)
|.+||..+++....+..+.. .+..++|+|+|+++ ++++.++.|.+||+.... ....+. . |...+..+.
T Consensus 13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE----TLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC----EEEEEECCBTTEEEECTTCEE
T ss_pred EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC----eEeeEEcCCcccccccccceE
Confidence 46899998888776665432 47889999999865 556668899999975321 111121 1 122566788
Q ss_pred ecCCCCEEEEEe------------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961 73 FPNSDQQILTGS------------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT 140 (320)
Q Consensus 73 ~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~ 140 (320)
|+++++.+++++ .++.|.+||+.+++.+..+.. ...+..+++ +++|+.|+++ ++.|.+||+.+
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~--s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAW--ARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEE--CTTSSCEEEE--SSSEEEEETTT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEE--CCCCCEEEEe--CCeEEEEECCC
Confidence 999999988886 579999999998887766654 345566666 5568878777 68899999999
Q ss_pred CcEEEEeccCC--c--cccC-----------CC-----------------------eEEEEECcCCeee-eeecCCCCCe
Q psy14961 141 GYCVQSFEGHH--N--LITD-----------DK-----------------------LVNIWDMRTGYCV-QSFEGHQSDV 181 (320)
Q Consensus 141 ~~~~~~~~~~~--~--~~~~-----------d~-----------------------~i~iwd~~~~~~~-~~~~~~~~~v 181 (320)
++....+.... . .... ++ .+.+||+.+++.. ..+..+...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 243 (337)
T 1pby_B 164 GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243 (337)
T ss_dssp TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred CcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCce
Confidence 98776664332 1 1111 11 4689999887654 2344566678
Q ss_pred EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961 182 NSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM 261 (320)
Q Consensus 182 ~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~ 261 (320)
.+++|+|+|++++++ ++.|.+||+.+++.+..+.... .+..++|+|+|++|++++.++.|.+||..+++.+..+.
T Consensus 244 ~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 244 FSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPH---SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp EEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred eeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCC---ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEE
Confidence 899999999998888 7999999999887766554332 34678999999999999889999999998888777765
Q ss_pred cC
Q psy14961 262 GH 263 (320)
Q Consensus 262 ~h 263 (320)
.+
T Consensus 319 ~~ 320 (337)
T 1pby_B 319 LP 320 (337)
T ss_dssp CG
T ss_pred cC
Confidence 44
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=1.6e-20 Score=162.25 Aligned_cols=251 Identities=14% Similarity=0.091 Sum_probs=177.7
Q ss_pred CEEEEecCCCeEEEEEecccCCccccccccc-cccc-CeEEEEecCCCCEEE-EEeCCCeEEEEECCCcceeeecccC--
Q psy14961 32 SVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTS-FISCCIFPNSDQQIL-TGSGDCTCALWDVESSQLLQSFHGH-- 106 (320)
Q Consensus 32 ~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~-~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~-- 106 (320)
.+|++++.++.|.+||+... .....+. .+.. .+..+.|+++++.++ ++..++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM----AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT----EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCC----cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 47899999999999997532 1222222 2211 367788999997765 4556789999999998877655431
Q ss_pred ---ccceeEEEEeeCCCCCEEEEEe------------CCCeEEEEeCCCCcEEEEeccCCc------------cccCCCe
Q psy14961 107 ---TGELMDLDLAPSETGNTFVSGS------------SDKLVNIWDMRTGYCVQSFEGHHN------------LITDDKL 159 (320)
Q Consensus 107 ---~~~v~~~~~~~~~~~~~l~s~~------------~dg~i~lwd~~~~~~~~~~~~~~~------------~~~~d~~ 159 (320)
...+..+++ +++|+.+++++ .++.|.+||+.+++.+..+..... +...++.
T Consensus 78 ~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 155 (337)
T 1pby_B 78 EERVKSLFGAAL--SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD 155 (337)
T ss_dssp TEEEECTTCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS
T ss_pred ccccccccceEE--CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCe
Confidence 124555666 55788888886 579999999998877665532111 1122567
Q ss_pred EEEEECcCCeeeeeecCCC--CCeEEEEEcCCCCEEEEeeC-CC-----------------------eEEEEECCCCeeE
Q psy14961 160 VNIWDMRTGYCVQSFEGHQ--SDVNSVKFHPSGDAVATGSD-DA-----------------------TCRLFDLRADKEV 213 (320)
Q Consensus 160 i~iwd~~~~~~~~~~~~~~--~~v~~v~~~p~g~~l~s~s~-dg-----------------------~i~iwd~~~~~~~ 213 (320)
+.+||+.+++....+..+. .+ +.|+|+|..++..+. ++ .|.+||+.+++..
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 9999999998877665443 33 378999987655443 33 4689999887654
Q ss_pred eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 214 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
..........+..++|+|+|++++++ ++.|.+||..+++.+..+.. ...+.+++|+|||++|++++.|+.|++|+.
T Consensus 233 -~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 233 -MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp -EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred -EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 22211111234578999999999988 68999999988877766553 346789999999999999999999999997
Q ss_pred ch
Q psy14961 294 KN 295 (320)
Q Consensus 294 ~~ 295 (320)
+.
T Consensus 309 ~~ 310 (337)
T 1pby_B 309 ET 310 (337)
T ss_dssp TT
T ss_pred cC
Confidence 53
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=3.4e-21 Score=183.48 Aligned_cols=281 Identities=10% Similarity=0.018 Sum_probs=180.2
Q ss_pred EeecccceeE-EEEEeCc-----------------cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccc
Q psy14961 3 IWDGLTQTKE-HSVTMPA-----------------TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH 64 (320)
Q Consensus 3 ~W~~~~~~~~-~~~~~~~-----------------~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h 64 (320)
+||..+++.. ..+..+. ..|.+++|+|| ..++.+ .++.+++||+... ....+..+
T Consensus 47 ~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~-----~~~~l~~~ 119 (706)
T 2z3z_A 47 VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR-----KVTYLFDT 119 (706)
T ss_dssp EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT-----EEEEEECC
T ss_pred EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCCC-----ceEEccCC
Confidence 7998887762 2233232 35899999999 555555 3599999998532 12233445
Q ss_pred ccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-----cceeeecccCccc--------------eeEEEEeeCCCCCEEE
Q psy14961 65 TSFISCCIFPNSDQQILTGSGDCTCALWDVES-----SQLLQSFHGHTGE--------------LMDLDLAPSETGNTFV 125 (320)
Q Consensus 65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~~~l~ 125 (320)
...+.++.|+++++.|+++ .|+.|++||+.+ ++.......+... +..+.| +|+|+.|+
T Consensus 120 ~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~--SpDg~~la 196 (706)
T 2z3z_A 120 NEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFW--SPKGSCLA 196 (706)
T ss_dssp TTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEE--CTTSSEEE
T ss_pred cccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEE--CCCCCEEE
Confidence 5667888999999998885 689999999988 7665544333332 355666 56799999
Q ss_pred EEeCCC----eEEEEeCCCCcE-EEEeccC-CccccCCCeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCCCEEEEee
Q psy14961 126 SGSSDK----LVNIWDMRTGYC-VQSFEGH-HNLITDDKLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSGDAVATGS 197 (320)
Q Consensus 126 s~~~dg----~i~lwd~~~~~~-~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g~~l~s~s 197 (320)
+++.|. .+.+.+...... .....-. ......+..|.+||+.+++..... ..|...+.+++|+|+|+.|++++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 887332 122222221111 1111000 000123467899999888755443 24667899999999999999887
Q ss_pred CCC-----eEEEEECCCC-eeEeEEecCcc--eeeeEEEEEec--CCcEEEEEeCCCeEEEEcCC-CCeEEEEeecCCCc
Q psy14961 198 DDA-----TCRLFDLRAD-KEVACYKKDSI--LFGATSVDFSV--SGRLLFAGYNDYTINVWDSL-KCCRVNHLMGHENR 266 (320)
Q Consensus 198 ~dg-----~i~iwd~~~~-~~~~~~~~~~~--~~~~~~~~~s~--~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h~~~ 266 (320)
.|+ .|.+||+.++ ........... ......+.|+| +|++++++..++.+++|+.. .+..+..+..|...
T Consensus 277 ~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~ 356 (706)
T 2z3z_A 277 VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE 356 (706)
T ss_dssp ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE
Confidence 765 8999999988 33222221111 00124578999 99999999999999999764 45566777788888
Q ss_pred eeE-EEECcCCCeEEEecC-CC----ceEeeec
Q psy14961 267 VSC-LQVSPDGTAFSSGSW-DT----TLRDEES 293 (320)
Q Consensus 267 i~~-i~~s~~~~~l~s~s~-D~----~ir~~~~ 293 (320)
+.. ++|+|||+.|+.++. ++ .|..|+.
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 877 899999987765544 43 4555554
No 143
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=2e-19 Score=157.47 Aligned_cols=267 Identities=11% Similarity=0.061 Sum_probs=166.9
Q ss_pred eEee--cccceeEEEEEeCccceEEEEEcCCCCEEEEecCC----CeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961 2 IIWD--GLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLD----NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN 75 (320)
Q Consensus 2 ~~W~--~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d----g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 75 (320)
++|. ..+++.......+......++|+|+|++|++++.+ +.+.+|+++..............+......+.+
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-- 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-- 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--
Confidence 4554 34444332222245566778999999999998876 799999986432222222223333444555666
Q ss_pred CCCEEEEEe-CCCeEEEEECCCcceeeecc---cC-----------ccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCC
Q psy14961 76 SDQQILTGS-GDCTCALWDVESSQLLQSFH---GH-----------TGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMR 139 (320)
Q Consensus 76 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~---~~-----------~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~ 139 (320)
+++.+++++ .++.|.+|++.....+..+. .+ ...+.++++ +|+|+++++++ .++.|.+|++.
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~v~v~~~~ 185 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI--TPDGKYLLADDLGTDQIHKFNIN 185 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE--CTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE--CCCCCEEEEEeCCCCEEEEEEEc
Confidence 677777776 57899999987543322111 01 122345655 56788666554 47889999876
Q ss_pred CCcE------EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCee
Q psy14961 140 TGYC------VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKE 212 (320)
Q Consensus 140 ~~~~------~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~ 212 (320)
.... +... +........+...+..++|+|+|+++++++ .++.|.+||+.+++.
T Consensus 186 ~~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 186 PNANADNKEKFLTK--------------------GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp TTCCTTTCCCCEEE--------------------EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred CCCCcccccceeec--------------------ccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 4321 1000 000000112334567899999999887766 689999999986643
Q ss_pred EeE--EecCc-ceeeeEEEEEecCCcEEEEEeC--CCeEEEEcCC--CCe--EEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961 213 VAC--YKKDS-ILFGATSVDFSVSGRLLFAGYN--DYTINVWDSL--KCC--RVNHLMGHENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 213 ~~~--~~~~~-~~~~~~~~~~s~~~~~l~~g~~--dg~v~~wd~~--~~~--~~~~~~~h~~~i~~i~~s~~~~~l~s~s 283 (320)
... ..... .......++|+|||++|+++.. ++.|.+|++. ++. .+..+.. ...+.+++|+|||++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 221 11111 1123468999999999877665 4899999874 233 3444444 55788999999999888777
Q ss_pred -CCCceEeeec
Q psy14961 284 -WDTTLRDEES 293 (320)
Q Consensus 284 -~D~~ir~~~~ 293 (320)
.++.|++|+.
T Consensus 325 ~~~~~v~v~~~ 335 (361)
T 3scy_A 325 RDTNVIQIFER 335 (361)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 6789999764
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=3e-21 Score=173.49 Aligned_cols=207 Identities=13% Similarity=0.069 Sum_probs=151.0
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCc-------ccc----cccccccccCeEEEEecCCCCEEE----E
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDS-------SAK----KKTVATHTSFISCCIFPNSDQQIL----T 82 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~-------~~~----~~~~~~h~~~v~~~~~~~~~~~l~----s 82 (320)
+...++.+++++++.++++++.++ +++|+....... ... ......+...|.++.|++++++|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 344578899999999999999888 889875311000 000 001123456799999999999999 7
Q ss_pred EeCCCeEEEEECCCc--------ce---eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC
Q psy14961 83 GSGDCTCALWDVESS--------QL---LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH 151 (320)
Q Consensus 83 ~~~dg~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~ 151 (320)
|+.|+.|++||+.++ +. +..+.+|...|.+++|+|. +++.|++++.||.|++||++++..+
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~-~~~~las~s~Dg~v~iwD~~~~~~~------- 185 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPT-VPSMVAVCLADGSIAVLQVTETVKV------- 185 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSS-CTTEEEEEETTSCEEEEEESSSEEE-------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCC-CCCEEEEEECCCeEEEEEcCCCcce-------
Confidence 888999999998664 21 3556678999999998764 2679999999999999998876332
Q ss_pred ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-----eeeeE
Q psy14961 152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI-----LFGAT 226 (320)
Q Consensus 152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~ 226 (320)
....+|...|.+++|+|+|++|++|+.||+|++||++ ++....+..+.. ...+.
T Consensus 186 --------------------~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 186 --------------------CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp --------------------EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred --------------------eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence 1223477789999999999999999999999999998 444433332211 12567
Q ss_pred EEEEecCCcEEEEEe-CCC------eEEEEcCCCC
Q psy14961 227 SVDFSVSGRLLFAGY-NDY------TINVWDSLKC 254 (320)
Q Consensus 227 ~~~~s~~~~~l~~g~-~dg------~v~~wd~~~~ 254 (320)
++.|++++.++++.+ .+| .+++|++.+.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 899999988875533 443 3889997653
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=8.1e-21 Score=188.42 Aligned_cols=283 Identities=11% Similarity=0.077 Sum_probs=199.4
Q ss_pred CeEeecccceeEEEEEeCccce-------EEEEEcCCCCEEEEecCC----C--eEEEEEecccCCcc------------
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWV-------MACAYAPSGSVVASGGLD----N--KVTVYAIALEDDSS------------ 55 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V-------~~~~~~~~~~~l~s~~~d----g--~i~v~~~~~~~~~~------------ 55 (320)
|++||..+++ ...+..|...+ .+++|+|||+++++++.+ + .|.+|++.......
T Consensus 82 i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~s 160 (1045)
T 1k32_A 82 LYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFA 160 (1045)
T ss_dssp EEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEE
T ss_pred EEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeC
Confidence 4689988766 34566677777 899999999988887755 3 46666653211000
Q ss_pred ---------------------------------cccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceee
Q psy14961 56 ---------------------------------AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQ 101 (320)
Q Consensus 56 ---------------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~ 101 (320)
.....+..|...+.+..|+++ ..+++++.|+.+++|.+.. +....
T Consensus 161 pG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~ 239 (1045)
T 1k32_A 161 DGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLR 239 (1045)
T ss_dssp TTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCE
T ss_pred CCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcce
Confidence 001122356677778888766 5667778889999997653 33334
Q ss_pred ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC--------------------------Ccccc
Q psy14961 102 SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH--------------------------HNLIT 155 (320)
Q Consensus 102 ~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~--------------------------~~~~~ 155 (320)
.+..|. .+...+++| +|+.|+.+ .++.|.+||+..... ..+..+ .....
T Consensus 240 ~l~~~~-~~~~~~~Sp--DG~~la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~ 314 (1045)
T 1k32_A 240 KHTSFT-DYYPRHLNT--DGRRILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV 314 (1045)
T ss_dssp ECCCCC-SSCEEEEEE--SSSCEEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE
T ss_pred EecCCC-CcceeeEcC--CCCEEEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEE
Confidence 444444 345556654 68888877 489999999844332 233221 11112
Q ss_pred CCCeEEEEECcCCeeeeeecCCCC-CeEEEEEcCCCCEEEEeeCCCeEE-EEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961 156 DDKLVNIWDMRTGYCVQSFEGHQS-DVNSVKFHPSGDAVATGSDDATCR-LFDLRADKEVACYKKDSILFGATSVDFSVS 233 (320)
Q Consensus 156 ~d~~i~iwd~~~~~~~~~~~~~~~-~v~~v~~~p~g~~l~s~s~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 233 (320)
.++.+.+|+...+... .+..|.. .+..++|+ +|+.++.++.++.+. +||+..++..... .+ ...+..++|+||
T Consensus 315 ~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~--~~~~~~~~~SpD 389 (1045)
T 1k32_A 315 SRGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-EN--LGNVFAMGVDRN 389 (1045)
T ss_dssp ETTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-CC--CCSEEEEEECTT
T ss_pred EcCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-CC--ccceeeeEECCC
Confidence 3567888988776544 3556776 89999999 999999999888888 9999876543322 22 123578899999
Q ss_pred CcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCC----------ceEeeecch
Q psy14961 234 GRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDT----------TLRDEESKN 295 (320)
Q Consensus 234 ~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~----------~ir~~~~~~ 295 (320)
|++|++++.++.|.+||+.++.......+|...+.+++|||||++|++++.++ .|++|+...
T Consensus 390 G~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 390 GKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 99999999999999999988877766668999999999999999999988754 899999643
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=3.3e-21 Score=179.66 Aligned_cols=232 Identities=12% Similarity=0.009 Sum_probs=165.3
Q ss_pred ccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccc-cCeEEEEecCCCCEEEEEeC---CCeEEEEE
Q psy14961 19 ATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSDQQILTGSG---DCTCALWD 93 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~---dg~v~iwd 93 (320)
..+|++++|+|||+.|++++. ||.++||+++.. ....+..|. ..+....|+++ +.+++++. +...++|.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-----~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-----ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-----EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC-----CcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 457999999999999999887 999999997421 122344444 57888999987 67777765 45566765
Q ss_pred CCC---cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961 94 VES---SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC 170 (320)
Q Consensus 94 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 170 (320)
++. +... .+.... .....+++|+.++..+++++.++ +.+||+.+++....
T Consensus 95 ~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l------------------------ 147 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLREL------------------------ 147 (582)
T ss_dssp EETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEE------------------------
T ss_pred EeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEe------------------------
Confidence 432 2222 232222 23345677765544455555544 44888776543221
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEeeCC----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC--
Q psy14961 171 VQSFEGHQSDVNSVKFHPSGDAVATGSDD----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY-- 244 (320)
Q Consensus 171 ~~~~~~~~~~v~~v~~~p~g~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-- 244 (320)
.. +.. .+++|+|||+++++++.+ +.|++||+.+++.... ..+. .....++|||||++|+++..++
T Consensus 148 ---~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l-~~~~--~~~~~~~~SpDG~~l~~~~~~~~~ 218 (582)
T 3o4h_A 148 ---AR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF-DSGE--GSFSSASISPGMKVTAGLETAREA 218 (582)
T ss_dssp ---EE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE-CCSS--CEEEEEEECTTSCEEEEEECSSCE
T ss_pred ---ec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe-ecCC--CccccceECCCCCEEEEccCCCee
Confidence 11 111 688999999999988877 7899999988765432 2222 1247889999999999888888
Q ss_pred eEEEEcCCCCeEEEEeecCCCceeEEE--------ECcCCCeEEEecCCCceEeeec
Q psy14961 245 TINVWDSLKCCRVNHLMGHENRVSCLQ--------VSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 245 ~v~~wd~~~~~~~~~~~~h~~~i~~i~--------~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.|.+||..++... .+.+|...+..++ |+|||+++++++.|+++++|+.
T Consensus 219 ~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 219 RLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 8999999887766 6778888887788 9999999999999999999997
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=1.1e-19 Score=158.18 Aligned_cols=240 Identities=10% Similarity=0.034 Sum_probs=171.3
Q ss_pred cceEEEEEcCCCCEEEEecC-------CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEE
Q psy14961 20 TWVMACAYAPSGSVVASGGL-------DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCAL 91 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~-------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~i 91 (320)
..+..++|+|++++|+.++. ++.|.+||.... .....+. .......+.++++++.++++ ..++.|.+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~----~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL----EVTQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC----CEEEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC----eEEEEEe-cCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 45678999999998888774 567999986422 1122222 22345678888999866555 45799999
Q ss_pred EECCCcceeeecccCccc---------eeEEEEeeCCCCCEEEEEe--CCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961 92 WDVESSQLLQSFHGHTGE---------LMDLDLAPSETGNTFVSGS--SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV 160 (320)
Q Consensus 92 wd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~l~s~~--~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i 160 (320)
||+.+++.+..+..+... ...+.++ ++|+.+++++ .++.|.+||+.+++.+..+
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~------------- 180 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD--DATNTVYISGIGKESVIWVVDGGNIKLKTAI------------- 180 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE--TTTTEEEEEEESSSCEEEEEETTTTEEEEEE-------------
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEEC--CCCCEEEEEecCCCceEEEEcCCCCceEEEe-------------
Confidence 999999887776654322 4556664 4677777665 4677888887766544332
Q ss_pred EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc--ceeeeEEEEEecCCcEEE
Q psy14961 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS--ILFGATSVDFSVSGRLLF 238 (320)
Q Consensus 161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~ 238 (320)
..+...+.+++|+|+|+++++++.++.+.+||+.+++....+.... .......++|+|++++++
T Consensus 181 --------------~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 181 --------------QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp --------------CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred --------------cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 2233346678999999999999999999999999988766554311 122346789999999877
Q ss_pred EEeC-CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCe-EEEecCCCceEeeecch
Q psy14961 239 AGYN-DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTA-FSSGSWDTTLRDEESKN 295 (320)
Q Consensus 239 ~g~~-dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~-l~s~s~D~~ir~~~~~~ 295 (320)
+++. ++.|.+||..+++.+..+..+. ..+++|+|||+. +++...+++|.+|+...
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 7664 5999999998887776665433 257999999995 55555799999999743
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1.4e-19 Score=156.26 Aligned_cols=234 Identities=11% Similarity=0.117 Sum_probs=159.4
Q ss_pred EEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeC-CCeEEEEECCCcce-eee
Q psy14961 26 AYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSG-DCTCALWDVESSQL-LQS 102 (320)
Q Consensus 26 ~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~-~~~ 102 (320)
.|.+++. .+++++.++.|.+||+... .....+..+.... ++.|+++++.+++++. ++.|.+||+.+++. ...
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTL----EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTC----CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccc----ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence 3666555 4677888999999997532 1222233344445 8999999997777665 89999999998887 666
Q ss_pred cccCccceeEEEEeeCCCCCEEEEEeCCC---eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCC
Q psy14961 103 FHGHTGELMDLDLAPSETGNTFVSGSSDK---LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQS 179 (320)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~~~l~s~~~dg---~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 179 (320)
+..+..+..++++ +++|++++++..++ .|.+||+.+++.+..+ . +..
T Consensus 79 ~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~---------------------------~-~~~ 128 (331)
T 3u4y_A 79 IQEGQSSMADVDI--TPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI---------------------------P-IPY 128 (331)
T ss_dssp EEECSSCCCCEEE--CTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE---------------------------E-CCT
T ss_pred cccCCCCccceEE--CCCCCEEEEecCCCCcccEEEEECCCCCeEEEE---------------------------E-CCC
Confidence 6666555544666 55788888555553 7888888776544332 1 122
Q ss_pred CeEEEEEcCCCCEEE-EeeCCCe-EEEEECCCCeeEeEEe--cCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCC
Q psy14961 180 DVNSVKFHPSGDAVA-TGSDDAT-CRLFDLRADKEVACYK--KDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKC 254 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~-s~s~dg~-i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~ 254 (320)
...+++|+|+|++++ +...++. +.+|++.....+.... .......+..++|+|+|+++++++ .++.|.+||..++
T Consensus 129 ~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 129 DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 457999999998654 4456678 9999987644332111 001112357889999999665554 6899999998877
Q ss_pred eE---EEEeecCCCceeEEEECcCCCeEE-EecCCCceEeeecch
Q psy14961 255 CR---VNHLMGHENRVSCLQVSPDGTAFS-SGSWDTTLRDEESKN 295 (320)
Q Consensus 255 ~~---~~~~~~h~~~i~~i~~s~~~~~l~-s~s~D~~ir~~~~~~ 295 (320)
+. +..+.. ...+.+++|+|||++|+ +...++.|.+|+.+.
T Consensus 209 ~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 209 ENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp TSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred cccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 66 655554 46678999999999665 445688899999654
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=9.5e-20 Score=173.50 Aligned_cols=261 Identities=13% Similarity=0.119 Sum_probs=175.5
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecc-----cCCccccccccccccc---------
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIAL-----EDDSSAKKKTVATHTS--------- 66 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~-----~~~~~~~~~~~~~h~~--------- 66 (320)
|++||..+++.. .+..+...+..++|+|||++|+++ .++.|++|++.. ... ......+..
T Consensus 103 i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~----~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 103 LVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA----IAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp EEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC----EESCSCCBTTEEESSCCG
T ss_pred EEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc----EEeccCCCCCeEcccchh
Confidence 468999877654 344455678889999999999995 689999999864 211 111111212
Q ss_pred -----CeEEEEecCCCCEEEEEe---------------------------------CCCeEEEEECCCcceeeecc--cC
Q psy14961 67 -----FISCCIFPNSDQQILTGS---------------------------------GDCTCALWDVESSQLLQSFH--GH 106 (320)
Q Consensus 67 -----~v~~~~~~~~~~~l~s~~---------------------------------~dg~v~iwd~~~~~~~~~~~--~~ 106 (320)
.+.++.|++++++|++++ .+..|.+||+.+++...... .|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 247889999999999887 45789999999887544332 34
Q ss_pred ccceeEEEEeeCCCCCEEEEEeCCC-----eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCe
Q psy14961 107 TGELMDLDLAPSETGNTFVSGSSDK-----LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDV 181 (320)
Q Consensus 107 ~~~v~~~~~~~~~~~~~l~s~~~dg-----~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v 181 (320)
...+..++| +++|+.|++++.++ .|.+||+.+++....+... ........+
T Consensus 257 ~~~~~~~~~--spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~----------------------~~~~~~~~~ 312 (706)
T 2z3z_A 257 EKFLTNLSW--SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE----------------------TDKHYVEPL 312 (706)
T ss_dssp TCEEEEEEE--CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE----------------------ECSSCCCCC
T ss_pred ceeEeeEEE--ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc----------------------cCCCeECcc
Confidence 556666766 55788899887765 7888888776322221100 000011124
Q ss_pred EEEEEcC--CCCEEEEeeCCCeEEEEECC-CCeeEeEEecCcceeeeEE-EEEecCCcEEEEEeC-CC----eEEEEcCC
Q psy14961 182 NSVKFHP--SGDAVATGSDDATCRLFDLR-ADKEVACYKKDSILFGATS-VDFSVSGRLLFAGYN-DY----TINVWDSL 252 (320)
Q Consensus 182 ~~v~~~p--~g~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~-~~~s~~~~~l~~g~~-dg----~v~~wd~~ 252 (320)
.+++|+| +|+++++++.|+.+++|+++ .++.+....... ..+.. ++|+|+|+.|+.++. ++ .|..||..
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~--~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE--WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS--SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC--eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 5689999 99999999999999999875 444443333322 12333 789999998766654 43 56667766
Q ss_pred CCeEEEEeecCCCceeEEEECcCCCeEEEecCC----CceEeeecch
Q psy14961 253 KCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWD----TTLRDEESKN 295 (320)
Q Consensus 253 ~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D----~~ir~~~~~~ 295 (320)
++. .. ...|...+.+++|||||++|+.+..+ +.+++|+...
T Consensus 391 ~~~-~~-~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 391 GGK-TK-DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp CCC-CE-ESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred CCC-ce-eccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 544 22 33477789999999999988876544 4599998543
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=4.4e-20 Score=156.04 Aligned_cols=220 Identities=12% Similarity=0.166 Sum_probs=157.6
Q ss_pred EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeeecccCc-cceeEE
Q psy14961 36 SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQSFHGHT-GELMDL 113 (320)
Q Consensus 36 s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~-~~v~~~ 113 (320)
.++.|+.|++||+... ....+..|...+.++.|+++++++++++ ++.|++||+.+ ++.......+. ..+.++
T Consensus 17 ~~~~~~~i~~~d~~~~-----~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR-----KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp -CCCCEEEEEEETTTT-----EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred CCCcceeEEEEeCCCC-----ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccce
Confidence 4567899999997532 1234556888999999999999999887 78999999998 77766655553 566777
Q ss_pred EEeeCCCCCEEEEEeC--CCeEEEEeC--CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC
Q psy14961 114 DLAPSETGNTFVSGSS--DKLVNIWDM--RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS 189 (320)
Q Consensus 114 ~~~~~~~~~~l~s~~~--dg~i~lwd~--~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~ 189 (320)
+|+ ++++.|++++. ++..++|.+ .++. ...+..+ ..+..++|+|+
T Consensus 91 ~~s--pdg~~l~~~~~~~~~~~~l~~~~~~~~~----------------------------~~~~~~~-~~~~~~~~spd 139 (297)
T 2ojh_A 91 GIS--PDGALYAISDKVEFGKSAIYLLPSTGGT----------------------------PRLMTKN-LPSYWHGWSPD 139 (297)
T ss_dssp EEC--TTSSEEEEEECTTTSSCEEEEEETTCCC----------------------------CEECCSS-SSEEEEEECTT
T ss_pred EEC--CCCCEEEEEEeCCCCcceEEEEECCCCc----------------------------eEEeecC-CCccceEECCC
Confidence 774 56889998883 344444433 3221 1112222 24788999999
Q ss_pred CCEEE-EeeCCCeEEEEECC--CCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCC-CCeEEEEeecCC
Q psy14961 190 GDAVA-TGSDDATCRLFDLR--ADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSL-KCCRVNHLMGHE 264 (320)
Q Consensus 190 g~~l~-s~s~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~-~~~~~~~~~~h~ 264 (320)
|+.|+ +++.|+.+++|+++ +++.. ...... ..+..+.|+|+|++|+.++ .++.+.+|+.. .......+..|.
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDSGVET-RLTHGE--GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTCCEE-ECCCSS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred CCEEEEEECCCCceEEEEEECCCCcce-EcccCC--CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 99887 78889999999853 33332 222211 2357789999999888766 58899999864 344566677888
Q ss_pred CceeEEEECcCCCeEEEecCC-----------CceEeeecch
Q psy14961 265 NRVSCLQVSPDGTAFSSGSWD-----------TTLRDEESKN 295 (320)
Q Consensus 265 ~~i~~i~~s~~~~~l~s~s~D-----------~~ir~~~~~~ 295 (320)
..+.+++|+|||++|+.++.| ..|++|+...
T Consensus 217 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 217 YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 899999999999999998876 5689998654
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=1.4e-19 Score=156.60 Aligned_cols=231 Identities=13% Similarity=0.156 Sum_probs=153.8
Q ss_pred EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC-CeEEEEECC--Ccc--eeeecccCc
Q psy14961 33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-CTCALWDVE--SSQ--LLQSFHGHT 107 (320)
Q Consensus 33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g~v~iwd~~--~~~--~~~~~~~~~ 107 (320)
++++++.|+.|++|+++.... ... .....+...+.++.|+++++++++++.+ +.|++|+++ ++. .+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGA-LTL-TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC-EEE-EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEEeCCCCCeEEEEEECCCCc-EEE-eeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence 444557899999999853111 111 1223466678889999999999988876 999999987 444 334444333
Q ss_pred cceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE
Q psy14961 108 GELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF 186 (320)
Q Consensus 108 ~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~ 186 (320)
.+..+++ +++++.+++++. ++.|.+||+..+... .....+.. ...+.+++|
T Consensus 85 -~~~~~~~--s~dg~~l~~~~~~~~~i~~~d~~~~~~~------------------------~~~~~~~~-~~~~~~~~~ 136 (343)
T 1ri6_A 85 -SLTHIST--DHQGQFVFVGSYNAGNVSVTRLEDGLPV------------------------GVVDVVEG-LDGCHSANI 136 (343)
T ss_dssp -CCSEEEE--CTTSSEEEEEETTTTEEEEEEEETTEEE------------------------EEEEEECC-CTTBCCCEE
T ss_pred -CCcEEEE--cCCCCEEEEEecCCCeEEEEECCCCccc------------------------cccccccC-CCCceEEEE
Confidence 5666766 456887766654 788999997432211 11112222 234778999
Q ss_pred cCCCCEEEEee-CCCeEEEEECCC-CeeEeE----EecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCC--CeE-
Q psy14961 187 HPSGDAVATGS-DDATCRLFDLRA-DKEVAC----YKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLK--CCR- 256 (320)
Q Consensus 187 ~p~g~~l~s~s-~dg~i~iwd~~~-~~~~~~----~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~--~~~- 256 (320)
+|+|+++++++ .++.|.+||+.+ ++.... .... ....+..++|+|+++++++++ .++.|.+||... +..
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV-EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS-TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccC-CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 99999887776 899999999987 433221 1111 112356789999999776554 789999999843 221
Q ss_pred -EEEee----cC--CCceeEEEECcCCCeEE-EecCCCceEeeecc
Q psy14961 257 -VNHLM----GH--ENRVSCLQVSPDGTAFS-SGSWDTTLRDEESK 294 (320)
Q Consensus 257 -~~~~~----~h--~~~i~~i~~s~~~~~l~-s~s~D~~ir~~~~~ 294 (320)
..... ++ ...+.+++|+|||++|+ +++.|+.|++|+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 216 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 22222 11 23577899999998766 66689999999976
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.4e-19 Score=157.06 Aligned_cols=235 Identities=9% Similarity=0.040 Sum_probs=160.1
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc-cCeEEEEecCCCCEEEE-EeCCCeEEEEECCCcceee
Q psy14961 24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSDQQILT-GSGDCTCALWDVESSQLLQ 101 (320)
Q Consensus 24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~~ 101 (320)
.+++++++.++++++.++.|.+||+... .....+..+. .....+.|+++++.+++ +..++.|.+||+.+++.+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD----TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT----EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC----cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 4568889999999999999999997532 1222232222 14567889999886654 4568999999999888776
Q ss_pred ecccCc------cceeEEEEeeCCCCCEEEEEeCC------------CeEEEEeCCCCcEEEEeccCCccccCCCeEEEE
Q psy14961 102 SFHGHT------GELMDLDLAPSETGNTFVSGSSD------------KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIW 163 (320)
Q Consensus 102 ~~~~~~------~~v~~~~~~~~~~~~~l~s~~~d------------g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iw 163 (320)
.+.... ..+..+++ +++|+.+++++.+ +.|.+||+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-------------------- 137 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAI--SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-------------------- 137 (349)
T ss_dssp EEESCCSTTEEEECSSCEEE--CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--------------------
T ss_pred EEEcccccccccccccceEE--CCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--------------------
Confidence 654322 22555666 5578899988755 5566666544321
Q ss_pred ECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-----------------------
Q psy14961 164 DMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS----------------------- 220 (320)
Q Consensus 164 d~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----------------------- 220 (320)
.+.+..+. +...+.+++|+|+|+ +++++. .|.+||+.+++....+....
T Consensus 138 ----~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (349)
T 1jmx_B 138 ----AKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHE 209 (349)
T ss_dssp ----BCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCE
T ss_pred ----cceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCccee
Confidence 11111222 223567888999888 555443 38888887776554433211
Q ss_pred --c-----------------------------------------eeeeEEEEEec-CCcEEEEEeCCCeEEEEcCCCCeE
Q psy14961 221 --I-----------------------------------------LFGATSVDFSV-SGRLLFAGYNDYTINVWDSLKCCR 256 (320)
Q Consensus 221 --~-----------------------------------------~~~~~~~~~s~-~~~~l~~g~~dg~v~~wd~~~~~~ 256 (320)
. ......+.|+| ++++++++ ++.|.+||+.+++.
T Consensus 210 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~ 287 (349)
T 1jmx_B 210 FSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKL 287 (349)
T ss_dssp EEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEE
T ss_pred EEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeE
Confidence 0 00124567789 99999888 88999999998877
Q ss_pred EEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 257 VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
+..+.. ...+.+++|+|||++|++++.++.|++|+.+.
T Consensus 288 ~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 288 IKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred EEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 766653 34578999999999998899999999999754
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=1.8e-20 Score=178.93 Aligned_cols=254 Identities=8% Similarity=0.001 Sum_probs=165.7
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEecCCCCEEEEEeCC---------CeE
Q psy14961 22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFPNSDQQILTGSGD---------CTC 89 (320)
Q Consensus 22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~d---------g~v 89 (320)
..+++|+|||+++++ +.||.|++||+..... ...+..|.. .+.++.|++++++|++++.+ +.+
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~----~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTS----TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC----EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcE----EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 467889999997766 7899999999864322 223334443 38899999999999998774 788
Q ss_pred EEEECCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcC
Q psy14961 90 ALWDVESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRT 167 (320)
Q Consensus 90 ~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 167 (320)
.+||+.+++. +.....|...+..++| +|+|+.|+.++. +.|++||+.++........+...+ .......
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~--SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~------~~~g~~~ 164 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGW--GPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGV------IYNGLSD 164 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCB--CSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTT------EEEEECC
T ss_pred EEEECCCCceEeccCCccccccccccEE--CCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCc------eECcccc
Confidence 8999998875 2222233334666655 567999998876 789999998876544332211100 0000000
Q ss_pred CeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC----------------------------------eEEEEECCCCeeE
Q psy14961 168 GYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA----------------------------------TCRLFDLRADKEV 213 (320)
Q Consensus 168 ~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg----------------------------------~i~iwd~~~~~~~ 213 (320)
-+.. +.-...+.+++|+|||++|++++.|+ .|.+||+.+++..
T Consensus 165 --~v~~-ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~ 241 (723)
T 1xfd_A 165 --WLYE-EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD 241 (723)
T ss_dssp --HHHH-HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC
T ss_pred --eeEE-EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee
Confidence 0000 00012347899999999998887543 7999999877643
Q ss_pred eEEecCc----ceeeeEEEEEecCCcEEEEEeC----CCeEEEEcCCCCeEEEEeec-CCCcee----EEEECcCCCeEE
Q psy14961 214 ACYKKDS----ILFGATSVDFSVSGRLLFAGYN----DYTINVWDSLKCCRVNHLMG-HENRVS----CLQVSPDGTAFS 280 (320)
Q Consensus 214 ~~~~~~~----~~~~~~~~~~s~~~~~l~~g~~----dg~v~~wd~~~~~~~~~~~~-h~~~i~----~i~~s~~~~~l~ 280 (320)
....... ....+..++|||||++|++... +..|.+||..++.....+.. |...+. .++|||||+.|+
T Consensus 242 ~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 242 LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEE
Confidence 3332211 0123578999999999877653 35799999888765544433 444443 899999999877
Q ss_pred E--ecCCC------ceEeee
Q psy14961 281 S--GSWDT------TLRDEE 292 (320)
Q Consensus 281 s--~s~D~------~ir~~~ 292 (320)
. +..|+ .|.+|+
T Consensus 322 ~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 322 FIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp EEEEECCSSSSCEEEEEEEC
T ss_pred EEEecccCCCcceeEEEEEe
Confidence 5 45666 466676
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=2.7e-20 Score=167.29 Aligned_cols=208 Identities=14% Similarity=0.063 Sum_probs=145.8
Q ss_pred cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc----------eeee-----cccCccceeEEEEeeCCCCCEEE----E
Q psy14961 66 SFISCCIFPNSDQQILTGSGDCTCALWDVESSQ----------LLQS-----FHGHTGELMDLDLAPSETGNTFV----S 126 (320)
Q Consensus 66 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----------~~~~-----~~~~~~~v~~~~~~~~~~~~~l~----s 126 (320)
..+..+++++++..+++++.|+ +++|+..... .+.. ...+...|.+++|+ ++|++|+ +
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s--pdg~~lav~~~s 113 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALS--CDNLTLSACMMS 113 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEEC--TTSCEEEEEEEE
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEc--CCCCEEEEEEec
Confidence 3567788888889999999887 8898753210 0110 01245668888775 4688999 7
Q ss_pred EeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEE
Q psy14961 127 GSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLF 205 (320)
Q Consensus 127 ~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iw 205 (320)
++.|+.|++||+.++.. +... .. +.......+.+|...|.+++|+|+ +.+|++++.||+|++|
T Consensus 114 gs~d~~v~iwd~~~~~~-----~~~~---~~--------~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSN-----EAKQ---QK--------RPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp TTTEEEEEEEEHHHHHC-----TTCS---SC--------CCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred cCCCceEEEEEcccccc-----CCcC---Cc--------ceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 88999999999865310 0000 00 001123445679999999999998 7899999999999999
Q ss_pred ECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-------CCceeEEEECcCCCe
Q psy14961 206 DLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-------ENRVSCLQVSPDGTA 278 (320)
Q Consensus 206 d~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-------~~~i~~i~~s~~~~~ 278 (320)
|++++........+. ..+.+++|+|+|++|++|+.||.|++||.. +.....+..| ...|.+++|++++.+
T Consensus 178 D~~~~~~~~~~~~~~--~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 178 QVTETVKVCATLPST--VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EESSSEEEEEEECGG--GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EcCCCcceeeccCCC--CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 999875543333222 246789999999999999999999999987 4444444433 338999999999887
Q ss_pred EEEec-CCCc------eEeeecch
Q psy14961 279 FSSGS-WDTT------LRDEESKN 295 (320)
Q Consensus 279 l~s~s-~D~~------ir~~~~~~ 295 (320)
+++.+ .|+. +++|+..+
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCC
T ss_pred EEEEccCCCccCCCCceEEEEecc
Confidence 75433 4433 77888654
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=1.1e-18 Score=154.10 Aligned_cols=285 Identities=11% Similarity=0.012 Sum_probs=179.9
Q ss_pred EeecccceeEEEEEeCccceEE-----EEEcCCCCEEEEecC-CCe--EEEEEecccCCcccccccccccccCeEEEEec
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMA-----CAYAPSGSVVASGGL-DNK--VTVYAIALEDDSSAKKKTVATHTSFISCCIFP 74 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~-----~~~~~~~~~l~s~~~-dg~--i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 74 (320)
++|..++.....++.+...+.. .+|+|||++|+.++. ++. |.+||+.. . ........+...+....|+
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g--~~~~lt~~~~~~~~~~~~s 89 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT--Q--VATQLTEGRGDNTFGGFLS 89 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--C--EEEECCCSSCBCSSSCEEC
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC--C--ceEEeeeCCCCCccceEEc
Confidence 3466667666666555444444 789999999998887 675 55555532 1 1222233444444456799
Q ss_pred CCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEE----------------------eCCCe
Q psy14961 75 NSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG----------------------SSDKL 132 (320)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~----------------------~~dg~ 132 (320)
++++.|+.++.++.+++||+.+++....+..+...+....+..++++..++.. ..+..
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 99999999999999999999998776655555554544555557788887742 24467
Q ss_pred EEEEeCCCCcEEEEe-----------cc-CCccc---cC------CCeEEEEECcCCeeeeeecCCC--CCeEEEEEcCC
Q psy14961 133 VNIWDMRTGYCVQSF-----------EG-HHNLI---TD------DKLVNIWDMRTGYCVQSFEGHQ--SDVNSVKFHPS 189 (320)
Q Consensus 133 i~lwd~~~~~~~~~~-----------~~-~~~~~---~~------d~~i~iwd~~~~~~~~~~~~~~--~~v~~v~~~p~ 189 (320)
|.+||+.+++..... .+ ....+ .. ...|.++|...+.. ..+..+. ..+..++|+|+
T Consensus 170 l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 170 LMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTT
T ss_pred EEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCC
Confidence 999999887643321 11 11111 11 23566677655433 3333333 35778999999
Q ss_pred CCEEEEeeC-CC----eEEEEECCCCeeEeEEecCcce---eeeEEEEEecCCcEEEEE---------eCCCeEEEEcCC
Q psy14961 190 GDAVATGSD-DA----TCRLFDLRADKEVACYKKDSIL---FGATSVDFSVSGRLLFAG---------YNDYTINVWDSL 252 (320)
Q Consensus 190 g~~l~s~s~-dg----~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~l~~g---------~~dg~v~~wd~~ 252 (320)
|+.|+..+. ++ .|.+||+.+++........... .......|+|||+.|+.. ..+..|.+||..
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 997755442 22 3999999988653322221100 001123699999988754 446689999988
Q ss_pred CCeEEEEeecCCC-----------ceeEEEECcCCCeEEEec-CCCceEeeec
Q psy14961 253 KCCRVNHLMGHEN-----------RVSCLQVSPDGTAFSSGS-WDTTLRDEES 293 (320)
Q Consensus 253 ~~~~~~~~~~h~~-----------~i~~i~~s~~~~~l~s~s-~D~~ir~~~~ 293 (320)
.+.. ..+..|.. .+.+++|+|||+.|+.++ .++...+|..
T Consensus 329 ~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 329 NGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp TTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 7654 44555655 578899999999877665 5777777654
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=3e-18 Score=150.51 Aligned_cols=247 Identities=11% Similarity=0.024 Sum_probs=161.1
Q ss_pred cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCE--EEEEe-------------
Q psy14961 20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQ--ILTGS------------- 84 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s~~------------- 84 (320)
..+..++|+|+|++|++++.+ .+.+|+++... ..........+ +....+.+++++++ +++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 356789999999999999887 99999985211 11111111111 22445778898884 44553
Q ss_pred CCCeEEEEECC-Ccceeeecc----cCccceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCC-CCcEEEEeccCCccccCC
Q psy14961 85 GDCTCALWDVE-SSQLLQSFH----GHTGELMDLDLAPSETGNTFVSGSS-DKLVNIWDMR-TGYCVQSFEGHHNLITDD 157 (320)
Q Consensus 85 ~dg~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~-~~~~~~~~~~~~~~~~~d 157 (320)
.++.+.+|++. .++....+. .+...+.++++ +++|++++++.. ++.|++||+. +++...
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--spdG~~l~~~~~~~~~v~~~~~~~~g~~~~------------ 182 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVF--DPTETYLYSADLTANKLWTHRKLASGEVEL------------ 182 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEE--CTTSSEEEEEETTTTEEEEEEECTTSCEEE------------
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEE--CCCCCEEEEEcCCCCEEEEEEECCCCCEEE------------
Confidence 68999999997 355443332 13445666666 567888887654 6789999986 554211
Q ss_pred CeEEEEECcCCeeeeee--cCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECC--CCeeEe---EEecCcc----ee--
Q psy14961 158 KLVNIWDMRTGYCVQSF--EGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLR--ADKEVA---CYKKDSI----LF-- 223 (320)
Q Consensus 158 ~~i~iwd~~~~~~~~~~--~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~--~~~~~~---~~~~~~~----~~-- 223 (320)
+..+ ..|...+..++|+|+|+++++++. ++.+.+|+++ +++... ....... ..
T Consensus 183 -------------~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 249 (365)
T 1jof_A 183 -------------VGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE 249 (365)
T ss_dssp -------------EEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred -------------eeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccc
Confidence 0111 123456889999999999887765 7899999875 344321 1111100 01
Q ss_pred -----eeEEEE-EecCCcEEEEEeCC-C-----eEEEEcCC-CCeEEE---EeecCCCceeEEEECc---CCCeEEEecC
Q psy14961 224 -----GATSVD-FSVSGRLLFAGYND-Y-----TINVWDSL-KCCRVN---HLMGHENRVSCLQVSP---DGTAFSSGSW 284 (320)
Q Consensus 224 -----~~~~~~-~s~~~~~l~~g~~d-g-----~v~~wd~~-~~~~~~---~~~~h~~~i~~i~~s~---~~~~l~s~s~ 284 (320)
.+..++ |+|||++|+++..+ . .|.+|++. ++.... ....+...+..++|+| ||++|++++.
T Consensus 250 ~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 250 TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc
Confidence 356789 99999998877542 2 89999975 444332 1333555678899999 8999999987
Q ss_pred C-CceEeeecchH
Q psy14961 285 D-TTLRDEESKNR 296 (320)
Q Consensus 285 D-~~ir~~~~~~~ 296 (320)
+ ++|++|+....
T Consensus 330 ~~~~v~v~~~~~~ 342 (365)
T 1jof_A 330 QEGWLEIYRWKDE 342 (365)
T ss_dssp SSCEEEEEEEETT
T ss_pred CCCeEEEEEEchh
Confidence 5 89999987544
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=5.2e-18 Score=147.13 Aligned_cols=248 Identities=13% Similarity=0.087 Sum_probs=168.5
Q ss_pred CeEeecccceeEEEEEeCc-cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCccccccccc-cc-----ccCeEEEE
Q psy14961 1 MIIWDGLTQTKEHSVTMPA-TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVA-TH-----TSFISCCI 72 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~-~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h-----~~~v~~~~ 72 (320)
|.+||..+++....+..+. ..+..++|+|+|++++ ++..++.|.+||+.... ....+. .+ ...+..+.
T Consensus 23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~----~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK----NTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEEEEESCCSTTEEEECSSCEE
T ss_pred EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc----EEEEEEcccccccccccccceE
Confidence 4689999888776666543 1567899999998654 55678999999975321 111222 11 22367788
Q ss_pred ecCCCCEEEEEeCC------------CeEEEEECCCccee---eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 73 FPNSDQQILTGSGD------------CTCALWDVESSQLL---QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 73 ~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
|+++++++++++.+ +.|.+||+.+++.. ..+. +...+.++++ +++|+ +++++.+ |.+||
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~--s~dg~-l~~~~~~--i~~~d 172 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRA--ADDGS-LYVAGPD--IYKMD 172 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEE--CTTSC-EEEESSS--EEEEC
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeE--CCCCc-EEEccCc--EEEEe
Confidence 99999999988865 89999999885433 2333 2335666666 45677 6655443 99999
Q ss_pred CCCCcEEEEeccCCcc-----------------------------ccCC-----------CeEEEEECcCCee-eeeecC
Q psy14961 138 MRTGYCVQSFEGHHNL-----------------------------ITDD-----------KLVNIWDMRTGYC-VQSFEG 176 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~-----------------------------~~~d-----------~~i~iwd~~~~~~-~~~~~~ 176 (320)
+.+++.+..+...... ...+ ..+..+|..+++. ...+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (349)
T 1jmx_B 173 VKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 252 (349)
T ss_dssp TTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc
Confidence 9998877766432100 0000 0111244444432 122233
Q ss_pred CCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961 177 HQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC 255 (320)
Q Consensus 177 ~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~ 255 (320)
+...+.+++|+| +|++++++ ++.|.+||+.+++.+..+.... .+..++|+|+|++|++++.++.|.+||..+.+
T Consensus 253 ~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 253 LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS---CCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC---CccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 555788999999 99998888 8899999999988766554332 24578999999998888889999999999888
Q ss_pred EEEEeecC
Q psy14961 256 RVNHLMGH 263 (320)
Q Consensus 256 ~~~~~~~h 263 (320)
.+..+..+
T Consensus 328 ~~~~~~~~ 335 (349)
T 1jmx_B 328 KVKNIKLP 335 (349)
T ss_dssp EEEEEECS
T ss_pred eeeeeecC
Confidence 77766543
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=5.9e-19 Score=164.43 Aligned_cols=246 Identities=12% Similarity=0.072 Sum_probs=165.4
Q ss_pred eEeecccceeEEEEEeCc-cceEEEEEcCCCCEEEEecC---CCeEEEEEecc--cCCcccccccccccccCeEEEEecC
Q psy14961 2 IIWDGLTQTKEHSVTMPA-TWVMACAYAPSGSVVASGGL---DNKVTVYAIAL--EDDSSAKKKTVATHTSFISCCIFPN 75 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~-~~V~~~~~~~~~~~l~s~~~---dg~i~v~~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~ 75 (320)
.||++.+++. ..+..+. ..|.+++|+|| +++++++. +....+|.++. ..... .+.... ......|++
T Consensus 47 ~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~----~l~~~~-~~~~~~~s~ 119 (582)
T 3o4h_A 47 NAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ----RLEAVK-PMRILSGVD 119 (582)
T ss_dssp EEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE----ECTTSC-SBEEEEEEE
T ss_pred eEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc----cccCCC-CceeeeeCC
Confidence 5899755443 3444444 58899999999 77777765 55678887764 22211 222221 233456666
Q ss_pred CCC-EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC----CeEEEEeCCCCcEEEEeccC
Q psy14961 76 SDQ-QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD----KLVNIWDMRTGYCVQSFEGH 150 (320)
Q Consensus 76 ~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~lwd~~~~~~~~~~~~~ 150 (320)
+++ .+++.+.++.+.+||+.+++.......+ . .++.++ |+|+.|++++.+ +.|++||+.+++.
T Consensus 120 dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~s--pDG~~la~~~~~~~~~~~i~~~d~~~g~~------- 187 (582)
T 3o4h_A 120 TGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSD--IRGDLIAGLGFFGGGRVSLFTSNLSSGGL------- 187 (582)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEE--EETTEEEEEEEEETTEEEEEEEETTTCCC-------
T ss_pred CCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEEC--CCCCEEEEEEEcCCCCeEEEEEcCCCCCc-------
Confidence 664 3445455555669999888765443322 2 555554 579999988766 5677777655432
Q ss_pred CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC--eEEEEECCCCeeEeEEecCcc-e-----
Q psy14961 151 HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA--TCRLFDLRADKEVACYKKDSI-L----- 222 (320)
Q Consensus 151 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~-~----- 222 (320)
..+..|...+.+++|+|||+.|+++..++ .|++||+.+++.. ....+.. .
T Consensus 188 ---------------------~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~ 245 (582)
T 3o4h_A 188 ---------------------RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRP 245 (582)
T ss_dssp ---------------------EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCC
T ss_pred ---------------------eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhh
Confidence 13345667789999999999999888888 8999999987765 3332211 1
Q ss_pred eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCc---eEeeecc
Q psy14961 223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTT---LRDEESK 294 (320)
Q Consensus 223 ~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~---ir~~~~~ 294 (320)
.......|+|||.++++++.++++++|++ ++... .+...|.+++|+ |++++++++.+.+ +.+++..
T Consensus 246 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp SEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred ccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 01123339999999999999999999998 54443 345789999999 9999999988755 5666643
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=4.8e-17 Score=142.66 Aligned_cols=263 Identities=12% Similarity=0.077 Sum_probs=180.7
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCcccccccccc------c
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVAT------H 64 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~------h 64 (320)
+.+||..+++....+.....+ .++|+|||++++.++ .++.|.+||.... ....++.. +
T Consensus 33 v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~----~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 33 VHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL----TFEKEISLPPKRVQG 106 (361)
T ss_dssp EEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC----CEEEEEEECTTBCCB
T ss_pred EEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC----cEEEEEEcCcccccc
Confidence 358998888877666655444 899999999999886 3677999987421 11122211 1
Q ss_pred ccCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeee-cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-
Q psy14961 65 TSFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQS-FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT- 140 (320)
Q Consensus 65 ~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~- 140 (320)
......+.+++++++|+++.. +++|.+||+.+++.+.. +... ....+.+.|.. ...+++.+.||.+.+|++..
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~-~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNR-PRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTS-SSEEEEEETTSSEEEEEECTT
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCC-CeeEEEECCCCcEEEEEECCC
Confidence 233456889999999998874 58999999999988777 5532 12223344432 25778888999999998754
Q ss_pred CcEEEEe------ccCC--------------ccccCCCeEEEEECcCCee--eeeecC------C----CCCeEEEEEcC
Q psy14961 141 GYCVQSF------EGHH--------------NLITDDKLVNIWDMRTGYC--VQSFEG------H----QSDVNSVKFHP 188 (320)
Q Consensus 141 ~~~~~~~------~~~~--------------~~~~~d~~i~iwd~~~~~~--~~~~~~------~----~~~v~~v~~~p 188 (320)
++..... .... ..+..++.+.++|+..... ...+.- + ......++|+|
T Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred CcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 4443111 1100 1123456788888865421 111110 0 01111378999
Q ss_pred CCCEEEEeeC-----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC--e
Q psy14961 189 SGDAVATGSD-----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC--C 255 (320)
Q Consensus 189 ~g~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~--~ 255 (320)
+++.++.+.. .++|.+||+.+.+.+..++... +..++|+|+|++|++++. ++|.+||..++ +
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPK 338 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcce
Confidence 9888766542 3589999999998887776554 578899999999998886 99999999999 8
Q ss_pred EEEEeecCCCceeEEEECcCCC
Q psy14961 256 RVNHLMGHENRVSCLQVSPDGT 277 (320)
Q Consensus 256 ~~~~~~~h~~~i~~i~~s~~~~ 277 (320)
.+.++.++......++++|||+
T Consensus 339 ~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 339 LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEETTSCSSEEEEEECCCSC
T ss_pred eeEEeccCCCCcEEEEecCCCC
Confidence 8888777888889999999986
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=4.8e-16 Score=131.46 Aligned_cols=241 Identities=12% Similarity=0.146 Sum_probs=163.6
Q ss_pred cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc---ccccccCeEEEEe-cCCCCEEEEEeC-CCeEEEEEC
Q psy14961 20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT---VATHTSFISCCIF-PNSDQQILTGSG-DCTCALWDV 94 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~---~~~h~~~v~~~~~-~~~~~~l~s~~~-dg~v~iwd~ 94 (320)
....+++++++++++++...++.|.+|+.... ....... ...+......+.+ .+++..+++... ++.|.+||
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN- 106 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence 45789999999998888888999999986421 1111100 0123456778888 455544444433 88999999
Q ss_pred CCcceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961 95 ESSQLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 95 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 173 (320)
.+++.+..+.. +...+..+++ +++|+.+++...++.|.+||.. +..+..+.
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~------------------------- 158 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTV--DNKGRIIVVECKVMRVIIFDQN-GNVLHKFG------------------------- 158 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCEEEEEE-------------------------
T ss_pred CCCcEEEEecCccCCCceEEEE--eCCCCEEEEECCCCEEEEEcCC-CCEEEEeC-------------------------
Confidence 45665555532 2344566655 5568877777778889999854 33322221
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC-eEEEEcCC
Q psy14961 174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY-TINVWDSL 252 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-~v~~wd~~ 252 (320)
..++...+..++++|+|+.+++.+.++.|.+||... +.+..+........+..++++|+|.++++...++ .|.+||..
T Consensus 159 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 159 CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 012334578999999999888888899999999754 4444443322122457899999999888887775 99999954
Q ss_pred CCeEEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 253 KCCRVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 253 ~~~~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
+..+..+..+.. .+.+++++|+|+++++ +.|++|++|+..
T Consensus 238 -g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 238 -GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp -SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred -CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 455555655433 4789999999998887 579999999863
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=8.2e-17 Score=140.85 Aligned_cols=237 Identities=11% Similarity=0.148 Sum_probs=147.7
Q ss_pred cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC----CeEEEEECCC--cce--eeecccCccc
Q psy14961 38 GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD----CTCALWDVES--SQL--LQSFHGHTGE 109 (320)
Q Consensus 38 ~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~v~iwd~~~--~~~--~~~~~~~~~~ 109 (320)
+.++.|.+|.++............ +......+.|++++++|++++.+ +.|.+|+++. +.+ +.....+...
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~ 101 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGAD 101 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSC
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCC
Confidence 346789999886432222222222 55666778999999999999886 7999998765 432 2333323334
Q ss_pred eeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961 110 LMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP 188 (320)
Q Consensus 110 v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 188 (320)
...+++ +++.+++++ .++.+.+|++.....+..+. ..... .+.-......+...+.+++|+|
T Consensus 102 p~~~~~----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~------------~~~~~-~g~~~~~~~~~~~~~~~~~~sp 164 (361)
T 3scy_A 102 PCYLTT----NGKNIVTANYSGGSITVFPIGQDGALLPAS------------DVIEF-KGSGPDKERQTMPHLHCVRITP 164 (361)
T ss_dssp EEEEEE----CSSEEEEEETTTTEEEEEEBCTTSCBCSCS------------EEEEC-CCCCSCTTTCSSCCEEEEEECT
T ss_pred cEEEEE----CCCEEEEEECCCCEEEEEEeCCCCcCcccc------------eeEEc-cCCCCCccccCCCcceEEEECC
Confidence 444443 567777665 67899999986432211100 00000 0000000112334578899999
Q ss_pred CCCEEEEee-CCCeEEEEECCCCee------Ee------EEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCC
Q psy14961 189 SGDAVATGS-DDATCRLFDLRADKE------VA------CYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKC 254 (320)
Q Consensus 189 ~g~~l~s~s-~dg~i~iwd~~~~~~------~~------~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~ 254 (320)
+|+++++++ .++.+.+|++..... +. .... .....+..++|+|+|++|++++ .++.|.+||...+
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 999765554 588999998875431 11 1111 1112356799999999888777 6899999997755
Q ss_pred eE--EEEe---ecCCCceeEEEECcCCCeEEEecC--CCceEeeecc
Q psy14961 255 CR--VNHL---MGHENRVSCLQVSPDGTAFSSGSW--DTTLRDEESK 294 (320)
Q Consensus 255 ~~--~~~~---~~h~~~i~~i~~s~~~~~l~s~s~--D~~ir~~~~~ 294 (320)
.. +..+ ..+.....+++|+|||++|+.+.. +++|++|+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 244 MLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred ceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 33 2223 233456789999999998866655 5899999974
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.2e-18 Score=166.29 Aligned_cols=242 Identities=12% Similarity=0.074 Sum_probs=158.3
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc---CeEEEEecCCCCEEEEEeC---------CCeEEE
Q psy14961 24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS---FISCCIFPNSDQQILTGSG---------DCTCAL 91 (320)
Q Consensus 24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~---------dg~v~i 91 (320)
.++|+|+|++++++ .|+.|++|++.... ....+..|.. .+.++.|++++++|++++. ++.|++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCc----EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence 67899999766655 59999999985322 1122223322 3889999999999998876 789999
Q ss_pred EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe-ccCCccccCCCeEEEEECcCCee
Q psy14961 92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF-EGHHNLITDDKLVNIWDMRTGYC 170 (320)
Q Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~-~~~~~~~~~d~~i~iwd~~~~~~ 170 (320)
||+.+++.+.... ....+..++| +|+|+.|+.+. ++.|++||+.++...... .++..
