Query psy14962
Match_columns 216
No_of_seqs 171 out of 2432
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 17:01:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i1n_A Protein-L-isoaspartate 99.8 3.1E-20 1.1E-24 142.4 15.3 156 3-160 64-219 (226)
2 1r18_A Protein-L-isoaspartate( 99.8 1.2E-19 4.2E-24 139.3 15.0 153 2-156 70-227 (227)
3 3lbf_A Protein-L-isoaspartate 99.8 6.1E-19 2.1E-23 133.6 15.8 142 3-159 66-207 (210)
4 2pbf_A Protein-L-isoaspartate 99.8 4.6E-19 1.6E-23 135.9 14.9 152 3-158 67-226 (227)
5 2yxe_A Protein-L-isoaspartate 99.8 2.8E-18 9.4E-23 130.4 17.0 143 4-158 67-209 (215)
6 1jg1_A PIMT;, protein-L-isoasp 99.8 2.9E-18 9.8E-23 132.3 16.2 145 3-159 80-224 (235)
7 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.1E-18 7.3E-23 135.1 13.2 111 8-124 62-181 (261)
8 1dl5_A Protein-L-isoaspartate 99.8 2.9E-17 1E-21 132.1 16.3 147 3-159 64-211 (317)
9 3g5l_A Putative S-adenosylmeth 99.8 1.6E-18 5.4E-23 135.0 7.8 163 15-204 43-214 (253)
10 1vbf_A 231AA long hypothetical 99.7 1.9E-16 6.6E-21 121.5 16.0 138 3-156 59-196 (231)
11 3l8d_A Methyltransferase; stru 99.7 1.3E-17 4.5E-22 128.7 8.7 109 6-125 43-157 (242)
12 1nkv_A Hypothetical protein YJ 99.7 1.3E-16 4.3E-21 124.3 13.8 110 4-122 26-141 (256)
13 4df3_A Fibrillarin-like rRNA/T 99.7 6E-17 2.1E-21 124.0 11.6 112 3-121 63-182 (233)
14 4hg2_A Methyltransferase type 99.7 1.7E-17 6E-22 129.5 8.7 105 6-124 29-138 (257)
15 3e05_A Precorrin-6Y C5,15-meth 99.7 3.8E-16 1.3E-20 117.7 15.6 112 5-124 31-145 (204)
16 4htf_A S-adenosylmethionine-de 99.7 7.2E-18 2.5E-22 133.5 6.2 103 15-124 67-176 (285)
17 3pfg_A N-methyltransferase; N, 99.7 9E-17 3.1E-21 125.7 12.3 104 5-122 39-152 (263)
18 3ou2_A SAM-dependent methyltra 99.7 5.2E-17 1.8E-21 123.3 10.6 108 4-125 35-150 (218)
19 3njr_A Precorrin-6Y methylase; 99.7 4.8E-16 1.6E-20 117.4 15.4 112 5-125 46-158 (204)
20 3dh0_A SAM dependent methyltra 99.7 2.4E-16 8.2E-21 119.9 13.9 115 4-125 27-147 (219)
21 3bkw_A MLL3908 protein, S-aden 99.7 1.7E-17 5.7E-22 128.1 7.0 165 14-204 41-212 (243)
22 3mti_A RRNA methylase; SAM-dep 99.7 1.4E-16 5E-21 118.1 11.5 112 5-124 11-138 (185)
23 3kkz_A Uncharacterized protein 99.7 2.2E-16 7.4E-21 123.9 13.1 105 13-123 43-152 (267)
24 3eey_A Putative rRNA methylase 99.7 1.1E-16 3.7E-21 120.0 10.8 107 13-123 19-141 (197)
25 3sm3_A SAM-dependent methyltra 99.7 2.5E-17 8.5E-22 126.4 7.4 109 13-124 27-144 (235)
26 1pjz_A Thiopurine S-methyltran 99.7 9.4E-17 3.2E-21 121.2 10.3 105 14-121 20-140 (203)
27 3f4k_A Putative methyltransfer 99.7 3.3E-16 1.1E-20 121.9 13.6 105 13-123 43-152 (257)
28 1vl5_A Unknown conserved prote 99.7 3.3E-16 1.1E-20 122.3 13.4 109 4-122 27-141 (260)
29 3fpf_A Mtnas, putative unchara 99.7 6.5E-16 2.2E-20 121.9 14.7 102 13-123 119-224 (298)
30 3hm2_A Precorrin-6Y C5,15-meth 99.7 6.9E-16 2.4E-20 113.5 13.8 112 5-124 16-130 (178)
31 3hem_A Cyclopropane-fatty-acyl 99.7 6.9E-16 2.4E-20 123.2 14.8 102 14-124 70-186 (302)
32 3bus_A REBM, methyltransferase 99.7 7.8E-16 2.7E-20 120.9 14.5 103 14-122 59-167 (273)
33 2o57_A Putative sarcosine dime 99.7 9.4E-16 3.2E-20 122.0 14.7 114 4-123 68-189 (297)
34 3d2l_A SAM-dependent methyltra 99.7 3E-16 1E-20 121.1 10.9 108 6-124 23-140 (243)
35 1nt2_A Fibrillarin-like PRE-rR 99.7 8.2E-16 2.8E-20 116.6 13.0 100 14-121 55-161 (210)
36 3id6_C Fibrillarin-like rRNA/T 99.7 1.3E-15 4.4E-20 116.8 13.8 113 5-124 64-184 (232)
37 3dlc_A Putative S-adenosyl-L-m 99.7 1E-15 3.6E-20 116.0 13.2 101 15-122 43-149 (219)
38 3vc1_A Geranyl diphosphate 2-C 99.7 1E-15 3.4E-20 122.8 13.6 105 14-124 115-224 (312)
39 1yzh_A TRNA (guanine-N(7)-)-me 99.7 2.6E-15 8.7E-20 114.1 15.0 104 15-124 40-159 (214)
40 1xxl_A YCGJ protein; structura 99.7 1.3E-15 4.5E-20 117.5 13.5 109 5-123 12-126 (239)
41 3h2b_A SAM-dependent methyltra 99.7 3.2E-16 1.1E-20 117.9 9.3 96 17-125 42-145 (203)
42 3mb5_A SAM-dependent methyltra 99.7 2.4E-15 8.2E-20 117.1 14.3 106 14-124 91-197 (255)
43 3e8s_A Putative SAM dependent 99.7 2.9E-16 1E-20 119.7 8.8 155 6-204 44-207 (227)
44 3g2m_A PCZA361.24; SAM-depende 99.7 4.8E-16 1.7E-20 123.9 10.3 104 16-125 82-194 (299)
45 1ve3_A Hypothetical protein PH 99.7 2.2E-15 7.6E-20 115.0 13.5 111 5-124 27-145 (227)
46 3jwh_A HEN1; methyltransferase 99.7 2.6E-15 8.9E-20 114.1 13.7 115 5-122 20-142 (217)
47 3ujc_A Phosphoethanolamine N-m 99.6 5.7E-16 1.9E-20 121.0 10.1 101 14-123 53-161 (266)
48 3gu3_A Methyltransferase; alph 99.6 1.2E-15 4.2E-20 120.7 12.1 111 5-123 12-128 (284)
49 1xtp_A LMAJ004091AAA; SGPP, st 99.6 7.2E-16 2.4E-20 119.8 10.1 100 14-122 91-198 (254)
50 2pwy_A TRNA (adenine-N(1)-)-me 99.6 4.2E-15 1.4E-19 115.7 14.5 113 5-124 87-201 (258)
51 3dtn_A Putative methyltransfer 99.6 1.8E-15 6.1E-20 116.2 12.1 102 14-124 42-151 (234)
52 1i9g_A Hypothetical protein RV 99.6 3.7E-15 1.3E-19 117.6 14.1 114 5-124 90-206 (280)
53 3jwg_A HEN1, methyltransferase 99.6 1.8E-15 6E-20 115.2 11.7 115 5-122 20-142 (219)
54 1kpg_A CFA synthase;, cyclopro 99.6 3.3E-15 1.1E-19 118.3 13.6 102 14-124 62-171 (287)
55 3dxy_A TRNA (guanine-N(7)-)-me 99.6 9.5E-16 3.3E-20 116.9 10.1 104 16-125 34-154 (218)
56 3mgg_A Methyltransferase; NYSG 99.6 2.6E-15 9E-20 118.1 13.0 105 14-124 35-145 (276)
57 3p9n_A Possible methyltransfer 99.6 3E-15 1E-19 111.4 12.6 104 15-125 43-157 (189)
58 2p8j_A S-adenosylmethionine-de 99.6 2.7E-15 9.2E-20 113.2 12.4 113 4-125 12-132 (209)
59 2gb4_A Thiopurine S-methyltran 99.6 1.7E-15 5.7E-20 118.0 11.3 104 15-121 67-191 (252)
60 3g5t_A Trans-aconitate 3-methy 99.6 3.5E-15 1.2E-19 118.9 13.2 103 15-121 35-149 (299)
61 2pxx_A Uncharacterized protein 99.6 1.8E-15 6E-20 114.5 10.5 112 5-125 31-163 (215)
62 3evz_A Methyltransferase; NYSG 99.6 4.6E-15 1.6E-19 113.7 12.9 104 13-124 52-182 (230)
63 2fca_A TRNA (guanine-N(7)-)-me 99.6 3.6E-15 1.2E-19 113.3 12.1 104 15-124 37-156 (213)
64 3ofk_A Nodulation protein S; N 99.6 2E-15 6.8E-20 114.6 10.7 100 14-124 49-157 (216)
65 3dr5_A Putative O-methyltransf 99.6 9.4E-16 3.2E-20 117.2 8.9 102 17-121 57-163 (221)
66 2yqz_A Hypothetical protein TT 99.6 3.6E-15 1.2E-19 116.3 12.3 107 5-120 25-140 (263)
67 2p7i_A Hypothetical protein; p 99.6 1.3E-15 4.4E-20 117.7 9.5 108 4-125 31-145 (250)
68 2kw5_A SLR1183 protein; struct 99.6 8.1E-15 2.8E-19 110.1 13.4 103 13-125 27-135 (202)
69 3bxo_A N,N-dimethyltransferase 99.6 5.6E-15 1.9E-19 113.6 12.9 105 6-124 30-144 (239)
70 2b25_A Hypothetical protein; s 99.6 7.7E-15 2.6E-19 118.9 14.2 119 4-124 95-222 (336)
71 3tfw_A Putative O-methyltransf 99.6 4.6E-15 1.6E-19 115.3 12.3 105 14-122 61-171 (248)
72 3dmg_A Probable ribosomal RNA 99.6 5.2E-15 1.8E-19 121.6 13.2 101 15-124 232-343 (381)
73 1dus_A MJ0882; hypothetical pr 99.6 1E-14 3.5E-19 108.4 13.6 111 4-125 42-161 (194)
74 2xvm_A Tellurite resistance pr 99.6 7.9E-15 2.7E-19 109.6 13.1 107 5-122 23-137 (199)
75 1yb2_A Hypothetical protein TA 99.6 5.9E-15 2E-19 116.3 12.9 105 14-124 108-214 (275)
76 3kr9_A SAM-dependent methyltra 99.6 2.3E-15 7.9E-20 114.6 10.0 109 10-123 9-121 (225)
77 3hnr_A Probable methyltransfer 99.6 8.7E-15 3E-19 111.3 13.1 105 5-124 36-148 (220)
78 3g07_A 7SK snRNA methylphospha 99.6 1.2E-15 4.2E-20 121.3 8.7 113 10-123 40-222 (292)
79 3lec_A NADB-rossmann superfami 99.6 2.5E-15 8.4E-20 114.7 9.9 111 9-124 14-128 (230)
80 3ocj_A Putative exported prote 99.6 9.2E-16 3.2E-20 122.7 7.9 110 10-124 112-230 (305)
81 2fk8_A Methoxy mycolic acid sy 99.6 1E-14 3.6E-19 117.1 13.8 103 14-125 88-198 (318)
82 1o54_A SAM-dependent O-methylt 99.6 1E-14 3.6E-19 115.0 13.3 106 14-124 110-216 (277)
83 2p35_A Trans-aconitate 2-methy 99.6 5.9E-15 2E-19 114.9 11.7 99 14-124 31-135 (259)
84 4fsd_A Arsenic methyltransfera 99.6 4.1E-15 1.4E-19 122.6 11.4 107 14-122 81-204 (383)
85 3tma_A Methyltransferase; thum 99.6 1E-14 3.5E-19 119.0 13.6 106 14-124 201-320 (354)
86 2frn_A Hypothetical protein PH 99.6 5.2E-15 1.8E-19 116.9 11.4 105 13-124 122-228 (278)
87 3grz_A L11 mtase, ribosomal pr 99.6 4.8E-15 1.6E-19 111.7 10.6 111 5-124 49-162 (205)
88 3thr_A Glycine N-methyltransfe 99.6 1.5E-16 5.2E-21 126.3 2.2 106 15-124 56-178 (293)
89 1y8c_A S-adenosylmethionine-de 99.6 6.1E-15 2.1E-19 113.7 11.1 110 5-124 26-145 (246)
90 2ift_A Putative methylase HI07 99.6 3.2E-15 1.1E-19 112.6 9.2 105 16-125 53-167 (201)
91 3bkx_A SAM-dependent methyltra 99.6 1.2E-14 4E-19 114.3 12.8 114 5-124 34-162 (275)
92 2a14_A Indolethylamine N-methy 99.6 6.3E-16 2.2E-20 121.1 5.5 106 14-122 53-198 (263)
93 3duw_A OMT, O-methyltransferas 99.6 3.9E-15 1.3E-19 113.6 9.7 104 14-121 56-167 (223)
94 3gnl_A Uncharacterized protein 99.6 4E-15 1.4E-19 114.4 9.7 112 8-124 13-128 (244)
95 2esr_A Methyltransferase; stru 99.6 4.9E-15 1.7E-19 109.0 9.9 117 3-126 19-143 (177)
96 2ipx_A RRNA 2'-O-methyltransfe 99.6 1.2E-14 4.2E-19 111.7 12.5 102 14-122 75-183 (233)
97 3ntv_A MW1564 protein; rossman 99.6 5.3E-15 1.8E-19 113.8 10.4 102 14-120 69-175 (232)
98 3m33_A Uncharacterized protein 99.6 6.4E-15 2.2E-19 112.8 10.8 92 14-118 46-139 (226)
99 1ixk_A Methyltransferase; open 99.6 8.4E-15 2.9E-19 117.7 11.6 106 14-124 116-249 (315)
100 2yvl_A TRMI protein, hypotheti 99.6 6.4E-14 2.2E-18 108.4 16.2 104 14-124 89-193 (248)
101 3ccf_A Cyclopropane-fatty-acyl 99.6 1E-14 3.5E-19 115.0 11.9 105 5-125 48-158 (279)
102 3m70_A Tellurite resistance pr 99.6 1.2E-14 4.2E-19 114.9 12.3 107 5-123 111-225 (286)
103 2fhp_A Methylase, putative; al 99.6 5.1E-15 1.7E-19 109.7 9.3 116 4-126 33-159 (187)
104 3iv6_A Putative Zn-dependent a 99.6 1.1E-14 3.8E-19 113.5 11.6 107 4-124 35-151 (261)
105 3ckk_A TRNA (guanine-N(7)-)-me 99.6 7.6E-15 2.6E-19 113.1 10.6 110 14-124 44-171 (235)
106 4dcm_A Ribosomal RNA large sub 99.6 1.8E-14 6.3E-19 118.2 13.4 113 6-124 214-337 (375)
107 1zx0_A Guanidinoacetate N-meth 99.6 2E-15 7E-20 116.3 7.2 100 14-121 58-170 (236)
108 3orh_A Guanidinoacetate N-meth 99.6 2.3E-15 7.8E-20 116.2 7.4 98 15-120 59-169 (236)
109 3e23_A Uncharacterized protein 99.6 6.9E-15 2.4E-19 111.2 10.0 98 12-124 39-144 (211)
110 3u81_A Catechol O-methyltransf 99.6 5.8E-15 2E-19 112.7 9.4 105 15-124 57-173 (221)
111 2vdw_A Vaccinia virus capping 99.6 8.6E-15 3E-19 116.9 10.7 108 16-125 48-173 (302)
112 1ri5_A MRNA capping enzyme; me 99.6 1.5E-14 5.2E-19 114.7 12.0 106 13-124 61-177 (298)
113 3lpm_A Putative methyltransfer 99.6 1.6E-14 5.3E-19 112.9 11.7 105 14-124 46-179 (259)
114 3g89_A Ribosomal RNA small sub 99.6 1.1E-14 3.8E-19 113.1 10.8 103 15-123 79-186 (249)
115 3lcc_A Putative methyl chlorid 99.6 8.8E-15 3E-19 112.5 10.1 101 16-124 66-174 (235)
116 1p91_A Ribosomal RNA large sub 99.6 2E-14 6.7E-19 112.7 12.2 99 15-125 84-182 (269)
117 3dli_A Methyltransferase; PSI- 99.6 8.7E-15 3E-19 112.9 9.9 97 13-125 38-144 (240)
118 3tr6_A O-methyltransferase; ce 99.6 3.1E-15 1.1E-19 114.3 7.2 104 14-121 62-174 (225)
119 1ws6_A Methyltransferase; stru 99.6 8.4E-15 2.9E-19 106.9 9.3 114 4-126 29-152 (171)
120 1xdz_A Methyltransferase GIDB; 99.6 8.1E-15 2.8E-19 113.3 9.6 102 15-122 69-175 (240)
121 2gs9_A Hypothetical protein TT 99.6 2.7E-14 9.1E-19 107.9 12.2 102 9-125 29-136 (211)
122 3ege_A Putative methyltransfer 99.6 8.5E-15 2.9E-19 114.5 9.7 104 4-124 24-133 (261)
123 1nv8_A HEMK protein; class I a 99.6 4.3E-14 1.5E-18 111.9 13.8 101 16-124 123-252 (284)
124 2ex4_A Adrenal gland protein A 99.6 9E-15 3.1E-19 112.9 9.5 102 16-124 79-188 (241)
125 3bgv_A MRNA CAP guanine-N7 met 99.6 3.2E-14 1.1E-18 114.1 13.0 120 3-124 21-158 (313)
126 1wzn_A SAM-dependent methyltra 99.6 4.1E-14 1.4E-18 109.8 13.1 99 15-123 40-147 (252)
127 2fpo_A Methylase YHHF; structu 99.6 1E-14 3.5E-19 109.9 9.4 103 16-125 54-164 (202)
128 1sui_A Caffeoyl-COA O-methyltr 99.6 7.8E-15 2.7E-19 113.9 8.9 103 15-121 78-190 (247)
129 2b3t_A Protein methyltransfera 99.6 4E-14 1.4E-18 111.6 13.0 101 15-122 108-239 (276)
130 1jsx_A Glucose-inhibited divis 99.6 2.6E-14 8.9E-19 107.7 11.5 101 16-123 65-167 (207)
131 3r3h_A O-methyltransferase, SA 99.6 7.7E-16 2.6E-20 119.2 3.0 104 15-122 59-171 (242)
132 1fbn_A MJ fibrillarin homologu 99.6 3E-14 1E-18 109.4 11.8 98 14-120 72-177 (230)
133 3mq2_A 16S rRNA methyltransfer 99.6 3.4E-15 1.2E-19 113.5 6.5 112 6-122 19-141 (218)
134 1g8a_A Fibrillarin-like PRE-rR 99.6 3.1E-14 1.1E-18 108.9 11.9 101 14-121 71-178 (227)
135 1l3i_A Precorrin-6Y methyltran 99.6 2.5E-14 8.7E-19 106.0 11.0 111 5-124 24-137 (192)
136 3ggd_A SAM-dependent methyltra 99.6 1.2E-14 4E-19 112.5 9.2 107 7-124 47-166 (245)
137 2ozv_A Hypothetical protein AT 99.6 3.1E-14 1.1E-18 111.3 11.4 106 14-124 34-173 (260)
138 2vdv_E TRNA (guanine-N(7)-)-me 99.6 5.3E-14 1.8E-18 109.1 12.6 108 15-123 48-175 (246)
139 2g72_A Phenylethanolamine N-me 99.6 6.3E-15 2.1E-19 116.9 7.4 114 5-120 60-214 (289)
140 3uwp_A Histone-lysine N-methyl 99.5 4.1E-14 1.4E-18 115.8 12.1 113 3-121 162-288 (438)
141 3a27_A TYW2, uncharacterized p 99.5 3.5E-14 1.2E-18 111.8 11.3 105 13-124 116-222 (272)
142 4dzr_A Protein-(glutamine-N5) 99.5 1.8E-15 6.3E-20 114.3 3.6 112 3-122 18-166 (215)
143 3i9f_A Putative type 11 methyl 99.5 1.6E-14 5.3E-19 105.6 8.4 95 14-124 15-115 (170)
144 2yxd_A Probable cobalt-precorr 99.5 1E-13 3.5E-18 102.0 12.8 108 4-125 25-135 (183)
145 1u2z_A Histone-lysine N-methyl 99.5 1.1E-13 3.8E-18 114.9 14.4 113 3-121 231-359 (433)
146 3ajd_A Putative methyltransfer 99.5 2E-14 6.9E-19 113.2 9.4 106 14-124 81-214 (274)
147 2avn_A Ubiquinone/menaquinone 99.5 4.9E-14 1.7E-18 110.1 11.0 103 8-124 46-155 (260)
148 3c3y_A Pfomt, O-methyltransfer 99.5 1.9E-14 6.7E-19 111.0 8.5 103 15-121 69-181 (237)
149 3c3p_A Methyltransferase; NP_9 99.5 1.8E-14 6.2E-19 109.0 8.1 102 15-121 55-160 (210)
150 3htx_A HEN1; HEN1, small RNA m 99.5 1.3E-13 4.6E-18 120.8 14.0 118 4-124 711-837 (950)
151 2gpy_A O-methyltransferase; st 99.5 2.7E-14 9.2E-19 109.7 8.6 104 14-122 52-161 (233)
152 3cgg_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 102.2 12.1 98 14-124 44-150 (195)
153 2hnk_A SAM-dependent O-methylt 99.5 1.7E-14 5.7E-19 111.4 7.1 104 14-121 58-181 (239)
154 1vlm_A SAM-dependent methyltra 99.5 1.7E-14 5.8E-19 109.8 7.0 91 16-125 47-143 (219)
155 3adn_A Spermidine synthase; am 99.5 6.7E-14 2.3E-18 111.2 10.6 109 15-124 82-201 (294)
156 2frx_A Hypothetical protein YE 99.5 7.2E-14 2.5E-18 117.9 11.3 104 16-124 117-249 (479)
157 1o9g_A RRNA methyltransferase; 99.5 9.2E-14 3.2E-18 107.9 10.9 103 16-122 51-215 (250)
158 3gdh_A Trimethylguanosine synt 99.5 3.7E-15 1.3E-19 115.0 2.8 99 15-121 77-181 (241)
159 3fzg_A 16S rRNA methylase; met 99.5 3.9E-14 1.3E-18 104.3 7.9 99 13-119 46-150 (200)
160 2nxc_A L11 mtase, ribosomal pr 99.5 3.2E-14 1.1E-18 110.9 7.9 106 6-121 110-218 (254)
161 3p2e_A 16S rRNA methylase; met 99.5 3.6E-14 1.2E-18 108.7 8.0 102 14-121 22-139 (225)
162 2avd_A Catechol-O-methyltransf 99.5 2.9E-14 9.8E-19 109.1 7.3 104 14-121 67-179 (229)
163 3cbg_A O-methyltransferase; cy 99.5 2.4E-14 8.2E-19 110.1 6.6 104 15-122 71-183 (232)
164 2i62_A Nicotinamide N-methyltr 99.5 4.8E-14 1.6E-18 110.0 8.4 107 14-122 54-199 (265)
165 2pjd_A Ribosomal RNA small sub 99.5 1E-13 3.5E-18 112.6 10.6 101 15-124 195-306 (343)
166 3m6w_A RRNA methylase; rRNA me 99.5 4.7E-14 1.6E-18 118.2 8.7 105 14-124 99-232 (464)
167 2aot_A HMT, histamine N-methyl 99.5 4.9E-14 1.7E-18 112.0 8.3 106 15-124 51-175 (292)
168 2bm8_A Cephalosporin hydroxyla 99.5 3.7E-14 1.3E-18 109.4 7.3 97 15-121 80-187 (236)
169 2yxl_A PH0851 protein, 450AA l 99.5 3.5E-13 1.2E-17 113.2 13.5 107 14-125 257-393 (450)
170 2fyt_A Protein arginine N-meth 99.5 1.6E-13 5.5E-18 111.3 10.9 98 14-118 62-168 (340)
171 3q7e_A Protein arginine N-meth 99.5 2.4E-13 8.1E-18 110.7 11.8 99 14-119 64-171 (349)
172 2igt_A SAM dependent methyltra 99.5 1.2E-13 4.1E-18 111.6 9.5 104 15-124 152-275 (332)
173 2qe6_A Uncharacterized protein 99.5 8.5E-13 2.9E-17 103.9 14.1 101 16-124 77-199 (274)
174 3k6r_A Putative transferase PH 99.5 3.4E-13 1.2E-17 105.9 11.5 102 13-121 122-225 (278)
175 3q87_B N6 adenine specific DNA 99.5 2.4E-13 8.3E-18 99.5 10.0 91 15-125 22-127 (170)
176 3gwz_A MMCR; methyltransferase 99.5 1.3E-12 4.6E-17 107.0 15.5 102 14-123 200-309 (369)
177 2y1w_A Histone-arginine methyl 99.5 3.8E-13 1.3E-17 109.4 11.7 100 14-121 48-155 (348)
178 3m4x_A NOL1/NOP2/SUN family pr 99.5 1.5E-13 5E-18 115.0 9.4 106 14-124 103-237 (456)
179 4dmg_A Putative uncharacterize 99.5 2.2E-13 7.5E-18 112.3 9.9 104 13-125 211-330 (393)
180 2r3s_A Uncharacterized protein 99.5 9E-13 3.1E-17 106.4 13.2 103 15-124 164-274 (335)
181 2plw_A Ribosomal RNA methyltra 99.5 3.5E-13 1.2E-17 101.0 10.0 95 14-124 20-157 (201)
182 1ej0_A FTSJ; methyltransferase 99.5 1.9E-13 6.4E-18 99.9 8.1 97 13-125 19-140 (180)
183 1qzz_A RDMB, aclacinomycin-10- 99.5 1.2E-12 4.2E-17 107.3 13.8 101 14-122 180-288 (374)
184 3r0q_C Probable protein argini 99.5 2.8E-13 9.7E-18 111.3 10.0 100 14-121 61-169 (376)
185 3dp7_A SAM-dependent methyltra 99.5 9.6E-13 3.3E-17 107.6 13.0 102 15-123 178-289 (363)
186 1x19_A CRTF-related protein; m 99.5 2.7E-12 9.1E-17 104.8 15.6 103 14-124 188-298 (359)
187 1g6q_1 HnRNP arginine N-methyl 99.4 7.4E-13 2.5E-17 106.9 11.9 99 14-119 36-143 (328)
188 3i53_A O-methyltransferase; CO 99.4 1.5E-12 5.3E-17 105.1 13.4 102 15-124 168-277 (332)
189 2qm3_A Predicted methyltransfe 99.4 3.9E-12 1.3E-16 104.4 15.5 102 15-123 171-280 (373)
190 3cc8_A Putative methyltransfer 99.4 6E-13 2.1E-17 101.4 9.9 96 15-125 31-134 (230)
191 1xj5_A Spermidine synthase 1; 99.4 4.5E-13 1.5E-17 108.2 9.5 106 15-124 119-238 (334)
192 1tw3_A COMT, carminomycin 4-O- 99.4 2.3E-12 8E-17 105.1 13.6 102 14-123 181-290 (360)
193 4hc4_A Protein arginine N-meth 99.4 1.2E-12 4.2E-17 106.9 10.9 97 15-119 82-187 (376)
194 1iy9_A Spermidine synthase; ro 99.4 1.1E-12 3.8E-17 103.3 10.4 108 15-124 74-192 (275)
195 3bzb_A Uncharacterized protein 99.4 3.8E-12 1.3E-16 100.5 13.5 107 15-123 78-207 (281)
196 3mcz_A O-methyltransferase; ad 99.4 1.4E-12 4.9E-17 106.1 11.3 104 14-123 176-289 (352)
197 1inl_A Spermidine synthase; be 99.4 6.8E-13 2.3E-17 105.6 9.1 108 15-124 89-208 (296)
198 2o07_A Spermidine synthase; st 99.4 7.1E-13 2.4E-17 105.8 9.1 106 15-124 94-212 (304)
199 1wxx_A TT1595, hypothetical pr 99.4 5.9E-13 2E-17 109.6 8.6 102 16-125 209-329 (382)
200 1sqg_A SUN protein, FMU protei 99.4 1.7E-12 5.9E-17 108.4 11.5 104 14-124 244-377 (429)
201 3b3j_A Histone-arginine methyl 99.4 1E-12 3.4E-17 111.1 10.1 100 14-121 156-263 (480)
202 2b78_A Hypothetical protein SM 99.4 7.3E-13 2.5E-17 109.1 9.0 105 15-125 211-335 (385)
203 1mjf_A Spermidine synthase; sp 99.4 2.4E-13 8.1E-18 107.5 5.8 106 15-124 74-196 (281)
204 3bwc_A Spermidine synthase; SA 99.4 5.4E-13 1.9E-17 106.6 7.9 108 15-124 94-213 (304)
205 2ip2_A Probable phenazine-spec 99.4 2.4E-12 8.2E-17 104.0 11.8 101 14-123 166-274 (334)
206 1af7_A Chemotaxis receptor met 99.4 2.1E-12 7.2E-17 101.4 11.0 105 16-120 105-251 (274)
207 2h00_A Methyltransferase 10 do 99.4 7.9E-13 2.7E-17 102.8 8.4 81 16-101 65-151 (254)
208 1zq9_A Probable dimethyladenos 99.4 1.8E-12 6.1E-17 102.7 10.5 89 3-102 17-105 (285)
209 3gjy_A Spermidine synthase; AP 99.4 4.3E-13 1.5E-17 107.0 6.5 101 18-124 91-203 (317)
210 2yx1_A Hypothetical protein MJ 99.4 1.8E-12 6.1E-17 105.0 10.0 100 14-124 193-294 (336)
211 4a6d_A Hydroxyindole O-methylt 99.4 1.3E-12 4.4E-17 106.5 9.2 100 14-122 177-284 (353)