T Consensus 95 ~d~~~g~~~~~~~-l~~~~~~~~~--SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~------------------ 152 (719)
T 1z68_A 95 YDLSNGEFVRGNE-LPRPIQYLCW--SPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGREN------------------ 152 (719)
T ss_dssp EETTTTEECCSSC-CCSSBCCEEE--CSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTT------------------
T ss_pred EECCCCcccccee-cCcccccceE--CCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcC------------------
Confidence 9999887631111 1245666666 55789998885 789999999887654321 11100
Q ss_pred eeeecCCCCC---------eEEEEEcCCCCEEEEeeCCC----------------------------------eEEEEEC
Q psy14961 171 VQSFEGHQSD---------VNSVKFHPSGDAVATGSDDA----------------------------------TCRLFDL 207 (320)
Q Consensus 171 ~~~~~~~~~~---------v~~v~~~p~g~~l~s~s~dg----------------------------------~i~iwd~ 207 (320)
..+.+|... ..+++|+|||++|++++.|. .|++||+
T Consensus 153 -~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~ 231 (719)
T 1z68_A 153 -KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT 231 (719)
T ss_dssp -TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES
T ss_pred -CeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC
Confidence 011223222 25799999999999887552 7889999
Q ss_pred CCCeeE--eEEec----CcceeeeEEEEEecCCcEEEEEeCC----CeEEEEc----CCCCeEEEEe----ecCCCcee-
Q psy14961 208 RADKEV--ACYKK----DSILFGATSVDFSVSGRLLFAGYND----YTINVWD----SLKCCRVNHL----MGHENRVS- 268 (320)
Q Consensus 208 ~~~~~~--~~~~~----~~~~~~~~~~~~s~~~~~l~~g~~d----g~v~~wd----~~~~~~~~~~----~~h~~~i~- 268 (320)
.+++.. ..... ......+..++||||++++++.... ..|.+|| ..++.....+ .+|...+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~ 311 (719)
T 1z68_A 232 TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGG 311 (719)
T ss_dssp SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSS
T ss_pred CCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEcc
Confidence 876532 11110 0111235788999998887775432 3488899 7666554434 46777777
Q ss_pred ----EEEECcCCCeEEE--ecCCCc--eEeeec
Q psy14961 269 ----CLQVSPDGTAFSS--GSWDTT--LRDEES 293 (320)
Q Consensus 269 ----~i~~s~~~~~l~s--~s~D~~--ir~~~~ 293 (320)
.++|+|||+.|+. +..++. |.+|+.
T Consensus 312 ~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 312 FFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp SSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred ccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence 8999999996554 445564 555553
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=4.4e-18 Score=162.38 Aligned_cols=283 Identities=7% Similarity=-0.032 Sum_probs=175.8
Q ss_pred CeEeecccceeEEEEEeCcc---ceEEEEEcCCCCEEEEecC---------CCeEEEEEecccCCcccccccccccccCe
Q psy14961 1 MIIWDGLTQTKEHSVTMPAT---WVMACAYAPSGSVVASGGL---------DNKVTVYAIALEDDSSAKKKTVATHTSFI 68 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~---~V~~~~~~~~~~~l~s~~~---------dg~i~v~~~~~~~~~~~~~~~~~~h~~~v 68 (320)
|++||..+++....+..+.. .|.+++|||||++|++++. ++.|++||+..... .....+ ...+
T Consensus 38 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~--~~~~~l---~~~~ 112 (719)
T 1z68_A 38 IVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF--VRGNEL---PRPI 112 (719)
T ss_dssp EEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE--CCSSCC---CSSB
T ss_pred EEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc--ccceec---Cccc
Confidence 46899988876543333322 3889999999999998876 68999999853211 000112 2457
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec-ccCccce-----------------eEEEEeeCCCCCEEEEEeCC
Q psy14961 69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF-HGHTGEL-----------------MDLDLAPSETGNTFVSGSSD 130 (320)
Q Consensus 69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~l~s~~~d 130 (320)
..+.|+|+|+.|+.+. ++.|++|++.+++..... .++...+ ..+.| +|||+.|++++.|
T Consensus 113 ~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w--SPDG~~la~~~~d 189 (719)
T 1z68_A 113 QYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW--SPNGKFLAYAEFN 189 (719)
T ss_dssp CCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE--CTTSSEEEEEEEE
T ss_pred ccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE--CCCCCEEEEEEEC
Confidence 7899999999999886 789999999887664432 2222111 34555 6679999988765
Q ss_pred -CeEEEEeCC---CC--cEEEEeccCC-ccccCCCeEEEEECcCCeee--------eeecCCCCCeEEEEEcCCCCEEEE
Q psy14961 131 -KLVNIWDMR---TG--YCVQSFEGHH-NLITDDKLVNIWDMRTGYCV--------QSFEGHQSDVNSVKFHPSGDAVAT 195 (320)
Q Consensus 131 -g~i~lwd~~---~~--~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~--------~~~~~~~~~v~~v~~~p~g~~l~s 195 (320)
+.+.+|.+. .. .....+.-.. ........+++||+.+++.. ..+.+|...+.+++|+||++.+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQ 269 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEE
Confidence 344444321 10 0111111000 00112347899999887642 223468888999999999877666
Q ss_pred eeC--C--CeEEEEE----CCCCeeEeEEe----cCcceee---eEEEEEecCCcEEEE--EeCCC--eEEEEcCCCCeE
Q psy14961 196 GSD--D--ATCRLFD----LRADKEVACYK----KDSILFG---ATSVDFSVSGRLLFA--GYNDY--TINVWDSLKCCR 256 (320)
Q Consensus 196 ~s~--d--g~i~iwd----~~~~~~~~~~~----~~~~~~~---~~~~~~s~~~~~l~~--g~~dg--~v~~wd~~~~~~ 256 (320)
... + ..|.+|| +.+++...... .+..... ...+.|+|||+.|+. +..+| .|.+||...+.
T Consensus 270 ~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~- 348 (719)
T 1z68_A 270 WLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN- 348 (719)
T ss_dssp EEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-
T ss_pred EeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-
Confidence 432 2 2488899 76665433221 1111111 115689999996554 44555 56677876554
Q ss_pred EEEeecCCCceeEEEECcCCCeEEEecCC-----CceEeeec
Q psy14961 257 VNHLMGHENRVSCLQVSPDGTAFSSGSWD-----TTLRDEES 293 (320)
Q Consensus 257 ~~~~~~h~~~i~~i~~s~~~~~l~s~s~D-----~~ir~~~~ 293 (320)
...+..+...+..+.++ +++.|+..+.+ ++.++|..
T Consensus 349 ~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 349 AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 34455666678888888 77776666554 78888874
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=1.9e-16 Score=137.06 Aligned_cols=251 Identities=15% Similarity=0.102 Sum_probs=170.5
Q ss_pred cceEEEEEcCCCCEEEEecCC------------------------CeEEEEEecccCCcccccccc-cccccCeEEEEec
Q psy14961 20 TWVMACAYAPSGSVVASGGLD------------------------NKVTVYAIALEDDSSAKKKTV-ATHTSFISCCIFP 74 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~d------------------------g~i~v~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~ 74 (320)
..+.+++++|+|+++++.+.+ +.|.+||..... ..... ..+......+.+.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE----ILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC----EEEEECTTTCSSEEEEEEC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe----EEeccCCCccCCceEEEEC
Confidence 468999999999999888777 468888763211 11111 1333456788899
Q ss_pred CCCCEEEEEeCCCeEEEEECCCcc-eeeec---------ccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcE
Q psy14961 75 NSDQQILTGSGDCTCALWDVESSQ-LLQSF---------HGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYC 143 (320)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~ 143 (320)
++++.+++...++.|++||.+... .+..+ ..+......+++.+. ++..+++.+ .++.|++|| ..+..
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~-~g~lyv~d~~~~~~I~~~~-~~g~~ 177 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS-TGAVFVSDGYCNSRIVQFS-PSGKF 177 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT-TCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC-CCeEEEEeCCCCCeEEEEc-CCCCE
Confidence 989888888888999999986542 34433 122334556666431 577777776 689999999 45555
Q ss_pred EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961 144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222 (320)
Q Consensus 144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 222 (320)
+..+...... + ....++-.....++++|+ +..+++...++.|++||..+++.+..+......
T Consensus 178 ~~~~~~~g~~---~--------------~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~ 240 (329)
T 3fvz_A 178 VTQWGEESSG---S--------------SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFG 240 (329)
T ss_dssp EEEECEECCS---S--------------SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTT
T ss_pred EEEeccCCCC---C--------------CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccC
Confidence 4443211000 0 000112234689999998 777788888999999999877776655432222
Q ss_pred eeeEEEEEecCCcEEEEE-------eCCCeEEEEcCCCCeEEEEe---ecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 223 FGATSVDFSVSGRLLFAG-------YNDYTINVWDSLKCCRVNHL---MGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 223 ~~~~~~~~s~~~~~l~~g-------~~dg~v~~wd~~~~~~~~~~---~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
..+..++|+| +..++.. ..+..|.+||..++..+..+ .++...+.+|+++|+|.++++.+.+++|++|+
T Consensus 241 ~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 241 RNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp TCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred CCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 2345778888 4333333 34558999998888888776 36777899999999999999999999999999
Q ss_pred cc
Q psy14961 293 SK 294 (320)
Q Consensus 293 ~~ 294 (320)
..
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 165
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=3.4e-16 Score=136.13 Aligned_cols=230 Identities=15% Similarity=0.137 Sum_probs=143.5
Q ss_pred CeEeecccce--eEEEEEeCccceEEEEEcCCCCEEEEec-CCCeEEEEEecccCCcccccccccc---------cccCe
Q psy14961 1 MIIWDGLTQT--KEHSVTMPATWVMACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSAKKKTVAT---------HTSFI 68 (320)
Q Consensus 1 ~~~W~~~~~~--~~~~~~~~~~~V~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~~~~~~~~~~---------h~~~v 68 (320)
|.+||+.+++ .+.....+...+..++|+|+|++|++++ .++.+.+|++...... .....+.. +...+
T Consensus 65 v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~-~~~~~~~~~~~~p~~~~~~~~~ 143 (347)
T 3hfq_A 65 IAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL-TLTDTVQHSGHGPRPEQDGSHI 143 (347)
T ss_dssp EEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE-EEEEEEECCCCCSSTTCSSCCE
T ss_pred EEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe-eecceeecCCCCCCccccCCCc
Confidence 4688886655 3333333556778999999999888887 6799999998532221 11111111 12347
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECC-Ccceee--ecccC-ccceeEEEEeeCCCCCEEEE-EeCCCeEEEEeCCC--C
Q psy14961 69 SCCIFPNSDQQILTGSGDCTCALWDVE-SSQLLQ--SFHGH-TGELMDLDLAPSETGNTFVS-GSSDKLVNIWDMRT--G 141 (320)
Q Consensus 69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~--~~~~~-~~~v~~~~~~~~~~~~~l~s-~~~dg~i~lwd~~~--~ 141 (320)
.++.|+++++.+++...++.|++|++. ++++.. .+..+ ......++| +++|+++++ ...++.+.+|++.. +
T Consensus 144 ~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~--spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 144 HYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF--SPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE--CTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred eEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE--CCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 789999999955555568899999998 444321 12222 224455555 567886665 56678999998763 3
Q ss_pred cEEE--EeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCC---eeEeE
Q psy14961 142 YCVQ--SFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRAD---KEVAC 215 (320)
Q Consensus 142 ~~~~--~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~---~~~~~ 215 (320)
.... .+.... .+ + .....+..++|+|+|++| ++...++.|.+|++... +.+..
T Consensus 222 ~~~~~~~~~~~~---------------~~-----~-~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 222 AFTQLGIVKTIP---------------AD-----Y-TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp EEEEEEEEESSC---------------TT-----C-CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred ceEEeeeeeecC---------------CC-----C-CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 2110 100000 00 0 011357889999999987 55667899999998733 22222
Q ss_pred EecCcceeeeEEEEEecCCcEEEEEeC-CCeEEEE--cCCCCeE
Q psy14961 216 YKKDSILFGATSVDFSVSGRLLFAGYN-DYTINVW--DSLKCCR 256 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~v~~w--d~~~~~~ 256 (320)
..... ..+..++|+|+|++|++++. ++.|.+| |..++..
T Consensus 281 ~~~~~--~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 281 ISTEG--DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EECSS--SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EecCC--CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 22211 12467899999999888875 4899999 5555443
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=2.4e-16 Score=138.21 Aligned_cols=245 Identities=13% Similarity=0.074 Sum_probs=167.6
Q ss_pred CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEEEEECCCcceeeecccC--
Q psy14961 39 LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCALWDVESSQLLQSFHGH-- 106 (320)
Q Consensus 39 ~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~-- 106 (320)
.|+.|.+||.... .....+..+..+ .+.++++++++++++ .++.|.+||+.+.+.+..+...
T Consensus 29 ~d~~v~v~D~~t~----~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDYTNG----KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEETTTC----CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred ccCeEEEEECCCC----eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 4789999986422 222334444444 789999999999886 3678999999988887766532
Q ss_pred ----ccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEE-eccCC--------------ccccCCCeEEEEEC
Q psy14961 107 ----TGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQS-FEGHH--------------NLITDDKLVNIWDM 165 (320)
Q Consensus 107 ----~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~-~~~~~--------------~~~~~d~~i~iwd~ 165 (320)
......+++ +++|++|++++. ++.|.+||+.+++.+.. +.... ...+.|+.+.+++.
T Consensus 103 ~~~~g~~p~~i~~--spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 103 RVQGLNYDGLFRQ--TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp BCCBCCCGGGEEE--CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred ccccCCCcceEEE--CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 123344555 667999998874 57899999999988776 43211 12346778888887
Q ss_pred cC-Ceeee------eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE--eEEecCc--------ceeeeEEE
Q psy14961 166 RT-GYCVQ------SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV--ACYKKDS--------ILFGATSV 228 (320)
Q Consensus 166 ~~-~~~~~------~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~~--------~~~~~~~~ 228 (320)
.. ++... .+..+..++ .+.++|++..++..+.++.+.++|+...... ..+.... ...+...+
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 54 44331 122222222 2344677878877888999999998754322 1111100 01111236
Q ss_pred EEecCCcEEEEEeC-----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 229 DFSVSGRLLFAGYN-----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 229 ~~s~~~~~l~~g~~-----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
+|+|+++.++++.. .++|.+||..+.+.+.++..+. +.+|+|+|||++|++++. ++|.+||.+.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 89999888877653 3589999999999999888777 999999999999999887 9999999654
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=9.7e-17 Score=141.66 Aligned_cols=279 Identities=10% Similarity=-0.027 Sum_probs=170.0
Q ss_pred eecccceeEEEEEeCcc-----ceEEEEEcCCCCEEEEecCC-C--eEEEEEecccCCcccccccccccc-cCeEEEEec
Q psy14961 4 WDGLTQTKEHSVTMPAT-----WVMACAYAPSGSVVASGGLD-N--KVTVYAIALEDDSSAKKKTVATHT-SFISCCIFP 74 (320)
Q Consensus 4 W~~~~~~~~~~~~~~~~-----~V~~~~~~~~~~~l~s~~~d-g--~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~ 74 (320)
.|..++.....+..+.. ++..++|+|||++|+.+... + .|.+|++... . ...+..+. .......|+
T Consensus 15 ~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~--~---~~~l~~~~~~~~~~~~~s 89 (396)
T 3c5m_A 15 VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ--Q---AVQLTEGKGDNTFGGFIS 89 (396)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT--E---EEECCCSSCBCTTTCEEC
T ss_pred ecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCC--c---EEEeecCCCCccccceEC
Confidence 36677766655543322 36778999999998776443 3 5666665321 1 11222222 222336789
Q ss_pred CCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeE---EE--------------EeeCCCCCEEEEE-----eCCCe
Q psy14961 75 NSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMD---LD--------------LAPSETGNTFVSG-----SSDKL 132 (320)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~---~~--------------~~~~~~~~~l~s~-----~~dg~ 132 (320)
++++.|+.++.++.+.+||+.+++.......+...... +. ...+++++.++.+ ..+..
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 99999999999999999999887765444433321111 11 1234555555443 35668
Q ss_pred EEEEeCCCCcEEEEe-----------cc-CCc-c--ccC--C----CeEEEEECcCCeeeeeecCC-CCCeEEEEEcCCC
Q psy14961 133 VNIWDMRTGYCVQSF-----------EG-HHN-L--ITD--D----KLVNIWDMRTGYCVQSFEGH-QSDVNSVKFHPSG 190 (320)
Q Consensus 133 i~lwd~~~~~~~~~~-----------~~-~~~-~--~~~--d----~~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~p~g 190 (320)
|.+||+.+++..... .+ ... + +.. . ..|.+||+..+......... ...+..++|+|+|
T Consensus 170 l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg 249 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG 249 (396)
T ss_dssp EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTS
T ss_pred EEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCC
Confidence 999999887643322 11 111 1 111 1 35777777655433222211 2357889999999
Q ss_pred CEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEec-CCcEEEEEe----------------CCCeEEE
Q psy14961 191 DAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSV-SGRLLFAGY----------------NDYTINV 248 (320)
Q Consensus 191 ~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~g~----------------~dg~v~~ 248 (320)
++|+.++.+ +.|.+||+.+++......... .. ..|+| +|+++++++ .+..|.+
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~ 324 (396)
T 3c5m_A 250 SAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYV 324 (396)
T ss_dssp SCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEE
T ss_pred CEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEE
Confidence 987766543 459999998776543322221 12 78999 999888764 3478999
Q ss_pred EcCCCCeEEEEeecCCC-----------ceeEEEECcCCCeEEEecC-CCceEeeec
Q psy14961 249 WDSLKCCRVNHLMGHEN-----------RVSCLQVSPDGTAFSSGSW-DTTLRDEES 293 (320)
Q Consensus 249 wd~~~~~~~~~~~~h~~-----------~i~~i~~s~~~~~l~s~s~-D~~ir~~~~ 293 (320)
||...+.. ..+..|.. .+..++|+|||+.|+.++. ++...+|..
T Consensus 325 ~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 325 LNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp EETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 99876653 33455544 2567899999998877764 566666653
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=2.2e-17 Score=158.19 Aligned_cols=242 Identities=11% Similarity=0.082 Sum_probs=156.0
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccccccc-----CeEEEEecCCCCEEEEEeCC---------C
Q psy14961 22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTS-----FISCCIFPNSDQQILTGSGD---------C 87 (320)
Q Consensus 22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~d---------g 87 (320)
..++.|+|||++|+++ |+.|++|++..... ...+..|.. ......|+|+++.|+.++.+ +
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNS----SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCE----EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCce----EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 4578999999998886 89999999854321 122333322 22347889999999998876 5
Q ss_pred eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-eccCCccccCCCeEEEEECc
Q psy14961 88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEGHHNLITDDKLVNIWDMR 166 (320)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~~~~~~~~d~~i~iwd~~ 166 (320)
.+.+||+.+++.. .+..+.+.+...+| +|||+.|+.+. |+.|.+||+.++...+. ..++..
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~--SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~-------------- 154 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTW--SPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKED-------------- 154 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEE--CSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTT--------------
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEE--CCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCcc--------------
Confidence 6679999988764 35556677777766 56799998884 68999999987764321 111110
Q ss_pred CCeeeeeecCCC---------CCeEEEEEcCCCCEEEEeeCCC------------------------------------e
Q psy14961 167 TGYCVQSFEGHQ---------SDVNSVKFHPSGDAVATGSDDA------------------------------------T 201 (320)
Q Consensus 167 ~~~~~~~~~~~~---------~~v~~v~~~p~g~~l~s~s~dg------------------------------------~ 201 (320)
..+.++. .....++|||||++||.++.|. +
T Consensus 155 -----~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~ 229 (740)
T 4a5s_A 155 -----IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK 229 (740)
T ss_dssp -----TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE
T ss_pred -----ceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE
Confidence 0111121 1223578889888887764221 5
Q ss_pred EEEEECCC---C---eeEeEEecC----cceeeeEEEEEecCCcEEEEEeC----CCeEEEEcCCCCe----E--EEEe-
Q psy14961 202 CRLFDLRA---D---KEVACYKKD----SILFGATSVDFSVSGRLLFAGYN----DYTINVWDSLKCC----R--VNHL- 260 (320)
Q Consensus 202 i~iwd~~~---~---~~~~~~~~~----~~~~~~~~~~~s~~~~~l~~g~~----dg~v~~wd~~~~~----~--~~~~- 260 (320)
|.+||+.+ + +... .... .....+..++|+|||+.++.... +..|.+||..++. . +..+
T Consensus 230 l~v~d~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 230 FFVVNTDSLSSVTNATSIQ-ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp EEEEETTSCCSSSCCCEEE-ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred EEEEECCCCCCCCcceEEE-ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 78889887 6 2222 2110 01123568899999997766543 3479999977654 1 2223
Q ss_pred -ecCCCcee-----EEEECcCCCeEE-Eec-CCC--ceEeeec
Q psy14961 261 -MGHENRVS-----CLQVSPDGTAFS-SGS-WDT--TLRDEES 293 (320)
Q Consensus 261 -~~h~~~i~-----~i~~s~~~~~l~-s~s-~D~--~ir~~~~ 293 (320)
.+|...|. .++|+|||+.|+ ..| .+| .|.+|+.
T Consensus 309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 56776665 789999999877 665 344 4666664
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=1.8e-14 Score=122.42 Aligned_cols=252 Identities=12% Similarity=0.090 Sum_probs=158.6
Q ss_pred EEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961 15 VTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93 (320)
Q Consensus 15 ~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 93 (320)
+........+++|+|+|+ +++++..++.|..|+.... ...+..+...+.++.+.+++..+++...++.|.+||
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ------LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC------EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC------eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 344456677899999998 7788888999999987432 223444566788999999888777766678999999
Q ss_pred CCCcceeeecccCc----cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe
Q psy14961 94 VESSQLLQSFHGHT----GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY 169 (320)
Q Consensus 94 ~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 169 (320)
..+++......... ..+..+++ +++|+++++.+..|....++.... ..-...+.|..++.. +.
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~--d~~G~l~vtd~~~g~~~~~~~~~~----------~~~~~~~~l~~~~~~-g~ 163 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCL--APDGSLWFSDPTYGIDKPEEGYGG----------EMELPGRWVFRLAPD-GT 163 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEE--CTTSCEEEEECSHHHHCGGGSSCC----------CCCSSSCEEEEECTT-SC
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEE--CCCCCEEEECCccccccccccccc----------cccCCCcEEEEECCC-CC
Confidence 97776543222111 12334544 556777766321111000000000 000001122222222 11
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECC-CCee---EeEEecCcceeeeEEEEEecCCcEEEEEeCCCe
Q psy14961 170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLR-ADKE---VACYKKDSILFGATSVDFSVSGRLLFAGYNDYT 245 (320)
Q Consensus 170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 245 (320)
...+..+....+.++|+|+|+.+++.+.++.|.+|++. .++. ...+ .. ....+..++++++|.++++. ++.
T Consensus 164 -~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-~~~~p~~i~~d~~G~l~v~~--~~~ 238 (296)
T 3e5z_A 164 -LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV-EPGKTDGLRVDAGGLIWASA--GDG 238 (296)
T ss_dssp -EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC-SSSCCCSEEEBTTSCEEEEE--TTE
T ss_pred -EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC-CCCCCCeEEECCCCCEEEEc--CCe
Confidence 12223344567899999999988878888999999986 3332 1222 11 11123568899999977666 788
Q ss_pred EEEEcCCCCeEEEEeecCCCceeEEEE-CcCCCeEEEecCCCceEeee
Q psy14961 246 INVWDSLKCCRVNHLMGHENRVSCLQV-SPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 246 v~~wd~~~~~~~~~~~~h~~~i~~i~~-s~~~~~l~s~s~D~~ir~~~ 292 (320)
|.+||.. +..+..+..+.. +++++| +|+++.|.+++.++..|+-.
T Consensus 239 v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~ 284 (296)
T 3e5z_A 239 VHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIET 284 (296)
T ss_dssp EEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEEC
T ss_pred EEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEc
Confidence 9999976 666667777777 999999 68999999888887666544
No 170
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.72 E-value=4.7e-15 Score=130.08 Aligned_cols=227 Identities=10% Similarity=0.072 Sum_probs=139.4
Q ss_pred CeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEeCCCeEEEEECC-CcceeeecccC-ccceeEEEEee
Q psy14961 41 NKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGSGDCTCALWDVE-SSQLLQSFHGH-TGELMDLDLAP 117 (320)
Q Consensus 41 g~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~ 117 (320)
+.|.+|+++............. .....+..+.+++++++|++++.+ .|.+|++. ++++....... .+....+ ..
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~--~~ 90 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRAN--DA 90 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGG--CT
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccE--EE
Confidence 5688887753222111111111 122356778999999999999888 99999987 66654322211 1223333 34
Q ss_pred CCCCCE--EEEEe-------------CCCeEEEEeCC-CCcEEEEeccCCccccCCCeEEEEECcCCeeeeee-cCCCCC
Q psy14961 118 SETGNT--FVSGS-------------SDKLVNIWDMR-TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF-EGHQSD 180 (320)
Q Consensus 118 ~~~~~~--l~s~~-------------~dg~i~lwd~~-~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~ 180 (320)
+++|+. +++++ .++.+.+|++. .+.....+ ..+ ..+...
T Consensus 91 spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~------------------------~~~~~~~~~~ 146 (365)
T 1jof_A 91 DTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV------------------------QNYEYQENTG 146 (365)
T ss_dssp TSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE------------------------EEEECCTTCC
T ss_pred CCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE------------------------eeEEeCCCCc
Confidence 667874 44543 56677777764 23221111 001 024456
Q ss_pred eEEEEEcCCCCEEEEee-CCCeEEEEECC-CCeeEe--EEecCcceeeeEEEEEecCCcEEEEEeC-CCeEEEEcCC--C
Q psy14961 181 VNSVKFHPSGDAVATGS-DDATCRLFDLR-ADKEVA--CYKKDSILFGATSVDFSVSGRLLFAGYN-DYTINVWDSL--K 253 (320)
Q Consensus 181 v~~v~~~p~g~~l~s~s-~dg~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg~v~~wd~~--~ 253 (320)
+.+++|+|+|++++++. .++.|.+||+. +++... ..........+..++|+|+|++|+++.+ ++.|.+|+.. +
T Consensus 147 ~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 88999999999887765 46899999998 565422 1211110124578899999999988775 6899998643 3
Q ss_pred CeEE---EEee-------cCCC------ceeEEE-ECcCCCeEEEecCCC------ceEeeecc
Q psy14961 254 CCRV---NHLM-------GHEN------RVSCLQ-VSPDGTAFSSGSWDT------TLRDEESK 294 (320)
Q Consensus 254 ~~~~---~~~~-------~h~~------~i~~i~-~s~~~~~l~s~s~D~------~ir~~~~~ 294 (320)
+... ..+. +|.. .+..++ |+|||++|++++.+. +|++|+..
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 4321 1121 2222 588999 999999988776433 89999874
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=6.8e-16 Score=145.81 Aligned_cols=260 Identities=11% Similarity=0.030 Sum_probs=159.4
Q ss_pred eEeecccceeEEEEEeCccceE---------EEEEc--CCCCE-EEEecC-CCeEEEEEecccCCcccccccccc-----
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVM---------ACAYA--PSGSV-VASGGL-DNKVTVYAIALEDDSSAKKKTVAT----- 63 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~---------~~~~~--~~~~~-l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~----- 63 (320)
.||....+.....+..+...|. +..|+ |||+. |+.++. +..|.+++++.... .....+..
T Consensus 50 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~--~~~~~l~~~~~~~ 127 (662)
T 3azo_A 50 TLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG--AVPRPLTPVSAVG 127 (662)
T ss_dssp EEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC--CCCEECSCCCCST
T ss_pred EEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC--CCCEeccCCccCC
Confidence 3676443333334444444444 45555 99998 776553 44454444320010 11122333
Q ss_pred cccCeEEEEecCCCCEEEEEeCC----------CeEEEEECCC------cceeeecc-cCccceeEEEEeeCCCCCEEEE
Q psy14961 64 HTSFISCCIFPNSDQQILTGSGD----------CTCALWDVES------SQLLQSFH-GHTGELMDLDLAPSETGNTFVS 126 (320)
Q Consensus 64 h~~~v~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s 126 (320)
|...+..+.|+++++.|++++.| ..|.+||+.+ +... .+. .+...+..+.+ +|||+.|+.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~--SpDG~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRL--SPDGRQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEE--CTTSSEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceE--CCCCCEEEE
Confidence 56677889999999999988876 5899999987 5543 333 34455555555 668999988
Q ss_pred EeCCC--------eEEEEeCC-CCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee
Q psy14961 127 GSSDK--------LVNIWDMR-TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS 197 (320)
Q Consensus 127 ~~~dg--------~i~lwd~~-~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s 197 (320)
++.++ .|.+||+. ++... .......+|...+..++|+|+|++++++.
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~------------------------~~~~l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFA------------------------DTRTLLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEE------------------------EEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCCCCCCcEEEEEEECCCCccc------------------------ccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence 77553 45555544 22100 22222334566789999999999778888
Q ss_pred CCC--eEEEEECCCCeeEeEEecCcce------eeeEEEEEecCCcEEEEEeCCCeEEEE--cCCCCeEEEEeecCCCce
Q psy14961 198 DDA--TCRLFDLRADKEVACYKKDSIL------FGATSVDFSVSGRLLFAGYNDYTINVW--DSLKCCRVNHLMGHENRV 267 (320)
Q Consensus 198 ~dg--~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~l~~g~~dg~v~~w--d~~~~~~~~~~~~h~~~i 267 (320)
.++ .|.+||+.+++.......+... .+...++|+|++.+++++.. +.++|| |...+. +..+..|...+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~ 338 (662)
T 3azo_A 261 RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEW 338 (662)
T ss_dssp TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEE
T ss_pred CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeE
Confidence 888 5666676555543222221111 11346889999999999998 999999 655444 56677788888
Q ss_pred eEE-EECcCCCeEEEecCCCceEeee
Q psy14961 268 SCL-QVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 268 ~~i-~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
..+ +++++.-++++++.+....+|.
T Consensus 339 ~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 339 AATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 877 5554444566666666555554
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=1.5e-15 Score=145.39 Aligned_cols=274 Identities=7% Similarity=-0.025 Sum_probs=165.7
Q ss_pred CeEeecccceeEEEEEeCccc---e--EEEEEcCCCCEEEEecCC---------CeEEEEEecccCCccccccccccccc
Q psy14961 1 MIIWDGLTQTKEHSVTMPATW---V--MACAYAPSGSVVASGGLD---------NKVTVYAIALEDDSSAKKKTVATHTS 66 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~---V--~~~~~~~~~~~l~s~~~d---------g~i~v~~~~~~~~~~~~~~~~~~h~~ 66 (320)
|++||..+++....+..+... + ...+|||||++|+.++.+ +.+.+||+... ....+..|..
T Consensus 38 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~-----~~~~l~~~~~ 112 (740)
T 4a5s_A 38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR-----QLITEERIPN 112 (740)
T ss_dssp EEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT-----EECCSSCCCT
T ss_pred EEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC-----cEEEcccCCC
Confidence 579999988865544444322 2 347889999999998876 56679987532 1234556677
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeee-cccCccce-----------------eEEEEeeCCCCCEEEEEe
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS-FHGHTGEL-----------------MDLDLAPSETGNTFVSGS 128 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~v-----------------~~~~~~~~~~~~~l~s~~ 128 (320)
.+....|+|+|+.|+.+. |+.|++|++.++...+. ..++...+ ..+.| +|||+.|+.++
T Consensus 113 ~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~w--SpDg~~la~~~ 189 (740)
T 4a5s_A 113 NTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWW--SPNGTFLAYAQ 189 (740)
T ss_dssp TEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEE--CTTSSEEEEEE
T ss_pred cceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEE--CCCCCEEEEEE
Confidence 899999999999998875 78999999988765432 12222111 12444 67899999887
Q ss_pred CCCe-EEEEeCCCC-------cEEEEecc-CCccccCCCeEEEEECcC---Ce--eeeeec------CCCCCeEEEEEcC
Q psy14961 129 SDKL-VNIWDMRTG-------YCVQSFEG-HHNLITDDKLVNIWDMRT---GY--CVQSFE------GHQSDVNSVKFHP 188 (320)
Q Consensus 129 ~dg~-i~lwd~~~~-------~~~~~~~~-~~~~~~~d~~i~iwd~~~---~~--~~~~~~------~~~~~v~~v~~~p 188 (320)
.|.. +++|++... .....+.- ..........+++||+.+ +. ....+. +|...+..++|+|
T Consensus 190 ~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp 269 (740)
T 4a5s_A 190 FNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 269 (740)
T ss_dssp EECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE
T ss_pred EcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC
Confidence 6544 888875211 01111100 000011233688999988 73 222332 3777899999999
Q ss_pred CCCEEEEee----CCCeEEEEECCCCe-------eEeEE-ecCcceee---eEEEEEecCCcEEE-EEeC-CC--eEEEE
Q psy14961 189 SGDAVATGS----DDATCRLFDLRADK-------EVACY-KKDSILFG---ATSVDFSVSGRLLF-AGYN-DY--TINVW 249 (320)
Q Consensus 189 ~g~~l~s~s----~dg~i~iwd~~~~~-------~~~~~-~~~~~~~~---~~~~~~s~~~~~l~-~g~~-dg--~v~~w 249 (320)
||+.++... .+..|.+||+.+++ ..... ..+..-.. .....|+|||+.|+ ..++ +| .|.+|
T Consensus 270 dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~ 349 (740)
T 4a5s_A 270 QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYF 349 (740)
T ss_dssp TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEE
Confidence 999665543 23479999998876 11111 11111111 23567999999877 6653 34 57778
Q ss_pred cCCCCeEEEEeecCCCceeEEEECcCCC-eEEEecC
Q psy14961 250 DSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGSW 284 (320)
Q Consensus 250 d~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~ 284 (320)
|...+... .+....-.|..+.. +|++ ++++++.
T Consensus 350 ~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 350 QIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNE 383 (740)
T ss_dssp ETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESC
T ss_pred ECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEec
Confidence 87654433 34333445555442 3344 4445544
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=1.1e-13 Score=119.37 Aligned_cols=238 Identities=10% Similarity=0.059 Sum_probs=152.0
Q ss_pred EEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC----CeE
Q psy14961 14 SVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD----CTC 89 (320)
Q Consensus 14 ~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~v 89 (320)
.+..+...+.+++|+++|++++++..++.|.+|+..... .......+...+.++.+.+++..+++...+ +.|
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE----IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC----EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc----EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence 344455667899999999988888889999999764211 111112345678899999888877776666 689
Q ss_pred EEEECCCcceeeecc--cCccceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEeccCCccccCCCeEE
Q psy14961 90 ALWDVESSQLLQSFH--GHTGELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVN 161 (320)
Q Consensus 90 ~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~ 161 (320)
.+||.+++.....+. .+...+..+.+ +++|+.+++... .+.|..+|..+++...
T Consensus 115 ~~~d~~~~~~~~~~~~~~~~~~~~~i~~--d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~---------------- 176 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDLSTAYCIDDMVF--DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP---------------- 176 (333)
T ss_dssp EEECTTSCSCEEEECSSSSCCCEEEEEE--CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE----------------
T ss_pred EEEeCCCCEEEEEEccCccCCcccceEE--CCCCCEEEEeccccccCCCceEEEEeCCCCEEEE----------------
Confidence 999988776542222 22344555655 556776665543 2344444443322110
Q ss_pred EEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC-CeeEeEEe-----cCcceeeeEEEEEecCC
Q psy14961 162 IWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA-DKEVACYK-----KDSILFGATSVDFSVSG 234 (320)
Q Consensus 162 iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~-~~~~~~~~-----~~~~~~~~~~~~~s~~~ 234 (320)
+..+...+..++|+|+|+.+ ++.+.++.|.+||+.+ +.....+. .......+..++++++|
T Consensus 177 ------------~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G 244 (333)
T 2dg1_A 177 ------------IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD 244 (333)
T ss_dssp ------------EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred ------------eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC
Confidence 00112246789999999866 4556688999999864 22221111 00001134678899999
Q ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeecCCC------ceeEEEECcCCCeEEEecCCC
Q psy14961 235 RLLFAGYNDYTINVWDSLKCCRVNHLMGHEN------RVSCLQVSPDGTAFSSGSWDT 286 (320)
Q Consensus 235 ~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~------~i~~i~~s~~~~~l~s~s~D~ 286 (320)
.++++...++.|.+||. .+..+..+..+.. .+.+++|+||++.|+.++.++
T Consensus 245 ~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 245 NLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 98888878899999997 4555555544433 689999999987776665554
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=3.1e-15 Score=131.81 Aligned_cols=221 Identities=14% Similarity=0.023 Sum_probs=145.9
Q ss_pred EEecCCCCEEEEEeC-CC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe
Q psy14961 71 CIFPNSDQQILTGSG-DC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF 147 (320)
Q Consensus 71 ~~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~ 147 (320)
..|+++++.|+.++. ++ .|.+||+.+++.......+...+....| +|+|+.|+.++.++.|++||+.+++....+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~--spdg~~l~~~~~~~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL--SPDDDALFYVKDGRNLMRVDLATLEENVVY 118 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE--CTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE--cCCCCEEEEEeCCCeEEEEECCCCcceeee
Confidence 678999999988887 66 4888899888877666655555444555 567999999999999999999988654332
Q ss_pred ccCCc--------------c-------------------------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961 148 EGHHN--------------L-------------------------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP 188 (320)
Q Consensus 148 ~~~~~--------------~-------------------------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 188 (320)
..+.. . ...+..|.+||+.+++... +..+...+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEET
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECC
Confidence 21111 0 0123578899998886443 334566789999999
Q ss_pred -CCCEEEEeeCC------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC-CC----eEEEEcCCCCeE
Q psy14961 189 -SGDAVATGSDD------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-DY----TINVWDSLKCCR 256 (320)
Q Consensus 189 -~g~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-dg----~v~~wd~~~~~~ 256 (320)
+|+.|+.++.+ ..|.++|+..++...... ......+....|+|||+.|+..+. ++ .|.+||+.++..
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT-HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC-CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee-CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 99988877653 378888877654332222 211112456789999997765442 22 499999887653
Q ss_pred --EEEeecCCCc---eeEEEECcCCCeEEEe---------cCCCceEeeecch
Q psy14961 257 --VNHLMGHENR---VSCLQVSPDGTAFSSG---------SWDTTLRDEESKN 295 (320)
Q Consensus 257 --~~~~~~h~~~---i~~i~~s~~~~~l~s~---------s~D~~ir~~~~~~ 295 (320)
+..+.++... ...++|+|||+.|+.. +.+..|++|+...
T Consensus 277 ~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 277 RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 3333331110 1234799999988754 4567899999654
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=5.6e-14 Score=117.51 Aligned_cols=240 Identities=11% Similarity=0.027 Sum_probs=158.5
Q ss_pred ceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce
Q psy14961 21 WVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL 99 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 99 (320)
...+++++++|++.+ +...++.|.+|+...... . .....+...+.++.+.+++..+++.. ++.|.+||..+...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~--~--~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT--T--VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------E--ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc--c--eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE
Confidence 567899999999777 557788999987532111 1 01112224566788888777555544 88999999876543
Q ss_pred eeecc-cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC
Q psy14961 100 LQSFH-GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178 (320)
Q Consensus 100 ~~~~~-~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 178 (320)
. .+. ........+++ +++|+.+++...++.|.+|+..+...... .....
T Consensus 100 ~-~~~~~~~~~p~~i~~--~~~g~l~v~~~~~~~i~~~~~~~~~~~~~---------------------------~~~~~ 149 (270)
T 1rwi_B 100 T-VLPFDGLNYPEGLAV--DTQGAVYVADRGNNRVVKLAAGSKTQTVL---------------------------PFTGL 149 (270)
T ss_dssp E-ECCCCSCSSEEEEEE--CTTCCEEEEEGGGTEEEEECTTCCSCEEC---------------------------CCCSC
T ss_pred e-eeecCCcCCCcceEE--CCCCCEEEEECCCCEEEEEECCCceeEee---------------------------ccccC
Confidence 3 222 12244556655 45677777766778888886543221100 01112
Q ss_pred CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE
Q psy14961 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN 258 (320)
Q Consensus 179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~ 258 (320)
..+..++++|+|+.+++...++.|.+||.......... .. ....+..++++++|.++++...++.|..||........
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-FT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-CS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-cc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence 24567999999997777777889999998765433211 11 11235678999999877777778899999976544333
Q ss_pred EeecCCCceeEEEECcCCCeEEEecCCCceEeeecchHh
Q psy14961 259 HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNRY 297 (320)
Q Consensus 259 ~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~~ 297 (320)
....+...+.+|+++|+|+++++.+.+++|++++..+..
T Consensus 228 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 228 LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 222344678999999999999999999999999976653
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=8.3e-15 Score=138.38 Aligned_cols=244 Identities=6% Similarity=-0.041 Sum_probs=152.5
Q ss_pred eCccceEEEEEcCCCCEEEEe--cCCCeEEEEEecccCCcccccccccccccCeE---------EEEec--CCCCE-EEE
Q psy14961 17 MPATWVMACAYAPSGSVVASG--GLDNKVTVYAIALEDDSSAKKKTVATHTSFIS---------CCIFP--NSDQQ-ILT 82 (320)
Q Consensus 17 ~~~~~V~~~~~~~~~~~l~s~--~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~s 82 (320)
.|...|..++|++++-++++. +.++...+|...... ....+..|...+. ...|+ |+++. |+.
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG----AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS----CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC----CcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 356788999999887677776 568889999863211 1223444443333 34343 88887 665
Q ss_pred EeC-CCeEEEEECC--C-cceeeeccc-----CccceeEEEEeeCCCCCEEEEEeCC----------CeEEEEeCCCCcE
Q psy14961 83 GSG-DCTCALWDVE--S-SQLLQSFHG-----HTGELMDLDLAPSETGNTFVSGSSD----------KLVNIWDMRTGYC 143 (320)
Q Consensus 83 ~~~-dg~v~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~s~~~d----------g~i~lwd~~~~~~ 143 (320)
++. +..|.++++. + +. ...+.. |...+..++| +++|+.|++++.+ ..|.+||+.++..
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~--spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVL--LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEE--ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEE--CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 543 5667777765 3 43 333433 4455666666 4578999988765 2444555443000
Q ss_pred EEEeccCCccccCCCeEEEEECcCCeeeeeec-CCCCCeEEEEEcCCCCEEEEeeCC--------CeEEEEECC-CC---
Q psy14961 144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE-GHQSDVNSVKFHPSGDAVATGSDD--------ATCRLFDLR-AD--- 210 (320)
Q Consensus 144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~v~~~p~g~~l~s~s~d--------g~i~iwd~~-~~--- 210 (320)
.+ .+.. ..+. .+...+..++|+|||++|+.++.+ ..|.+||+. ++
T Consensus 174 ------------~~---------~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~ 231 (662)
T 3azo_A 174 ------------AD---------RSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFA 231 (662)
T ss_dssp ------------TC---------GGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEE
T ss_pred ------------cc---------CCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccc
Confidence 00 0222 2222 344567789999999999877754 379999998 45
Q ss_pred eeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC--eEEEEcCCCCeEEEEeecCCCc--------eeEEEECcCCCeEE
Q psy14961 211 KEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY--TINVWDSLKCCRVNHLMGHENR--------VSCLQVSPDGTAFS 280 (320)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg--~v~~wd~~~~~~~~~~~~h~~~--------i~~i~~s~~~~~l~ 280 (320)
+.......+. .....+.|+|||++++++..++ .|.+||...+........+... +..++|+|++++++
T Consensus 232 ~~~~l~~~~~--~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 232 DTRTLLGGPE--EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEEEEETT--BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred ccEEeCCCCC--ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 3322222211 1346788999999888888788 6666776555433222222222 56899999999999
Q ss_pred EecCCCceEeee
Q psy14961 281 SGSWDTTLRDEE 292 (320)
Q Consensus 281 s~s~D~~ir~~~ 292 (320)
+++. +++++|.
T Consensus 310 ~~~~-~~~~l~~ 320 (662)
T 3azo_A 310 VHGK-GAAVLGI 320 (662)
T ss_dssp EEBS-SSCEEEE
T ss_pred EEEc-CccEEEE
Confidence 9999 9999994
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=7.4e-14 Score=121.15 Aligned_cols=237 Identities=12% Similarity=0.140 Sum_probs=146.0
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCC---CeEEEEEecccCCcccccccccccccCeEEEEecCCCC
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLD---NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQ 78 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~d---g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 78 (320)
.+||..+++.. .+ ..+..++|+|||+.|+.++.+ +...+|.++..... ...+..+.. +..+.|+++++
T Consensus 46 ~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~---~~~l~~~~~-~~~~~wspdg~ 116 (347)
T 2gop_A 46 VIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS---SKKILEAKN-IRSLEWNEDSR 116 (347)
T ss_dssp EEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE---EEEEEEESE-EEEEEECTTSS
T ss_pred EEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc---eEEEEcCCC-ccceeECCCCC
Confidence 46676655432 22 457789999999999987654 45444443322211 112222333 88899999999
Q ss_pred EEEEEeCC---------------------------CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC
Q psy14961 79 QILTGSGD---------------------------CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK 131 (320)
Q Consensus 79 ~l~s~~~d---------------------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg 131 (320)
.|+.++.+ ..|.+||+.+++.+..+.. . .+..+.++ ++| .+++++.++
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~s--pdg-~~~~~~~~~ 191 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWH--RDK-IVVNVPHRE 191 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEE--TTE-EEEEEECCC
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCC--CCe-EEEEEeccc
Confidence 88877632 5788999988776344443 3 56666665 467 666665542
Q ss_pred -------eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC-----
Q psy14961 132 -------LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD----- 199 (320)
Q Consensus 132 -------~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d----- 199 (320)
...+| ++| +++.. .+..+ ..+..+ +|+|++|+.++.+
T Consensus 192 ~~~~~~~~~~l~-------------------------~~d--~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~ 240 (347)
T 2gop_A 192 IIPQYFKFWDIY-------------------------IWE--DGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYM 240 (347)
T ss_dssp SSCCSSCCEEEE-------------------------EEE--TTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCC
T ss_pred ccccccccccEE-------------------------EeC--CCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCc
Confidence 12222 222 22211 11112 344444 9999988777644
Q ss_pred ---CeEEEEECCCCeeEeEEecCcceeeeEE-EEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcC
Q psy14961 200 ---ATCRLFDLRADKEVACYKKDSILFGATS-VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPD 275 (320)
Q Consensus 200 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~ 275 (320)
..|.+|| +++......... ..+.. +.|+ ++ ++++++.++.+++| +.++.. ..+..+...|.+++|+|
T Consensus 241 ~~~~~l~~~d--~~~~~~l~~~~~--~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~- 311 (347)
T 2gop_A 241 SEHNKLYIYD--GKEVMGILDEVD--RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE- 311 (347)
T ss_dssp CSSCEEEEEC--SSCEEESSTTCC--SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS-
T ss_pred cccceEEEEC--CCceEeccccCC--cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC-
Confidence 3688888 443322222211 22344 7888 88 88999999999999 764433 44566678899999999
Q ss_pred CCeEEEecCCCce-Eeeec
Q psy14961 276 GTAFSSGSWDTTL-RDEES 293 (320)
Q Consensus 276 ~~~l~s~s~D~~i-r~~~~ 293 (320)
.++++++.+++. ++|..
T Consensus 312 -~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 312 -IVVYLKETATRLRELFTW 329 (347)
T ss_dssp -SEEEEEECSSSCCEEEEE
T ss_pred -cEEEEEcCCCChHHheEe
Confidence 677777776664 77765
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=1.1e-13 Score=131.83 Aligned_cols=244 Identities=11% Similarity=0.020 Sum_probs=153.2
Q ss_pred ceEEEEEcCCCCEEEEecCCC-----eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe-------
Q psy14961 21 WVMACAYAPSGSVVASGGLDN-----KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT------- 88 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~dg-----~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~------- 88 (320)
.+.+++|||||++|+.+..++ .|++||+..... ....+ .+ ..+..+.|+++++.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~---~~~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE---LPDVL-ER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE---EEEEE-EE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC---Ccccc-cC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 577899999999998775533 899998853211 11111 11 22567889999999998887766
Q ss_pred ---------EEEEECCCcce----eeecccCccceeEEEEeeCCCCCEEEEEeC-----CCeEEEEeCCCCcEEEEeccC
Q psy14961 89 ---------CALWDVESSQL----LQSFHGHTGELMDLDLAPSETGNTFVSGSS-----DKLVNIWDMRTGYCVQSFEGH 150 (320)
Q Consensus 89 ---------v~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-----dg~i~lwd~~~~~~~~~~~~~ 150 (320)
|++|++.+++. +.....+...+..+.+ +++|++|+.++. +..|.+||+.+...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~--SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~------- 271 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL--SDDGRYVLLSIREGCDPVNRLWYCDLQQESN------- 271 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE--CTTSCEEEEEEECSSSSCCEEEEEEGGGSSS-------
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE--cCCCCEEEEEEEccCCCccEEEEEECccccc-------
Confidence 99999987652 2222223333444544 667888887654 34566666543000
Q ss_pred CccccCCCeEEEEECcCCe-eeeeecCCCCCeEEEEEcCCCCEEEEeeC----CCeEEEEECCCCee---EeEEecCcce
Q psy14961 151 HNLITDDKLVNIWDMRTGY-CVQSFEGHQSDVNSVKFHPSGDAVATGSD----DATCRLFDLRADKE---VACYKKDSIL 222 (320)
Q Consensus 151 ~~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~v~~~p~g~~l~s~s~----dg~i~iwd~~~~~~---~~~~~~~~~~ 222 (320)
.+ .+. ....+..+...+.. .|+|+|+.|+..+. ++.|.+||+.++.. ........ .
T Consensus 272 --~~------------~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~ 335 (710)
T 2xdw_A 272 --GI------------TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-K 335 (710)
T ss_dssp --SS------------CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-S
T ss_pred --cc------------CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-C
Confidence 00 011 12223334444443 48889988766554 34699999987631 12222211 1
Q ss_pred eeeEEEEEecCCcEEEEEeCCCe--EEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEE----EecCCCceEeeecc
Q psy14961 223 FGATSVDFSVSGRLLFAGYNDYT--INVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFS----SGSWDTTLRDEESK 294 (320)
Q Consensus 223 ~~~~~~~~s~~~~~l~~g~~dg~--v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~----s~s~D~~ir~~~~~ 294 (320)
..+..+.|++++.++++...++. |.+||..++..+..+..+.+.|..++++|+++.|+ +....+++..|+..
T Consensus 336 ~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 336 DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 12456788888888888888885 55567656666666777778899999999987655 33356788888854
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=1e-11 Score=104.96 Aligned_cols=260 Identities=7% Similarity=0.001 Sum_probs=168.1
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS 97 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 97 (320)
+...+.+++++++|++.++...++.|.+|+.. .. .. ......+...+..+.+.+++..+++...++.|..||.+ +
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~--~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GK--IT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC--EE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC--eE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 44678999999999988877778899999764 11 11 11112234567888888888777776668899999976 3
Q ss_pred ce-eeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-ecc------------CCc-ccc--CCCeE
Q psy14961 98 QL-LQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEG------------HHN-LIT--DDKLV 160 (320)
Q Consensus 98 ~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~------------~~~-~~~--~d~~i 160 (320)
+. ...+......+..+.+ +++|..+++...++.|.+||. ++..... ... ... .+. ..+.|
T Consensus 88 ~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITE--GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp CEEEEECSSTTCCEEEEEE--CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred cEEEEeCCCcCCCceeeEE--CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 32 1222223344555555 556777777777889999998 4443221 111 000 111 24567
Q ss_pred EEEECcCCeeeee-ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEE
Q psy14961 161 NIWDMRTGYCVQS-FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFA 239 (320)
Q Consensus 161 ~iwd~~~~~~~~~-~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~ 239 (320)
..||. +++.... ...+...+.+++++++|..+++...++.|..||. +++.. .+........+..+.++++|.++++
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCCCCEEEe
Confidence 77777 5543322 3334456889999999997777777889999998 55432 2322212224568889999997776
Q ss_pred EeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961 240 GYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRD 290 (320)
Q Consensus 240 g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~ 290 (320)
...++.|..||.. +.... .+..+...+.++++ ++|++.++.+.++.+++
T Consensus 242 ~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 242 EWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKL 291 (299)
T ss_dssp ETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred ccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEE
Confidence 6678899999973 43222 12345567999999 99998887765555554
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=8.5e-14 Score=122.69 Aligned_cols=222 Identities=13% Similarity=0.014 Sum_probs=145.2
Q ss_pred CeEEEEecCCCCEEEEEeCC---CeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961 67 FISCCIFPNSDQQILTGSGD---CTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC 143 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~ 143 (320)
.+..+.|+++++.|+..... ..|.+||+.+++.......+........| +++|+.|+.++.++.|.+||+.+++.
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~--spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI--STDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE--CTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE--CCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 35667899999988776543 47888899887754433322222222444 56799999999999999999988765
Q ss_pred EEEeccCCcc------------------------c---------------cCCCeEEEEECcCCeeeeeecCCCCCeEEE
Q psy14961 144 VQSFEGHHNL------------------------I---------------TDDKLVNIWDMRTGYCVQSFEGHQSDVNSV 184 (320)
Q Consensus 144 ~~~~~~~~~~------------------------~---------------~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v 184 (320)
......+... . ..+..|.+||+.+++..... .+...+..+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~ 193 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHP 193 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccc
Confidence 4333211100 0 23457889999887655443 456678999
Q ss_pred EEcC-CCCEEEEeeCC------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCC
Q psy14961 185 KFHP-SGDAVATGSDD------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSL 252 (320)
Q Consensus 185 ~~~p-~g~~l~s~s~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~ 252 (320)
.|+| ++..|+.++.+ ..|.+||+..++...... ......+..+.|+|+|++|+.++.+ +.|.+||..
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 9999 78877666543 468888987654322222 1112235678999999988776543 459999987
Q ss_pred CCeEEEEeecCCCceeEEEECc-CCCeEEEec----------------CCCceEeeecch
Q psy14961 253 KCCRVNHLMGHENRVSCLQVSP-DGTAFSSGS----------------WDTTLRDEESKN 295 (320)
Q Consensus 253 ~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s----------------~D~~ir~~~~~~ 295 (320)
++.... +.... ... ++|+| ||++|+.++ .+..|.+|+...
T Consensus 273 ~g~~~~-l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 273 TLENEE-VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp TCCEEE-EEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred CCCeEE-eeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 764432 22122 233 89999 999988765 347788998643
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.63 E-value=1.1e-13 Score=119.55 Aligned_cols=239 Identities=9% Similarity=0.029 Sum_probs=159.1
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS 97 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 97 (320)
+...|.++.|++++..++..+.++.++.|.- .....+..+...+.++.|.++++.++++..++.|.+||.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~ 76 (333)
T 2dg1_A 4 SQQDLPTLFYSGKSNSAVPIISESELQTITA-------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK 76 (333)
T ss_dssp --CCCCBCCSCGGGGCSSCCCCGGGSCEEEC-------EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred cccccceeeecCCccceeEEeecccCccccc-------ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 3445778889999888887778888888832 112234445556788899988887778888999999999887
Q ss_pred ceeeecccCccceeEEEEeeCCCCCEEEEEeCC----CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961 98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD----KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 173 (320)
+.......+...+.++++ +++|+++++...+ +.|.+||..++.....+.
T Consensus 77 ~~~~~~~~~~~~~~~i~~--~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~------------------------- 129 (333)
T 2dg1_A 77 EIKRPFVSHKANPAAIKI--HKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE------------------------- 129 (333)
T ss_dssp CEEEEEECSSSSEEEEEE--CTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-------------------------
T ss_pred cEEEEeeCCCCCcceEEE--CCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-------------------------
Confidence 765433344566777766 5567777776665 578888876654221110
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEeeC------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE-eCCCeE
Q psy14961 174 FEGHQSDVNSVKFHPSGDAVATGSD------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTI 246 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v 246 (320)
...+...+..++++|+|+.+++... .+.|..+|..+++....... ...+..++|+|+|+.|+.+ +.++.|
T Consensus 130 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~~~~i 206 (333)
T 2dg1_A 130 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETTANRL 206 (333)
T ss_dssp SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCCCCeE
Confidence 0012346889999999988777654 35566666654433222111 1124678899999866544 567899
Q ss_pred EEEcCCC-CeEEE--------EeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 247 NVWDSLK-CCRVN--------HLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 247 ~~wd~~~-~~~~~--------~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.+||... +.... .+.++ ..+..|+++++|+++++...++.|++|+..
T Consensus 207 ~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 207 HRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred EEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 9999743 22111 11222 467899999999998888888999999864
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.61 E-value=1e-13 Score=131.83 Aligned_cols=237 Identities=13% Similarity=-0.038 Sum_probs=149.1
Q ss_pred ceEEEEEcCCCCEEE-----EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe-------
Q psy14961 21 WVMACAYAPSGSVVA-----SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT------- 88 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~-----s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~------- 88 (320)
.+.+++|||||++|| .|+.+..|++||+...... ....+... ....+.|+++++.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~--~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS--KVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC--SSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc--CCcccCcc--cccceEEecCCCEEEEEEecCCCCCcccc
Confidence 588999999999998 4455678999998643211 01111111 1156889999999999888776
Q ss_pred ------EEEEECCCcc----eeeecccCccceeEEEEeeCCCCCEEEEEeCCC----eEEEEeCCCCcEEEEeccCCccc
Q psy14961 89 ------CALWDVESSQ----LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK----LVNIWDMRTGYCVQSFEGHHNLI 154 (320)
Q Consensus 89 ------v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg----~i~lwd~~~~~~~~~~~~~~~~~ 154 (320)
|++|++.++. ++.....+...+..+.+ +++|+.|+.++.++ .|.+||..++..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~----------- 264 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL--SRDGKYLFVYILRGWSENDVYWKRPGEKDF----------- 264 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE--CTTSCCEEEEEEETTTEEEEEEECTTCSSC-----------
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE--CCCCCEEEEEEeCCCCceEEEEEcCCCCce-----------
Confidence 9999998765 33333334445555554 66788888776655 455554433221
Q ss_pred cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCCee---EeEEecCcceeeeEEE
Q psy14961 155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRADKE---VACYKKDSILFGATSV 228 (320)
Q Consensus 155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~ 228 (320)
..+..+...+....+ |+|..+++.. .++.|.+||+.+++. ........ ...+..+
T Consensus 265 -----------------~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~l~~~ 325 (695)
T 2bkl_A 265 -----------------RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS-SASLLSV 325 (695)
T ss_dssp -----------------EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS-SCEEEEE
T ss_pred -----------------EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC-CCeEEEE
Confidence 111223334445555 5566444443 368899999976642 22222211 1124566
Q ss_pred EEecCCcEEEEEeCCCeEEEEcCC-CCeEEEEeecC-CCceeEEEECcCCCeEE----EecCCCceEeeecc
Q psy14961 229 DFSVSGRLLFAGYNDYTINVWDSL-KCCRVNHLMGH-ENRVSCLQVSPDGTAFS----SGSWDTTLRDEESK 294 (320)
Q Consensus 229 ~~s~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~h-~~~i~~i~~s~~~~~l~----s~s~D~~ir~~~~~ 294 (320)
+++ ++.++++...++..++|... .+.....+..+ ...|..++++||++.|+ +...+++|..|+..