212 3gru_A Dimethyladenosine trans 99.4 4.3E-12 1.5E-16 100.6 12.0 91 2-104 38-128 (295)
213 3bt7_A TRNA (uracil-5-)-methyl 99.4 1.3E-12 4.4E-17 107.1 8.9 101 17-125 214-330 (369)
214 2as0_A Hypothetical protein PH 99.4 1.1E-12 3.9E-17 108.4 8.7 105 15-125 216-339 (396)
215 2jjq_A Uncharacterized RNA met 99.4 8.7E-12 3E-16 103.8 13.9 99 14-124 288-390 (425)
216 3tm4_A TRNA (guanine N2-)-meth 99.4 1.7E-12 6E-17 106.5 9.5 104 14-124 215-332 (373)
217 3opn_A Putative hemolysin; str 99.4 1.4E-13 4.7E-18 105.9 2.7 110 5-121 27-137 (232)
218 2b2c_A Spermidine synthase; be 99.4 1E-12 3.5E-17 105.3 7.6 108 15-124 107-225 (314)
219 2b9e_A NOL1/NOP2/SUN domain fa 99.4 1.5E-11 5.1E-16 98.3 14.3 105 14-124 100-237 (309)
220 1uwv_A 23S rRNA (uracil-5-)-me 99.4 8.2E-12 2.8E-16 104.4 13.2 111 3-124 275-392 (433)
221 3c0k_A UPF0064 protein YCCW; P 99.4 1.1E-12 3.9E-17 108.4 7.7 106 15-125 219-343 (396)
222 4e2x_A TCAB9; kijanose, tetron 99.4 9.5E-14 3.2E-18 115.5 1.1 98 14-123 105-210 (416)
223 1uir_A Polyamine aminopropyltr 99.4 1.4E-12 4.8E-17 104.6 7.8 108 15-123 76-197 (314)
224 3hp7_A Hemolysin, putative; st 99.3 5.4E-12 1.9E-16 99.5 10.5 96 16-123 85-187 (291)
225 2f8l_A Hypothetical protein LM 99.3 7.4E-12 2.5E-16 101.7 11.6 103 15-124 129-259 (344)
226 2i7c_A Spermidine synthase; tr 99.3 1.2E-12 4.2E-17 103.5 6.7 108 15-124 77-195 (283)
227 2nyu_A Putative ribosomal RNA 99.3 3.1E-12 1.1E-16 95.3 8.5 96 13-124 19-148 (196)
228 2cmg_A Spermidine synthase; tr 99.3 1.8E-12 6.3E-17 101.3 7.3 103 15-124 71-174 (262)
229 2pt6_A Spermidine synthase; tr 99.3 1.4E-12 4.9E-17 104.8 6.8 108 15-124 115-233 (321)
230 4azs_A Methyltransferase WBDD; 99.3 1E-12 3.5E-17 113.4 6.3 98 14-119 64-171 (569)
231 3sso_A Methyltransferase; macr 99.3 1.8E-12 6.1E-17 105.9 6.7 96 14-123 214-326 (419)
232 3dou_A Ribosomal RNA large sub 99.3 2.7E-12 9.3E-17 95.7 7.3 93 14-125 23-143 (191)
233 3giw_A Protein of unknown func 99.3 1E-11 3.5E-16 96.9 9.9 102 18-124 80-203 (277)
234 3v97_A Ribosomal RNA large sub 99.3 5.1E-12 1.7E-16 111.3 9.2 105 15-124 538-660 (703)
235 3lst_A CALO1 methyltransferase 99.3 9.5E-12 3.2E-16 101.1 9.9 98 14-122 182-287 (348)
236 2h1r_A Dimethyladenosine trans 99.3 1.4E-11 4.9E-16 98.1 10.3 89 3-103 31-119 (299)
237 3p9c_A Caffeic acid O-methyltr 99.3 2.6E-11 8.9E-16 99.2 10.7 93 14-122 199-299 (364)
238 3reo_A (ISO)eugenol O-methyltr 99.3 1.9E-11 6.5E-16 100.1 9.8 94 14-123 201-302 (368)
239 2zfu_A Nucleomethylin, cerebra 99.3 1.2E-11 4.1E-16 93.6 8.0 92 6-124 58-154 (215)
240 1wy7_A Hypothetical protein PH 99.3 1.5E-10 5E-15 87.0 13.5 94 14-120 47-148 (207)
241 3k0b_A Predicted N6-adenine-sp 99.2 9.8E-11 3.4E-15 96.5 13.3 115 4-125 191-354 (393)
242 2okc_A Type I restriction enzy 99.2 2.4E-11 8.1E-16 102.0 9.6 115 3-123 160-309 (445)
243 3ldg_A Putative uncharacterize 99.2 1.6E-10 5.4E-15 94.9 14.3 115 4-125 184-347 (384)
244 3ldu_A Putative methylase; str 99.2 8.4E-11 2.9E-15 96.7 12.6 107 14-125 193-348 (385)
245 3tqs_A Ribosomal RNA small sub 99.2 2.7E-11 9.3E-16 94.2 9.1 88 2-102 17-108 (255)
246 3frh_A 16S rRNA methylase; met 99.2 1.5E-10 5.1E-15 88.3 12.7 94 15-119 104-204 (253)
247 2p41_A Type II methyltransfera 99.2 2.1E-11 7.3E-16 97.3 8.3 99 13-124 79-194 (305)
248 1ne2_A Hypothetical protein TA 99.2 1.4E-10 5E-15 86.6 12.4 90 14-121 49-146 (200)
249 1fp1_D Isoliquiritigenin 2'-O- 99.2 2.9E-11 9.9E-16 99.1 9.0 92 14-121 207-306 (372)
250 2oxt_A Nucleoside-2'-O-methylt 99.2 2.9E-12 9.8E-17 100.3 2.7 103 13-125 71-189 (265)
251 3lcv_B Sisomicin-gentamicin re 99.2 5.6E-11 1.9E-15 91.5 9.7 99 13-119 129-234 (281)
252 3fut_A Dimethyladenosine trans 99.2 3.4E-11 1.2E-15 94.3 8.5 86 3-102 36-122 (271)
253 2wa2_A Non-structural protein 99.2 3E-12 1E-16 100.7 2.2 102 14-125 80-197 (276)
254 2dul_A N(2),N(2)-dimethylguano 99.2 2.6E-11 9E-16 99.4 7.8 100 16-121 47-164 (378)
255 2ih2_A Modification methylase 99.2 5E-11 1.7E-15 99.1 8.2 105 3-124 28-167 (421)
256 1fp2_A Isoflavone O-methyltran 99.2 5.9E-11 2E-15 96.6 8.3 93 14-122 186-289 (352)
257 3cvo_A Methyltransferase-like 99.2 2.7E-10 9.3E-15 85.1 11.2 101 14-120 28-153 (202)
258 3axs_A Probable N(2),N(2)-dime 99.2 4.2E-11 1.4E-15 98.4 7.3 103 15-121 51-158 (392)
259 1qam_A ERMC' methyltransferase 99.2 3.3E-10 1.1E-14 87.6 11.9 76 14-100 28-104 (244)
260 1yub_A Ermam, rRNA methyltrans 99.1 1.7E-12 5.9E-17 100.5 -1.8 111 3-126 18-150 (245)
261 3o4f_A Spermidine synthase; am 99.1 7.6E-10 2.6E-14 87.1 12.8 110 15-125 82-202 (294)
262 2qfm_A Spermine synthase; sper 99.1 4.1E-11 1.4E-15 96.8 5.6 108 16-125 188-318 (364)
263 2xyq_A Putative 2'-O-methyl tr 99.1 1.1E-10 3.6E-15 92.3 7.6 92 13-125 60-175 (290)
264 1m6y_A S-adenosyl-methyltransf 99.1 1.2E-10 4.1E-15 92.6 7.5 91 2-101 14-109 (301)
265 3uzu_A Ribosomal RNA small sub 99.1 4.5E-10 1.5E-14 88.4 9.8 99 3-112 31-136 (279)
266 2ar0_A M.ecoki, type I restric 99.1 3E-10 1E-14 97.3 9.3 114 4-124 159-315 (541)
267 1zg3_A Isoflavanone 4'-O-methy 99.1 2.4E-10 8.3E-15 93.1 8.1 92 15-122 192-294 (358)
268 2ld4_A Anamorsin; methyltransf 99.1 5.6E-11 1.9E-15 87.1 2.9 82 13-120 9-100 (176)
269 3v97_A Ribosomal RNA large sub 99.0 1.6E-09 5.4E-14 95.5 12.3 117 3-125 179-351 (703)
270 3ll7_A Putative methyltransfer 99.0 1.1E-09 3.8E-14 90.2 9.9 79 14-100 91-173 (410)
271 4fzv_A Putative methyltransfer 99.0 1.3E-09 4.3E-14 88.6 9.1 112 13-125 145-288 (359)
272 3ftd_A Dimethyladenosine trans 99.0 9.9E-10 3.4E-14 85.1 8.1 95 3-111 20-116 (249)
273 3lkd_A Type I restriction-modi 99.0 1.1E-08 3.7E-13 87.5 13.7 119 3-124 206-361 (542)
274 2r6z_A UPF0341 protein in RSP 99.0 2.6E-10 8.9E-15 88.8 3.2 82 14-102 81-173 (258)
275 3khk_A Type I restriction-modi 98.9 2.7E-09 9.4E-14 91.3 9.2 115 3-124 234-398 (544)
276 1qyr_A KSGA, high level kasuga 98.9 1.1E-09 3.7E-14 85.0 5.5 89 2-102 9-102 (252)
277 3s1s_A Restriction endonucleas 98.8 1.5E-08 5.2E-13 89.1 10.0 110 14-124 319-468 (878)
278 4gqb_A Protein arginine N-meth 98.8 2.6E-08 8.8E-13 86.2 9.0 96 17-118 358-464 (637)
279 2oyr_A UPF0341 protein YHIQ; a 98.8 2.7E-08 9.1E-13 77.3 8.3 86 14-102 84-176 (258)
280 2k4m_A TR8_protein, UPF0146 pr 98.7 5.1E-08 1.7E-12 68.2 6.7 102 2-125 21-125 (153)
281 3c6k_A Spermine synthase; sper 98.6 5.8E-08 2E-12 78.8 7.2 108 15-124 204-334 (381)
282 3evf_A RNA-directed RNA polyme 98.6 9E-08 3.1E-12 74.1 7.5 105 13-125 71-188 (277)
283 3ua3_A Protein arginine N-meth 98.6 5.1E-08 1.7E-12 84.6 5.8 97 17-118 410-531 (745)
284 1wg8_A Predicted S-adenosylmet 98.6 1.6E-07 5.6E-12 73.1 8.0 87 2-102 10-101 (285)
285 3ufb_A Type I restriction-modi 98.6 7.6E-07 2.6E-11 76.1 12.6 116 2-124 205-365 (530)
286 2qy6_A UPF0209 protein YFCK; s 98.6 8.5E-08 2.9E-12 74.5 6.1 105 15-119 59-211 (257)
287 2wk1_A NOVP; transferase, O-me 98.5 3E-07 1E-11 72.2 8.7 103 16-121 106-244 (282)
288 4auk_A Ribosomal RNA large sub 98.4 1.1E-06 3.9E-11 71.0 9.9 85 14-113 209-295 (375)
289 3gcz_A Polyprotein; flavivirus 98.4 7.2E-08 2.5E-12 74.8 1.3 104 13-124 87-204 (282)
290 3tka_A Ribosomal RNA small sub 98.3 8.9E-07 3E-11 70.6 6.5 88 2-100 45-138 (347)
291 2efj_A 3,7-dimethylxanthine me 98.3 8.8E-06 3E-10 66.5 11.5 102 17-125 53-229 (384)
292 3eld_A Methyltransferase; flav 98.2 1.3E-06 4.5E-11 68.2 5.7 105 13-125 78-195 (300)
293 2zig_A TTHA0409, putative modi 98.2 4E-06 1.4E-10 66.4 7.9 56 3-64 225-280 (297)
294 2px2_A Genome polyprotein [con 98.2 1.6E-06 5.6E-11 66.2 4.9 95 13-124 70-186 (269)
295 3b5i_A S-adenosyl-L-methionine 98.1 1.5E-05 5.2E-10 64.9 10.3 108 17-124 53-228 (374)
296 3p8z_A Mtase, non-structural p 98.1 2E-05 6.9E-10 59.4 8.7 104 13-126 75-191 (267)
297 1m6e_X S-adenosyl-L-methionnin 97.9 1E-05 3.5E-10 65.5 5.5 104 18-125 53-213 (359)
298 3lkz_A Non-structural protein 97.9 4.9E-05 1.7E-09 59.2 9.0 104 13-125 91-208 (321)
299 1i4w_A Mitochondrial replicati 97.9 5.4E-05 1.8E-09 61.2 9.2 72 2-82 40-115 (353)
300 1g60_A Adenine-specific methyl 97.9 4.5E-05 1.5E-09 59.2 7.6 55 3-63 202-256 (260)
301 3r24_A NSP16, 2'-O-methyl tran 97.7 9.4E-05 3.2E-09 57.6 7.4 92 14-126 107-222 (344)
302 3two_A Mannitol dehydrogenase; 97.6 0.00015 5E-09 58.6 7.8 92 13-121 173-265 (348)
303 3m6i_A L-arabinitol 4-dehydrog 97.6 0.00015 5.1E-09 58.9 6.9 98 13-121 176-283 (363)
304 1f8f_A Benzyl alcohol dehydrog 97.5 0.00041 1.4E-08 56.4 9.3 97 13-121 187-289 (371)
305 1uuf_A YAHK, zinc-type alcohol 97.5 5.8E-05 2E-09 61.5 3.7 93 13-120 191-287 (369)
306 1e3j_A NADP(H)-dependent ketos 97.5 9.3E-05 3.2E-09 59.8 4.8 96 13-121 165-271 (352)
307 1pl8_A Human sorbitol dehydrog 97.5 0.00031 1.1E-08 56.9 7.8 96 13-121 168-273 (356)
308 3fpc_A NADP-dependent alcohol 97.5 0.00029 1E-08 56.9 7.6 97 13-122 163-267 (352)
309 4ej6_A Putative zinc-binding d 97.5 0.00058 2E-08 55.6 9.4 97 13-121 179-284 (370)
310 2oo3_A Protein involved in cat 97.4 2.7E-05 9.2E-10 60.7 0.9 104 4-119 81-196 (283)
311 2dph_A Formaldehyde dismutase; 97.4 0.00064 2.2E-08 55.8 8.9 95 13-120 182-298 (398)
312 3s2e_A Zinc-containing alcohol 97.4 0.00047 1.6E-08 55.3 7.9 96 13-121 163-263 (340)
313 2h6e_A ADH-4, D-arabinose 1-de 97.4 4.2E-05 1.4E-09 61.7 1.6 97 13-121 168-269 (344)
314 3jv7_A ADH-A; dehydrogenase, n 97.4 0.00041 1.4E-08 55.8 7.1 98 13-122 168-271 (345)
315 3goh_A Alcohol dehydrogenase, 97.3 0.0004 1.4E-08 55.1 6.5 89 13-120 139-228 (315)
316 3uog_A Alcohol dehydrogenase; 97.3 0.00098 3.4E-08 54.0 8.9 96 13-122 186-288 (363)
317 1vj0_A Alcohol dehydrogenase, 97.3 0.00057 1.9E-08 55.8 7.2 96 14-121 193-298 (380)
318 1piw_A Hypothetical zinc-type 97.3 6.5E-05 2.2E-09 61.0 1.3 95 13-121 176-276 (360)
319 1kol_A Formaldehyde dehydrogen 97.2 0.0016 5.3E-08 53.5 9.3 95 13-120 182-299 (398)
320 1p0f_A NADP-dependent alcohol 97.2 0.0015 5.3E-08 53.0 8.9 97 13-121 188-293 (373)
321 3uko_A Alcohol dehydrogenase c 97.2 0.0012 4.2E-08 53.8 8.3 97 13-121 190-295 (378)
322 4eez_A Alcohol dehydrogenase 1 97.2 0.00027 9.2E-09 56.9 4.2 100 13-122 160-264 (348)
323 4dvj_A Putative zinc-dependent 97.2 0.0019 6.6E-08 52.3 9.1 92 16-120 171-269 (363)
324 3jyn_A Quinone oxidoreductase; 97.2 0.0016 5.5E-08 51.9 8.6 96 13-122 137-240 (325)
325 1e3i_A Alcohol dehydrogenase, 97.2 0.0017 5.8E-08 52.8 8.8 96 13-121 192-297 (376)
326 2fzw_A Alcohol dehydrogenase c 97.2 0.0022 7.7E-08 52.0 9.4 97 13-121 187-292 (373)
327 4a2c_A Galactitol-1-phosphate 97.2 0.0035 1.2E-07 50.2 10.4 98 13-122 157-261 (346)
328 2py6_A Methyltransferase FKBM; 97.1 0.002 6.8E-08 53.2 9.0 64 14-81 224-291 (409)
329 1cdo_A Alcohol dehydrogenase; 97.1 0.002 6.8E-08 52.4 8.6 96 13-121 189-294 (374)
330 3ip1_A Alcohol dehydrogenase, 97.1 0.0027 9.3E-08 52.2 9.5 97 13-122 210-319 (404)
331 1rjw_A ADH-HT, alcohol dehydro 97.0 0.002 6.9E-08 51.6 7.9 94 13-121 161-261 (339)
332 2jhf_A Alcohol dehydrogenase E 97.0 0.0027 9.2E-08 51.6 8.7 96 13-121 188-293 (374)
333 2d8a_A PH0655, probable L-thre 97.0 0.0022 7.5E-08 51.6 7.9 95 13-121 165-267 (348)
334 3qwb_A Probable quinone oxidor 97.0 0.0021 7E-08 51.4 7.4 95 13-121 145-247 (334)
335 2cf5_A Atccad5, CAD, cinnamyl 97.0 0.00079 2.7E-08 54.5 4.8 97 13-121 176-275 (357)
336 2b5w_A Glucose dehydrogenase; 96.9 0.0016 5.6E-08 52.6 6.4 92 14-121 164-273 (357)
337 1pqw_A Polyketide synthase; ro 96.9 0.0023 7.8E-08 47.1 6.7 93 13-121 35-137 (198)
338 1eg2_A Modification methylase 96.9 0.0022 7.5E-08 51.1 6.8 55 3-63 232-289 (319)
339 3gms_A Putative NADPH:quinone 96.9 0.0019 6.4E-08 51.8 6.2 96 13-121 141-243 (340)
340 1boo_A Protein (N-4 cytosine-s 96.8 0.0021 7E-08 51.4 6.3 55 3-63 242-296 (323)
341 2vz8_A Fatty acid synthase; tr 96.8 0.00045 1.5E-08 68.7 2.8 100 15-122 1239-1349(2512)
342 2cdc_A Glucose dehydrogenase g 96.8 0.0044 1.5E-07 50.2 8.3 92 17-122 181-279 (366)
343 3krt_A Crotonyl COA reductase; 96.8 0.0057 1.9E-07 51.1 9.1 95 13-121 225-344 (456)
344 2eih_A Alcohol dehydrogenase; 96.8 0.0065 2.2E-07 48.7 9.0 93 13-121 163-265 (343)
345 3tqh_A Quinone oxidoreductase; 96.8 0.0037 1.3E-07 49.7 7.4 93 13-120 149-244 (321)
346 1qor_A Quinone oxidoreductase; 96.8 0.0058 2E-07 48.6 8.5 96 13-121 137-239 (327)
347 3fbg_A Putative arginate lyase 96.8 0.0042 1.4E-07 49.9 7.7 93 16-121 150-248 (346)
348 4eye_A Probable oxidoreductase 96.7 0.0042 1.4E-07 49.9 7.4 95 13-121 156-257 (342)
349 1yqd_A Sinapyl alcohol dehydro 96.7 0.0016 5.5E-08 52.8 5.0 96 14-121 184-282 (366)
350 1jvb_A NAD(H)-dependent alcoho 96.7 0.0032 1.1E-07 50.6 6.7 97 13-121 167-271 (347)
351 3nx4_A Putative oxidoreductase 96.7 0.00098 3.3E-08 53.0 3.3 91 19-122 149-242 (324)
352 2vn8_A Reticulon-4-interacting 96.6 0.00079 2.7E-08 54.8 2.3 94 14-121 181-280 (375)
353 1iz0_A Quinone oxidoreductase; 96.6 0.00045 1.5E-08 54.5 0.7 89 14-120 123-217 (302)
354 2j8z_A Quinone oxidoreductase; 96.5 0.0097 3.3E-07 47.9 8.3 95 13-121 159-261 (354)
355 2dq4_A L-threonine 3-dehydroge 96.5 0.0013 4.3E-08 52.9 2.8 94 13-121 162-262 (343)
356 2c0c_A Zinc binding alcohol de 96.5 0.01 3.4E-07 48.0 8.0 95 13-121 160-261 (362)
357 4b7c_A Probable oxidoreductase 96.4 0.0072 2.5E-07 48.2 6.9 96 13-120 146-247 (336)
358 1tt7_A YHFP; alcohol dehydroge 96.4 0.002 7E-08 51.3 3.6 96 13-121 146-247 (330)
359 4dup_A Quinone oxidoreductase; 96.4 0.011 3.7E-07 47.7 7.8 96 13-122 164-266 (353)
360 1xa0_A Putative NADPH dependen 96.4 0.0065 2.2E-07 48.3 6.4 95 13-120 145-245 (328)
361 2j3h_A NADP-dependent oxidored 96.4 0.01 3.6E-07 47.4 7.6 93 13-120 152-254 (345)
362 3gaz_A Alcohol dehydrogenase s 96.3 0.0022 7.6E-08 51.5 3.3 93 13-121 147-246 (343)
363 2hcy_A Alcohol dehydrogenase 1 96.3 0.0064 2.2E-07 48.8 6.1 95 13-122 166-270 (347)
364 3vyw_A MNMC2; tRNA wobble urid 96.3 0.014 4.7E-07 46.1 7.5 104 17-121 97-226 (308)
365 3g7u_A Cytosine-specific methy 96.3 0.014 4.8E-07 47.6 7.8 71 18-100 3-81 (376)
366 3tos_A CALS11; methyltransfera 96.3 0.026 8.8E-07 43.4 8.8 107 16-122 69-218 (257)
367 1wly_A CAAR, 2-haloacrylate re 96.2 0.018 6.1E-07 45.9 8.2 93 13-121 142-244 (333)
368 4a0s_A Octenoyl-COA reductase/ 96.1 0.0098 3.3E-07 49.5 6.4 96 13-121 217-336 (447)
369 3gqv_A Enoyl reductase; medium 96.1 0.033 1.1E-06 45.2 9.2 93 15-121 163-263 (371)
370 1yb5_A Quinone oxidoreductase; 96.0 0.013 4.4E-07 47.2 6.5 93 13-121 167-269 (351)
371 1h2b_A Alcohol dehydrogenase; 96.0 0.0089 3E-07 48.3 5.6 94 13-121 183-285 (359)
372 1v3u_A Leukotriene B4 12- hydr 96.0 0.017 5.9E-07 45.9 7.0 96 13-121 142-244 (333)
373 1g55_A DNA cytosine methyltran 95.8 0.0094 3.2E-07 48.0 4.7 72 18-99 3-77 (343)
374 2c7p_A Modification methylase 95.8 0.027 9.3E-07 45.0 7.2 70 17-100 11-81 (327)
375 2vhw_A Alanine dehydrogenase; 95.7 0.011 3.6E-07 48.3 4.5 95 16-121 167-268 (377)
376 3ce6_A Adenosylhomocysteinase; 95.6 0.028 9.7E-07 47.4 7.1 89 14-121 271-361 (494)
377 1gu7_A Enoyl-[acyl-carrier-pro 95.6 0.014 4.9E-07 47.0 5.1 95 13-121 163-275 (364)
378 1pjc_A Protein (L-alanine dehy 95.6 0.018 6.3E-07 46.6 5.7 97 17-124 167-270 (361)
379 1zsy_A Mitochondrial 2-enoyl t 95.5 0.077 2.6E-06 42.7 9.1 94 13-120 164-269 (357)
380 3fwz_A Inner membrane protein 95.3 0.15 5.3E-06 34.9 8.8 94 17-124 7-108 (140)
381 2zb4_A Prostaglandin reductase 95.1 0.052 1.8E-06 43.6 6.8 93 13-120 155-259 (357)
382 3d4o_A Dipicolinate synthase s 95.0 0.12 4.1E-06 40.4 8.4 92 16-124 154-247 (293)
383 2eez_A Alanine dehydrogenase; 94.8 0.029 1E-06 45.5 4.6 95 16-121 165-266 (369)
384 2rir_A Dipicolinate synthase, 94.7 0.17 5.7E-06 39.7 8.5 92 16-124 156-249 (300)
385 3c85_A Putative glutathione-re 94.7 0.33 1.1E-05 34.7 9.6 94 17-123 39-141 (183)
386 4dio_A NAD(P) transhydrogenase 94.6 0.17 5.7E-06 41.6 8.5 94 16-123 189-314 (405)
387 3pi7_A NADH oxidoreductase; gr 94.5 0.066 2.3E-06 42.9 6.0 93 15-121 162-263 (349)
388 4a27_A Synaptic vesicle membra 94.4 0.04 1.4E-06 44.2 4.4 94 13-121 139-238 (349)
389 2qrv_A DNA (cytosine-5)-methyl 94.3 0.091 3.1E-06 41.3 6.1 74 15-99 14-92 (295)
390 3gvp_A Adenosylhomocysteinase 94.1 0.17 5.8E-06 41.8 7.6 88 15-121 218-307 (435)
391 3p2y_A Alanine dehydrogenase/p 94.1 0.067 2.3E-06 43.5 5.1 95 16-124 183-305 (381)
392 3pvc_A TRNA 5-methylaminomethy 94.0 0.037 1.3E-06 48.7 3.7 105 16-120 58-210 (689)
393 3ps9_A TRNA 5-methylaminomethy 93.9 0.15 5.3E-06 44.6 7.4 104 17-121 67-219 (676)
394 1x13_A NAD(P) transhydrogenase 93.7 0.069 2.3E-06 43.9 4.6 93 16-122 171-293 (401)
395 4h0n_A DNMT2; SAH binding, tra 93.7 0.099 3.4E-06 41.8 5.4 72 18-100 4-79 (333)
396 1l7d_A Nicotinamide nucleotide 93.7 0.11 3.9E-06 42.3 5.8 92 16-121 171-294 (384)
397 3oig_A Enoyl-[acyl-carrier-pro 93.6 1 3.5E-05 34.1 11.0 80 16-100 6-97 (266)
398 3ubt_Y Modification methylase 93.6 0.19 6.6E-06 39.8 7.0 68 19-100 2-71 (331)
399 4fs3_A Enoyl-[acyl-carrier-pro 93.4 0.73 2.5E-05 35.0 9.8 80 16-100 5-96 (256)
400 3iht_A S-adenosyl-L-methionine 93.2 0.042 1.4E-06 38.7 2.2 95 16-123 40-149 (174)
401 3llv_A Exopolyphosphatase-rela 93.0 0.89 3.1E-05 30.8 8.9 93 17-124 6-106 (141)
402 3dfz_A SIRC, precorrin-2 dehyd 92.9 0.7 2.4E-05 34.6 8.7 95 16-125 30-125 (223)
403 4dcm_A Ribosomal RNA large sub 92.9 0.99 3.4E-05 36.5 10.3 95 16-122 38-137 (375)
404 3qv2_A 5-cytosine DNA methyltr 92.8 0.18 6.2E-06 40.2 5.7 72 17-100 10-86 (327)
405 3grk_A Enoyl-(acyl-carrier-pro 92.8 1.3 4.3E-05 34.4 10.5 78 16-100 30-119 (293)
406 3pxx_A Carveol dehydrogenase; 92.7 1.4 4.9E-05 33.7 10.6 98 16-120 9-152 (287)
407 3n58_A Adenosylhomocysteinase; 92.7 0.41 1.4E-05 39.8 7.6 88 15-121 245-334 (464)
408 2g1u_A Hypothetical protein TM 92.3 0.29 1E-05 34.1 5.7 97 15-124 17-121 (155)
409 4fn4_A Short chain dehydrogena 92.2 0.63 2.1E-05 35.6 7.8 78 16-100 6-94 (254)
410 1zkd_A DUF185; NESG, RPR58, st 92.1 0.71 2.4E-05 37.6 8.4 45 18-62 82-132 (387)
411 3l9w_A Glutathione-regulated p 92.1 0.8 2.7E-05 37.6 8.8 95 17-125 4-106 (413)
412 2zig_A TTHA0409, putative modi 92.1 0.11 3.7E-06 40.8 3.4 52 72-123 20-99 (297)
413 3ic5_A Putative saccharopine d 92.0 0.69 2.4E-05 30.0 7.1 88 16-117 4-96 (118)
414 4eso_A Putative oxidoreductase 91.6 0.9 3.1E-05 34.4 8.1 75 16-100 7-92 (255)
415 1lss_A TRK system potassium up 91.6 2.1 7.1E-05 28.5 10.5 94 17-124 4-105 (140)
416 2vz8_A Fatty acid synthase; tr 91.4 0.3 1E-05 49.2 6.3 99 13-120 1664-1769(2512)
417 4fgs_A Probable dehydrogenase 91.3 1 3.4E-05 34.9 8.1 75 16-100 28-113 (273)
418 1rjd_A PPM1P, carboxy methyl t 91.2 4.7 0.00016 32.0 12.1 102 15-119 96-230 (334)
419 3ijr_A Oxidoreductase, short c 91.0 2.1 7.1E-05 33.1 9.8 98 16-120 46-181 (291)
420 3v2g_A 3-oxoacyl-[acyl-carrier 90.8 2.9 0.0001 31.9 10.4 99 16-121 30-165 (271)
421 3is3_A 17BETA-hydroxysteroid d 90.8 2.3 7.9E-05 32.3 9.8 99 16-121 17-152 (270)
422 1id1_A Putative potassium chan 90.8 0.81 2.8E-05 31.6 6.6 98 17-125 3-109 (153)
423 3h9u_A Adenosylhomocysteinase; 90.7 0.6 2E-05 38.6 6.6 88 15-121 209-298 (436)
424 3me5_A Cytosine-specific methy 90.7 0.32 1.1E-05 40.8 5.1 55 18-82 89-144 (482)
425 3r3s_A Oxidoreductase; structu 90.6 2.1 7.1E-05 33.2 9.5 99 16-121 48-185 (294)
426 3ggo_A Prephenate dehydrogenas 90.6 2.4 8.3E-05 33.3 9.9 88 18-119 34-126 (314)
427 3slk_A Polyketide synthase ext 90.5 0.052 1.8E-06 48.6 0.1 93 13-121 342-442 (795)
428 3oj0_A Glutr, glutamyl-tRNA re 90.2 0.18 6E-06 34.8 2.7 89 16-120 20-109 (144)
429 1boo_A Protein (N-4 cytosine-s 90.0 0.19 6.6E-06 39.9 3.1 53 72-124 13-87 (323)
430 3k31_A Enoyl-(acyl-carrier-pro 89.6 2.9 9.9E-05 32.3 9.6 78 16-100 29-118 (296)
431 4f3n_A Uncharacterized ACR, CO 89.4 0.48 1.7E-05 39.1 5.0 47 17-63 138-188 (432)
432 3o26_A Salutaridine reductase; 89.3 1.6 5.3E-05 33.7 7.8 80 16-101 11-102 (311)
433 3ond_A Adenosylhomocysteinase; 89.2 1.4 4.8E-05 37.0 7.7 87 15-120 263-351 (488)
434 4g81_D Putative hexonate dehyd 89.1 0.73 2.5E-05 35.2 5.6 78 16-100 8-96 (255)
435 3l4b_C TRKA K+ channel protien 89.1 2.5 8.4E-05 31.0 8.4 94 19-125 2-103 (218)
436 3sju_A Keto reductase; short-c 88.9 1.5 5.2E-05 33.6 7.4 79 15-100 22-111 (279)
437 3abi_A Putative uncharacterize 88.8 1.1 3.7E-05 36.0 6.7 68 18-100 17-87 (365)
438 3v8b_A Putative dehydrogenase, 88.1 1.6 5.4E-05 33.6 7.0 78 16-100 27-115 (283)
439 4egf_A L-xylulose reductase; s 88.0 2.8 9.5E-05 31.8 8.3 79 16-100 19-108 (266)
440 1ae1_A Tropinone reductase-I; 87.8 2.3 7.7E-05 32.4 7.8 78 16-100 20-109 (273)
441 3ksu_A 3-oxoacyl-acyl carrier 87.8 2.8 9.7E-05 31.7 8.3 78 16-100 10-101 (262)
442 1jw9_B Molybdopterin biosynthe 87.7 0.36 1.2E-05 36.8 3.1 81 17-102 31-133 (249)
443 2ae2_A Protein (tropinone redu 87.2 2.4 8.2E-05 32.0 7.5 78 16-100 8-97 (260)
444 3sx2_A Putative 3-ketoacyl-(ac 87.0 3 0.0001 31.8 8.0 78 16-100 12-112 (278)
445 4da9_A Short-chain dehydrogena 86.7 4.2 0.00014 31.1 8.7 78 16-100 28-117 (280)
446 3u5t_A 3-oxoacyl-[acyl-carrier 86.6 2.6 9E-05 32.1 7.5 78 16-100 26-115 (267)
447 3t7c_A Carveol dehydrogenase; 86.6 2.9 9.9E-05 32.3 7.8 78 16-100 27-127 (299)
448 3i1j_A Oxidoreductase, short c 86.5 4.1 0.00014 30.3 8.4 79 16-100 13-104 (247)
449 1g0o_A Trihydroxynaphthalene r 86.5 5.4 0.00019 30.4 9.3 77 17-100 29-117 (283)
450 3f1l_A Uncharacterized oxidore 86.4 4.5 0.00015 30.3 8.7 79 16-100 11-102 (252)
451 4imr_A 3-oxoacyl-(acyl-carrier 86.0 2.1 7E-05 32.8 6.6 78 16-100 32-119 (275)
452 1v8b_A Adenosylhomocysteinase; 86.0 2.9 9.8E-05 35.1 7.8 87 15-120 255-343 (479)
453 3uve_A Carveol dehydrogenase ( 86.0 3 0.0001 31.9 7.6 78 16-100 10-114 (286)
454 3ucx_A Short chain dehydrogena 85.9 5.8 0.0002 29.9 9.1 78 16-100 10-98 (264)
455 3swr_A DNA (cytosine-5)-methyl 85.8 1.3 4.5E-05 40.6 6.0 41 17-60 540-582 (1002)
456 3qiv_A Short-chain dehydrogena 85.8 4.6 0.00016 30.1 8.4 78 16-100 8-96 (253)
457 3ius_A Uncharacterized conserv 85.4 6.2 0.00021 29.9 9.1 67 18-100 6-73 (286)
458 3b1f_A Putative prephenate deh 85.3 5.8 0.0002 30.4 8.9 86 18-118 7-98 (290)
459 3tjr_A Short chain dehydrogena 85.3 5.2 0.00018 30.9 8.7 78 16-100 30-118 (301)
460 2g5c_A Prephenate dehydrogenas 85.1 5.1 0.00017 30.5 8.5 87 19-119 3-94 (281)
461 3h7a_A Short chain dehydrogena 85.0 3.3 0.00011 31.2 7.2 78 16-100 6-93 (252)
462 2aef_A Calcium-gated potassium 84.9 6.8 0.00023 28.9 8.9 94 16-125 8-109 (234)
463 4dry_A 3-oxoacyl-[acyl-carrier 84.9 2.4 8.1E-05 32.6 6.5 79 16-100 32-121 (281)
464 4hp8_A 2-deoxy-D-gluconate 3-d 84.7 6.9 0.00024 29.6 8.8 76 16-100 8-89 (247)
465 3rkr_A Short chain oxidoreduct 84.2 4.7 0.00016 30.4 7.9 78 16-100 28-116 (262)
466 2f1k_A Prephenate dehydrogenas 83.9 5.9 0.0002 30.1 8.3 83 19-118 2-88 (279)
467 3oec_A Carveol dehydrogenase ( 83.8 3.7 0.00013 32.1 7.2 78 16-100 45-145 (317)
468 2hmt_A YUAA protein; RCK, KTN, 83.6 6.2 0.00021 26.2 7.6 92 17-123 6-106 (144)
469 1xq1_A Putative tropinone redu 83.5 3.6 0.00012 31.0 6.9 78 16-100 13-102 (266)
470 3o38_A Short chain dehydrogena 83.3 6.6 0.00022 29.5 8.4 79 16-100 21-111 (266)
471 3nyw_A Putative oxidoreductase 83.1 4.7 0.00016 30.2 7.4 81 16-100 6-97 (250)
472 3d64_A Adenosylhomocysteinase; 83.0 4.2 0.00014 34.2 7.5 87 15-120 275-363 (494)
473 3iup_A Putative NADPH:quinone 83.0 1.4 4.9E-05 35.5 4.7 84 15-111 169-261 (379)
474 3g0o_A 3-hydroxyisobutyrate de 82.8 14 0.00048 28.5 10.2 86 17-120 7-101 (303)
475 3tfo_A Putative 3-oxoacyl-(acy 82.8 5.7 0.00019 30.2 7.8 77 17-100 4-91 (264)
476 3ado_A Lambda-crystallin; L-gu 82.6 2.3 7.8E-05 33.7 5.5 44 16-62 5-50 (319)
477 1e7w_A Pteridine reductase; di 82.5 6.8 0.00023 30.1 8.3 62 16-84 8-72 (291)
478 3ioy_A Short-chain dehydrogena 82.1 9.6 0.00033 29.7 9.1 80 16-100 7-97 (319)
479 3lyl_A 3-oxoacyl-(acyl-carrier 81.7 7.6 0.00026 28.8 8.1 78 16-100 4-92 (247)
480 3e8x_A Putative NAD-dependent 81.7 8.7 0.0003 28.1 8.4 72 16-100 20-94 (236)
481 2ew2_A 2-dehydropantoate 2-red 81.7 16 0.00053 28.0 10.2 89 18-121 4-108 (316)
482 3awd_A GOX2181, putative polyo 81.5 9.8 0.00034 28.3 8.7 77 16-99 12-99 (260)
483 1zcj_A Peroxisomal bifunctiona 81.2 11 0.00039 31.2 9.6 96 18-121 38-150 (463)
484 3mog_A Probable 3-hydroxybutyr 81.2 9.1 0.00031 32.1 9.0 96 18-121 6-120 (483)
485 3gaf_A 7-alpha-hydroxysteroid 81.1 6.4 0.00022 29.5 7.5 78 16-100 11-99 (256)
486 1yb1_A 17-beta-hydroxysteroid 81.1 10 0.00035 28.6 8.7 78 16-100 30-118 (272)
487 3f9i_A 3-oxoacyl-[acyl-carrier 81.0 4.6 0.00016 30.0 6.6 76 15-100 12-94 (249)
488 1bg6_A N-(1-D-carboxylethyl)-L 80.8 8.4 0.00029 30.3 8.4 89 18-120 5-108 (359)
489 3t4x_A Oxidoreductase, short c 80.8 5.6 0.00019 30.1 7.1 80 16-100 9-95 (267)
490 2jah_A Clavulanic acid dehydro 80.7 11 0.00038 28.0 8.7 78 16-100 6-94 (247)
491 3cea_A MYO-inositol 2-dehydrog 80.5 4.8 0.00017 31.7 6.9 90 17-119 8-100 (346)
492 2qhx_A Pteridine reductase 1; 80.5 8.5 0.00029 30.2 8.3 62 17-84 46-109 (328)
493 3jtm_A Formate dehydrogenase, 80.4 2.2 7.4E-05 34.3 4.7 88 16-121 163-256 (351)
494 3hwr_A 2-dehydropantoate 2-red 79.9 8.5 0.00029 30.1 8.1 99 16-123 18-122 (318)
495 3r1i_A Short-chain type dehydr 79.8 6.9 0.00023 29.8 7.4 78 16-100 31-119 (276)
496 2rhc_B Actinorhodin polyketide 79.7 12 0.0004 28.4 8.7 78 16-100 21-109 (277)
497 2uyo_A Hypothetical protein ML 79.6 20 0.00069 28.0 13.3 102 18-124 104-221 (310)
498 3imf_A Short chain dehydrogena 79.5 5.5 0.00019 29.9 6.7 78 16-100 5-93 (257)
499 1zem_A Xylitol dehydrogenase; 79.3 11 0.00039 28.2 8.4 78 16-100 6-94 (262)
500 1ldn_A L-lactate dehydrogenase 79.3 21 0.0007 27.9 10.2 101 16-124 5-125 (316)
No 1
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.85 E-value=3.1e-20 Score=142.36 Aligned_cols=156 Identities=38% Similarity=0.670 Sum_probs=124.0
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
.+.+++.+..++.++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...+...+...++.+..+|..
T Consensus 64 ~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 143 (226)
T 1i1n_A 64 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR 143 (226)
T ss_dssp HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc
Confidence 44566666545678999999999999999999998765569999999999999999988764310000257999999987
Q ss_pred CCCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceecccccc
Q psy14962 83 TGLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPLINAD 160 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (216)
......++||+|+++.+.+++++.+.++|||||++++++.+......+..+.+..++.+......+.. |.|+....
T Consensus 144 ~~~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--f~p~~~~~ 219 (226)
T 1i1n_A 144 MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVI--YVPLTDKE 219 (226)
T ss_dssp GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEESCTTSCEEEEEEEECTTSCEEEEEEEEEC--CCBCCCHH
T ss_pred cCcccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEecCCCceEEEEEEEcCCCcEEEEEcCceE--EEeccCCc
Confidence 55444568999999999999999999999999999999887655566666777667777777777777 88887643
No 2
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.83 E-value=1.2e-19 Score=139.25 Aligned_cols=153 Identities=29% Similarity=0.508 Sum_probs=121.2
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCC-----CcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEE
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGK-----TGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHL 76 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~-----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 76 (216)
+.+.+++.+..++.++.+|||+|||+|+.+..+++..+. ..+|+++|+++.+++.|++++...+...+...++.+
T Consensus 70 ~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 149 (227)
T 1r18_A 70 MHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLI 149 (227)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEE
Confidence 345667777545788999999999999999999987542 249999999999999999987663200000157999
Q ss_pred EeccCCCCCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceecc
Q psy14962 77 RCRDGRTGLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPL 156 (216)
Q Consensus 77 ~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (216)
..+|........++||+|++....+++++.+.++|||||++++.+.++.....+..+.+..++.+......+.. |.|+
T Consensus 150 ~~~d~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~--~~p~ 227 (227)
T 1r18_A 150 VEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVM--YVPL 227 (227)
T ss_dssp EESCGGGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESCSSSCEEEEEEEECTTSCEEEEEEEEEC--CCCC
T ss_pred EECCcccCCCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEecCCCceEEEEEEEcCCCcEEEEEeccEE--EeeC
Confidence 99998764444478999999999999999999999999999999987766678888888777778877777777 7664
No 3
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.82 E-value=6.1e-19 Score=133.59 Aligned_cols=142 Identities=32% Similarity=0.514 Sum_probs=116.4
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
...+++.+. +.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+. .++.+..+|..
T Consensus 66 ~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~ 135 (210)
T 3lbf_A 66 VARMTELLE--LTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDL-----HNVSTRHGDGW 135 (210)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGG
T ss_pred HHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC-----CceEEEECCcc
Confidence 445555554 578899999999999999999988 35999999999999999999988553 57999999987
Q ss_pred CCCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceeccccc
Q psy14962 83 TGLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPLINA 159 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (216)
......++||+|+++..++++++.+.+.|+|||++++.+++. ...+..+.+. +..+......... |.|+.+.
T Consensus 136 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~--f~pl~~~ 207 (210)
T 3lbf_A 136 QGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEE--HQYLKRVRRR-GGEFIIDTVEAVR--FVPLVKG 207 (210)
T ss_dssp GCCGGGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEECSS--SCEEEEEEEE-TTEEEEEEEEECC--CCBCCCS
T ss_pred cCCccCCCccEEEEccchhhhhHHHHHhcccCcEEEEEEcCC--ceEEEEEEEc-CCeEEEEEeccEE--EEEccCc
Confidence 665556789999999999999999999999999999999883 3555556553 4567777777777 8887653
No 4
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.81 E-value=4.6e-19 Score=135.89 Aligned_cols=152 Identities=20% Similarity=0.334 Sum_probs=119.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhC----CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVG----KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC 78 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~----~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 78 (216)
.+.+++.+...+.++.+|||+|||+|..+..+++..+ +..+|+++|+++.+++.|++++...+...+...++.++.
T Consensus 67 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 146 (227)
T 2pbf_A 67 HALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH 146 (227)
T ss_dssp HHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE
Confidence 4456666654577899999999999999999999865 456999999999999999999887541001125799999
Q ss_pred ccCCCCC----CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeecee
Q psy14962 79 RDGRTGL----LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFIN 154 (216)
Q Consensus 79 ~d~~~~~----~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (216)
+|..... ...++||+|++....+++++.+.++|+|||++++.++... ...+..+.+ .++.+......++. |.
T Consensus 147 ~d~~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~--~~ 222 (227)
T 2pbf_A 147 KNIYQVNEEEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIEEDY-TQVLYEITK-KNGKIIKDRLFDVC--FV 222 (227)
T ss_dssp CCGGGCCHHHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEETT-EEEEEEEEC-SCC-CEEEEEEEEC--CC
T ss_pred CChHhcccccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEccCC-ceEEEEEEE-eCCeEEEEEeccEE--EE
Confidence 9987654 3457899999999999999999999999999999987632 255556666 56677777788877 88
Q ss_pred cccc
Q psy14962 155 PLIN 158 (216)
Q Consensus 155 ~~~~ 158 (216)
|+.+
T Consensus 223 pl~~ 226 (227)
T 2pbf_A 223 SLKK 226 (227)
T ss_dssp BCCC
T ss_pred eccC
Confidence 7753
No 5
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.80 E-value=2.8e-18 Score=130.44 Aligned_cols=143 Identities=32% Similarity=0.537 Sum_probs=115.6
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. +.++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...+. .++.+..+|...
T Consensus 67 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~ 139 (215)
T 2yxe_A 67 GMMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-----DNVIVIVGDGTL 139 (215)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEESCGGG
T ss_pred HHHHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCeEEEECCccc
Confidence 34555553 57889999999999999999999876556999999999999999999887653 578999999864
Q ss_pred CCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceecccc
Q psy14962 84 GLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPLIN 158 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (216)
.....++||+|++..+++++...+.++|+|||++++.+.+.. ..+..+.+.. ..+......+.. |.|+..
T Consensus 140 ~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~--~~p~~~ 209 (215)
T 2yxe_A 140 GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRYL--QRLVLAEKRG-DEIIIKDCGPVA--FVPLVG 209 (215)
T ss_dssp CCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESSSS--EEEEEEEEET-TEEEEEEEEEEC--CCBCBS
T ss_pred CCCCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEECCCC--cEEEEEEEeC-CEEEEEEeccEE--EEeccc
Confidence 444356899999999999999999999999999999988764 6777776653 356666667666 777654
No 6
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.80 E-value=2.9e-18 Score=132.29 Aligned_cols=145 Identities=27% Similarity=0.476 Sum_probs=118.2
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. +.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.|++++...+. .++.+..+|..
T Consensus 80 ~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~ 150 (235)
T 1jg1_A 80 VAIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV-----KNVHVILGDGS 150 (235)
T ss_dssp HHHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGG
T ss_pred HHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC-----CCcEEEECCcc
Confidence 445556553 67889999999999999999999864 5999999999999999999887553 56899999974
Q ss_pred CCCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceeccccc
Q psy14962 83 TGLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPLINA 159 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (216)
.......+||+|++..++++++..+.++|+|||++++.+++......+..+.+ .++.+......... |.|+...
T Consensus 151 ~~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~--f~p~~~~ 224 (235)
T 1jg1_A 151 KGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYHLWQELLEVRK-TKDGIKIKNHGGVA--FVPLIGE 224 (235)
T ss_dssp GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSSSCEEEEEEEE-ETTEEEEEEEEEEC--CCBCBST
T ss_pred cCCCCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecCCCccEEEEEEE-eCCeEEEEEeccEE--EEEccCC
Confidence 44333456999999999999999999999999999999988765567777766 35667777778887 8888754
No 7
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.78 E-value=2.1e-18 Score=135.07 Aligned_cols=111 Identities=18% Similarity=0.196 Sum_probs=90.9
Q ss_pred HHhcccCCCCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC
Q psy14962 8 ELLEPKIQEGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL 86 (216)
Q Consensus 8 ~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (216)
.++...+++|.+|||+|||+|..+..+++.+. ++.+|+|+|+|+.|++.|++++...+. ..++.++++|+.....
T Consensus 62 ~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~----~~~v~~~~~D~~~~~~ 137 (261)
T 4gek_A 62 MLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA----PTPVDVIEGDIRDIAI 137 (261)
T ss_dssp HHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC----SSCEEEEESCTTTCCC
T ss_pred HHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc----CceEEEeecccccccc
Confidence 33444578999999999999999999998764 456999999999999999999887543 3689999999876543
Q ss_pred CCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 87 HQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+.||+|++...+++ ++++++++|||||.+++.....
T Consensus 138 --~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 138 --ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp --CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred --cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 46999999888764 4578999999999999975443
No 8
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.76 E-value=2.9e-17 Score=132.13 Aligned_cols=147 Identities=27% Similarity=0.471 Sum_probs=113.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
...+++.+. +.++.+|||+|||+|..+..+++..+...+|+++|+++++++.|++++...++ .++.+..+|..
T Consensus 64 ~~~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~-----~~v~~~~~d~~ 136 (317)
T 1dl5_A 64 MALFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-----ENVIFVCGDGY 136 (317)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGG
T ss_pred HHHHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCeEEEECChh
Confidence 344555553 57899999999999999999999865345799999999999999999887653 56999999987
Q ss_pred CCCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCC-CcceEEEEEecCCCceeeeeeeeeeeceeccccc
Q psy14962 83 TGLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSK-SYHRMTVIDRSEDGTHFQKYEISLENFINPLINA 159 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (216)
......++||+|++..+++++.+.+.+.|||||++++.+.+.. ....+..+.+.. ..+.....++.. +.|....
T Consensus 137 ~~~~~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~--~~p~~~~ 211 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKD-PYLVGNYKLETR--FITAGGN 211 (317)
T ss_dssp GCCGGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEET-TEEEEEEEEECC--CCBCCGG
T ss_pred hccccCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEECCCCcccceEEEEEEeC-CcEEEEEeccEE--EEEccCc
Confidence 6554457899999999999999999999999999999986653 124454444432 356666666655 6666543
No 9
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.75 E-value=1.6e-18 Score=134.97 Aligned_cols=163 Identities=16% Similarity=0.197 Sum_probs=111.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|..+..+++.. + .+|+++|+++.+++.|+++.. ..++.++.+|+.......++||+|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTT--------SPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCC--------CTTEEEEECCGGGCCCCTTCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhc--------cCCeEEEEcchhhCCCCCCCeEEE
Confidence 378899999999999999999873 2 299999999999999988754 267999999987655556889999
Q ss_pred EecCCCCc------hHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceeccccc---cccccc
Q psy14962 95 YLSTYVPE------IPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPLINA---DEQNDN 165 (216)
Q Consensus 95 ~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 165 (216)
++...+++ +++.+.++|+|||.+++.+.++...... ...+......... ..+...+ ......