T Consensus 326 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 326 SIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 777 77888888899988887533 24444555544 66788999999998777 55567889999864
No 183
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=1.1e-12 Score=110.81 Aligned_cols=203 Identities=11% Similarity=0.144 Sum_probs=140.8
Q ss_pred ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeeccc------CccceeEEEEeeCCCCCEEEEEeC-CCeEEE
Q psy14961 63 THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHG------HTGELMDLDLAPSETGNTFVSGSS-DKLVNI 135 (320)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~s~~~-dg~i~l 135 (320)
++.....++.+.+++..+++...++.|.+||.+ ++.+..+.. +...+..+++. .++++.+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~-~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVV-RNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEE-TTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEE-cCCCeEEEEcCCCCCEEEE
Confidence 344567788898888877777889999999987 555544432 22345566553 234555555433 788888
Q ss_pred EeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961 136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC 215 (320)
Q Consensus 136 wd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~ 215 (320)
|| .++..+..+. ..+...+..++++|+|+.+++...++.|.+||.. ++.+..
T Consensus 105 ~d-~~g~~~~~~~--------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 156 (286)
T 1q7f_A 105 YN-QYGQFVRKFG--------------------------ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHK 156 (286)
T ss_dssp EC-TTSCEEEEEC--------------------------TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred EC-CCCcEEEEec--------------------------CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEE
Confidence 88 4444333221 0123457899999999988888888999999965 444444
Q ss_pred EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC--CCceeEEEECcCCCeEEEecCCC-ceEeee
Q psy14961 216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDT-TLRDEE 292 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~-~ir~~~ 292 (320)
+........+..++++|+|.++++...++.|.+||.. +..+..+..+ ...+..|+++|+|+++++...++ .|++|+
T Consensus 157 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 157 FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred eCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 4322222235789999999988888889999999974 4455555433 36789999999999999988886 999999
Q ss_pred cchH
Q psy14961 293 SKNR 296 (320)
Q Consensus 293 ~~~~ 296 (320)
....
T Consensus 236 ~~g~ 239 (286)
T 1q7f_A 236 QDGQ 239 (286)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 6543
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.60 E-value=1.1e-12 Score=113.19 Aligned_cols=253 Identities=9% Similarity=-0.007 Sum_probs=163.5
Q ss_pred eEeecccceeEEEEEe------CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecC
Q psy14961 2 IIWDGLTQTKEHSVTM------PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPN 75 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~------~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 75 (320)
.++|..+++....+.. -......+.++ ++++.++...++.|.++|.... ....++. .......+.+++
T Consensus 20 ~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~----~~~~~i~-~~~~p~~i~~~~ 93 (328)
T 3dsm_A 20 SYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF----KEVGRIT-GFTSPRYIHFLS 93 (328)
T ss_dssp EEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC----CEEEEEE-CCSSEEEEEEEE
T ss_pred EEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECccc----EEEEEcC-CCCCCcEEEEeC
Confidence 4677777665432210 01234667774 4455666667899999987532 2222232 234566777866
Q ss_pred CCCEEEEEe-CCCeEEEEECCCcceeeecccCc-----cceeEEEEeeCCCCCEEEEEe--CCCeEEEEeCCCCcEEEEe
Q psy14961 76 SDQQILTGS-GDCTCALWDVESSQLLQSFHGHT-----GELMDLDLAPSETGNTFVSGS--SDKLVNIWDMRTGYCVQSF 147 (320)
Q Consensus 76 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~s~~--~dg~i~lwd~~~~~~~~~~ 147 (320)
++ .++.+. .++.|.+||+.+++....+.... .....+++ ++..++.+. .++.|.++|+.+++.+..+
T Consensus 94 ~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~----~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 94 DE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ----YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp TT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE----ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred CC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE----ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 66 566665 78999999999988776655322 03344554 234555554 3778888888776654432
Q ss_pred ccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC----------CeEEEEECCCCeeEeEEe
Q psy14961 148 EGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD----------ATCRLFDLRADKEVACYK 217 (320)
Q Consensus 148 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d----------g~i~iwd~~~~~~~~~~~ 217 (320)
. . ......++++|+|+.++++..+ +.|.++|..+++....+.
T Consensus 169 ~---------------------------~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 169 T---------------------------I-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp E---------------------------C-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred E---------------------------c-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence 1 1 1123468889999877777655 789999998887655443
Q ss_pred cCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-Eeec-CCCceeEEEECc-CCCeEEEe----cCCCceEe
Q psy14961 218 KDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMG-HENRVSCLQVSP-DGTAFSSG----SWDTTLRD 290 (320)
Q Consensus 218 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~-h~~~i~~i~~s~-~~~~l~s~----s~D~~ir~ 290 (320)
.... ..+..++|+|+++.|+++.. .|.+||..+..... .+.. +.....+|+++| +++++++. ..+++|.+
T Consensus 221 ~~~g-~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v 297 (328)
T 3dsm_A 221 FKLG-DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR 297 (328)
T ss_dssp CCTT-CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE
T ss_pred cCCC-CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE
Confidence 2211 13578999999999888765 89999987665432 1222 245789999999 67777777 67899999
Q ss_pred eecchH
Q psy14961 291 EESKNR 296 (320)
Q Consensus 291 ~~~~~~ 296 (320)
|+....
T Consensus 298 ~d~~g~ 303 (328)
T 3dsm_A 298 YSPQGK 303 (328)
T ss_dssp ECTTCC
T ss_pred ECCCCC
Confidence 997644
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=5.6e-13 Score=115.56 Aligned_cols=243 Identities=9% Similarity=0.048 Sum_probs=146.1
Q ss_pred ccceEEEEEcCCCCEEEEec---------CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC---
Q psy14961 19 ATWVMACAYAPSGSVVASGG---------LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD--- 86 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~---------~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--- 86 (320)
...+...++ ||+.|+... .++.|.+|++.... ...+ ..+....|+|+++.|+..+.+
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l----~~~~~~~~SpDg~~la~~~~~~~~ 82 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA-----RRFI----ENATMPRISPDGKKIAFMRANEEK 82 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC-----EEEE----ESCEEEEECTTSSEEEEEEEETTT
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc-----eEEc----ccCCCeEECCCCCEEEEEEeccCC
Confidence 345677778 888887652 25567788764321 1122 457788999999998877653
Q ss_pred C--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEe----ccCCccccCCCeE
Q psy14961 87 C--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSF----EGHHNLITDDKLV 160 (320)
Q Consensus 87 g--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~----~~~~~~~~~d~~i 160 (320)
+ .|.+|++.+++.......+ . +..+.| +|+|+.|+.++.+.. +-.....+..+ .+..........|
T Consensus 83 ~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~w--spdg~~l~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~l 154 (347)
T 2gop_A 83 KVSEIWVADLETLSSKKILEAK-N-IRSLEW--NEDSRKLLIVGFKRR----EDEDFIFEDDVPAWFDDLGFFDGEKTTF 154 (347)
T ss_dssp TEEEEEEEETTTTEEEEEEEES-E-EEEEEE--CTTSSEEEEEEECCC----C---------CCCC---------CEEEE
T ss_pred CcceEEEEECCCCceEEEEcCC-C-ccceeE--CCCCCEEEEEEccCC----CcCCcEEEcccceeecCcccccCccceE
Confidence 3 4777788877665444332 3 666666 557888887764310 00000000000 0000000113467
Q ss_pred EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC-------eEEEEECCCCeeEeEEecCcceeeeEEEEEecC
Q psy14961 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA-------TCRLFDLRADKEVACYKKDSILFGATSVDFSVS 233 (320)
Q Consensus 161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~ 233 (320)
.+||+.+++.+..+.. . .+..++|+|+| .+++++.+. ...||.+++++....... ..... ++|+
T Consensus 155 ~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~----~~~~~--~spd 225 (347)
T 2gop_A 155 WIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK----VSFYA--VDSD 225 (347)
T ss_dssp EEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE----ESEEE--EEEC
T ss_pred EEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC----cceee--ECCC
Confidence 8888887766344433 3 67899999999 777776542 334444434443322222 11222 3999
Q ss_pred CcEEEEEeCC--------CeEEEEcCCCCeEEEEeecCCCceeE-EEECcCCCeEEEecCCCceEeeecc
Q psy14961 234 GRLLFAGYND--------YTINVWDSLKCCRVNHLMGHENRVSC-LQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 234 ~~~l~~g~~d--------g~v~~wd~~~~~~~~~~~~h~~~i~~-i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
|++|+.++.+ ..|.+|| ++.......+|...+.. ++|+ |+ ++++++.|+.+++| ..
T Consensus 226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 9988887743 4788888 44433333456778886 9999 98 99999999999999 65
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=9.8e-13 Score=113.60 Aligned_cols=221 Identities=8% Similarity=0.064 Sum_probs=146.9
Q ss_pred CeEeecccceeEEEEE-eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccc---------cccccCeEE
Q psy14961 1 MIIWDGLTQTKEHSVT-MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTV---------ATHTSFISC 70 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~-~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~---------~~h~~~v~~ 70 (320)
|.+||..+++...... .+......++++|+|+++++...++.|++|+.+.... ....+ ..+......
T Consensus 71 i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~---~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 71 ILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEG---PLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp EEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSC---CSEEESBTTBCCCSTTCCSSEEE
T ss_pred EEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeE---EEEEecccCCCCCCccccCCCcE
Confidence 3578877776654332 1224578999999999999988899999998643210 11111 233445778
Q ss_pred EEecC-CCCEEEEEe-CCCeEEEEECCCcceeeecccCc----------cceeEEEEeeCCC-CCEEEEEeCCCeEEEEe
Q psy14961 71 CIFPN-SDQQILTGS-GDCTCALWDVESSQLLQSFHGHT----------GELMDLDLAPSET-GNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 71 ~~~~~-~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~-~~~l~s~~~dg~i~lwd 137 (320)
+.+.+ ++..+++.+ .++.|++|+. ++..+..+.... .....+++. ++ +..+++...++.|++||
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d--~~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALV--PHLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEE--TTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEE--CCCCEEEEEECCCCEEEEEE
Confidence 99988 666666665 5899999994 566555553221 225566664 44 56666777788899999
Q ss_pred CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC------CCCEEEEeeCCCeEEEEECCCCe
Q psy14961 138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP------SGDAVATGSDDATCRLFDLRADK 211 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p------~g~~l~s~s~dg~i~iwd~~~~~ 211 (320)
..+++.+..+.. ..+...+..++++| +|+.+++.+.+..+++||+.+++
T Consensus 225 ~~~G~~~~~~~~-------------------------~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 225 TDTKEFVREIKH-------------------------ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp TTTCCEEEEECC-------------------------TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC
T ss_pred CCCCcEEEEEec-------------------------cccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe
Confidence 877765554321 12444567788888 34433334455689999999888
Q ss_pred eEeEEecC-cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961 212 EVACYKKD-SILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252 (320)
Q Consensus 212 ~~~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~ 252 (320)
.+..+... .....+..++++|+|.++++...++.|.+|+..
T Consensus 280 ~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 280 IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 77665321 122335789999999888888889999999853
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=9.8e-12 Score=106.05 Aligned_cols=243 Identities=12% Similarity=0.117 Sum_probs=150.1
Q ss_pred cceEEEEEcCCCCEEEE-------ecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961 20 TWVMACAYAPSGSVVAS-------GGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALW 92 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s-------~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 92 (320)
....+++|+++|.++++ +..++.|.+|+...............++...+..+.+.+++..++.++..+.|.+|
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~ 97 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEE
Confidence 45578999999988888 67788999997532211100000001244567788888873455555555589999
Q ss_pred ECCCcceeee-ccc----CccceeEEEEeeCCCCCEEEEEeCC---------------CeEEEEeCCCCcEEEEeccCCc
Q psy14961 93 DVESSQLLQS-FHG----HTGELMDLDLAPSETGNTFVSGSSD---------------KLVNIWDMRTGYCVQSFEGHHN 152 (320)
Q Consensus 93 d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~l~s~~~d---------------g~i~lwd~~~~~~~~~~~~~~~ 152 (320)
|.+ ++.... ... ....+..+++ +++|+..++...+ +.|..+|.. ++
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~--d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~---------- 163 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAF--DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ---------- 163 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEE--CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----------
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEE--CCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----------
Confidence 988 654332 211 1123555655 5567766665443 234334332 21
Q ss_pred cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc----CCCCEE-EEeeCCCeEEEEECC-CCeeE--eEEec-Ccce-
Q psy14961 153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH----PSGDAV-ATGSDDATCRLFDLR-ADKEV--ACYKK-DSIL- 222 (320)
Q Consensus 153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~----p~g~~l-~s~s~dg~i~iwd~~-~~~~~--~~~~~-~~~~- 222 (320)
... +..+......++++ |+++.+ ++...++.|.+||+. .++.. ..+.. ....
T Consensus 164 -----------------~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 164 -----------------MIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp -----------------EEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred -----------------EEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC
Confidence 111 11122345789999 999765 444568899999976 34321 11111 1000
Q ss_pred eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEecCCCceEeeecc
Q psy14961 223 FGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESK 294 (320)
Q Consensus 223 ~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~ 294 (320)
..+..++++++|.++++...++.|..||..++..+..+..+...+.+++|+|+++ ++++...++.|..++..
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 2346788999999888888889999999875655555666667899999999999 55666667788888754
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=1.8e-12 Score=109.16 Aligned_cols=220 Identities=12% Similarity=0.056 Sum_probs=156.7
Q ss_pred CCCCEEEEecCCCeEEEEEecccCCcccccccccccc-cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCc
Q psy14961 29 PSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-SFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHT 107 (320)
Q Consensus 29 ~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 107 (320)
..+++|++++.++.|.+||... .....++..+. ..+.++.+.++++.++ +.++.|..||. +++.+..+..+.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~t----G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDT----KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTT----TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCT
T ss_pred CCCcEEEeeCCCCEEEEEECCC----CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCC
Confidence 3457899999999999998632 22233344443 3567788889998777 45788999999 788888887542
Q ss_pred -cceeEEEEeeCCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEE
Q psy14961 108 -GELMDLDLAPSETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVK 185 (320)
Q Consensus 108 -~~v~~~~~~~~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~ 185 (320)
..+.++. +.++|+.+++.+. ++.+..+|. .|+.+..+. +..+ ..++......++
T Consensus 76 ~~~~~~~~--~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~----------------~~~~-----~~~~~~~~~~v~ 131 (276)
T 3no2_A 76 GCEMQTAR--ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTE----------------FETG-----IERPHAQFRQIN 131 (276)
T ss_dssp TCEEEEEE--ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEE----------------ECCS-----CSSGGGSCSCCE
T ss_pred CccccccE--ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEe----------------ccCC-----CCcccccccCce
Confidence 3454444 4678999998877 777777775 555544432 1110 011112334567
Q ss_pred EcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC-
Q psy14961 186 FHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE- 264 (320)
Q Consensus 186 ~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~- 264 (320)
+.++|+++++...++.|..||.. ++.+..+..... +..+.+.++|.+++++..++.|..+|..+++.+-++..+.
T Consensus 132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~---~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGT---PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSC---CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGS
T ss_pred ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCC---ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCC
Confidence 88999999999999999999988 877766655422 2356678999999999988899999998888877775432
Q ss_pred -----CceeEEEECcCCCeEEEec
Q psy14961 265 -----NRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 265 -----~~i~~i~~s~~~~~l~s~s 283 (320)
..+..++..++|.++++.+
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCccccccccceEcCCCCEEEEec
Confidence 2378999999999998873
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=2.2e-11 Score=112.46 Aligned_cols=287 Identities=15% Similarity=0.131 Sum_probs=183.4
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEec----CCC
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFP----NSD 77 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~ 77 (320)
.++|..+++....+... ..+..+.|+|||+++++++.|+.|.+||+.... .....++... ..-..+.|+ +++
T Consensus 180 ~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t--~~~v~~i~~G-~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 180 ALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE--PTTVAEIKIG-SEARSIETSKMEGWED 255 (567)
T ss_dssp EEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSS--CCEEEEEECC-SEEEEEEECCSTTCTT
T ss_pred EEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCC--CcEeEEEecC-CCCceeEEccccCCCC
Confidence 47888888877766643 456789999999999999999999999973111 1122223222 223567888 589
Q ss_pred CEEEEEeC-CCeEEEEECCCcceeeecccCc----------c-ceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE-
Q psy14961 78 QQILTGSG-DCTCALWDVESSQLLQSFHGHT----------G-ELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV- 144 (320)
Q Consensus 78 ~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~----------~-~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~- 144 (320)
+++++++. +++|.++|..+.+++..+.... . .+..+..++. ...+++....+|.|.+.|......+
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~-~~~~vv~~~~~g~v~~vd~~~~~~~~ 334 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY-RPEFIVNVKETGKILLVDYTDLNNLK 334 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS-SSEEEEEETTTTEEEEEETTCSSEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC-CCEEEEEecCCCeEEEEecCCCccce
Confidence 98887765 5999999999988877654211 1 3444443322 2345556667799999998654321
Q ss_pred -EE-----------eccCCc--cc--cCCCeEEEEECcCCeeeeeecC-----CCCCeEEEEEcCCCCEE-EEee-CCCe
Q psy14961 145 -QS-----------FEGHHN--LI--TDDKLVNIWDMRTGYCVQSFEG-----HQSDVNSVKFHPSGDAV-ATGS-DDAT 201 (320)
Q Consensus 145 -~~-----------~~~~~~--~~--~~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~v~~~p~g~~l-~s~s-~dg~ 201 (320)
.. ++.... .+ ..++.|.++|..+++.+..+.- |...-..+ ++|++..+ ++.. .++.
T Consensus 335 v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~ 413 (567)
T 1qks_A 335 TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDS 413 (567)
T ss_dssp EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE
T ss_pred eeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCe
Confidence 11 111111 11 2457799999999887665543 33222222 68875544 4543 4689
Q ss_pred EEEEECCC-------CeeEeEEecCcceeeeEEEEEecCCcEEEEEeC-------CCeEEEEcCCCC-----eEE-EEee
Q psy14961 202 CRLFDLRA-------DKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-------DYTINVWDSLKC-----CRV-NHLM 261 (320)
Q Consensus 202 i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-------dg~v~~wd~~~~-----~~~-~~~~ 261 (320)
|.++|..+ .+.+....... .+..-+.++|++++|.+... ..+|.++|..+. ... ..+.
T Consensus 414 Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~ 491 (567)
T 1qks_A 414 VALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLP 491 (567)
T ss_dssp EEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEEC
T ss_pred EEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEec
Confidence 99999887 34444443321 11234678999999988763 358999997655 211 2221
Q ss_pred --------cCCCceeEEEECcCCCeEEEecC-----CCceEeeecchH
Q psy14961 262 --------GHENRVSCLQVSPDGTAFSSGSW-----DTTLRDEESKNR 296 (320)
Q Consensus 262 --------~h~~~i~~i~~s~~~~~l~s~s~-----D~~ir~~~~~~~ 296 (320)
.-...+..+.|+|+|+.+..+-+ ++.|.+.|.++.
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 492 IAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp HHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred cccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 12347899999999998666533 789999997543
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.55 E-value=2.6e-11 Score=111.97 Aligned_cols=263 Identities=8% Similarity=-0.018 Sum_probs=173.0
Q ss_pred EcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC--Ccceeeecc
Q psy14961 27 YAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE--SSQLLQSFH 104 (320)
Q Consensus 27 ~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~ 104 (320)
.++.+.++++...++.|.++|.... .....+.. ......+.++++++++++++.|+.|.+||+. +++.+..+.
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~----~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY----EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC----CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC----eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 3455667778888999999997532 12222322 2234578899999999999999999999995 777777666
Q ss_pred cCccceeEEEEee--CCCCCEEEEEeC-CCeEEEEeCCCCcEEEEeccCC----------c--------------c---c
Q psy14961 105 GHTGELMDLDLAP--SETGNTFVSGSS-DKLVNIWDMRTGYCVQSFEGHH----------N--------------L---I 154 (320)
Q Consensus 105 ~~~~~v~~~~~~~--~~~~~~l~s~~~-dg~i~lwd~~~~~~~~~~~~~~----------~--------------~---~ 154 (320)
... ....+++++ .++|+++++++. ++.+.++|..+.+.+..+.... . . +
T Consensus 238 ~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 238 IGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp CCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred cCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 433 334565541 147888887665 5899999999888776653210 0 0 1
Q ss_pred cCCCeEEEEECcCCee--eeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeEeEEec-CcceeeeEEE-E
Q psy14961 155 TDDKLVNIWDMRTGYC--VQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEVACYKK-DSILFGATSV-D 229 (320)
Q Consensus 155 ~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~-~ 229 (320)
.+.+.|.++|..+... +..+ ........+.|+|+|+++++++ .++.|.++|+.+++.+..... .........+ .
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~ 395 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF 395 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred cCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence 2346777777765421 1222 1233466889999999886554 678999999999887665543 2211100111 2
Q ss_pred EecCCc-EEEEEe-CCCeEEEEcCCC-------CeEEEEeecCCCceeEEEECcCCCeEEEecC-------CCceEeeec
Q psy14961 230 FSVSGR-LLFAGY-NDYTINVWDSLK-------CCRVNHLMGHENRVSCLQVSPDGTAFSSGSW-------DTTLRDEES 293 (320)
Q Consensus 230 ~s~~~~-~l~~g~-~dg~v~~wd~~~-------~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~-------D~~ir~~~~ 293 (320)
++|++. .++++. .+++|.++|... .+.+.++......-..|+.+||+++|..... ..+|.++|.
T Consensus 396 ~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence 688755 445553 468999999876 5566777655444356889999998877552 358899987
Q ss_pred chH
Q psy14961 294 KNR 296 (320)
Q Consensus 294 ~~~ 296 (320)
.+.
T Consensus 476 ~~~ 478 (567)
T 1qks_A 476 KAM 478 (567)
T ss_dssp GGC
T ss_pred Ccc
Confidence 543
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.55 E-value=5.9e-11 Score=104.20 Aligned_cols=259 Identities=10% Similarity=-0.058 Sum_probs=168.1
Q ss_pred EEcCCCCEEEEecC--CC---eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEE
Q psy14961 26 AYAPSGSVVASGGL--DN---KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCA 90 (320)
Q Consensus 26 ~~~~~~~~l~s~~~--dg---~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~ 90 (320)
...|++.+++.+.. .. .|.+||.... .....+..-..+ .+.+++++++++.+. .++.|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~----~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSG----SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCC----eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence 34578887777653 22 7788887432 122233322222 788999999999886 367899
Q ss_pred EEECCCcceeeecccC-------ccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEE-eccCC---------
Q psy14961 91 LWDVESSQLLQSFHGH-------TGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQS-FEGHH--------- 151 (320)
Q Consensus 91 iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~-~~~~~--------- 151 (320)
+||+.+.+.+..+... ...-..+. .+++|++|+.++. ++.|.++| .+++.+.. +.-..
T Consensus 101 viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~--~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~ 177 (373)
T 2mad_H 101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNA--NTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAP 177 (373)
T ss_pred EEECCCCcEEEEEECCCccccccCCCccceE--ECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCC
Confidence 9999988777655422 01122344 4678999998874 47899999 99988776 53211
Q ss_pred ---ccccCCCeEEEEECcCCeeeeeec-----CCCCC-eEEEEEcCCCCEEEEeeCCCeEEEEECCCCee--EeEEecCc
Q psy14961 152 ---NLITDDKLVNIWDMRTGYCVQSFE-----GHQSD-VNSVKFHPSGDAVATGSDDATCRLFDLRADKE--VACYKKDS 220 (320)
Q Consensus 152 ---~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~-v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~ 220 (320)
...+.++.+.++|. +++...... ....+ .....+.+++..++..+.++.+.+.|+..... ...+....
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence 12346788888888 766553221 11112 13356677766655555778999999865432 11111100
Q ss_pred --------ceeeeEEEEEecCCcEEEEEeC----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEE
Q psy14961 221 --------ILFGATSVDFSVSGRLLFAGYN----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSS 281 (320)
Q Consensus 221 --------~~~~~~~~~~s~~~~~l~~g~~----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s 281 (320)
...+...+.++|+++.++++.. ++.|.+.|..+.+.+.++. -.....+++|+|||+ +|++
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v 335 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYA 335 (373)
T ss_pred CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEE
Confidence 0112234778999998887653 3579999999988887774 233578999999999 7888
Q ss_pred ec-CCCceEeeecch
Q psy14961 282 GS-WDTTLRDEESKN 295 (320)
Q Consensus 282 ~s-~D~~ir~~~~~~ 295 (320)
+. .++++.++|.+.
T Consensus 336 ~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 336 LSAGTEVLHIYDAGA 350 (373)
T ss_pred EcCCCCeEEEEECCC
Confidence 77 489999999754
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=8.9e-11 Score=103.05 Aligned_cols=245 Identities=10% Similarity=-0.031 Sum_probs=158.3
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccc--c---ccc
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVA--T---HTS 66 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~--~---h~~ 66 (320)
.++|..+.+....+..... ..++|+|||++|+.+. .++.|.+||....... ... .+. . +..
T Consensus 50 ~v~D~~t~~~~~~i~~g~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~-~~i-~~~~~~~~~~g~ 125 (373)
T 2mad_H 50 WVLDAGSGSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI-ADI-ELPDAPRFDVGP 125 (373)
T ss_pred EEEECCCCeEEEEecCCCC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE-EEE-ECCCccccccCC
Confidence 5788888777655443323 3899999999998885 3678999987421110 100 011 0 011
Q ss_pred CeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeee-cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961 67 FISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQS-FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC 143 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~ 143 (320)
.-..+.+++++++|++++. ++.|.++| .+++.+.. +... + ++.+.+.. ...+++.+.||.+.++|. +++.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~-~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGA-PSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCC-CceEEEEcCCCCEEEEEC-CCcE
Confidence 2346789999999998874 57899999 99988776 5432 1 13333332 246677788999999999 7765
Q ss_pred EEEec------c---------------CCccccCCCeEEEEECcCCe--eeeeecC----------CCCCeEEEEEcCCC
Q psy14961 144 VQSFE------G---------------HHNLITDDKLVNIWDMRTGY--CVQSFEG----------HQSDVNSVKFHPSG 190 (320)
Q Consensus 144 ~~~~~------~---------------~~~~~~~d~~i~iwd~~~~~--~~~~~~~----------~~~~v~~v~~~p~g 190 (320)
..... + ....++..+.+.+.|+.... .+..+.- .......++++|++
T Consensus 199 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~ 278 (373)
T 2mad_H 199 AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS 278 (373)
T ss_pred EEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCC
Confidence 52211 0 00111234567777775432 1122210 11223447899999
Q ss_pred CEEEEeeC----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEEE
Q psy14961 191 DAVATGSD----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRVN 258 (320)
Q Consensus 191 ~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~~ 258 (320)
+.++.+.. ++.|.++|+.+.+.+..++... ....+.|+|||+ .++++. .++.|.++|+.+.+.+.
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 88776543 3589999999988877665432 246789999999 777776 58999999999888887
Q ss_pred Ee
Q psy14961 259 HL 260 (320)
Q Consensus 259 ~~ 260 (320)
+.
T Consensus 356 ~i 357 (373)
T 2mad_H 356 ST 357 (373)
T ss_pred ee
Confidence 64
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.54 E-value=2.3e-10 Score=96.53 Aligned_cols=260 Identities=8% Similarity=0.049 Sum_probs=165.0
Q ss_pred ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961 19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ 98 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (320)
.....+++++++|++.++...++.|.+|+.. ... . ...+..+...+..+.+.+++..+++...++.|..+|.. ++
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~--~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI--K-EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE--E-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce--E-EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 4577899999999988888778999999764 111 1 11122233567788888888766666667899999987 54
Q ss_pred eee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-eccC------------Cc-ccc--CCCeEE
Q psy14961 99 LLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS-FEGH------------HN-LIT--DDKLVN 161 (320)
Q Consensus 99 ~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~-~~~~------------~~-~~~--~d~~i~ 161 (320)
... ........+..+++ .++|+.+++...++.|..+|.. +..... +... .. .+. ..+.|.
T Consensus 94 ~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITE--GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp EEEEECSSTTCCEEEEEE--CSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred eEEecCCCCCCCCccceE--CCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 432 22222344555655 4567777777668889999987 543321 1110 00 111 145677
Q ss_pred EEECcCCeeee-eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961 162 IWDMRTGYCVQ-SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240 (320)
Q Consensus 162 iwd~~~~~~~~-~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 240 (320)
.+|. +++... ....+...+..++++++|..+++...++.|..+|. .++... +........+..++++++|.+.++.
T Consensus 171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCCCCCceEEEECCCCCEEEec
Confidence 7776 443322 22234456889999999987777777788999998 343322 2211112235678899999977776
Q ss_pred eCCCeEEEEcCCCCeEE-EEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 241 YNDYTINVWDSLKCCRV-NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 241 ~~dg~v~~wd~~~~~~~-~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
..++.|..||.. +... ..+......+.+|+++++|+++++.. . .|..++
T Consensus 248 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 248 WGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp TTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred cCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 667899999974 3332 22233456789999999999877665 4 554444
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=5.3e-12 Score=106.26 Aligned_cols=185 Identities=9% Similarity=0.083 Sum_probs=137.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCcceeeecccCc-cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccc
Q psy14961 76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHT-GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLI 154 (320)
Q Consensus 76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~ 154 (320)
.++.|++++.|+.|.+||.++++.+..+..+. ..+.++.+ .++|+.++ +.++.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~--~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~----- 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA--TKAGEILF--SYSKGAKMITR-DGRELWNIAA----- 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE--CTTSCEEE--ECBSEEEEECT-TSCEEEEEEC-----
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE--CCCCCEEE--eCCCCEEEECC-CCCEEEEEcC-----
Confidence 46789999999999999999999998887665 35666665 45788777 44677888887 6665444321
Q ss_pred cCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCc----ceeeeEEEE
Q psy14961 155 TDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDS----ILFGATSVD 229 (320)
Q Consensus 155 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~ 229 (320)
+....+.++.+.|+|+++++.+. ++.+..+|. .++.+..+.... .......++
T Consensus 74 ---------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 74 ---------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp ---------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred ---------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCce
Confidence 11234678899999999999887 778888885 566554443211 111223456
Q ss_pred EecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 230 FSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 230 ~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
+.++|.++++.+.++.|..||.. ++.+-++..+ ..+.++.+.++|+++++++.+++|..++..
T Consensus 132 ~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 132 KNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred ECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 78999999999999999999987 7777766654 456678889999999999988888877754
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.51 E-value=6.2e-12 Score=119.81 Aligned_cols=247 Identities=10% Similarity=0.014 Sum_probs=146.7
Q ss_pred CCCCEEEEecCCC---eEEEEEecccCCccccc---ccc-cccccCeEEEEecCCCCEEEEEeCCC-----eEEEEECCC
Q psy14961 29 PSGSVVASGGLDN---KVTVYAIALEDDSSAKK---KTV-ATHTSFISCCIFPNSDQQILTGSGDC-----TCALWDVES 96 (320)
Q Consensus 29 ~~~~~l~s~~~dg---~i~v~~~~~~~~~~~~~---~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~ 96 (320)
|+|++++....++ .-.+|..+......... ..+ ..|...+....|++++++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7888777654332 12455543221111110 111 12334577889999999988665433 899999999
Q ss_pred cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe----eee
Q psy14961 97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY----CVQ 172 (320)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~----~~~ 172 (320)
++.+..... ...+..++| ++||+.|+.++.++. .+. ..+..........|++|++.++. .+.
T Consensus 161 g~~~~~~~~-~~~~~~~~w--spDg~~l~~~~~~~~-------~~~----~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~ 226 (710)
T 2xdw_A 161 AKELPDVLE-RVKFSCMAW--THDGKGMFYNAYPQQ-------DGK----SDGTETSTNLHQKLYYHVLGTDQSEDILCA 226 (710)
T ss_dssp TEEEEEEEE-EECSCCEEE--CTTSSEEEEEECCCC-------SSC----CSSSCCCCCCCCEEEEEETTSCGGGCEEEE
T ss_pred CCCCccccc-CcccceEEE--EeCCCEEEEEEECCc-------ccc----ccccccccCCCCEEEEEECCCCcccceEEe
Confidence 887653221 222445666 557888988877654 000 00000000112345555555443 222
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEeeC-----CCeEEEEECCC------Ce-eEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961 173 SFEGHQSDVNSVKFHPSGDAVATGSD-----DATCRLFDLRA------DK-EVACYKKDSILFGATSVDFSVSGRLLFAG 240 (320)
Q Consensus 173 ~~~~~~~~v~~v~~~p~g~~l~s~s~-----dg~i~iwd~~~------~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 240 (320)
....|...+..++|+|+|++|+..+. +..|.+||+.+ +. ....+..... . ....|+|+|..|+..
T Consensus 227 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~--~-~~~~~s~dg~~l~~~ 303 (710)
T 2xdw_A 227 EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE--G-EYDYVTNEGTVFTFK 303 (710)
T ss_dssp CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS--S-CEEEEEEETTEEEEE
T ss_pred ccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC--c-EEEEEeccCCEEEEE
Confidence 22335556789999999999877654 67899999875 32 2222222211 1 123488999988776
Q ss_pred eCC----CeEEEEcCCCCe--EEEEeecCCC--ceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 241 YND----YTINVWDSLKCC--RVNHLMGHEN--RVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 241 ~~d----g~v~~wd~~~~~--~~~~~~~h~~--~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
++. +.|.+||..+.. ....+.+|.. .+..++|++++.+++++..|+..++|.
T Consensus 304 s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 304 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred ECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 653 469999987653 1244566654 688999998888999999998765543
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=3.7e-12 Score=121.06 Aligned_cols=241 Identities=9% Similarity=-0.045 Sum_probs=143.8
Q ss_pred cCCCCEEEEecCCC---eEEEEEecccCCcccccc---c-ccccccCeEEEEecCCCCEEE-----EEeCCCeEEEEECC
Q psy14961 28 APSGSVVASGGLDN---KVTVYAIALEDDSSAKKK---T-VATHTSFISCCIFPNSDQQIL-----TGSGDCTCALWDVE 95 (320)
Q Consensus 28 ~~~~~~l~s~~~dg---~i~v~~~~~~~~~~~~~~---~-~~~h~~~v~~~~~~~~~~~l~-----s~~~dg~v~iwd~~ 95 (320)
+|+|.+++....++ .-.+|..+.......... . -..|...+....|+|++++|+ .|+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37888887766544 345565432211111111 1 123445688899999999988 34445789999999
Q ss_pred Cccee-eecccCccce--eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe---
Q psy14961 96 SSQLL-QSFHGHTGEL--MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY--- 169 (320)
Q Consensus 96 ~~~~~-~~~~~~~~~v--~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--- 169 (320)
+++.+ .. +...+ ..++| +++|+.|+.++.|.. ..+ ..........|++|++.++.
T Consensus 156 tg~~~~~~---~~~~~~~~~~~w--spDg~~l~~~~~d~~------~~~--------~~~~~~~~~~v~~~~l~t~~~~~ 216 (695)
T 2bkl_A 156 SGEWSKVD---VIEGGKYATPKW--TPDSKGFYYEWLPTD------PSI--------KVDERPGYTTIRYHTLGTEPSKD 216 (695)
T ss_dssp TCCBCSSC---CBSCCTTCCCEE--CTTSSEEEEEECCCC------TTS--------CGGGGGGGCEEEEEETTSCGGGC
T ss_pred CCCCcCCc---ccCcccccceEE--ecCCCEEEEEEecCC------CCC--------ccccCCCCCEEEEEECCCCchhc
Confidence 98765 21 11122 34555 567889998887654 000 00000011234444443332
Q ss_pred -eeeeecCCCCCeEEEEEcCCCCEEEEeeCCC----eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC--
Q psy14961 170 -CVQSFEGHQSDVNSVKFHPSGDAVATGSDDA----TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN-- 242 (320)
Q Consensus 170 -~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~-- 242 (320)
++.....|...+.++.|+|+|++|+..+.++ .|.+++..+++.......... .....+ ++|. ++..++
T Consensus 217 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~---~~~~~~-~~g~-l~~~s~~~ 291 (695)
T 2bkl_A 217 TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA---KYEVHA-WKDR-FYVLTDEG 291 (695)
T ss_dssp EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC---CEEEEE-ETTE-EEEEECTT
T ss_pred eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc---eEEEEe-cCCc-EEEEECCC
Confidence 2333344556788999999999988777665 677777655443332222221 223334 6777 555443
Q ss_pred --CCeEEEEcCCCCeE--EEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 243 --DYTINVWDSLKCCR--VNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 243 --dg~v~~wd~~~~~~--~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
++.|.+||..++.. ...+..| ...|..++|+ ++.++++...|++.++|..
T Consensus 292 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 292 APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 58899999866532 2344444 4568889998 7889999999999998864
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=1.1e-10 Score=103.89 Aligned_cols=240 Identities=12% Similarity=0.099 Sum_probs=155.5
Q ss_pred ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCC--eEEEEECCCcc
Q psy14961 21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC--TCALWDVESSQ 98 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~ 98 (320)
....++|+++++++++...++.|++||..... ...+........ +.+.++++.|+++..++ .|.+++...+.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-----~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-----VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTE-----EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCE-----EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 46789999999988887778999999874211 111111112223 78889999999888766 78888877654
Q ss_pred eeeec----ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961 99 LLQSF----HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF 174 (320)
Q Consensus 99 ~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 174 (320)
....+ ........++++.+ ++..|+.+..++.|..||..++... .+.+.. .
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p--~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~----------------------~ 260 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDE--TEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLE----------------------L 260 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECT--TSSEEEEECTTCEEEEEETTTCCEE-EEEECC----------------------C
T ss_pred eeEEeeeccchhcCCcEEEEEeC--CCCeEEEEECCCcEEEEECCCCCEE-EEeccc----------------------c
Confidence 33332 11334456666644 2345666777888999998765421 110000 0
Q ss_pred cCCCC--CeEEEEEcCC-CCEEEEeeCCCeEEEEECCCCeeEeEEecC------------cceeeeEEEEEecCCcEEEE
Q psy14961 175 EGHQS--DVNSVKFHPS-GDAVATGSDDATCRLFDLRADKEVACYKKD------------SILFGATSVDFSVSGRLLFA 239 (320)
Q Consensus 175 ~~~~~--~v~~v~~~p~-g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------------~~~~~~~~~~~s~~~~~l~~ 239 (320)
.++.. +...++|+|+ +..+++-..++.|+.|+....... ..... .....+..++++|+|.++++
T Consensus 261 ~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~-~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 261 SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEW-FCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEE-EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEE-EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 01111 1138999995 555566677889999997754221 11111 00123578999999998777
Q ss_pred Ee-CCCeEEEEcCCCCeEEEEeecC---------------CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 240 GY-NDYTINVWDSLKCCRVNHLMGH---------------ENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 240 g~-~dg~v~~wd~~~~~~~~~~~~h---------------~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
-+ .++.|+.|+...+. +.++.++ -.....|+++|+|.++++-..+..||....
T Consensus 340 d~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 77 88999999966654 4445544 245899999999999999999999987764
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.46 E-value=2.8e-11 Score=102.64 Aligned_cols=199 Identities=12% Similarity=0.099 Sum_probs=134.0
Q ss_pred ccccCeEEEEecCCCC-EEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC
Q psy14961 63 THTSFISCCIFPNSDQ-QILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG 141 (320)
Q Consensus 63 ~h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~ 141 (320)
.+.....++.|.++++ .++++..++.|..|+..++ ...+..+...+.++++ +++|+++++...++.|.+||..++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~--~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCL--NKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEE--CTTCCEEEEETTTTEEEEECSTTC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeE--CCCCcEEEEecCCCeEEEEcCCCC
Confidence 3445567888998888 6777888999999999877 4555555666766665 557887777777789999998776
Q ss_pred cEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEE----ee-------------CCCeEEE
Q psy14961 142 YCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVAT----GS-------------DDATCRL 204 (320)
Q Consensus 142 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s----~s-------------~dg~i~i 204 (320)
+........ .+ .....++.++++|+|+.+++ ++ ..+.|..
T Consensus 101 ~~~~~~~~~----------------~~-------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 101 EWESIADSF----------------EG-------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp CEEEEECEE----------------TT-------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred cEEEEeecc----------------CC-------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEE
Confidence 543221100 00 01124567999999998887 33 1345656
Q ss_pred EECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-CCeE---EEEeecCCCceeEEEECcCCCeEE
Q psy14961 205 FDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-KCCR---VNHLMGHENRVSCLQVSPDGTAFS 280 (320)
Q Consensus 205 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-~~~~---~~~~~~h~~~i~~i~~s~~~~~l~ 280 (320)
++.. ++. ...... ...+..++|+|+|+.|++.+.++.|.+||.. .+.. ...+..+...+.+|+++++|++++
T Consensus 158 ~~~~-g~~-~~~~~~--~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v 233 (296)
T 3e5z_A 158 LAPD-GTL-SAPIRD--RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWA 233 (296)
T ss_dssp ECTT-SCE-EEEECC--CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEE
T ss_pred ECCC-CCE-EEeecC--CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEE
Confidence 6554 332 222221 1234678999999988777788999999975 3332 222333455678999999999877
Q ss_pred EecCCCceEeeecc
Q psy14961 281 SGSWDTTLRDEESK 294 (320)
Q Consensus 281 s~s~D~~ir~~~~~ 294 (320)
+. ++.|++|+..
T Consensus 234 ~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 234 SA--GDGVHVLTPD 245 (296)
T ss_dssp EE--TTEEEEECTT
T ss_pred Ec--CCeEEEECCC
Confidence 76 7889999864
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.46 E-value=4.9e-11 Score=104.02 Aligned_cols=261 Identities=12% Similarity=0.011 Sum_probs=170.9
Q ss_pred EEEEcCCCCEEEEecC-----CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCe
Q psy14961 24 ACAYAPSGSVVASGGL-----DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCT 88 (320)
Q Consensus 24 ~~~~~~~~~~l~s~~~-----dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~ 88 (320)
.....|++..+..... ++.+.++|.... ....++..-..+ .+.++++++++++++ .++.
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~----~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG----RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTT----EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCC----eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCE
Confidence 3456799998887755 678888886421 222333322233 388999999988775 3678
Q ss_pred EEEEECCCcceeeecccCc-------cceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccC---------
Q psy14961 89 CALWDVESSQLLQSFHGHT-------GELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGH--------- 150 (320)
Q Consensus 89 v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~--------- 150 (320)
|.+||..+++.+..+.... ..-..+.+ +++|++++.++. ++.|.++|+.+++.+.++.-.
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~--spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g 188 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL--TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTA 188 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEE
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEE--cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCC
Confidence 9999999998887764321 12333555 667999988864 689999999999887776421
Q ss_pred -C--ccccCCCeEEEEECcC-CeeeeeecCC----CCCeE-EEEEc-CCCCEEEEeeCCCeEEEEECCCCee--EeEEe-
Q psy14961 151 -H--NLITDDKLVNIWDMRT-GYCVQSFEGH----QSDVN-SVKFH-PSGDAVATGSDDATCRLFDLRADKE--VACYK- 217 (320)
Q Consensus 151 -~--~~~~~d~~i~iwd~~~-~~~~~~~~~~----~~~v~-~v~~~-p~g~~l~s~s~dg~i~iwd~~~~~~--~~~~~- 217 (320)
. ..++.|+.+.+.++.+ ++.......+ ..++. ...|. ++|+.++ .+.+|++.+.|+.+... ...+.
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceec
Confidence 1 1346788888888876 4432211111 12222 24664 6775444 55689999999976532 21111
Q ss_pred -------cCcceeeeEEEEEecCCcEEEEEeC----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eE
Q psy14961 218 -------KDSILFGATSVDFSVSGRLLFAGYN----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AF 279 (320)
Q Consensus 218 -------~~~~~~~~~~~~~s~~~~~l~~g~~----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l 279 (320)
......+...++++|+++.|+.... ...|.+.|+.+.+.+.++.- ...+++|+|+||++ +|
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLL 346 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEE
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEE
Confidence 0001112234778999998887653 25799999999888877642 23688999999997 55
Q ss_pred EE-ecCCCceEeeecc
Q psy14961 280 SS-GSWDTTLRDEESK 294 (320)
Q Consensus 280 ~s-~s~D~~ir~~~~~ 294 (320)
++ ...++++-+.|.+
T Consensus 347 y~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAE 362 (386)
T ss_dssp EEEETTTTEEEEEETT
T ss_pred EEEcCCCCeEEEEECC
Confidence 55 5568999999964
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.46 E-value=2.8e-11 Score=115.84 Aligned_cols=237 Identities=15% Similarity=-0.005 Sum_probs=144.1
Q ss_pred ceEEEEEcCCCCEEEEecCC-----CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCe-------
Q psy14961 21 WVMACAYAPSGSVVASGGLD-----NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCT------- 88 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~d-----g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~------- 88 (320)
.+.+.+|||||++|+.++.+ ..|++||+...+. . ....+...+..+.|+++ +.|+.++.|+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~----~-~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP----L-ADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE----E-EEEEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC----C-CccCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 57789999999999887653 3588998753221 1 11111122346789999 88888776654
Q ss_pred -------EEEEECCCcc----eeeecccCccceeEEEEeeCCCCCEEEEEeCCC-----eEEEEeCCCCcEEEEeccCCc
Q psy14961 89 -------CALWDVESSQ----LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK-----LVNIWDMRTGYCVQSFEGHHN 152 (320)
Q Consensus 89 -------v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-----~i~lwd~~~~~~~~~~~~~~~ 152 (320)
|++|++.++. ++.....+...+..+.+ +++|++|+..+.++ .|.+||+.++..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~--------- 306 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASV--SSDGRWVVITSSEGTDPVNTVHVARVTNGKI--------- 306 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE--CTTSCEEEEEEECTTCSCCEEEEEEEETTEE---------
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEE--CCCCCEEEEEEEccCCCcceEEEEECCCCCC---------
Confidence 8899987765 22222222223444544 67888888776543 555555543310
Q ss_pred cccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC----CCeEEEEECCCC--eeEeEEecCcceeeeE
Q psy14961 153 LITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD----DATCRLFDLRAD--KEVACYKKDSILFGAT 226 (320)
Q Consensus 153 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~----dg~i~iwd~~~~--~~~~~~~~~~~~~~~~ 226 (320)
.+...+..+...+... ++|+|+.|+..+. ++.|.+||+.++ ........... .+.
T Consensus 307 ----------------~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~--~l~ 367 (741)
T 1yr2_A 307 ----------------GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD--NLE 367 (741)
T ss_dssp ----------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS--EEE
T ss_pred ----------------cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC--eEE
Confidence 1012222333333334 3488888877765 456999998874 22222322222 234
Q ss_pred EEEEecCCcEEEEEeCCCeEEEEcCC-CCeEEEEeec-CCCceeEEEECcCCCeEE----EecCCCceEeeecc
Q psy14961 227 SVDFSVSGRLLFAGYNDYTINVWDSL-KCCRVNHLMG-HENRVSCLQVSPDGTAFS----SGSWDTTLRDEESK 294 (320)
Q Consensus 227 ~~~~s~~~~~l~~g~~dg~v~~wd~~-~~~~~~~~~~-h~~~i~~i~~s~~~~~l~----s~s~D~~ir~~~~~ 294 (320)
.+.++ ++.++++...++..++|... .+.....+.. +...|..++++||++.|+ +....++|..|+..
T Consensus 368 ~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 368 SVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 55666 56778888889987777432 3444444543 467789999999988766 45567889999854
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.43 E-value=9.9e-10 Score=92.59 Aligned_cols=224 Identities=7% Similarity=0.027 Sum_probs=146.7
Q ss_pred cccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961 64 HTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY 142 (320)
Q Consensus 64 h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~ 142 (320)
+...+.++.+.+++..+++...++.|..||.. ++... ........+..+++ +++|...++...++.|..||.....
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTI--SSDGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEE--CTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEE--CCCCCEEEeCCCCCeEEEECCCCcE
Confidence 34567888888888776666567899999988 54432 12223345666655 5578777777768889999976321
Q ss_pred EEEEeccC------------Cc-ccc--CCCeEEEEECcCCeeee-eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy14961 143 CVQSFEGH------------HN-LIT--DDKLVNIWDMRTGYCVQ-SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206 (320)
Q Consensus 143 ~~~~~~~~------------~~-~~~--~d~~i~iwd~~~~~~~~-~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd 206 (320)
....+... .. .+. .++.|..||. ++.... ....+...+..++++|+|..+++...++.|..+|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 11111100 00 111 2456777777 443322 2233445689999999998888777788999999
Q ss_pred CCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEecCC
Q psy14961 207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGSWD 285 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s~D 285 (320)
. +++... +........+..++++++|.++++...++.|..||. ++.... ....+...+.+|+++++|+++++...+
T Consensus 169 ~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 169 E-SGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp T-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred C-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 8 554332 222111223567889999997777767889999998 544332 223355678999999999988887778
Q ss_pred CceEeeecc
Q psy14961 286 TTLRDEESK 294 (320)
Q Consensus 286 ~~ir~~~~~ 294 (320)
+.|..++..
T Consensus 246 ~~i~~~d~~ 254 (299)
T 2z2n_A 246 NKIGRLTSN 254 (299)
T ss_dssp TEEEEEETT
T ss_pred ceEEEECCC
Confidence 889988863
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.43 E-value=1.8e-10 Score=100.51 Aligned_cols=259 Identities=15% Similarity=0.121 Sum_probs=165.1
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccccc-------
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVATH------- 64 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~h------- 64 (320)
.+-|..+.+....+.....+ . ++++|||++++.++ .++.|.+||..... ...++...
T Consensus 62 ~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~----v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 62 FVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL----PTADIELPDAPRFLV 135 (386)
T ss_dssp EEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEEEEEETTCCCCCB
T ss_pred EEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe----EEEEEECCCcccccc
Confidence 35577777877776655554 4 99999999887765 36789999875321 11122110
Q ss_pred ccCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-C
Q psy14961 65 TSFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT-G 141 (320)
Q Consensus 65 ~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~-~ 141 (320)
...-..+.+++++++++++.. ++.|.++|+.+++.+..+.... . ..+.|. ....+++.+.||.+.+.++.. +
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~--~~~~P~-g~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C--YHIFPT-APDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEE-ETTEEEEEETTSCEEEEECCSSS
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c--ceeecC-CCceeEEECCCCCEEEEECCCCC
Confidence 112345788999999998874 6899999999999888775322 1 112222 235666777888888888765 4
Q ss_pred cEEEEec--------------------cCCccccCCCeEEEEECcCCe--eeeeec---------C-CCCCeEEEEEcCC
Q psy14961 142 YCVQSFE--------------------GHHNLITDDKLVNIWDMRTGY--CVQSFE---------G-HQSDVNSVKFHPS 189 (320)
Q Consensus 142 ~~~~~~~--------------------~~~~~~~~d~~i~iwd~~~~~--~~~~~~---------~-~~~~v~~v~~~p~ 189 (320)
+...... ++...++.++.+.+.|+.... ....+. + .......++++|+
T Consensus 211 ~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~ 290 (386)
T 3sjl_D 211 TPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA 290 (386)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred eEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence 4322110 001123445677888876543 222221 0 1122335788999
Q ss_pred CCEEEEeeC----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEE
Q psy14961 190 GDAVATGSD----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRV 257 (320)
Q Consensus 190 g~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~ 257 (320)
++.++.... .++|.+.|+.+.+.+..+.... .+.++.|++|++ +|++.. .+++|.++|..+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC---CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 988876542 3579999999998877665432 346899999997 666654 5899999999999888
Q ss_pred EEeecCCCceeEEEECcC
Q psy14961 258 NHLMGHENRVSCLQVSPD 275 (320)
Q Consensus 258 ~~~~~h~~~i~~i~~s~~ 275 (320)
.++..-. .-+.|.+++|
T Consensus 368 ~~i~~~~-~p~~l~~s~d 384 (386)
T 3sjl_D 368 RSVNQLG-HGPQVITTAD 384 (386)
T ss_dssp EEECCCC-SSCCEEEECC
T ss_pred EEecCCC-CCceeEECCc
Confidence 7765322 2234555555
No 203
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=1.2e-10 Score=101.16 Aligned_cols=262 Identities=11% Similarity=0.072 Sum_probs=154.8
Q ss_pred cceEEEEEcCCCCEEEEec--CCCeEEEEEecccCCccccc----ccccccccCeEEEEecCCCCEEEEEeC-----CCe
Q psy14961 20 TWVMACAYAPSGSVVASGG--LDNKVTVYAIALEDDSSAKK----KTVATHTSFISCCIFPNSDQQILTGSG-----DCT 88 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~--~dg~i~v~~~~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~l~s~~~-----dg~ 88 (320)
.....++++++|+++++.. .++.++||.++ .. ..... .....|...+..+.+.+++..+++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 5778999999999888864 23436666664 11 11100 111234567888999887654444333 578
Q ss_pred EEEEECCCcceeeecccC------ccceeEEEEeeCCCCCEEEEEe---CCCeEEEEeCCCCcEEEEeccCCcccc----
Q psy14961 89 CALWDVESSQLLQSFHGH------TGELMDLDLAPSETGNTFVSGS---SDKLVNIWDMRTGYCVQSFEGHHNLIT---- 155 (320)
Q Consensus 89 v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~s~~---~dg~i~lwd~~~~~~~~~~~~~~~~~~---- 155 (320)
|.+||+.+++.+..+... ......+++.+. ++..+++-. .++.|.+||+.+++..+.+.+|.....
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~-~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLI-HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETT-TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecC-CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 999999988866555321 223466666542 233344444 578999999998887766654322111
Q ss_pred --CCCe-EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC-eEEEEECC---CCe----e----EeEEecCc
Q psy14961 156 --DDKL-VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA-TCRLFDLR---ADK----E----VACYKKDS 220 (320)
Q Consensus 156 --~d~~-i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg-~i~iwd~~---~~~----~----~~~~~~~~ 220 (320)
.++. +...+. .+.. .. ....++.|+|+|+|+.|+.+..++ .+..++.. .+. . +......
T Consensus 174 ~~~~g~~~~~~~~-~g~~-~~---~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 247 (343)
T 2qe8_A 174 LVIDGVPVQIGQP-DGTV-IR---PHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK- 247 (343)
T ss_dssp CEETTEECBEECT-TSCE-EC---CCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC-
T ss_pred eeECCEEEEeccC-CCce-ec---eecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC-
Confidence 1111 110110 0100 00 112468899999999888877665 44444421 110 0 0000000
Q ss_pred ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee-cCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 221 ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 221 ~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.....++++++|.++++...++.|..||...+....... .+...+.+++|.++++++++.+....+.++.
T Consensus 248 --g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 248 --PICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp --CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred --CCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 023457899999999998899999999984444322222 2245689999999999988887665554443
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=9.5e-12 Score=108.88 Aligned_cols=180 Identities=18% Similarity=0.123 Sum_probs=127.2
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCC-----cc-cccccccccccCeEEEEecCCCCEEEEEeCCCeEEE
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDD-----SS-AKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCAL 91 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~-----~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 91 (320)
+...++.+++++...++++|+.++ +.+|++..-.. .. ........+.. |..+.| ++..|+++ .++.|++
T Consensus 36 ~~~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 36 PFASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CSSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred CcccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 444688999999999999999875 66798642110 00 01111223455 999999 78888888 8899999
Q ss_pred EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961 92 WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV 171 (320)
Q Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 171 (320)
||+.+.......+.|..++.++.+.+ ..+++++.||.|.+||+..+....
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~----p~~av~~~dG~L~v~dl~~~~~~~-------------------------- 160 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVN----NTLVILNSVNDLSALDLRTKSTKQ-------------------------- 160 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECS----SEEEEEETTSEEEEEETTTCCEEE--------------------------
T ss_pred EEchhhhccCccceeecceeeEEecC----CCEEEEECCCCEEEEEccCCcccc--------------------------
Confidence 99977655555556677777665432 238889999999999998664321
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee--EeEEecC-------cceeeeEEEEEecCCcEEEE
Q psy14961 172 QSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE--VACYKKD-------SILFGATSVDFSVSGRLLFA 239 (320)
Q Consensus 172 ~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~-------~~~~~~~~~~~s~~~~~l~~ 239 (320)
+...|.|++|||+| ++.|..||++++|+....+. ...+... .....+.++.|.+++.++++
T Consensus 161 -----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 -----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp -----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred -----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 22368999999999 77899999999998877653 3334211 01245788999999988876
No 205
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.42 E-value=1.9e-10 Score=99.25 Aligned_cols=231 Identities=7% Similarity=-0.048 Sum_probs=139.8
Q ss_pred CeEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc-----cCeEEEEecC
Q psy14961 1 MIIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT-----SFISCCIFPN 75 (320)
Q Consensus 1 ~~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~ 75 (320)
|.+||..+.+....+.. ......+++++++++.++...++.|.+||..... ....+.... .....+.+
T Consensus 66 v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~----~~~~i~~g~~~~~~~~p~~i~~-- 138 (328)
T 3dsm_A 66 IFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE----ITGYIECPDMDMESGSTEQMVQ-- 138 (328)
T ss_dssp EEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE----EEEEEECTTCCTTTCBCCCEEE--
T ss_pred EEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe----EEEEEEcCCccccCCCcceEEE--
Confidence 35788888887766643 3456789999998655555478999999875321 111111111 12233444
Q ss_pred CCCEEEEEe--CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC----------CeEEEEeCCCCcE
Q psy14961 76 SDQQILTGS--GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD----------KLVNIWDMRTGYC 143 (320)
Q Consensus 76 ~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d----------g~i~lwd~~~~~~ 143 (320)
+++.++.++ .++.|.++|+.+++.+..+.... ....+.+ +++|++++++..+ +.|.++|..+++.
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~--~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v 215 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVM--DKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV 215 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEE--CTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEE--cCCCCEEEEECCCccCCccccCCceEEEEECCCCeE
Confidence 355666665 48899999999988777665322 2334444 4567655555433 4566666555443
Q ss_pred EEEeccCCccccCCCeEEEEECcCCeeeeeecCC-CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce
Q psy14961 144 VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH-QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL 222 (320)
Q Consensus 144 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 222 (320)
...+.-. ......++++|+++.|+.+.. .|.+||..+++...........
T Consensus 216 ---------------------------~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~ 266 (328)
T 3dsm_A 216 ---------------------------EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRD 266 (328)
T ss_dssp ---------------------------EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCS
T ss_pred ---------------------------EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCC
Confidence 2222211 125688999999998887765 8999999876642110000001
Q ss_pred eeeEEEEEec-CCcEEEEE----eCCCeEEEEcCCCCeEEEEeecCCCceeEEEE
Q psy14961 223 FGATSVDFSV-SGRLLFAG----YNDYTINVWDSLKCCRVNHLMGHENRVSCLQV 272 (320)
Q Consensus 223 ~~~~~~~~s~-~~~~l~~g----~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~ 272 (320)
..+..++++| ++.+.++. ..++.|.+||.. ++.+.++.. ...-..++|
T Consensus 267 ~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 267 TKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp SCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred CceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence 2356789999 55565665 568899999987 766666542 222345555
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.41 E-value=1.3e-10 Score=102.96 Aligned_cols=259 Identities=10% Similarity=-0.011 Sum_probs=168.6
Q ss_pred CCCCEEEEecCC-----CeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEEEEE
Q psy14961 29 PSGSVVASGGLD-----NKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCALWD 93 (320)
Q Consensus 29 ~~~~~l~s~~~d-----g~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd 93 (320)
++++.++..... +.|.++|.... ....++..-..+ .+.++++++.++++. .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~----~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG----RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT----EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC----EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 466655555432 68999987532 222233222233 688999999988876 467999999
Q ss_pred CCCcceeeecccC-------ccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCC------------c
Q psy14961 94 VESSQLLQSFHGH-------TGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHH------------N 152 (320)
Q Consensus 94 ~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~------------~ 152 (320)
..+++.+..+... ......+.+ +++|++++.+.. ++.|.+.|+.+++.+..+.-.. .