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 183 (253)
T 3g5l_A 113 LSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADG-------RQDWYTDETGNKL--HWPVDRYFNESMRTSH 183 (253)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSS-------SCSCEECSSCCEE--EEEECCTTCCCEEEEE
T ss_pred EEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCc-------cccceeccCCceE--EEEeccccccceEEEe
Confidence 99988765 5688999999999999987765311100 0000000000000 0011000 000111
Q ss_pred hhhhhcccccCcceEEEeeccccccccccccCCCCchhh
Q psy14962 166 WLYQQSRSEDGTHFQKYEISLENFINPLINADEQNDNWL 204 (216)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~agf~~~~~~ 204 (216)
|. ......++++.+++.+.|.++||++.+..
T Consensus 184 ~~--------~~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 184 FL--------GEDVQKYHRTVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp ET--------TEEEEEECCCHHHHHHHHHHTTEEEEEEE
T ss_pred ec--------cccCccEecCHHHHHHHHHHcCCeeeeee
Confidence 22 12456677799999999999999987644
No 10
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.73 E-value=1.9e-16 Score=121.48 Aligned_cols=138 Identities=21% Similarity=0.364 Sum_probs=103.9
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. +.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++... .++.++.+|+.
T Consensus 59 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~-------~~v~~~~~d~~ 126 (231)
T 1vbf_A 59 GIFMLDELD--LHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYY-------NNIKLILGDGT 126 (231)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTC-------SSEEEEESCGG
T ss_pred HHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhc-------CCeEEEECCcc
Confidence 345555553 5788999999999999999999883 59999999999999999887652 27899999987
Q ss_pred CCCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceecc
Q psy14962 83 TGLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPL 156 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (216)
......++||+|++..+++++...+.++|+|||++++.+++.. ...+..+.+ ....+......+.. +.|+
T Consensus 127 ~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~--~~~~ 196 (231)
T 1vbf_A 127 LGYEEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIGVGR-VQKLYKVIK-KGNSPSLENLGEVM--FGRI 196 (231)
T ss_dssp GCCGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEECSSS-SEEEEEEEC-CTTSCEEEEEEEEC--CCBC
T ss_pred cccccCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEcCCC-ccEEEEEEE-cCCeeEEEEeccEE--EEEc
Confidence 6444457899999999999999999999999999999987664 244444443 23333444444433 4444
No 11
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.72 E-value=1.3e-17 Score=128.74 Aligned_cols=109 Identities=20% Similarity=0.208 Sum_probs=90.4
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
+++.+...+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++.. ..++.++.+|+....
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGE--------GPDLSFIKGDLSSLP 111 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTC--------BTTEEEEECBTTBCS
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcc--------cCCceEEEcchhcCC
Confidence 34444445678899999999999999999987 4599999999999999987642 267999999998766
Q ss_pred CCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 86 LHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
..+++||+|++...+++ ++..+.++|+|||++++...++.
T Consensus 112 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 112 FENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp SCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCc
Confidence 56789999999988865 56889999999999999876654
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.72 E-value=1.3e-16 Score=124.26 Aligned_cols=110 Identities=23% Similarity=0.260 Sum_probs=91.0
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. +.++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|++++...++ ..++.+..+|+..
T Consensus 26 ~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 26 ATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGV----SERVHFIHNDAAG 97 (256)
T ss_dssp HHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCCTT
T ss_pred HHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCC----CcceEEEECChHh
Confidence 34445443 5788999999999999999999886 34999999999999999999887653 2579999999976
Q ss_pred CCCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeec
Q psy14962 84 GLLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 122 (216)
... +++||+|++...+++ +++++.++|||||++++..+
T Consensus 98 ~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 98 YVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 555 678999999877655 47899999999999999654
No 13
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.71 E-value=6e-17 Score=124.00 Aligned_cols=112 Identities=22% Similarity=0.368 Sum_probs=90.5
Q ss_pred HHHHHHHhc-ccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 3 QARIIELLE-PKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 3 ~~~~~~~l~-~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
.+.++..+. ..++||.+|||+|||+|+.+..+++.+++.++|+++|+++.|++.+++++.+ ..|+..+..|.
T Consensus 63 aa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-------~~ni~~V~~d~ 135 (233)
T 4df3_A 63 AAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-------RRNIFPILGDA 135 (233)
T ss_dssp HHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-------CTTEEEEESCT
T ss_pred HHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-------hcCeeEEEEec
Confidence 344444443 3478999999999999999999999999989999999999999999887655 35788888887
Q ss_pred CCCC---CCCCCccEEEecCCCCc----hHHHHHhcCCCCeEEEEee
Q psy14962 82 RTGL---LHQAPFDAIYLSTYVPE----IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 82 ~~~~---~~~~~~D~i~~~~~~~~----~~~~~~~~L~~gG~lv~~~ 121 (216)
.... ...+.+|+|++....+. ++.++.+.|||||++++.+
T Consensus 136 ~~p~~~~~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 136 RFPEKYRHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp TCGGGGTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCccccccccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 5322 23468999999877765 5678889999999999864
No 14
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.71 E-value=1.7e-17 Score=129.53 Aligned_cols=105 Identities=20% Similarity=0.155 Sum_probs=86.7
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
+.+.+......+.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|++ ..++.+.++|++...
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~e~~~ 94 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-----------HPRVTYAVAPAEDTG 94 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-----------CTTEEEEECCTTCCC
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-----------cCCceeehhhhhhhc
Confidence 34444444456789999999999999999987 3599999999999987753 257999999998777
Q ss_pred CCCCCccEEEecCCCCc-----hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 LHQAPFDAIYLSTYVPE-----IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~-----~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.++++||+|++...+++ ++.++.++|||||+|++.+...
T Consensus 95 ~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 95 LPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp CCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 77889999999998876 5689999999999999877654
No 15
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.71 E-value=3.8e-16 Score=117.73 Aligned_cols=112 Identities=21% Similarity=0.225 Sum_probs=92.3
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. +.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+. .+++++.+|+...
T Consensus 31 ~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~ 102 (204)
T 3e05_A 31 VTLSKLR--LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVA-----RNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTC-----TTEEEEECCTTTT
T ss_pred HHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCC-----CcEEEEeCChhhh
Confidence 3444443 5788999999999999999999884 457999999999999999999888663 6899999998655
Q ss_pred CCCCCCccEEEecCCCC---chHHHHHhcCCCCeEEEEeecCC
Q psy14962 85 LLHQAPFDAIYLSTYVP---EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~---~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
....++||+|+++.... .+++.+.++|+|||++++.....
T Consensus 103 ~~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp CTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred hhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 54446799999998754 46789999999999999986654
No 16
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.71 E-value=7.2e-18 Score=133.54 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 93 (216)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...++ ..++.++.+|+.... ...++||+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~fD~ 139 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGV----SDNMQFIHCAAQDVASHLETPVDL 139 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CC----GGGEEEEESCGGGTGGGCSSCEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC----CcceEEEEcCHHHhhhhcCCCceE
Confidence 34679999999999999999987 45999999999999999999887543 257999999987654 34678999
Q ss_pred EEecCCCCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ +++.+.++|||||++++..++.
T Consensus 140 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 140 ILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred EEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 999988765 5689999999999999987654
No 17
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.71 E-value=9e-17 Score=125.74 Aligned_cols=104 Identities=20% Similarity=0.170 Sum_probs=84.7
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+.+.+...+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++. .++.++.+|+...
T Consensus 39 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 105 (263)
T 3pfg_A 39 DLAALVRRHSPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRN----------PDAVLHHGDMRDF 105 (263)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTTC
T ss_pred HHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhC----------CCCEEEECChHHC
Confidence 444555545567789999999999999999887 349999999999999998863 3689999998765
Q ss_pred CCCCCCccEEEecC-CCCc---------hHHHHHhcCCCCeEEEEeec
Q psy14962 85 LLHQAPFDAIYLST-YVPE---------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 85 ~~~~~~~D~i~~~~-~~~~---------~~~~~~~~L~~gG~lv~~~~ 122 (216)
.. .++||+|++.. .+++ +++.+.++|+|||.+++...
T Consensus 106 ~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 106 SL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp CC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred Cc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 44 67899999987 6654 35788899999999999754
No 18
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.71 E-value=5.2e-17 Score=123.29 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=88.8
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. .+.++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++ .+ ..++.++.+|+..
T Consensus 35 ~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~-----~~~~~~~~~d~~~ 101 (218)
T 3ou2_A 35 PAALERLR-AGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HG-----LDNVEFRQQDLFD 101 (218)
T ss_dssp HHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GC-----CTTEEEEECCTTS
T ss_pred HHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cC-----CCCeEEEeccccc
Confidence 44556554 3677889999999999999999988 4599999999999999987 22 2679999999876
Q ss_pred CCCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 84 GLLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
. ...++||+|++...+++ +++.+.++|+|||.+++...++.
T Consensus 102 ~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 102 W-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp C-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred C-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 6 55678999999988755 45788899999999999877663
No 19
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.71 E-value=4.8e-16 Score=117.39 Aligned_cols=112 Identities=19% Similarity=0.238 Sum_probs=91.6
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. +.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++...+. ..++.++.+|+...
T Consensus 46 ~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 46 LTLAALA--PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGL----SPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCTTGG
T ss_pred HHHHhcC--CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC----CCCEEEEeCchhhh
Confidence 3444443 578899999999999999999988 45999999999999999999888653 13899999998764
Q ss_pred CCCCCCccEEEecCCCCc-hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 85 LLHQAPFDAIYLSTYVPE-IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~-~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
......||+|+++..... +++.+.++|+|||++++......
T Consensus 117 ~~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (204)
T 3njr_A 117 LADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVTLE 158 (204)
T ss_dssp GTTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECSHH
T ss_pred cccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecCcc
Confidence 444457999999876644 78999999999999999877653
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.71 E-value=2.4e-16 Score=119.88 Aligned_cols=115 Identities=23% Similarity=0.372 Sum_probs=96.2
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. +.++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...+. .++.++.+|+..
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~ 99 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL-----KNVEVLKSEENK 99 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECBTTB
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeccccc
Confidence 34555553 57889999999999999999999976667999999999999999999887653 579999999876
Q ss_pred CCCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 84 GLLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
....+++||+|++...+++ +++.+.++|+|||.+++......
T Consensus 100 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 100 IPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp CSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 6556678999999988765 56889999999999999765543
No 21
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.70 E-value=1.7e-17 Score=128.14 Aligned_cols=165 Identities=18% Similarity=0.223 Sum_probs=110.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.++++... .++.+..+|+.......++||+
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD--------TGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGGCCCCTTCEEE
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhhccCCCCCceE
Confidence 357889999999999999999887 2 23999999999999999876432 4689999998765555678999
Q ss_pred EEecCCCCc------hHHHHHhcCCCCeEEEEeecCCCCcceE-EEEEecCCCceeeeeeeeeeeceeccccccccccch
Q psy14962 94 IYLSTYVPE------IPYSILLQLKPGGRLVCGVGKSKSYHRM-TVIDRSEDGTHFQKYEISLENFINPLINADEQNDNW 166 (216)
Q Consensus 94 i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
|++...+++ +++.+.++|+|||++++.++++...... ..+.....+.. ..... ...........|
T Consensus 111 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~ 182 (243)
T 3bkw_A 111 AYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRR----TWPID----RYLVEGPRKTDW 182 (243)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCE----EEEEC----CTTCCEEECTTH
T ss_pred EEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCce----EEeec----ccccccceeeee
Confidence 999888755 4688999999999999988665210000 00000001100 00000 000000111224
Q ss_pred hhhhcccccCcceEEEeeccccccccccccCCCCchhh
Q psy14962 167 LYQQSRSEDGTHFQKYEISLENFINPLINADEQNDNWL 204 (216)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~agf~~~~~~ 204 (216)
+.. ....++++.+++.+.|.++||++..+.
T Consensus 183 ~~~--------~~~~~~~t~~~~~~~l~~aGF~~~~~~ 212 (243)
T 3bkw_A 183 LAK--------GVVKHHRTVGTTLNALIRSGFAIEHVE 212 (243)
T ss_dssp HHH--------SCCEEECCHHHHHHHHHHTTCEEEEEE
T ss_pred ccC--------ceEEEeccHHHHHHHHHHcCCEeeeec
Confidence 322 244566789999999999999987654
No 22
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=1.4e-16 Score=118.12 Aligned_cols=112 Identities=18% Similarity=0.191 Sum_probs=86.0
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+...+...+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++++...++ .++.++..+....
T Consensus 11 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~~~~~l 82 (185)
T 3mti_A 11 MSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-----ENTELILDGHENL 82 (185)
T ss_dssp HHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-----CCEEEEESCGGGG
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCcHHHH
Confidence 334445556788999999999999999999987 45999999999999999999988653 6889998665532
Q ss_pred C-CCCCCccEEEecCCC-C--------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 85 L-LHQAPFDAIYLSTYV-P--------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~-~~~~~~D~i~~~~~~-~--------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
. ..+++||+|+++.+. + ..+..+.++|||||++++.++..
T Consensus 83 ~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 83 DHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp GGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred HhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 1 225689999987322 2 13478889999999999977643
No 23
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.70 E-value=2.2e-16 Score=123.87 Aligned_cols=105 Identities=19% Similarity=0.158 Sum_probs=89.9
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.++.+|||+|||+|..+..+++. +..+|+|+|+++.+++.|++++...++ .+++.++.+|+.......++||
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~fD 116 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGL----QNRVTGIVGSMDDLPFRNEELD 116 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTSCCCCTTCEE
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCC----CcCcEEEEcChhhCCCCCCCEE
Confidence 4578899999999999999999988 356999999999999999999888654 3569999999976655568899
Q ss_pred EEEecCCCCc-----hHHHHHhcCCCCeEEEEeecC
Q psy14962 93 AIYLSTYVPE-----IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 93 ~i~~~~~~~~-----~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+|++..++++ +++.+.++|||||++++....
T Consensus 117 ~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 117 LIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp EEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred EEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEee
Confidence 9999988765 468999999999999997643
No 24
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.70 E-value=1.1e-16 Score=119.99 Aligned_cols=107 Identities=21% Similarity=0.265 Sum_probs=89.1
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~ 91 (216)
.+.++.+|||+|||+|..+..+++..++.++|+++|+++.+++.|++++...+. ..++.++.+|+.... ...++|
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~f 94 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL----IDRVTLIKDGHQNMDKYIDCPV 94 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC----GGGEEEECSCGGGGGGTCCSCE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCeEEEECCHHHHhhhccCCc
Confidence 467899999999999999999999976667999999999999999999887552 257999999976443 234789
Q ss_pred cEEEecCCC---------------CchHHHHHhcCCCCeEEEEeecC
Q psy14962 92 DAIYLSTYV---------------PEIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 92 D~i~~~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+|+++.++ ..++..+.++|+|||++++.+..
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 999998765 13678999999999999987654
No 25
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.70 E-value=2.5e-17 Score=126.41 Aligned_cols=109 Identities=23% Similarity=0.276 Sum_probs=88.9
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.++++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++....+.......++.+...|........++||
T Consensus 27 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 27 YLQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp HCCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCcee
Confidence 3568899999999999999999987 4599999999999999999877654322223468999999886665678899
Q ss_pred EEEecCCCCc---------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVPE---------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|++...+++ +++.+.++|+|||++++.....
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 9999887643 4578889999999999986654
No 26
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.70 E-value=9.4e-17 Score=121.18 Aligned_cols=105 Identities=12% Similarity=0.012 Sum_probs=80.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCC-------CCCCCCCeEEEeccCCCCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRP-------DLLNDGRLHLRCRDGRTGLL 86 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~ 86 (216)
+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++...... ......+++++++|+.....
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~ 96 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 96 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc
Confidence 467899999999999999999987 45999999999999999887532000 00002578999999876554
Q ss_pred CC-CCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEee
Q psy14962 87 HQ-APFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 ~~-~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 121 (216)
.+ ++||+|++...+.+ ++++++++|||||++++.+
T Consensus 97 ~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 97 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 33 68999998776644 3578899999999855543
No 27
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.69 E-value=3.3e-16 Score=121.92 Aligned_cols=105 Identities=19% Similarity=0.225 Sum_probs=89.8
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...++ ..++.++.+|+.......++||
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD 116 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANC----ADRVKGITGSMDNLPFQNEELD 116 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTSCSSCTTCEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECChhhCCCCCCCEE
Confidence 457888999999999999999999853 3999999999999999999988664 2569999999976655668899
Q ss_pred EEEecCCCCc-----hHHHHHhcCCCCeEEEEeecC
Q psy14962 93 AIYLSTYVPE-----IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 93 ~i~~~~~~~~-----~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+|++...+++ +++.+.++|+|||++++....
T Consensus 117 ~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 117 LIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp EEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 9999988866 568899999999999997643
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.69 E-value=3.3e-16 Score=122.33 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=90.5
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. ..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.|++++...+ ..++.+..+|+..
T Consensus 27 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~ 96 (260)
T 1vl5_A 27 AKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNG-----HQQVEYVQGDAEQ 96 (260)
T ss_dssp HHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCC-C
T ss_pred HHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEecHHh
Confidence 45556654 4688999999999999999998873 399999999999999999988755 3579999999887
Q ss_pred CCCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeec
Q psy14962 84 GLLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 122 (216)
....+++||+|++...+++ ++.++.++|||||++++...
T Consensus 97 l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 97 MPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 6556688999999988865 56899999999999999643
No 29
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.69 E-value=6.5e-16 Score=121.85 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=84.9
Q ss_pred cCCCCCeEEEEcCCCchHHHH-HHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCV-FAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~-l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 91 (216)
.+.++.+|||+|||+|.++.. +++. ++++|+++|+++++++.|++++.+.++ .+++++++|+.... +++|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~--~ga~V~gIDis~~~l~~Ar~~~~~~gl-----~~v~~v~gDa~~l~--d~~F 189 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV--YGMRVNVVEIEPDIAELSRKVIEGLGV-----DGVNVITGDETVID--GLEF 189 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT--TCCEEEEEESSHHHHHHHHHHHHHHTC-----CSEEEEESCGGGGG--GCCC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEECchhhCC--CCCc
Confidence 478999999999999887644 4543 367999999999999999999988663 68999999987542 5789
Q ss_pred cEEEecCCCC---chHHHHHhcCCCCeEEEEeecC
Q psy14962 92 DAIYLSTYVP---EIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 92 D~i~~~~~~~---~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+|++....+ .+++++.++|||||++++...+
T Consensus 190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 9999877665 4789999999999999997644
No 30
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.69 E-value=6.9e-16 Score=113.47 Aligned_cols=112 Identities=18% Similarity=0.200 Sum_probs=89.6
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. +.++.+|||+|||+|..+..+++.. ++.+|+++|+++.+++.|++++...+. ..++ ++.+|....
T Consensus 16 ~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 16 LAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGV----SDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTC----TTSE-EEECCTTGG
T ss_pred HHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCC----CCCE-EEecchHhh
Confidence 3444443 5678899999999999999999875 457999999999999999999887553 2378 888887543
Q ss_pred CCCC-CCccEEEecCCCCc--hHHHHHhcCCCCeEEEEeecCC
Q psy14962 85 LLHQ-APFDAIYLSTYVPE--IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~~~~-~~~D~i~~~~~~~~--~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.... ++||+|++...+++ +++.+.+.|+|||++++.....
T Consensus 88 ~~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp GGGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEECSH
T ss_pred hhccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEeecc
Confidence 3322 78999999988876 8899999999999999977654
No 31
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=6.9e-16 Score=123.15 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=87.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.|+++....++ ..++.+..+|+... .++||+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~---~~~fD~ 140 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDS----PRRKEVRIQGWEEF---DEPVDR 140 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCC----SSCEEEEECCGGGC---CCCCSE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECCHHHc---CCCccE
Confidence 57889999999999999999999864 5999999999999999999888653 24799999998654 678999
Q ss_pred EEecCCCCch---------------HHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPEI---------------PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~~---------------~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...++++ +..+.++|||||++++.....
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 9998887555 578899999999999976544
No 32
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.68 E-value=7.8e-16 Score=120.90 Aligned_cols=103 Identities=23% Similarity=0.303 Sum_probs=88.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. +.+|+++|+|+.+++.++++....++ ..++.++.+|+......+++||+
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~ 132 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGL----ANRVTFSYADAMDLPFEDASFDA 132 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTSCCSCTTCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCC----CcceEEEECccccCCCCCCCccE
Confidence 5688999999999999999999875 45999999999999999999887553 35799999998876555678999
Q ss_pred EEecCCCCc------hHHHHHhcCCCCeEEEEeec
Q psy14962 94 IYLSTYVPE------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 94 i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 122 (216)
|++...+++ +++.+.++|||||++++...
T Consensus 133 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 133 VWALESLHHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp EEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 999988766 46889999999999999754
No 33
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.68 E-value=9.4e-16 Score=121.99 Aligned_cols=114 Identities=16% Similarity=0.075 Sum_probs=93.4
Q ss_pred HHHHHHhc--ccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 4 ARIIELLE--PKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 4 ~~~~~~l~--~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
..+++.+. ..+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.|+++....++ ..++.++.+|+
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~ 141 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGL----ADNITVKYGSF 141 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTC----TTTEEEEECCT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCC----CcceEEEEcCc
Confidence 34445541 1357889999999999999999998863 4999999999999999999877654 35799999999
Q ss_pred CCCCCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecC
Q psy14962 82 RTGLLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 82 ~~~~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
...+..+++||+|++...+++ ++.++.++|||||++++..+.
T Consensus 142 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 142 LEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp TSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 876656678999999988765 468999999999999997653
No 34
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=3e-16 Score=121.08 Aligned_cols=108 Identities=26% Similarity=0.313 Sum_probs=86.7
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
..+.+...+.++.+|||+|||+|..+..+++. .+++++|+++.+++.|+++....+ .++.+..+|+....
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN------RHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCGGGCC
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC------CceEEEEcChhhcC
Confidence 44444445677899999999999999988876 499999999999999999887643 57899999987554
Q ss_pred CCCCCccEEEecC-CCCc---------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 LHQAPFDAIYLST-YVPE---------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ~~~~~~D~i~~~~-~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.. ++||+|++.. .+++ +++.+.++|+|||.+++.++++
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 33 6899999875 4433 4578889999999999987765
No 35
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.67 E-value=8.2e-16 Score=116.64 Aligned_cols=100 Identities=22% Similarity=0.231 Sum_probs=79.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC---CCCCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG---LLHQAP 90 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~ 90 (216)
+.++.+|||+|||+|..+..+++..+ .++|+|+|+|+.+++.+.+.... ..++.++.+|+... ....++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~-------~~~v~~~~~d~~~~~~~~~~~~~ 126 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE-------RNNIIPLLFDASKPWKYSGIVEK 126 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH-------CSSEEEECSCTTCGGGTTTTCCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc-------CCCeEEEEcCCCCchhhcccccc
Confidence 56889999999999999999999865 56999999999988776666554 25788888887642 112368
Q ss_pred ccEEEecCCCCc----hHHHHHhcCCCCeEEEEee
Q psy14962 91 FDAIYLSTYVPE----IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 91 ~D~i~~~~~~~~----~~~~~~~~L~~gG~lv~~~ 121 (216)
||+|+++...+. ++.++.++|||||++++..
T Consensus 127 fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 127 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999999865443 3678899999999999975
No 36
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.67 E-value=1.3e-15 Score=116.80 Aligned_cols=113 Identities=21% Similarity=0.315 Sum_probs=85.0
Q ss_pred HHHHHhc-ccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 5 RIIELLE-PKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 5 ~~~~~l~-~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
.++..+. ..+++|.+|||+|||+|..+..+++.+++.++|+++|+++.++....+.... ..|+.++.+|+..
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-------r~nv~~i~~Da~~ 136 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-------RPNIFPLLADARF 136 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-------CTTEEEEECCTTC
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-------cCCeEEEEccccc
Confidence 3444443 2467999999999999999999999988788999999999987655554443 2579999999864
Q ss_pred CCC---CCCCccEEEecCCCCch----HHHHHhcCCCCeEEEEeecCC
Q psy14962 84 GLL---HQAPFDAIYLSTYVPEI----PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 84 ~~~---~~~~~D~i~~~~~~~~~----~~~~~~~L~~gG~lv~~~~~~ 124 (216)
... ..++||+|+++.+.+.. ...+.+.|||||++++++.+.
T Consensus 137 ~~~~~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisik~~ 184 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKAR 184 (232)
T ss_dssp GGGTTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred chhhhccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEEccC
Confidence 321 13589999999887553 244556999999999986543
No 37
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.67 E-value=1e-15 Score=115.96 Aligned_cols=101 Identities=23% Similarity=0.233 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++ +|||+|||+|..+..+++. ++.+++++|+++.+++.|++++...+. ..++.++.+|+.......++||+|
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~D~v 115 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANL----NDRIQIVQGDVHNIPIEDNYADLI 115 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECBTTBCSSCTTCEEEE
T ss_pred CCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccc----cCceEEEEcCHHHCCCCcccccEE
Confidence 445 9999999999999999988 456999999999999999999888653 257999999998766566889999
Q ss_pred EecCCCCc------hHHHHHhcCCCCeEEEEeec
Q psy14962 95 YLSTYVPE------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 95 ~~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 122 (216)
++...+++ +++.+.++|+|||.+++...
T Consensus 116 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 116 VSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence 99988765 56899999999999999753
No 38
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.67 E-value=1e-15 Score=122.83 Aligned_cols=105 Identities=19% Similarity=0.121 Sum_probs=89.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. +.+|+|+|+++.+++.|++++...++ ..++.++.+|+.......++||+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~fD~ 188 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRI----DDHVRSRVCNMLDTPFDKGAVTA 188 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTSCCCCTTCEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC----CCceEEEECChhcCCCCCCCEeE
Confidence 5688999999999999999999886 35999999999999999999988654 25799999999866555688999
Q ss_pred EEecCCCCc-----hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE-----IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~-----~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ ++..+.++|||||++++..+..
T Consensus 189 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 189 SWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 999877654 5688999999999999875433
No 39
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.66 E-value=2.6e-15 Score=114.06 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D 92 (216)
.++.+|||+|||+|.++..+++.. ++.+++|+|+++.+++.|++++...++ .++.++.+|+.... ...++||
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~D 113 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGV-----PNIKLLWVDGSDLTDYFEDGEID 113 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCC-----SSEEEEECCSSCGGGTSCTTCCS
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCC-----CCEEEEeCCHHHHHhhcCCCCCC
Confidence 457899999999999999999885 467999999999999999999887653 68999999987533 3456899
Q ss_pred EEEecCCCC--------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVP--------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|+++.+.+ .++..+.++|+|||.+++.+.+.
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR 159 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 999987764 36789999999999999976543
No 40
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.66 E-value=1.3e-15 Score=117.55 Aligned_cols=109 Identities=21% Similarity=0.237 Sum_probs=91.1
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. +.++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...+. .++.+..+|+...
T Consensus 12 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 12 LMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGV-----ENVRFQQGTAESL 81 (239)
T ss_dssp HHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTC-----CSEEEEECBTTBC
T ss_pred hHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCC-----CCeEEEecccccC
Confidence 3455554 6789999999999999999998873 4999999999999999999887653 5799999998766
Q ss_pred CCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecC
Q psy14962 85 LLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
...+++||+|++...+++ ++.++.++|+|||++++....
T Consensus 82 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 82 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 555678999999988755 468899999999999997543
No 41
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=3.2e-16 Score=117.88 Aligned_cols=96 Identities=17% Similarity=0.157 Sum_probs=82.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEEe
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIYL 96 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 96 (216)
+.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. .++.++.+|+.......++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH----------PSVTFHHGTITDLSDSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGGGGGSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccccccCCCCeEEEEe
Confidence 789999999999999999887 449999999999999998762 4689999998765555688999999
Q ss_pred cCCCCc--------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 97 STYVPE--------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 97 ~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
...+++ +++.+.++|+|||.+++.+....
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 109 WYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp ESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred hhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 887655 45888999999999999876664
No 42
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.66 E-value=2.4e-15 Score=117.09 Aligned_cols=106 Identities=29% Similarity=0.445 Sum_probs=91.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++.+++..+++++|+++.+++.|++++...+. .+++.+..+|+... ...++||+
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~-~~~~~~D~ 165 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF----DDRVTIKLKDIYEG-IEEENVDH 165 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC----TTTEEEECSCGGGC-CCCCSEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC----CCceEEEECchhhc-cCCCCcCE
Confidence 67899999999999999999999977778999999999999999999988764 24599999998754 34567999
Q ss_pred EEecCCCCc-hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE-IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~-~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.+... ++..+.++|+|||++++..+..
T Consensus 166 v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 166 VILDLPQPERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp EEECSSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EEECCCCHHHHHHHHHHHcCCCCEEEEEECCH
Confidence 999877654 7899999999999999987654
No 43
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.65 E-value=2.9e-16 Score=119.68 Aligned_cols=155 Identities=19% Similarity=0.139 Sum_probs=105.7
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC-
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG- 84 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~- 84 (216)
+++.+. ..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++ .++.+...|+...
T Consensus 44 ~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----------~~~~~~~~~~~~~~ 107 (227)
T 3e8s_A 44 ILLAIL--GRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-----------GAGEVHLASYAQLA 107 (227)
T ss_dssp HHHHHH--HTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-----------CSSCEEECCHHHHH
T ss_pred HHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-----------cccccchhhHHhhc
Confidence 444443 246789999999999999999887 45999999999999999876 3466777776432
Q ss_pred --C-CCCCCccEEEecCCCC-----chHHHHHhcCCCCeEEEEeecCCCCcceEEEEEecCCCceeeeeeeeeeeceecc
Q psy14962 85 --L-LHQAPFDAIYLSTYVP-----EIPYSILLQLKPGGRLVCGVGKSKSYHRMTVIDRSEDGTHFQKYEISLENFINPL 156 (216)
Q Consensus 85 --~-~~~~~~D~i~~~~~~~-----~~~~~~~~~L~~gG~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (216)
. ....+||+|++...++ .+++.+.++|+|||++++.+.++..... ..+... .....
T Consensus 108 ~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---------~~~~~~-~~~~~------ 171 (227)
T 3e8s_A 108 EAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVAD---------GDYQDG-WREES------ 171 (227)
T ss_dssp TTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCT---------TCCSCE-EEEEC------
T ss_pred ccccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCc---------cccccc-cchhh------
Confidence 2 2345699999988775 3678999999999999999887753110 000000 00000
Q ss_pred ccccccccchhhhhcccccCcceEEEeeccccccccccccCCCCchhh
Q psy14962 157 INADEQNDNWLYQQSRSEDGTHFQKYEISLENFINPLINADEQNDNWL 204 (216)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~agf~~~~~~ 204 (216)
|.... ........+.++.+++.+.|.++||++.+..
T Consensus 172 ---------~~~~~---~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 172 ---------FAGFA---GDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp ---------CTTSS---SCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred ---------hhccc---cCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 11000 0001244566789999999999999988654
No 44
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.65 E-value=4.8e-16 Score=123.90 Aligned_cols=104 Identities=20% Similarity=0.255 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+.. ...++.++.+|+..... .++||+|+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~~~~~~-~~~fD~v~ 155 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPAD--VRDRCTLVQGDMSAFAL-DKRFGTVV 155 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHH--HHTTEEEEECBTTBCCC-SCCEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccc--cccceEEEeCchhcCCc-CCCcCEEE
Confidence 4459999999999999999987 458999999999999999988763200 00479999999986544 67899998
Q ss_pred ec-CCCC--------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 96 LS-TYVP--------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 96 ~~-~~~~--------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+. ..++ .+++.+.++|+|||++++.++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 156 ISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 64 2222 356889999999999999988874
No 45
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.65 E-value=2.2e-15 Score=114.99 Aligned_cols=111 Identities=21% Similarity=0.250 Sum_probs=89.6
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+.+.+...+.++.+|||+|||+|..+..+++.. + +++++|+++.+++.|+++....+ .++.++.+|+...
T Consensus 27 ~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~ 97 (227)
T 1ve3_A 27 TLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDARKL 97 (227)
T ss_dssp HHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTTSC
T ss_pred HHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhcC------CCceEEECchhcC
Confidence 3444454456678899999999999999888873 3 99999999999999999887643 5789999998765
Q ss_pred CCCCCCccEEEecCC--CCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 85 LLHQAPFDAIYLSTY--VPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~--~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
....++||+|++..+ +.+ +++.+.++|+|||.+++..++.
T Consensus 98 ~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 98 SFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp CSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 545678999999888 433 4588899999999999987653
No 46
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.65 E-value=2.6e-15 Score=114.11 Aligned_cols=115 Identities=17% Similarity=0.131 Sum_probs=87.0
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+.+.+. ..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.|++++...++......++.++.+|+...
T Consensus 20 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 20 GVVAALK--QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 4444443 3578899999999999999999874 346999999999999999998765432100012799999998655
Q ss_pred CCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeec
Q psy14962 85 LLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 122 (216)
....++||+|++...+++ +++.+.++|||||.+++...
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 444578999999988764 45788899999997776543
No 47
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.65 E-value=5.7e-16 Score=121.00 Aligned_cols=101 Identities=26% Similarity=0.261 Sum_probs=86.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. +.+|+++|+++.+++.|+++... ..++.++.+|+.......++||+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~ 123 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSG-------NNKIIFEANDILTKEFPENNFDL 123 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCS-------CTTEEEEECCTTTCCCCTTCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhc-------CCCeEEEECccccCCCCCCcEEE
Confidence 5678899999999999999999986 45999999999999999887543 15799999999876556789999
Q ss_pred EEecCCCCch--------HHHHHhcCCCCeEEEEeecC
Q psy14962 94 IYLSTYVPEI--------PYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 94 i~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~ 123 (216)
|++...++++ ++.+.++|+|||.+++....
T Consensus 124 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 124 IYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9999888775 58899999999999997543
No 48
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.65 E-value=1.2e-15 Score=120.73 Aligned_cols=111 Identities=16% Similarity=0.282 Sum_probs=91.3
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. .+.++.+|||+|||+|..+..+++..+.+.+|+++|+++.+++.|++++...+ .++.+..+|+...
T Consensus 12 ~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~v~~~~~d~~~~ 84 (284)
T 3gu3_A 12 FLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEGDATEI 84 (284)
T ss_dssp HHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS------SEEEEEESCTTTC
T ss_pred HHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEcchhhc
Confidence 3444443 45688999999999999999999886445799999999999999999887633 4799999999865
Q ss_pred CCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecC
Q psy14962 85 LLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
.. .++||+|++...+++ +++++.++|+|||++++..++
T Consensus 85 ~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 85 EL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred Cc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 44 468999999888755 568899999999999998776
No 49
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.64 E-value=7.2e-16 Score=119.77 Aligned_cols=100 Identities=15% Similarity=0.084 Sum_probs=83.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++... ..++.++.+|+.......++||+
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~~~~fD~ 161 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG-------MPVGKFILASMETATLPPNTYDL 161 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT-------SSEEEEEESCGGGCCCCSSCEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc-------CCceEEEEccHHHCCCCCCCeEE
Confidence 3578899999999999999998885 34899999999999999987644 15789999998765555678999
Q ss_pred EEecCCCCch--------HHHHHhcCCCCeEEEEeec
Q psy14962 94 IYLSTYVPEI--------PYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 94 i~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~ 122 (216)
|++...++++ +..+.++|+|||++++..+
T Consensus 162 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999887654 5788899999999999765
No 50
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.64 E-value=4.2e-15 Score=115.75 Aligned_cols=113 Identities=25% Similarity=0.342 Sum_probs=94.7
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCCCeEEEeccCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI-RPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~ 83 (216)
.+++.+. +.++.+|||+|||+|..+..+++.++++.+|+++|+++.+++.|++++... + ..++.+..+|+..
T Consensus 87 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 87 AMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-----VENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----CCCEEEEESCGGG
T ss_pred HHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CCCEEEEECchhh
Confidence 3444443 678999999999999999999998776679999999999999999998875 4 3689999999876
Q ss_pred CCCCCCCccEEEecCCCC-chHHHHHhcCCCCeEEEEeecCC
Q psy14962 84 GLLHQAPFDAIYLSTYVP-EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.....++||+|+++.+.. .++..+.++|+|||++++.++..
T Consensus 160 ~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 160 AELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred cCCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 534456899999987655 57899999999999999988765
No 51
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.64 E-value=1.8e-15 Score=116.23 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=85.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.|++++.. ..++.++.+|+...... ++||+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~~~-~~fD~ 112 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRG-------NLKVKYIEADYSKYDFE-EKYDM 112 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCS-------CTTEEEEESCTTTCCCC-SCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhcc-------CCCEEEEeCchhccCCC-CCceE
Confidence 4678899999999999999999885 467999999999999999988654 23799999998765554 78999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ +++++.++|+|||.+++.....
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999988754 4578889999999999976554
No 52
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.64 E-value=3.7e-15 Score=117.58 Aligned_cols=114 Identities=27% Similarity=0.368 Sum_probs=94.6
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh-C-CCCCCCCCeEEEeccCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI-R-PDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-~-~~~~~~~~~~~~~~d~~ 82 (216)
.++..+. +.++.+|||+|||+|.++..+++..++..+|+++|+++.+++.|++++... + + ..++.+..+|+.
T Consensus 90 ~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~----~~~v~~~~~d~~ 163 (280)
T 1i9g_A 90 QIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP----PDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC----CTTEEEECSCGG
T ss_pred HHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC----CCcEEEEECchH
Confidence 3444443 678999999999999999999998766679999999999999999998775 3 1 267999999987
Q ss_pred CCCCCCCCccEEEecCCCC-chHHHHHhcCCCCeEEEEeecCC
Q psy14962 83 TGLLHQAPFDAIYLSTYVP-EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
......++||+|+++.+.. .++..+.++|+|||++++.+++.
T Consensus 164 ~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 164 DSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp GCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred hcCCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 6554467899999987655 57899999999999999988765
No 53
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.64 E-value=1.8e-15 Score=115.17 Aligned_cols=115 Identities=16% Similarity=0.154 Sum_probs=86.6
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+.+.+. ..++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++...++......++.++.+|+...
T Consensus 20 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 20 TVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHH--HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 3444443 2567899999999999999999874 346999999999999999998765442100012799999998655
Q ss_pred CCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeec
Q psy14962 85 LLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 122 (216)
....++||+|++...+++ +++.+.++|||||.++....
T Consensus 97 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 97 DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 545578999999888755 45678899999996665443
No 54
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.64 E-value=3.3e-15 Score=118.29 Aligned_cols=102 Identities=17% Similarity=0.077 Sum_probs=85.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...+. ..++.+..+|+.... ++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~---~~fD~ 132 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSEN----LRSKRVLLAGWEQFD---EPVDR 132 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCC----CSCEEEEESCGGGCC---CCCSE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCC----CCCeEEEECChhhCC---CCeeE
Confidence 56889999999999999999997764 4999999999999999999876543 257999999986432 68999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ +++.+.++|||||.+++.....
T Consensus 133 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 133 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred EEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 999877654 3578899999999999976544
No 55
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.64 E-value=9.5e-16 Score=116.91 Aligned_cols=104 Identities=16% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC---CCCCCCcc
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG---LLHQAPFD 92 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~D 92 (216)
++.+|||||||+|..+..+++.. ++..|+|+|+++.+++.|++++...+ ..|+.++.+|+... ....++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~-----l~nv~~~~~Da~~~l~~~~~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEG-----LSNLRVMCHDAVEVLHKMIPDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTT-----CSSEEEECSCHHHHHHHHSCTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhC-----CCcEEEEECCHHHHHHHHcCCCChh
Confidence 57899999999999999999874 56799999999999999999988765 36899999997643 13467899
Q ss_pred EEEecCCCC--------------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 93 AIYLSTYVP--------------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 93 ~i~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
.|++..+.+ .++..+.++|||||++++.+....
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 999984432 267899999999999999886653
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.64 E-value=2.6e-15 Score=118.12 Aligned_cols=105 Identities=22% Similarity=0.272 Sum_probs=90.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++.. ++.+++++|+++.+++.+++++...+ ..++.++..|........++||+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~ 108 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNG-----IKNVKFLQANIFSLPFEDSSFDH 108 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCGGGCCSCTTCEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCCcEEEEcccccCCCCCCCeeE
Confidence 4688999999999999999999884 46799999999999999999988755 36799999998866656789999
Q ss_pred EEecCCCCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ ++..+.++|+|||++++..+..
T Consensus 109 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 109 IFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred EEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999988755 5688999999999999977554
No 57
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=3e-15 Score=111.45 Aligned_cols=104 Identities=16% Similarity=0.073 Sum_probs=84.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D 92 (216)
.++.+|||+|||+|.++..++.. ...+|+++|+++.+++.|++++...+. .+++++++|+.... ...++||
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~fD 115 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGL-----SGATLRRGAVAAVVAAGTTSPVD 115 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTC-----SCEEEEESCHHHHHHHCCSSCCS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEccHHHHHhhccCCCcc
Confidence 47889999999999999988775 234899999999999999999988652 68999999986432 1256899
Q ss_pred EEEecCCCCc-------hHHHHHh--cCCCCeEEEEeecCCC
Q psy14962 93 AIYLSTYVPE-------IPYSILL--QLKPGGRLVCGVGKSK 125 (216)
Q Consensus 93 ~i~~~~~~~~-------~~~~~~~--~L~~gG~lv~~~~~~~ 125 (216)
+|+++.++.. .+..+.+ +|+|||.+++......
T Consensus 116 ~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 116 LVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred EEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 9999988765 3467777 9999999999776543
No 58
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.64 E-value=2.7e-15 Score=113.16 Aligned_cols=113 Identities=19% Similarity=0.139 Sum_probs=88.4
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. ...++.+|||+|||+|..+..++... +.+|+++|+|+.+++.+++++...+ .++.+..+|+..
T Consensus 12 ~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~ 82 (209)
T 2p8j_A 12 YRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN------FKLNISKGDIRK 82 (209)
T ss_dssp HHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT------CCCCEEECCTTS
T ss_pred HHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC------CceEEEECchhh
Confidence 34445444 45678999999999999855444442 4599999999999999999887654 568899999876
Q ss_pred CCCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 84 GLLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
.....++||+|++...+++ +++.+.++|+|||.+++...+..
T Consensus 83 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 83 LPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp CCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred CCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 5555678999999877655 34788899999999999876653
No 59
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.64 E-value=1.7e-15 Score=117.99 Aligned_cols=104 Identities=19% Similarity=0.123 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHH----------hCCC--CCCCCCeEEEeccCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMR----------IRPD--LLNDGRLHLRCRDGR 82 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~----------~~~~--~~~~~~~~~~~~d~~ 82 (216)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++... .+.. .....+++++++|+.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 47889999999999999999987 45999999999999999766421 0000 001257999999997
Q ss_pred CCCCCC-CCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEee
Q psy14962 83 TGLLHQ-APFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 83 ~~~~~~-~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 121 (216)
...... ++||+|++...+.+ ++..+.++|||||++++.+
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 655433 78999998766543 4578899999999997543
No 60
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.63 E-value=3.5e-15 Score=118.91 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCCCeEEEeccCCCCCCCC-----
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI-RPDLLNDGRLHLRCRDGRTGLLHQ----- 88 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~----- 88 (216)
.++.+|||+|||+|..+..+++...+..+|+|+|+|+.+++.|++++... + ...++.++++|+.......
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~v~~~~~d~~~~~~~~~~~~~ 110 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD----TYKNVSFKISSSDDFKFLGADSVD 110 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-----CCTTEEEEECCTTCCGGGCTTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC----CCCceEEEEcCHHhCCcccccccc
Confidence 57899999999999999999986545679999999999999999998774 1 1368999999998655444
Q ss_pred -CCccEEEecCCCCc-----hHHHHHhcCCCCeEEEEee
Q psy14962 89 -APFDAIYLSTYVPE-----IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 89 -~~~D~i~~~~~~~~-----~~~~~~~~L~~gG~lv~~~ 121 (216)
++||+|++...+++ ++.++.++|+|||.+++..
T Consensus 111 ~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 111 KQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence 78999999988755 5688999999999998843
No 61
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.63 E-value=1.8e-15 Score=114.46 Aligned_cols=112 Identities=19% Similarity=0.195 Sum_probs=90.1
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+.+.+...+.++.+|||+|||+|..+..+++.. + .+++++|+++.+++.++++... ..++.++.+|+...
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLGG-F-PNVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDVRKL 101 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTT-C-CCEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCTTSC
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcC-C-CcEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcchhcC
Confidence 4556666667889999999999999999998873 2 2899999999999999987653 25789999998765
Q ss_pred CCCCCCccEEEecCCC---------------------CchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 85 LLHQAPFDAIYLSTYV---------------------PEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~---------------------~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
....++||+|++..++ ..++..+.++|+|||.+++..+...
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 5556789999987654 2356788899999999999887663
No 62
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.63 E-value=4.6e-15 Score=113.71 Aligned_cols=104 Identities=20% Similarity=0.284 Sum_probs=85.7
Q ss_pred cCCCCCeEEEEcCC-CchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC-CCCCCC
Q psy14962 13 KIQEGAKVLDIGSG-SGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG-LLHQAP 90 (216)
Q Consensus 13 ~~~~~~~vldiG~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~ 90 (216)
.+.++.+|||+||| +|..+..+++.. +.+|+++|+++.+++.|++++...+ .++.++.+|+... ...+++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~ 123 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNN------SNVRLVKSNGGIIKGVVEGT 123 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTT------CCCEEEECSSCSSTTTCCSC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhC------CCcEEEeCCchhhhhcccCc
Confidence 45789999999999 999999999886 4599999999999999999998854 2789999996422 223478
Q ss_pred ccEEEecCCC-------------------------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 91 FDAIYLSTYV-------------------------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 91 ~D~i~~~~~~-------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
||+|+++.++ ..+++.+.++|+|||++++.+++.
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 182 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK 182 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc
Confidence 9999998775 235688889999999999976554
No 63
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.63 E-value=3.6e-15 Score=113.32 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D 92 (216)
.++.+|||+|||+|.++..+++.. ++.+++|+|+++.+++.|++++...+ ..++.++.+|+.... ...++||
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~-----~~nv~~~~~d~~~l~~~~~~~~~d 110 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSE-----AQNVKLLNIDADTLTDVFEPGEVK 110 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSC-----CSSEEEECCCGGGHHHHCCTTSCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhhcCcCCcC
Confidence 357899999999999999999884 56799999999999999999988755 368999999986532 3456899
Q ss_pred EEEecCCCC--------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVP--------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.|++..+.+ .++..+.++|+|||.+++.+.+.
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~ 156 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR 156 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 998875532 35788999999999999987544
No 64
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.63 E-value=2e-15 Score=114.59 Aligned_cols=100 Identities=20% Similarity=0.203 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++... ..++.++.+|+.... ..++||+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~~d~~~~~-~~~~fD~ 117 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKR-------WSHISWAATDILQFS-TAELFDL 117 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTT-------CSSEEEEECCTTTCC-CSCCEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhccc-------CCCeEEEEcchhhCC-CCCCccE
Confidence 456789999999999999999887 35999999999999999988755 247999999987665 4678999
Q ss_pred EEecCCCCc---------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE---------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ ++..+.++|+|||.+++.++..
T Consensus 118 v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 118 IVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999887754 3578889999999999976544
No 65
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.63 E-value=9.4e-16 Score=117.19 Aligned_cols=102 Identities=10% Similarity=0.098 Sum_probs=84.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--CCCCccEE
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--HQAPFDAI 94 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~D~i 94 (216)
+.+|||+|||+|+.+..+++.++++++|+++|+++++++.|++++...++ ...+++++.+|+..... ..++||+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~---~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY---SPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC---CGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 44999999999999999999876678999999999999999999988663 11479999998754322 25789999
Q ss_pred EecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 95 YLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 95 ~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
+++..... +++.+.++|+|||++++..
T Consensus 134 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 134 FGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp EECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred EEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 99877654 5688899999999999853
No 66
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.63 E-value=3.6e-15 Score=116.27 Aligned_cols=107 Identities=18% Similarity=0.203 Sum_probs=87.3
Q ss_pred HHHHHh---cccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 5 RIIELL---EPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 5 ~~~~~l---~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
.+++.+ ...+.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++ ... ..++.+..+|+
T Consensus 25 ~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~-----~~~~~~~~~d~ 95 (263)
T 2yqz_A 25 QIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGV-----DRKVQVVQADA 95 (263)
T ss_dssp HHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTS-----CTTEEEEESCT
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hcc-----CCceEEEEccc
Confidence 344444 334678899999999999999999887 359999999999999999886 211 36799999998
Q ss_pred CCCCCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEe
Q psy14962 82 RTGLLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 82 ~~~~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~ 120 (216)
......+++||+|++...+++ ++.++.++|+|||.+++.
T Consensus 96 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 96 RAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 765555678999999988765 458889999999999986
No 67
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.62 E-value=1.3e-15 Score=117.68 Aligned_cols=108 Identities=18% Similarity=0.174 Sum_probs=87.9
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+.. ..++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++.. .++.++.+|+..
T Consensus 31 ~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~---------~~v~~~~~d~~~ 97 (250)
T 2p7i_A 31 PFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLK---------DGITYIHSRFED 97 (250)
T ss_dssp HHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSC---------SCEEEEESCGGG
T ss_pred HHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhh---------CCeEEEEccHHH
Confidence 445566653 346789999999999999999876 2389999999999999987642 268999999876
Q ss_pred CCCCCCCccEEEecCCCCc------hHHHHH-hcCCCCeEEEEeecCCC
Q psy14962 84 GLLHQAPFDAIYLSTYVPE------IPYSIL-LQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~------~~~~~~-~~L~~gG~lv~~~~~~~ 125 (216)
. ..+++||+|++...+++ +++++. ++|||||++++.+++..
T Consensus 98 ~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 98 A-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp C-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred c-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 5 34678999999988865 568999 99999999999887664
No 68
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.62 E-value=8.1e-15 Score=110.07 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=85.0
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.++ +|||+|||+|..+..+++. +.+++++|+++.+++.|+++....+ .++.+..+|+.......++||
T Consensus 27 ~~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~~~~~fD 96 (202)
T 2kw5_A 27 QIPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKG------VKITTVQSNLADFDIVADAWE 96 (202)
T ss_dssp HSCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHT------CCEEEECCBTTTBSCCTTTCS
T ss_pred hCCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcC------CceEEEEcChhhcCCCcCCcc
Confidence 35677 9999999999999998876 4599999999999999999987754 378999999876555567899
Q ss_pred EEEecCCCC------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 93 AIYLSTYVP------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 93 ~i~~~~~~~------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+|++..... .++..+.++|+|||.+++......
T Consensus 97 ~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 97 GIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp EEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred EEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 999864332 256888999999999999887765
No 69
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.62 E-value=5.6e-15 Score=113.59 Aligned_cols=105 Identities=24% Similarity=0.239 Sum_probs=82.7
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
+.+.+.....++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++. .++.++.+|+....
T Consensus 30 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~ 96 (239)
T 3bxo_A 30 IADLVRSRTPEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL----------PDATLHQGDMRDFR 96 (239)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC----------TTCEEEECCTTTCC
T ss_pred HHHHHHHhcCCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC----------CCCEEEECCHHHcc
Confidence 344444444678899999999999999999884 28999999999999998763 45889999987654
Q ss_pred CCCCCccEEEecC-CCCc---------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 LHQAPFDAIYLST-YVPE---------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ~~~~~~D~i~~~~-~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
. .++||+|++.. .+++ +++.+.++|+|||.+++..+..
T Consensus 97 ~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 97 L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 4 56899999543 4433 4578889999999999986544
No 70
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.62 E-value=7.7e-15 Score=118.88 Aligned_cols=119 Identities=26% Similarity=0.334 Sum_probs=91.4
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhC----CCCC--CCCCeEEE
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIR----PDLL--NDGRLHLR 77 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~~~--~~~~~~~~ 77 (216)
+.+++.+. +.++.+|||+|||+|.++..+++..++..+|+++|+++.+++.|++++...+ +... ...++.+.
T Consensus 95 ~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 95 NMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 44555553 6789999999999999999999987666799999999999999999887532 0000 02579999
Q ss_pred eccCCCCC--CCCCCccEEEecCCCCc-hHHHHHhcCCCCeEEEEeecCC
Q psy14962 78 CRDGRTGL--LHQAPFDAIYLSTYVPE-IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 78 ~~d~~~~~--~~~~~~D~i~~~~~~~~-~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.+|+.... ...++||+|+++.+.++ ++..+.++|+|||.+++..+..
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp ESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred ECChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 99987643 23467999999877665 5799999999999999877654
No 71
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=4.6e-15 Score=115.26 Aligned_cols=105 Identities=20% Similarity=0.277 Sum_probs=86.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---CCCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL---LHQAP 90 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~ 90 (216)
..++.+|||+|||+|..+..+++.++++++|+++|+++.+++.|++++...++ ..++.++.+|+.... ...++
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV----DQRVTLREGPALQSLESLGECPA 136 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHTCCSCCC
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHhcCCCCC
Confidence 45788999999999999999999875467999999999999999999988664 257999999975321 12358
Q ss_pred ccEEEecCCCCc---hHHHHHhcCCCCeEEEEeec
Q psy14962 91 FDAIYLSTYVPE---IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 91 ~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~ 122 (216)
||+|+++..... +++.+.++|||||++++...
T Consensus 137 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 137 FDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred eEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 999999887654 56888999999999988643
No 72
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.62 E-value=5.2e-15 Score=121.63 Aligned_cols=101 Identities=22% Similarity=0.237 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++...+ .+++++.+|+.......++||+|
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~------~~v~~~~~D~~~~~~~~~~fD~I 302 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANA------LKAQALHSDVDEALTEEARFDII 302 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTT------CCCEEEECSTTTTSCTTCCEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcC------CCeEEEEcchhhccccCCCeEEE
Confidence 36889999999999999999987 4599999999999999999998865 34899999988665555789999
Q ss_pred EecCCCCc-----------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 95 YLSTYVPE-----------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 95 ~~~~~~~~-----------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+++.++++ ++..+.++|+|||.+++.+...