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~--spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v 233 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNAL--TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFY 233 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEE--cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEE
Confidence 9999887766421 112233444 668999998874 5789999999998877664311 1
Q ss_pred cccCCCeEEEEECcCCeeeee----ecCCCCCe-EEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEe--EEec---Cc--
Q psy14961 153 LITDDKLVNIWDMRTGYCVQS----FEGHQSDV-NSVKFHPSGDAVATGSDDATCRLFDLRADKEVA--CYKK---DS-- 220 (320)
Q Consensus 153 ~~~~d~~i~iwd~~~~~~~~~----~~~~~~~v-~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~--~~~~---~~-- 220 (320)
..+.++.+.+.+..+++.... +.....++ ..+.+.+++..++..+..+.+.+.|........ .+.. ..
T Consensus 234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 234677777777755543321 11111121 245789998888777788999999986543211 1110 00
Q ss_pred ---ceeeeEEEEEecCCcEEEEEeC----------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEec-CC
Q psy14961 221 ---ILFGATSVDFSVSGRLLFAGYN----------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGS-WD 285 (320)
Q Consensus 221 ---~~~~~~~~~~s~~~~~l~~g~~----------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s-~D 285 (320)
...+...++++|+++.+++... ++.|.+.|..+.+.+.++... ....+|+|+|||+ +++++. .+
T Consensus 314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTT
T ss_pred cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCC
Confidence 0111123689999987777642 357999999998888777522 2478999999999 888777 59
Q ss_pred CceEeeecchH
Q psy14961 286 TTLRDEESKNR 296 (320)
Q Consensus 286 ~~ir~~~~~~~ 296 (320)
+++.+.|....
T Consensus 393 ~~VsVID~~t~ 403 (426)
T 3c75_H 393 QTLHIYDAATG 403 (426)
T ss_dssp TEEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 99999997543
No 207
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=1.2e-10 Score=97.03 Aligned_cols=198 Identities=10% Similarity=0.042 Sum_probs=130.8
Q ss_pred cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961 20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ 98 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (320)
..+.+++++++|+++++.. ++.|.+|+...... ..+. ........+.+.+++..+++...++.|.+|+..+..
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-----TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT 140 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-----EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-----eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce
Confidence 4567899999999777666 88899997642211 1111 222456788888888766666678899999865544
Q ss_pred eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC
Q psy14961 99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ 178 (320)
Q Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 178 (320)
..............+++ +++|+.+++...++.|.+||......... ...+.
T Consensus 141 ~~~~~~~~~~~p~~i~~--~~~g~l~v~~~~~~~i~~~~~~~~~~~~~---------------------------~~~~~ 191 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAV--DNSGNVYVTDTDNNRVVKLEAESNNQVVL---------------------------PFTDI 191 (270)
T ss_dssp CEECCCCSCCSCCCEEE--CTTCCEEEEEGGGTEEEEECTTTCCEEEC---------------------------CCSSC
T ss_pred eEeeccccCCCceeEEE--eCCCCEEEEECCCCEEEEEecCCCceEee---------------------------cccCC
Confidence 33222222234555665 45677666666678899998765432110 01122
Q ss_pred CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 179 SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 179 ~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
..+.+++++|+|..+++...++.|.+||........ .... ....+..++++++|+++++...++.|.+++....
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFT-GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCC-SCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccC-CCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 457889999999877887788999999987543322 1111 1123578899999998888888999999987543
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=1.1e-10 Score=111.84 Aligned_cols=244 Identities=10% Similarity=0.013 Sum_probs=142.6
Q ss_pred cCCCCEEEEecCCCe---EEEEEeccc---CCccccc---ccc-cccccCeEEEEecCCCCEEEEEeCC-----CeEEEE
Q psy14961 28 APSGSVVASGGLDNK---VTVYAIALE---DDSSAKK---KTV-ATHTSFISCCIFPNSDQQILTGSGD-----CTCALW 92 (320)
Q Consensus 28 ~~~~~~l~s~~~dg~---i~v~~~~~~---~~~~~~~---~~~-~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iw 92 (320)
+|+|++++....++. -.+|..+.. ....... ..+ ..|...+....|+|++++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 389998887665443 556665432 1111110 011 1233467788999999998876543 469999
Q ss_pred ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCe---
Q psy14961 93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGY--- 169 (320)
Q Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--- 169 (320)
|+.+++.+.. ..+...+..++| +++ +.|+.++.++... .+. . ........|++|++.++.
T Consensus 195 dl~tg~~~~~-~~~~~~~~~~~w--spD-~~l~~~~~~~~~~-----~~~----~----~~~~~~~~v~~~~lgt~~~~~ 257 (741)
T 1yr2_A 195 GVADGKPLAD-ELKWVKFSGLAW--LGN-DALLYSRFAEPKE-----GQA----F----QALNYNQTVWLHRLGTPQSAD 257 (741)
T ss_dssp ETTTCCEEEE-EEEEEESCCCEE--STT-SEEEEEECCCC---------------------CCCCCEEEEEETTSCGGGC
T ss_pred ECCCCCCCCc-cCCCceeccEEE--ECC-CEEEEEEecCccc-----ccc----c----ccCCCCCEEEEEECCCCchhC
Confidence 9999887543 111112234555 556 7788777665310 000 0 000112345566654433
Q ss_pred -eeeeecCCCCCeEEEEEcCCCCEEEEeeCC-----CeEEEEECCCC--e-eEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961 170 -CVQSFEGHQSDVNSVKFHPSGDAVATGSDD-----ATCRLFDLRAD--K-EVACYKKDSILFGATSVDFSVSGRLLFAG 240 (320)
Q Consensus 170 -~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d-----g~i~iwd~~~~--~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 240 (320)
.+.....+...+.++.|+|+|++|+..+.+ ..|.+||+.++ + .......... .... ++|+|..|+..
T Consensus 258 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~-~~~dg~~l~~~ 333 (741)
T 1yr2_A 258 QPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA---QWDF-VDGVGDQLWFV 333 (741)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS---CEEE-EEEETTEEEEE
T ss_pred EEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc---eEEE-EeccCCEEEEE
Confidence 222233344458899999999998877644 38999999776 3 2222222211 1222 45899988887
Q ss_pred eC----CCeEEEEcCCCC-eEEEEee-cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 241 YN----DYTINVWDSLKC-CRVNHLM-GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 241 ~~----dg~v~~wd~~~~-~~~~~~~-~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
++ ++.|.+||.... .....+. .+...+..++|+ ++.++++...|+..++|..
T Consensus 334 s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 334 SGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp ECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred ECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 75 456999998764 2333343 445567788887 6778999999999888764
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.39 E-value=1.8e-09 Score=91.68 Aligned_cols=236 Identities=9% Similarity=0.001 Sum_probs=139.3
Q ss_pred ceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcce
Q psy14961 21 WVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQL 99 (320)
Q Consensus 21 ~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 99 (320)
.--+..|+++ +.++++...++.|..|+...... . .......+.++.+.+++++++ +. ++.|.+||.++++.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-----~-~~~~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-----Q-RVTMDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-----E-EEECSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-----E-EEeCCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcE
Confidence 3346788985 45666667788999998743211 1 112345688899999888444 44 56899999987764
Q ss_pred eeecccC----ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 100 LQSFHGH----TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 100 ~~~~~~~----~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
....... ...+..+.+ +++|++.++...+... . .......+.+..++.. +... .+.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~--d~dG~l~~~~~~~~~~----~------------~~~~~~~~~l~~~d~~-g~~~-~~~ 145 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKV--DPAGRYFAGTMAEETA----P------------AVLERHQGALYSLFPD-HHVK-KYF 145 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEE--CTTSCEEEEEEECCSB----T------------TBCCTTCEEEEEECTT-SCEE-EEE
T ss_pred EEEEecCCCCCCCCCCCEEE--CCCCCEEEecCCcccc----c------------ccccCCCcEEEEEECC-CCEE-EEe
Confidence 3222111 122344444 5677755543221100 0 0000001111111111 1111 111
Q ss_pred CCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECC--CCeeE--eEEec-CcceeeeEEEEEecCCcEEEEEeCCCeEEEE
Q psy14961 176 GHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLR--ADKEV--ACYKK-DSILFGATSVDFSVSGRLLFAGYNDYTINVW 249 (320)
Q Consensus 176 ~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~--~~~~~--~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~w 249 (320)
.+....+.++|+|+++.| ++.+.++.|..||+. ++... ..+.. ......+..++++++|.+.++....+.|..|
T Consensus 146 ~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 146 DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRL 225 (297)
T ss_dssp EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEE
T ss_pred eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEE
Confidence 122345789999999876 455668899999874 44321 11111 1111234678899999988888888999999
Q ss_pred cCCCCeEEEEeecCCCceeEEEEC-cCCCeEEEecC
Q psy14961 250 DSLKCCRVNHLMGHENRVSCLQVS-PDGTAFSSGSW 284 (320)
Q Consensus 250 d~~~~~~~~~~~~h~~~i~~i~~s-~~~~~l~s~s~ 284 (320)
|..+++.+..+..+...+++++|. ||++.|..++.
T Consensus 226 d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 226 DPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred cCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 988788888787777789999998 88876655554
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=3.5e-11 Score=105.29 Aligned_cols=170 Identities=11% Similarity=0.047 Sum_probs=122.8
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcc-----------eeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEE
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQ-----------LLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNI 135 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~l 135 (320)
.+..+++++....+++|+.+ .+.+|++...+ ..... .+.. |..++| +++.|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f----d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF----HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE----ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE----CCCEEEEE-cCCcEEE
Confidence 57788888888999999987 56669865432 11112 2445 887877 57888888 8899999
Q ss_pred EeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeE
Q psy14961 136 WDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVAC 215 (320)
Q Consensus 136 wd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~ 215 (320)
||+.+...... ...|..++.++.+.+. .++++..||.+.+||+..+....
T Consensus 111 ~dv~sl~~~~~---------------------------~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~- 160 (388)
T 1xip_A 111 LDLEELSEFRT---------------------------VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ- 160 (388)
T ss_dssp EESSSTTCEEE---------------------------EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-
T ss_pred EEchhhhccCc---------------------------cceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-
Confidence 99876432211 1223445666666543 38889999999999998766532
Q ss_pred EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeE--EEEe------e---cCCCceeEEEECcCCCeEEE
Q psy14961 216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCR--VNHL------M---GHENRVSCLQVSPDGTAFSS 281 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~--~~~~------~---~h~~~i~~i~~s~~~~~l~s 281 (320)
....+++++|||+| ++.|..||++++|+...... ..++ . +|...|.+|.|.+++.+|++
T Consensus 161 -----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 -----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp -----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred -----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 12357899999999 67899999999998665543 4444 2 47889999999999998887
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=1.1e-09 Score=93.21 Aligned_cols=244 Identities=12% Similarity=0.039 Sum_probs=141.9
Q ss_pred EEeCccceEEEEEcCCCC-EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961 15 VTMPATWVMACAYAPSGS-VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93 (320)
Q Consensus 15 ~~~~~~~V~~~~~~~~~~-~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 93 (320)
+.....+.....|+|+|+ ++++...++.|..|+.. .. ...+..+...+..+.+.++++.+++...++.|..|+
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~--g~----~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED--GT----VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT--SC----EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC--CC----EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 333445667889999998 66777778899999752 11 123334456678889998887665555568899999
Q ss_pred CCCcceeeecccCc----cceeEEEEeeCCCCCEEEE----EeCCCeEEEEeCCCCcEEEEeccCCc-cccCCCeEEEEE
Q psy14961 94 VESSQLLQSFHGHT----GELMDLDLAPSETGNTFVS----GSSDKLVNIWDMRTGYCVQSFEGHHN-LITDDKLVNIWD 164 (320)
Q Consensus 94 ~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~s----~~~dg~i~lwd~~~~~~~~~~~~~~~-~~~~d~~i~iwd 164 (320)
.+ ++......... ..+..+.+ +++|+..++ |..+. ..+... .....+.|..+|
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~--d~dG~l~~td~~~g~~~~---------------~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIV--ARDGAIWFTDPPFGLRKP---------------SQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEE--CTTSCEEEECCSGGGSCG---------------GGSCCCCCSSSCEEEEEEC
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEE--CCCCCEEEeCcCCCcccc---------------ccccccccccCCCeEEEEc
Confidence 76 44322111101 12233443 445665554 22110 000000 000122344444
Q ss_pred CcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC------CeEEEEECCCCeeEeE---EecCcceeeeEEEEEecCCc
Q psy14961 165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD------ATCRLFDLRADKEVAC---YKKDSILFGATSVDFSVSGR 235 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d------g~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~s~~~~ 235 (320)
..+++..... .....+.++|+|+++.|+.+... +.|..|++..+. +.. +... ....+..+.++++|+
T Consensus 176 ~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~-~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 176 PDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV-PDGLPDGFCVDRGGW 251 (305)
T ss_dssp SSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC-SSSCCCSEEECTTSC
T ss_pred CCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC-CCCCCCeEEECCCCC
Confidence 4443322221 22346789999999987766554 789999987654 211 1110 011124577899999
Q ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961 236 LLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRD 290 (320)
Q Consensus 236 ~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~ 290 (320)
+.++ ..+ .|.+|+. .+..+..+..+. .+.+++|+|+++.|..++.++..++
T Consensus 252 lwv~-~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 252 LWSS-SGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEEC-CSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEEe-cCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 5444 444 4999997 455555555444 5899999999988888877776554
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.32 E-value=6.3e-10 Score=98.68 Aligned_cols=245 Identities=13% Similarity=0.084 Sum_probs=157.0
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCcccccccccc-------c
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVAT-------H 64 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~-------h 64 (320)
.+.|..+.+....+.....+ .++++|||++|+.+. .++.|.++|..... ...++.. .
T Consensus 102 sVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~----vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 102 FVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL----PIADIELPDAPRFLV 175 (426)
T ss_dssp EEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC----EEEEEEETTCCCCCB
T ss_pred EEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc----EEEEEECCCcccccc
Confidence 36678888888777766666 899999999888776 36789999874321 1111110 0
Q ss_pred ccCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961 65 TSFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY 142 (320)
Q Consensus 65 ~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~ 142 (320)
...-..+.+++++++++++.. ++.|.+.|+.+++.+..+..... ..+.|.. ...+++.+.||.+.+.++.+++
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g-~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPAS-PTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEE-TTEEEEEETTSSEEEEECCTTC
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCC-CcEEEEEcCCCCEEEEECCCCc
Confidence 111234678999999999875 57999999999988877663221 1222221 2455666677777766765444
Q ss_pred EEEE----ec-------------cC--C-ccccCCCeEEEEECcCCeee--eeecC----------CCCCeEEEEEcCCC
Q psy14961 143 CVQS----FE-------------GH--H-NLITDDKLVNIWDMRTGYCV--QSFEG----------HQSDVNSVKFHPSG 190 (320)
Q Consensus 143 ~~~~----~~-------------~~--~-~~~~~d~~i~iwd~~~~~~~--~~~~~----------~~~~v~~v~~~p~g 190 (320)
.... +. .. . ..+...+.+.+.|+...... ..+.- .......++++|++
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg 330 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS 330 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC
Confidence 3321 10 00 0 01123466777777543211 11100 01112237899998
Q ss_pred CEEEEeeC----------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEEE
Q psy14961 191 DAVATGSD----------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRVN 258 (320)
Q Consensus 191 ~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~~ 258 (320)
+.++.... ++.|.++|..+.+.+..++-.. ....+.|+|||+ ++++.. .++.|.++|+.+.+.+.
T Consensus 331 ~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 331 DRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 87766532 3579999999998877664332 356889999999 888887 58999999999998887
Q ss_pred Ee
Q psy14961 259 HL 260 (320)
Q Consensus 259 ~~ 260 (320)
++
T Consensus 408 tI 409 (426)
T 3c75_H 408 SV 409 (426)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.31 E-value=1.5e-08 Score=85.27 Aligned_cols=223 Identities=9% Similarity=0.042 Sum_probs=144.6
Q ss_pred ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceee-ecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE
Q psy14961 65 TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC 143 (320)
Q Consensus 65 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~ 143 (320)
.....++.+.+++..+++...++.|.+||.. ++... .+......+..+++ +++|+..++...++.|..+|.. +..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIV--SSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEE--CCCCCEEEEecCCCeEEEECCC-CCe
Confidence 3456788888888777766678999999987 54432 22222244555554 5667777776667889999987 543
Q ss_pred EE-EeccCC------------c-ccc--CCCeEEEEECcCCeee-eeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEE
Q psy14961 144 VQ-SFEGHH------------N-LIT--DDKLVNIWDMRTGYCV-QSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFD 206 (320)
Q Consensus 144 ~~-~~~~~~------------~-~~~--~d~~i~iwd~~~~~~~-~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd 206 (320)
.. ...... . .+. .++.|..+|.. ++.. ..+......+..++++|+|+.+++...++.|..+|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 21 111000 0 011 14566677765 4333 22333445688999999999777777788999999
Q ss_pred CCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcCCCeEEEecCC
Q psy14961 207 LRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPDGTAFSSGSWD 285 (320)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~~~~l~s~s~D 285 (320)
. .++... +........+..+.++++|.+.++....+.|..||. .+.... .+..+...+.+|+++++|+++++...+
T Consensus 174 ~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 174 N-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp T-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred C-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 8 444332 322211223567889999987777767788999997 333332 233345678999999999988887777
Q ss_pred CceEeeecch
Q psy14961 286 TTLRDEESKN 295 (320)
Q Consensus 286 ~~ir~~~~~~ 295 (320)
+.|..++...
T Consensus 251 ~~i~~~~~~g 260 (300)
T 2qc5_A 251 NQIGRITNDN 260 (300)
T ss_dssp TEEEEECTTS
T ss_pred CeEEEECCCC
Confidence 8898888643
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.31 E-value=1.1e-08 Score=88.05 Aligned_cols=222 Identities=14% Similarity=0.105 Sum_probs=133.9
Q ss_pred eEEEEEcCCC-CEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCccee
Q psy14961 22 VMACAYAPSG-SVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLL 100 (320)
Q Consensus 22 V~~~~~~~~~-~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 100 (320)
.-+..|+|++ .++++...++.|..|+..... ...+ .....+.++.+.+++.++++ +.+ .|.+||..+++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~-----~~~~-~~~~~v~~i~~~~dg~l~v~-~~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR-----KTVH-ALPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE-----EEEE-ECSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc-----EEEE-ECCCcceEEEEeCCCeEEEE-ECC-CEEEEECCCCcEE
Confidence 4577899975 456666677889999864211 1111 12356888888888766554 444 4999998877653
Q ss_pred eeccc---C-ccceeEEEEeeCCCCCEEEEEeCC------CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961 101 QSFHG---H-TGELMDLDLAPSETGNTFVSGSSD------KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC 170 (320)
Q Consensus 101 ~~~~~---~-~~~v~~~~~~~~~~~~~l~s~~~d------g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 170 (320)
..... . ...+..+.+ +++|+++++...+ +.|..+| +++ .
T Consensus 123 ~~~~~~~~~~~~~~~~i~~--d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~---------------------------~ 171 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRM--HPSGALWIGTMGRKAETGAGSIYHVA--KGK---------------------------V 171 (326)
T ss_dssp EEECSSTTCTTEEEEEEEE--CTTSCEEEEEEETTCCTTCEEEEEEE--TTE---------------------------E
T ss_pred EEeeCCCCCCCCCCCCEEE--CCCCCEEEEeCCCcCCCCceEEEEEe--CCc---------------------------E
Confidence 22111 1 123444544 5567765544321 2233333 221 1
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECC--CC-eeE--eEEec-CcceeeeEEEEEecCCcEEEEEeCC
Q psy14961 171 VQSFEGHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLR--AD-KEV--ACYKK-DSILFGATSVDFSVSGRLLFAGYND 243 (320)
Q Consensus 171 ~~~~~~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~--~~-~~~--~~~~~-~~~~~~~~~~~~s~~~~~l~~g~~d 243 (320)
.. +..+....+.++|+|+|+.++ +.+.++.|.+||+. ++ +.. ..+.. ......+..+.++++|.++++...+
T Consensus 172 ~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 172 TK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp EE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred EE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC
Confidence 11 111122457899999998764 44567899999986 44 211 11111 1111124568899999988877777
Q ss_pred CeEEEEcCCCCeEEEEeecCCCceeEEEEC-cCCCeEEEecC
Q psy14961 244 YTINVWDSLKCCRVNHLMGHENRVSCLQVS-PDGTAFSSGSW 284 (320)
Q Consensus 244 g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s-~~~~~l~s~s~ 284 (320)
+.|..||. .+..+..+..+...+++++|+ |+++.|..++.
T Consensus 251 ~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 251 GAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp TEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 89999997 456666676677789999998 88876655443
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.29 E-value=1.2e-09 Score=103.86 Aligned_cols=233 Identities=12% Similarity=0.071 Sum_probs=135.8
Q ss_pred ceEEEEEcCCCCEEEEe-----cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCC--------
Q psy14961 21 WVMACAYAPSGSVVASG-----GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC-------- 87 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~-----~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-------- 87 (320)
.+.+++|||||++||.+ +....|+++|+...+. ....+.. .....+.|+ +++.|+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~---~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP---LETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE---EEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC---CccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 57788999999998853 3335788888854221 1111111 112456788 898888887764
Q ss_pred -----eEEEEECCCcce----eeeccc-CccceeEEEEeeCCCCCEEEEEeC----CCeEEEEeCCCCcEEEEeccCCcc
Q psy14961 88 -----TCALWDVESSQL----LQSFHG-HTGELMDLDLAPSETGNTFVSGSS----DKLVNIWDMRTGYCVQSFEGHHNL 153 (320)
Q Consensus 88 -----~v~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~----dg~i~lwd~~~~~~~~~~~~~~~~ 153 (320)
.|++|++.+... +..... +......+ ..+++|++|+.... +..|.++|+.++..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~--~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~---------- 271 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGA--TVTEDDRFLLISAANSTSGNRLYVKDLSQENA---------- 271 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEE--EECTTSCEEEEEEESSSSCCEEEEEETTSTTC----------
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEE--EEcCCCCEEEEEEccCCCCcEEEEEECCCCCC----------
Confidence 499999877542 222222 22233344 44677887754332 23666777654320
Q ss_pred ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eC---CCeEEEEECCCCee--EeEEecCcceeeeEE
Q psy14961 154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SD---DATCRLFDLRADKE--VACYKKDSILFGATS 227 (320)
Q Consensus 154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~---dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~ 227 (320)
....+..+....... ++++|+.|+.. .. .+.|..+|+.++.. ...+..+.. ...
T Consensus 272 ----------------~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~- 331 (693)
T 3iuj_A 272 ----------------PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ--QVL- 331 (693)
T ss_dssp ----------------CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS--SCE-
T ss_pred ----------------ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC--CEE-
Confidence 111222233333333 56666665443 33 36799999987543 122222221 112
Q ss_pred EEEecCCcEEEEEeC-CC--eEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCCeEEEecCC----CceEeeec
Q psy14961 228 VDFSVSGRLLFAGYN-DY--TINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGTAFSSGSWD----TTLRDEES 293 (320)
Q Consensus 228 ~~~s~~~~~l~~g~~-dg--~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~~l~s~s~D----~~ir~~~~ 293 (320)
.|++++..|+.... ++ .|.+||..... ...+ .++...+..+.++|+++.|+....+ +++..++.
T Consensus 332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 332 -TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp -EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred -EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 78999998877764 43 68889876443 3333 2445678888899988876655443 67777775
No 216
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.25 E-value=7e-08 Score=84.46 Aligned_cols=243 Identities=12% Similarity=0.020 Sum_probs=151.3
Q ss_pred CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccc
Q psy14961 30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGE 109 (320)
Q Consensus 30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 109 (320)
++..|+.++.++.+..+|........ .............. .+..++.++.++.+..+|..+++.+..+......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W----~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~ 175 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAW----QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS 175 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEE----EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE----EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc
Confidence 44577778888999999875322111 11111111111111 1457888889999999999999887765532211
Q ss_pred e-----eEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC---------------Ccc---------ccCCCeE
Q psy14961 110 L-----MDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH---------------HNL---------ITDDKLV 160 (320)
Q Consensus 110 v-----~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~---------------~~~---------~~~d~~i 160 (320)
. ....+ .+..++.++.++.+..+|..+++.+...... ... .+.++.+
T Consensus 176 ~~~~~~~~~~~----~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 176 LSLRGESAPTT----AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL 251 (376)
T ss_dssp ---CCCCCCEE----ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred eeecCCCCcEE----ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence 1 11111 1357888889999999999998876554321 000 1246778
Q ss_pred EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC-cceeeeEEEEEecCCcEEEE
Q psy14961 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD-SILFGATSVDFSVSGRLLFA 239 (320)
Q Consensus 161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~ 239 (320)
..+|.++++....... .....+... +..++.++.++.+..+|..+++.+-..... .... ..... .+..|+.
T Consensus 252 ~~~d~~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~--~~~~~--~~~~l~v 323 (376)
T 3q7m_A 252 TALDLRSGQIMWKREL--GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLL--TSPVL--YNGNLVV 323 (376)
T ss_dssp EEEETTTCCEEEEECC--CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCC--CCCEE--ETTEEEE
T ss_pred EEEECCCCcEEeeccC--CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcc--cCCEE--ECCEEEE
Confidence 8899988887655432 234444443 667888888999999999988876444311 1111 11112 3567888
Q ss_pred EeCCCeEEEEcCCCCeEEEEeecCCCceeE-EEECcCCCeEEEecCCCceEeee
Q psy14961 240 GYNDYTINVWDSLKCCRVNHLMGHENRVSC-LQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 240 g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~-i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
++.+|.+..+|..+++.+.........+.. ... . +..|+.++.|+.+..++
T Consensus 324 ~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 324 GDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-A-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE-E-TTEEEEEBTTSCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE-E-CCEEEEEeCCCEEEEEe
Confidence 899999999999888877665543333322 222 2 34677788899988775
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.21 E-value=2.9e-09 Score=92.77 Aligned_cols=238 Identities=7% Similarity=-0.098 Sum_probs=150.0
Q ss_pred eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe----------CCCeEEEEECCCcceeeecccCc----
Q psy14961 42 KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS----------GDCTCALWDVESSQLLQSFHGHT---- 107 (320)
Q Consensus 42 ~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~---- 107 (320)
.+.++|.+.. ....++..-..+ .+.+++++++++++. .++.|.+||+.+++.+..+....
T Consensus 47 ~vsvID~~t~----~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAGCG----VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEETTTT----EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred eEEEEECCCC----eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc
Confidence 7778886422 222333322334 688999999998886 37899999999999888875431
Q ss_pred ---cceeEEEEeeCCCCCEEEEEeC--CCeEEE--EeCCCCcEEEEec----------cCC--ccccCCCeEEEEECcC-
Q psy14961 108 ---GELMDLDLAPSETGNTFVSGSS--DKLVNI--WDMRTGYCVQSFE----------GHH--NLITDDKLVNIWDMRT- 167 (320)
Q Consensus 108 ---~~v~~~~~~~~~~~~~l~s~~~--dg~i~l--wd~~~~~~~~~~~----------~~~--~~~~~d~~i~iwd~~~- 167 (320)
.....+.+ +++|++++.+.. +..+.+ +|..+ +..+. +.. ...+.++.+.+.|+.+
T Consensus 121 ~~g~~P~~ia~--SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 121 SVGPRVHIIGN--CASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp CBSCCTTSEEE--CTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred ccCCCcceEEE--cCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccc
Confidence 12334555 567989998875 457888 99876 23221 111 1224567777778776
Q ss_pred ----Ceeee----eecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe--eEeEEecC-------c-ceeeeEEEE
Q psy14961 168 ----GYCVQ----SFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADK--EVACYKKD-------S-ILFGATSVD 229 (320)
Q Consensus 168 ----~~~~~----~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~-------~-~~~~~~~~~ 229 (320)
++... .+.-...+. . .+++..++..+. +.+.+.|+.... .+..+... . ...+...+.
T Consensus 196 ~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred cccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 33221 111112233 3 666676666666 899999986532 11111110 0 001112267
Q ss_pred EecCCcEEEEEeC-C--------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCC-eEEEec-CCCceEeeecchH
Q psy14961 230 FSVSGRLLFAGYN-D--------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGT-AFSSGS-WDTTLRDEESKNR 296 (320)
Q Consensus 230 ~s~~~~~l~~g~~-d--------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~-~l~s~s-~D~~ir~~~~~~~ 296 (320)
|+|+++.++++.. . +.+.++|+.+.+.+.++.... ...+|+|+|||+ ++++.. .++++.++|.+..
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 9999998887643 2 356699999988887765333 588999999998 567776 5999999997543
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=8.3e-11 Score=103.17 Aligned_cols=190 Identities=9% Similarity=0.015 Sum_probs=109.3
Q ss_pred CCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC----
Q psy14961 76 SDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH---- 151 (320)
Q Consensus 76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~---- 151 (320)
++..+++++.||.|..||..+++.+..+.. +.+.+..+ ..++..+++++.|+.|..||..+|+.+..+..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~--~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPT--HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecce--EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 467899999999999999999999887765 44433222 2345677778899999999998887654442210
Q ss_pred --c-c---------ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC
Q psy14961 152 --N-L---------ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD 219 (320)
Q Consensus 152 --~-~---------~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 219 (320)
. . .+.++.+..||.++++.+..+..+. ...++|++..+++++.|+.++.||.++++.+-.+...
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 0 1 1235679999999998877765543 2456678888999999999999999988765433221
Q ss_pred cceeeeEEEEEecCC---cEEEEEeCCCeEEEEcCCCCeEEEEeecCCCce-eEEEECcCCCe
Q psy14961 220 SILFGATSVDFSVSG---RLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV-SCLQVSPDGTA 278 (320)
Q Consensus 220 ~~~~~~~~~~~s~~~---~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i-~~i~~s~~~~~ 278 (320)
. .....++++. ..+++++.+|.+..||..+++.+-+.. ...++ ...+++++|..
T Consensus 160 ~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 160 D----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGLR 217 (369)
T ss_dssp E----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSCE
T ss_pred c----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCceE
Confidence 1 1122233332 467778899999999998887765444 33444 44566667753
No 219
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.20 E-value=1.1e-08 Score=87.71 Aligned_cols=269 Identities=12% Similarity=0.060 Sum_probs=160.3
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL 81 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 81 (320)
..|| .+++.......+...+.++...++|.+ ..++.+ +..+|.. . ................... +..++
T Consensus 43 ~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~--l~~~d~~--g---~~~~~~~~~~~~~~~~~~~--~~~l~ 111 (330)
T 3hxj_A 43 YAIN-TDGSVKWFFKSGEIIECRPSIGKDGTI-YFGSDK--VYAINPD--G---TEKWRFDTKKAIVSDFTIF--EDILY 111 (330)
T ss_dssp EEEC-TTSCEEESSCGGGEEEECCEETTTTEE-CCSSCE--EEEECCC--G---GGGGGSCC-----CCEEEE--TTEEE
T ss_pred EEEC-CCCcEEEEEecCCCcccceEEecCCcE-EEecCc--EEEECCC--C---cEEEEEECCCCcccCceEE--CCEEE
Confidence 4566 555555444455556677778788754 444443 6666531 1 1111222122222222222 56788
Q ss_pred EEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--------
Q psy14961 82 TGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL-------- 153 (320)
Q Consensus 82 s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~-------- 153 (320)
.++.++.+..+|.. ++....+......+.++.. .+++ .+..++.++.|..+|.. +.....+......
T Consensus 112 v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~--~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~ 186 (330)
T 3hxj_A 112 VTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIV--SEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK 186 (330)
T ss_dssp EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE--CTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT
T ss_pred EEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEE--cCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC
Confidence 88889999999988 7666555444333443333 3345 47778888999999998 7665444321111
Q ss_pred -----ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEE
Q psy14961 154 -----ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSV 228 (320)
Q Consensus 154 -----~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 228 (320)
+.. +.+..+| .+++...........+.++...++|. +..++.++.+..+|. +++....+...... ...+
T Consensus 187 ~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~--~~~~ 260 (330)
T 3hxj_A 187 DGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRI--ESSP 260 (330)
T ss_dssp TCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCC--CSCC
T ss_pred CCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCc--cccc
Confidence 122 5677778 66666655555556678888888876 555666778888875 34444433332221 1233
Q ss_pred EEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 229 DFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 229 ~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
.+.+++ .|..++.+|.+..+|. ++..+..+......+.++...++|+++ .++.+|.+++...+.
T Consensus 261 ~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 261 VIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIY-FGTRNGKFYALFNLE 324 (330)
T ss_dssp EECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEE-EECTTSCEEEEEC--
T ss_pred eEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEE-EEcCCCeEEEEeccc
Confidence 445455 5667788888999996 555555555455677888888888755 488899998877543
No 220
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=1.7e-08 Score=85.72 Aligned_cols=222 Identities=9% Similarity=0.085 Sum_probs=130.1
Q ss_pred eEeecccceeEEEEEe-----CccceEEEEEcCC-CCEEEEecCCCeEEEEEecccCCcccc-cccc-cccccCeEEEEe
Q psy14961 2 IIWDGLTQTKEHSVTM-----PATWVMACAYAPS-GSVVASGGLDNKVTVYAIALEDDSSAK-KKTV-ATHTSFISCCIF 73 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~-----~~~~V~~~~~~~~-~~~l~s~~~dg~i~v~~~~~~~~~~~~-~~~~-~~h~~~v~~~~~ 73 (320)
.+||..+++... +.. +...+.+++++++ |+++++.. .+.|.+|+.. .. .... .... ......+..+.+
T Consensus 49 ~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~ 124 (314)
T 1pjx_A 49 LRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GT-FEEIAKKDSEGRRMQGCNDCAF 124 (314)
T ss_dssp EEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SC-EEECCSBCTTSCBCBCCCEEEE
T ss_pred EEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CC-EEEEEeccCCCccccCCcCEEE
Confidence 467766555432 222 2356789999999 76555554 3468888764 21 1110 0000 112234678888
Q ss_pred cCCCCEEEEEeCC---------------CeEEEEECCCcceeeecccCccceeEEEEe--eCCCCCEEEEE-eCCCeEEE
Q psy14961 74 PNSDQQILTGSGD---------------CTCALWDVESSQLLQSFHGHTGELMDLDLA--PSETGNTFVSG-SSDKLVNI 135 (320)
Q Consensus 74 ~~~~~~l~s~~~d---------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~l~s~-~~dg~i~l 135 (320)
.+++..+++...+ +.|..|+.. ++.... ..+......+++. .+++++.++.+ ..++.|.+
T Consensus 125 d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~ 202 (314)
T 1pjx_A 125 DYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS 202 (314)
T ss_dssp CTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEE
T ss_pred CCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEE
Confidence 8888777666544 567777765 443322 2222334556654 11456555544 56788888
Q ss_pred EeCC-CCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCC-CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961 136 WDMR-TGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQ-SDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV 213 (320)
Q Consensus 136 wd~~-~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~ 213 (320)
||+. .+.... . .....+.++. ..+..++++++|+.+++...++.|.+||..+++..
T Consensus 203 ~~~~~~g~~~~--------------~--------~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~ 260 (314)
T 1pjx_A 203 YDIKGPAKIEN--------------K--------KVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPK 260 (314)
T ss_dssp EEEEETTEEEE--------------E--------EEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCS
T ss_pred EECCCCCcccc--------------c--------eEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEe
Confidence 8864 232100 0 0111122233 45678999999998888878899999998865544
Q ss_pred eEEecCcceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCC
Q psy14961 214 ACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLK 253 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~ 253 (320)
..+.... ..+..++|+|++..|+.+ ..++.|..|+...
T Consensus 261 ~~~~~~~--~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 261 MRIRCPF--EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECSS--SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEeCCC--CCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 4333221 235778899999955554 4567898888653
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.19 E-value=1.3e-09 Score=95.01 Aligned_cols=253 Identities=10% Similarity=-0.031 Sum_probs=154.6
Q ss_pred EeecccceeEEEEEeCccceEEEEEcCCCCEEEEec----------CCCeEEEEEecccCCccccccccccc-------c
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGG----------LDNKVTVYAIALEDDSSAKKKTVATH-------T 65 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~----------~dg~i~v~~~~~~~~~~~~~~~~~~h-------~ 65 (320)
+.|..+.+.+..+.....+ .++|+||++++..+. .++.|.+||..... ...++... .
T Consensus 50 vID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~----vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 50 VSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL----PIADIELPDAPRFSVG 123 (368)
T ss_dssp EEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC----EEEEEEETTSCSCCBS
T ss_pred EEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC----EEEEEECCCccccccC
Confidence 6788888888888776666 799999999888875 46889999875322 12222211 0
Q ss_pred cCeEEEEecCCCCEEEEEeC--CCeEEE--EECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCC-
Q psy14961 66 SFISCCIFPNSDQQILTGSG--DCTCAL--WDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRT- 140 (320)
Q Consensus 66 ~~v~~~~~~~~~~~l~s~~~--dg~v~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~- 140 (320)
..-..+.+++++++++++.. +..+.+ +|+.+ +..+... +. ..+.|.. ...+++.+.|+.+.+.|+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g-~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGA-AATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEE-TTEEECCCCTTSCEEEECCSS
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCC-CeEEEEEcCCCCEEEEECccc
Confidence 12336788999999998875 467888 88876 3333211 11 1122221 23455566677777777765
Q ss_pred ----CcEEE-------------EeccCC--ccccCCCeEEEEECcCCe--eeeeecC-------C---CCCeEEEEEcCC
Q psy14961 141 ----GYCVQ-------------SFEGHH--NLITDDKLVNIWDMRTGY--CVQSFEG-------H---QSDVNSVKFHPS 189 (320)
Q Consensus 141 ----~~~~~-------------~~~~~~--~~~~~d~~i~iwd~~~~~--~~~~~~~-------~---~~~v~~v~~~p~ 189 (320)
++... ...... ..++. +.+.+.|..... .+..+.- + ......++++|+
T Consensus 196 ~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~d 274 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKN 274 (368)
T ss_dssp CCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETT
T ss_pred cccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCC
Confidence 22211 000000 11223 567777775432 2221110 0 011122689999
Q ss_pred CCEEEEeeC---------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc-EEEEEe-CCCeEEEEcCCCCeEEE
Q psy14961 190 GDAVATGSD---------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR-LLFAGY-NDYTINVWDSLKCCRVN 258 (320)
Q Consensus 190 g~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~g~-~dg~v~~wd~~~~~~~~ 258 (320)
++.++.+.. ++.+.++|+.+.+.+..++... ....+.|+|||+ .+++.. .+++|.++|+.+.+.+.
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 998875432 2356699999988766554322 356789999998 455555 58999999999999888
Q ss_pred EeecCCCceeEEEECc
Q psy14961 259 HLMGHENRVSCLQVSP 274 (320)
Q Consensus 259 ~~~~h~~~i~~i~~s~ 274 (320)
++..... ...|++.+
T Consensus 352 ~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 352 SVELDKG-PESLSVQN 366 (368)
T ss_dssp ECCCCSC-CCEEECCC
T ss_pred EEECCCC-CCEEEeec
Confidence 8764443 35666654
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.16 E-value=5.2e-08 Score=82.55 Aligned_cols=208 Identities=16% Similarity=0.124 Sum_probs=120.6
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc--ccccCeEEEEecCCCCE
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISCCIFPNSDQQ 79 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~ 79 (320)
+.||..+++.. ... ....+.+++++++|+++++. ++.|.+||..... ........ .....+..+.+.+++..
T Consensus 38 ~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~--~~~~~~~~~~~~~~~~~di~~d~dG~l 111 (297)
T 3g4e_A 38 CRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQS--AVVLATVDNDKKNNRFNDGKVDPAGRY 111 (297)
T ss_dssp EEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE--EEEEEECCTTCSSEEEEEEEECTTSCE
T ss_pred EEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCc--EEEEEecCCCCCCCCCCCEEECCCCCE
Confidence 45666554432 222 34678899999999966654 4678888864211 11111111 11233567888888886
Q ss_pred EEEEeCC---------CeEEEEECCC-cceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeC--CCCcEEEE
Q psy14961 80 ILTGSGD---------CTCALWDVES-SQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDM--RTGYCVQS 146 (320)
Q Consensus 80 l~s~~~d---------g~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~--~~~~~~~~ 146 (320)
+++...+ ..-.+|.+.. ++... +.........+++ +++++.++ +.+.++.|.+||+ .++....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~--spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~- 187 (297)
T 3g4e_A 112 FAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDW--SLDHKIFYYIDSLSYSVDAFDYDLQTGQISN- 187 (297)
T ss_dssp EEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEE--CTTSCEEEEEEGGGTEEEEEEECTTTCCEEE-
T ss_pred EEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEE--cCCCCEEEEecCCCCcEEEEeccCCCCcccC-
Confidence 6654321 2334554432 33222 2222233345655 55677665 4556788988886 3443210
Q ss_pred eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeE
Q psy14961 147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGAT 226 (320)
Q Consensus 147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 226 (320)
.+....+..+......++++++|+..++...++.|..||..+++.+..+.... ..++
T Consensus 188 ---------------------~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~--~~~t 244 (297)
T 3g4e_A 188 ---------------------RRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV--DKTT 244 (297)
T ss_dssp ---------------------EEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS--SBEE
T ss_pred ---------------------cEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC--CCce
Confidence 00111122223456789999999988888888899999998887766655432 2357
Q ss_pred EEEEe-cCCcEEEEEeC
Q psy14961 227 SVDFS-VSGRLLFAGYN 242 (320)
Q Consensus 227 ~~~~s-~~~~~l~~g~~ 242 (320)
+++|+ |+++.|+..+.
T Consensus 245 ~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 245 SCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEESGGGCEEEEEEB
T ss_pred EEEEeCCCCCEEEEEcC
Confidence 89998 88887766553
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.15 E-value=2.8e-08 Score=88.22 Aligned_cols=197 Identities=9% Similarity=0.081 Sum_probs=127.3
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEE
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCV 144 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~ 144 (320)
....+.+.+++..+++...++.|+.||++++......... .... +++ +++++.|+++..++ .|.+++...+...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~--~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAV--TKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEE--CTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeE--ecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 4567888887776666666789999999877665443332 2222 444 55688888887765 6777776544322
Q ss_pred EEeccCCccccCCCeEEEEECcCCeeeeeecC-CCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEE---ecCc
Q psy14961 145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG-HQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACY---KKDS 220 (320)
Q Consensus 145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~---~~~~ 220 (320)
..+ ..+.. ....+.+++++|++..|+.+..++.|..||..++...... ....
T Consensus 208 ~~~------------------------g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 208 TRI------------------------GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp EEE------------------------EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred EEe------------------------eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence 111 00111 2334678999995555655777889999999876532220 1111
Q ss_pred ceeeeE-EEEEecC-CcEEEEEeCCCeEEEEcCCCCeEEEEeecCC---------------CceeEEEECcCCCeEEEec
Q psy14961 221 ILFGAT-SVDFSVS-GRLLFAGYNDYTINVWDSLKCCRVNHLMGHE---------------NRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 221 ~~~~~~-~~~~s~~-~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~---------------~~i~~i~~s~~~~~l~s~s 283 (320)
...... .++|+|+ +.++++-..++.|..|+.... ...+.++. .....|+|+|+|+++++-+
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 111112 7899995 556666667889999986543 33333332 3578999999999999888
Q ss_pred -CCCceEeeec
Q psy14961 284 -WDTTLRDEES 293 (320)
Q Consensus 284 -~D~~ir~~~~ 293 (320)
.+.+|+.++.
T Consensus 342 ~~~~~I~~~~~ 352 (409)
T 3hrp_A 342 FKGYCLRKLDI 352 (409)
T ss_dssp TTTCEEEEEET
T ss_pred CCCCEEEEEEC
Confidence 8999999994
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.13 E-value=9.9e-08 Score=84.12 Aligned_cols=244 Identities=11% Similarity=0.073 Sum_probs=130.6
Q ss_pred CCCCEEE-EecCCCeEEEEEecccCCccccccccc-----cccc--CeEEEEecCCCCEEEEEeCC------CeEEEEEC
Q psy14961 29 PSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVA-----THTS--FISCCIFPNSDQQILTGSGD------CTCALWDV 94 (320)
Q Consensus 29 ~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~-----~h~~--~v~~~~~~~~~~~l~s~~~d------g~v~iwd~ 94 (320)
++.++|+ ++..++.|.++|+............+. ...+ .---+...+++ .++++..+ |.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 6677555 566788999999853222222222221 0000 11123456777 66666555 78999999
Q ss_pred CCcceeeecccCccc---eeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeee
Q psy14961 95 ESSQLLQSFHGHTGE---LMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCV 171 (320)
Q Consensus 95 ~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 171 (320)
++.+.+..+.....+ -+.+-+ +++++.+++..+-.-- ....|... ..........|.+||+.+++.+
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~--~p~~~~mvsS~wg~p~---~~~~g~~~-----~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWW--NLPNEVLVSSEWAVPN---TIEDGLKL-----EHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEE--ETTTTEEEECBCCCHH---HHTTCCCT-----TTHHHHSCCEEEEEETTTTEEE
T ss_pred CCCeEEEEEccCCCCccccceEEE--CCCCCEEEEccCcCcc---ccccccch-----hhhhhccCCEEEEEECCCCcEe
Confidence 999988877632222 122333 4467777777521000 00000000 0000012334444444444444
Q ss_pred eeecCC--CCCeEEEEE--cCCCCEEEEee------CCCeEEEEECCCCee--EeEEecCc-----------c-----ee
Q psy14961 172 QSFEGH--QSDVNSVKF--HPSGDAVATGS------DDATCRLFDLRADKE--VACYKKDS-----------I-----LF 223 (320)
Q Consensus 172 ~~~~~~--~~~v~~v~~--~p~g~~l~s~s------~dg~i~iwd~~~~~~--~~~~~~~~-----------~-----~~ 223 (320)
.++.-- ......+.| +|++++++.++ .+++|.+|..+.++. ...+.... . ..
T Consensus 242 ~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~ 321 (462)
T 2ece_A 242 HSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPP 321 (462)
T ss_dssp EEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred eEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCC
Confidence 433221 112334555 99999887666 466887766554321 11110000 0 12
Q ss_pred eeEEEEEecCCcEEEEEe-CCCeEEEEcCCC---CeEEEEeecC-----------C---CceeEEEECcCCCeEEEec
Q psy14961 224 GATSVDFSVSGRLLFAGY-NDYTINVWDSLK---CCRVNHLMGH-----------E---NRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~---~~~~~~~~~h-----------~---~~i~~i~~s~~~~~l~s~s 283 (320)
.+..+.+||||++|+++. ..+.|.+||+.. .+.+.+..-. . ..-..++++|||++|..+.
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 256788999999998887 478999999742 3444433211 0 1358899999999988875
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.12 E-value=4e-08 Score=92.83 Aligned_cols=245 Identities=13% Similarity=0.133 Sum_probs=154.0
Q ss_pred CCCEEEEecCCCeEEEEEecccCCccccccccc-ccccCeEE-EEecCCCCEEEEEeC------CCeEEEEECCCcceee
Q psy14961 30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA-THTSFISC-CIFPNSDQQILTGSG------DCTCALWDVESSQLLQ 101 (320)
Q Consensus 30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~-~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~ 101 (320)
++..|+.++.|+.+..+|....+.......... .....+.+ ... .+..++.++. ++.|+.+|..+++.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 456788888899999998753322111110000 00011111 111 1345666553 7999999999999887
Q ss_pred ecccCccc-------------------------------e-eEEEEeeCCCCCEEEEEeCCC------------------
Q psy14961 102 SFHGHTGE-------------------------------L-MDLDLAPSETGNTFVSGSSDK------------------ 131 (320)
Q Consensus 102 ~~~~~~~~-------------------------------v-~~~~~~~~~~~~~l~s~~~dg------------------ 131 (320)
.+...... + ..+++ ++++..++.++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~--d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~ 282 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTF--DAELNTMYVGTGNGSPWSHKVRSPKGGDNLYL 282 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEE--ETTTTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeE--cCCCCEEEEECCCCccccCCCCCccCCCCeee
Confidence 66432211 0 12333 34567888877664
Q ss_pred -eEEEEeCCCCcEEEEeccCCc---------------------------cccCCCeEEEEECcCCeeeeeecCCC-----
Q psy14961 132 -LVNIWDMRTGYCVQSFEGHHN---------------------------LITDDKLVNIWDMRTGYCVQSFEGHQ----- 178 (320)
Q Consensus 132 -~i~lwd~~~~~~~~~~~~~~~---------------------------~~~~d~~i~iwd~~~~~~~~~~~~~~----- 178 (320)
.|..+|..+|+.+..++.... ....++.++++|.++++.+..++...
T Consensus 283 ~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 283 ASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 599999999988766542110 01346789999999998876543211
Q ss_pred ------CCe------------------------EEEEEcCCCCEEEEeeC------------------------------
Q psy14961 179 ------SDV------------------------NSVKFHPSGDAVATGSD------------------------------ 198 (320)
Q Consensus 179 ------~~v------------------------~~v~~~p~g~~l~s~s~------------------------------ 198 (320)
.++ ..++++|++..+++...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 011 15789998888876532
Q ss_pred -------------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeec-CC
Q psy14961 199 -------------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMG-HE 264 (320)
Q Consensus 199 -------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~ 264 (320)
.|.|..||+.+++.+-.++..... ....+...+..++.|+.+|.+++||..+++.+.++.. +.
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~---~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 519 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW---NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG 519 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC---CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC---cCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC
Confidence 278999999999876655543222 2234567788899999999999999999999887763 33
Q ss_pred CceeEEEECcCCCeEEE
Q psy14961 265 NRVSCLQVSPDGTAFSS 281 (320)
Q Consensus 265 ~~i~~i~~s~~~~~l~s 281 (320)
....-+.|+++|++++.
T Consensus 520 ~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 520 VVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cccCCEEEEeCCEEEEE
Confidence 33355677888876544
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.10 E-value=2.3e-08 Score=94.64 Aligned_cols=245 Identities=13% Similarity=0.114 Sum_probs=151.3
Q ss_pred CCCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEE-EEecCCCCEEEEEe------CCCeEEEEECCCcceee
Q psy14961 30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISC-CIFPNSDQQILTGS------GDCTCALWDVESSQLLQ 101 (320)
Q Consensus 30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~-~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~ 101 (320)
++..|+.++.|+.+..+|....+........... ....+.+ ... .+..++.++ .+|.|..||..+++.+.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 3457888888999999987533222111110000 0001110 001 133555554 37899999999999877
Q ss_pred ecccCc------------------------------ccee-EEEEeeCCCCCEEEEEeCCCe------------------
Q psy14961 102 SFHGHT------------------------------GELM-DLDLAPSETGNTFVSGSSDKL------------------ 132 (320)
Q Consensus 102 ~~~~~~------------------------------~~v~-~~~~~~~~~~~~l~s~~~dg~------------------ 132 (320)
.+.... ..++ .+++ +++...++.++.++.
T Consensus 198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~--d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAY--DPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEE--ETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EecccCCCcccccccccccccccccCCceeeecCCCCccccceeE--cCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 654210 0111 2333 345678888887763
Q ss_pred -EEEEeCCCCcEEEEeccCCc---------------------------cccCCCeEEEEECcCCeeeeeecCCC------
Q psy14961 133 -VNIWDMRTGYCVQSFEGHHN---------------------------LITDDKLVNIWDMRTGYCVQSFEGHQ------ 178 (320)
Q Consensus 133 -i~lwd~~~~~~~~~~~~~~~---------------------------~~~~d~~i~iwd~~~~~~~~~~~~~~------ 178 (320)
|..+|..+|+.+..++.... ....++.++++|.++++.+...+...
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 99999999988776643100 01246789999999998763321100
Q ss_pred ----------------------C-----------CeEEEEEcCCCCEEEEeeC---------------------------
Q psy14961 179 ----------------------S-----------DVNSVKFHPSGDAVATGSD--------------------------- 198 (320)
Q Consensus 179 ----------------------~-----------~v~~v~~~p~g~~l~s~s~--------------------------- 198 (320)
. .-..++++|+...+++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 0 0113788998887776522
Q ss_pred ------------------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961 199 ------------------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL 260 (320)
Q Consensus 199 ------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~ 260 (320)
+|.|..||+.+++.+-.++...... ...+...+.+++.|+.||.++.||..+++.+-++
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~---~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN---GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC---CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc---CccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 3789999999998776555433221 2245667889999999999999999999988777
Q ss_pred ecCCC-ceeEEEECcCCCeEEE
Q psy14961 261 MGHEN-RVSCLQVSPDGTAFSS 281 (320)
Q Consensus 261 ~~h~~-~i~~i~~s~~~~~l~s 281 (320)
..... ...-+.|+.||++++.
T Consensus 513 ~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 513 PAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp ECSSCCCSCCEEEEETTEEEEE
T ss_pred eCCCCcccCceEEEECCEEEEE
Confidence 54332 2345778889886443
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.08 E-value=3.2e-07 Score=80.24 Aligned_cols=250 Identities=11% Similarity=0.029 Sum_probs=151.9
Q ss_pred CCCEEEEecCCCeEEEEEecccCCccccccccccc-------ccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeee
Q psy14961 30 SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATH-------TSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQS 102 (320)
Q Consensus 30 ~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 102 (320)
.+..|+.++.++.+..+|....+..... .+... ...+.+.. ...+..++.++.++.+..+|..+++.+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSV--SLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEE--ECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeee--cCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEE
Confidence 3456777778888888887432211111 11100 12222221 12356888899999999999999988766
Q ss_pred cccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc------------------ccCCCeEEEEE
Q psy14961 103 FHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL------------------ITDDKLVNIWD 164 (320)
Q Consensus 103 ~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~------------------~~~d~~i~iwd 164 (320)
............+ .+..++.++.++.|..+|..+|+.+..+...... ...++.+..+|
T Consensus 129 ~~~~~~~~~~p~~----~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 129 TKVAGEALSRPVV----SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EECSSCCCSCCEE----ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEE
T ss_pred EeCCCceEcCCEE----ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEE
Confidence 5543221111112 1458888999999999999999876655322110 12467888999
Q ss_pred CcCCeeeeeecCCCCC-------eEEEEEcC--CCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCc
Q psy14961 165 MRTGYCVQSFEGHQSD-------VNSVKFHP--SGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGR 235 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~-------v~~v~~~p--~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 235 (320)
.++++........... +..+.-.| .+..++.++.++.+..+|..+++.+-...... ...+ ..++.
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~----~~~~--~~~~~ 278 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS----VNDF--IVDGN 278 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC----EEEE--EEETT
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC----CCCc--eEECC
Confidence 9988876554322100 00011111 24678888889999999999887664433221 1222 23466
Q ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeec-CCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 236 LLFAGYNDYTINVWDSLKCCRVNHLMG-HENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 236 ~l~~g~~dg~v~~wd~~~~~~~~~~~~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.++.++.++.+..+|..+++.+-.... ....+..... .+..|+.++.++.+..++.+
T Consensus 279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVE 336 (376)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECC
Confidence 788888899999999988876644431 1222233333 24577888889999999854
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.06 E-value=2.9e-08 Score=93.96 Aligned_cols=218 Identities=14% Similarity=0.114 Sum_probs=139.3
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeecccC--ccceeEEEEeeCCCCCEEEEEe------CCCeEEEEeCCCCcEEEEec
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSFHGH--TGELMDLDLAPSETGNTFVSGS------SDKLVNIWDMRTGYCVQSFE 148 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~~------~dg~i~lwd~~~~~~~~~~~ 148 (320)
+..++.++.|+.+..+|..+++.+..+... ......+...|.-.+..++.++ .++.|..||.++|+.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 568899999999999999999988766532 1110111101100124555554 37899999999999876654
Q ss_pred cCC-------------------------------------------ccc---cCCC-------------------eEEEE
Q psy14961 149 GHH-------------------------------------------NLI---TDDK-------------------LVNIW 163 (320)
Q Consensus 149 ~~~-------------------------------------------~~~---~~d~-------------------~i~iw 163 (320)
... ..+ +.++ .|..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 100 000 0111 38889
Q ss_pred ECcCCeeeeeecC--CC-------CCeEEEEEcCCCC---EEEEeeCCCeEEEEECCCCeeEeEEecCcce---------
Q psy14961 164 DMRTGYCVQSFEG--HQ-------SDVNSVKFHPSGD---AVATGSDDATCRLFDLRADKEVACYKKDSIL--------- 222 (320)
Q Consensus 164 d~~~~~~~~~~~~--~~-------~~v~~v~~~p~g~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~--------- 222 (320)
|.++++.+-.++. |. .+........+|+ .++.++.+|.++++|..+++.+...+.....
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 9999988766543 21 1222233333564 7889999999999999999876433211100
Q ss_pred ---------------------e-------eeEEEEEecCCcEEEEEeC--------------------------------
Q psy14961 223 ---------------------F-------GATSVDFSVSGRLLFAGYN-------------------------------- 242 (320)
Q Consensus 223 ---------------------~-------~~~~~~~s~~~~~l~~g~~-------------------------------- 242 (320)
+ .-..++|+|+..+++++.+
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 0 0112678998888877632
Q ss_pred -------------CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 243 -------------DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 243 -------------dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
+|.|..||+.+++.+-++..+. ++..-.++..+.+++.|+.|+.++.||.++
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCC
Confidence 3779999999887765554433 334446666778999999999999999643
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.03 E-value=8.8e-08 Score=90.53 Aligned_cols=215 Identities=12% Similarity=0.114 Sum_probs=143.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCcceeeecccC-c----cceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEE
Q psy14961 76 SDQQILTGSGDCTCALWDVESSQLLQSFHGH-T----GELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCV 144 (320)
Q Consensus 76 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~ 144 (320)
.+..++.++.|+.+..+|..+++.+..+... . ..+.. .|...+..++.++. ++.|..+|..+|+.+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~---~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITG---APRVFKGKVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCS---CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCccccc---CcEEECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence 3568899999999999999999988776643 1 11111 11112346666653 689999999999887
Q ss_pred EEeccCCc--------------------------------------------cc---cCC-------------------C
Q psy14961 145 QSFEGHHN--------------------------------------------LI---TDD-------------------K 158 (320)
Q Consensus 145 ~~~~~~~~--------------------------------------------~~---~~d-------------------~ 158 (320)
..+..... .+ +.+ .
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 65532110 00 011 1
Q ss_pred eEEEEECcCCeeeeeecC--CC-------CCeEEEEEcCCC---CEEEEeeCCCeEEEEECCCCeeEeEEecCcce----
Q psy14961 159 LVNIWDMRTGYCVQSFEG--HQ-------SDVNSVKFHPSG---DAVATGSDDATCRLFDLRADKEVACYKKDSIL---- 222 (320)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~--~~-------~~v~~v~~~p~g---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---- 222 (320)
.|..+|.++++..-.++. |. ....-+....+| ..++.++.+|.+.++|..+++.+...+.....
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 477788888887765432 21 122233444467 67899999999999999999887554422100
Q ss_pred ----------------------e-------eeEEEEEecCCcEEEEEeCC------------------------------
Q psy14961 223 ----------------------F-------GATSVDFSVSGRLLFAGYND------------------------------ 243 (320)
Q Consensus 223 ----------------------~-------~~~~~~~s~~~~~l~~g~~d------------------------------ 243 (320)
+ .-..++|+|++.+++++..+
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 0 00146789998888876432
Q ss_pred -------------CeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 244 -------------YTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 244 -------------g~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
|.|..||..+++.+-+.. +..++....++.++.+++.++.|+.++.+|.+
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 789999998887765443 44455666677788888889999999999964
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.02 E-value=2.4e-08 Score=94.86 Aligned_cols=208 Identities=15% Similarity=0.085 Sum_probs=120.1
Q ss_pred cccCeEEEEecCCCCEEEE-----EeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961 64 HTSFISCCIFPNSDQQILT-----GSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138 (320)
Q Consensus 64 h~~~v~~~~~~~~~~~l~s-----~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~ 138 (320)
|...+....|++++++|+- |+.+..|++||+++++.+.... .......++|+ ||+.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws---Dg~~l~y~~~~~~------ 196 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL---GNEGFFYSSYDKP------ 196 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE---TTTEEEEEESSCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe---CCCEEEEEEecCc------
Confidence 4446777889999998873 3333689999999988654311 11112334554 5777877776632
Q ss_pred CCCcEEEEeccCCccccCCCeEEEEECcCCe----eeeeecC-CCCCeEEEEEcCCCCEEEEee----CCCeEEEEECCC
Q psy14961 139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGY----CVQSFEG-HQSDVNSVKFHPSGDAVATGS----DDATCRLFDLRA 209 (320)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~----~~~~~~~-~~~~v~~v~~~p~g~~l~s~s----~dg~i~iwd~~~ 209 (320)
..+. . ........|++|++.+.. ++..... |.....++.|+|+|++|+... .++.+.++|+.+
T Consensus 197 ~~~~----~----~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 197 DGSE----L----SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp C---------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred cccc----c----cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 0000 0 000112345555554432 3333333 445577899999999875432 235899999876
Q ss_pred Ce-eEeEEecCcceeeeEEEEEecCCcEEEEEeC----CCeEEEEcCCCCeE--EEEeecCCCceeEEEECcCCCeEEEe
Q psy14961 210 DK-EVACYKKDSILFGATSVDFSVSGRLLFAGYN----DYTINVWDSLKCCR--VNHLMGHENRVSCLQVSPDGTAFSSG 282 (320)
Q Consensus 210 ~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~----dg~v~~wd~~~~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~ 282 (320)
+. ....+..... ..... ++++|..|+.-++ .+.|..+|+..... ...+.+|...+. .|+++++.|+..
T Consensus 269 ~~~~~~~l~~~~~--~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 269 ENAPLLTVQGDLD--ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp TTCCCEEEECSSS--SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred CCCceEEEeCCCC--ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence 52 2222222111 11222 6677666555443 36788899876543 245677776665 999999888777
Q ss_pred cCCC---ceEeeecc
Q psy14961 283 SWDT---TLRDEESK 294 (320)
Q Consensus 283 s~D~---~ir~~~~~ 294 (320)
..+. .|++++..
T Consensus 344 ~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 344 YMVDATARVEQFDYE 358 (693)
T ss_dssp EEETTEEEEEEECTT
T ss_pred EEECCeeEEEEEECC
Confidence 6544 57777753
No 231
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.99 E-value=2.3e-07 Score=78.84 Aligned_cols=208 Identities=12% Similarity=0.053 Sum_probs=120.5
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEEEEecCCCCEE
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISCCIFPNSDQQI 80 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l 80 (320)
..|+. +++. ..+..+...+.+++++++|+++++...++.|.+|+.+ ............ ....+..+.+.+++..+
T Consensus 70 ~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~ 145 (305)
T 3dr2_A 70 LGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQAHLLVGRYAGKRLNSPNDLIVARDGAIW 145 (305)
T ss_dssp EEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECEETTEECSCCCCEEECTTSCEE
T ss_pred EEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCEEEEEeccCCCccCCCCCEEECCCCCEE
Confidence 35555 2322 2334456678899999999977776666788888753 111111011111 11234567888888877
Q ss_pred EE----EeC-------------CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCC------CeEEEEe
Q psy14961 81 LT----GSG-------------DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD------KLVNIWD 137 (320)
Q Consensus 81 ~s----~~~-------------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d------g~i~lwd 137 (320)
++ |.. .+.|..+|..+++..... .......+++ +++++.|+.+... +.|.+|+
T Consensus 146 ~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~--spdg~~lyv~~~~~~~~~~~~i~~~~ 221 (305)
T 3dr2_A 146 FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF--SPDEQTLYVSQTPEQGHGSVEITAFA 221 (305)
T ss_dssp EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE--CTTSSEEEEEECCC---CCCEEEEEE
T ss_pred EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE--cCCCCEEEEEecCCcCCCCCEEEEEE
Confidence 75 331 256777787666544322 2233445555 5678877777654 5788887
Q ss_pred CCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe
Q psy14961 138 MRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK 217 (320)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~ 217 (320)
+..+. +... +++ ... .......++++++|+..++. .+ .|.+|+.. ++.+..+.
T Consensus 222 ~~~~~-l~~~-------------~~~--------~~~--~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~-g~~~~~~~ 274 (305)
T 3dr2_A 222 WRDGA-LHDR-------------RHF--------ASV--PDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD-GQLLGHIP 274 (305)
T ss_dssp EETTE-EEEE-------------EEE--------ECC--SSSCCCSEEECTTSCEEECC-SS-EEEEECTT-SCEEEEEE
T ss_pred ecCCC-ccCC-------------eEE--------EEC--CCCCCCeEEECCCCCEEEec-CC-cEEEECCC-CCEEEEEE
Confidence 65432 1100 000 000 11234568899999955444 44 49999984 55554444
Q ss_pred cCcceeeeEEEEEecCCcEEEEEeCCCeEE
Q psy14961 218 KDSILFGATSVDFSVSGRLLFAGYNDYTIN 247 (320)
Q Consensus 218 ~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~ 247 (320)
... .+..++|+|+++.|..++.++..+
T Consensus 275 ~~~---~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 275 TPG---TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CSS---CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CCC---ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 332 356788999999888888765443
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.95 E-value=1.8e-06 Score=74.13 Aligned_cols=205 Identities=9% Similarity=-0.028 Sum_probs=115.9
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccccc--ccccCeEEEEecCCCCE
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVA--THTSFISCCIFPNSDQQ 79 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~ 79 (320)
.+||..+++.. .+.. ...+.+++++++|+++++. . ..|.+||..... ........ .....+..+.+.+++..
T Consensus 74 ~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~d~~G~l 147 (326)
T 2ghs_A 74 HELHLASGRKT-VHAL-PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGV--LTLHAELESDLPGNRSNDGRMHPSGAL 147 (326)
T ss_dssp EEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCC--EEEEECSSTTCTTEEEEEEEECTTSCE
T ss_pred EEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCc--EEEEeeCCCCCCCCCCCCEEECCCCCE
Confidence 45666554432 2232 3578899999999877765 3 348888764221 11111111 11234677888888876
Q ss_pred EEEEeC------CCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEE-eCCCeEEEEeCC--CC-cEEEEecc
Q psy14961 80 ILTGSG------DCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSG-SSDKLVNIWDMR--TG-YCVQSFEG 149 (320)
Q Consensus 80 l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~-~~dg~i~lwd~~--~~-~~~~~~~~ 149 (320)
+++... .+.|..++ +++... +.........+++ +++++.++.+ +.++.|.+||+. ++ ...
T Consensus 148 ~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~--s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~----- 217 (326)
T 2ghs_A 148 WIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICF--SPDGTTGYFVDTKVNRLMRVPLDARTGLPTG----- 217 (326)
T ss_dssp EEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEE--CTTSCEEEEEETTTCEEEEEEBCTTTCCBSS-----
T ss_pred EEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEE--cCCCCEEEEEECCCCEEEEEEcccccCCccc-----
Confidence 665432 24455555 444322 2222223445555 5567766544 456789899875 33 210
Q ss_pred CCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEE
Q psy14961 150 HHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVD 229 (320)
Q Consensus 150 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 229 (320)
. ......+.........++++++|.+.++...++.|..||. .++.+..+.... ..+.+++
T Consensus 218 -------~----------~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~--~~~~~~a 277 (326)
T 2ghs_A 218 -------K----------AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG--KQTTCPA 277 (326)
T ss_dssp -------C----------CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC--SBEEEEE
T ss_pred -------C----------ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC--CCcEEEE
Confidence 0 0011111122234578999999998887777789999998 455544443322 2357889
Q ss_pred Ee-cCCcEEEEEeC
Q psy14961 230 FS-VSGRLLFAGYN 242 (320)
Q Consensus 230 ~s-~~~~~l~~g~~ 242 (320)
|+ |++..|++++.
T Consensus 278 f~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 278 FIGPDASRLLVTSA 291 (326)
T ss_dssp EESTTSCEEEEEEB
T ss_pred EecCCCCEEEEEec
Confidence 98 88877765543
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=1.4e-07 Score=81.63 Aligned_cols=204 Identities=9% Similarity=0.034 Sum_probs=120.2
Q ss_pred cCeEEEEecCCCCEEEEEeC--CCeEEEEECCCcceeeecc-------cCccceeEEEEeeCCCCCEEEEEeC-----CC
Q psy14961 66 SFISCCIFPNSDQQILTGSG--DCTCALWDVESSQLLQSFH-------GHTGELMDLDLAPSETGNTFVSGSS-----DK 131 (320)
Q Consensus 66 ~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~l~s~~~-----dg 131 (320)
.....+.++++++.+++..+ ++.++||.+.+++. ..+. .+...+..+++ +++++++++-.. ++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~--d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKS--DGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEE--CSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEE--cCCCcEEEEcCCCCcCCCC
Confidence 45677888888887777532 34355665544443 2222 12344555655 445554443322 46
Q ss_pred eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCE-EEEee---CCCeEEEEEC
Q psy14961 132 LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDA-VATGS---DDATCRLFDL 207 (320)
Q Consensus 132 ~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~-l~s~s---~dg~i~iwd~ 207 (320)
.|.+||+.+++.+..+..... ...+...++.++++|++.. +++-. .++.|.+||+
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~---------------------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPP---------------------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTT---------------------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred eEEEEECCCCeEEEEEECChh---------------------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence 777777776654443321100 0012234578999986544 45555 6789999999
Q ss_pred CCCeeEeEEecC-------------cc--------------eeeeEEEEEecCCcEEEEEeCCC-eEEEEcCC---CC--
Q psy14961 208 RADKEVACYKKD-------------SI--------------LFGATSVDFSVSGRLLFAGYNDY-TINVWDSL---KC-- 254 (320)
Q Consensus 208 ~~~~~~~~~~~~-------------~~--------------~~~~~~~~~s~~~~~l~~g~~dg-~v~~wd~~---~~-- 254 (320)
.+++.......+ .. ...+..++|+|+|+.|+.+...+ .+..++.. ..
T Consensus 153 ~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 153 QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 876654332110 00 01346799999999888887665 45444421 10
Q ss_pred ---eEE--EEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 255 ---CRV--NHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 255 ---~~~--~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
+.. ....++......|+++++|.++++...++.|..|+.
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 000 012244445678999999999999999999999997
No 234
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.88 E-value=1.3e-06 Score=82.38 Aligned_cols=277 Identities=16% Similarity=0.118 Sum_probs=147.3
Q ss_pred EEEEcC-CCCEEEEecCCC-----------eEEEEEecccCCcccccccccc-cccCeEEEEecCCCCEEEEEeC-CCeE
Q psy14961 24 ACAYAP-SGSVVASGGLDN-----------KVTVYAIALEDDSSAKKKTVAT-HTSFISCCIFPNSDQQILTGSG-DCTC 89 (320)
Q Consensus 24 ~~~~~~-~~~~l~s~~~dg-----------~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~-dg~v 89 (320)
++++.+ ++++++.|+.+. .+.+||... ........+.. +.....+..+..++..++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST--GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT--CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCC--CcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 556677 888888887543 466776642 22222222211 2222334556677888888884 5689
Q ss_pred EEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEe-CC-----CeEEEEeCCCCcEEEEe--------cc-CCccc
Q psy14961 90 ALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SD-----KLVNIWDMRTGYCVQSF--------EG-HHNLI 154 (320)
Q Consensus 90 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~d-----g~i~lwd~~~~~~~~~~--------~~-~~~~~ 154 (320)
.+||+.+++-...-..+..... ......++++.++.|+ .+ ..+.+||..++.....- .. +....
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred EEecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 9999987654322111111111 1122234678888888 34 46899999887644320 00 00000
Q ss_pred -------------------cCCCeEEEEECcCCeeeeeecCCC---------CCeEEEEEcC-CCCEEEEeeCCC-----
Q psy14961 155 -------------------TDDKLVNIWDMRTGYCVQSFEGHQ---------SDVNSVKFHP-SGDAVATGSDDA----- 200 (320)
Q Consensus 155 -------------------~~d~~i~iwd~~~~~~~~~~~~~~---------~~v~~v~~~p-~g~~l~s~s~dg----- 200 (320)
.....+..||..+..-......+. ..-.++.|.. +++.++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 013456777876654322221111 1224455544 567777877532
Q ss_pred ------eEEEEECCCCeeEeEE-ecCcceeeeEEEEEecCCcEEEEEeCC-----------CeEEEEcCCCCeEE--EEe
Q psy14961 201 ------TCRLFDLRADKEVACY-KKDSILFGATSVDFSVSGRLLFAGYND-----------YTINVWDSLKCCRV--NHL 260 (320)
Q Consensus 201 ------~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~d-----------g~v~~wd~~~~~~~--~~~ 260 (320)
.+.+||..+.+-.... ...........+.+.|++++++.|+.+ ..+.+||..+.+-. ..+
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~ 506 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN 506 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC
Confidence 6778887665422211 010111112345567899999998754 46889997654322 111
Q ss_pred ecCCCceeEEEECcCCCeEEEecC-CC--ceEeeecchHhhhheee
Q psy14961 261 MGHENRVSCLQVSPDGTAFSSGSW-DT--TLRDEESKNRYVQYLLR 303 (320)
Q Consensus 261 ~~h~~~i~~i~~s~~~~~l~s~s~-D~--~ir~~~~~~~~~~~~~~ 303 (320)
......-.+..+.|||++|+.||. ++ ....++.+.....|++.
T Consensus 507 ~~~R~~hs~a~ll~dg~v~v~GG~~~~~~~~~~~~~e~~~Ppyl~~ 552 (656)
T 1k3i_A 507 SIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYLYN 552 (656)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECGGGBC
T ss_pred CCccccccHhhcCCCcEEEecCCCCCCCCCCCeeEEEEEeChhhcc
Confidence 111222334566799999999985 22 34445544444455544
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=1.1e-06 Score=72.05 Aligned_cols=166 Identities=11% Similarity=0.093 Sum_probs=113.9
Q ss_pred eEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEEEeccCCccc---------------cCCCeEEEEECcCCeeeee
Q psy14961 111 MDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGHHNLI---------------TDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 111 ~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~i~iwd~~~~~~~~~ 173 (320)
..+.+. ++.++.+.+.+| .|+.+|+.+++.+..+.-..... -.++.+.++|..+.+.+.+
T Consensus 46 qGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 46 EGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred ceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 445554 355666777766 89999999999887664322111 1367889999999998888
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC---cceeeeEEEEEecCCcEEEEEeCCCeEEEEc
Q psy14961 174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD---SILFGATSVDFSVSGRLLFAGYNDYTINVWD 250 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd 250 (320)
+...... ..++++++.|+....++.|.++|..+.+.+....-. ........+.+. +|...+....++.|.+.|
T Consensus 123 i~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 123 FNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 7653322 344466777766666788999999988776655432 111223456665 787666666788999999
Q ss_pred CCCCeEEEEeecC------------CCceeEEEECcCCCeEEEec
Q psy14961 251 SLKCCRVNHLMGH------------ENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 251 ~~~~~~~~~~~~h------------~~~i~~i~~s~~~~~l~s~s 283 (320)
..+++.+..+.-. .+..+.|||+|+++.|...+
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 9998887766421 23569999999877766665
No 236
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.82 E-value=1.4e-09 Score=95.43 Aligned_cols=166 Identities=14% Similarity=0.106 Sum_probs=92.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCcEEEEeccCC-----------ccc--cCCCeEEEEECcCCeeeeeecCCCCC-eE-EE
Q psy14961 120 TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHH-----------NLI--TDDKLVNIWDMRTGYCVQSFEGHQSD-VN-SV 184 (320)
Q Consensus 120 ~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~-----------~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~-v~-~v 184 (320)
++..+++++.|+.|..||..+|+.+..+.... ..+ +.++.++.||.++++.+..+..+... +. +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp 87 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP 87 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence 46799999999999999999998876664311 111 35788999999888776555433211 10 01
Q ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC
Q psy14961 185 KFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE 264 (320)
Q Consensus 185 ~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~ 264 (320)
.+. .+..+++++.|+.+..||..+++.+..+.... ...++|++..+++++.++.|..||..+++.+-++..+.
T Consensus 88 ~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 88 CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp CC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 111 34568888889999999999988765443321 23456788899999999999999988776543332111
Q ss_pred CceeEEEECcCC---CeEEEecCCCceEeeecc
Q psy14961 265 NRVSCLQVSPDG---TAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 265 ~~i~~i~~s~~~---~~l~s~s~D~~ir~~~~~ 294 (320)
....+++++. ..++.++.|+.++.+|.+
T Consensus 161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp --ECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred --ccCccccCCccccceEEEECCCCEEEEEECC
Confidence 1233344432 456778899999999864
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.80 E-value=2.4e-08 Score=90.92 Aligned_cols=248 Identities=11% Similarity=0.037 Sum_probs=147.9
Q ss_pred CCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEe-c-CCCCEEEEEeC------------------CC
Q psy14961 29 PSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIF-P-NSDQQILTGSG------------------DC 87 (320)
Q Consensus 29 ~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~l~s~~~------------------dg 87 (320)
+||++++.... +..|.+.|++..+ .....++.. ....-.+.+ . +++++++++++ ++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~--~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMK--CDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTE--EEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCce--EeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 48887777655 4568888875321 111112221 122345555 4 78888888852 45
Q ss_pred eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC---------------eEEEEeCCCCcEEEEeccCCc
Q psy14961 88 TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK---------------LVNIWDMRTGYCVQSFEGHHN 152 (320)
Q Consensus 88 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg---------------~i~lwd~~~~~~~~~~~~~~~ 152 (320)
.+.+.|.++.+...++.... .-..+++ +++|+++++.+.+. .+.+.|...... ..-.+...
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~--spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~-~v~~Gk~~ 251 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDA--DYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK-AIAAGDYQ 251 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEE--CSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH-HHHHTCSE
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEE--CCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE-eccCCCee
Confidence 78899999888777765322 2233444 55789998887653 244554322110 00001111
Q ss_pred cccCCCeEEEEECcC--Cee-eeeecCCCCCeEEEEEcCCCCEEEEee-CCCeEEEEECCCCeeE---------eEEecC
Q psy14961 153 LITDDKLVNIWDMRT--GYC-VQSFEGHQSDVNSVKFHPSGDAVATGS-DDATCRLFDLRADKEV---------ACYKKD 219 (320)
Q Consensus 153 ~~~~d~~i~iwd~~~--~~~-~~~~~~~~~~v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~~---------~~~~~~ 219 (320)
.+ +.|.+.|.++ +.. +..+.. .....++.++|||++++.++ .+.++.++|+.+.+.. ......
T Consensus 252 ~i---~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 252 EL---NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp EE---TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred EE---CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence 11 4488999987 444 344432 22446899999999876555 6889999999854210 000111
Q ss_pred cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC----------CeEEEEeecCCCce-----eEEEECcCCCeEEEec-
Q psy14961 220 SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK----------CCRVNHLMGHENRV-----SCLQVSPDGTAFSSGS- 283 (320)
Q Consensus 220 ~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~----------~~~~~~~~~h~~~i-----~~i~~s~~~~~l~s~s- 283 (320)
....+..-++|+|+|...++..-+++|..||... ...+..+..|-.+- .+++++|||++|+++-
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 1223467789999994444556799999999765 44566666554432 3346689999999874
Q ss_pred --CCCc
Q psy14961 284 --WDTT 287 (320)
Q Consensus 284 --~D~~ 287 (320)
.|+.
T Consensus 408 ~skdr~ 413 (595)
T 1fwx_A 408 FSKDRF 413 (595)
T ss_dssp CCTTSS
T ss_pred CCcccc
Confidence 3554
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.79 E-value=5.6e-06 Score=67.81 Aligned_cols=182 Identities=10% Similarity=0.037 Sum_probs=115.3
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS 146 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~ 146 (320)
....+.|.. +..+.+.+.+|.|+++|+++++.+..+ . ........+.+.. +......-.++.+.++|..+.+.+.+
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence 345677763 455667777889999999999887766 2 2333333334332 23333444566777777776665554
Q ss_pred eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc---cee
Q psy14961 147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS---ILF 223 (320)
Q Consensus 147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~ 223 (320)
+. ..... ..++++++.|+.+..++.|.++|..+.+.+....-.. ...
T Consensus 132 i~---------------------------~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~ 181 (268)
T 3nok_A 132 TR---------------------------YSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVE 181 (268)
T ss_dssp EE---------------------------CSSCC---CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred Ee---------------------------CCCce---eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccc
Confidence 42 11111 2233567777777678899999999887766554321 111
Q ss_pred eeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-------------CCceeEEEECcCCCeEEEec
Q psy14961 224 GATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-------------ENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-------------~~~i~~i~~s~~~~~l~s~s 283 (320)
....+.+. +|...+....+..|.+-|..+++.+..+.-. .+..+.||++|+++.|...+
T Consensus 182 ~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 182 LINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 23456666 7876666667889999999998887665421 23669999999766555544
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.79 E-value=4.5e-06 Score=68.98 Aligned_cols=178 Identities=12% Similarity=0.064 Sum_probs=119.6
Q ss_pred eeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCC--c-----------cc--cCCCeEEEEECcCCeeee
Q psy14961 110 LMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHH--N-----------LI--TDDKLVNIWDMRTGYCVQ 172 (320)
Q Consensus 110 v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~--~-----------~~--~~d~~i~iwd~~~~~~~~ 172 (320)
...+.+. +++.++++.+. ++.|++.|+.+++.+..+.-.. . .+ ..++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~--~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYA--ENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEEC--STTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEe--CCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE
Confidence 3566664 44544444443 5789999999999887754111 0 00 146789999999998888
Q ss_pred eecCC-CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc---ceeeeEEEEEecCCcEEEEEeCCCeEEE
Q psy14961 173 SFEGH-QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS---ILFGATSVDFSVSGRLLFAGYNDYTINV 248 (320)
Q Consensus 173 ~~~~~-~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~g~~dg~v~~ 248 (320)
++..- .. ...++++|+.++.+..++.+.++|..+.+......-.. .......+.|. +|...+....++.|.+
T Consensus 101 ~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 101 NFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 87533 22 23466678777666678899999999877665554221 11124566777 7766666667889999
Q ss_pred EcCCCCeEEEEeecC-------------CCceeEEEECcCCC-eEEEecCCCceEeeec
Q psy14961 249 WDSLKCCRVNHLMGH-------------ENRVSCLQVSPDGT-AFSSGSWDTTLRDEES 293 (320)
Q Consensus 249 wd~~~~~~~~~~~~h-------------~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~ 293 (320)
-|..+++.+.++.-. ....+.|+|+|+++ +++++....++.+-+.
T Consensus 177 ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 177 ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 999998887776421 13569999999876 5666667777766554
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.79 E-value=3.3e-07 Score=78.27 Aligned_cols=245 Identities=11% Similarity=0.064 Sum_probs=142.3
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961 24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF 103 (320)
Q Consensus 24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 103 (320)
+...+.++. |..++.++.+..|| .... . ..........+.++....++ .++.++.+ +..+|. +++.+..+
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~-~---~~~~~~~~~~~~~~~~~~~g-~l~v~t~~--l~~~d~-~g~~~~~~ 93 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGS-V---KWFFKSGEIIECRPSIGKDG-TIYFGSDK--VYAINP-DGTEKWRF 93 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSC-E---EESSCGGGEEEECCEETTTT-EECCSSCE--EEEECC-CGGGGGGS
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCc-E---EEEEecCCCcccceEEecCC-cEEEecCc--EEEECC-CCcEEEEE
Confidence 445566664 55666778888887 3211 1 11122233334555554444 56666655 888886 56555444
Q ss_pred ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc--------------ccCCCeEEEEECcCCe
Q psy14961 104 HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL--------------ITDDKLVNIWDMRTGY 169 (320)
Q Consensus 104 ~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~--------------~~~d~~i~iwd~~~~~ 169 (320)
...........+. +..+..++.++.|..+|.. ++........... .+.++.+..+|.. ++
T Consensus 94 ~~~~~~~~~~~~~----~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 94 DTKKAIVSDFTIF----EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp CC-----CCEEEE----TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SC
T ss_pred ECCCCcccCceEE----CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CC
Confidence 3322222223332 3578888889999999988 6655444322111 1234678888887 66
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEE
Q psy14961 170 CVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249 (320)
Q Consensus 170 ~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~w 249 (320)
....+......+.++...+++..++.. +.+..+| .+++....+.... ..+.++.++++|. |..++.++.+..+
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~--~~~~~~~~~~~g~-l~v~t~~~gl~~~ 240 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY--WTVTRPAISEDGT-IYVTSLDGHLYAI 240 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSS--CCCSCCEECTTSC-EEEEETTTEEEEE
T ss_pred EeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCC--cceeceEECCCCe-EEEEcCCCeEEEE
Confidence 665555455567777887888755444 7789999 5655544333221 1234556677775 5556667788888
Q ss_pred cCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 250 DSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 250 d~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
|. ++..+..+......+..+.+.+++. |..++.++.+..++.
T Consensus 241 ~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 241 NP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp CT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred CC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 74 4445544544444456677777775 455677777777774
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.75 E-value=1.7e-05 Score=67.69 Aligned_cols=256 Identities=9% Similarity=-0.002 Sum_probs=135.0
Q ss_pred eEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc-c--------------cccccccCeEEEEecCCCCEEEEEeCC
Q psy14961 22 VMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK-K--------------TVATHTSFISCCIFPNSDQQILTGSGD 86 (320)
Q Consensus 22 V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~-~--------------~~~~h~~~v~~~~~~~~~~~l~s~~~d 86 (320)
-.+++++++|+++.++..++.|..|+........... . ...........+.+.+++..|+.+...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 3578899999878888888888888754211100000 0 000011235677777634466666666
Q ss_pred CeEEEEECCCcceeeecccC-c----cceeEEEEeeCC-CCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeE
Q psy14961 87 CTCALWDVESSQLLQSFHGH-T----GELMDLDLAPSE-TGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLV 160 (320)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~-~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i 160 (320)
+.+..+|..++... .+... . .....+++ .+ +|+ +.+-|.........+..........+.+
T Consensus 101 ~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~--d~~~G~----------l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 101 YHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTV--DQRTGI----------VYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp TEEEEECTTCEECE-EEESEETTEECSCEEEEEE--CTTTCC----------EEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred CCEEEEeCCCCEEE-EecccCCCCcccccceEEE--ecCCCE----------EEEECCcccccccccceehcccCCCceE
Confidence 66888887765421 11100 0 11222322 33 444 3333322100000000000000123456
Q ss_pred EEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCe--eEeEEecCcceeeeEEEEEecCCcEE
Q psy14961 161 NIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADK--EVACYKKDSILFGATSVDFSVSGRLL 237 (320)
Q Consensus 161 ~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l 237 (320)
..+|..+++......+ ....+.++++|+|+.|+.+ ..++.|..+++.... ....+.... +...++++++|.+.
T Consensus 168 ~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---gP~gi~~d~~G~l~ 243 (322)
T 2fp8_A 168 IKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---NPGNIKRNADGHFW 243 (322)
T ss_dssp EEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---SEEEEEECTTSCEE
T ss_pred EEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---CCCCeEECCCCCEE
Confidence 6666655443221111 1234579999999866544 567899999987421 111111111 14668899999877
Q ss_pred EEEeC----------CCeEEEEcCCCCeEEEEeecC----CCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 238 FAGYN----------DYTINVWDSLKCCRVNHLMGH----ENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 238 ~~g~~----------dg~v~~wd~~~~~~~~~~~~h----~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
++... .+.|..+|.. ++.+..+... ...++++++ .+++++++...+..|..++....
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred EEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 66554 4678888864 5555555433 245777777 57777787778888888886544
No 242
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.74 E-value=4.9e-06 Score=73.41 Aligned_cols=200 Identities=9% Similarity=0.037 Sum_probs=120.1
Q ss_pred EEEEEcCCCCEEEEecCC------CeEEEEEecccCCccccccccc--cc-ccCeEEEEecCCCCEEEEEe---------
Q psy14961 23 MACAYAPSGSVVASGGLD------NKVTVYAIALEDDSSAKKKTVA--TH-TSFISCCIFPNSDQQILTGS--------- 84 (320)
Q Consensus 23 ~~~~~~~~~~~l~s~~~d------g~i~v~~~~~~~~~~~~~~~~~--~h-~~~v~~~~~~~~~~~l~s~~--------- 84 (320)
..+..+|+| +++++..+ |.+.++|.... ....+.. .. ...-..++|+++.+.+++..
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~----~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF----EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC----CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC----eEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 345677999 66665444 67888876421 1112221 11 12234578899998888874
Q ss_pred ----------CCCeEEEEECCCcceeeecccC-c-cceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEE
Q psy14961 85 ----------GDCTCALWDVESSQLLQSFHGH-T-GELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQS 146 (320)
Q Consensus 85 ----------~dg~v~iwd~~~~~~~~~~~~~-~-~~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~ 146 (320)
.+.+|.+||+.+++.++.+... . .....+.|..++++++++.++. ++.|.+|....+..
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~--- 292 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW--- 292 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE---
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce---
Confidence 3689999999988877776642 1 2233455666888998887774 55787776543321
Q ss_pred eccCCccccCCCeEEEEECcCCeeeeeec-------CCCCCeEEEEEcCCCCEEEEeeC-CCeEEEEECCCC---eeEeE
Q psy14961 147 FEGHHNLITDDKLVNIWDMRTGYCVQSFE-------GHQSDVNSVKFHPSGDAVATGSD-DATCRLFDLRAD---KEVAC 215 (320)
Q Consensus 147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~v~~~p~g~~l~s~s~-dg~i~iwd~~~~---~~~~~ 215 (320)
..+.+.|+.+......+. +-......|.++|||++|+.+.. .+.|.++|+... +.+..
T Consensus 293 -----------~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~ 361 (462)
T 2ece_A 293 -----------NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGK 361 (462)
T ss_dssp -----------EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred -----------eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEE
Confidence 112233332221111110 00134567899999999866654 789999998532 33333
Q ss_pred EecCcc------------eeeeEEEEEecCCcEEEEEe
Q psy14961 216 YKKDSI------------LFGATSVDFSVSGRLLFAGY 241 (320)
Q Consensus 216 ~~~~~~------------~~~~~~~~~s~~~~~l~~g~ 241 (320)
...... ......+.++|||++|+++.
T Consensus 362 I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 362 VKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 322100 01246788999999998887
No 243
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.69 E-value=2e-05 Score=63.87 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=115.7
Q ss_pred eeeecccCccc--eeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEEEeccCCccc---------------cCCCe
Q psy14961 99 LLQSFHGHTGE--LMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGHHNLI---------------TDDKL 159 (320)
Q Consensus 99 ~~~~~~~~~~~--v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~---------------~~d~~ 159 (320)
.+..+ .|... ...+.+.. +.+..+.+.+| .|+.+|+.+++.+....-..... -.++.
T Consensus 11 v~~~~-phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEc-CCCCccccccEEEEC---CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCE
Confidence 34444 35433 33566642 44555666654 89999999999887664222110 24678
Q ss_pred EEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc---ceeeeEEEEEecCCcE
Q psy14961 160 VNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS---ILFGATSVDFSVSGRL 236 (320)
Q Consensus 160 i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~ 236 (320)
+.++|..+.+.+.++...... ..+.+++..|+.+..++.|.++|..+.+.+...+-.. .......+.+. +|..
T Consensus 87 v~v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 999999999998888754333 2334567666666668899999999887765554321 11123445544 7776
Q ss_pred EEEEeCCCeEEEEcCCCCeEEEEeec-------------CCCceeEEEECcCCCeEEEec
Q psy14961 237 LFAGYNDYTINVWDSLKCCRVNHLMG-------------HENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 237 l~~g~~dg~v~~wd~~~~~~~~~~~~-------------h~~~i~~i~~s~~~~~l~s~s 283 (320)
.+....+..|.+-|..+++.+..+.- -.+..+.||++|+++.|...+
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 66666788999999999888776641 123569999999777666555
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.64 E-value=4e-05 Score=63.31 Aligned_cols=197 Identities=10% Similarity=0.069 Sum_probs=121.7
Q ss_pred ceEEEEEcCCCCEEEEecC--CCeEEEEEecccCCcccccccc--cccccCeEEEEecCCCCEEEEEe-CCCeEEEEECC
Q psy14961 21 WVMACAYAPSGSVVASGGL--DNKVTVYAIALEDDSSAKKKTV--ATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVE 95 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~--dg~i~v~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~ 95 (320)
+...++|++++.+.++.+. ++.|.++|+.... ....+ ..+... -.+.+. ++.++.+. .++.+.++|..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~----v~~~i~l~~~~fg-eGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK----VENIHKMDDSYFG-EGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC----EEEEEECCTTCCE-EEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC----EEEEEecCCCcce-EEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 5689999998765555543 5789999875322 11121 122111 123332 44565554 57899999999
Q ss_pred CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
+.+.+..+......- ..+++ +|+.++.+..++.|.++|..+.+.+..+.-.. .++
T Consensus 95 t~~v~~~i~~g~~~g--~glt~--Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~---------------~~~------ 149 (266)
T 2iwa_A 95 TLSNIKNFTHQMKDG--WGLAT--DGKILYGSDGTSILYEIDPHTFKLIKKHNVKY---------------NGH------ 149 (266)
T ss_dssp TTEEEEEEECCSSSC--CEEEE--CSSSEEEECSSSEEEEECTTTCCEEEEEECEE---------------TTE------
T ss_pred CCcEEEEEECCCCCe--EEEEE--CCCEEEEECCCCeEEEEECCCCcEEEEEEECC---------------CCc------
Confidence 998888776331211 23444 46667666678889999988876555432000 000
Q ss_pred CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc-----------eeeeEEEEEecCCcEE-EEEeCC
Q psy14961 176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI-----------LFGATSVDFSVSGRLL-FAGYND 243 (320)
Q Consensus 176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-----------~~~~~~~~~s~~~~~l-~~g~~d 243 (320)
.-..++.+.|. +|..++....++.|.+.|..+++.+..+..... ......++|+|+++.+ +++...
T Consensus 150 -p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 150 -RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp -ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred -ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 11135678888 675556665688999999999988776653211 1134689999998755 555567
Q ss_pred CeEEEEcC
Q psy14961 244 YTINVWDS 251 (320)
Q Consensus 244 g~v~~wd~ 251 (320)
+.+..-++
T Consensus 228 ~~v~~i~l 235 (266)
T 2iwa_A 228 PKLFEIKL 235 (266)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 77777664
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.64 E-value=9.2e-05 Score=62.66 Aligned_cols=235 Identities=11% Similarity=0.019 Sum_probs=127.7
Q ss_pred cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC-C-eEEEEECCCc
Q psy14961 20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-C-TCALWDVESS 97 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g-~v~iwd~~~~ 97 (320)
.+...++++++|+++++-..++.|..++.+. . .. . ..........+.+.++++.+++.... + .|..++..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g--~-~~--~-~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG--N-QQ--I-HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC--C-EE--E-EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC--c-eE--E-EEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC
Confidence 4567899999999777776788888886532 1 11 1 11112346678888888755554332 2 4666777666
Q ss_pred ceeeeccc-CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcE-EEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 98 QLLQSFHG-HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYC-VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 98 ~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~-~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
+....... .......++. .+++..+++-..++.|..+|...+.. +....+.. ... ...
T Consensus 106 ~~~~~~~~~~~~~~~g~~~--~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~--------------~~~----~~~ 165 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITP--LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML--------------ARS----NSE 165 (306)
T ss_dssp CEEEEEECTTCSCEEEEEE--SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG--------------SCS----STT
T ss_pred eEEEEEeCCCccccCcccc--cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc--------------ccc----ccc
Confidence 64322211 1111122322 22333333333577777777654321 11110000 000 000
Q ss_pred CCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC-Cee--EeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961 176 GHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA-DKE--VACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDS 251 (320)
Q Consensus 176 ~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~ 251 (320)
+.-...+.+ +|+++.| ++-...+.|..+++.. ++. ...+... .....++++++|.++++....+.|..+|.
T Consensus 166 ~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 166 SVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp CCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred CCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 111133455 7888766 4555678999999874 221 1111111 12356789999988777777889999996
Q ss_pred CCCeEE--EEeecCCCceeEEEEC---cCCCeEEEecCCC
Q psy14961 252 LKCCRV--NHLMGHENRVSCLQVS---PDGTAFSSGSWDT 286 (320)
Q Consensus 252 ~~~~~~--~~~~~h~~~i~~i~~s---~~~~~l~s~s~D~ 286 (320)
. +... ..........++++|. ||++.|..++..+
T Consensus 241 ~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 241 D-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp T-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred C-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 5 4332 1222233568999999 8877666555433
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.60 E-value=9.2e-06 Score=76.64 Aligned_cols=217 Identities=14% Similarity=0.171 Sum_probs=134.3
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeecccCccc-eeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEEecc
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGE-LMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQSFEG 149 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~~~~ 149 (320)
+..++.++.|+.+..+|..+++.+..+...... ...+...|.-.+..++.++. ++.|..+|..+|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 567888999999999999999988766532110 00000011001346666543 58999999999988776642
Q ss_pred C---C----------------------------------------ccc---cCCC-------------------eEEEEE
Q psy14961 150 H---H----------------------------------------NLI---TDDK-------------------LVNIWD 164 (320)
Q Consensus 150 ~---~----------------------------------------~~~---~~d~-------------------~i~iwd 164 (320)
. . ..+ +.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1 0 000 0111 377788
Q ss_pred CcCCeeeeeecC--CC-------CCeEEEEEcCCCC---EEEEeeCCCeEEEEECCCCeeEeEEecCcce----------
Q psy14961 165 MRTGYCVQSFEG--HQ-------SDVNSVKFHPSGD---AVATGSDDATCRLFDLRADKEVACYKKDSIL---------- 222 (320)
Q Consensus 165 ~~~~~~~~~~~~--~~-------~~v~~v~~~p~g~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---------- 222 (320)
.++++..-.++. |. .+.....+..+|+ .++.++.+|.+.++|..+++.+...+.....
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 888887765543 22 2333333334665 6889999999999999999876433211100
Q ss_pred -----------------e-------eeEEEEEecCCcEEEEEe------------------------------------C
Q psy14961 223 -----------------F-------GATSVDFSVSGRLLFAGY------------------------------------N 242 (320)
Q Consensus 223 -----------------~-------~~~~~~~s~~~~~l~~g~------------------------------------~ 242 (320)
+ .-..++++|+..+++... .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 0 001267888877666521 2
Q ss_pred CCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 243 DYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 243 dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
+|.|..||..+++.+=+...+ .+.....+...+.+++.++.|+.++.+|.+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred cceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 378999999888776444322 233334445567788889999999999964
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.56 E-value=1.3e-05 Score=75.71 Aligned_cols=245 Identities=14% Similarity=0.151 Sum_probs=144.2
Q ss_pred CCEEEEecCCCeEEEEEecccCCcccccccccc-cccCeEE-EEecCCCCEEEEEeC------CCeEEEEECCCcceeee
Q psy14961 31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVAT-HTSFISC-CIFPNSDQQILTGSG------DCTCALWDVESSQLLQS 102 (320)
Q Consensus 31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~-h~~~v~~-~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~ 102 (320)
+..|+.++.|+.+..+|....+..... ..... ....+.+ -.. .+..++.+.. +|.|..+|..+++.+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~-~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQ-QTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEE-ECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeee-ccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 456778888999988887533222111 11000 0000110 001 1345665543 58999999999998876
Q ss_pred cccCcc------------------------------cee-EEEEeeCCCCCEEEEEeCCC-------------------e
Q psy14961 103 FHGHTG------------------------------ELM-DLDLAPSETGNTFVSGSSDK-------------------L 132 (320)
Q Consensus 103 ~~~~~~------------------------------~v~-~~~~~~~~~~~~l~s~~~dg-------------------~ 132 (320)
+..... .++ .+++ +++...++.++.++ .
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~--d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~ 271 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAY--DPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSS 271 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEE--ETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEE--cCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 642100 011 1233 33456888887766 3
Q ss_pred EEEEeCCCCcEEEEeccC--C--------c---------------c--ccCCCeEEEEECcCCeeeeeecCCC-------
Q psy14961 133 VNIWDMRTGYCVQSFEGH--H--------N---------------L--ITDDKLVNIWDMRTGYCVQSFEGHQ------- 178 (320)
Q Consensus 133 i~lwd~~~~~~~~~~~~~--~--------~---------------~--~~~d~~i~iwd~~~~~~~~~~~~~~------- 178 (320)
|..+|..+|+.+..++.. . . + ...++.++++|.++++.+...+...
T Consensus 272 v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 351 (668)
T 1kv9_A 272 ILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKV 351 (668)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEE
T ss_pred EEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccc
Confidence 999999999887666431 0 0 0 1256788999999998774332111
Q ss_pred -----CCe------------------------EEEEEcCCCCEEEEe---------------------------------
Q psy14961 179 -----SDV------------------------NSVKFHPSGDAVATG--------------------------------- 196 (320)
Q Consensus 179 -----~~v------------------------~~v~~~p~g~~l~s~--------------------------------- 196 (320)
.++ ..++++|+...++..
T Consensus 352 d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 431 (668)
T 1kv9_A 352 DLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDV 431 (668)
T ss_dssp CTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCC
T ss_pred ccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCC
Confidence 000 126788876665531
Q ss_pred ---eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCce-eEEEE
Q psy14961 197 ---SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRV-SCLQV 272 (320)
Q Consensus 197 ---s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i-~~i~~ 272 (320)
..+|.|.-||+.+++.+-.++...... ...+...+.++++|+.+|.++.||..+++.+..+....... .-+.+
T Consensus 432 p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~---~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~ 508 (668)
T 1kv9_A 432 PAAVVSGALLAWDPVKQKAAWKVPYPTHWN---GGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF 508 (668)
T ss_dssp CGGGCEEEEEEEETTTTEEEEEEEESSSCC---CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred CCCCccceEEEEeCCCCcEEEEccCCCCCc---CceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE
Confidence 134889999999998765554332211 12344568889999999999999999998887775443211 33445
Q ss_pred CcCCCe-EEEec
Q psy14961 273 SPDGTA-FSSGS 283 (320)
Q Consensus 273 s~~~~~-l~s~s 283 (320)
..+|++ ++.++
T Consensus 509 ~~~G~~yva~~~ 520 (668)
T 1kv9_A 509 ELAGRQYVAIMA 520 (668)
T ss_dssp EETTEEEEEEEE
T ss_pred EECCEEEEEEEe
Confidence 567774 44443
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.52 E-value=7e-05 Score=69.26 Aligned_cols=214 Identities=16% Similarity=0.127 Sum_probs=132.5
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeecccCcc----ceeEEEEeeCCCCCEEEEEeC------CCeEEEEeCCCCcEEEE
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTG----ELMDLDLAPSETGNTFVSGSS------DKLVNIWDMRTGYCVQS 146 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~s~~~------dg~i~lwd~~~~~~~~~ 146 (320)
+..++.++.|+.+..+|..+++.+..+..... .+.+ .|.-.+..++.++. ++.|..+|..+|+.+..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~---~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQ---APFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCS---CCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceecc---CCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 56888888999999999999998766542210 1111 11001346666655 78999999999987765
Q ss_pred eccCCc--------------------------------------------------cc---cC------------C----
Q psy14961 147 FEGHHN--------------------------------------------------LI---TD------------D---- 157 (320)
Q Consensus 147 ~~~~~~--------------------------------------------------~~---~~------------d---- 157 (320)
+..... .+ +. +
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 532110 00 00 1
Q ss_pred CeEEEEECcCCeeeeeecC--C--------CCCeEEEEEcCCCC---EEEEeeCCCeEEEEECCCCeeEeEEecCcc---
Q psy14961 158 KLVNIWDMRTGYCVQSFEG--H--------QSDVNSVKFHPSGD---AVATGSDDATCRLFDLRADKEVACYKKDSI--- 221 (320)
Q Consensus 158 ~~i~iwd~~~~~~~~~~~~--~--------~~~v~~v~~~p~g~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--- 221 (320)
+.|..+|.++++.+-.++. | ..++ -+...++|+ .++.++.+|.+..+|..+++.+..++....
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 2477888888887665532 2 1222 133334674 567888999999999999887655432210
Q ss_pred -----------e----------------ee-------eEEEEEecCCcEEEEEe--------------------------
Q psy14961 222 -----------L----------------FG-------ATSVDFSVSGRLLFAGY-------------------------- 241 (320)
Q Consensus 222 -----------~----------------~~-------~~~~~~s~~~~~l~~g~-------------------------- 241 (320)
. +. -..++++|+..++++..
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 0 00 02357888887777654
Q ss_pred -----------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 242 -----------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 242 -----------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
.+|.|..||..+++.+-++.. ...+....+...+.+++.++.|+.++.+|.++
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCC
Confidence 247889999888776644432 22232333333455667789999999999643
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.48 E-value=7.4e-05 Score=61.17 Aligned_cols=169 Identities=13% Similarity=0.134 Sum_probs=113.7
Q ss_pred eEEEEecCCCCEEEEEeCCC--eEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEe-CCCeEEEEeCCCCcEE
Q psy14961 68 ISCCIFPNSDQQILTGSGDC--TCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SDKLVNIWDMRTGYCV 144 (320)
Q Consensus 68 v~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~dg~i~lwd~~~~~~~ 144 (320)
...+.|. ++..+.+++.+| .|+.+|+.+++.+..+... .......+.+. ++.|+... .++.+.++|..+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEE
Confidence 4567777 455556666666 9999999999988776542 33333334433 45666554 5789999999999888
Q ss_pred EEeccCC-----------cccc-CCCeEEEEECcCCeeeeeecCC----C-CCeEEEEEcCCCCEEEEeeCCCeEEEEEC
Q psy14961 145 QSFEGHH-----------NLIT-DDKLVNIWDMRTGYCVQSFEGH----Q-SDVNSVKFHPSGDAVATGSDDATCRLFDL 207 (320)
Q Consensus 145 ~~~~~~~-----------~~~~-~d~~i~iwd~~~~~~~~~~~~~----~-~~v~~v~~~p~g~~l~s~s~dg~i~iwd~ 207 (320)
.++.-.. ..++ ....|.++|..+.+.+.++.-. . ..++.+.|. +|..++..-.+..|.+.|.
T Consensus 121 ~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 121 RSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp EEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECT
T ss_pred EEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEEC
Confidence 7765211 1112 2456889999888777665431 1 345678887 6766666667889999999
Q ss_pred CCCeeEeEEecCcc----------eeeeEEEEEecCCcEEEEEe
Q psy14961 208 RADKEVACYKKDSI----------LFGATSVDFSVSGRLLFAGY 241 (320)
Q Consensus 208 ~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~l~~g~ 241 (320)
.+++.+..+..... ......++++|++..|++.+
T Consensus 200 ~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 200 ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 99988776654211 11346799999887766655
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.48 E-value=0.00034 Score=57.71 Aligned_cols=222 Identities=7% Similarity=0.015 Sum_probs=124.3
Q ss_pred ccceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCC
Q psy14961 19 ATWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVES 96 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~ 96 (320)
......+++++++..|. +-...+.|..++++.... .............+.+.++++.++.+. ..+.|.+++++.
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP----TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC----EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc----EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 34567899999765554 445568899998753211 111111113456778877666666554 467999999865
Q ss_pred cceeeecccCccceeEEEEeeCCCCCEEEEEeC---CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961 97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS---DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~---dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 173 (320)
................+++.+ ++..|+.+.. .+.|..+++.... ... +
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~--~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~------------------------~-- 161 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDP--VRGNLYWTDWNRDNPKIETSHMDGTN-RRI------------------------L-- 161 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEET--TTTEEEEEECCSSSCEEEEEETTSCC-CEE------------------------E--
T ss_pred CCEEEEEECCCCCccEEEEee--CCCEEEEEECCCCCcEEEEEecCCCC-cEE------------------------E--
Confidence 432211111112344555543 3445554443 2456555543211 000 0
Q ss_pred ecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961 174 FEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~ 252 (320)
..........++++|++..| ++-...+.|..+|+............. .+..+++. .+.++++....+.|..+|..
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~---~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ---YPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC---SEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCC---CceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 00111245789999987766 455567899999987543322222111 12344443 34444444467899999998
Q ss_pred CCeEEEEeecCC-CceeEEEECcCCC
Q psy14961 253 KCCRVNHLMGHE-NRVSCLQVSPDGT 277 (320)
Q Consensus 253 ~~~~~~~~~~h~-~~i~~i~~s~~~~ 277 (320)
+++.+.++.... .....|++.|++-
T Consensus 238 ~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCceEEEccccccccceeeecCccC
Confidence 888777765433 2467888888764
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.45 E-value=9e-05 Score=60.70 Aligned_cols=188 Identities=10% Similarity=0.008 Sum_probs=116.8
Q ss_pred ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc-ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc
Q psy14961 19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT-VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS 97 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 97 (320)
..+...+.|+ ++.+..+.+.+|.|+++|+...+. ... +.... .--.+... .+...+..-.++.+.+||.++.
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv----~~~~l~~~~-FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQP----VWMERLGNI-FAEGLASD-GERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSC----SEEEECTTC-CEEEEEEC-SSCEEEEESSSCEEEEEETTTT
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcE----EeEECCCCc-ceeEEEEe-CCEEEEEEccCCEEEEEECCcC
Confidence 3467788897 466778888889999988754322 112 22110 11113332 2334444456899999999999
Q ss_pred ceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCC
Q psy14961 98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGH 177 (320)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~ 177 (320)
+.+..+... ..-+.++ + ++..|+.+..++.|.++|..+.+.+..+.-. + .+..
T Consensus 127 ~~~~ti~~~-~eGwGLt--~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~-------------~--~g~~------- 179 (268)
T 3nok_A 127 QRERTTRYS-GEGWGLC--Y--WNGKLVRSDGGTMLTFHEPDGFALVGAVQVK-------------L--RGQP------- 179 (268)
T ss_dssp EEEEEEECS-SCCCCEE--E--ETTEEEEECSSSEEEEECTTTCCEEEEEECE-------------E--TTEE-------
T ss_pred cEEEEEeCC-CceeEEe--c--CCCEEEEECCCCEEEEEcCCCCeEEEEEEeC-------------C--CCcc-------
Confidence 998888753 2223443 2 4677777777889999998887766544210 0 0111
Q ss_pred CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-----------ceeeeEEEEEecCCcEEEEEe
Q psy14961 178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS-----------ILFGATSVDFSVSGRLLFAGY 241 (320)
Q Consensus 178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~~~~l~~g~ 241 (320)
-..++.+.|. +|..++....+..|.+.|..+++.+..+.... .......++++|++..|++.+
T Consensus 180 v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 180 VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 1135667777 67666666678899999999998876665321 111346799999766544433
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.44 E-value=0.00038 Score=64.55 Aligned_cols=210 Identities=16% Similarity=0.132 Sum_probs=126.3
Q ss_pred EEEEeCCCeEEEEECCCcceeeecccCcc----ceeE-EEEeeCCCCCEEEEEe------CCCeEEEEeCCCCcEEEEec
Q psy14961 80 ILTGSGDCTCALWDVESSQLLQSFHGHTG----ELMD-LDLAPSETGNTFVSGS------SDKLVNIWDMRTGYCVQSFE 148 (320)
Q Consensus 80 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~~~l~s~~------~dg~i~lwd~~~~~~~~~~~ 148 (320)
++.++.|+.+..+|..+++.+........ .+.+ ..+. +..++.++ .++.|..+|.++|+.+..+.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~----~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV----KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE----TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE----CCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 88888999999999999998766542210 1111 1111 24666665 38999999999998876553
Q ss_pred cCCcc----------------------------------------------------c-cCC----------------Ce
Q psy14961 149 GHHNL----------------------------------------------------I-TDD----------------KL 159 (320)
Q Consensus 149 ~~~~~----------------------------------------------------~-~~d----------------~~ 159 (320)
..... + +.+ ..
T Consensus 200 ~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~s 279 (599)
T 1w6s_A 200 ATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT 279 (599)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE
T ss_pred CCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccce
Confidence 22100 0 011 36
Q ss_pred EEEEECcCCeeeeeecC--CC--------CCeEEEEEc-CCC---CEEEEeeCCCeEEEEECCCCeeEeEEecCcc----
Q psy14961 160 VNIWDMRTGYCVQSFEG--HQ--------SDVNSVKFH-PSG---DAVATGSDDATCRLFDLRADKEVACYKKDSI---- 221 (320)
Q Consensus 160 i~iwd~~~~~~~~~~~~--~~--------~~v~~v~~~-p~g---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---- 221 (320)
|..+|.++++..-.++. |. .++. +... .+| ..++.++.+|.+.++|..+++.+...+....
T Consensus 280 v~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~ 358 (599)
T 1w6s_A 280 IFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF 358 (599)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccc
Confidence 77888888887655433 21 1221 2332 567 4677789999999999999887654432110
Q ss_pred ----------e-----------------------eeeEEEEEecCCcEEEEEe---------------------------
Q psy14961 222 ----------L-----------------------FGATSVDFSVSGRLLFAGY--------------------------- 241 (320)
Q Consensus 222 ----------~-----------------------~~~~~~~~s~~~~~l~~g~--------------------------- 241 (320)
. ..-..++++|+..++++..
T Consensus 359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 0 0012356777766665532
Q ss_pred ------------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeecch
Q psy14961 242 ------------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 242 ------------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~ 295 (320)
..|.+..||..+++.+=+.. +..++..-.....+.+++.++.|+.++.+|.++
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCEEeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCC
Confidence 24678888888776553332 111222111223455677799999999998643
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.42 E-value=8.5e-05 Score=68.69 Aligned_cols=242 Identities=13% Similarity=0.124 Sum_probs=139.7
Q ss_pred CCEEEEecCCCeEEEEEecccCCcccccccccccc--cCeEE-EEecCCCCEEEEEeC------CCeEEEEECCCcceee
Q psy14961 31 GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT--SFISC-CIFPNSDQQILTGSG------DCTCALWDVESSQLLQ 101 (320)
Q Consensus 31 ~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~--~~v~~-~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~ 101 (320)
+..|+.++.|+.+..+|....+..... .+..+. ..+.+ ... .+..+++++. ++.|..+|..+++.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~--~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEV--EVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEE--ECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEe--cCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 456777778888888886433221111 111110 01111 001 1345666654 7899999999998876
Q ss_pred ecccCccc-------------------------------------e-eEEEEeeCCCCCEEEEEeCC-------------
Q psy14961 102 SFHGHTGE-------------------------------------L-MDLDLAPSETGNTFVSGSSD------------- 130 (320)
Q Consensus 102 ~~~~~~~~-------------------------------------v-~~~~~~~~~~~~~l~s~~~d------------- 130 (320)
.+...... + ..+++ +++...++.++.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~--d~~~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAY--DPKLNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEE--ETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEE--cCCCCeEEEECCCCccccCCccCCCc
Confidence 65432110 0 01222 2233566665532
Q ss_pred ---CeEEEEeCCCCcEEEEeccCC----------c--------------c---ccCCCeEEEEECcCCeeeeeecCCC--
Q psy14961 131 ---KLVNIWDMRTGYCVQSFEGHH----------N--------------L---ITDDKLVNIWDMRTGYCVQSFEGHQ-- 178 (320)
Q Consensus 131 ---g~i~lwd~~~~~~~~~~~~~~----------~--------------~---~~~d~~i~iwd~~~~~~~~~~~~~~-- 178 (320)
+.|..+|..+|+.+..++... . . ...++.+.++|.++++.+...+-..
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~ 348 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAV 348 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTC
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCc
Confidence 358899999888766553210 0 0 1235678888988888765543211
Q ss_pred -----------CCe--------------------------EEEEEcCCCCEEEEee------------------------
Q psy14961 179 -----------SDV--------------------------NSVKFHPSGDAVATGS------------------------ 197 (320)
Q Consensus 179 -----------~~v--------------------------~~v~~~p~g~~l~s~s------------------------ 197 (320)
.++ ..++++|+...++..+
T Consensus 349 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 428 (571)
T 2ad6_A 349 NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGAT 428 (571)
T ss_dssp CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred cccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccc
Confidence 111 2467888877776543
Q ss_pred -------------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCC
Q psy14961 198 -------------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHE 264 (320)
Q Consensus 198 -------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~ 264 (320)
.+|.+..||+.+++.+-.++....... ..+...+..++.++.+|.|..+|..+++.+-++....
T Consensus 429 ~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~---~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 429 LAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG---GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc---eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 357899999998887655543322211 1223346677889999999999999998887665332
Q ss_pred C-ceeEEEECcCCCeEEE
Q psy14961 265 N-RVSCLQVSPDGTAFSS 281 (320)
Q Consensus 265 ~-~i~~i~~s~~~~~l~s 281 (320)
. .-.-+.+.++|++++.
T Consensus 506 ~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 506 GGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcEeeeEEEEECCEEEEE
Confidence 1 1223446678876554
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.38 E-value=0.00039 Score=56.34 Aligned_cols=190 Identities=13% Similarity=0.074 Sum_probs=115.0
Q ss_pred CccceEEEEEcCCCCEEEEecCCC--eEEEEEecccCCcccccccccccccCeEEEEecCCCCEEE-EEeCCCeEEEEEC
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDN--KVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQIL-TGSGDCTCALWDV 94 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg--~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~ 94 (320)
+..++..+.|++ +.+..+.+.+| .|+++|+...+. .....+..+.-.. .+.. .++.|+ ..-.++.+.+||.
T Consensus 19 ~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv--~~~~~l~~~~fge-Gi~~--~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 19 TTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI--LQRAEVPPPYFGA-GIVA--WRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp TTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE--EEEEECCTTCCEE-EEEE--ETTEEEEEESSSSEEEEEET
T ss_pred CccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE--EEEEeCCCCccee-EEEE--eCCEEEEEEeeCCEEEEEEC
Confidence 346788999987 56666766654 899998753211 1111121111111 1222 234444 4456899999999
Q ss_pred CCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961 95 ESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF 174 (320)
Q Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 174 (320)
++.+.+..++... .-+.+ ++ ++..|+.+..++.|.++|..+.+.+..+.-. + .+.++
T Consensus 93 ~tl~~~~ti~~~~-~Gwgl--t~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~-------------~--~g~~~--- 149 (243)
T 3mbr_X 93 ATLTPRARFRYPG-EGWAL--TS--DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT-------------A--GGRPL--- 149 (243)
T ss_dssp TTTEEEEEEECSS-CCCEE--EE--CSSCEEEECSSSEEEEECTTTCCEEEEEECE-------------E--TTEEC---
T ss_pred CcCcEEEEEeCCC-CceEE--ee--CCCEEEEECCCCeEEEEeCCCCeEEEEEEEc-------------c--CCccc---
Confidence 9999988887533 22344 33 3566666666888999999887766544210 0 01111
Q ss_pred cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc-----------ceeeeEEEEEecCCcEEEEEe
Q psy14961 175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS-----------ILFGATSVDFSVSGRLLFAGY 241 (320)
Q Consensus 175 ~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~~~~l~~g~ 241 (320)
..++.+.+. +|..++....+..|.+.|..+++.+..+.... ..-....++++|++..|++.+
T Consensus 150 ----~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 150 ----DNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ----CCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ----ccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 234666666 56666666567899999999998877665321 111346799999877655544
No 255
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.37 E-value=4.4e-05 Score=69.70 Aligned_cols=207 Identities=9% Similarity=0.010 Sum_probs=125.8
Q ss_pred CCCEEEEEeC-CCeEEEEECCCcceeeecccC-ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961 76 SDQQILTGSG-DCTCALWDVESSQLLQSFHGH-TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNL 153 (320)
Q Consensus 76 ~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~ 153 (320)
++++++.... +..|.+.|+.+.++...+.-. ......+.+...|+++++++++....= + .+.++.+. ..
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p-~--~~dg~~l~------~~ 170 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETP-L--VNDGTNME------DV 170 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEE-S--SCSSSSTT------CG
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccc-c--CCCCcccc------cc
Confidence 5677776654 567999999998877744322 234566655322678898888643210 0 00111000 00
Q ss_pred ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC---------------------------------
Q psy14961 154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA--------------------------------- 200 (320)
Q Consensus 154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg--------------------------------- 200 (320)
-..++.+.+.|..+.+...++.--. .-..++++|+|+++++.+.+.
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred cccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 1124456677777766665554211 224567888888877776543
Q ss_pred -----eEEEEECCC--Cee-EeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCe------------EEEE
Q psy14961 201 -----TCRLFDLRA--DKE-VACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCC------------RVNH 259 (320)
Q Consensus 201 -----~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~------------~~~~ 259 (320)
.+.+.|..+ ++. +..++.. .....+.++|||+++++++ .+.+|.++|..+.. ...+
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred eeEECcEEEEeCcccCCceeEEEEecC---CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE
Confidence 355556554 222 2222211 1235688999999887765 67899999987542 2333
Q ss_pred eecCCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 260 LMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 260 ~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
. .-......++|+|||...++.--|++|-+|+....