T Consensus 303 i~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 303 VTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp EECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred EECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 99988764 4578889999999999987654
No 73
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.62 E-value=1e-14 Score=108.36 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=90.2
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCC--eEEEeccC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGR--LHLRCRDG 81 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~d~ 81 (216)
..+++.+. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+. .+ +.++.+|+
T Consensus 42 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~d~ 111 (194)
T 1dus_A 42 KILVENVV--VDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNL-----DNYDIRVVHSDL 111 (194)
T ss_dssp HHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTC-----TTSCEEEEECST
T ss_pred HHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECch
Confidence 34455553 457889999999999999999887 45999999999999999999887553 44 99999998
Q ss_pred CCCCCCCCCccEEEecCCCCc-------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 82 RTGLLHQAPFDAIYLSTYVPE-------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 82 ~~~~~~~~~~D~i~~~~~~~~-------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
.... ..++||+|+++.++++ +++.+.++|+|||.+++.+++..
T Consensus 112 ~~~~-~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 112 YENV-KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp TTTC-TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred hccc-ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 7643 3568999999988653 45788899999999999887763
No 74
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.62 E-value=7.9e-15 Score=109.60 Aligned_cols=107 Identities=19% Similarity=0.148 Sum_probs=86.7
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...+. .++.+..+|+...
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~ 92 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL-----DNLHTRVVDLNNL 92 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECCGGGC
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC-----CCcEEEEcchhhC
Confidence 3444443 346789999999999999999987 45999999999999999999877652 4799999998765
Q ss_pred CCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeec
Q psy14962 85 LLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 122 (216)
.. .++||+|++...+++ +++.+.++|+|||.+++...
T Consensus 93 ~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 93 TF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 44 678999999887654 45788999999999877554
No 75
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.62 E-value=5.9e-15 Score=116.33 Aligned_cols=105 Identities=20% Similarity=0.251 Sum_probs=89.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI-RPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
+.++.+|||+|||+|..+..+++...++.+|+++|+++.+++.|++++... + ..++.+..+|+... ..+++||
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~~~-~~~~~fD 181 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-----IGNVRTSRSDIADF-ISDQMYD 181 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-----CTTEEEECSCTTTC-CCSCCEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCcEEEEECchhcc-CcCCCcc
Confidence 578899999999999999999998656679999999999999999998774 4 36899999998763 3456899
Q ss_pred EEEecCCCC-chHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVP-EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|+++.+-. .+++.+.++|+|||++++.++..
T Consensus 182 ~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 182 AVIADIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp EEEECCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred EEEEcCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 999976654 47899999999999999988765
No 76
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.62 E-value=2.3e-15 Score=114.61 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=87.6
Q ss_pred hcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCC
Q psy14962 10 LEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQA 89 (216)
Q Consensus 10 l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (216)
+...+++|.+|+|+|||+|++++.+++. ++..+|+++|+++.+++.|++++..+++ .+++.+..+|........+
T Consensus 9 l~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl----~~~i~~~~~d~l~~l~~~~ 83 (225)
T 3kr9_A 9 VASFVSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGL----KEKIQVRLANGLAAFEETD 83 (225)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCCGGG
T ss_pred HHHhCCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEECchhhhcccCc
Confidence 3345778999999999999999999987 4556899999999999999999999775 2579999999865444333
Q ss_pred CccEEEecCCC----CchHHHHHhcCCCCeEEEEeecC
Q psy14962 90 PFDAIYLSTYV----PEIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 90 ~~D~i~~~~~~----~~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+||+|++...- ..++......|+++|+++++-..
T Consensus 84 ~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 84 QVSVITIAGMGGRLIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp CCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred CCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 69988865442 44667788899999999997653
No 77
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.61 E-value=8.7e-15 Score=111.28 Aligned_cols=105 Identities=20% Similarity=0.151 Sum_probs=86.1
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++.. .++.++.+|+...
T Consensus 36 ~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~~ 101 (220)
T 3hnr_A 36 DILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLSF 101 (220)
T ss_dssp HHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSSC
T ss_pred HHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhhc
Confidence 4555554 357889999999999999999987 4599999999999999987642 3688999998866
Q ss_pred CCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 85 LLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
... ++||+|++...+++ +++.+.++|||||.+++..+..
T Consensus 102 ~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 102 EVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp CCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred CCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 554 78999999988865 5678889999999999976443
No 78
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.61 E-value=1.2e-15 Score=121.26 Aligned_cols=113 Identities=19% Similarity=0.251 Sum_probs=84.6
Q ss_pred hcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCC----------------------
Q psy14962 10 LEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPD---------------------- 67 (216)
Q Consensus 10 l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~---------------------- 67 (216)
+.....++.+|||+|||+|..+..+++.++ ..+|+|+|+++.+++.|++++...+..
T Consensus 40 l~~~~~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (292)
T 3g07_A 40 LKPEWFRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTT 118 (292)
T ss_dssp SCGGGTTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----------------------------
T ss_pred hhhhhcCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccc
Confidence 333344688999999999999999999864 469999999999999999876543210
Q ss_pred -------------------------------CCCCCCeEEEeccCCCCC-----CCCCCccEEEecCCCCc---------
Q psy14962 68 -------------------------------LLNDGRLHLRCRDGRTGL-----LHQAPFDAIYLSTYVPE--------- 102 (216)
Q Consensus 68 -------------------------------~~~~~~~~~~~~d~~~~~-----~~~~~~D~i~~~~~~~~--------- 102 (216)
...+.++.++.+|+.... ...++||+|++...+.+
T Consensus 119 ~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~ 198 (292)
T 3g07_A 119 TVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEG 198 (292)
T ss_dssp -----------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHH
T ss_pred cccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHH
Confidence 001157999999987443 24578999999988633
Q ss_pred ---hHHHHHhcCCCCeEEEEeecC
Q psy14962 103 ---IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 103 ---~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+++.+.++|+|||+|++....
T Consensus 199 ~~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 199 LKRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHhCCCcEEEEecCC
Confidence 468889999999999996443
No 79
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.61 E-value=2.5e-15 Score=114.70 Aligned_cols=111 Identities=16% Similarity=0.243 Sum_probs=89.7
Q ss_pred HhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCC
Q psy14962 9 LLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQ 88 (216)
Q Consensus 9 ~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (216)
.+...+.+|.+|+|+|||+|++++.+++. ++..+|+++|+++.+++.|++++..+++ .+++.+..+|......+.
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl----~~~I~~~~gD~l~~~~~~ 88 (230)
T 3lec_A 14 KVANYVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGL----TSKIDVRLANGLSAFEEA 88 (230)
T ss_dssp HHHTTSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCCGG
T ss_pred HHHHhCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECchhhccccc
Confidence 34446788999999999999999999987 4456899999999999999999998775 357999999987665544
Q ss_pred CCccEEEecCCC----CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 89 APFDAIYLSTYV----PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 89 ~~~D~i~~~~~~----~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
++||+|++...- ..++......|+++|+|+++-...
T Consensus 89 ~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~~~ 128 (230)
T 3lec_A 89 DNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPNNR 128 (230)
T ss_dssp GCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred cccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECCCC
Confidence 479998765543 345677778999999999976543
No 80
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.61 E-value=9.2e-16 Score=122.66 Aligned_cols=110 Identities=16% Similarity=0.124 Sum_probs=89.6
Q ss_pred hcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCC
Q psy14962 10 LEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQA 89 (216)
Q Consensus 10 l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (216)
+...+.++.+|||+|||+|..+..++....++.+|+++|+++.+++.|++++...+. ..++.++.+|+...... +
T Consensus 112 l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~-~ 186 (305)
T 3ocj_A 112 LQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL----AGQITLHRQDAWKLDTR-E 186 (305)
T ss_dssp HHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT----GGGEEEEECCGGGCCCC-S
T ss_pred HHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECchhcCCcc-C
Confidence 334567899999999999999998863334567999999999999999999876543 24599999998865544 8
Q ss_pred CccEEEecCCCCc---------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 90 PFDAIYLSTYVPE---------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 90 ~~D~i~~~~~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+||+|++..++++ +++.+.++|||||++++.....
T Consensus 187 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 187 GYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp CEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred CeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 8999999887754 3688899999999999976554
No 81
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.61 E-value=1e-14 Score=117.10 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=85.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.|+++....++ ..++.+..+|+.... ++||+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~---~~fD~ 158 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDT----NRSRQVLLQGWEDFA---EPVDR 158 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCC----SSCEEEEESCGGGCC---CCCSE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECChHHCC---CCcCE
Confidence 46889999999999999999998863 4999999999999999999887553 256899999976542 67999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
|++...+++ +++.+.++|+|||++++..+...
T Consensus 159 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 159 IVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp EEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred EEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 999877654 45788899999999999766553
No 82
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.61 E-value=1e-14 Score=114.97 Aligned_cols=106 Identities=29% Similarity=0.448 Sum_probs=90.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++.+++..+|+++|+++.+++.|++++...++ ..++.+..+|+... ...++||+
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~-~~~~~~D~ 184 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL----IERVTIKVRDISEG-FDEKDVDA 184 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC----GGGEEEECCCGGGC-CSCCSEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC----CCCEEEEECCHHHc-ccCCccCE
Confidence 57889999999999999999999866667999999999999999999887542 25789999998755 33468999
Q ss_pred EEecCCCC-chHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVP-EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.+.. .++..+.++|+|||.+++.++..
T Consensus 185 V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 185 LFLDVPDPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp EEECCSCGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred EEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 99987765 57899999999999999987754
No 83
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=5.9e-15 Score=114.89 Aligned_cols=99 Identities=16% Similarity=0.202 Sum_probs=84.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.++++. .++.+..+|+.... ..++||+
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~-~~~~fD~ 98 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLATWK-PAQKADL 98 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTTCC-CSSCEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhhcC-ccCCcCE
Confidence 4578899999999999999999886 4569999999999999998761 57899999987655 5678999
Q ss_pred EEecCCCCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ ++.++.++|+|||++++.++..
T Consensus 99 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 99 LYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp EEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred EEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 999988765 4578899999999999987654
No 84
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.61 E-value=4.1e-15 Score=122.59 Aligned_cols=107 Identities=24% Similarity=0.241 Sum_probs=88.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh-----CCCCCCCCCeEEEeccCCCC----
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI-----RPDLLNDGRLHLRCRDGRTG---- 84 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~d~~~~---- 84 (216)
+.++.+|||+|||+|..+..+++..+++.+|+++|+++.+++.|++++... |. +...++.++.+|+...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~--~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGS--PSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSS--TTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccc--cCCCceEEEEccHHHhhhcc
Confidence 457899999999999999999998866779999999999999999987653 20 1125899999998754
Q ss_pred --CCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeec
Q psy14962 85 --LLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 85 --~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 122 (216)
...+++||+|+++..+++ ++.++.++|||||++++...
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 445678999999988765 56899999999999999754
No 85
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.61 E-value=1e-14 Score=118.99 Aligned_cols=106 Identities=22% Similarity=0.178 Sum_probs=90.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|.++..++...++...++|+|+++.+++.|++++...++ .++++..+|+.......+.||+
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~-----~~i~~~~~D~~~~~~~~~~~D~ 275 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL-----SWIRFLRADARHLPRFFPEVDR 275 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC-----TTCEEEECCGGGGGGTCCCCSE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC-----CceEEEeCChhhCccccCCCCE
Confidence 56788999999999999999999864557999999999999999999988663 4799999998865544566899
Q ss_pred EEecCCCCc--------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE--------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~--------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.++.. ++..+.++|+|||.+++.++++
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 999888632 4567889999999999988766
No 86
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=5.2e-15 Score=116.87 Aligned_cols=105 Identities=18% Similarity=0.082 Sum_probs=88.3
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.++.+|||+|||+|.++..+++... . +|+++|+++.+++.|++++..+++ ..++.++++|+..... .++||
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~----~~~v~~~~~D~~~~~~-~~~fD 194 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFPG-ENIAD 194 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCCC-CSCEE
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCC----CceEEEEECCHHHhcc-cCCcc
Confidence 356799999999999999999999843 2 799999999999999999988664 2458999999876654 67899
Q ss_pred EEEecCCCC--chHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVP--EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~--~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|+++.+.. .++..+.++|+|||.+++....+
T Consensus 195 ~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 195 RILMGYVVRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEECCchhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 999987754 47789999999999999976543
No 87
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=4.8e-15 Score=111.69 Aligned_cols=111 Identities=16% Similarity=0.136 Sum_probs=88.6
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+...+.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...+. .++.+..+|+...
T Consensus 49 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~ 121 (205)
T 3grz_A 49 LAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGI-----YDIALQKTSLLAD 121 (205)
T ss_dssp HHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTC-----CCCEEEESSTTTT
T ss_pred HHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEecccccc
Confidence 344555444678899999999999999998875 245999999999999999999887653 4589999998654
Q ss_pred CCCCCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEeecCC
Q psy14962 85 LLHQAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
. .++||+|+++.+.+. +++.+.++|+|||++++.....
T Consensus 122 ~--~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 122 V--DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp C--CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred C--CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecCc
Confidence 3 468999999988765 3577789999999999964433
No 88
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.60 E-value=1.5e-16 Score=126.31 Aligned_cols=106 Identities=20% Similarity=0.139 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---CCCCCc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL---LHQAPF 91 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~ 91 (216)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|+++....+.. ....++.+..+|+.... ...++|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~f 131 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKE-PAFDKWVIEEANWLTLDKDVPAGDGF 131 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTS-HHHHTCEEEECCGGGHHHHSCCTTCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccc-cccceeeEeecChhhCccccccCCCe
Confidence 56789999999999999999987 349999999999999999876432210 00145778888876543 356789
Q ss_pred cEEEec-CCCCc-------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLS-TYVPE-------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~-~~~~~-------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+|++. ..+++ +++++.++|||||++++.+++.
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 999997 55432 4578899999999999987654
No 89
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.60 E-value=6.1e-15 Score=113.73 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=87.8
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+.+.+.....++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+ .++.++.+|+...
T Consensus 26 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 26 FIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQG------LKPRLACQDISNL 96 (246)
T ss_dssp HHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTT------CCCEEECCCGGGC
T ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcC------CCeEEEecccccC
Confidence 344444432347789999999999999999887 3599999999999999999887643 3789999998765
Q ss_pred CCCCCCccEEEecC-CCCch---------HHHHHhcCCCCeEEEEeecCC
Q psy14962 85 LLHQAPFDAIYLST-YVPEI---------PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~~~~~~~D~i~~~~-~~~~~---------~~~~~~~L~~gG~lv~~~~~~ 124 (216)
... ++||+|++.. .++++ ++.+.++|+|||.+++.++++
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred Ccc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 443 7899999987 66543 478889999999999987765
No 90
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.60 E-value=3.2e-15 Score=112.57 Aligned_cols=105 Identities=16% Similarity=0.143 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--CCCC-cc
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--HQAP-FD 92 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~-~D 92 (216)
++.+|||+|||+|.++..++... ..+|+++|+|+.+++.|++++...+. ...++.++.+|+..... ..++ ||
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD 127 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKC---SSEQAEVINQSSLDFLKQPQNQPHFD 127 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC---CTTTEEEECSCHHHHTTSCCSSCCEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCC---CccceEEEECCHHHHHHhhccCCCCC
Confidence 67899999999999999877662 24899999999999999999987552 01579999999764322 2467 99
Q ss_pred EEEecCCCC-----chHHHH--HhcCCCCeEEEEeecCCC
Q psy14962 93 AIYLSTYVP-----EIPYSI--LLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 93 ~i~~~~~~~-----~~~~~~--~~~L~~gG~lv~~~~~~~ 125 (216)
+|+++.++. ..+..+ .++|+|||.+++.+....
T Consensus 128 ~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 128 VVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp EEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred EEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 999998853 244556 567999999999876653
No 91
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.60 E-value=1.2e-14 Score=114.31 Aligned_cols=114 Identities=22% Similarity=0.314 Sum_probs=87.8
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHH------HHHHHHHHHHHhCCCCCCCCCeEEEe
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMRE------QCEDAWETVMRIRPDLLNDGRLHLRC 78 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~------~~~~a~~~~~~~~~~~~~~~~~~~~~ 78 (216)
.+++.+. +.++.+|||+|||+|..+..+++..++..+|+++|+++. +++.|++++...++ ..++.+..
T Consensus 34 ~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~----~~~v~~~~ 107 (275)
T 3bkx_A 34 AIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL----GDRLTVHF 107 (275)
T ss_dssp HHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT----GGGEEEEC
T ss_pred HHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC----CCceEEEE
Confidence 3444443 578899999999999999999998766579999999997 99999999876442 25799999
Q ss_pred cc-CC--CCCCCCCCccEEEecCCCCch------HHHHHhcCCCCeEEEEeecCC
Q psy14962 79 RD-GR--TGLLHQAPFDAIYLSTYVPEI------PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 79 ~d-~~--~~~~~~~~~D~i~~~~~~~~~------~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+| .. ......++||+|++..+++++ .+.+.++++|||++++.....
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 98 32 222245789999999887653 355667777799999976554
No 92
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.60 E-value=6.3e-16 Score=121.13 Aligned_cols=106 Identities=18% Similarity=0.121 Sum_probs=76.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCC-----------------------
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLN----------------------- 70 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~----------------------- 70 (216)
..++.+|||+|||+|..+..++... ..+|+|+|+|+.|++.|++++...... ..
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~-~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGA-YDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTC-CCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCc-ccchHHHHHHHhcCCCCcchhhHHH
Confidence 4578899999999998877665541 137999999999999999876542100 00
Q ss_pred --CCCeE-EEeccCCCCCC----CCCCccEEEecCCCCc----------hHHHHHhcCCCCeEEEEeec
Q psy14962 71 --DGRLH-LRCRDGRTGLL----HQAPFDAIYLSTYVPE----------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 71 --~~~~~-~~~~d~~~~~~----~~~~~D~i~~~~~~~~----------~~~~~~~~L~~gG~lv~~~~ 122 (216)
..++. ++.+|+....+ ..++||+|++...+++ ++.+++++|||||+|++...
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 01233 88889875321 2468999999887654 35788899999999999753
No 93
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.60 E-value=3.9e-15 Score=113.63 Aligned_cols=104 Identities=22% Similarity=0.313 Sum_probs=84.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC-----C
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH-----Q 88 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~ 88 (216)
..++.+|||+|||+|..+..+++..+++++|+++|+++.+++.|++++...+. ..++.++.+|+...... .
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~ 131 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL----NDRVEVRTGLALDSLQQIENEKY 131 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHHHHHTTC
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHHHHhcCC
Confidence 35788999999999999999999875467999999999999999999988664 25699999997532211 1
Q ss_pred CCccEEEecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 89 APFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 89 ~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
++||+|+++..... +++.+.++|+|||++++..
T Consensus 132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 132 EPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred CCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 57999999887654 5688899999999888853
No 94
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.60 E-value=4e-15 Score=114.44 Aligned_cols=112 Identities=15% Similarity=0.174 Sum_probs=89.6
Q ss_pred HHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC
Q psy14962 8 ELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH 87 (216)
Q Consensus 8 ~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (216)
+.+...+.++.+|||+|||+|++++.+++. ++..+|+++|+++.+++.|++++..+++ .+++.+..+|......+
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl----~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 13 EKVASYITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGL----TEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp HHHHTTCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCCG
T ss_pred HHHHHhCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEecchhhccCc
Confidence 344456788999999999999999999987 4456899999999999999999998775 25699999998765544
Q ss_pred CCCccEEEecCCC----CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 88 QAPFDAIYLSTYV----PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 88 ~~~~D~i~~~~~~----~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
..+||+|++...- ..++......|+++++|+++-...
T Consensus 88 ~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~~~ 128 (244)
T 3gnl_A 88 KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPNIA 128 (244)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 4469998865443 445677788999999999986543
No 95
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.60 E-value=4.9e-15 Score=109.01 Aligned_cols=117 Identities=18% Similarity=0.245 Sum_probs=89.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
...+++.+.. ..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...++ ..++.++.+|+.
T Consensus 19 ~~~~~~~l~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~ 91 (177)
T 2esr_A 19 RGAIFNMIGP-YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKA----ENRFTLLKMEAE 91 (177)
T ss_dssp HHHHHHHHCS-CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTC----GGGEEEECSCHH
T ss_pred HHHHHHHHHh-hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECcHH
Confidence 4455555542 457889999999999999999887 235999999999999999999887543 246899999976
Q ss_pred CCC-CCCCCccEEEecCCCC-----chHHHHH--hcCCCCeEEEEeecCCCC
Q psy14962 83 TGL-LHQAPFDAIYLSTYVP-----EIPYSIL--LQLKPGGRLVCGVGKSKS 126 (216)
Q Consensus 83 ~~~-~~~~~~D~i~~~~~~~-----~~~~~~~--~~L~~gG~lv~~~~~~~~ 126 (216)
... ...+.||+|+++.++. ..+..+. ++|+|||.+++.+.....
T Consensus 92 ~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 92 RAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 421 1235699999998763 2445665 899999999998877653
No 96
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.60 E-value=1.2e-14 Score=111.69 Aligned_cols=102 Identities=25% Similarity=0.383 Sum_probs=83.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---CCCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL---LHQAP 90 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~ 90 (216)
+.++.+|||+|||+|.++..+++..++..+|+++|+++.+++.+.+.... ..++.++.+|+.... ...++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-------~~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-------RTNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-------CTTEEEECSCTTCGGGGGGGCCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-------cCCeEEEEcccCChhhhcccCCc
Confidence 56789999999999999999999976567999999999988888777665 257999999987532 23568
Q ss_pred ccEEEecCCCCc----hHHHHHhcCCCCeEEEEeec
Q psy14962 91 FDAIYLSTYVPE----IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 91 ~D~i~~~~~~~~----~~~~~~~~L~~gG~lv~~~~ 122 (216)
||+|+++.+... ++.++.++|+|||++++.+.
T Consensus 148 ~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 148 VDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 999999877543 35678999999999999654
No 97
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.60 E-value=5.3e-15 Score=113.78 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=84.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--CCCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--HQAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~ 91 (216)
..++.+|||+|||+|..+..+++.. ++.+|+++|+++.+++.|++++...++ .+++.++.+|+..... ..++|
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~f 143 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHF----ENQVRIIEGNALEQFENVNDKVY 143 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTC----TTTEEEEESCGGGCHHHHTTSCE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECCHHHHHHhhccCCc
Confidence 3578899999999999999999853 467999999999999999999988653 2589999999865432 15689
Q ss_pred cEEEecCCCCc---hHHHHHhcCCCCeEEEEe
Q psy14962 92 DAIYLSTYVPE---IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 92 D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~ 120 (216)
|+|+++..... +++.+.++|+|||++++.
T Consensus 144 D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 144 DMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99999887654 458888999999999884
No 98
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.60 E-value=6.4e-15 Score=112.78 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=80.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC-CCCCC-CCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR-TGLLH-QAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~-~~~~ 91 (216)
+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++ . .++.++++|+. ..+.. +++|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--~--------~~~~~~~~d~~~~~~~~~~~~f 112 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN--A--------PHADVYEWNGKGELPAGLGAPF 112 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH--C--------TTSEEEECCSCSSCCTTCCCCE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh--C--------CCceEEEcchhhccCCcCCCCE
Confidence 568899999999999999999987 45999999999999999887 1 57899999984 33334 6789
Q ss_pred cEEEecCCCCchHHHHHhcCCCCeEEE
Q psy14962 92 DAIYLSTYVPEIPYSILLQLKPGGRLV 118 (216)
Q Consensus 92 D~i~~~~~~~~~~~~~~~~L~~gG~lv 118 (216)
|+|++......++..+.++|||||.++
T Consensus 113 D~v~~~~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 113 GLIVSRRGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEEEESCCSGGGGGHHHHEEEEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHcCCCcEEE
Confidence 999999888889999999999999999
No 99
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.59 E-value=8.4e-15 Score=117.65 Aligned_cols=106 Identities=20% Similarity=0.195 Sum_probs=88.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++..++.++|+++|+++.+++.+++++...+. .++.++.+|+.......++||+
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~~~~~~~fD~ 190 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-----LNVILFHSSSLHIGELNVEFDK 190 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-----CSEEEESSCGGGGGGGCCCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-----CeEEEEECChhhcccccccCCE
Confidence 57899999999999999999999875557999999999999999999988763 5799999998754333567999
Q ss_pred EEecCCC----------------------------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYV----------------------------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~----------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.+. ..++..+.++|||||++++++.+.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 9997552 135578889999999999977654
No 100
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.59 E-value=6.4e-14 Score=108.37 Aligned_cols=104 Identities=18% Similarity=0.288 Sum_probs=88.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|+++....++ ..++.+...|+......++.||+
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~D~ 161 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNL----GKNVKFFNVDFKDAEVPEGIFHA 161 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTC----CTTEEEECSCTTTSCCCTTCBSE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC----CCcEEEEEcChhhcccCCCcccE
Confidence 568899999999999999999988 35999999999999999999887553 25789999998765424567999
Q ss_pred EEecCCCC-chHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVP-EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~-~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.+.. .+++.+.++|+|||++++..+..
T Consensus 162 v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 162 AFVDVREPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp EEECSSCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred EEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 99987765 67899999999999999988764
No 101
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=1e-14 Score=115.04 Aligned_cols=105 Identities=29% Similarity=0.449 Sum_probs=86.2
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. ..++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.++++. .++.+..+|+...
T Consensus 48 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~ 112 (279)
T 3ccf_A 48 DLLQLLN--PQPGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNF 112 (279)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTC
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhC
Confidence 4455554 467889999999999999999883 569999999999999998763 4688999998764
Q ss_pred CCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 85 LLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
.. .++||+|++...+++ ++.++.++|+|||++++.++...
T Consensus 113 ~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 113 RV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp CC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred Cc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 44 578999999988765 56889999999999999876553
No 102
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.59 E-value=1.2e-14 Score=114.93 Aligned_cols=107 Identities=20% Similarity=0.126 Sum_probs=87.2
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. ..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...+ .++.+..+|+...
T Consensus 111 ~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~ 179 (286)
T 3m70_A 111 DVVDAAK--IISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKEN------LNISTALYDINAA 179 (286)
T ss_dssp HHHHHHH--HSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCGGGC
T ss_pred HHHHHhh--ccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcC------CceEEEEeccccc
Confidence 3444443 237889999999999999999987 4599999999999999999988754 3799999998765
Q ss_pred CCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecC
Q psy14962 85 LLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
.. .++||+|++..++++ +++.+.++|+|||.+++.+..
T Consensus 180 ~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 180 NI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp CC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred cc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 44 678999999887753 557889999999998776543
No 103
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.59 E-value=5.1e-15 Score=109.66 Aligned_cols=116 Identities=17% Similarity=0.202 Sum_probs=88.2
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. ...++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...++ ..++.++.+|+..