T Consensus 327 v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a 362 (595)
T 1fwx_A 327 P-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDA 362 (595)
T ss_dssp C-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHH
T ss_pred c-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHh
Confidence 2 22346789999999976778889999999997664
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.34 E-value=0.00045 Score=64.09 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=50.6
Q ss_pred CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCC-ceeEEEECcCC
Q psy14961 198 DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHEN-RVSCLQVSPDG 276 (320)
Q Consensus 198 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~-~i~~i~~s~~~ 276 (320)
.+|.+.-||+.+++.+-..+......+ -.+...+.+++.|+.||.++.||..+++.+-++.-... ...-+.+..||
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~---g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G 527 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWG---GTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKG 527 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCS---BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccC---cceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCC
Confidence 347888899988876654433221111 11233567788899999999999999988866643322 22335666788
Q ss_pred CeE
Q psy14961 277 TAF 279 (320)
Q Consensus 277 ~~l 279 (320)
+++
T Consensus 528 ~qy 530 (599)
T 1w6s_A 528 TQY 530 (599)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.30 E-value=0.00097 Score=54.93 Aligned_cols=229 Identities=9% Similarity=0.016 Sum_probs=123.8
Q ss_pred CEEEEecCCCeEEEEEecccCCcccc-cccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccc
Q psy14961 32 SVVASGGLDNKVTVYAIALEDDSSAK-KKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGE 109 (320)
Q Consensus 32 ~~l~s~~~dg~i~v~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~ 109 (320)
.+|+.+.. +.|+.++++........ ...+.........+.+.++++.|+.+. .++.|..+++++......+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34555443 46777776532211000 001111123345778887666666555 5689999998765443322222234
Q ss_pred eeEEEEeeCCCCCEEE-EEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC
Q psy14961 110 LMDLDLAPSETGNTFV-SGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP 188 (320)
Q Consensus 110 v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p 188 (320)
...+++.+ ++..++ +-...+.|.++++...... . + ..........++++|
T Consensus 81 p~~ia~d~--~~~~lyv~d~~~~~I~~~~~~g~~~~-~---------------~-----------~~~~~~~P~~i~vd~ 131 (267)
T 1npe_A 81 PEGIALDH--LGRTIFWTDSQLDRIEVAKMDGTQRR-V---------------L-----------FDTGLVNPRGIVTDP 131 (267)
T ss_dssp EEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCE-E---------------E-----------ECSSCSSEEEEEEET
T ss_pred ccEEEEEe--cCCeEEEEECCCCEEEEEEcCCCCEE-E---------------E-----------EECCCCCccEEEEee
Confidence 45566543 334444 4444567777776432110 0 0 000112457899999
Q ss_pred CCCEEEEeeC---CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCC
Q psy14961 189 SGDAVATGSD---DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHE 264 (320)
Q Consensus 189 ~g~~l~s~s~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~ 264 (320)
++..|+.+.. .+.|..++++.... ...... ....+..++++|++..|+.+. ..+.|..+|...........+ .
T Consensus 132 ~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~-~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~ 208 (267)
T 1npe_A 132 VRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQD-NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-L 208 (267)
T ss_dssp TTTEEEEEECCSSSCEEEEEETTSCCC-EEEECT-TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-C
T ss_pred CCCEEEEEECCCCCcEEEEEecCCCCc-EEEEEC-CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-C
Confidence 7666544443 46888888764322 222111 122357789999877665554 567999999765433332322 2
Q ss_pred CceeEEEECcCCCeEEEecCCCceEeeecc
Q psy14961 265 NRVSCLQVSPDGTAFSSGSWDTTLRDEESK 294 (320)
Q Consensus 265 ~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~ 294 (320)
.....|++. ++.++++....+.|...+..
T Consensus 209 ~~P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 209 QYPFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp CSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 334567764 45556655566888888864
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.25 E-value=0.004 Score=59.87 Aligned_cols=260 Identities=8% Similarity=0.023 Sum_probs=148.9
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc--ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT--VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
+...|.++..+++|.+-+ |..++-|..|+............. -......|.++....++ .|-.|+.++-+..|+..
T Consensus 308 ~~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g-~lWiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 308 SQRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK-NLWIGTNDGGLNLYNPI 385 (795)
T ss_dssp SSSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS-CEEEEESSSCEEEECTT
T ss_pred CCCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC-CEEEEECCCCeEEEcCC
Confidence 346799999999997554 455566777765322111000000 01123457888776655 46667778789999987
Q ss_pred Ccceeeeccc--------CccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC----Cc-----------
Q psy14961 96 SSQLLQSFHG--------HTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH----HN----------- 152 (320)
Q Consensus 96 ~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~----~~----------- 152 (320)
++........ ....|.++.. +++|+.|..|+.++-|.++|..+++...-.... ..
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~--d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYV--DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEE--ETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEE--cCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC
Confidence 7654322111 1234655543 445664777888778999998876543221100 00
Q ss_pred --cccCCCeEEEEECcCCeeeeeec------CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec---Cc-
Q psy14961 153 --LITDDKLVNIWDMRTGYCVQSFE------GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK---DS- 220 (320)
Q Consensus 153 --~~~~d~~i~iwd~~~~~~~~~~~------~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~---~~- 220 (320)
.+...+-+..||..+++...... -....|.++...++|...+... + -+..||..+++. .+.. ..
T Consensus 464 ~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~ 539 (795)
T 4a2l_A 464 NLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSN 539 (795)
T ss_dssp CEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCG
T ss_pred CEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCC
Confidence 01111346677877654332211 1235789999999988666554 4 488888776554 2221 11
Q ss_pred -ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee---c-CCCceeEEEECcCCCeEEEecCCCceE
Q psy14961 221 -ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM---G-HENRVSCLQVSPDGTAFSSGSWDTTLR 289 (320)
Q Consensus 221 -~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~---~-h~~~i~~i~~s~~~~~l~s~s~D~~ir 289 (320)
....+.++..+++|.+.++ +..| +..||..+.... .+. + ..+.|.+|...++|++.+++ ..|..+
T Consensus 540 l~~~~i~~i~~d~~g~lWig-T~~G-l~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~Gl~~ 609 (795)
T 4a2l_A 540 VTKLFTNCIYEASNGIIWVG-TREG-FYCFNEKDKQIK-RYNTTNGLPNNVVYGILEDSFGRLWLST-NRGISC 609 (795)
T ss_dssp GGGSCEEEEEECTTSCEEEE-ESSC-EEEEETTTTEEE-EECGGGTCSCSCEEEEEECTTSCEEEEE-TTEEEE
T ss_pred CCCCeeEEEEECCCCCEEEE-eCCC-ceeECCCCCcEE-EeCCCCCCchhheEEEEECCCCCEEEEc-CCceEE
Confidence 1113566777888886554 4344 777887654332 222 1 13468999999999887765 345444
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.23 E-value=0.0032 Score=58.21 Aligned_cols=216 Identities=13% Similarity=0.086 Sum_probs=129.2
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeecccCcc----cee-EEEEeeC-CCCC-EEEEEe------CCCeEEEEeCCCCcE
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTG----ELM-DLDLAPS-ETGN-TFVSGS------SDKLVNIWDMRTGYC 143 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----~v~-~~~~~~~-~~~~-~l~s~~------~dg~i~lwd~~~~~~ 143 (320)
+..++.++.|+.+..+|..+++.+..+..... .+. ...+... .+|+ .+++++ .++.|..+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 56788899999999999999998866543221 111 1111111 1233 566665 378999999999987
Q ss_pred EEEeccCC-----------------------------------------------------ccc---c------------
Q psy14961 144 VQSFEGHH-----------------------------------------------------NLI---T------------ 155 (320)
Q Consensus 144 ~~~~~~~~-----------------------------------------------------~~~---~------------ 155 (320)
+....... ..+ +
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 65442210 000 0
Q ss_pred -C-------C----CeEEEEECcCCeeeeeecC--CC--------CCeEEEEEc-CCCC---EEEEeeCCCeEEEEECCC
Q psy14961 156 -D-------D----KLVNIWDMRTGYCVQSFEG--HQ--------SDVNSVKFH-PSGD---AVATGSDDATCRLFDLRA 209 (320)
Q Consensus 156 -~-------d----~~i~iwd~~~~~~~~~~~~--~~--------~~v~~v~~~-p~g~---~l~s~s~dg~i~iwd~~~ 209 (320)
. | +.|..+|.++++..-.++. |. .++. +... .+|+ .++.++.+|.+.++|..+
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 1 1 4688888889887766532 31 1221 2222 4674 678899999999999999
Q ss_pred CeeEeEEecCcce------------------------------------ee-------eEEEEEecCCcEEEEEe-----
Q psy14961 210 DKEVACYKKDSIL------------------------------------FG-------ATSVDFSVSGRLLFAGY----- 241 (320)
Q Consensus 210 ~~~~~~~~~~~~~------------------------------------~~-------~~~~~~s~~~~~l~~g~----- 241 (320)
++.+..+...... +. -..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 8876544332100 00 01345677665555433
Q ss_pred ----------------------------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 242 ----------------------------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 242 ----------------------------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.+|.|..||..+++.+=+...+ .++..-.....+.+++.|+.|+.++.+|.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 2578999998888765333322 12222112223557777999999999996
Q ss_pred c
Q psy14961 294 K 294 (320)
Q Consensus 294 ~ 294 (320)
+
T Consensus 515 ~ 515 (582)
T 1flg_A 515 K 515 (582)
T ss_dssp T
T ss_pred C
Confidence 4
No 260
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.16 E-value=0.0035 Score=55.76 Aligned_cols=238 Identities=13% Similarity=0.113 Sum_probs=127.7
Q ss_pred eEEEEEcCC--CCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCC-----eEEEEEC
Q psy14961 22 VMACAYAPS--GSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDC-----TCALWDV 94 (320)
Q Consensus 22 V~~~~~~~~--~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~ 94 (320)
-..++++|+ +..|..+...+.|+.++.... ....+.........+.+.++++ |+.+...+ .+...+.
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g-----~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ-----YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTT-----EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCC-----EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 357889985 334444444477888876311 1112222334467888999888 55554321 1233332
Q ss_pred CCccee-eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961 95 ESSQLL-QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 95 ~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 173 (320)
..+... ..+. .......+++.+. +|.+.++-..++.|+.+|..++.....+ ...
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~-~G~lyv~d~~~~~V~~~d~~~g~~~~~~---------------~~~-------- 269 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQ-NGKIYYTRYHHAMISSYDPATGTLTEEE---------------VMM-------- 269 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTT-TCCEEECBTTCSEEEEECTTTCCEEEEE---------------EEC--------
T ss_pred CCCeecccccc-ccCCCCEEEEeCC-CCeEEEEECCCCEEEEEECCCCeEEEEE---------------ecc--------
Confidence 221110 1111 1111223444321 4555445455667777777655432111 000
Q ss_pred ecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC--Cee--EeEEecC-------------cceeeeEEEEE-----
Q psy14961 174 FEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA--DKE--VACYKKD-------------SILFGATSVDF----- 230 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~--~~~--~~~~~~~-------------~~~~~~~~~~~----- 230 (320)
+....-..++|+|+|++| ++-...+.|..++++. +.. ...+... .....+..+++
T Consensus 270 --~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~ 347 (433)
T 4hw6_A 270 --DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEA 347 (433)
T ss_dssp --SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGG
T ss_pred --CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccc
Confidence 001122469999999955 5555678899988653 211 0011110 01122456888
Q ss_pred ----ecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC------------------CCceeEEEEC-cCCCeEEEecCCCc
Q psy14961 231 ----SVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH------------------ENRVSCLQVS-PDGTAFSSGSWDTT 287 (320)
Q Consensus 231 ----s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h------------------~~~i~~i~~s-~~~~~l~s~s~D~~ 287 (320)
.++|.+.++-...+.|+.++. .+ .+.++.+. -.....|+++ ++|.++++-..+..
T Consensus 348 y~~dd~~g~lyvaD~~n~~I~~~~~-~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r 425 (433)
T 4hw6_A 348 YAGEEDEYDFYFCDRDSHTVRVLTP-EG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHR 425 (433)
T ss_dssp GTTSSCCEEEEEEETTTTEEEEECT-TS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred ccccCCCCcEEEEECCCCEEEEECC-CC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCE
Confidence 677777777677889999985 34 33333321 1236789999 68888888788888
Q ss_pred eEeeecc
Q psy14961 288 LRDEESK 294 (320)
Q Consensus 288 ir~~~~~ 294 (320)
||..+.+
T Consensus 426 Ir~i~~e 432 (433)
T 4hw6_A 426 VRKIAPE 432 (433)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 9887754
No 261
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=0.0021 Score=57.09 Aligned_cols=237 Identities=11% Similarity=0.086 Sum_probs=126.0
Q ss_pred eEEEEEcC-CCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCC-C----eEEEEECC
Q psy14961 22 VMACAYAP-SGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-C----TCALWDVE 95 (320)
Q Consensus 22 V~~~~~~~-~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g----~v~iwd~~ 95 (320)
-..++++| ++..|..+...+.|+.+|+... . ...+.........+.+.++++.|+.+... + .+...+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~--~---v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE--Y---VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTT--E---EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCC--E---EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 35788998 3555665555467777776321 1 11222233445678899988867766542 1 23334432
Q ss_pred Cccee--eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961 96 SSQLL--QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 96 ~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 173 (320)
+... ..+.. ......+++.+. +|.++++-..++.|..++...+.... + ..
T Consensus 214 -g~~~~~~~l~~-~~~p~giavdp~-~g~lyv~d~~~~~V~~~~~~~~~~~~----------------~---------~~ 265 (430)
T 3tc9_A 214 -SGFKVITELTK-GQNCNGAETHPI-NGELYFNSWNAGQVFRYDFTTQETTP----------------L---------FT 265 (430)
T ss_dssp -GTSCSEEEEEE-CSSCCCEEECTT-TCCEEEEETTTTEEEEEETTTTEEEE----------------E---------EE
T ss_pred -Cceeeeeeecc-CCCceEEEEeCC-CCEEEEEECCCCEEEEEECCCCcEEE----------------E---------EE
Confidence 2221 11111 112234444332 45555555556677777765433210 0 01
Q ss_pred ecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC--Cee--EeEEecC-------------cceeeeE-EEEEe---
Q psy14961 174 FEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA--DKE--VACYKKD-------------SILFGAT-SVDFS--- 231 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~--~~~--~~~~~~~-------------~~~~~~~-~~~~s--- 231 (320)
.. ....-..++|+|+|++| ++-..++.|..++.+. ++. ...+... ....... .+.+.
T Consensus 266 ~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~ 344 (430)
T 3tc9_A 266 IQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPA 344 (430)
T ss_dssp CS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGG
T ss_pred cC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccc
Confidence 11 11234689999999955 5555678899987653 211 1111110 0011122 34443
Q ss_pred -----cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC------------------CCceeEEEECc-CCCeEEEecCCCc
Q psy14961 232 -----VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH------------------ENRVSCLQVSP-DGTAFSSGSWDTT 287 (320)
Q Consensus 232 -----~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h------------------~~~i~~i~~s~-~~~~l~s~s~D~~ 287 (320)
++|.+.++=...+.|+.++. .+. +.++.+. -.....|+++| ++.++++-..+..
T Consensus 345 y~~~D~~g~lyvaD~~n~~I~~i~~-~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~r 422 (430)
T 3tc9_A 345 YKGSSDEYDFYFCDRENHCIRILTP-QGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRR 422 (430)
T ss_dssp GTTSSCCEEEEEEEGGGTEEEEECT-TSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTE
T ss_pred ccccCCCCeEEEEECCCcEEEEECC-CCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCe
Confidence 34555566566778999884 343 3233221 12478999999 5777887777888
Q ss_pred eEeeecc
Q psy14961 288 LRDEESK 294 (320)
Q Consensus 288 ir~~~~~ 294 (320)
||..+.+
T Consensus 423 Ir~i~~e 429 (430)
T 3tc9_A 423 IRKIGYE 429 (430)
T ss_dssp EEEEEEC
T ss_pred EEEEccC
Confidence 8877654
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.08 E-value=0.0014 Score=55.41 Aligned_cols=115 Identities=10% Similarity=0.003 Sum_probs=74.8
Q ss_pred CeEEEEEcCCCCEEEEeeCC-CeEEEEECCCCeeEeEEec---CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961 180 DVNSVKFHPSGDAVATGSDD-ATCRLFDLRADKEVACYKK---DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC 255 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~d-g~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~ 255 (320)
..+.++..++|+..++++.. +.|..++.+.......+.. .....+.+.++++|+|..|++....|.+.-+|+....
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv 217 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY 217 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc
Confidence 47889999999999988887 8887777664422222211 1122446688999999988888779999999977533
Q ss_pred E--EEEee--cC---CCceeEE-EECcCCCe-EEEecCCCceEeeecch
Q psy14961 256 R--VNHLM--GH---ENRVSCL-QVSPDGTA-FSSGSWDTTLRDEESKN 295 (320)
Q Consensus 256 ~--~~~~~--~h---~~~i~~i-~~s~~~~~-l~s~s~D~~ir~~~~~~ 295 (320)
. +. .. +. -.....| .--.+|+. |++.+..+.+.+.....
T Consensus 218 ~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 218 AWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ceeec-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 2 21 11 21 1233443 44457777 67776777766666555
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.08 E-value=0.0011 Score=56.33 Aligned_cols=186 Identities=12% Similarity=0.099 Sum_probs=106.7
Q ss_pred EEEEecCCCCEEEEEeCCCeEEEEECCCcceeeeccc--------------------CccceeEEEEeeCCCCCEEEEEe
Q psy14961 69 SCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHG--------------------HTGELMDLDLAPSETGNTFVSGS 128 (320)
Q Consensus 69 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~~~l~s~~ 128 (320)
..+.+.+++..++++..++.|..|+..++... .+.. .......+++.+. ++ .|+.+.
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~-~g-~l~v~d 98 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ-NN-QLYIVD 98 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT-TT-EEEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCC-CC-cEEEEE
Confidence 34667777777888888999999998765432 1110 0123455555321 34 455555
Q ss_pred CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeC---------
Q psy14961 129 SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSD--------- 198 (320)
Q Consensus 129 ~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~--------- 198 (320)
..+.|..+|..++.. ..+.. ...+. .....+.+++.| +|+..++-..
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~---------------~~~~~-------~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLAT---------------SVDGV-------PFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEES---------------EETTE-------ECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred CCCCEEEEeCCCCEE-EEecc---------------cCCCC-------cccccceEEEecCCCEEEEECCcccccccccc
Confidence 555577777654321 11100 00000 112357799999 8887666432
Q ss_pred --------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCCCe--EEEEeecCCCce
Q psy14961 199 --------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLKCC--RVNHLMGHENRV 267 (320)
Q Consensus 199 --------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~~--~~~~~~~h~~~i 267 (320)
++.+..+|..+++....... ......++++|+|+.|+.+ +..+.|..|+..... ....+....+ .
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P 231 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-P 231 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEEEEE---ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-E
T ss_pred eehcccCCCceEEEEeCCCCEEEEeccC---CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-C
Confidence 36788888876653222111 1224568899999876665 456889999865310 1111111223 7
Q ss_pred eEEEECcCCCeEEEecC
Q psy14961 268 SCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 268 ~~i~~s~~~~~l~s~s~ 284 (320)
..|++.++|++.++...
T Consensus 232 ~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEEECTTSCEEEEEEE
T ss_pred CCeEECCCCCEEEEecC
Confidence 88999999998777644
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.04 E-value=0.01 Score=56.86 Aligned_cols=263 Identities=7% Similarity=-0.002 Sum_probs=143.8
Q ss_pred CccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccc-----cccccccCeEEEEecCCCCEEEEEeCCCeEEEE
Q psy14961 18 PATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK-----TVATHTSFISCCIFPNSDQQILTGSGDCTCALW 92 (320)
Q Consensus 18 ~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 92 (320)
+...|.++..+++|.+-+ |..++-|..++............ ........|.++....++ .|..|+.++-+..|
T Consensus 311 ~~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLWIGTDGGGINVF 388 (781)
T ss_dssp SSSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-CEEEEEBSSCEEEE
T ss_pred CCCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-CEEEEeCCCcEEEE
Confidence 456789999999987544 44455677776532111100000 001123457787776655 46666766678889
Q ss_pred ECCCcceeeec---ccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEecc--CCc-------------cc
Q psy14961 93 DVESSQLLQSF---HGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEG--HHN-------------LI 154 (320)
Q Consensus 93 d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~--~~~-------------~~ 154 (320)
+..++...... ......|.++. .+++|. |..|+.++-+..+|..+++....... ... .+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~--~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSL--KDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEE--ECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred ECCCCeEEEccCCCCCCCcceEEEE--ECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE
Confidence 98765432211 11224455553 355554 55577767788888876643221110 000 01
Q ss_pred cCCCeEEEEECcCCeeeeeecCC-----CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcc--eeeeEE
Q psy14961 155 TDDKLVNIWDMRTGYCVQSFEGH-----QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSI--LFGATS 227 (320)
Q Consensus 155 ~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~ 227 (320)
...+-+..+|..+++........ ...|.++...++|...+....+| +..+|..+++. ..+..... ...+.+
T Consensus 466 gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~ 543 (781)
T 3v9f_A 466 GTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-RKFNQYEGFCSNTINQ 543 (781)
T ss_dssp EETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-EEECTTTTCSCSCEEE
T ss_pred EECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-EEccCCCCCCCCeeEE
Confidence 11244667777665432221111 35789999999888665443344 77788766543 23322111 112456
Q ss_pred EEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee---c-CCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961 228 VDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM---G-HENRVSCLQVSPDGTAFSSGSWDTTLRD 290 (320)
Q Consensus 228 ~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~---~-h~~~i~~i~~s~~~~~l~s~s~D~~ir~ 290 (320)
+..+++|.+.+ |+.+|-+..||..+... ..+. + ....|.++...++|++.+++ .+|..++
T Consensus 544 i~~d~~g~lWi-~T~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~Gl~~~ 607 (781)
T 3v9f_A 544 IYRSSKGQMWL-ATGEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST-NTGISCY 607 (781)
T ss_dssp EEECTTSCEEE-EETTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC-SSCEEEE
T ss_pred EEECCCCCEEE-EECCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc-CCceEEE
Confidence 77778887554 44466558888665432 2222 1 13468899999999877654 4554443
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.04 E-value=0.0055 Score=53.57 Aligned_cols=196 Identities=7% Similarity=-0.008 Sum_probs=109.0
Q ss_pred cCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEE
Q psy14961 66 SFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCV 144 (320)
Q Consensus 66 ~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~ 144 (320)
.....+.|.+.++.|+.+. ..+.|..++++.......+.........+++.+. .++++++-...+.|.+.++......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~-~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETT-TTEEEEEETTTTEEEECBTTSCSCE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeC-CCeEEEEcCCCCeEEEEeCCCCceE
Confidence 3456788876666666554 5678999998765433222211122334555432 2333333344455555554322100
Q ss_pred EEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCC-CeEEEEECCCCeeEeEEecCcce
Q psy14961 145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDD-ATCRLFDLRADKEVACYKKDSIL 222 (320)
Q Consensus 145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~d-g~i~iwd~~~~~~~~~~~~~~~~ 222 (320)
..+.........++++|.+..|+.+ ..+ +.|...+++.......... ..
T Consensus 195 ---------------------------~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~--~~ 245 (386)
T 3v65_B 195 ---------------------------VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT--HL 245 (386)
T ss_dssp ---------------------------EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS--SC
T ss_pred ---------------------------EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC--CC
Confidence 0011122345789999976665444 344 7888888875433222211 12
Q ss_pred eeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 223 FGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 223 ~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.....++|+|++..|+.+. ..+.|..+|.....+...+.........|++ ..+.++++....+.|+..+
T Consensus 246 ~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 246 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 2356799998777666654 5678999987543322222223345678888 4566777777778887776
No 266
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.02 E-value=0.012 Score=56.65 Aligned_cols=259 Identities=9% Similarity=0.055 Sum_probs=146.4
Q ss_pred ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccc---ccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKK---KTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
...|.++..+++|.+.+.. .+| +.+|+........... .........|.++....++. |-.|+.++-|..|+..
T Consensus 262 ~~~i~~i~~d~~g~lWigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGT-FND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEEEEE-SSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEEEEe-CCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 4679999999999866554 344 7777753211000000 00111235688888776664 6667777788899876
Q ss_pred Ccceeeecc------cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEec--------------------c
Q psy14961 96 SSQLLQSFH------GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFE--------------------G 149 (320)
Q Consensus 96 ~~~~~~~~~------~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~--------------------~ 149 (320)
++....... .....|.++ ..+++|+ |-.|+.++-|..||..++....-.. .
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i--~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~ 415 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCI--VEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE 415 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEE--EECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET
T ss_pred cccceEEcCCCCCCCCCCCeeEEE--EECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC
Confidence 554321111 012345554 3455554 6667777778889887654322110 0
Q ss_pred CCc--cc-cCCCeEEEEECcCCeeeeeec----CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC---
Q psy14961 150 HHN--LI-TDDKLVNIWDMRTGYCVQSFE----GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD--- 219 (320)
Q Consensus 150 ~~~--~~-~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--- 219 (320)
... .+ +.++-+..+|..+++...... .....|.++...++|...+... + -+.+||..+++... +...
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~-~~~~~~~ 492 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTT-IEKEKDG 492 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEE-CCBCTTC
T ss_pred CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEE-ccccccc
Confidence 111 11 233557778877654332211 1345789999999888665544 4 48889987664322 2211
Q ss_pred -c-ceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEee-------cCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961 220 -S-ILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLM-------GHENRVSCLQVSPDGTAFSSGSWDTTLRD 290 (320)
Q Consensus 220 -~-~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~-------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~ 290 (320)
. ....+.++..+++|.+.+... .| +..||..+... .+. .+...|.+|...++|++.++.. .|.. .
T Consensus 493 ~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~-~ 566 (795)
T 4a2l_A 493 TPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EGFY-C 566 (795)
T ss_dssp CBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SCEE-E
T ss_pred cccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CCce-e
Confidence 0 012356677788887665544 44 77787655443 221 1245799999999998766544 3544 4
Q ss_pred ee
Q psy14961 291 EE 292 (320)
Q Consensus 291 ~~ 292 (320)
++
T Consensus 567 ~d 568 (795)
T 4a2l_A 567 FN 568 (795)
T ss_dssp EE
T ss_pred EC
Confidence 44
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.02 E-value=0.0015 Score=60.44 Aligned_cols=188 Identities=15% Similarity=0.145 Sum_probs=107.8
Q ss_pred CeEEEEECCCcceeeeccc--Ccc----ceeEEEEee--CCCCC---EEEEEeCCCeEEEEeCCCCcEEEEeccCCcccc
Q psy14961 87 CTCALWDVESSQLLQSFHG--HTG----ELMDLDLAP--SETGN---TFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLIT 155 (320)
Q Consensus 87 g~v~iwd~~~~~~~~~~~~--~~~----~v~~~~~~~--~~~~~---~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~ 155 (320)
+.|..+|+.+++.+..++. |.. .+....+.. ..+|+ .++.++.+|.+.++|..+|+.+..+......-
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~- 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT- 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC-
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc-
Confidence 5899999999998877643 211 011111111 13563 78889999999999999999887654332100
Q ss_pred CCCeEEEEECcCCeeee--------------------eecCCCC--CeEEEEEcCCCCEEEEee----------------
Q psy14961 156 DDKLVNIWDMRTGYCVQ--------------------SFEGHQS--DVNSVKFHPSGDAVATGS---------------- 197 (320)
Q Consensus 156 ~d~~i~iwd~~~~~~~~--------------------~~~~~~~--~v~~v~~~p~g~~l~s~s---------------- 197 (320)
...-.|+.+++++. ..++... .-..++++|+...++...
T Consensus 370 ---~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 446 (582)
T 1flg_A 370 ---WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTK 446 (582)
T ss_dssp ---SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCT
T ss_pred ---ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccC
Confidence 01111222222211 0010000 012456666544443322
Q ss_pred -----------------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEe
Q psy14961 198 -----------------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHL 260 (320)
Q Consensus 198 -----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~ 260 (320)
.+|.|.-||+.+++.+-.++....... ..+...+.+++.|+.||.++.||..+++.+-++
T Consensus 447 g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~---g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 447 GSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWA---GVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp TSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCS---CCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcc---cceEeCCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence 368899999999887655443322111 112234677888999999999999999888776
Q ss_pred ecCCCce-eEEEECcCCCeEEE
Q psy14961 261 MGHENRV-SCLQVSPDGTAFSS 281 (320)
Q Consensus 261 ~~h~~~i-~~i~~s~~~~~l~s 281 (320)
......+ .-+.|..||++++.
T Consensus 524 ~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 524 QTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ECSSCCCSCCEEEEETTEEEEE
T ss_pred cCCCCcccCceEEEECCEEEEE
Confidence 5433222 23677788885443
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.00 E-value=0.006 Score=52.53 Aligned_cols=195 Identities=7% Similarity=0.001 Sum_probs=109.7
Q ss_pred CeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEE
Q psy14961 67 FISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQ 145 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~ 145 (320)
....+.|.+.++.|+.+. ..+.|..++++.......+.........+++.+. .++...+-...+.|.+.++......
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG~~~~- 151 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV-HDKLYWTDSGTSRIEVANLDGAHRK- 151 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecC-CCeEEEEcCCCCeEEEEcCCCCceE-
Confidence 356788876666666554 5688998998765433322211223344555432 2333344444556666665432110
Q ss_pred EeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCC-CeEEEEECCCCeeEeEEecCccee
Q psy14961 146 SFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDD-ATCRLFDLRADKEVACYKKDSILF 223 (320)
Q Consensus 146 ~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~d-g~i~iwd~~~~~~~~~~~~~~~~~ 223 (320)
..+.........++++|.+..| .+-..+ +.|...+++......... . ...
T Consensus 152 --------------------------~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~-~~~ 203 (349)
T 3v64_C 152 --------------------------VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-T-HLF 203 (349)
T ss_dssp --------------------------EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-S-SCS
T ss_pred --------------------------EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-C-CCC
Confidence 0011122345789999966555 444444 788888887543221111 1 122
Q ss_pred eeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 224 GATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.+..++++|++..|+.+. ..+.|..+|.....+...+.........|++ ..+.++++-...+.|...+
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEE
Confidence 357899998777666654 5678999986543322222223345678888 4566677766677777766
No 269
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.97 E-value=0.0047 Score=50.55 Aligned_cols=209 Identities=10% Similarity=0.120 Sum_probs=120.8
Q ss_pred ccccccCeEEEEecCCCCEEE-EEeCCCeEEEEECCCcceeeecccC-ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeC
Q psy14961 61 VATHTSFISCCIFPNSDQQIL-TGSGDCTCALWDVESSQLLQSFHGH-TGELMDLDLAPSETGNTFVSGSSDKLVNIWDM 138 (320)
Q Consensus 61 ~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~ 138 (320)
+.+-...+..+.+.++++.|+ +...++.|...|+. ++.+..+... ......+++ ..++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~--~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEY--IGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEE--CSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEE--eCCCEEEEEECCCCcEEEEEc
Confidence 334445688889987766655 47778899999987 7777665421 134455555 345555555445667777776
Q ss_pred CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC---CeeEeE
Q psy14961 139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA---DKEVAC 215 (320)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~---~~~~~~ 215 (320)
.....+.. +....+. .. ..........++|+|.++.|.++.+.....+|.++. ...+..
T Consensus 99 ~~~~~i~~-------------~~~~~~~----~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i 160 (255)
T 3qqz_A 99 TPNSEVKI-------------LKKIKIP----LQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHI 160 (255)
T ss_dssp CTTCCEEE-------------EEEEECC----CS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEE
T ss_pred CCCCeeee-------------eeeeccc----cc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceee
Confidence 44321110 0001000 00 011344568999999998887777655555665531 111222
Q ss_pred Eec-----CcceeeeEEEEEecCC-cEEEEEeCCCeEEEEcCCCCeEEEEe--e-cC------CCceeEEEECcCCCeEE
Q psy14961 216 YKK-----DSILFGATSVDFSVSG-RLLFAGYNDYTINVWDSLKCCRVNHL--M-GH------ENRVSCLQVSPDGTAFS 280 (320)
Q Consensus 216 ~~~-----~~~~~~~~~~~~s~~~-~~l~~g~~dg~v~~wd~~~~~~~~~~--~-~h------~~~i~~i~~s~~~~~l~ 280 (320)
... .........++++|.. .+++....+..+..+|.... .+..+ . +. -..-..|+|.++|++++
T Consensus 161 ~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 161 SKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp EECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE
T ss_pred ecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEE
Confidence 111 1122356789999865 46666677888999996643 44333 2 11 12568999999999777
Q ss_pred EecCCCceEeee
Q psy14961 281 SGSWDTTLRDEE 292 (320)
Q Consensus 281 s~s~D~~ir~~~ 292 (320)
+ |.-..+..+.
T Consensus 240 v-sE~n~~y~f~ 250 (255)
T 3qqz_A 240 V-SEPNRFYRFT 250 (255)
T ss_dssp E-ETTTEEEEEE
T ss_pred E-cCCceEEEEE
Confidence 6 4444444443
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.94 E-value=0.0011 Score=62.47 Aligned_cols=235 Identities=12% Similarity=0.078 Sum_probs=117.6
Q ss_pred eEeecccceeEE--EEEeC-ccceEEEEEcCCCCEEEEecC-CCeEEEEEecccCCcccccccccccccCeEEEEecCCC
Q psy14961 2 IIWDGLTQTKEH--SVTMP-ATWVMACAYAPSGSVVASGGL-DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSD 77 (320)
Q Consensus 2 ~~W~~~~~~~~~--~~~~~-~~~V~~~~~~~~~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 77 (320)
.+||..+++-.. ....+ .....++++..++++++.||. +..+.+||... ........+...... .++...+++
T Consensus 222 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t--~~W~~~~~~~~~R~~-~s~~~~~dg 298 (656)
T 1k3i_A 222 SSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS--DSWIPGPDMQVARGY-QSSATMSDG 298 (656)
T ss_dssp EEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG--TEEEECCCCSSCCSS-CEEEECTTS
T ss_pred EEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcC--CceeECCCCCccccc-cceEEecCC
Confidence 367777665221 22111 223345678899999999884 45788888753 222222222221111 223334577
Q ss_pred CEEEEEe-CC-----CeEEEEECCCcceeee-----cccCccceeEEEEeeCCCCCEEEEEeCC---------CeEEEEe
Q psy14961 78 QQILTGS-GD-----CTCALWDVESSQLLQS-----FHGHTGELMDLDLAPSETGNTFVSGSSD---------KLVNIWD 137 (320)
Q Consensus 78 ~~l~s~~-~d-----g~v~iwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~l~s~~~d---------g~i~lwd 137 (320)
+.++.|+ .+ ..+.+||+.++..... .......-. .....++..++.++.+ ..+..||
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~---~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd 375 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ---GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY 375 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT---GGGTTTCSCCEEECGGGCEEECCSSSEEEEEE
T ss_pred eEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc---ceeecCCceEEEECCCCcEEEecCccceeeee
Confidence 8888888 34 5789999987653321 000000000 0011233444444433 3567788
Q ss_pred CCCCcEEEEeccC------------Cccc---cCCC---------------------eEEEEECcCCeeeeee--cCCCC
Q psy14961 138 MRTGYCVQSFEGH------------HNLI---TDDK---------------------LVNIWDMRTGYCVQSF--EGHQS 179 (320)
Q Consensus 138 ~~~~~~~~~~~~~------------~~~~---~~d~---------------------~i~iwd~~~~~~~~~~--~~~~~ 179 (320)
..+.......... ...+ ..++ .+.+||..+..-.... ..+..
T Consensus 376 ~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~ 455 (656)
T 1k3i_A 376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA 455 (656)
T ss_dssp CSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC
T ss_pred cCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC
Confidence 7665432211000 0000 0011 4556666554322221 11222
Q ss_pred C-eEEEEEcCCCCEEEEeeCC-----------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961 180 D-VNSVKFHPSGDAVATGSDD-----------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN 242 (320)
Q Consensus 180 ~-v~~v~~~p~g~~l~s~s~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~ 242 (320)
. -.++...|+|+.++.|+.+ ..+.+||..+.+=...-...........+.+.|+|++++.|+.
T Consensus 456 R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 456 RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 2 2355677899999999854 4689999876542111111111112234456789999999885
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.87 E-value=0.0089 Score=51.05 Aligned_cols=200 Identities=15% Similarity=0.241 Sum_probs=112.2
Q ss_pred CCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEE----ecCCCC---EEEEEeC---CCeEEEEEC--CC
Q psy14961 29 PSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCI----FPNSDQ---QILTGSG---DCTCALWDV--ES 96 (320)
Q Consensus 29 ~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~----~~~~~~---~l~s~~~---dg~v~iwd~--~~ 96 (320)
|..+++++..+.+-+.+||+... ....+.. +.+..+. |...++ .+++..+ +++|++|++ .+
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G~-----~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDGK-----MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTSC-----EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred CCccEEEEEcCCCCEEEEcCCCc-----EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 35567777777888999998421 1222221 1222222 222232 2344444 479999966 33
Q ss_pred cceeeeccc------Cc-cceeEEEEeeCC-CCC-EEEEEeCCCeEEEEeCC---CCcEEEEeccCCccccCCCeEEEEE
Q psy14961 97 SQLLQSFHG------HT-GELMDLDLAPSE-TGN-TFVSGSSDKLVNIWDMR---TGYCVQSFEGHHNLITDDKLVNIWD 164 (320)
Q Consensus 97 ~~~~~~~~~------~~-~~v~~~~~~~~~-~~~-~l~s~~~dg~i~lwd~~---~~~~~~~~~~~~~~~~~d~~i~iwd 164 (320)
+. +..+.. .. ..++.+++.-++ .+. +++....+|.+..|++. .+..
T Consensus 111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~--------------------- 168 (355)
T 3amr_A 111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI--------------------- 168 (355)
T ss_dssp CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE---------------------
T ss_pred Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc---------------------
Confidence 33 333311 11 456667773333 333 67788888988888872 2211
Q ss_pred CcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCC-----CeeEeEEecCcceeeeEEEEE--ecCCc-E
Q psy14961 165 MRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRA-----DKEVACYKKDSILFGATSVDF--SVSGR-L 236 (320)
Q Consensus 165 ~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~--s~~~~-~ 236 (320)
+.+.+.++.- ...+..+...+....|+.+-++.-|..++.+. .+.+...........+..+++ .++++ +
T Consensus 169 --~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gy 245 (355)
T 3amr_A 169 --SGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGY 245 (355)
T ss_dssp --EEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEE
T ss_pred --cceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEE
Confidence 1122333321 23577888898888999999987776667542 333433322222223455555 45666 6
Q ss_pred EEEEe-CCCeEEEEcCC-CCeEEEEe
Q psy14961 237 LFAGY-NDYTINVWDSL-KCCRVNHL 260 (320)
Q Consensus 237 l~~g~-~dg~v~~wd~~-~~~~~~~~ 260 (320)
|++++ .+.+..+||.. +.+.+..|
T Consensus 246 LivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 246 LMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 76666 56799999986 55566665
No 272
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=0.023 Score=54.49 Aligned_cols=259 Identities=12% Similarity=0.038 Sum_probs=139.3
Q ss_pred ccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc-----ccccccCeEEEEecCCCCEEEEEeCCCeEEEEE
Q psy14961 19 ATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT-----VATHTSFISCCIFPNSDQQILTGSGDCTCALWD 93 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 93 (320)
...|.++..+++|.+.+... . -+.+|+.... ....... .......|.++....++ .|..|...+-+.++|
T Consensus 210 ~~~i~~i~~d~~g~lwigt~-~-Gl~~~d~~~~--~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~lWigt~~~Gl~~~~ 284 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWIGTS-K-GLALFNANTE--TFTNFHNNPGNIHGALSSYIFSIKQLKDN-KLWIATELNGIMILD 284 (781)
T ss_dssp CSSEEEEEECTTCCEEEEET-T-EEEEEETTTT--EEEC-----------CCCCEEEEEECTTS-EEEEEESSSCEEEEE
T ss_pred CCceeEEEEcCCCCEEEEeC-C-cHheECCCCC--cEEEEEcCCCccccccCceEEEEEECCCC-CEEEEeCCCCeEEEC
Confidence 45788998899988666543 3 5778875321 1111000 01123567787776655 566677656688889
Q ss_pred CCCcceeeecc--------------cCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE-------------
Q psy14961 94 VESSQLLQSFH--------------GHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS------------- 146 (320)
Q Consensus 94 ~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~------------- 146 (320)
..++....... .....|.++ ..+.+|. |-.|+.++-|..++...+.....
T Consensus 285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i--~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (781)
T 3v9f_A 285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYI--FQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLS 361 (781)
T ss_dssp TTCC---------CEEECBCSSTTSBSSSCEEEE--EECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCS
T ss_pred CCCCeeeeeeccccccccCCCCCCCCCCCeEEEE--EEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCC
Confidence 87654321111 122345554 3455554 66777667788888765432111
Q ss_pred ------ec--cCC-cc-ccCCCeEEEEECcCCeeeeee---cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961 147 ------FE--GHH-NL-ITDDKLVNIWDMRTGYCVQSF---EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV 213 (320)
Q Consensus 147 ------~~--~~~-~~-~~~d~~i~iwd~~~~~~~~~~---~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~ 213 (320)
+. ... .. .+.++-+..+|..++...... ......|.++...++|...+ |+.++-+..+|..+++..
T Consensus 362 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred CcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence 00 000 00 122344666776543322111 11335688999888887555 666667888888765432
Q ss_pred eEEecC-cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC-----CCceeEEEECcCCCeEEEecCCCc
Q psy14961 214 ACYKKD-SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH-----ENRVSCLQVSPDGTAFSSGSWDTT 287 (320)
Q Consensus 214 ~~~~~~-~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h-----~~~i~~i~~s~~~~~l~s~s~D~~ 287 (320)
.+... .....+.++...++|.+.+ |+. +-+..||..+.......... ...|.+|...++|++.+....+|.
T Consensus 441 -~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl 517 (781)
T 3v9f_A 441 -IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGV 517 (781)
T ss_dssp -ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCE
T ss_pred -EeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCE
Confidence 22211 1112345666677776544 455 45888886654322211111 467999999999987665443554
Q ss_pred eE
Q psy14961 288 LR 289 (320)
Q Consensus 288 ir 289 (320)
.+
T Consensus 518 ~~ 519 (781)
T 3v9f_A 518 GI 519 (781)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.83 E-value=0.003 Score=60.40 Aligned_cols=112 Identities=16% Similarity=0.103 Sum_probs=62.0
Q ss_pred ceEEEEEc-CCCCEEEEecC-CC----eEEEEEeccc-CCcccccccccccccCeEEEEecCCCCEEEEEeCC-----Ce
Q psy14961 21 WVMACAYA-PSGSVVASGGL-DN----KVTVYAIALE-DDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGD-----CT 88 (320)
Q Consensus 21 ~V~~~~~~-~~~~~l~s~~~-dg----~i~v~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~ 88 (320)
.+.+..|| |||++|+.+.. +| .|+++|+... .. ....+. .......|+++++.|+....| ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCcccc---CceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 56788999 99998886533 22 4888887543 21 011111 113457799999877766654 35
Q ss_pred EEEEECCCcce--eeecccCccceeEEEEeeCCCCCEEEEEeCC---CeEEEEeCC
Q psy14961 89 CALWDVESSQL--LQSFHGHTGELMDLDLAPSETGNTFVSGSSD---KLVNIWDMR 139 (320)
Q Consensus 89 v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d---g~i~lwd~~ 139 (320)
|..+++.++.. ...+...... .......+++|+.|+..+.+ ..|.++|+.
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPL-FSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTT-CEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred EEEEECCCCchhcEEEEecCCCc-eEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 77788876542 1222211111 22333446778887765432 234444543
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.65 E-value=0.0049 Score=58.92 Aligned_cols=193 Identities=12% Similarity=0.024 Sum_probs=99.3
Q ss_pred CeEEEEec-CCCCEEEEEe-CC----CeEEEEECCCc-ceeee-cccCccceeEEEEeeCCCCCEEEEEeCCC-----eE
Q psy14961 67 FISCCIFP-NSDQQILTGS-GD----CTCALWDVESS-QLLQS-FHGHTGELMDLDLAPSETGNTFVSGSSDK-----LV 133 (320)
Q Consensus 67 ~v~~~~~~-~~~~~l~s~~-~d----g~v~iwd~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~~l~s~~~dg-----~i 133 (320)
.+....|+ +++++|+.+. .+ ..|+++|+.++ +.+.. +. .....+.| +++|+.|+....|. .|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~W--spDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVW--GPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEE--CSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEE--ecCCCEEEEEEECCCCCCCEE
Confidence 46678899 9998877443 23 35999999988 63321 11 11123445 55677777665442 24
Q ss_pred EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee---CCCeEEEEECCCC
Q psy14961 134 NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS---DDATCRLFDLRAD 210 (320)
Q Consensus 134 ~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s---~dg~i~iwd~~~~ 210 (320)
.++++.+++. ..+.++. . .......++.|+|+|++|+..+ ....|.++|+.++
T Consensus 250 ~~~~lgt~~~--------------~~~lv~~---------~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 250 WRHVMGKLQS--------------EDVCLYE---------E-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEETTSCGG--------------GCEEEEE---------C-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEECCCCch--------------hcEEEEe---------c-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 4444433210 0011111 1 1222346789999999887554 2346888898764
Q ss_pred e-eE--eEE-ecCcceeeeEEEEEecCCcEEEEEeC-C----CeEEEEcCCCCeEEEE-eecCCC--ceeEEEECcCCCe
Q psy14961 211 K-EV--ACY-KKDSILFGATSVDFSVSGRLLFAGYN-D----YTINVWDSLKCCRVNH-LMGHEN--RVSCLQVSPDGTA 278 (320)
Q Consensus 211 ~-~~--~~~-~~~~~~~~~~~~~~s~~~~~l~~g~~-d----g~v~~wd~~~~~~~~~-~~~h~~--~i~~i~~s~~~~~ 278 (320)
. .. ... ..... ...++.|+. |..|+..++ + ..|..+|......... +..|.. .+..+.+. .+.+
T Consensus 306 ~~~~~~~~l~~~~~~--~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~l 381 (751)
T 2xe4_A 306 NAHNTLEIVRPREKG--VRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYL 381 (751)
T ss_dssp TTCCCEEESSCCCTT--CCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEE
T ss_pred CCCceeEEeecCCCC--ceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEE
Confidence 2 11 111 11111 112233333 555544433 2 2566667653212223 444543 45566665 3456
Q ss_pred EEEecCCCceEeee
Q psy14961 279 FSSGSWDTTLRDEE 292 (320)
Q Consensus 279 l~s~s~D~~ir~~~ 292 (320)
+++...|+..+++-
T Consensus 382 v~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 382 VVAGRRAGLTRIWT 395 (751)
T ss_dssp EEEEEETTEEEEEE
T ss_pred EEEEEeCCEEEEEE
Confidence 67777788766554
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.51 E-value=0.032 Score=46.77 Aligned_cols=195 Identities=9% Similarity=0.064 Sum_probs=107.2
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC-CC-eEEEEeCCCCcEE
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-DK-LVNIWDMRTGYCV 144 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-dg-~i~lwd~~~~~~~ 144 (320)
....+.+.+++..+++-..++.|..||.+.. ....+. .......+++ .++|+++++... ++ .|..+|..+++..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~--~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAF--TSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEE--CTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEE--cCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 3456778777775555557889999998753 332222 2234455554 556775554433 22 3555665555422
Q ss_pred EEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee-EeEEec-----
Q psy14961 145 QSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKE-VACYKK----- 218 (320)
Q Consensus 145 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~-~~~~~~----- 218 (320)
.. .+.. .......++..+.+..+++-..++.|..+|...++. +.....
T Consensus 109 ~~----------------~~~~----------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 109 TL----------------LTLP----------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp EE----------------EECT----------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred EE----------------EeCC----------CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccc
Confidence 11 1110 011123444455554455555688899998775431 211110
Q ss_pred --CcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCC-CeE--EEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 219 --DSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLK-CCR--VNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 219 --~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~-~~~--~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.........+ +|++..|+.+. ..+.|..+|... +.. ...+.. ......|+++++|+++++....+.|..++
T Consensus 163 ~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 163 NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 0111122334 88887766654 577899998653 211 111111 13456799999999888877778888887
Q ss_pred cc
Q psy14961 293 SK 294 (320)
Q Consensus 293 ~~ 294 (320)
..
T Consensus 240 ~~ 241 (306)
T 2p4o_A 240 PD 241 (306)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.50 E-value=0.041 Score=48.78 Aligned_cols=198 Identities=11% Similarity=0.013 Sum_probs=108.6
Q ss_pred EEEEecCC--CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEE
Q psy14961 69 SCCIFPNS--DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQS 146 (320)
Q Consensus 69 ~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~ 146 (320)
..+.+.++ ...|+.+...+.|+.+|+.++....... .......+++ +++|+ |+.+...+. .....+..
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giav--d~dG~-lyVad~~~~------~~~~gv~~ 211 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNF--TLNGD-MVVVDDQSS------DTNTGIYL 211 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEE--CTTCC-EEEEECCSC------TTSEEEEE
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEE--CCCCC-EEEEcCCCC------cccceEEE
Confidence 45677763 4567666555889999987776544332 2333455555 55677 444443220 00000111
Q ss_pred eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcC-CCCEEEEeeCCCeEEEEECCCCeeE-eEEecCcceee
Q psy14961 147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHP-SGDAVATGSDDATCRLFDLRADKEV-ACYKKDSILFG 224 (320)
Q Consensus 147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p-~g~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~ 224 (320)
+....... . ...+.. ......++++| +|..+++-..++.|+.+|..++... ........ ..
T Consensus 212 ~~~~~~~~---~---------~~~~~~----~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~-~~ 274 (433)
T 4hw6_A 212 FTRASGFT---E---------RLSLCN----ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK-GS 274 (433)
T ss_dssp ECGGGTTC---C---------EEEEEE----CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC-SS
T ss_pred EECCCCee---c---------cccccc----cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC-CC
Confidence 11000000 0 001111 12235688999 6776666667889999998766542 22221111 11
Q ss_pred eEEEEEecCCcEEEEE-eCCCeEEEEcCC--CCeE--EEEeecC---------------CCceeEEEE---------CcC
Q psy14961 225 ATSVDFSVSGRLLFAG-YNDYTINVWDSL--KCCR--VNHLMGH---------------ENRVSCLQV---------SPD 275 (320)
Q Consensus 225 ~~~~~~s~~~~~l~~g-~~dg~v~~wd~~--~~~~--~~~~~~h---------------~~~i~~i~~---------s~~ 275 (320)
...++|+|++..|+.+ ...+.|..++.. .+.. ...+.+. -.....|++ .++
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~ 354 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE 354 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC
Confidence 2358999999966555 456789887643 2211 1112211 123677999 788
Q ss_pred CCeEEEecCCCceEeeec
Q psy14961 276 GTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 276 ~~~l~s~s~D~~ir~~~~ 293 (320)
|.++++-.....||..+.
T Consensus 355 g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 355 YDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEEETTTTEEEEECT
T ss_pred CcEEEEECCCCEEEEECC
Confidence 888888888889998875
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.46 E-value=0.04 Score=46.67 Aligned_cols=132 Identities=10% Similarity=0.045 Sum_probs=77.4
Q ss_pred eEEEEEcCCCC-EEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe--CCCeEEEEcCCCCeEE
Q psy14961 181 VNSVKFHPSGD-AVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY--NDYTINVWDSLKCCRV 257 (320)
Q Consensus 181 v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--~dg~v~~wd~~~~~~~ 257 (320)
...+++.+.+. .+++-...+.|.++++........... .......++++|.+..|+... ..+.|...++......
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~--~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 158 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC--CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence 45788887544 445556678999999875432222211 112356788998766665554 3578888876532222
Q ss_pred EEeecCCCceeEEEECcC-CCeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEE
Q psy14961 258 NHLMGHENRVSCLQVSPD-GTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTV 315 (320)
Q Consensus 258 ~~~~~h~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (320)
.-....-..-+.|+++|+ +++.++-+..+.|...+.....++.+.......| .|+++
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P-~glav 216 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP-FALTL 216 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCE-EEEEE
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCc-eEEEE
Confidence 111222345689999985 4455665667888888765444444443333333 35554
No 278
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.41 E-value=0.066 Score=48.13 Aligned_cols=254 Identities=10% Similarity=0.052 Sum_probs=129.5
Q ss_pred eEEEEEcCC-CCEEEEecC-CCeEEEEEecccCCccccccccc-ccccCeEEEEe-------cCCCCEEEEEeCCC----
Q psy14961 22 VMACAYAPS-GSVVASGGL-DNKVTVYAIALEDDSSAKKKTVA-THTSFISCCIF-------PNSDQQILTGSGDC---- 87 (320)
Q Consensus 22 V~~~~~~~~-~~~l~s~~~-dg~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-------~~~~~~l~s~~~dg---- 87 (320)
-..++|+|. +..|+.+.. .+.|++.|+. ........... ........++| .+++..|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~--~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLK--NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETT--TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECC--CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 457889983 444554443 3556666653 21111111111 11223677888 88888777776554
Q ss_pred ---eEEEEECCC-ccee-----eecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCC-------CCcEEEEeccCC
Q psy14961 88 ---TCALWDVES-SQLL-----QSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMR-------TGYCVQSFEGHH 151 (320)
Q Consensus 88 ---~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~-------~~~~~~~~~~~~ 151 (320)
.|.+.+... +... ..+... .....+++.+. ++.++++-..++.|..+|+. ++..-...
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~-~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~---- 292 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPI-NGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI---- 292 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTT-TCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB----
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCC-CCeEEEEECCCCEEEEEecccccccccCceeeccc----
Confidence 255555333 1221 111111 12234445432 34555566667778777765 33210000
Q ss_pred ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCC--CeeE--eEEecC-------
Q psy14961 152 NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRA--DKEV--ACYKKD------- 219 (320)
Q Consensus 152 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~--~~~~--~~~~~~------- 219 (320)
.....+.. +.+... +....-..++|+|+|++| ++-+....|+.++... +... ..+-..
T Consensus 293 -~~~~~g~~--------~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~ 362 (496)
T 3kya_A 293 -VKNNPNTF--------KQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYR 362 (496)
T ss_dssp -GGGCTTTE--------EEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCB
T ss_pred -cccccccc--------ceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCccc
Confidence 00000000 001111 112334789999999954 5556778898866543 2210 111110
Q ss_pred ------cceeeeE-EEEEe-------cCCcEEEEEeCCCeEEEEcCCCCeEEEEeecC----------------------
Q psy14961 220 ------SILFGAT-SVDFS-------VSGRLLFAGYNDYTINVWDSLKCCRVNHLMGH---------------------- 263 (320)
Q Consensus 220 ------~~~~~~~-~~~~s-------~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h---------------------- 263 (320)
.....+. -+... ++|.+.++=+.+..|+.++. .+ .+.++.+.
T Consensus 363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~ 440 (496)
T 3kya_A 363 DDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLREV 440 (496)
T ss_dssp CCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTTT
T ss_pred CCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchhh
Confidence 0011123 33443 45666666667889999984 34 34344322
Q ss_pred --CCceeEEEECcC-CCeEEEecCCCceEeeecch
Q psy14961 264 --ENRVSCLQVSPD-GTAFSSGSWDTTLRDEESKN 295 (320)
Q Consensus 264 --~~~i~~i~~s~~-~~~l~s~s~D~~ir~~~~~~ 295 (320)
-.....|+++++ |.++++=+.+..||..+.+.
T Consensus 441 a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 441 ARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp CCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred hhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 123678999996 88888888889999888543
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.37 E-value=0.0043 Score=58.76 Aligned_cols=224 Identities=9% Similarity=-0.017 Sum_probs=108.1
Q ss_pred ceEEEEEcCCCCEEEEec-CCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCcc
Q psy14961 21 WVMACAYAPSGSVVASGG-LDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESSQ 98 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~-~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~ 98 (320)
.+.+++|++.+..|+.+. ..+.|..++++...........+.........+++...++.|+.+ ...+.|.+.+++...
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 456788998776666553 457888887753100001111111111122345555444444443 456789999887554
Q ss_pred eeeecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecC
Q psy14961 99 LLQSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEG 176 (320)
Q Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 176 (320)
....+.........+++.| .+..|+.+.. .+.|.+.++..... +.+ +..
T Consensus 487 ~~~l~~~~~~~P~giavDp--~~g~ly~td~~~~~~I~~~~~dG~~~-------------------------~~l--~~~ 537 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNGVDI-------------------------YSL--VTE 537 (699)
T ss_dssp EEEECCCSSCCCCCEECCS--SSSCCEECCCSSSCCEEBCCSSSCCC-------------------------CEE--SCS
T ss_pred eEEEEeCCCCCcceEEEcc--CCCcEEEcccCCCCeEEEEeCCCCCe-------------------------eEE--EeC
Confidence 3322221122234455433 2333333322 13444443321100 000 000
Q ss_pred CCCCeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCe
Q psy14961 177 HQSDVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCC 255 (320)
Q Consensus 177 ~~~~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~ 255 (320)
.-...+.|+++|++..| ++-+..+.|..+++....................+++..+ .++++....+.|..++..++.
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 11234579999875544 5556678899999875332222221111111233444443 455555677899999987777
Q ss_pred EEEEeecCCCceeEEEECc
Q psy14961 256 RVNHLMGHENRVSCLQVSP 274 (320)
Q Consensus 256 ~~~~~~~h~~~i~~i~~s~ 274 (320)
.+..+.........|++.+
T Consensus 617 ~~~~i~~~~~~P~~i~v~~ 635 (699)
T 1n7d_A 617 DVNLLAENLLSPEDMVLFH 635 (699)
T ss_dssp EEECCCTTCSSCCCCCBCS
T ss_pred ceEEeecCCCCCcEEEEeC
Confidence 6665543333344554443
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.34 E-value=0.059 Score=46.01 Aligned_cols=192 Identities=14% Similarity=0.268 Sum_probs=112.4
Q ss_pred CCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCC--CCC---EEEEEeC---CCeEEEEeC--CCCcEEEE
Q psy14961 77 DQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSE--TGN---TFVSGSS---DKLVNIWDM--RTGYCVQS 146 (320)
Q Consensus 77 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~---~l~s~~~---dg~i~lwd~--~~~~~~~~ 146 (320)
...++.....+-+.+||+ .++.++.+.. +.+..+.+-+.- .|+ .+++... +..|.+|++ .++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 346777778889999999 6888777653 556666665410 121 2233333 467888865 2222 221
Q ss_pred eccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEE--cCC-CC-EEEEeeCCCeEEEEECC---C----CeeEeE
Q psy14961 147 FEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKF--HPS-GD-AVATGSDDATCRLFDLR---A----DKEVAC 215 (320)
Q Consensus 147 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~--~p~-g~-~l~s~s~dg~i~iwd~~---~----~~~~~~ 215 (320)
+.... .++. .-...+..+++ +|. +. +++...++|.+..|++. . .+.+..
T Consensus 116 i~~~~-----------------~pv~---t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 116 MTDPD-----------------HPIA---TAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CSCTT-----------------SCEE---CCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred ccccc-----------------cCcC---CCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 10000 0000 00123445666 674 44 57778889999999883 2 233444
Q ss_pred EecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC-----CCeEEEEee-cC-CCceeEEEE--CcCCC--eEEEecC
Q psy14961 216 YKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL-----KCCRVNHLM-GH-ENRVSCLQV--SPDGT--AFSSGSW 284 (320)
Q Consensus 216 ~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~-----~~~~~~~~~-~h-~~~i~~i~~--s~~~~--~l~s~s~ 284 (320)
+.... .+..+...+....|+.+-++.-|..++.. +...+.... +| ...+..|++ .++++ +|+|+-.