T Consensus 33 ~~~~~~l~-~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 33 ESIFNMIG-PYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKE----PEKFEVRKMDANR 105 (187)
T ss_dssp HHHHHHHC-SCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEESCHHH
T ss_pred HHHHHHHH-hhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCC----CcceEEEECcHHH
Confidence 34455553 2357889999999999999988875 235999999999999999999887653 2478999999764
Q ss_pred CCC----CCCCccEEEecCCCC-----chHHHH--HhcCCCCeEEEEeecCCCC
Q psy14962 84 GLL----HQAPFDAIYLSTYVP-----EIPYSI--LLQLKPGGRLVCGVGKSKS 126 (216)
Q Consensus 84 ~~~----~~~~~D~i~~~~~~~-----~~~~~~--~~~L~~gG~lv~~~~~~~~ 126 (216)
... ..++||+|+++.++. ..+..+ .++|+|||.+++.......
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 221 146799999998753 234555 7789999999998777653
No 104
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.59 E-value=1.1e-14 Score=113.50 Aligned_cols=107 Identities=18% Similarity=0.149 Sum_probs=78.9
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. +.++.+|||+|||+|.++..+++. +.+|+++|+|+.|++.|++++... .+.....+...
T Consensus 35 ~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~--------~v~~~~~~~~~ 101 (261)
T 3iv6_A 35 ENDIFLEN--IVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR--------CVTIDLLDITA 101 (261)
T ss_dssp HHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS--------CCEEEECCTTS
T ss_pred HHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc--------cceeeeeeccc
Confidence 34444443 578899999999999999999987 459999999999999999886441 22222333221
Q ss_pred --CCCCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 84 --GLLHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 84 --~~~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.....++||+|+++..+++ .+..+.++| |||++++++...
T Consensus 102 ~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 102 EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 1112468999999988764 356778899 999999988654
No 105
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.59 E-value=7.6e-15 Score=113.15 Aligned_cols=110 Identities=14% Similarity=0.139 Sum_probs=83.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhC-CCCCCCCCeEEEeccCCCCC---CCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIR-PDLLNDGRLHLRCRDGRTGL---LHQA 89 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~~~~~---~~~~ 89 (216)
..++.+|||||||+|.++..+++.. ++..++|+|+++.+++.|++++.... .......|+.++.+|+.... ...+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 3456789999999999999999874 56799999999999999998765310 00011368999999987522 3467
Q ss_pred CccEEEecCCCC--------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 90 PFDAIYLSTYVP--------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 90 ~~D~i~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+||.|++..+.+ .++..+.++|+|||.+++.+...
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH
Confidence 899999876543 36788999999999999987654
No 106
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.59 E-value=1.8e-14 Score=118.19 Aligned_cols=113 Identities=15% Similarity=0.193 Sum_probs=88.8
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
+++.+. ..++.+|||+|||+|.++..+++.. ++.+|+++|+++.+++.+++++..+++. ...++.+...|+....
T Consensus 214 ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~--~~~~v~~~~~D~~~~~ 288 (375)
T 4dcm_A 214 FMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPE--ALDRCEFMINNALSGV 288 (375)
T ss_dssp HHHTCC--CSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGG--GGGGEEEEECSTTTTC
T ss_pred HHHhCc--ccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCC--cCceEEEEechhhccC
Confidence 444443 3456899999999999999999984 4679999999999999999999886531 0125788999987643
Q ss_pred CCCCCccEEEecCCCCc-----------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 LHQAPFDAIYLSTYVPE-----------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~-----------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
..++||+|+++.+++. +++.+.++|+|||++++.+...
T Consensus 289 -~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 289 -EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp -CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred -CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 4568999999988752 4688999999999999976554
No 107
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=2e-15 Score=116.28 Aligned_cols=100 Identities=19% Similarity=0.152 Sum_probs=79.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC--CCCCCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG--LLHQAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~ 91 (216)
..++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.|+++....+ .++.++.+|+... ...+++|
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~f 129 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTLPDGHF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGSCTTCE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhhcccCCCce
Confidence 3578899999999999999997652 2389999999999999999876532 5789999998654 4456789
Q ss_pred cEEEe-cCCC-----C-----chHHHHHhcCCCCeEEEEee
Q psy14962 92 DAIYL-STYV-----P-----EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 92 D~i~~-~~~~-----~-----~~~~~~~~~L~~gG~lv~~~ 121 (216)
|+|++ .... + .+++++.++|||||++++..
T Consensus 130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 99999 3331 1 23688999999999998754
No 108
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=2.3e-15 Score=116.17 Aligned_cols=98 Identities=21% Similarity=0.201 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC--CCCCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG--LLHQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D 92 (216)
.+|.+|||||||+|..+..+++.. ..+++++|+++.+++.|+++....+ .+++++.+|+... ...+++||
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~FD 130 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTLPDGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGSCTTCEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCC------CceEEEeehHHhhcccccccCCc
Confidence 678999999999999999988763 2489999999999999999877643 5678888886532 23467899
Q ss_pred EEEecCCCC-----------chHHHHHhcCCCCeEEEEe
Q psy14962 93 AIYLSTYVP-----------EIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 93 ~i~~~~~~~-----------~~~~~~~~~L~~gG~lv~~ 120 (216)
.|+.+.... .+++++.++|||||+|++.
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 998754431 1457889999999999873
No 109
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.58 E-value=6.9e-15 Score=111.23 Aligned_cols=98 Identities=19% Similarity=0.237 Sum_probs=81.4
Q ss_pred ccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCc
Q psy14962 12 PKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPF 91 (216)
Q Consensus 12 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 91 (216)
..+.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++. ++.+..+|+.... ..++|
T Consensus 39 ~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~d~~~~~-~~~~f 103 (211)
T 3e23_A 39 GELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-----------GRPVRTMLFHQLD-AIDAY 103 (211)
T ss_dssp TTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-----------TSCCEECCGGGCC-CCSCE
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-----------CCceEEeeeccCC-CCCcE
Confidence 35678899999999999999999987 459999999999999998875 2567778876554 56789
Q ss_pred cEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+|++...+++ +++.+.++|+|||++++.....
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 99999988765 4578889999999999976544
No 110
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=5.8e-15 Score=112.66 Aligned_cols=105 Identities=13% Similarity=0.150 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CC----C
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LH----Q 88 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~----~ 88 (216)
.++.+|||+|||+|..+..+++.++++++|+++|+++.+++.|++++...++ .++++++.+|+.... .. .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~l~~~~~~~~~ 132 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL----QDKVTILNGASQDLIPQLKKKYDV 132 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEESCHHHHGGGTTTTSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC----CCceEEEECCHHHHHHHHHHhcCC
Confidence 4678999999999999999999765567999999999999999999988764 246999999974321 11 1
Q ss_pred CCccEEEecCCCCchH------HHHHhcCCCCeEEEEeecCC
Q psy14962 89 APFDAIYLSTYVPEIP------YSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 89 ~~~D~i~~~~~~~~~~------~~~~~~L~~gG~lv~~~~~~ 124 (216)
++||+|+++...++.. ..+ ++|+|||++++.....
T Consensus 133 ~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 133 DTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred CceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 6899999998776543 233 8999999999865443
No 111
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.58 E-value=8.6e-15 Score=116.88 Aligned_cols=108 Identities=11% Similarity=0.063 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCC-CCCCeEEEeccCCCC--------CC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLL-NDGRLHLRCRDGRTG--------LL 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~d~~~~--------~~ 86 (216)
++.+|||+|||+|..+..+++.. ..+|+|+|+|+.|++.|+++....+.... ...++++.+.|+... ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 57899999999998766665542 35999999999999999998876431000 000256778877321 12
Q ss_pred CCCCccEEEecCCCCc---------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 87 HQAPFDAIYLSTYVPE---------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~---------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
..++||+|+|...+++ +++++.++|||||++++.+++..
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 3568999998776642 56889999999999999987753
No 112
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.58 E-value=1.5e-14 Score=114.73 Aligned_cols=106 Identities=22% Similarity=0.296 Sum_probs=87.1
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~ 91 (216)
.+.++.+|||+|||+|..+..+++.. ..+++++|+++.+++.|++++...+. ..++.++.+|+..... ..++|
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~f 134 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKR----RFKVFFRAQDSYGRHMDLGKEF 134 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCC----SSEEEEEESCTTTSCCCCSSCE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCC----CccEEEEECCccccccCCCCCc
Confidence 35788999999999999999888762 34999999999999999999876442 2468999999876544 46789
Q ss_pred cEEEecCCCCc----------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLSTYVPE----------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~~~~~~----------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+|++...+++ ++..+.++|+|||++++.+++.
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 99999887743 4578889999999999988765
No 113
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.58 E-value=1.6e-14 Score=112.93 Aligned_cols=105 Identities=15% Similarity=0.165 Sum_probs=85.7
Q ss_pred CC-CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCC
Q psy14962 14 IQ-EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAP 90 (216)
Q Consensus 14 ~~-~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 90 (216)
+. ++.+|||+|||+|.++..+++... .+|+++|+++.+++.|++++...++ ..++.++.+|+.... ...++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~----~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQL----EDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTC----TTTEEEECSCGGGGGGTSCTTC
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCC----cccEEEEECcHHHhhhhhccCC
Confidence 56 789999999999999999998842 3999999999999999999988664 257999999987543 23578
Q ss_pred ccEEEecCCCC--------------------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 91 FDAIYLSTYVP--------------------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 91 ~D~i~~~~~~~--------------------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
||+|+++.++. .++..+.++|+|||++++.....
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 179 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE 179 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH
Confidence 99999987752 25578889999999999976443
No 114
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.58 E-value=1.1e-14 Score=113.14 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC---CCCCc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL---HQAPF 91 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~ 91 (216)
.++.+|||+|||+|..+..++... ++.+|+++|+++.+++.|+++....++ .+++++++|+..... ..++|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l-----~~v~~~~~d~~~~~~~~~~~~~f 152 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGL-----KGARALWGRAEVLAREAGHREAY 152 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC-----SSEEEEECCHHHHTTSTTTTTCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC-----CceEEEECcHHHhhcccccCCCc
Confidence 467899999999999999999875 467999999999999999999988763 579999999864332 23689
Q ss_pred cEEEecCCC--CchHHHHHhcCCCCeEEEEeecC
Q psy14962 92 DAIYLSTYV--PEIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 92 D~i~~~~~~--~~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+|++.... ..+++.+.++|+|||++++....
T Consensus 153 D~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 153 ARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp EEEEEESSCCHHHHHHHHGGGEEEEEEEEEEECS
T ss_pred eEEEECCcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999997654 34678899999999999986643
No 115
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=8.8e-15 Score=112.52 Aligned_cols=101 Identities=21% Similarity=0.126 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+. ..++.++.+|+.... ..++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~-~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPK----AEYFSFVKEDVFTWR-PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGG----GGGEEEECCCTTTCC-CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCC----CcceEEEECchhcCC-CCCCeeEEE
Confidence 4459999999999999988764 56999999999999999998765221 257999999987654 345899999
Q ss_pred ecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 96 LSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 96 ~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+...+++ +++.+.++|+|||++++.....
T Consensus 138 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 138 DYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp EESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 9887754 4588899999999999876554
No 116
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.58 E-value=2e-14 Score=112.75 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|.++..+++.. ++.+|+++|+++.+++.|+++. .++.+..+|.......+++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHRLPFSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTSCSBCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhhCCCCCCceeEE
Confidence 578899999999999999999875 3569999999999999998763 45789999987655556789999
Q ss_pred EecCCCCchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 95 YLSTYVPEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 95 ~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
++... ...+.++.++|+|||.+++.++...
T Consensus 153 ~~~~~-~~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 153 IRIYA-PCKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp EEESC-CCCHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEeCC-hhhHHHHHHhcCCCcEEEEEEcCHH
Confidence 98765 4567999999999999999887764
No 117
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.57 E-value=8.7e-15 Score=112.95 Aligned_cols=97 Identities=18% Similarity=0.159 Sum_probs=79.7
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC--CCCCCC
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG--LLHQAP 90 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~ 90 (216)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ +.++.+|.... ...+++
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~~~~~~ 101 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKSLPDKY 101 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHTSCTTC
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhhcCCCC
Confidence 4578899999999999999999887 34899999999999888642 67888887542 334678
Q ss_pred ccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 91 FDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 91 ~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
||+|++...+++ +++++.++|||||++++.++++.
T Consensus 102 fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 102 LDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp BSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred eeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 999999888754 45788999999999999887764
No 118
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.57 E-value=3.1e-15 Score=114.28 Aligned_cols=104 Identities=20% Similarity=0.273 Sum_probs=84.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC---C---
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL---H--- 87 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~--- 87 (216)
..++.+|||+|||+|..+..+++.++++.+|+++|+++.+++.|++++...+. ..++.++.+|+..... .
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~ 137 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL----SDKIGLRLSPAKDTLAELIHAGQ 137 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHHHHTTTC
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC----CCceEEEeCCHHHHHHHhhhccC
Confidence 35678999999999999999998865467999999999999999999988664 2569999999753221 1
Q ss_pred CCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 88 QAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
.++||+|+++..... +++.+.++|+|||++++..
T Consensus 138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 138 AWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 168999998877543 5688899999999999854
No 119
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.57 E-value=8.4e-15 Score=106.86 Aligned_cols=114 Identities=18% Similarity=0.100 Sum_probs=87.5
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+...+.++.+|||+|||+|..+..+++. + ..|+++|+++.+++.|++++...+ . +++++.+|+..
T Consensus 29 ~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~~d~~~ 99 (171)
T 1ws6_A 29 KALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASE-G--WEAVLVEKDPEAVRLLKENVRRTG-----L-GARVVALPVEV 99 (171)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHT-T--CEEEEECCCHHHHHHHHHHHHHHT-----C-CCEEECSCHHH
T ss_pred HHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHC-C--CeEEEEeCCHHHHHHHHHHHHHcC-----C-ceEEEeccHHH
Confidence 3444555433447889999999999999999987 2 369999999999999999988754 2 78999998764
Q ss_pred CCC----CCCCccEEEecCCC----CchHHHHH--hcCCCCeEEEEeecCCCC
Q psy14962 84 GLL----HQAPFDAIYLSTYV----PEIPYSIL--LQLKPGGRLVCGVGKSKS 126 (216)
Q Consensus 84 ~~~----~~~~~D~i~~~~~~----~~~~~~~~--~~L~~gG~lv~~~~~~~~ 126 (216)
... ..++||+|+++.++ ...+..+. ++|+|||.+++.+.....
T Consensus 100 ~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 100 FLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HHHHHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred HHHhhhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 221 12479999999765 34556777 999999999998877653
No 120
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.57 E-value=8.1e-15 Score=113.27 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC---CCCc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH---QAPF 91 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~ 91 (216)
.++.+|||+|||+|..+..++... ++.+|+++|+++.+++.|+++....++ .++.++++|+...... .++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQL-----ENTTFCHDRAETFGQRKDVRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC-----SSEEEEESCHHHHTTCTTTTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCEEEEeccHHHhcccccccCCc
Confidence 467899999999999999998753 467999999999999999999888663 5799999987643321 4689
Q ss_pred cEEEecCCC--CchHHHHHhcCCCCeEEEEeec
Q psy14962 92 DAIYLSTYV--PEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 92 D~i~~~~~~--~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
|+|++.... ..+++.+.++|+|||++++...
T Consensus 143 D~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 143 DIVTARAVARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp EEEEEECCSCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 999997743 2366888899999999988643
No 121
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.57 E-value=2.7e-14 Score=107.93 Aligned_cols=102 Identities=22% Similarity=0.261 Sum_probs=82.5
Q ss_pred HhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCC
Q psy14962 9 LLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQ 88 (216)
Q Consensus 9 ~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (216)
.+...+.++.+|||+|||+|..+..+ + ..+++++|+++.+++.++++. .++.++.+|.......+
T Consensus 29 ~l~~~~~~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~ 93 (211)
T 2gs9_A 29 ALKGLLPPGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEALPFPG 93 (211)
T ss_dssp HHHTTCCCCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTSCCSCS
T ss_pred HHHHhcCCCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcccccCCCCC
Confidence 33333457889999999999998776 1 228999999999999998764 35889999987665556
Q ss_pred CCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 89 APFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 89 ~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
++||+|++...+++ +++++.++|||||.+++.++++.
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 94 ESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp SCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 78999999988765 45888999999999999887664
No 122
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.57 E-value=8.5e-15 Score=114.50 Aligned_cols=104 Identities=19% Similarity=0.161 Sum_probs=84.3
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+.+.+. ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.++.+|+..
T Consensus 24 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----------~~~~~~~~d~~~ 87 (261)
T 3ege_A 24 NAIINLLN--LPKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVH-----------PQVEWFTGYAEN 87 (261)
T ss_dssp HHHHHHHC--CCTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCC-----------TTEEEECCCTTS
T ss_pred HHHHHHhC--CCCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhc-----------cCCEEEECchhh
Confidence 34445553 467899999999999999999873 56999999999998877543 278999999987
Q ss_pred CCCCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 84 GLLHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
....+++||+|++...+++ +++++.++|| ||++++....+
T Consensus 88 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 88 LALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred CCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 6556689999999988765 5689999999 99888876654
No 123
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.57 E-value=4.3e-14 Score=111.87 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCc---c
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPF---D 92 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---D 92 (216)
++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|++++...++ ..++.++.+|+..... ++| |
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l----~~~v~~~~~D~~~~~~--~~f~~~D 194 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGV----SDRFFVRKGEFLEPFK--EKFASIE 194 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTC----TTSEEEEESSTTGGGG--GGTTTCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECcchhhcc--cccCCCC
Confidence 6789999999999999999988 567999999999999999999988664 2359999999875332 468 9
Q ss_pred EEEecCCCC-------------------------chHHHHH-hcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVP-------------------------EIPYSIL-LQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~-------------------------~~~~~~~-~~L~~gG~lv~~~~~~ 124 (216)
+|+++.+.. .+++.+. +.|+|||.+++.....
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred EEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 999985542 3467888 9999999999976554
No 124
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.57 E-value=9e-15 Score=112.93 Aligned_cols=102 Identities=15% Similarity=0.073 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.|++++...+ ..++.++.+|+.......++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-----KRVRNYFCCGLQDFTPEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-----GGEEEEEECCGGGCCCCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-----CceEEEEEcChhhcCCCCCCEEEEE
Confidence 58899999999999999988774 3499999999999999999876532 2468899999876555566899999
Q ss_pred ecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 96 LSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 96 ~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+...+++ ++..+.++|+|||++++..+..
T Consensus 152 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 152 IQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 9988654 4578889999999999976544
No 125
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.57 E-value=3.2e-14 Score=114.06 Aligned_cols=120 Identities=15% Similarity=0.120 Sum_probs=89.2
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCC--CCCCCeEEEecc
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDL--LNDGRLHLRCRD 80 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~d 80 (216)
+..+++.+...+.++.+|||+|||+|..+..+++. +..+++++|+++.+++.|+++....+... ....++.++++|
T Consensus 21 ~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D 98 (313)
T 3bgv_A 21 IGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITAD 98 (313)
T ss_dssp HHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECC
T ss_pred HHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEec
Confidence 44555555443457889999999999999988875 35699999999999999999876531000 012478999999
Q ss_pred CCCCC----C--CCCCccEEEecCCCCch----------HHHHHhcCCCCeEEEEeecCC
Q psy14962 81 GRTGL----L--HQAPFDAIYLSTYVPEI----------PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 81 ~~~~~----~--~~~~~D~i~~~~~~~~~----------~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+.... . ..++||+|++...++++ +.++.++|+|||.+++.++..
T Consensus 99 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 99 SSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred ccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 87543 2 23589999999887543 478889999999999988765
No 126
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.57 E-value=4.1e-14 Score=109.78 Aligned_cols=99 Identities=21% Similarity=0.233 Sum_probs=80.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+++....+ .++.++.+|+..... .++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERN------LKIEFLQGDVLEIAF-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEESCGGGCCC-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcC------CceEEEECChhhccc-CCCccEE
Confidence 56789999999999999999887 4599999999999999999987644 368999999875443 3679999
Q ss_pred EecCCC---------CchHHHHHhcCCCCeEEEEeecC
Q psy14962 95 YLSTYV---------PEIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 95 ~~~~~~---------~~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
++.... ..+++.+.++|+|||.+++..++
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 975332 12557888999999999987765
No 127
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=1e-14 Score=109.86 Aligned_cols=103 Identities=12% Similarity=0.073 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC-CCCCCCccEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG-LLHQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~i 94 (216)
++.+|||+|||+|.++..++... ..+|+++|+++.+++.|++++...+ ..++.++.+|+... ....++||+|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~-----~~~v~~~~~D~~~~~~~~~~~fD~V 126 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLK-----AGNARVVNSNAMSFLAQKGTPHNIV 126 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSCHHHHHSSCCCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEECCHHHHHhhcCCCCCEE
Confidence 67899999999999999877763 2499999999999999999998855 25899999997642 2234689999
Q ss_pred EecCCCC-----chHHHHHh--cCCCCeEEEEeecCCC
Q psy14962 95 YLSTYVP-----EIPYSILL--QLKPGGRLVCGVGKSK 125 (216)
Q Consensus 95 ~~~~~~~-----~~~~~~~~--~L~~gG~lv~~~~~~~ 125 (216)
+++.+++ .++..+.+ +|+|||++++.+....
T Consensus 127 ~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 127 FVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp EECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred EECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 9998854 24455544 5999999999876653
No 128
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.57 E-value=7.8e-15 Score=113.92 Aligned_cols=103 Identities=15% Similarity=0.232 Sum_probs=84.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------C
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------H 87 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~ 87 (216)
.++.+|||+|||+|+.+..+++.+.++++|+++|+++.+++.|++++...++ ..+++++.+|+..... .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV----DHKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHHHSGGG
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCeEEEECCHHHHHHHHHhccCC
Confidence 4678999999999999999999875467999999999999999999987653 2579999999753221 1
Q ss_pred CCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 88 QAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
.++||+|+++..... +++.+.++|+|||++++..
T Consensus 154 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 154 HGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 468999999876543 5678899999999998853
No 129
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.57 E-value=4e-14 Score=111.61 Aligned_cols=101 Identities=20% Similarity=0.247 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|..+..+++.. ++.+|+++|+|+.+++.|++++...++ .++.++.+|+.... ..++||+|
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~-----~~v~~~~~d~~~~~-~~~~fD~I 180 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAI-----KNIHILQSDWFSAL-AGQQFAMI 180 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEECCSTTGGG-TTCCEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEcchhhhc-ccCCccEE
Confidence 567899999999999999999875 457999999999999999999988663 57999999987543 25689999
Q ss_pred EecCCCC-------------------------------chHHHHHhcCCCCeEEEEeec
Q psy14962 95 YLSTYVP-------------------------------EIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 95 ~~~~~~~-------------------------------~~~~~~~~~L~~gG~lv~~~~ 122 (216)
+++.+.. .++..+.++|+|||++++...
T Consensus 181 v~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 181 VSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp EECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred EECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9986542 234678899999999999643
No 130
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.56 E-value=2.6e-14 Score=107.67 Aligned_cols=101 Identities=11% Similarity=0.174 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.+++++...+. .++.+..+|+.... ..++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~-~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKL-----ENIEPVQSRVEEFP-SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEECCTTTSC-CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCeEEEecchhhCC-ccCCcCEEE
Confidence 47899999999999999999875 456999999999999999999887553 56999999987544 346899999
Q ss_pred ecCCC--CchHHHHHhcCCCCeEEEEeecC
Q psy14962 96 LSTYV--PEIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 96 ~~~~~--~~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+.... ..++..+.++|+|||.+++....
T Consensus 138 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 138 SRAFASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp CSCSSSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred EeccCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 86532 23678889999999999997554
No 131
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.56 E-value=7.7e-16 Score=119.25 Aligned_cols=104 Identities=16% Similarity=0.212 Sum_probs=86.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC------C
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH------Q 88 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~ 88 (216)
.++.+|||+|||+|..+..+++.++++++|+++|+++.+++.|++++...++ ..++.++.+|+...... .
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~gda~~~l~~~~~~~~~ 134 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ----EHKIKLRLGPALDTLHSLLNEGGE 134 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC----TTTEEEEESCHHHHHHHHHHHHCS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHHHhhccCC
Confidence 4678999999999999999999875567999999999999999999988664 25899999997543221 3
Q ss_pred CCccEEEecCCCCc---hHHHHHhcCCCCeEEEEeec
Q psy14962 89 APFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 89 ~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~ 122 (216)
++||+|+++..... +++.+.++|+|||++++...
T Consensus 135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 135 HQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp SCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 68999999887654 46788999999999999543
No 132
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.56 E-value=3e-14 Score=109.39 Aligned_cols=98 Identities=18% Similarity=0.253 Sum_probs=81.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC----CCCCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT----GLLHQA 89 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~ 89 (216)
+.++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++.. ..++.++.+|+.. .... +
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~-------~~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAE-------RENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTT-------CTTEEEEECCTTCGGGGTTTS-C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhc-------CCCeEEEECCCCCcccccccC-c
Confidence 46788999999999999999999864 46999999999999999887654 2679999999875 3333 6
Q ss_pred CccEEEecCCCC----chHHHHHhcCCCCeEEEEe
Q psy14962 90 PFDAIYLSTYVP----EIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 90 ~~D~i~~~~~~~----~~~~~~~~~L~~gG~lv~~ 120 (216)
+||+|+.+...+ .++..+.+.|+|||++++.
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 899999765544 2478999999999999996
No 133
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.56 E-value=3.4e-15 Score=113.54 Aligned_cols=112 Identities=15% Similarity=0.101 Sum_probs=80.4
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
.++.+. ..++.+|||+|||+|..+..+++.. ++.+|+|+|+++.+++.+.+....... ..+..++.++++|+....
T Consensus 19 ~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~-~~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 19 EFEQLR--SQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPA-KGGLPNLLYLWATAERLP 94 (218)
T ss_dssp HHHHHH--TTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGG-GTCCTTEEEEECCSTTCC
T ss_pred HHHHhh--ccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhh-hcCCCceEEEecchhhCC
Confidence 444443 5688999999999999999999974 567999999999988864433321000 011358999999998755
Q ss_pred CCCCCccEEEecCCC-----------CchHHHHHhcCCCCeEEEEeec
Q psy14962 86 LHQAPFDAIYLSTYV-----------PEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~-----------~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
...+. |.|++.... ..+++++.++|||||.+++...
T Consensus 95 ~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 95 PLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp SCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 54455 777644322 4467899999999999999643
No 134
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.56 E-value=3.1e-14 Score=108.91 Aligned_cols=101 Identities=23% Similarity=0.287 Sum_probs=83.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---CCCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL---LHQAP 90 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~ 90 (216)
+.++.+|||+|||+|.++..+++..++..+|+++|+++.+++.+++++.. ..++.++.+|+.... ...++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-------~~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-------RRNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-------CTTEEEEECCTTCGGGGTTTCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-------cCCCEEEEccCCCcchhhcccCC
Confidence 56789999999999999999999876667999999999999999887754 257999999987521 12357
Q ss_pred ccEEEecCCCCc----hHHHHHhcCCCCeEEEEee
Q psy14962 91 FDAIYLSTYVPE----IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 91 ~D~i~~~~~~~~----~~~~~~~~L~~gG~lv~~~ 121 (216)
||+|+++.+.+. ++..+.++|+|||++++..