T Consensus 176 f~lgs---q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 176 FKMNS---QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp EECSS---CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred ecCCC---CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 44332 34677888888999999998666666644 234444331 33 346888988 56666 4555546
Q ss_pred CCceEeeecch
Q psy14961 285 DTTLRDEESKN 295 (320)
Q Consensus 285 D~~ir~~~~~~ 295 (320)
+.+.-+++.+.
T Consensus 253 ~~s~~Vydr~~ 263 (355)
T 3amr_A 253 NSSYAIYDRQG 263 (355)
T ss_dssp GTEEEEEESST
T ss_pred CCEEEEEECCC
Confidence 78899999853
No 281
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.34 E-value=0.058 Score=45.80 Aligned_cols=111 Identities=7% Similarity=-0.056 Sum_probs=63.1
Q ss_pred CCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC--cceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC-
Q psy14961 178 QSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD--SILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC- 254 (320)
Q Consensus 178 ~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~- 254 (320)
...+..+++.|++..+ .++.+|.+.+.+.+.++.-...... ........+.+.+++.++++|. +|.+. +....+
T Consensus 204 ~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~DgG~ 280 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDGGQ 280 (327)
T ss_dssp SSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESSTTS
T ss_pred CCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCCCc
Confidence 3467788899988755 4556788877643323322211111 0112346777888888777665 56553 322222
Q ss_pred --eEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 255 --CRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 255 --~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
..+.....+...+.++.|.++++ ++.++.+|+|..++
T Consensus 281 tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 281 TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 22221112345678999986655 56667788877655
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.31 E-value=0.071 Score=46.42 Aligned_cols=217 Identities=9% Similarity=0.021 Sum_probs=110.5
Q ss_pred cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCc
Q psy14961 20 TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESS 97 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~ 97 (320)
....+++|++.+..|. +-...+.|..++++... ... .+.........+++.+.+..|+.+ ...+.|.+.+++..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--~~~--~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--VEE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--EEE--EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--cEE--EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 4567899997655554 44456778877764221 111 111111122345555545555444 45678888887654
Q ss_pred ceeeecccCccceeEEEEeeCCCCCEEEEEeC-C-CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSS-D-KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~-d-g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
.....+.........+++.|. +..|+.+.. + +.|...++...... ....
T Consensus 192 ~~~~l~~~~l~~P~giavdp~--~g~ly~td~~~~~~I~r~~~dG~~~~---------------------------~~~~ 242 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPM--EGTIYWTDWGNTPRIEASSMDGSGRR---------------------------IIAD 242 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETT--TTEEEEEECSSSCEEEEEETTSCSCE---------------------------EEEC
T ss_pred ceEEeecCCCCCCcEEEEEcC--CCeEEEeccCCCCEEEEEeCCCCCcE---------------------------EEEE
Confidence 322222222233455665443 344444332 2 45555554321100 0001
Q ss_pred CCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 176 GHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 176 ~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
..-...+.|+++|++..|+ +-+..+.|..+|+............ ...+..+++ ..+.++++-...+.|..++..++
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS--CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC--CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 1122357899998766654 4456788999998754332222211 112345566 35566666667888988886555
Q ss_pred eEEEEeecCCCceeEEEE
Q psy14961 255 CRVNHLMGHENRVSCLQV 272 (320)
Q Consensus 255 ~~~~~~~~h~~~i~~i~~ 272 (320)
.....+.........|++
T Consensus 320 ~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 320 KNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp CSCEEEECSCSCCCCEEE
T ss_pred cceEEEccCCCCCceEEE
Confidence 554444433333344443
No 283
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.26 E-value=0.069 Score=45.07 Aligned_cols=212 Identities=10% Similarity=0.002 Sum_probs=108.7
Q ss_pred cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCc
Q psy14961 20 TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESS 97 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~ 97 (320)
....+++|++++..|. +-...+.|..++++...........+.........+++...++.|+.+ ...+.|.+.+++..
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 4467899998665454 445568888888753100001111111111233566666545555544 55789999998754
Q ss_pred ceeeecccCccceeEEEEeeCCCCCEEEEEeCC--CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGSSD--KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~d--g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
.....+.........+++.| .+..++.+... +.|...++.... ...+ ..
T Consensus 110 ~~~~~~~~~~~~P~~iavdp--~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~--------------------------~~ 160 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDP--VHGFMYWTDWGTPAKIKKGGLNGVD-IYSL--------------------------VT 160 (316)
T ss_dssp SEEEEEECTTCCEEEEEEET--TTTEEEEEECSSSCEEEEEETTSCC-EEEE--------------------------EC
T ss_pred ceEEEEECCCCCcceEEeCC--CCCEEEEEccCCCCeEEEEcCCCCC-eEEE--------------------------EE
Confidence 33222221223345566543 23444444332 455555543211 0000 00
Q ss_pred CCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 176 GHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 176 ~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
..-...+.++++|++..|+ +-+..+.|..+|++................+..+++. .+.++++-...+.|..++..++
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 1122467899999877665 4456779999998753322222211111123455564 4556666667888999887655
Q ss_pred eEEEEee
Q psy14961 255 CRVNHLM 261 (320)
Q Consensus 255 ~~~~~~~ 261 (320)
..+..+.
T Consensus 240 ~~~~~i~ 246 (316)
T 1ijq_A 240 SDVNLLA 246 (316)
T ss_dssp CCCEEEE
T ss_pred cceEEEe
Confidence 5444443
No 284
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.23 E-value=0.081 Score=45.43 Aligned_cols=58 Identities=24% Similarity=0.304 Sum_probs=36.5
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEcCCCCe------EEEEeecCCCceeEEEECcCCCeEEEec
Q psy14961 225 ATSVDFSVSGRLLFAGYNDYTINVWDSLKCC------RVNHLMGHENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 225 ~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~------~~~~~~~h~~~i~~i~~s~~~~~l~s~s 283 (320)
...++| .+|.++++....+.|...+..... ....+..-...+..+++.|||.++++..
T Consensus 270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 345666 577777666667777776543221 1222322235789999999998877764
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.23 E-value=0.074 Score=44.88 Aligned_cols=224 Identities=9% Similarity=-0.025 Sum_probs=118.1
Q ss_pred EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCC----cceeeecccCc
Q psy14961 33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVES----SQLLQSFHGHT 107 (320)
Q Consensus 33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~----~~~~~~~~~~~ 107 (320)
+|+.+.. ..|+..+++..... .+.........+.|.+.++.|+.+. .++.|..+++++ ......+....
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~-----~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYT-----SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCE-----EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred EEEEECC-CeEEEEECCCcceE-----ehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 3444433 45777777532211 1111223456788877666666554 468999999875 22111122111
Q ss_pred cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc
Q psy14961 108 GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH 187 (320)
Q Consensus 108 ~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 187 (320)
.....+++.+. .++..++-..++.|.+.|+....... .+.........++++
T Consensus 77 ~~p~glavd~~-~~~ly~~d~~~~~I~~~~~~g~~~~~---------------------------~~~~~~~~P~~iavd 128 (316)
T 1ijq_A 77 QAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVKRKT---------------------------LFRENGSKPRAIVVD 128 (316)
T ss_dssp SCCCEEEEETT-TTEEEEEETTTTEEEEEETTSSSEEE---------------------------EEECTTCCEEEEEEE
T ss_pred CCcCEEEEeec-CCeEEEEECCCCEEEEEeCCCCceEE---------------------------EEECCCCCcceEEeC
Confidence 23345555322 22333343455666666654321110 011112245789999
Q ss_pred CCCCEEEEeeC-C-CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEee--c
Q psy14961 188 PSGDAVATGSD-D-ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLM--G 262 (320)
Q Consensus 188 p~g~~l~s~s~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~--~ 262 (320)
|.+..|+.+.. . +.|...+++.... ..+... .......++++|++..|+.+. ..+.|..+|.....+..-.. +
T Consensus 129 p~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~ 206 (316)
T 1ijq_A 129 PVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK 206 (316)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSCCE-EEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred CCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC
Confidence 97665544433 3 6888888764332 222111 122357899999877776665 56789999875422211111 1
Q ss_pred CCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 263 HENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 263 h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.......|++. .+.++++....+.|...+.
T Consensus 207 ~~~~P~giav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 207 RLAHPFSLAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp TTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred ccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence 22345678885 4667777777788887774
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.22 E-value=0.096 Score=45.87 Aligned_cols=223 Identities=9% Similarity=-0.044 Sum_probs=114.5
Q ss_pred ccceEEEEEcCCCCEEEEe-cCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCC
Q psy14961 19 ATWVMACAYAPSGSVVASG-GLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVES 96 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l~s~-~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~ 96 (320)
...+.+++|++.+..|.-+ ...+.|..++++.....................+++...++.|+.+ ...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 3467889999866555544 4567788777643110001111111122334556666544455544 4567899988875
Q ss_pred cceeeecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961 97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF 174 (320)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 174 (320)
......+.........+++.|. +..|+.... .+.|...++...... ..+
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~--~g~ly~td~~~~~~I~~~~~dG~~~~---------------------------~~~ 241 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPV--HGFMYWTDWGTPAKIKKGGLNGVDIY---------------------------SLV 241 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETT--TTEEEEEECSSSCCEEEEETTSCSCE---------------------------EEE
T ss_pred CceEEEEeCCCCCcceEEEecc--cCeEEEEeCCCCCEEEEEeCCCCccE---------------------------EEE
Confidence 5433222222233455666543 344544432 245555554321110 001
Q ss_pred cCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961 175 EGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK 253 (320)
Q Consensus 175 ~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~ 253 (320)
...-...+.|+++|++..|+.+ +..+.|..+|++...................+++ ..+.++.+-...+.|..+|..+
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCC
Confidence 1112346789999887776554 5677899999875433322222111112234555 2445556666778888888666
Q ss_pred CeEEEEeecCCCceeEEE
Q psy14961 254 CCRVNHLMGHENRVSCLQ 271 (320)
Q Consensus 254 ~~~~~~~~~h~~~i~~i~ 271 (320)
+..+..+.........|+
T Consensus 321 G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 321 GSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp CCCCEEEECSCSCEEEEE
T ss_pred CCceEEEecCCCCCceEE
Confidence 655555544333344443
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.19 E-value=0.012 Score=52.31 Aligned_cols=132 Identities=12% Similarity=0.166 Sum_probs=76.3
Q ss_pred eEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeC-CC----eEEEEECCCCee-EeEEecCcceeeeEEEEEec
Q psy14961 159 LVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSD-DA----TCRLFDLRADKE-VACYKKDSILFGATSVDFSV 232 (320)
Q Consensus 159 ~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~-dg----~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~s~ 232 (320)
.|..+|+..+....... .......++++++|+.|+.+.. ++ .+...+...... ...... ...+..++++|
T Consensus 160 ~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~---~~~p~giavdp 235 (430)
T 3tc9_A 160 PTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTK---GQNCNGAETHP 235 (430)
T ss_dssp EEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEE---CSSCCCEEECT
T ss_pred cEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeecc---CCCceEEEEeC
Confidence 44445554433222222 3345788999999996655543 22 233344322111 011111 11245678999
Q ss_pred -CCcEEEEEeCCCeEEEEcCCCCeEEEEe-ecCCCceeEEEECcCCC-eEEEecCCCceEeeecc
Q psy14961 233 -SGRLLFAGYNDYTINVWDSLKCCRVNHL-MGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEESK 294 (320)
Q Consensus 233 -~~~~l~~g~~dg~v~~wd~~~~~~~~~~-~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~~ 294 (320)
+|.++++-..++.|..++.......... .+.......|+|+|+|+ ++++-.....|+.++..
T Consensus 236 ~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 236 INGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 6776666667889999998765432111 12224568999999999 56666678888887753
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.11 E-value=0.033 Score=47.11 Aligned_cols=116 Identities=12% Similarity=0.029 Sum_probs=78.8
Q ss_pred eEEEEE---cCCCCEEEEee-------------CCCeEEEEECC---CCeeEeEEecCc-----------ceeeeEEEEE
Q psy14961 181 VNSVKF---HPSGDAVATGS-------------DDATCRLFDLR---ADKEVACYKKDS-----------ILFGATSVDF 230 (320)
Q Consensus 181 v~~v~~---~p~g~~l~s~s-------------~dg~i~iwd~~---~~~~~~~~~~~~-----------~~~~~~~~~~ 230 (320)
+..|.+ .|++..+++.. .+..+..+|+. +++.+....... ....+..+++
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 467888 68876666433 26789999998 676654333211 1234678999
Q ss_pred ecCCcEEEEEeCC-CeEEEEcCCCCeEEEEeec-----CCCceeEEEECcCCCeEEEecCCCceEeeecchH
Q psy14961 231 SVSGRLLFAGYND-YTINVWDSLKCCRVNHLMG-----HENRVSCLQVSPDGTAFSSGSWDTTLRDEESKNR 296 (320)
Q Consensus 231 s~~~~~l~~g~~d-g~v~~wd~~~~~~~~~~~~-----h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~~~~ 296 (320)
.++|+..++++.. +.|...+............ ..-..+.|+++|||+.|+....++.+...+...+
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 9999999988877 8887777554322211111 1224679999999998888877999988887643
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.02 E-value=0.25 Score=47.27 Aligned_cols=209 Identities=9% Similarity=-0.040 Sum_probs=104.7
Q ss_pred ccceEEEEEcCCCCEE-EEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCC
Q psy14961 19 ATWVMACAYAPSGSVV-ASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVES 96 (320)
Q Consensus 19 ~~~V~~~~~~~~~~~l-~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~ 96 (320)
...+.+++|++.+..| .+-...+.|+.++++...........+.........+++...++.|+.+ ...+.|.+.+++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3456789999855544 4445567788777653211001111111122334456666556555544 4568999999875
Q ss_pred cceeeecccCccceeEEEEeeCCCCCEEEEEeC--CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961 97 SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS--DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF 174 (320)
Q Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 174 (320)
......+.........|++.+. ...|+.+.. .+.|.+.++....... .+
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~--~g~LYwtD~g~~~~I~~~~~dG~~~~~---------------------------lv 553 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPV--HGFMYWTDWGTPAKIKKGGLNGVDIYS---------------------------LV 553 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETT--TTEEEEEECSSSCEEEEEETTSCCEEE---------------------------EE
T ss_pred CeEEEEEeCCCCCcceEEEecC--CCCEEEecCCCCCeEEEEecCCCceEE---------------------------EE
Confidence 4432222222233456666543 334544432 2456655554321110 01
Q ss_pred cCCCCCeEEEEEcCCCCEEEEe-eCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCC
Q psy14961 175 EGHQSDVNSVKFHPSGDAVATG-SDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLK 253 (320)
Q Consensus 175 ~~~~~~v~~v~~~p~g~~l~s~-s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~ 253 (320)
...-...+.|++++.+..|+.+ ...+.|...++....................+++. .+.+.++-...+.|...|..+
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCC
Confidence 1112346789999876666544 45678999998754433333221111122344443 233444445667788777655
Q ss_pred CeEE
Q psy14961 254 CCRV 257 (320)
Q Consensus 254 ~~~~ 257 (320)
+..+
T Consensus 633 G~~~ 636 (791)
T 3m0c_C 633 GSDV 636 (791)
T ss_dssp CCCC
T ss_pred Ccce
Confidence 5433
No 290
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.91 E-value=0.17 Score=43.38 Aligned_cols=206 Identities=10% Similarity=0.035 Sum_probs=107.1
Q ss_pred cceEEEEEcCCCCEEE-EecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEE-eCCCeEEEEECCCc
Q psy14961 20 TWVMACAYAPSGSVVA-SGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTG-SGDCTCALWDVESS 97 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~-s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~ 97 (320)
....+++|++.+..|. +-...+.|..++++..... . ...........+++...++.|+.+ ...+.|.+.+++..
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~--~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE--E--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--E--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCce--E--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 3467889997655554 4445677887776432111 1 111111223456666545555544 45678999988754
Q ss_pred ceeeecccCccceeEEEEeeCCCCCEEEEEe-CC-CeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 98 QLLQSFHGHTGELMDLDLAPSETGNTFVSGS-SD-KLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 98 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~-~d-g~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
.....+.........+++.|. +..++.+. .+ +.|...++...... ..+.
T Consensus 149 ~~~~l~~~~l~~P~~iavdp~--~g~ly~td~~~~~~I~r~~~dG~~~~---------------------------~~~~ 199 (349)
T 3v64_C 149 HRKVLLWQSLEKPRAIALHPM--EGTIYWTDWGNTPRIEASSMDGSGRR---------------------------IIAD 199 (349)
T ss_dssp SCEEEECTTCSCEEEEEEETT--TTEEEEEECSSSCEEEEEETTSCSCE---------------------------ESCC
T ss_pred ceEEEEeCCCCCcceEEEecC--cCeEEEeccCCCCEEEEEeCCCCCcE---------------------------EEEE
Confidence 322222222233455666543 33444333 33 45555554321100 0001
Q ss_pred CCCCCeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 176 GHQSDVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 176 ~~~~~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
..-...+.++++|++..|+ +-+..+.|..+|++........... ...+..+++ ..+.+.++-...+.|..++..++
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~--~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC--CCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence 1122457899998766664 4456788999998754322222211 112345556 35566666667788888875555
Q ss_pred eEEEEee
Q psy14961 255 CRVNHLM 261 (320)
Q Consensus 255 ~~~~~~~ 261 (320)
.....+.
T Consensus 277 ~~~~~i~ 283 (349)
T 3v64_C 277 KNQEIIR 283 (349)
T ss_dssp CSCEEEE
T ss_pred CccEEec
Confidence 4444443
No 291
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.90 E-value=0.049 Score=44.46 Aligned_cols=118 Identities=9% Similarity=0.093 Sum_probs=77.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEE-eeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCC
Q psy14961 174 FEGHQSDVNSVKFHPSGDAVAT-GSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSL 252 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l~s-~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~ 252 (320)
+.+-...+..++++|+++.|++ ...++.|...|.. ++.+..++... ......+++.+++.++++.-.++.+.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4455567999999998776654 6678889999987 66655554321 1234667788888877765567788888754
Q ss_pred CCe---EEEEee------cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 253 KCC---RVNHLM------GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 253 ~~~---~~~~~~------~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
... .+.... ........|+|+|+++.|.++..-...++|+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 322 112221 22446799999998877666665444455554
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.84 E-value=0.11 Score=46.76 Aligned_cols=111 Identities=12% Similarity=0.130 Sum_probs=67.6
Q ss_pred CeEEEEE-------cCCCCEEEEeeCCC-------eEEEEECCC-CeeE-----eEEecCcceeeeEEEEEecC-CcEEE
Q psy14961 180 DVNSVKF-------HPSGDAVATGSDDA-------TCRLFDLRA-DKEV-----ACYKKDSILFGATSVDFSVS-GRLLF 238 (320)
Q Consensus 180 ~v~~v~~-------~p~g~~l~s~s~dg-------~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~s~~-~~~l~ 238 (320)
....++| +++|++|+.+...+ .+.+.+... +... ..+.. ...+..++++|+ +.+++
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---~~~p~giavdp~~g~LYv 263 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA---YKQCNGATIHPINGELYF 263 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---ESCCCCEEECTTTCCEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc---CCCceEEEEcCCCCeEEE
Confidence 4788999 99999776665543 256665333 1111 11111 112356788995 45555
Q ss_pred EEeCCCeEEEEcCC-------CCeE-----------EEEe--ecCCCceeEEEECcCCC-eEEEecCCCceEeeec
Q psy14961 239 AGYNDYTINVWDSL-------KCCR-----------VNHL--MGHENRVSCLQVSPDGT-AFSSGSWDTTLRDEES 293 (320)
Q Consensus 239 ~g~~dg~v~~wd~~-------~~~~-----------~~~~--~~h~~~i~~i~~s~~~~-~l~s~s~D~~ir~~~~ 293 (320)
+-..++.|..+|.. ++.. ...+ .+....-..|+|+|+|+ ++++-+....|+..+.
T Consensus 264 td~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 264 NSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 66688899999975 3322 1122 12234568999999999 4666667788888653
No 293
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.80 E-value=0.2 Score=43.82 Aligned_cols=109 Identities=19% Similarity=0.149 Sum_probs=73.1
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCee------------EeEEecCcc----eeeeEEEEEecC---CcEEEEE
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKE------------VACYKKDSI----LFGATSVDFSVS---GRLLFAG 240 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~------------~~~~~~~~~----~~~~~~~~~s~~---~~~l~~g 240 (320)
.|..+..+|+|++||..+ +..|.|..++.+.. ...+.-... ...+.++.|+|- +..|++=
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 567799999999998876 45899998873321 112222111 124678999985 5589999
Q ss_pred eCCCeEEEEcCCCC--eEE--------EEeecCCCceeEEEECcCCCeEEE--ecCCCceE
Q psy14961 241 YNDYTINVWDSLKC--CRV--------NHLMGHENRVSCLQVSPDGTAFSS--GSWDTTLR 289 (320)
Q Consensus 241 ~~dg~v~~wd~~~~--~~~--------~~~~~h~~~i~~i~~s~~~~~l~s--~s~D~~ir 289 (320)
..|++|++||+... .+. ..+......|.+++|.+++-.|.. .+..|-|.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 99999999997652 122 111233467899999998766666 44667665
No 294
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.66 E-value=0.64 Score=46.57 Aligned_cols=111 Identities=10% Similarity=0.021 Sum_probs=61.5
Q ss_pred ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCC------CCEEEEEeC-CCeEEEEE
Q psy14961 21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNS------DQQILTGSG-DCTCALWD 93 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~~~-dg~v~iwd 93 (320)
.|.+++... .+++.+. ++.+.++.++.. ....... ..-...|.|+.+.+. ..+++.|.. |++++|++
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~--~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQ--ELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETT--EEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCC--ceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 344444332 3455554 577777776521 1111111 112457899988643 368889986 99999999
Q ss_pred CCCcceeeecccC-ccceeEEEEeeCCCCCEEEEEeCCCeEEEEe
Q psy14961 94 VESSQLLQSFHGH-TGELMDLDLAPSETGNTFVSGSSDKLVNIWD 137 (320)
Q Consensus 94 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd 137 (320)
+.+.+.+....-. .....++.+.......+|..|-.||.+..+.
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFG 633 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEE
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEE
Confidence 9876554322211 1233344443222235778888888875444
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.60 E-value=0.46 Score=44.22 Aligned_cols=248 Identities=7% Similarity=-0.013 Sum_probs=134.6
Q ss_pred EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceeeecccCcccee
Q psy14961 33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQSFHGHTGELM 111 (320)
Q Consensus 33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~ 111 (320)
+|+.+ ....|+..+++..... ....+. .......+.|.+.++.|+.+. .++.|..++++.......+........
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~--~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~ 83 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNN--VAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE 83 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCE--EECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred EEEEE-eCCcEEEEECCCCCcc--eEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence 34443 4467888887532211 111111 123466788887766766554 578898888875443322222122344
Q ss_pred EEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCC
Q psy14961 112 DLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGD 191 (320)
Q Consensus 112 ~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~ 191 (320)
.+++.+. .++...+-...+.|.+.++........ +...-.....|+++|...
T Consensus 84 GlAvD~~-~~~LY~tD~~~~~I~v~~~dG~~~~~l---------------------------~~~~l~~P~~iavdp~~G 135 (628)
T 4a0p_A 84 GMAVDWL-GKNLYWADTGTNRIEVSKLDGQHRQVL---------------------------VWKDLDSPRALALDPAEG 135 (628)
T ss_dssp EEEEETT-TTEEEEEETTTTEEEEEETTSTTCEEE---------------------------ECSSCCCEEEEEEETTTT
T ss_pred eEEEEeC-CCEEEEEECCCCEEEEEecCCCcEEEE---------------------------EeCCCCCcccEEEccCCC
Confidence 5655432 233333444455666666543211000 001122357899999655
Q ss_pred EEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCcee
Q psy14961 192 AVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVS 268 (320)
Q Consensus 192 ~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~ 268 (320)
.|+-.. ..+.|...+++......... ....+..+++++++..|+.+. ..+.|...|.....+ ..+...-....
T Consensus 136 ~lY~tD~g~~~~I~r~~~dG~~~~~l~~---~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~ 211 (628)
T 4a0p_A 136 FMYWTEWGGKPKIDRAAMDGSERTTLVP---NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 211 (628)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEE
T ss_pred eEEEeCCCCCCEEEEEeCCCCceEEEEC---CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCce
Confidence 554443 35678888877544332222 122357889999877777665 567888888754333 22333333445
Q ss_pred EEEECcCCCeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEEEee
Q psy14961 269 CLQVSPDGTAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTVYFQ 318 (320)
Q Consensus 269 ~i~~s~~~~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (320)
+|++.. +.++++-...+.|..-+...--....+..+...| .||+|+-.
T Consensus 212 glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p-~~i~v~~~ 259 (628)
T 4a0p_A 212 GLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYV-MDILVFHS 259 (628)
T ss_dssp EEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSC-CEEEEECG
T ss_pred EEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCc-ceeeeeee
Confidence 788765 5666776667888877743221223344344444 47777653
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.60 E-value=0.27 Score=41.48 Aligned_cols=220 Identities=7% Similarity=-0.022 Sum_probs=115.7
Q ss_pred CCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcceee-ecccCccceeEEEEee
Q psy14961 40 DNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQLLQ-SFHGHTGELMDLDLAP 117 (320)
Q Consensus 40 dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~ 117 (320)
...|+..+++...... ............+.|.+.++.|+-+. ..+.|..++++...... .+.........+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~---~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENA---TIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCC---EEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEE---EEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 3567887775322111 01111122345677876555665544 56788888887653211 1111112233455433
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee
Q psy14961 118 SETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS 197 (320)
Q Consensus 118 ~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s 197 (320)
. .++.+.+-...+.|.++++...... ..+.........++++|.+..|+.+.
T Consensus 89 ~-~g~ly~~d~~~~~I~~~~~dG~~~~---------------------------~l~~~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 89 L-GEKLYWTDSETNRIEVSNLDGSLRK---------------------------VLFWQELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp T-TTEEEEEETTTTEEEEEETTSCSCE---------------------------EEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred C-CCeEEEEECCCCEEEEEECCCCcEE---------------------------EEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 2 2333334444556666665432110 00111223457899998766555444
Q ss_pred --CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECc
Q psy14961 198 --DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP 274 (320)
Q Consensus 198 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~ 274 (320)
..+.|...+++.......... .......++++|++..|+.+. ..+.|..+|.....+..-..+.......|++..
T Consensus 141 ~~~~~~I~r~~~dG~~~~~~~~~--~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~ 218 (318)
T 3sov_A 141 WGEVPKIERAGMDGSSRFIIINS--EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE 218 (318)
T ss_dssp CSSSCEEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET
T ss_pred cCCCCEEEEEEcCCCCeEEEEEC--CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC
Confidence 357888888764332221111 122357899999777666664 567899998754322221222334556777753
Q ss_pred CCCeEEEecCCCceEeeec
Q psy14961 275 DGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 275 ~~~~l~s~s~D~~ir~~~~ 293 (320)
+.++.+-...+.|...+.
T Consensus 219 -~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 219 -DILYWTDWSTHSILACNK 236 (318)
T ss_dssp -TEEEEEETTTTEEEEEET
T ss_pred -CEEEEEecCCCeEEEEEC
Confidence 456667667777877775
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.59 E-value=0.25 Score=40.95 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=48.6
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeEEE
Q psy14961 189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCRVN 258 (320)
Q Consensus 189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~~~ 258 (320)
+++.++.|+.+ ..+..+|+.+.+=...-......... ++ ...++.+++.|+.+ ..+.+||..+..-..
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGA-GV-ALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-EE-EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccc-eE-EEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 45666776654 45888898765422211111111111 22 22367777887753 468889987654322
Q ss_pred EeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961 259 HLMGHENRVSCLQVSPDGTAFSSGSWDT 286 (320)
Q Consensus 259 ~~~~h~~~i~~i~~s~~~~~l~s~s~D~ 286 (320)
.-.-.......-++..++++++.|+.++
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 237 VTSMTTPRCYVGATVLRGRLYAIAGYDG 264 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CCCCCCcccceeEEEECCEEEEEcCcCC
Confidence 1110111111112223778888888764
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.56 E-value=0.26 Score=40.96 Aligned_cols=94 Identities=11% Similarity=0.126 Sum_probs=46.8
Q ss_pred CCCEEEEeeC---------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961 189 SGDAVATGSD---------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC 254 (320)
Q Consensus 189 ~g~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~ 254 (320)
+++.++.|+. -..+.+||+.+.+=...-........ .++. ..++++++.|+.+ ..+.+||..+.
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN-HGLV-FVKDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc-ceEE-EECCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 4555566653 34588899877642211111111111 1222 2267777777643 45788887664
Q ss_pred eEE--EEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961 255 CRV--NHLMGHENRVSCLQVSPDGTAFSSGSWDT 286 (320)
Q Consensus 255 ~~~--~~~~~h~~~i~~i~~s~~~~~l~s~s~D~ 286 (320)
.-. ..+........++.+ ++++++.||.++
T Consensus 227 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 258 (306)
T 3ii7_A 227 EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQG 258 (306)
T ss_dssp EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCS
T ss_pred cEEECCCCCCCccceeEEEE--CCEEEEEeCcCC
Confidence 322 111111111222333 778899998653
No 299
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.54 E-value=0.27 Score=40.77 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=34.3
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961 189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC 254 (320)
Q Consensus 189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~ 254 (320)
++..++.|+.+ ..+.+||+.+.+=...-...........+ ..++++++.|+.+ ..+..||..+.
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT--VLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--EECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 45666777654 46889998876422211111111111222 2367777777654 35677886654
No 300
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.36 E-value=0.47 Score=41.57 Aligned_cols=160 Identities=18% Similarity=0.246 Sum_probs=92.8
Q ss_pred CCCCEEEEEeCCCeEEEEECCCcceeeecccC----ccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccC
Q psy14961 75 NSDQQILTGSGDCTCALWDVESSQLLQSFHGH----TGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGH 150 (320)
Q Consensus 75 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~ 150 (320)
.++..++.+- ++.||.-++.....-+.++.. -..+..+.+ +++|++|+..+. ..|.+-.+..+.....
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvl--SpsG~lLAl~g~-~~V~Vv~LP~~~~~~~---- 101 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVIS--STSGDLLCLFND-NEIFVMEVPWGYSNVE---- 101 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEE--CTTSSEEEEECS-SEEEEEECCTTCSCCC----
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEE--CCCCCEEEEecC-CeEEEEEecCccccCc----
Confidence 4555565554 467887776643322222221 225655554 667888887754 4788887764321100
Q ss_pred CccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC---CCEEEEeeCCCeEEEEECCCC--eeEeEEecC------
Q psy14961 151 HNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS---GDAVATGSDDATCRLFDLRAD--KEVACYKKD------ 219 (320)
Q Consensus 151 ~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~---g~~l~s~s~dg~i~iwd~~~~--~~~~~~~~~------ 219 (320)
.......-.++.|.+...+ .....+|..+.|||- +..|++-..|+.|++||+... ++. .+.+.
T Consensus 102 ~~~~~~~~q~~ty~l~~~~-----~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~ 175 (452)
T 3pbp_A 102 DVSIQDAFQIFHYSIDEEE-----VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGL 175 (452)
T ss_dssp CHHHHHTTEEEEEEGGGCC-------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEES
T ss_pred ccccccccceeEEEcCCcc-----cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCC
Confidence 0000011234556554211 114578999999995 468999999999999999752 222 22111
Q ss_pred -cceeeeEEEEEecCCcEEEEEe--CCCeEEE
Q psy14961 220 -SILFGATSVDFSVSGRLLFAGY--NDYTINV 248 (320)
Q Consensus 220 -~~~~~~~~~~~s~~~~~l~~g~--~dg~v~~ 248 (320)
.....+.+++|++++-.|...+ ..|.|.-
T Consensus 176 d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 176 DARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred CcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 1113467899999887777755 7788754
No 301
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.35 E-value=0.77 Score=43.94 Aligned_cols=197 Identities=9% Similarity=-0.040 Sum_probs=104.7
Q ss_pred ccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCc----ceeeecccCccceeEEEEeeCCCCCEEE-EEeCCCeEEEEeC
Q psy14961 65 TSFISCCIFPNSDQQILTGS-GDCTCALWDVESS----QLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSDKLVNIWDM 138 (320)
Q Consensus 65 ~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~dg~i~lwd~ 138 (320)
...+..+.+....+.|+.+. ..+.|+.++++.. .....+.........+++.+ .+..|+ +-...+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~--~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW--IHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET--TTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee--cCCcEEEEecCCCeEEEEeC
Confidence 34556778876555665544 4578888887642 11222221223344555543 233343 4444556666665
Q ss_pred CCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-C-CCeEEEEECCCCeeEeEE
Q psy14961 139 RTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-D-DATCRLFDLRADKEVACY 216 (320)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~-dg~i~iwd~~~~~~~~~~ 216 (320)
....... .+.........|+++|.+..|+... . .+.|...++.........
T Consensus 501 dG~~~~~---------------------------l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 501 KGVKRKT---------------------------LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp TSSSEEE---------------------------EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred CCCeEEE---------------------------EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 4322111 0111223467899999766555443 2 368888888754433222
Q ss_pred ecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecC--CCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 217 KKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 217 ~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.. ....+..+++++.+..|+.+. ....|...++....+....... -....+|++.. ++++++-...+.|+.-+.
T Consensus 554 ~~--~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 554 TE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR 630 (791)
T ss_dssp CS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred eC--CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeC
Confidence 21 122356789998777776664 4568888887544333222221 12334666643 355666666677776653
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.27 E-value=0.73 Score=42.81 Aligned_cols=133 Identities=10% Similarity=0.056 Sum_probs=74.8
Q ss_pred CeEEEEEcCCCCEE-EEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe--CCCeEEEEcCCCCeE
Q psy14961 180 DVNSVKFHPSGDAV-ATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY--NDYTINVWDSLKCCR 256 (320)
Q Consensus 180 ~v~~v~~~p~g~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--~dg~v~~wd~~~~~~ 256 (320)
....+++++.+..| ++-...+.|.+.+++.......... ....+..++++|.+..|+... ..+.|...++.....
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~--~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 162 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeC--CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence 46789999965554 5556788999999876433222211 122356788999765555544 245676666543222
Q ss_pred EEEeecCCCceeEEEECcCC-CeEEEecCCCceEeeecchHhhhheeeeeeecCCcceEE
Q psy14961 257 VNHLMGHENRVSCLQVSPDG-TAFSSGSWDTTLRDEESKNRYVQYLLRSRITKPTQGLTV 315 (320)
Q Consensus 257 ~~~~~~h~~~i~~i~~s~~~-~~l~s~s~D~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (320)
..-....-...+.|++++++ +++++-+....|+..+.....++.+.......| .||++
T Consensus 163 ~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P-~gi~~ 221 (619)
T 3s94_A 163 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP-FALTL 221 (619)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------C-CCEEE
T ss_pred EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCc-eEEEE
Confidence 22122234567899999864 455555566778877765544444444344555 36554
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.26 E-value=0.027 Score=53.24 Aligned_cols=195 Identities=11% Similarity=-0.012 Sum_probs=96.8
Q ss_pred eEEEEecCCCCEEEEEe-CCCeEEEEECCC----cceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCc
Q psy14961 68 ISCCIFPNSDQQILTGS-GDCTCALWDVES----SQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGY 142 (320)
Q Consensus 68 v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~ 142 (320)
...+.|.+.++.|+.+. ..+.|+.+++.+ ......+.........+++.+. .++++++-...+.|.+.++....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~-~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS-SSBCEECCTTTSCEEEEBSSSCC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee-CCcEEEEeccCCeEEEEecCCCc
Confidence 34566766666666654 457888888865 1211111111112233444221 22333333344556666654322
Q ss_pred EEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEee-C-CCeEEEEECCCCeeEeEEecCc
Q psy14961 143 CVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGS-D-DATCRLFDLRADKEVACYKKDS 220 (320)
Q Consensus 143 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s-~-dg~i~iwd~~~~~~~~~~~~~~ 220 (320)
.... +.........|+++|.+..|+.+. . .+.|...++...... .+...
T Consensus 487 ~~~l---------------------------~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~l~~~- 537 (699)
T 1n7d_A 487 RKTL---------------------------FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTE- 537 (699)
T ss_dssp EEEE---------------------------CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-EESCS-
T ss_pred eEEE---------------------------EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-EEEeC-
Confidence 1110 111112235678888655554433 2 267877777543221 11111
Q ss_pred ceeeeEEEEEecCCcEEEEE-eCCCeEEEEcCCCCeEEEEee--cCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 221 ILFGATSVDFSVSGRLLFAG-YNDYTINVWDSLKCCRVNHLM--GHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 221 ~~~~~~~~~~s~~~~~l~~g-~~dg~v~~wd~~~~~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.......++|+|++..|+.+ +..+.|..+++....+...+. +.......|++..+ .++++....+.|...+.
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 12234678899986655555 456789999875432221111 11122345666554 56667766778887774
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.25 E-value=0.4 Score=39.70 Aligned_cols=65 Identities=17% Similarity=0.189 Sum_probs=34.9
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC-----eEEEEcCCCCe
Q psy14961 189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY-----TINVWDSLKCC 255 (320)
Q Consensus 189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-----~v~~wd~~~~~ 255 (320)
++..++.|+.+ ..+.+||+.+.+=...-......... .+ ...++++++.|+.++ .+.+||..+..
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~-~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA-GV-CAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EE-EEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC-eE-EEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 45666777654 36888998765422111111111111 12 223677878877543 47888876543
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.19 E-value=0.8 Score=42.53 Aligned_cols=85 Identities=7% Similarity=0.008 Sum_probs=53.3
Q ss_pred eEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeecCCCceeEEEECc-CCCeEEEecCCCceEeeecchHhhhhee
Q psy14961 225 ATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSP-DGTAFSSGSWDTTLRDEESKNRYVQYLL 302 (320)
Q Consensus 225 ~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D~~ir~~~~~~~~~~~~~ 302 (320)
+..++|++.+..|+... ..+.|.-++.............-.....||+.+ .++++.+-+..++|.+-+.....+..+.
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~ 430 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILI 430 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEE
Confidence 46788998666555554 577888888654333222222334677999986 5667777677788888876655554444
Q ss_pred eeeeecC
Q psy14961 303 RSRITKP 309 (320)
Q Consensus 303 ~~~~~~~ 309 (320)
..++..|
T Consensus 431 ~~~l~~P 437 (619)
T 3s94_A 431 SEDLEEP 437 (619)
T ss_dssp CTTCCSE
T ss_pred ECCCCCe
Confidence 4344443
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.06 E-value=0.51 Score=39.09 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=50.8
Q ss_pred CCCEEEEeeCC-------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeE
Q psy14961 189 SGDAVATGSDD-------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCR 256 (320)
Q Consensus 189 ~g~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~ 256 (320)
+++.++.|+.+ ..+.+||+.+.+=...-......... ++. ..++++++.|+.+ ..+.+||..+..-
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA-GVG-VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc-cEE-EECCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 45556666532 35888898765422111111111111 222 2367888887653 4688899776433
Q ss_pred E--EEeecCCCceeEEEECcCCCeEEEecCCCc-----eEeeec
Q psy14961 257 V--NHLMGHENRVSCLQVSPDGTAFSSGSWDTT-----LRDEES 293 (320)
Q Consensus 257 ~--~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~-----ir~~~~ 293 (320)
. ..+......-. +...++++++.|+.++. +.++|.
T Consensus 233 ~~~~~~~~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 233 RQVADMNMCRRNAG--VCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp EEECCCSSCCBSCE--EEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred eeCCCCCCccccCe--EEEECCEEEEECCcCCCcccccEEEEcC
Confidence 2 21111111111 22237888899987653 455554
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.06 E-value=0.51 Score=39.14 Aligned_cols=64 Identities=8% Similarity=0.013 Sum_probs=34.0
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961 189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC 254 (320)
Q Consensus 189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~ 254 (320)
+++.++.|+.+ ..+.+||+.+.+=...-...........+. -++.+++.|+.+ ..+..||..+.
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA--VGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE--ETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE--ECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 45566666643 357889987653211111111111112222 267788888743 56888887664
No 308
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.99 E-value=0.72 Score=40.23 Aligned_cols=223 Identities=9% Similarity=-0.018 Sum_probs=118.1
Q ss_pred EEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEe-CCCeEEEEECCCcc----eeeecccCc
Q psy14961 33 VVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGS-GDCTCALWDVESSQ----LLQSFHGHT 107 (320)
Q Consensus 33 ~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~----~~~~~~~~~ 107 (320)
+|+.+. ...|+..+++.... ..+......+..+.|.+.++.|+.+. ..+.|+.++++... ....+....
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~-----~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEY-----TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSC-----EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred eeEEec-cceeEEEccCCcce-----eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 444443 35677776643211 11222334567788887666666654 46788888876521 112122122
Q ss_pred cceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEc
Q psy14961 108 GELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFH 187 (320)
Q Consensus 108 ~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~ 187 (320)
.....+++.+. .+++..+-...+.|.+.++....... .+.........|+++
T Consensus 159 ~~p~glavD~~-~~~lY~~d~~~~~I~~~~~~g~~~~~---------------------------l~~~~~~~P~~iavd 210 (400)
T 3p5b_L 159 QAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVKRKT---------------------------LFRENGSKPRAIVVD 210 (400)
T ss_dssp SCEEEEEEETT-TTEEEEEETTTTEEEEECTTTCSEEE---------------------------EEECSSCCEEEEEEE
T ss_pred CCcccEEEEec-CCceEEEECCCCeEEEEeCCCCceEE---------------------------EEeCCCCCcceEEEe
Confidence 23344555432 23333343445566666654332111 011122245789999
Q ss_pred CCCCEEEEee--CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-CCCeEEEEcCCCCeEEEEeec--
Q psy14961 188 PSGDAVATGS--DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY-NDYTINVWDSLKCCRVNHLMG-- 262 (320)
Q Consensus 188 p~g~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~~~~~~~~~-- 262 (320)
|.+..|+-.. ..+.|...+++.......... ....+..++++|++..|+.+. ..+.|..+|.....+......
T Consensus 211 p~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~--~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~ 288 (400)
T 3p5b_L 211 PVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK 288 (400)
T ss_dssp TTTTEEEEEECSSSCCEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS
T ss_pred cccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC--CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC
Confidence 9766655443 246888888875433222221 122357789998888777765 567899998754333222222
Q ss_pred CCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 263 HENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 263 h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.-....+|++ ..+.++.+....+.|+..+
T Consensus 289 ~l~~P~gl~v-~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 289 RLAHPFSLAV-FEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp TTSSEEEEEE-ETTEEEEEESSSCSEEEEE
T ss_pred CCCCCEEEEE-eCCEEEEecCCCCeEEEEE
Confidence 2234457777 3455677776777787776
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.93 E-value=0.69 Score=39.59 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=39.3
Q ss_pred eEEEEE-------ecCCcEEEEEeCCCeEEEEcCCCC-eE--EEEee-cCCCceeEEEECcCCCeEEEec
Q psy14961 225 ATSVDF-------SVSGRLLFAGYNDYTINVWDSLKC-CR--VNHLM-GHENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 225 ~~~~~~-------s~~~~~l~~g~~dg~v~~wd~~~~-~~--~~~~~-~h~~~i~~i~~s~~~~~l~s~s 283 (320)
+..+.| ..+|.++++....+.|...+.... .. ...+. +-...+..|++.|||.++++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 456677 357877777777788888776532 22 12333 2235789999999998877764
No 310
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.87 E-value=0.71 Score=39.22 Aligned_cols=68 Identities=6% Similarity=0.007 Sum_probs=34.5
Q ss_pred CCCEEEEecCC-CeEEEEEecccCCccccccccc-ccccCeEEEEecCCCCEEEEEeC-C---------CeEEEEECCCc
Q psy14961 30 SGSVVASGGLD-NKVTVYAIALEDDSSAKKKTVA-THTSFISCCIFPNSDQQILTGSG-D---------CTCALWDVESS 97 (320)
Q Consensus 30 ~~~~l~s~~~d-g~i~v~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~-d---------g~v~iwd~~~~ 97 (320)
++.+++.||.+ ..+.+||+............+. .....-.++.. ++..++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 66666766654 4677777642223333332222 11111222333 3556666665 2 46888998876
Q ss_pred ce
Q psy14961 98 QL 99 (320)
Q Consensus 98 ~~ 99 (320)
+-
T Consensus 97 ~W 98 (357)
T 2uvk_A 97 SW 98 (357)
T ss_dssp EE
T ss_pred cE
Confidence 53
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.80 E-value=0.79 Score=39.27 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=63.1
Q ss_pred CeEEEEEcCCCCEEEEee-----------------CCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe-
Q psy14961 180 DVNSVKFHPSGDAVATGS-----------------DDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY- 241 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s-----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~- 241 (320)
..+.+.+.++|...++.. ..|.+..+|. ++...... .......++||||++.|+.+.
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~---~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE---GFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE---EESSEEEEEECTTSSEEEEEEG
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeec---CCcccCcceECCCCCEEEEEeC
Confidence 578899999998766653 1244555554 32111111 122357899999998887765
Q ss_pred CCCeEEEEcCCC-CeE--EEEeecCCCceeEEEECc-CCCeEEEecCC
Q psy14961 242 NDYTINVWDSLK-CCR--VNHLMGHENRVSCLQVSP-DGTAFSSGSWD 285 (320)
Q Consensus 242 ~dg~v~~wd~~~-~~~--~~~~~~h~~~i~~i~~s~-~~~~l~s~s~D 285 (320)
..+.|..|+... +.. ...+ ......-.+++.+ +|++.+++..+
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 578899998642 221 2223 2345678899999 59988877654
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.78 E-value=1.2 Score=41.33 Aligned_cols=136 Identities=14% Similarity=0.210 Sum_probs=80.9
Q ss_pred CeEEEEEcCCCCEEE-EeeCCCeEEEEECCCCeeEeEEecC----cceeeeEEEEEecCCcEEE-EEeCCCeEEEEcCCC
Q psy14961 180 DVNSVKFHPSGDAVA-TGSDDATCRLFDLRADKEVACYKKD----SILFGATSVDFSVSGRLLF-AGYNDYTINVWDSLK 253 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~-~g~~dg~v~~wd~~~ 253 (320)
.+..++|++.++.|+ +=...+.|..++++........... .....+..+++...+..|+ +-+..+.|.+.++..
T Consensus 341 ~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G 420 (628)
T 4a0p_A 341 NVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG 420 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCC
Confidence 466889988665554 4445678888887643322222110 0112356788888766554 555678899988754
Q ss_pred CeEEEEee-cCCCceeEEEECc-CCCeEEEecCCC--ceEeeecchHhhhheeeeeeecCCcceEEEe
Q psy14961 254 CCRVNHLM-GHENRVSCLQVSP-DGTAFSSGSWDT--TLRDEESKNRYVQYLLRSRITKPTQGLTVYF 317 (320)
Q Consensus 254 ~~~~~~~~-~h~~~i~~i~~s~-~~~~l~s~s~D~--~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (320)
. ....+. .......+|++.| +|.++.+-.... .|...+.....++.+...++..| .||++..
T Consensus 421 ~-~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P-~gla~D~ 486 (628)
T 4a0p_A 421 R-SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKP-IALALDS 486 (628)
T ss_dssp C-EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCE-EEEEEET
T ss_pred C-eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCc-cEEEEeC
Confidence 3 333333 3456789999999 777777654333 34444444444444555556666 7887764
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.73 E-value=0.73 Score=38.32 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=47.7
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeEEE
Q psy14961 189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCRVN 258 (320)
Q Consensus 189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~~~ 258 (320)
++..++.|+.+ ..+.++|+.+.+=...-...........+. -++++++.|+.+ ..+.+||..+..-..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 45666666654 458888887654221111111111112222 267777887654 568889976653321
Q ss_pred --EeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961 259 --HLMGHENRVSCLQVSPDGTAFSSGSWDT 286 (320)
Q Consensus 259 --~~~~h~~~i~~i~~s~~~~~l~s~s~D~ 286 (320)
.+......-..+. -++++++.||.++
T Consensus 246 ~~~~p~~r~~~~~~~--~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 246 VAPMKHRRSALGITV--HQGRIYVLGGYDG 273 (308)
T ss_dssp CCCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred CCCCCCCccceEEEE--ECCEEEEEcCcCC
Confidence 1111111112222 3678889888664
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.53 E-value=0.026 Score=44.76 Aligned_cols=104 Identities=9% Similarity=0.032 Sum_probs=61.5
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcce-----eeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSIL-----FGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
.+..++|+|+|...+. .+|.+.-.+..+......+.....+ .....+.|.|+|.+.++ .||.|.-++.-+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 4568999999885555 6777666665442211111110000 01256789999988777 5698887764221
Q ss_pred eEE-----EEeecC--CCceeEEEECcCCCeEEEecCCCceE
Q psy14961 255 CRV-----NHLMGH--ENRVSCLQVSPDGTAFSSGSWDTTLR 289 (320)
Q Consensus 255 ~~~-----~~~~~h--~~~i~~i~~s~~~~~l~s~s~D~~ir 289 (320)
... .+..+- =..+..|.|.|+|.+.+.. |+.+.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 110 111111 1467999999999988877 67653
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.51 E-value=1 Score=38.56 Aligned_cols=110 Identities=7% Similarity=0.057 Sum_probs=64.6
Q ss_pred eEEEEEcC--CCC-EEEEe-eC--CCeEEEEECCCCe--e--EeEEecCcceeeeEEEEEecCCcEEEEEe---------
Q psy14961 181 VNSVKFHP--SGD-AVATG-SD--DATCRLFDLRADK--E--VACYKKDSILFGATSVDFSVSGRLLFAGY--------- 241 (320)
Q Consensus 181 v~~v~~~p--~g~-~l~s~-s~--dg~i~iwd~~~~~--~--~~~~~~~~~~~~~~~~~~s~~~~~l~~g~--------- 241 (320)
...+.+.+ +|. +|+.+ .. +.++.+|++.... . +..+.. ........+.+.++|.+.++..
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 44566655 343 34333 33 5678888765432 1 112222 2334567899999999888754
Q ss_pred --------CCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEE-ecCCCceEeeecc
Q psy14961 242 --------NDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSS-GSWDTTLRDEESK 294 (320)
Q Consensus 242 --------~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s-~s~D~~ir~~~~~ 294 (320)
..|.|.-+|.... ..+...-..-+.|+||||++.|.. -+..+.|+.++..
T Consensus 193 ~~e~~~~~~~g~vyr~d~~~~---~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSPNDV---RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HHHHHTTCCCEEEEEECTTCC---EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cchhhccCCccEEEEEECCeE---EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 1245555665322 222222345689999999976554 4567888888864
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.37 E-value=0.61 Score=39.88 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=59.4
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC---cceeeeEEEEEecC---CcEEEEEeC-C-----CeEE
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD---SILFGATSVDFSVS---GRLLFAGYN-D-----YTIN 247 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~s~~---~~~l~~g~~-d-----g~v~ 247 (320)
.-..++|.|+|+.+++ ..+|.|.+++ .++........ ........++|+|+ +..|+++.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 3468999999985554 5669999998 33321111111 01124578999998 555555543 2 5677
Q ss_pred EEcCCCC-----eEE-EEee---cCCCceeEEEECcCCCeEEEec
Q psy14961 248 VWDSLKC-----CRV-NHLM---GHENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 248 ~wd~~~~-----~~~-~~~~---~h~~~i~~i~~s~~~~~l~s~s 283 (320)
.|+.... +.+ ..+. +.......|+|.|||.++++-+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 7775432 112 1122 1112346899999998877754
No 317
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.98 E-value=1.4 Score=37.07 Aligned_cols=228 Identities=11% Similarity=0.090 Sum_probs=110.2
Q ss_pred cceEEEEEcCCCCEEEEecCCCeEEEEEecccCCccccccc-ccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCcc
Q psy14961 20 TWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKT-VATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESSQ 98 (320)
Q Consensus 20 ~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 98 (320)
..+.++.|.+++..++.| ..|.| |.............. .......+..+.+.+ +.++.++.++.|.. ..+.++
T Consensus 36 ~~~~~v~~~~~~~~~~~G-~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVG-VNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SCEEEEEESSSSCEEEEE-TTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEEETTEEEE-ESSTTS
T ss_pred CcEEEEEECCCCcEEEEc-CCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEECCCeEEE-ECCCCC
Confidence 468899998888777754 56654 322211222222111 111234577788864 34555566665543 223333
Q ss_pred eeeecc---cCccceeEEEEeeCCCCCEEEEEeCCCeE-EEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961 99 LLQSFH---GHTGELMDLDLAPSETGNTFVSGSSDKLV-NIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF 174 (320)
Q Consensus 99 ~~~~~~---~~~~~v~~~~~~~~~~~~~l~s~~~dg~i-~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 174 (320)
--.... .+.+.+..+.+.. ++..++ ++.++.| +-.| .|+. |.. + .
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~--~~~~~~-~~~~g~v~~S~D--gG~t-------------------W~~-----~--~ 158 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALG--NGSAEM-ITNVGAIYRTKD--SGKN-------------------WQA-----L--V 158 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEE--TTEEEE-EETTCCEEEESS--TTSS-------------------EEE-----E--E
T ss_pred CceECccccCCCCCeEEEEEEC--CCCEEE-EeCCccEEEEcC--CCCC-------------------CEE-----e--e
Confidence 211111 1223444454432 334444 3344433 1111 1110 110 0 0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCC
Q psy14961 175 EGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKC 254 (320)
Q Consensus 175 ~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~ 254 (320)
.++...+..+++.|++.+++.+...+..+-.|-. ++.-...... .......+.+++++..++. +.+|.+.+.+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRT-TSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNS 235 (327)
T ss_dssp CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECC-SSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEE
T ss_pred cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCC-CCCccceeEECCCCCEEEE-eCCceEEEecCCCC
Confidence 1233467889999988877766544444444421 1111111111 1123466778888876644 45787777632212
Q ss_pred eEEEEee----cCCCceeEEEECcCCCeEEEecCCCce
Q psy14961 255 CRVNHLM----GHENRVSCLQVSPDGTAFSSGSWDTTL 288 (320)
Q Consensus 255 ~~~~~~~----~h~~~i~~i~~s~~~~~l~s~s~D~~i 288 (320)
..-..+. .+...+.++++.+++.+++.+. ++.+
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 2111111 1234688999999888777665 5655
No 318
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.84 E-value=0.66 Score=39.72 Aligned_cols=102 Identities=11% Similarity=0.038 Sum_probs=58.7
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCe-eEeEEec-CcceeeeEEEEEecC---CcEEEEEeC----C----CeE
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADK-EVACYKK-DSILFGATSVDFSVS---GRLLFAGYN----D----YTI 246 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~-~~~~~~~-~~~~~~~~~~~~s~~---~~~l~~g~~----d----g~v 246 (320)
....++|.|+|+.++ +..+|.|.++|. .++ .+..... .........++|+|+ +..|++... + ..|
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 457899999997544 456699999973 343 1111110 001123567899998 555555443 2 567
Q ss_pred EEEcCCCC-------eEE-EEeec-CCCceeEEEECcCCCeEEEec
Q psy14961 247 NVWDSLKC-------CRV-NHLMG-HENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 247 ~~wd~~~~-------~~~-~~~~~-h~~~i~~i~~s~~~~~l~s~s 283 (320)
..|+.... +.+ ..+.. .......|+|.|||.++++-+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 66764432 111 11221 112347899999999888754
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.74 E-value=1.5 Score=36.32 Aligned_cols=64 Identities=14% Similarity=0.151 Sum_probs=33.7
Q ss_pred CCCEEEEeeCC-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCC
Q psy14961 189 SGDAVATGSDD-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKC 254 (320)
Q Consensus 189 ~g~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~ 254 (320)
++..++.|+.+ ..+.+||+.+.+=............ .++.. .++++++.|+.+ ..+.+||..+.
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA-LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc-eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 45666777654 4688999876542211111111111 12222 367777777643 35777776654
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.71 E-value=1.7 Score=36.74 Aligned_cols=207 Identities=13% Similarity=0.186 Sum_probs=104.9
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeee
Q psy14961 24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQS 102 (320)
Q Consensus 24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~ 102 (320)
+.-.+|..+.||--. ...+.+++++. ..+.+..... ..|..=.|-.+. .|+--. +..|.-|+++. ..+.+.
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnlet----K~klks~~~~-e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kv 142 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEM----KSKMKAHTMT-DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKM 142 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTT----TEEEEEEECS-SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHH----hhhhcceecC-CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCcee
Confidence 344789888887765 67899999853 1222222222 344444454433 333333 45899999874 355555
Q ss_pred cccCcc--ceeEEEEeeCCCCCEEEEEeC-------CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961 103 FHGHTG--ELMDLDLAPSETGNTFVSGSS-------DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 103 ~~~~~~--~v~~~~~~~~~~~~~l~s~~~-------dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 173 (320)
+..|.. ...-+.+..+++.+.++..+- .|.+.||....+ ..+.+++|..... ...
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~---------------~~~ 206 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFA---------------QFK 206 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEE---------------EEC
T ss_pred eecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeE---------------EEe
Confidence 554432 223355666777777764432 234445544332 1222222221100 000
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC---ee------EeE-EecCcceeeeEEEEEecCCcEEEEEeCC
Q psy14961 174 FEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRAD---KE------VAC-YKKDSILFGATSVDFSVSGRLLFAGYND 243 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~---~~------~~~-~~~~~~~~~~~~~~~s~~~~~l~~g~~d 243 (320)
+.+...+..=++|... ....++++|-++... .+ +.. ++.+...--+.++.+|+.-..++.-+.-
T Consensus 207 ~~g~~~~~~lf~fa~r------~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~ 280 (365)
T 2xzh_A 207 MEGNAEESTLFCFAVR------GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 280 (365)
T ss_dssp CTTCSSCEEEEEEEEE------ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETT
T ss_pred cCCCCCCceEEEEEEe------cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCC
Confidence 1111111111111110 011258888887432 11 111 1111111113567778877888888999
Q ss_pred CeEEEEcCCCCeEEEEe
Q psy14961 244 YTINVWDSLKCCRVNHL 260 (320)
Q Consensus 244 g~v~~wd~~~~~~~~~~ 260 (320)
|-+++||+.++..+..-
T Consensus 281 G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 281 GYIHLYDLETGTCIYMN 297 (365)
T ss_dssp SEEEEEETTTCCEEEEE
T ss_pred cEEEEEEcccCcEEEEe
Confidence 99999999998877543
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.70 E-value=1.1 Score=39.81 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=59.4
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc------ceeeeEEEEEecC---CcEEEEEeC--------
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS------ILFGATSVDFSVS---GRLLFAGYN-------- 242 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~s~~---~~~l~~g~~-------- 242 (320)
....|+|.|+|+.+++-...+.|++++...++......... ...+...++|+|+ +..|+....
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45689999999977765544578888765443322111111 1123457899996 555555442
Q ss_pred -----CCeEEEEcCCC--C-----eEEEE-ee-cCCCceeEEEECcCCCeEEEecC
Q psy14961 243 -----DYTINVWDSLK--C-----CRVNH-LM-GHENRVSCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 243 -----dg~v~~wd~~~--~-----~~~~~-~~-~h~~~i~~i~~s~~~~~l~s~s~ 284 (320)
...|.-|+... . +.+.. +. ........|+|.|||+++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 12444444321 1 11211 21 11234789999999998887654
No 322
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.65 E-value=3 Score=39.27 Aligned_cols=231 Identities=14% Similarity=0.173 Sum_probs=104.8
Q ss_pred CCCCEEEEecCC----CeEEEEEecccCCcccccc-c-----ccccccCeEEEEecCCCCEEEEEeCC------CeEEEE
Q psy14961 29 PSGSVVASGGLD----NKVTVYAIALEDDSSAKKK-T-----VATHTSFISCCIFPNSDQQILTGSGD------CTCALW 92 (320)
Q Consensus 29 ~~~~~l~s~~~d----g~i~v~~~~~~~~~~~~~~-~-----~~~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iw 92 (320)
.++.+++.||.+ ..+.+||... ....... . +......-.++....++..++.|+.+ ..+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~--~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHY--DKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECS--SCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCC--CeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 567777778753 4577777642 2222221 1 11111112233332255666777643 357788
Q ss_pred ECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCC--eEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCee
Q psy14961 93 DVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDK--LVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYC 170 (320)
Q Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg--~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 170 (320)
|+.+..-... .....+....+.+...++..++.|+.++ .+.+||..+......-. .+.
T Consensus 474 d~~t~~W~~~-~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~------------------~g~- 533 (695)
T 2zwa_A 474 DMKTREWSMI-KSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP------------------KDE- 533 (695)
T ss_dssp ETTTTEEEEC-CCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC------------------SSG-
T ss_pred eCCCCcEEEC-CCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC------------------CCC-
Confidence 8877543221 1111111111112112466777776554 56777776654221100 000
Q ss_pred eeeecCCCCCeEEEEEcCC-CCEEEEeeC--C-----CeEEEEECCCCee-----EeEEecC-cceeeeEEEEEecCCcE
Q psy14961 171 VQSFEGHQSDVNSVKFHPS-GDAVATGSD--D-----ATCRLFDLRADKE-----VACYKKD-SILFGATSVDFSVSGRL 236 (320)
Q Consensus 171 ~~~~~~~~~~v~~v~~~p~-g~~l~s~s~--d-----g~i~iwd~~~~~~-----~~~~~~~-~~~~~~~~~~~s~~~~~ 236 (320)
.......-.++.+..+ +..++.|+. + +.+..||+.+.+- ....... .......++....++.+
T Consensus 534 ---~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~i 610 (695)
T 2zwa_A 534 ---FFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKL 610 (695)
T ss_dssp ---GGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEE
T ss_pred ---CCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEE
Confidence 0001111123455554 556667765 2 4588899887651 1111111 11111123333344778
Q ss_pred EEEEeC--------CCeEEEEcCCCCeEEEE-eecC------CCce-eEEEECcCCCeEEEecC
Q psy14961 237 LFAGYN--------DYTINVWDSLKCCRVNH-LMGH------ENRV-SCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 237 l~~g~~--------dg~v~~wd~~~~~~~~~-~~~h------~~~i-~~i~~s~~~~~l~s~s~ 284 (320)
++.|+. ...+.+||..+..-... +... ...+ .+.+.-+++++++.||.
T Consensus 611 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 611 LIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred EEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 888773 34688999876543310 0000 0000 23344456688888874
No 323
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.60 E-value=1.9 Score=36.78 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=60.6
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecC----cceeeeEEEEEecC---CcEEEEEe---CCCeEEEE
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKD----SILFGATSVDFSVS---GRLLFAGY---NDYTINVW 249 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~s~~---~~~l~~g~---~dg~v~~w 249 (320)
....|+|.|+|..+++--..|.|++++...++........ ....+...++|+|+ +..|+... .++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 4578999999997776655899999986554432111111 11124567899995 34454432 34455555
Q ss_pred cCCC----------CeEE-EEee-cCCCceeEEEECcCCCeEEEecC
Q psy14961 250 DSLK----------CCRV-NHLM-GHENRVSCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 250 d~~~----------~~~~-~~~~-~h~~~i~~i~~s~~~~~l~s~s~ 284 (320)
.... .+.+ ..+. +.......|+|.|||.++++.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 4322 1222 1221 11123567999999998888653
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.22 E-value=2.2 Score=36.04 Aligned_cols=202 Identities=17% Similarity=0.188 Sum_probs=113.4
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc----cCeEEEEecCCC
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT----SFISCCIFPNSD 77 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~ 77 (320)
-|.|+++..++.++.+++ .|.=..|-.+.. |+-.. +..+..|+++.+.. ..+.+..|. ..|..-...++.
T Consensus 90 QiFnletK~klks~~~~e-~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~---P~kvFdR~~~L~~~QIInY~~d~~~ 163 (365)
T 2xzh_A 90 QIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQ 163 (365)
T ss_dssp EEEETTTTEEEEEEECSS-CEEEEEECSSSE-EEEEE-SSEEEEEESSTTCC---CEEEEECCGGGTTCEEEEEEECTTS
T ss_pred EEechHHhhhhcceecCC-ccEEEEecCCCe-EEEEc-CCcEEEEcccCCCC---CceeeecchhcccceEEEEEECCCC
Confidence 477888888888888764 455455655543 33333 35799999864221 222222222 223333446666
Q ss_pred CEEEEEe-------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEE-EeC---CCeEEEEeCCCC---c-
Q psy14961 78 QQILTGS-------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVS-GSS---DKLVNIWDMRTG---Y- 142 (320)
Q Consensus 78 ~~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s-~~~---dg~i~lwd~~~~---~- 142 (320)
++++..+ -.|.+.+|..+.+ ..+.+++|-+.-..+.+...+....|++ +.. .+.+++-++... .
T Consensus 164 kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~ 242 (365)
T 2xzh_A 164 KWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ 242 (365)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCC
T ss_pred CEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCC
Confidence 7654322 1378889998754 3456677755433332221111122333 222 257888887332 1
Q ss_pred -----EEEEe-cc--------------CC---ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961 143 -----CVQSF-EG--------------HH---NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD 199 (320)
Q Consensus 143 -----~~~~~-~~--------------~~---~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d 199 (320)
.+..+ .. .. ..++.-|.+++||++++.++..-+--.+.|..-+.+++..-++...+.
T Consensus 243 ~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~ 322 (365)
T 2xzh_A 243 PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK 322 (365)
T ss_dssp CCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETT
T ss_pred CcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCC
Confidence 11111 11 00 123567899999999999988765556677766666665566677778
Q ss_pred CeEEEEECCCC
Q psy14961 200 ATCRLFDLRAD 210 (320)
Q Consensus 200 g~i~iwd~~~~ 210 (320)
|.+.-..++..
T Consensus 323 GqVl~v~v~~~ 333 (365)
T 2xzh_A 323 GQVLSVCVEEE 333 (365)
T ss_dssp CEEEEEEECTT
T ss_pred CEEEEEEECcc
Confidence 87776666544
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.78 E-value=3.3 Score=36.49 Aligned_cols=200 Identities=12% Similarity=0.162 Sum_probs=105.9
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeee
Q psy14961 24 ACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQS 102 (320)
Q Consensus 24 ~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~ 102 (320)
+.-.+|..+.||--. ...+.||+++. ..+.+.....+..+.=-|.+++ .|+--. +..|.-|+++. ..+.+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~----K~klks~~~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kv 141 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEM----KSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKM 141 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTT----TEEEEEEECSSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHH----hhhhcceecCCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhh
Confidence 345788888887765 67999999853 2222223333333333333432 333332 45899999864 355555
Q ss_pred cccCcc--ceeEEEEeeCCCCCEEEEEeC-------CCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeee
Q psy14961 103 FHGHTG--ELMDLDLAPSETGNTFVSGSS-------DKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQS 173 (320)
Q Consensus 103 ~~~~~~--~v~~~~~~~~~~~~~l~s~~~-------dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 173 (320)
+..|.. ..--+.+..+++.++++..+- .|.+.+|....+. .+.
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----------------------------sQ~ 193 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----------------------------SQP 193 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----------------------------EEE
T ss_pred eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----------------------------cch
Confidence 554432 223355666777787764431 2344555543321 222
Q ss_pred ecCCCCCeEEEEEcCC---CCEEEEeeC---CCeEEEEECCCC---ee------EeE-EecCcceeeeEEEEEecCCcEE
Q psy14961 174 FEGHQSDVNSVKFHPS---GDAVATGSD---DATCRLFDLRAD---KE------VAC-YKKDSILFGATSVDFSVSGRLL 237 (320)
Q Consensus 174 ~~~~~~~v~~v~~~p~---g~~l~s~s~---dg~i~iwd~~~~---~~------~~~-~~~~~~~~~~~~~~~s~~~~~l 237 (320)
++||...-.++.+.-+ ...++.+.. .++++|-++... .+ +.. ++.+...--..++.+|+.-..+
T Consensus 194 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygvi 273 (494)
T 1bpo_A 194 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 273 (494)
T ss_dssp ECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEE
T ss_pred heeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEE
Confidence 3333221111111100 011222222 368899888532 11 111 1111111123567788888888
Q ss_pred EEEeCCCeEEEEcCCCCeEEEE
Q psy14961 238 FAGYNDYTINVWDSLKCCRVNH 259 (320)
Q Consensus 238 ~~g~~dg~v~~wd~~~~~~~~~ 259 (320)
+.-+.-|.+++||+.++..+..
T Consensus 274 yviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEETTSEEEEEETTTCCEEEE
T ss_pred EEEecCceEEEEecccceeeee
Confidence 8999999999999999887743
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.73 E-value=4.6 Score=41.18 Aligned_cols=201 Identities=13% Similarity=0.191 Sum_probs=98.7
Q ss_pred EEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccccCeEEEEecCCCCEEEEEeCCCeEEEEECCC-cceeeec
Q psy14961 25 CAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVES-SQLLQSF 103 (320)
Q Consensus 25 ~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~ 103 (320)
...+|..+.||--. ...+.||+++.. .+.+...... .|..=.|-.+...-+++ +..|.-|++.. ..+...+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k----~klks~~~~e-~VvfWkWis~~~l~lVT--~~aVyHW~~~~~s~P~k~f 142 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMK----SKMKAHTMTD-DVTFWKWISLNTVALVT--DNAVYHWSMEGESQPVKMF 142 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHh----hhhcccccCC-CceEEEecCCCeeEEEc--CCeEEEeccCCCCccHHHH
Confidence 34688888777654 678999998532 2222222223 34333443333232222 45899999964 3455555
Q ss_pred ccCcc--ceeEEEEeeCCCCCEEEEEe-------CCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeee
Q psy14961 104 HGHTG--ELMDLDLAPSETGNTFVSGS-------SDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSF 174 (320)
Q Consensus 104 ~~~~~--~v~~~~~~~~~~~~~l~s~~-------~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 174 (320)
..|.. ..--+....+++.++++..+ ..|.+.+|....+. .+.++||..... . ..+
T Consensus 143 dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~---~------------~~~ 206 (1630)
T 1xi4_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA---Q------------FKM 206 (1630)
T ss_pred hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhh---e------------ecc
Confidence 44421 12224555566777766433 23455555543321 122222221110 0 001
Q ss_pred cCCC--CCeEEEEEcCCCCEEEEeeCCCeEEEEECCCC---eeEe------E-EecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961 175 EGHQ--SDVNSVKFHPSGDAVATGSDDATCRLFDLRAD---KEVA------C-YKKDSILFGATSVDFSVSGRLLFAGYN 242 (320)
Q Consensus 175 ~~~~--~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~---~~~~------~-~~~~~~~~~~~~~~~s~~~~~l~~g~~ 242 (320)
.+.. ..+.|.+.. .. ..+.++|-++... .+.. . ++.+...--+.++..|+.-..+..-+.
T Consensus 207 ~~~~~~~~l~~f~~~--~~------~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk 278 (1630)
T 1xi4_A 207 EGNAEESTLFCFAVR--GQ------AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (1630)
T ss_pred CCCCCCceEEEEEEe--cC------CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEec
Confidence 1111 112222221 10 1257888887432 1110 0 111111111345667777778888889
Q ss_pred CCeEEEEcCCCCeEE
Q psy14961 243 DYTINVWDSLKCCRV 257 (320)
Q Consensus 243 dg~v~~wd~~~~~~~ 257 (320)
-|-+.+||+.++..+
T Consensus 279 ~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 279 YGYIHLYDLETGTCI 293 (1630)
T ss_pred CceEEEEecccchhh
Confidence 999999999887654
No 327
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.56 E-value=3.7 Score=36.37 Aligned_cols=21 Identities=33% Similarity=0.640 Sum_probs=14.9
Q ss_pred ecCCCceeEEEECcCCCeEEEe
Q psy14961 261 MGHENRVSCLQVSPDGTAFSSG 282 (320)
Q Consensus 261 ~~h~~~i~~i~~s~~~~~l~s~ 282 (320)
.+|.+ ...++|+|+|+++++-
T Consensus 225 ~G~RN-p~gla~dp~G~L~~~d 245 (454)
T 1cru_A 225 LGHRN-PQGLAFTPNGKLLQSE 245 (454)
T ss_dssp BCCSE-EEEEEECTTSCEEEEE
T ss_pred ECCCC-cceEEECCCCCEEEEe
Confidence 35554 5799999988876553
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.05 E-value=3.4 Score=35.18 Aligned_cols=101 Identities=12% Similarity=0.043 Sum_probs=51.2
Q ss_pred CeEEEEEcCC---CCEE-EEeeC-------CCeEEEEECCCCe-----eEeEEecCc----ceeeeEEEEEecCCcEEEE
Q psy14961 180 DVNSVKFHPS---GDAV-ATGSD-------DATCRLFDLRADK-----EVACYKKDS----ILFGATSVDFSVSGRLLFA 239 (320)
Q Consensus 180 ~v~~v~~~p~---g~~l-~s~s~-------dg~i~iwd~~~~~-----~~~~~~~~~----~~~~~~~~~~s~~~~~l~~ 239 (320)
....|+++|+ +..| ++-+. ...|..+++.... ....+.... .......+.|.|||.+.++
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 146 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA 146 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE
Confidence 4678999995 4444 43322 2356666654321 111111111 1111356899999975555
Q ss_pred EeC-------------CCeEEEEcCCCC-------------eEEEEeecCCCceeEEEECc-CCCeEEE
Q psy14961 240 GYN-------------DYTINVWDSLKC-------------CRVNHLMGHENRVSCLQVSP-DGTAFSS 281 (320)
Q Consensus 240 g~~-------------dg~v~~wd~~~~-------------~~~~~~~~h~~~i~~i~~s~-~~~~l~s 281 (320)
-+. .|.|.-.+.... .....-.+|.+ ...++|+| +|+++++
T Consensus 147 ~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn-p~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 147 LGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRN-PQGMAMNPWSNALWLN 214 (353)
T ss_dssp ECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSE-EEEEEEETTTTEEEEE
T ss_pred ECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcC-ccceEEECCCCCEEEE
Confidence 332 245665654321 11111234443 57899999 6766554
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.66 E-value=3.8 Score=33.95 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=26.0
Q ss_pred CCCEEEEeeCCC-----eEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC
Q psy14961 189 SGDAVATGSDDA-----TCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN 242 (320)
Q Consensus 189 ~g~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~ 242 (320)
+++.++.|+.++ .+.+||+.+.+=...-......... ++. ..++++++.|+.
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~ 252 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL-SLV-SLVGTLYAIGGF 252 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce-eEE-EECCEEEEECCc
Confidence 456667776544 5788888765322111111111111 222 236777777765
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.63 E-value=0.64 Score=42.17 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=67.1
Q ss_pred eEEEEEcCCCCEEEEee-CCCeEEEEECCCCee-----E----e-EEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEE
Q psy14961 181 VNSVKFHPSGDAVATGS-DDATCRLFDLRADKE-----V----A-CYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVW 249 (320)
Q Consensus 181 v~~v~~~p~g~~l~s~s-~dg~i~iwd~~~~~~-----~----~-~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~w 249 (320)
...+..+|||++++.++ .+.++.++|+..-.. + . .........+..-.+|+++|....+-.-|.+|.-|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 35788999999986665 588999999863111 0 0 01111123456778999999655666789999999
Q ss_pred cCCCC----------eEEEEeecCCCceeEEE------ECcCCCeEEEec---CCCce
Q psy14961 250 DSLKC----------CRVNHLMGHENRVSCLQ------VSPDGTAFSSGS---WDTTL 288 (320)
Q Consensus 250 d~~~~----------~~~~~~~~h~~~i~~i~------~s~~~~~l~s~s---~D~~i 288 (320)
++... ..+..+.-|-.+- .+. -.|||++|++.. .|+.+
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~lnK~skdrfl 461 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVALSKFSKDRFL 461 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEEESCCTTSSC
T ss_pred eccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEecccccccCc
Confidence 86532 2334444443322 222 257899998874 45544
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.50 E-value=4 Score=33.81 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=46.2
Q ss_pred CCCEEEEeeC-C-----CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCCC-----eEEEEcCCCCeEE
Q psy14961 189 SGDAVATGSD-D-----ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYNDY-----TINVWDSLKCCRV 257 (320)
Q Consensus 189 ~g~~l~s~s~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg-----~v~~wd~~~~~~~ 257 (320)
+++.++.|+. + ..+.++|+.+.+=...-........ .++. ..++++++.|+.++ .+..||..+..-.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSL-FGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhc-eEEE-EECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 4556667765 2 4688899876532111111111111 1222 23677777777543 5778887665332
Q ss_pred --EEeecCCCceeEEEECcCCCeEEEecCC
Q psy14961 258 --NHLMGHENRVSCLQVSPDGTAFSSGSWD 285 (320)
Q Consensus 258 --~~~~~h~~~i~~i~~s~~~~~l~s~s~D 285 (320)
..+......-..+ .-++++++.||.+
T Consensus 226 ~~~~~p~~r~~~~~~--~~~~~l~v~GG~~ 253 (315)
T 4asc_A 226 PFEAFPQERSSLSLV--SLVGTLYAIGGFA 253 (315)
T ss_dssp EECCCSSCCBSCEEE--EETTEEEEEEEEE
T ss_pred ECCCCCCcccceeEE--EECCEEEEECCcc
Confidence 2111111111222 2367888888874
No 332
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.29 E-value=5.6 Score=35.07 Aligned_cols=203 Identities=17% Similarity=0.191 Sum_probs=115.2
Q ss_pred eEeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc----cCeEEEEecCCC
Q psy14961 2 IIWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT----SFISCCIFPNSD 77 (320)
Q Consensus 2 ~~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~ 77 (320)
-|.|+++..++.++.+++. |.=..|-.+. .|+-.. +..+..|+++.+.. ..+.+..|. ..|..-...++.
T Consensus 89 QiFnle~K~klks~~~~e~-VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~---P~kvFdR~~~L~~~QIInY~~d~~~ 162 (494)
T 1bpo_A 89 QIFNIEMKSKMKAHTMTDD-VTFWKWISLN-TVALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQ 162 (494)
T ss_dssp EEEETTTTEEEEEEECSSC-CCEEEEEETT-EEEEEC-SSEEEEEESSSSCC---CEEEEECCGGGTTCEEEEEEECTTS
T ss_pred EEEchHHhhhhcceecCCC-ceEEEecCCC-eEEEEc-CCeeEEecccCCCC---chhheecchhcccceEEEEEECCCC
Confidence 3778888888888887754 4444454443 344443 35799999854221 222222232 223333446667
Q ss_pred CEEEEEe-------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEE-EEeCC---CeEEEEeCCCC---c-
Q psy14961 78 QQILTGS-------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFV-SGSSD---KLVNIWDMRTG---Y- 142 (320)
Q Consensus 78 ~~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-s~~~d---g~i~lwd~~~~---~- 142 (320)
++++..+ -.|.+.+|..+.+ ..+.+.+|-+.-..+.+...+....|+ .+... +.+++-++... .
T Consensus 163 kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~ 241 (494)
T 1bpo_A 163 KWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ 241 (494)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC
T ss_pred CeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC
Confidence 7765322 2478889998754 345667776544333332111112233 33322 67888887432 1
Q ss_pred -----EEEEe-c--------------cCC---ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCC
Q psy14961 143 -----CVQSF-E--------------GHH---NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDD 199 (320)
Q Consensus 143 -----~~~~~-~--------------~~~---~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~d 199 (320)
.+..+ . ... ..++.-|.+++||++++.++..-+--...|..-+.+++..-++...+.
T Consensus 242 ~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~ 321 (494)
T 1bpo_A 242 PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRK 321 (494)
T ss_dssp CCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred CccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccC
Confidence 11100 0 001 123567899999999999988766556677777776666667777788
Q ss_pred CeEEEEECCCCe
Q psy14961 200 ATCRLFDLRADK 211 (320)
Q Consensus 200 g~i~iwd~~~~~ 211 (320)
|.|.-..++...
T Consensus 322 GqVl~v~v~e~~ 333 (494)
T 1bpo_A 322 GQVLSVCVEEEN 333 (494)
T ss_dssp CEEEEEEECTTT
T ss_pred ceEEEEEEcccc
Confidence 877776665543
No 333
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.22 E-value=10 Score=37.97 Aligned_cols=251 Identities=16% Similarity=0.261 Sum_probs=121.9
Q ss_pred cCCCCEEEEecCCCeEEEEEecccCCccc--ccccc----cccccCeEEEEecCCCCEEEEEeCCCeEEEEECCCc----
Q psy14961 28 APSGSVVASGGLDNKVTVYAIALEDDSSA--KKKTV----ATHTSFISCCIFPNSDQQILTGSGDCTCALWDVESS---- 97 (320)
Q Consensus 28 ~~~~~~l~s~~~dg~i~v~~~~~~~~~~~--~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---- 97 (320)
..++.+++-+..+|.+....+..++.... ....+ ......-.|+.+.. ++.++.|+..|.=.+|.++..
T Consensus 283 ~~~~~~~LL~~~~G~l~~l~l~~d~~~~~~~~V~~l~i~~~~~~~~~ssl~~l~-~g~lFvgS~~Gds~l~~~~~~~~~~ 361 (1158)
T 3ei3_A 283 DPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLD-NGVVFVGSRLGDSQLVKLNVDSNEQ 361 (1158)
T ss_dssp STTSSEEEEEETTCEEEEEEEEEEC-----CEEEEEEEEEEEECSCCSEEEECS-TTEEEEECSSSCEEEEEECSSCCTT
T ss_pred ecCCCEEEEEeCCCCEEEEEEEEcCCccCceeEEEEEEEEcCCccCccEEEEEC-CCEEEEEEecCCcEEEEEecCCCCc
Confidence 34566777777899988776654332110 11111 11222334566654 458999999888888876543
Q ss_pred ----ceeeecccCccceeEEEEeeCC--CCCEEEEEe---CCCeEEEEeCCCCcE-EEEeccCCccccCCCeEEEEECcC
Q psy14961 98 ----QLLQSFHGHTGELMDLDLAPSE--TGNTFVSGS---SDKLVNIWDMRTGYC-VQSFEGHHNLITDDKLVNIWDMRT 167 (320)
Q Consensus 98 ----~~~~~~~~~~~~v~~~~~~~~~--~~~~l~s~~---~dg~i~lwd~~~~~~-~~~~~~~~~~~~~d~~i~iwd~~~ 167 (320)
..+..+. .-++|.++++.... ....+++++ .+|.+++..-.-+.. ...++ -.+.-.+|-++.
T Consensus 362 ~~~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~~-------l~gv~~iWtl~~ 433 (1158)
T 3ei3_A 362 GSYVVAMETFT-NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASID-------LPGIKGLWPLRS 433 (1158)
T ss_dssp SCCEEEEEEEC-CCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEEEEEEEC-------CCSCCEEEEECC
T ss_pred cceEEeEeeec-CcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEEEEEeec-------CCCccEEEEEee
Confidence 2234443 35778777665321 123455443 467777764211111 00110 001122222211
Q ss_pred ----------------CeeeeeecCCCCCeEEE---EEcCCCCEEEEe----------eCCCeEEEEECCCCeeEeEEec
Q psy14961 168 ----------------GYCVQSFEGHQSDVNSV---KFHPSGDAVATG----------SDDATCRLFDLRADKEVACYKK 218 (320)
Q Consensus 168 ----------------~~~~~~~~~~~~~v~~v---~~~p~g~~l~s~----------s~dg~i~iwd~~~~~~~~~~~~ 218 (320)
...+..+.+ ..+..+ .|..+...|+++ ... .|++.+......+..+..
T Consensus 434 ~~~~~~~~yLvlS~~~~T~Vl~i~~--e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~-~Irli~~~~~~~~~~w~~ 510 (1158)
T 3ei3_A 434 DPNRETDDTLVLSFVGQTRVLMLNG--EEVEETELMGFVDDQQTFFCGNVAHQQLIQITSA-SVRLVSQEPKALVSEWKE 510 (1158)
T ss_dssp CSSCSSCCEEEEEETTEEEEEEEET--TEEEEECCTTCCSSSCEEEEEEETTTEEEEEESS-CEEEEESSSCCEEEEECC
T ss_pred cCCCCCCCEEEEECCCCeEEEEEeC--CcccccccccccCCCCcEEEEEcCCCeEEEEecC-EEEEEECCCCeEEEEEEC
Confidence 111111111 011111 112233344433 322 355666544434433332
Q ss_pred CcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEE-EeecCCCceeEEEECcC------CCeEEEecC-CCceEe
Q psy14961 219 DSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVN-HLMGHENRVSCLQVSPD------GTAFSSGSW-DTTLRD 290 (320)
Q Consensus 219 ~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~-~~~~h~~~i~~i~~s~~------~~~l~s~s~-D~~ir~ 290 (320)
... ..+..++. ++.+++.+. ++.+..+++..+.... .-..-...|.|+++.|. ++++|.|.+ |+++|+
T Consensus 511 p~~-~~I~~As~--n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I 586 (1158)
T 3ei3_A 511 PQA-KNISVASC--NSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARI 586 (1158)
T ss_dssp TTC-CCCCEEEE--CSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEE
T ss_pred CCC-CEEEEEEe--CCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEE
Confidence 211 11233332 345666665 6778777655432211 11223568999999863 468999997 999999
Q ss_pred eecc
Q psy14961 291 EESK 294 (320)
Q Consensus 291 ~~~~ 294 (320)
....
T Consensus 587 ~sL~ 590 (1158)
T 3ei3_A 587 LKLP 590 (1158)
T ss_dssp EETT
T ss_pred EECC
Confidence 9874
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.17 E-value=4.5 Score=33.65 Aligned_cols=88 Identities=9% Similarity=-0.017 Sum_probs=47.6
Q ss_pred EEEcCCCCEEEEeeC-CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC--CeEEEEcCCCCeEEEEe
Q psy14961 184 VKFHPSGDAVATGSD-DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND--YTINVWDSLKCCRVNHL 260 (320)
Q Consensus 184 v~~~p~g~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d--g~v~~wd~~~~~~~~~~ 260 (320)
.+++|+++.|+-.+. ...|..-++..+.....+.. . ....++|++.+|+-.... ..|..-++....+ ..+
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-~-----~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~L 222 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC-N-----CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVL 222 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS-C-----EEEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EEC
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC-C-----ccceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEE
Confidence 345777887765544 56788888877654433321 1 112356888888776533 3454445443322 222
Q ss_pred ecCCCceeEEEECcCCCeEEEe
Q psy14961 261 MGHENRVSCLQVSPDGTAFSSG 282 (320)
Q Consensus 261 ~~h~~~i~~i~~s~~~~~l~s~ 282 (320)
. +..+ ..|+|++++|.-+
T Consensus 223 t--~~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 223 T--EANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp S--CSCE--EEEEEETTEEEEE
T ss_pred e--CCCc--ceEEECCCEEEEE
Confidence 2 1222 3366777766544
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.80 E-value=5.5 Score=33.90 Aligned_cols=74 Identities=9% Similarity=0.016 Sum_probs=41.8
Q ss_pred ceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccc----cccccccCeEEEEecCC---CCEEEEE---eCCCeEE
Q psy14961 21 WVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK----TVATHTSFISCCIFPNS---DQQILTG---SGDCTCA 90 (320)
Q Consensus 21 ~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~---~~~l~s~---~~dg~v~ 90 (320)
.-+.++|.|||.++++--..|.|++++.... ...... ...........++++++ +..|+.. ..++.|.
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g--~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTG--RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTC--CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCC--cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 4478999999998777765898888753211 111111 11122345667888774 3455543 2344555
Q ss_pred EEECCC
Q psy14961 91 LWDVES 96 (320)
Q Consensus 91 iwd~~~ 96 (320)
-|.+..
T Consensus 111 R~~~~~ 116 (347)
T 3das_A 111 RMLYDE 116 (347)
T ss_dssp EEEBCT
T ss_pred EEEeCC
Confidence 555543
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.64 E-value=2.5 Score=35.83 Aligned_cols=116 Identities=9% Similarity=0.090 Sum_probs=67.7
Q ss_pred CEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEe-eCCC
Q psy14961 122 NTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATG-SDDA 200 (320)
Q Consensus 122 ~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~-s~dg 200 (320)
..++.++.||.|.-+|..+|+....++... ..+.....+.... .++..++.. ..||
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~----------------~~p~~~~~~~~~~-------~~~~~~vv~p~~dG 67 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN----------------FQPLIEIQEPSRL-------ETYETLIIEPFGDG 67 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG----------------SCCSEECCCSCTT-------TSSEEEEECCSTTT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc----------------cCCcEEecCCccc-------cCCcEEEEEECCCC
Confidence 478999999999999999998766553220 0011111111100 123333333 5799
Q ss_pred eEEEEECCCCeeEeEEecCcceeeeEEEEEe-----------cCCcEEEEEeCCCeEEEEcCCCCeEEEEee
Q psy14961 201 TCRLFDLRADKEVACYKKDSILFGATSVDFS-----------VSGRLLFAGYNDYTINVWDSLKCCRVNHLM 261 (320)
Q Consensus 201 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s-----------~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~ 261 (320)
.+..++..++.....+...... ...-+... ..+..+++|+.+|.+...|+.+++.+-++.
T Consensus 68 ~l~a~~~~~G~~~~~~~~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 68 NIYYFNAHQGLQKLPLSIRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp EEEEEETTTEEEEEEEEHHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred EEEEEECCCCcEEeeeccccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 9999998776543322221111 00001111 145678899999999999999998887664
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.44 E-value=5.9 Score=33.56 Aligned_cols=98 Identities=8% Similarity=0.076 Sum_probs=59.8
Q ss_pred CEEEEEeCCCeEEEEECCCcceeeecccCc-cceeEEEEeeCCCCCEEEEE--eCCCeEEEEeCCCCcEEEEecc-----
Q psy14961 78 QQILTGSGDCTCALWDVESSQLLQSFHGHT-GELMDLDLAPSETGNTFVSG--SSDKLVNIWDMRTGYCVQSFEG----- 149 (320)
Q Consensus 78 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~--~~dg~i~lwd~~~~~~~~~~~~----- 149 (320)
..++.++.||.|.-.|.++|+.+..++... .+.....-...+.+..++.+ +.||.|..+|..+|.....+.-
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 478899999999999999999888776431 22211110011112234443 6899999999887754332210
Q ss_pred -------------------CCc---cccCCCeEEEEECcCCeeeeeec
Q psy14961 150 -------------------HHN---LITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 150 -------------------~~~---~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
... ..+.++.+...|+++|+.+.++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 000 11234567778899998887764
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.09 E-value=6.5 Score=33.39 Aligned_cols=58 Identities=14% Similarity=0.243 Sum_probs=37.7
Q ss_pred eEEEEEec-------CCcEEEEEeCCCeEEEEcCCCCeEEEE--ee-cCCCceeEEEECcCCCeEEEe
Q psy14961 225 ATSVDFSV-------SGRLLFAGYNDYTINVWDSLKCCRVNH--LM-GHENRVSCLQVSPDGTAFSSG 282 (320)
Q Consensus 225 ~~~~~~s~-------~~~~l~~g~~dg~v~~wd~~~~~~~~~--~~-~h~~~i~~i~~s~~~~~l~s~ 282 (320)
+..+.|.. +|.++++....+.|...++........ +. .....+..|++.|||.++++.
T Consensus 273 p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 273 VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 44566653 577777777778887777654433322 22 223478999999999977753
No 339
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.31 E-value=6 Score=35.15 Aligned_cols=106 Identities=10% Similarity=0.052 Sum_probs=57.8
Q ss_pred eEEEEEcCCCC-EEEEeeCCCeEEEEECCCCe---eEeEEecCc-------ceeeeEEEEEecC---CcEEEEEeC---C
Q psy14961 181 VNSVKFHPSGD-AVATGSDDATCRLFDLRADK---EVACYKKDS-------ILFGATSVDFSVS---GRLLFAGYN---D 243 (320)
Q Consensus 181 v~~v~~~p~g~-~l~s~s~dg~i~iwd~~~~~---~~~~~~~~~-------~~~~~~~~~~s~~---~~~l~~g~~---d 243 (320)
-..|+|.|+|. .|+.+...|.|++++..... .+....... ...+...++|+|+ ..+|++... +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 46899999996 45556788999999754321 111111000 0124567899996 233333321 1
Q ss_pred ----------CeEEEEcCC----------CCeEEEEee--cCCCceeEEEECcCCCeEEEecCCC
Q psy14961 244 ----------YTINVWDSL----------KCCRVNHLM--GHENRVSCLQVSPDGTAFSSGSWDT 286 (320)
Q Consensus 244 ----------g~v~~wd~~----------~~~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~D~ 286 (320)
..|.-|... +.+.+..+. ........|+|.|||+++++.+..+
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 133334332 112333332 1122468999999999888776543
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.75 E-value=7.7 Score=39.62 Aligned_cols=200 Identities=17% Similarity=0.175 Sum_probs=102.7
Q ss_pred EeecccceeEEEEEeCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccccccccc----cCeEEEEecCCCC
Q psy14961 3 IWDGLTQTKEHSVTMPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKKTVATHT----SFISCCIFPNSDQ 78 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~ 78 (320)
|.|+++..++.++.+++ .|.=..|-.+.. |+-.+ +..|..|++.... .+...+..|. ..|..-..+++.+
T Consensus 90 iFnl~~k~klks~~~~e-~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s---~P~k~fdR~~~L~~~QIinY~~d~~~k 163 (1630)
T 1xi4_A 90 IFNIEMKSKMKAHTMTD-DVTFWKWISLNT-VALVT-DNAVYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQK 163 (1630)
T ss_pred EeehHHhhhhcccccCC-CceEEEecCCCe-eEEEc-CCeEEEeccCCCC---ccHHHHhcchhcccCeeEEeeeCCCCC
Confidence 56677666666666654 344445544443 33333 3579999985321 2222233332 2233333456666
Q ss_pred EEEEEe-------CCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeC----CCeEEEEeCCCC---cE-
Q psy14961 79 QILTGS-------GDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSS----DKLVNIWDMRTG---YC- 143 (320)
Q Consensus 79 ~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~----dg~i~lwd~~~~---~~- 143 (320)
+++..| -.|.+.+|..+.+ ..+.+.+|-+.-..+.+...+....+++-.. .+.+++-++... ..
T Consensus 164 W~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~ 242 (1630)
T 1xi4_A 164 WLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQP 242 (1630)
T ss_pred eEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCC
Confidence 655322 3588999988754 3355666655444333322222223333222 257888877332 10
Q ss_pred -----EEE-ecc--------------CC---ccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCC
Q psy14961 144 -----VQS-FEG--------------HH---NLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDA 200 (320)
Q Consensus 144 -----~~~-~~~--------------~~---~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg 200 (320)
+.. +.+ .. ..++.-|.+.++|+.++.++..-+--...|...+-++...-++...+.|
T Consensus 243 f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G 322 (1630)
T 1xi4_A 243 FPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKG 322 (1630)
T ss_pred CccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCc
Confidence 000 000 00 1235678899999999988765443344555444444434455555666
Q ss_pred eEEEEECCC
Q psy14961 201 TCRLFDLRA 209 (320)
Q Consensus 201 ~i~iwd~~~ 209 (320)
.|.-..++.
T Consensus 323 ~vl~v~v~~ 331 (1630)
T 1xi4_A 323 QVLSVCVEE 331 (1630)
T ss_pred eEEEEEEcc
Confidence 665555543
No 341
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.78 E-value=8.9 Score=30.38 Aligned_cols=112 Identities=13% Similarity=-0.004 Sum_probs=56.9
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCcccee------EEEEeeCCCCCEEEEEeCCCeEEEEeCCC
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELM------DLDLAPSETGNTFVSGSSDKLVNIWDMRT 140 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~------~~~~~~~~~~~~l~s~~~dg~i~lwd~~~ 140 (320)
.+..+.|.|++. |++. .+|.+.-.+..+..... +.+....|- -.++..+++|.+.++ .||.|.-++-.+
T Consensus 42 ~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCcc-EEEE-eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 567899999776 4444 67776666654422111 111011110 012344677876666 568887776432
Q ss_pred CcEEEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEE
Q psy14961 141 GYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLF 205 (320)
Q Consensus 141 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iw 205 (320)
.. ....+.. +..+. ..-=..+..|.+.|+|.+.+.. |+.+.-.
T Consensus 117 ~~-------~~~Wl~~-----------a~~vg--~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 117 SD-------TDNWIAR-----------ATEVG--SGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp ST-------TCCHHHH-----------SEEEE--CSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred CC-------CCceecc-----------ccEec--cCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 11 0011000 01110 0011357899999999866655 7775433
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.44 E-value=4.3 Score=34.26 Aligned_cols=11 Identities=0% Similarity=-0.018 Sum_probs=6.3
Q ss_pred eEEEEECCCcc
Q psy14961 88 TCALWDVESSQ 98 (320)
Q Consensus 88 ~v~iwd~~~~~ 98 (320)
.+.+||+++.+
T Consensus 286 ~~~~yd~~~~~ 296 (357)
T 2uvk_A 286 STDIHLWHNGK 296 (357)
T ss_dssp CCEEEECC---
T ss_pred eEEEEecCCCc
Confidence 57788987654
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=86.65 E-value=12 Score=30.79 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=45.6
Q ss_pred CCCEEEEeeC------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeCC-----CeEEEEcCCCCeE-
Q psy14961 189 SGDAVATGSD------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYND-----YTINVWDSLKCCR- 256 (320)
Q Consensus 189 ~g~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~d-----g~v~~wd~~~~~~- 256 (320)
++..++.|+. -..+.++|+.+.+=...-........ .++. ..++++++.|+.+ ..+.+||..+.+-
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 4556666653 23588899877542211111111111 1222 2367777777643 3567788765432
Q ss_pred -EEEeecCCCceeEEEECcCCCeEEEecCCC
Q psy14961 257 -VNHLMGHENRVSCLQVSPDGTAFSSGSWDT 286 (320)
Q Consensus 257 -~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~ 286 (320)
+..+......-.. ...++++++.||.+.
T Consensus 236 ~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 236 VMTEFPQERSSISL--VSLAGSLYAIGGFAM 264 (318)
T ss_dssp ECCCCSSCCBSCEE--EEETTEEEEECCBCC
T ss_pred ECCCCCCcccceEE--EEECCEEEEECCeec
Confidence 2222111111112 224678888888754
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.88 E-value=18 Score=29.68 Aligned_cols=92 Identities=11% Similarity=0.114 Sum_probs=41.8
Q ss_pred EeecccceeEEEEEeC--ccceEEEEEcCCCCEEEEecC----CCe-------EEEEEecccCCcccccccccccccCeE
Q psy14961 3 IWDGLTQTKEHSVTMP--ATWVMACAYAPSGSVVASGGL----DNK-------VTVYAIALEDDSSAKKKTVATHTSFIS 69 (320)
Q Consensus 3 ~W~~~~~~~~~~~~~~--~~~V~~~~~~~~~~~l~s~~~----dg~-------i~v~~~~~~~~~~~~~~~~~~h~~~v~ 69 (320)
.+|..+++-.. ..++ ...........++.+++.||. ++. +.+||.. .........+........
T Consensus 28 ~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 28 AYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV--SSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT--TTEEEECSCBSSCBCSCE
T ss_pred EECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC--CCcEEECCCCCccccccc
Confidence 55666655332 2222 111122334567777777773 121 4555543 223322222222111122
Q ss_pred EEEecCCCCEEEEEeCC-------CeEEEEECCCcce
Q psy14961 70 CCIFPNSDQQILTGSGD-------CTCALWDVESSQL 99 (320)
Q Consensus 70 ~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~ 99 (320)
++.. ++..++.|+.+ ..+.+||+.+.+-
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 139 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW 139 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCE
Confidence 2323 45566677653 3577888877643
No 345
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=79.19 E-value=43 Score=31.52 Aligned_cols=234 Identities=11% Similarity=0.077 Sum_probs=121.4
Q ss_pred eCccceEEEEEcCCCCEEEEecCCCeEEEEEecccCCcccccc-cccccccCeEEEEecCCCCEEEEEeCCCeEEEEECC
Q psy14961 17 MPATWVMACAYAPSGSVVASGGLDNKVTVYAIALEDDSSAKKK-TVATHTSFISCCIFPNSDQQILTGSGDCTCALWDVE 95 (320)
Q Consensus 17 ~~~~~V~~~~~~~~~~~l~s~~~dg~i~v~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 95 (320)
++.+.|.++.-+++|.+-+ |..+| +..||-. ...... ........|.++....+ ..|..|+.+| +..||..
T Consensus 19 l~~n~V~~I~qD~~G~lWi-gT~~G-L~ryDG~----~~~~~~~~~~~~~~~i~~i~~d~~-g~lWigT~~G-l~~yd~~ 90 (758)
T 3ott_A 19 AEASVVSCFLQDSEGLIWI-GSNKG-LFSYDGY----STQQHFTYGENNNTRIYCGVIIDN-TYLYMGTDNG-ILVYNYR 90 (758)
T ss_dssp SSCCCEEEEEECTTSCEEE-EESSC-EEEECSS----CEEECSCTTSTTSSCEEEEEEETT-TEEEEEETTE-EEEEETT
T ss_pred cccceEEEEEECCCCCEEE-EECCC-ccccCCC----ceEEEEccCCCCCceEEEEEEcCC-CcEEEEeCCC-eEEEeCC
Confidence 5567899999999996444 44566 5556521 100000 00112345777665554 4666777655 7889987
Q ss_pred CcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCCcEEEEeccCCccccCCCeEEEEECcCCeeeeeec
Q psy14961 96 SSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTGYCVQSFEGHHNLITDDKLVNIWDMRTGYCVQSFE 175 (320)
Q Consensus 96 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 175 (320)
+.+...........|.++.. .+| .|..++.+ -+..+|..+++.. .+.... . .
T Consensus 91 ~~~f~~~~~~~~~~i~~i~~---~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~--------------------~--~ 142 (758)
T 3ott_A 91 ADRYEQPETDFPTDVRTMAL---QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRR--------------------N--G 142 (758)
T ss_dssp TTEECCCSCCCCSCEEEEEE---ETT-EEEEEETT-EEEEEETTTCCEE-EECHHH--------------------H--C
T ss_pred CCEEECcccCCCceEEEEEe---cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCC--------------------C--C
Confidence 76433211111223444432 233 56666655 4667776554321 110000 0 0
Q ss_pred CCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEecCc----ceeeeEEEEEecCCcEEEEEeCCCeEEEEcC
Q psy14961 176 GHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKKDS----ILFGATSVDFSVSGRLLFAGYNDYTINVWDS 251 (320)
Q Consensus 176 ~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~ 251 (320)
-....|.++...++|...+ ++.+ -+..+|..+++.. .+.... ....+.++...+++..|..|+.. -+..+|.
T Consensus 143 l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl~~~~~ 218 (758)
T 3ott_A 143 LPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YLFQYFP 218 (758)
T ss_dssp CSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EEEEEET
T ss_pred cCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEECC-CCeEEcC
Confidence 0123577888888887655 4444 4777887665432 121110 01124556666666655556643 4777886
Q ss_pred CCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeee
Q psy14961 252 LKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEE 292 (320)
Q Consensus 252 ~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~ 292 (320)
.+........-....|.+|...++|.+.+. +.+| +..++
T Consensus 219 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~G-l~~~~ 257 (758)
T 3ott_A 219 STGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDNG-LYVYH 257 (758)
T ss_dssp TTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETTE-EEEEC
T ss_pred CCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCCc-eeEEe
Confidence 654332111112346889988888877654 4455 33444
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=76.20 E-value=12 Score=34.41 Aligned_cols=58 Identities=21% Similarity=0.272 Sum_probs=39.3
Q ss_pred eEEEEEecCCcEEEEEeCC------------CeEEEEcCCCCeEEEEeecC-CCceeEEEECcCCCeEEEe
Q psy14961 225 ATSVDFSVSGRLLFAGYND------------YTINVWDSLKCCRVNHLMGH-ENRVSCLQVSPDGTAFSSG 282 (320)
Q Consensus 225 ~~~~~~s~~~~~l~~g~~d------------g~v~~wd~~~~~~~~~~~~h-~~~i~~i~~s~~~~~l~s~ 282 (320)
.--+.|+|.|.+++.-..+ ..+.+.+..+++...-+.++ ..+++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3468899999866653321 23455565555555445555 4589999999999988776
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=74.87 E-value=7.6 Score=35.38 Aligned_cols=75 Identities=13% Similarity=0.011 Sum_probs=55.3
Q ss_pred eEEEEEecCCcEEEEEe-CCCeEEEEcCCCC------e-------EEEEeecCCCceeEEEECcCCCeEEEecCCCceEe
Q psy14961 225 ATSVDFSVSGRLLFAGY-NDYTINVWDSLKC------C-------RVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRD 290 (320)
Q Consensus 225 ~~~~~~s~~~~~l~~g~-~dg~v~~wd~~~~------~-------~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~ 290 (320)
...+.++|||+++++++ -+.++.++|..+. . ...+.. -.......+|.++|....|---|..|-.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 34578999999998876 5788999986531 1 122222 2346789999999987788889999999
Q ss_pred eecchHhhhh
Q psy14961 291 EESKNRYVQY 300 (320)
Q Consensus 291 ~~~~~~~~~~ 300 (320)
|+.+...+.|
T Consensus 404 Wni~~a~~~~ 413 (638)
T 3sbq_A 404 WNMEEAVRAY 413 (638)
T ss_dssp EEHHHHHHHH
T ss_pred EeccHHHHHh
Confidence 9997775554
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=73.51 E-value=27 Score=32.72 Aligned_cols=73 Identities=16% Similarity=0.315 Sum_probs=38.9
Q ss_pred EEEEcCCCCEEEEecCCC--eEEEEEecccCCccccccc---ccccccCeEEEEecCC-CCEEEEEeC--C-----CeEE
Q psy14961 24 ACAYAPSGSVVASGGLDN--KVTVYAIALEDDSSAKKKT---VATHTSFISCCIFPNS-DQQILTGSG--D-----CTCA 90 (320)
Q Consensus 24 ~~~~~~~~~~l~s~~~dg--~i~v~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~-~~~l~s~~~--d-----g~v~ 90 (320)
+++...++.+++.||.++ .+.+||... ........ +........++.+... +..++.|+. + ..+.
T Consensus 494 ~~~~~~~~~iyv~GG~~~~~~v~~yd~~t--~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~ 571 (695)
T 2zwa_A 494 SACSLPDGNVLILGGVTEGPAMLLYNVTE--EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAI 571 (695)
T ss_dssp EEEECTTSCEEEECCBCSSCSEEEEETTT--TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEE
T ss_pred eEEEEcCCEEEEECCCCCCCCEEEEECCC--CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEE
Confidence 344434888888888765 577777642 22222221 1111111223444433 556666665 2 4688
Q ss_pred EEECCCcc
Q psy14961 91 LWDVESSQ 98 (320)
Q Consensus 91 iwd~~~~~ 98 (320)
+||+.+..
T Consensus 572 ~yd~~~~~ 579 (695)
T 2zwa_A 572 IFKYDAEN 579 (695)
T ss_dssp EEEECTTC
T ss_pred EEEccCCc
Confidence 89988766
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.36 E-value=61 Score=31.67 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=32.5
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK 217 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~ 217 (320)
.+.+++..++..++++-+.|+++|+|++.+++.+....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56788888888899999999999999999998766543
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=67.10 E-value=29 Score=31.66 Aligned_cols=60 Identities=18% Similarity=0.242 Sum_probs=40.1
Q ss_pred eeEEEEEecCCcEEEEEeC------------CCeEEEEcCCCCeEEEEeecC-CCceeEEEECcCCCeEEEec
Q psy14961 224 GATSVDFSVSGRLLFAGYN------------DYTINVWDSLKCCRVNHLMGH-ENRVSCLQVSPDGTAFSSGS 283 (320)
Q Consensus 224 ~~~~~~~s~~~~~l~~g~~------------dg~v~~wd~~~~~~~~~~~~h-~~~i~~i~~s~~~~~l~s~s 283 (320)
+...+.|+++|.+.+.-.. ...|..++..+++...-+.+. ...++.++|+||++.|..+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567899999987773221 125666666555544434433 45799999999999877764
No 351
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.24 E-value=63 Score=27.73 Aligned_cols=188 Identities=9% Similarity=0.085 Sum_probs=100.3
Q ss_pred eEEEEECCCc--ceeeecccC------ccceeEEEEe-eCCC----CCEEEEEe-CCCeEEEEeCCCCcEEEEeccCCcc
Q psy14961 88 TCALWDVESS--QLLQSFHGH------TGELMDLDLA-PSET----GNTFVSGS-SDKLVNIWDMRTGYCVQSFEGHHNL 153 (320)
Q Consensus 88 ~v~iwd~~~~--~~~~~~~~~------~~~v~~~~~~-~~~~----~~~l~s~~-~dg~i~lwd~~~~~~~~~~~~~~~~ 153 (320)
.+.+||+.+. ++++.+.-. .+....+.+. ..++ +.+++.+. ..+-|.++|+.+++.-+....+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~-- 201 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTF-- 201 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGG--
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCC--
Confidence 6778999998 887665422 2345556655 2121 23444443 46789999999998776653221
Q ss_pred ccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCC----CCEEEEeeCCC-eEEEEE---CCCCe---eEeEEecCcce
Q psy14961 154 ITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPS----GDAVATGSDDA-TCRLFD---LRADK---EVACYKKDSIL 222 (320)
Q Consensus 154 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~----g~~l~s~s~dg-~i~iwd---~~~~~---~~~~~~~~~~~ 222 (320)
..+... .+.+ .|.... + ...|..|+++|+ ++.|+-....+ .+.-.. ++... .+...-.....
T Consensus 202 -~pd~~~-~~~i-~G~~~~-~---~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~ 274 (381)
T 3q6k_A 202 -KAERPT-KFDY-GGKEYE-F---KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKY 274 (381)
T ss_dssp -SCCSCE-EEEE-TTEEEE-E---CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTT
T ss_pred -ccccCc-ceEE-CCEEeE-e---ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCC
Confidence 122111 1111 122221 1 246899999998 67776555443 232222 11111 11111111100
Q ss_pred eeeEEEEEe-cCCcEEEEEeCCCeEEEEcCCC-Ce---EEEEe--ecCCCceeEEEECcCCCeEEEecC
Q psy14961 223 FGATSVDFS-VSGRLLFAGYNDYTINVWDSLK-CC---RVNHL--MGHENRVSCLQVSPDGTAFSSGSW 284 (320)
Q Consensus 223 ~~~~~~~~s-~~~~~l~~g~~dg~v~~wd~~~-~~---~~~~~--~~h~~~i~~i~~s~~~~~l~s~s~ 284 (320)
......+++ .+|.+.++--+...|..|+... .. ....+ ...-..+..+++.++|.+.+.++.
T Consensus 275 s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 275 NDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 112345565 5677777777889999999765 21 11111 122236788888888887676643
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=63.24 E-value=80 Score=27.87 Aligned_cols=26 Identities=15% Similarity=0.082 Sum_probs=17.0
Q ss_pred eEEEEeeCCCCC-EEEEEeCCCeEEEEeC
Q psy14961 111 MDLDLAPSETGN-TFVSGSSDKLVNIWDM 138 (320)
Q Consensus 111 ~~~~~~~~~~~~-~l~s~~~dg~i~lwd~ 138 (320)
+.+++ .++|. .++.+...|.|++++.
T Consensus 17 ~~~a~--~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 17 VGALH--SGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp EEEEC--CSSSSCCEEEEETTTEEEEECT
T ss_pred eEEEE--CCCCCeEEEEEeCCceEEEEeC
Confidence 34544 45664 4666678899988864
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.93 E-value=13 Score=36.31 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=30.2
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF 103 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 103 (320)
.+.++...++..++++-+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3455666677789999999999999999999887654
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=55.55 E-value=81 Score=25.51 Aligned_cols=207 Identities=10% Similarity=-0.037 Sum_probs=99.0
Q ss_pred CeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecccCccceeEEEEeeCCCCCEEEEEeCCCeEEEEeCCCC-c---
Q psy14961 67 FISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFHGHTGELMDLDLAPSETGNTFVSGSSDKLVNIWDMRTG-Y--- 142 (320)
Q Consensus 67 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~~~dg~i~lwd~~~~-~--- 142 (320)
.|..+..... ..+.-. ||.|..|-.+....+..-......|..++. .. ...++. . ||.+..|-.+.. +
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~--G~-~hs~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAA--GN-YHSLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEE--CS-SEEEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEe--CC-CEEEEE-E-CCEEEEeeCCCCCCCCC
Confidence 4555555432 333335 899999976542211100011234555543 22 234444 4 899999975431 1
Q ss_pred -------E--EEEeccCCccccCCCeEEEEECcCCeeeeeecCCCCCeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeE
Q psy14961 143 -------C--VQSFEGHHNLITDDKLVNIWDMRTGYCVQSFEGHQSDVNSVKFHPSGDAVATGSDDATCRLFDLRADKEV 213 (320)
Q Consensus 143 -------~--~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~ 213 (320)
. +..-..|...++ ++.+..|-....-.+..-......|..++...+ ..+.-. ||.+..|-......+
T Consensus 97 P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gql 172 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQT 172 (282)
T ss_dssp CGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTT
T ss_pred CcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCC
Confidence 1 111233444567 999999965432111111112345777766543 233334 799999975542222
Q ss_pred eEEecCcceeeeEEEEEecCCcEEEEEeCCCeEEEEcCCCCeEEEEeecCCCceeEEEECcCCCeEEEecCCCceEeeec
Q psy14961 214 ACYKKDSILFGATSVDFSVSGRLLFAGYNDYTINVWDSLKCCRVNHLMGHENRVSCLQVSPDGTAFSSGSWDTTLRDEES 293 (320)
Q Consensus 214 ~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~v~~wd~~~~~~~~~~~~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~~~ 293 (320)
.. +. .....+..++-.. ...++. .+|.|..|-....-.+.....-...|..|+...+-...++ |+.+..|=.
T Consensus 173 g~-p~-~~~~~v~~i~~G~-~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG~ 244 (282)
T 3qhy_B 173 TV-PA-EAQSGVDDVAGGI-FHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAWGS 244 (282)
T ss_dssp SC-CG-GGGSSEEEEEECS-SEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEEST
T ss_pred CC-ce-ecCCCeEEEEecC-CEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEecC
Confidence 11 00 0011233333322 233444 4888888864332111111111235777776655433333 788887764
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=54.80 E-value=19 Score=33.80 Aligned_cols=37 Identities=30% Similarity=0.720 Sum_probs=29.4
Q ss_pred cCeEEEEecCCCCEEEEEeCCCeEEEEECCCcceeeecc
Q psy14961 66 SFISCCIFPNSDQQILTGSGDCTCALWDVESSQLLQSFH 104 (320)
Q Consensus 66 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 104 (320)
..|.|+.+. ..++++-+.|+++|+|++.+++++....
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 346666553 5799999999999999999998876544
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.77 E-value=14 Score=37.02 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=31.3
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEe
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYK 217 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~ 217 (320)
.+.+++..++..++++-+.|+++|+|++.+++.+....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44566777888899999999999999999998766543
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=52.36 E-value=31 Score=32.47 Aligned_cols=37 Identities=14% Similarity=0.228 Sum_probs=28.9
Q ss_pred CeEEEEEcCCCCEEEEeeCCCeEEEEECCCCeeEeEEec
Q psy14961 180 DVNSVKFHPSGDAVATGSDDATCRLFDLRADKEVACYKK 218 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 218 (320)
.|.++.+. ..++++-+.|.++|+|++.+++.+.....
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35555554 67999999999999999999987765544
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.05 E-value=15 Score=36.68 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=27.6
Q ss_pred EEEecCCCCEEEEEeCCCeEEEEECCCcceeeec
Q psy14961 70 CCIFPNSDQQILTGSGDCTCALWDVESSQLLQSF 103 (320)
Q Consensus 70 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 103 (320)
++...++..++++-+.|+++|+|++.+++++...
T Consensus 242 s~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 242 SMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred EeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3444556778999999999999999999887654
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=37.95 E-value=2e+02 Score=26.24 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=38.2
Q ss_pred CeEEEEEcCCCCEEEEeeC------------CCeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEe
Q psy14961 180 DVNSVKFHPSGDAVATGSD------------DATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGY 241 (320)
Q Consensus 180 ~v~~v~~~p~g~~l~s~s~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~ 241 (320)
....|.|+++|.+.++-.. ...+..++..+++...... ......++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEEE
Confidence 4578999999987663211 1245566665565433332 22223467899999999887764
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.02 E-value=1.9e+02 Score=26.51 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=35.9
Q ss_pred eEEEEEcCCCCEEEEeeCC------------CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEE
Q psy14961 181 VNSVKFHPSGDAVATGSDD------------ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAG 240 (320)
Q Consensus 181 v~~v~~~p~g~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g 240 (320)
...|+|+|.|+.++.--.+ ..+...+..+++...... ......++.+.|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCCEEEEE
Confidence 4679999999866543221 234445555555433222 2233456778899999988765
No 361
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=33.77 E-value=1.9e+02 Score=23.54 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=33.5
Q ss_pred EEcCCCCEEEEeeCC--CeEEEEECCCCeeEeEEecCcceeeeEEEEEecCCcEEEEEeC--CCeEEEEcCC
Q psy14961 185 KFHPSGDAVATGSDD--ATCRLFDLRADKEVACYKKDSILFGATSVDFSVSGRLLFAGYN--DYTINVWDSL 252 (320)
Q Consensus 185 ~~~p~g~~l~s~s~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~--dg~v~~wd~~ 252 (320)
.++|++.+|+-...+ ..|..-+++..... .+.... ...|+|++.+|+.+.. .+.|..-++.
T Consensus 190 ~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~-~Lt~~~------~~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 190 PVVLDDTNVYYMDVNRDNAIVHVNINNPNPV-VLTEAN------IEHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEEEETTEEEEEEGGGTTEEEEECSSSCCCE-ECSCSC------EEEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred eeeecCCEEEEEEcCCCcEEEEEECCCCCeE-EEeCCC------cceEEECCCEEEEEECCCCcEEEEEECC
Confidence 356888887654432 35666676654432 222211 1237888988876643 3455555544
No 362
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.77 E-value=1.6e+02 Score=26.16 Aligned_cols=56 Identities=16% Similarity=0.147 Sum_probs=37.3
Q ss_pred EEEEEeCCCeEEEEcCC-CC-------eEEEEee--cCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961 236 LLFAGYNDYTINVWDSL-KC-------CRVNHLM--GHENRVSCLQVSPDGTAFSSGSWDTTLRDE 291 (320)
Q Consensus 236 ~l~~g~~dg~v~~wd~~-~~-------~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~ 291 (320)
.+..|+.+|.|.=.-.. .. ..+.++. ....+|..|.++++..+|..++.++.+|+-
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~vp 488 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLP 488 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEEE
Confidence 57778999976533221 11 1111222 345789999999999999999999888763
No 363
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=21.50 E-value=2.2e+02 Score=26.01 Aligned_cols=57 Identities=7% Similarity=0.041 Sum_probs=38.2
Q ss_pred cEEEEEeCCCeEEEE-cCCCC-----eEEEEee--cCCCceeEEEECcCCCeEEEecCCCceEee
Q psy14961 235 RLLFAGYNDYTINVW-DSLKC-----CRVNHLM--GHENRVSCLQVSPDGTAFSSGSWDTTLRDE 291 (320)
Q Consensus 235 ~~l~~g~~dg~v~~w-d~~~~-----~~~~~~~--~h~~~i~~i~~s~~~~~l~s~s~D~~ir~~ 291 (320)
..+..|+.+|.|.-. ..... ..+.++. ....+|..|.++++...|..++.++.+|+.
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 467789999987633 22111 1122221 345689999999998899989888887765
No 364
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.76 E-value=3.1e+02 Score=24.71 Aligned_cols=58 Identities=9% Similarity=-0.024 Sum_probs=38.4
Q ss_pred CcEEEEEeCCCeEEEEcCCC---C-eEEEEe--ecCCCcee-EEEECcCCCeEEEecCCCceEee
Q psy14961 234 GRLLFAGYNDYTINVWDSLK---C-CRVNHL--MGHENRVS-CLQVSPDGTAFSSGSWDTTLRDE 291 (320)
Q Consensus 234 ~~~l~~g~~dg~v~~wd~~~---~-~~~~~~--~~h~~~i~-~i~~s~~~~~l~s~s~D~~ir~~ 291 (320)
-..+..|+.+|.|.-.-+.. . ..+.++ .....+|. .|.+++++..|..++.++.+|+-
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kvp 477 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVP 477 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccceee
Confidence 34677899999775432211 1 122222 23356885 99999999999999998888864
Done!