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999877553 3788999999999999873
No 135
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.56 E-value=2.5e-14 Score=106.00 Aligned_cols=111 Identities=23% Similarity=0.244 Sum_probs=88.5
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+++.+. +.++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...+. ..++.+..+|....
T Consensus 24 ~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 24 LIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGL----GDNVTLMEGDAPEA 94 (192)
T ss_dssp HHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTC----CTTEEEEESCHHHH
T ss_pred HHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCC----CcceEEEecCHHHh
Confidence 3444443 5788999999999999999998874 5999999999999999999887542 25789999987642
Q ss_pred CCCCCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEeecCC
Q psy14962 85 LLHQAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
....++||+|++..++++ ++..+.++|+|||.+++.....
T Consensus 95 ~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 95 LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred cccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecCc
Confidence 222257999999988654 5688899999999999987654
No 136
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=1.2e-14 Score=112.48 Aligned_cols=107 Identities=17% Similarity=0.171 Sum_probs=84.1
Q ss_pred HHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC
Q psy14962 7 IELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL 86 (216)
Q Consensus 7 ~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (216)
+..+..++.++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.++++.. ..++.++.+|+.....
T Consensus 47 ~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~ 115 (245)
T 3ggd_A 47 LPRFELLFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENT--------AANISYRLLDGLVPEQ 115 (245)
T ss_dssp HHHHTTTSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSC--------CTTEEEEECCTTCHHH
T ss_pred HHHHhhccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCc--------ccCceEEECccccccc
Confidence 33344456788999999999999999999883 389999999999999998752 2579999999875322
Q ss_pred C-----CCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 87 H-----QAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 87 ~-----~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
. ...||+|++...+++ +++++.++|||||++++.....
T Consensus 116 ~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 116 AAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred ccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 1 124899999887754 4578899999999988876544
No 137
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=3.1e-14 Score=111.31 Aligned_cols=106 Identities=16% Similarity=0.149 Sum_probs=84.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHH---hCCCCCCCCCeEEEeccCCCCC-----
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMR---IRPDLLNDGRLHLRCRDGRTGL----- 85 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~d~~~~~----- 85 (216)
..++.+|||+|||+|.++..+++.. ++.+|+++|+++.+++.|++++.. .++ ..++.++++|+....
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l----~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAF----SARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTT----GGGEEEEECCTTCCHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCC----cceEEEEeCCHHHHhhhhhh
Confidence 4577899999999999999999885 457999999999999999998765 442 246999999987551
Q ss_pred --CCCCCccEEEecCCCC------------------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 --LHQAPFDAIYLSTYVP------------------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 --~~~~~~D~i~~~~~~~------------------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
...++||+|+++.++. .+++.+.++|+|||++++..+..
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 173 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ 173 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH
Confidence 2356899999986643 23577889999999999876544
No 138
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.55 E-value=5.3e-14 Score=109.06 Aligned_cols=108 Identities=13% Similarity=0.170 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCC-C--CCCCeEEEeccCCCCC---CCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDL-L--NDGRLHLRCRDGRTGL---LHQ 88 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~-~--~~~~~~~~~~d~~~~~---~~~ 88 (216)
.++.+|||+|||+|.++..+++.. +...|+|+|+++.+++.+++++....... . +..++.++.+|+.... ...
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 467899999999999999999885 45699999999999999999877640000 0 1368999999987522 345
Q ss_pred CCccEEEecCCCC--------------chHHHHHhcCCCCeEEEEeecC
Q psy14962 89 APFDAIYLSTYVP--------------EIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 89 ~~~D~i~~~~~~~--------------~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+.+|.|++..+-+ .++..+.++|+|||.+++.+..
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 7899998765544 4678899999999999996543
No 139
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.55 E-value=6.3e-15 Score=116.89 Aligned_cols=114 Identities=16% Similarity=0.111 Sum_probs=76.4
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-----------CCCC--
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPD-----------LLND-- 71 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-----------~~~~-- 71 (216)
.+.+.+.....++.+|||+|||+|.....++... +.+|+|+|+|+.|++.|++++...... ....
T Consensus 60 ~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 60 CLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 3444443222467899999999999554444432 359999999999999998865321000 0000
Q ss_pred ------------CCeEEEeccCCC-CC-----CCCCCccEEEecCCCCc----------hHHHHHhcCCCCeEEEEe
Q psy14962 72 ------------GRLHLRCRDGRT-GL-----LHQAPFDAIYLSTYVPE----------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 72 ------------~~~~~~~~d~~~-~~-----~~~~~~D~i~~~~~~~~----------~~~~~~~~L~~gG~lv~~ 120 (216)
..+.++.+|+.. .+ ...++||+|++...+++ +++++.++|||||+|++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 014577778765 22 12356999999988765 347889999999999996
No 140
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.55 E-value=4.1e-14 Score=115.83 Aligned_cols=113 Identities=19% Similarity=0.230 Sum_probs=85.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH-------HHhCCCCCCCCCeE
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETV-------MRIRPDLLNDGRLH 75 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~-------~~~~~~~~~~~~~~ 75 (216)
+..+++.+. +.++.+|||+|||+|.++..++...+ ..+|+|+|+++.+++.|+++. ...++ ...++.
T Consensus 162 i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl---~~~rVe 235 (438)
T 3uwp_A 162 VAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGK---KHAEYT 235 (438)
T ss_dssp HHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB---CCCEEE
T ss_pred HHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC---CCCCeE
Confidence 445666664 68899999999999999999998753 336999999999999998754 23331 125899
Q ss_pred EEeccCCCCCCCC--CCccEEEecCCCCc-----hHHHHHhcCCCCeEEEEee
Q psy14962 76 LRCRDGRTGLLHQ--APFDAIYLSTYVPE-----IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 76 ~~~~d~~~~~~~~--~~~D~i~~~~~~~~-----~~~~~~~~L~~gG~lv~~~ 121 (216)
++++|+....... ..||+|+++..+.. .+.++.+.|||||+|++..
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred EEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence 9999987543322 46999998766422 4577889999999999864
No 141
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=3.5e-14 Score=111.78 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=89.2
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.++.+|||+|||+|.++..+++..+ ..+|+++|+++.+++.|++++..+++ .++.++.+|+... ...++||
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l-----~~~~~~~~d~~~~-~~~~~~D 188 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKL-----NNVIPILADNRDV-ELKDVAD 188 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTC-----SSEEEEESCGGGC-CCTTCEE
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-----CCEEEEECChHHc-CccCCce
Confidence 367889999999999999999999853 45999999999999999999988663 5788999998765 3356899
Q ss_pred EEEecCCC--CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYV--PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~--~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|+++.+. ..++..+.+.|+|||++++++...
T Consensus 189 ~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 189 RVIMGYVHKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEECCcccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 99999875 447788899999999999987654
No 142
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=1.8e-15 Score=114.28 Aligned_cols=112 Identities=21% Similarity=0.276 Sum_probs=68.4
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. ...++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.|++++...+ .+++++.+|+.
T Consensus 18 ~~~~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~d~~ 89 (215)
T 4dzr_A 18 VEEAIRFLK-RMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG------AVVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHT-TCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------------CCHHHHH
T ss_pred HHHHHHHhh-hcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC------CceEEEEcchH
Confidence 444555553 22678899999999999999999984 46799999999999999999887643 26788888876
Q ss_pred CCCCC----CCCccEEEecCCCC--------------------------------chHHHHHhcCCCCeE-EEEeec
Q psy14962 83 TGLLH----QAPFDAIYLSTYVP--------------------------------EIPYSILLQLKPGGR-LVCGVG 122 (216)
Q Consensus 83 ~~~~~----~~~~D~i~~~~~~~--------------------------------~~~~~~~~~L~~gG~-lv~~~~ 122 (216)
..... .++||+|+++.++. .++..+.++|+|||+ +++...
T Consensus 90 ~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 90 EWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 52221 27899999986652 233556689999999 555443
No 143
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.54 E-value=1.6e-14 Score=105.57 Aligned_cols=95 Identities=14% Similarity=0.176 Sum_probs=80.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++ . .++.+..+| .....++||+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~--~--------~~v~~~~~d---~~~~~~~~D~ 78 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK--F--------DSVITLSDP---KEIPDNSVDF 78 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH--C--------TTSEEESSG---GGSCTTCEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh--C--------CCcEEEeCC---CCCCCCceEE
Confidence 5678899999999999999999874 3999999999999999887 1 578999998 2334578999
Q ss_pred EEecCCCCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ +++++.++|+|||++++.....
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 999998875 4689999999999999976544
No 144
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1e-13 Score=101.99 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=85.9
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+++.+. ..++.+|||+|||+|..+..+++ +..+++++|+++.+++.+++++...+. .++.++.+|+..
T Consensus 25 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~ 94 (183)
T 2yxd_A 25 AVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNI-----KNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHHC--CCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTC-----CSEEEEESCHHH
T ss_pred HHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCC-----CcEEEEECCccc
Confidence 44455553 56788999999999999999988 356999999999999999999887652 579999999865
Q ss_pred CCCCCCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 84 GLLHQAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
....++||+|+++.+ .. ++..+.+. |||.+++......
T Consensus 95 -~~~~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 95 -VLDKLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp -HGGGCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred -cccCCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 333468999999887 33 45666666 9999999876654
No 145
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.54 E-value=1.1e-13 Score=114.89 Aligned_cols=113 Identities=16% Similarity=0.181 Sum_probs=84.9
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHH-------HHHHHHhCCCCCCCCCeE
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDA-------WETVMRIRPDLLNDGRLH 75 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a-------~~~~~~~~~~~~~~~~~~ 75 (216)
++.+++.+. +.++.+|||+|||+|..+..+++..+ ..+|+|+|+++.+++.| ++++...++ ...++.
T Consensus 231 v~~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl---~~~nV~ 304 (433)
T 1u2z_A 231 LSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGM---RLNNVE 304 (433)
T ss_dssp HHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB---CCCCEE
T ss_pred HHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC---CCCceE
Confidence 445555553 57899999999999999999999864 34899999999999988 777776541 125889
Q ss_pred EEeccCCCCC----CCCCCccEEEecCCCC-----chHHHHHhcCCCCeEEEEee
Q psy14962 76 LRCRDGRTGL----LHQAPFDAIYLSTYVP-----EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 76 ~~~~d~~~~~----~~~~~~D~i~~~~~~~-----~~~~~~~~~L~~gG~lv~~~ 121 (216)
++.+|..... ...++||+|+++..+. ..+..+.++|||||++++..
T Consensus 305 ~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 305 FSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred EEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 9887654221 1136799999865442 24578999999999999863
No 146
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.54 E-value=2e-14 Score=113.24 Aligned_cols=106 Identities=21% Similarity=0.172 Sum_probs=86.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC----CCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----HQA 89 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~ 89 (216)
..++.+|||+|||+|..+..+++..+...+|+++|+++.+++.+++++...+. .++.++.+|+..... ..+
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV-----LNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCHHHHHHHHHHTTC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC-----CcEEEEeCChHhcchhhhhccc
Confidence 57899999999999999999998764346999999999999999999988653 589999999764322 246
Q ss_pred CccEEEecCCC------------------------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 90 PFDAIYLSTYV------------------------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 90 ~~D~i~~~~~~------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+||+|+++.+. ..+++.+.++|||||++++++.+.
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 79999998553 225678889999999999987665
No 147
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.53 E-value=4.9e-14 Score=110.06 Aligned_cols=103 Identities=24% Similarity=0.231 Sum_probs=81.1
Q ss_pred HHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC
Q psy14962 8 ELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH 87 (216)
Q Consensus 8 ~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (216)
+.+...+.++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++.. . .++.+|+......
T Consensus 46 ~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~---------~--~~~~~d~~~~~~~ 111 (260)
T 2avn_A 46 SFLEEYLKNPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV---------K--NVVEAKAEDLPFP 111 (260)
T ss_dssp HHHHHHCCSCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC---------S--CEEECCTTSCCSC
T ss_pred HHHHHhcCCCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC---------C--CEEECcHHHCCCC
Confidence 333333457889999999999999999887 4599999999999999987632 1 2788888765555
Q ss_pred CCCccEEEecCCCCc-------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 88 QAPFDAIYLSTYVPE-------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~-------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.++||+|++...+.+ +++++.++|+|||.+++.+++.
T Consensus 112 ~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp TTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 678999999765432 4588899999999999987664
No 148
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.53 E-value=1.9e-14 Score=110.99 Aligned_cols=103 Identities=15% Similarity=0.236 Sum_probs=84.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------C
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------H 87 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~ 87 (216)
.++.+|||+|||+|+.+..+++.++++++++++|+++.+++.|++++...++ .++++++.+|+..... .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV----EHKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHHHSTTC
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHHHHhccCC
Confidence 4678999999999999999999875567999999999999999999988653 2479999999753211 1
Q ss_pred CCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 88 QAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
.++||+|+++..... +++.+.++|+|||++++..
T Consensus 145 ~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 145 EGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 467999999876543 5688899999999998853
No 149
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.53 E-value=1.8e-14 Score=108.96 Aligned_cols=102 Identities=19% Similarity=0.162 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC-CCCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG-LLHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~ 93 (216)
.++.+|||+|||+|..+..+++..+++.+|+++|+++.+++.|++++...++ ..+++++.+|.... ....+ ||+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~-fD~ 129 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL----IDRVELQVGDPLGIAAGQRD-IDI 129 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG----GGGEEEEESCHHHHHTTCCS-EEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC----CceEEEEEecHHHHhccCCC-CCE
Confidence 4678999999999999999998864467999999999999999999887653 24689999997532 11235 999
Q ss_pred EEecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
|+++..... +++.+.++|+|||++++..
T Consensus 130 v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 130 LFMDCDVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 999865543 5688899999999999854
No 150
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.53 E-value=1.3e-13 Score=120.82 Aligned_cols=118 Identities=12% Similarity=0.036 Sum_probs=91.8
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCC-CCCCCCeEEEeccCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPD-LLNDGRLHLRCRDGR 82 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~d~~ 82 (216)
..+++.+. ..++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++...... ..+..++.++.+|+.
T Consensus 711 e~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 711 EYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 33445554 247899999999999999999988544469999999999999999877643210 012357999999998
Q ss_pred CCCCCCCCccEEEecCCCCch--------HHHHHhcCCCCeEEEEeecCC
Q psy14962 83 TGLLHQAPFDAIYLSTYVPEI--------PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~~--------~~~~~~~L~~gG~lv~~~~~~ 124 (216)
......++||+|++...++++ +..+.++|||| .+++++++.
T Consensus 789 dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 789 EFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp SCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred hCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 766667889999999998763 36778999999 888877665
No 151
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.52 E-value=2.7e-14 Score=109.73 Aligned_cols=104 Identities=17% Similarity=0.273 Sum_probs=85.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-C--CCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-H--QAP 90 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~--~~~ 90 (216)
..++.+|||+|||+|..+..+++.. ++.+|+++|+++.+++.|++++...+. ..++.++.+|+..... . .++
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~ 126 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGL----ESRIELLFGDALQLGEKLELYPL 126 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCGGGSHHHHTTSCC
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECCHHHHHHhcccCCC
Confidence 3578899999999999999999986 356999999999999999999887653 2469999999865321 1 468
Q ss_pred ccEEEecCCCC---chHHHHHhcCCCCeEEEEeec
Q psy14962 91 FDAIYLSTYVP---EIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 91 ~D~i~~~~~~~---~~~~~~~~~L~~gG~lv~~~~ 122 (216)
||+|+++.+.+ .++..+.++|+|||++++...
T Consensus 127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 99999988874 356889999999999999743
No 152
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=1.4e-13 Score=102.24 Aligned_cols=98 Identities=22% Similarity=0.249 Sum_probs=80.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++. .++.++..|+.......++||+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~----------~~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF----------PEARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTTSCCCCCCEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC----------CCCcEEEcccccCCCCCCceeE
Confidence 568899999999999999999887 359999999999999998763 4588999998765445678999
Q ss_pred EEec-CCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLS-TYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~-~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++. ..+++ ++..+.++|+|||.+++.....
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9998 44432 4578889999999999976554
No 153
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.52 E-value=1.7e-14 Score=111.41 Aligned_cols=104 Identities=21% Similarity=0.308 Sum_probs=84.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
..++.+|||+|||+|..+..+++..+++.+|+++|+++.+++.|++++...+. ..++.++.+|+.....
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~~~~~~~~~~~ 133 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL----ENKIFLKLGSALETLQVLIDSKS 133 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHHHCSS
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCEEEEECCHHHHHHHHHhhcc
Confidence 45788999999999999999999875456999999999999999999887553 2458999998753211
Q ss_pred --------C-C-CCccEEEecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 87 --------H-Q-APFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 --------~-~-~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
. . ++||+|+++..... +++.+.++|+|||++++..
T Consensus 134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 2 67999999877664 5588999999999999864
No 154
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.52 E-value=1.7e-14 Score=109.82 Aligned_cols=91 Identities=21% Similarity=0.233 Sum_probs=75.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
++.+|||+|||+|..+..+++. +++|+++.+++.++++ ++.++.+|+.......++||+|+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~------------~~~~~~~d~~~~~~~~~~fD~v~ 107 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR------------GVFVLKGTAENLPLKDESFDFAL 107 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT------------TCEEEECBTTBCCSCTTCEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc------------CCEEEEcccccCCCCCCCeeEEE
Confidence 4889999999999998876532 9999999999988764 47888999876555567899999
Q ss_pred ecCCCCc------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 96 LSTYVPE------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 96 ~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+...+++ ++..+.++|+|||.+++..++..
T Consensus 108 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 108 MVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp EESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 9988754 56888999999999999876553
No 155
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.52 E-value=6.7e-14 Score=111.21 Aligned_cols=109 Identities=22% Similarity=0.183 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~ 93 (216)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+...+...+++++.+|+..... ..++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 456899999999999999999874 34689999999999999999876542101123589999999875443 3578999
Q ss_pred EEecCCCC----------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVP----------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++...+ .+++.+.++|+|||++++...++
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 99976542 35678999999999999987554
No 156
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.52 E-value=7.2e-14 Score=117.92 Aligned_cols=104 Identities=22% Similarity=0.284 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCccEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~i 94 (216)
++.+|||+|||+|..+..+++..+..+.|+++|+++.+++.+++++...+. .++.++.+|+..... ..++||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-----~nv~~~~~D~~~~~~~~~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-----SNVALTHFDGRVFGAAVPEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEECCCSTTHHHHSTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCCHHHhhhhccccCCEE
Confidence 899999999999999999999876557999999999999999999988763 679999999865332 34679999
Q ss_pred EecCCCC----------------------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 95 YLSTYVP----------------------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 95 ~~~~~~~----------------------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+++.+.. .++..+.++|||||++++++++.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 9965531 13567779999999999987654
No 157
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.51 E-value=9.2e-14 Score=107.90 Aligned_cols=103 Identities=16% Similarity=0.080 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHh---CCCCCCCCC------------------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRI---RPDLLNDGR------------------ 73 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~---~~~~~~~~~------------------ 73 (216)
++.+|||+|||+|.++..+++.. .++.+|+|+|+|+.+++.|++++... ++ ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 126 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL----TARELERREQSERFGKPSYLE 126 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH----HHHHHHHHHHHHHHCCHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc----cccchhhhhhhhhcccccchh
Confidence 56799999999999999998872 13458999999999999999887653 21 001
Q ss_pred -------eE-------------EEeccCCCCCC-----CCCCccEEEecCCCC---------------chHHHHHhcCCC
Q psy14962 74 -------LH-------------LRCRDGRTGLL-----HQAPFDAIYLSTYVP---------------EIPYSILLQLKP 113 (216)
Q Consensus 74 -------~~-------------~~~~d~~~~~~-----~~~~~D~i~~~~~~~---------------~~~~~~~~~L~~ 113 (216)
+. +..+|+..... ...+||+|+++.++. .++..+.++|+|
T Consensus 127 ~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 206 (250)
T 1o9g_A 127 AAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT
T ss_pred hhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC
Confidence 55 89999875432 334799999986642 356788999999
Q ss_pred CeEEEEeec
Q psy14962 114 GGRLVCGVG 122 (216)
Q Consensus 114 gG~lv~~~~ 122 (216)
||++++...
T Consensus 207 gG~l~~~~~ 215 (250)
T 1o9g_A 207 HAVIAVTDR 215 (250)
T ss_dssp TCEEEEEES
T ss_pred CcEEEEeCc
Confidence 999998433
No 158
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.51 E-value=3.7e-15 Score=115.03 Aligned_cols=99 Identities=17% Similarity=0.095 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...++ ..++.++.+|+.... ..++||+|
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~D~v 148 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGI----ADKIEFICGDFLLLA-SFLKADVV 148 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHG-GGCCCSEE
T ss_pred cCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC----CcCeEEEECChHHhc-ccCCCCEE
Confidence 47899999999999999999987 35999999999999999999987552 147999999986543 45689999
Q ss_pred EecCCCCchH------HHHHhcCCCCeEEEEee
Q psy14962 95 YLSTYVPEIP------YSILLQLKPGGRLVCGV 121 (216)
Q Consensus 95 ~~~~~~~~~~------~~~~~~L~~gG~lv~~~ 121 (216)
+++.++++.. ..+.++|+|||.+++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 149 FLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp EECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred EECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 9998886532 35778999999977654
No 159
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.51 E-value=3.9e-14 Score=104.26 Aligned_cols=99 Identities=10% Similarity=0.159 Sum_probs=79.1
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.+..+|||+|||+|.++..++... |+++|+++|+|+.|++.+++++...|. ..++.+ .|.... ...++||
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~----~~~v~~--~d~~~~-~~~~~~D 117 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKT----TIKYRF--LNKESD-VYKGTYD 117 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCC----SSEEEE--ECCHHH-HTTSEEE
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCC----CccEEE--eccccc-CCCCCcC
Confidence 45678899999999999999987763 567999999999999999999988663 124544 665433 3457799
Q ss_pred EEEecCCCCch------HHHHHhcCCCCeEEEE
Q psy14962 93 AIYLSTYVPEI------PYSILLQLKPGGRLVC 119 (216)
Q Consensus 93 ~i~~~~~~~~~------~~~~~~~L~~gG~lv~ 119 (216)
+|++...++.+ +..+.+.|+|||.+|-
T Consensus 118 vVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 118 VVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp EEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred hhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 99999998764 3578899999998876
No 160
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.51 E-value=3.2e-14 Score=110.87 Aligned_cols=106 Identities=25% Similarity=0.357 Sum_probs=83.6
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
+++.+...+.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.+++++..++. . +++..+|.....
T Consensus 110 ~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~-----~-v~~~~~d~~~~~ 180 (254)
T 2nxc_A 110 ALKALARHLRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGV-----R-PRFLEGSLEAAL 180 (254)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTC-----C-CEEEESCHHHHG
T ss_pred HHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCC-----c-EEEEECChhhcC
Confidence 34444434578899999999999999998876 3 3999999999999999999887552 3 788888875432
Q ss_pred CCCCCccEEEecCCCC---chHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVP---EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~---~~~~~~~~~L~~gG~lv~~~ 121 (216)
+.++||+|+++...+ .++..+.++|+|||+++++.
T Consensus 181 -~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 181 -PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp -GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 346799999986544 35688899999999999964
No 161
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.51 E-value=3.6e-14 Score=108.69 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=77.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCC-HHHHHHH---HHHHHHhCCCCCCCCCeEEEeccCCCCCCC-C
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHM-REQCEDA---WETVMRIRPDLLNDGRLHLRCRDGRTGLLH-Q 88 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~-~~~~~~a---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~ 88 (216)
..++.+|||+|||+|..+..+++. .++..|+|+|+| +.+++.| +++....+ ..++.++.+|+...+.. .
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-----~~~v~~~~~d~~~l~~~~~ 95 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGG-----LSNVVFVIAAAESLPFELK 95 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-----CSSEEEECCBTTBCCGGGT
T ss_pred CCCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-----CCCeEEEEcCHHHhhhhcc
Confidence 367889999999999999999875 356799999999 6676666 66655544 36799999998765321 2
Q ss_pred CCccEEEecCCCC-----------chHHHHHhcCCCCeEEEEee
Q psy14962 89 APFDAIYLSTYVP-----------EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 89 ~~~D~i~~~~~~~-----------~~~~~~~~~L~~gG~lv~~~ 121 (216)
+.+|.|+++.+.+ .++.++.++|||||++++..
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 5577777765543 24688999999999999843
No 162
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.50 E-value=2.9e-14 Score=109.15 Aligned_cols=104 Identities=21% Similarity=0.235 Sum_probs=84.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC---CC--
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL---HQ-- 88 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~-- 88 (216)
..++.+|||+|||+|..+..+++..+++.+|+++|+++.+++.|++++...+. ..+++++.+|+..... ..
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~i~~~~~d~~~~~~~~~~~~~ 142 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA----EHKIDLRLKPALETLDELLAAGE 142 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHHHHHTTC
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC----CCeEEEEEcCHHHHHHHHHhcCC
Confidence 45678999999999999999998765467999999999999999999887653 2579999998753211 11
Q ss_pred -CCccEEEecCCCC---chHHHHHhcCCCCeEEEEee
Q psy14962 89 -APFDAIYLSTYVP---EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 89 -~~~D~i~~~~~~~---~~~~~~~~~L~~gG~lv~~~ 121 (216)
++||+|+++.... .+++.+.++|+|||.+++..
T Consensus 143 ~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 143 AGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp TTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 6799999987754 35788999999999999853
No 163
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.50 E-value=2.4e-14 Score=110.11 Aligned_cols=104 Identities=18% Similarity=0.189 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC----CCC--
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----LHQ-- 88 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~-- 88 (216)
.++.+|||+|||+|+.+..+++..+++++++++|+++.+++.|++++...+. ..++.++.+|+.... ..+
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~~d~~~~l~~l~~~~~~ 146 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV----AEKISLRLGPALATLEQLTQGKPL 146 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEESCHHHHHHHHHTSSSC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHHHHhcCCC
Confidence 4678999999999999999999865467999999999999999999887663 246899999864221 112
Q ss_pred CCccEEEecCCCC---chHHHHHhcCCCCeEEEEeec
Q psy14962 89 APFDAIYLSTYVP---EIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 89 ~~~D~i~~~~~~~---~~~~~~~~~L~~gG~lv~~~~ 122 (216)
++||+|+++.... .+++.+.++|+|||++++...
T Consensus 147 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 147 PEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp CCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 6799999987654 356888999999999998643
No 164
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.50 E-value=4.8e-14 Score=110.02 Aligned_cols=107 Identities=17% Similarity=0.116 Sum_probs=79.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCC------------CCC-----------
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPD------------LLN----------- 70 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~------------~~~----------- 70 (216)
..++.+|||+|||+|..+..+++.. . .+|+++|+++.+++.+++++...+.. ..+
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 3567899999999999998888762 1 38999999999999999887541100 000
Q ss_pred -CCCe-EEEeccCCCCCC-CC---CCccEEEecCCCC----c------hHHHHHhcCCCCeEEEEeec
Q psy14962 71 -DGRL-HLRCRDGRTGLL-HQ---APFDAIYLSTYVP----E------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 71 -~~~~-~~~~~d~~~~~~-~~---~~~D~i~~~~~~~----~------~~~~~~~~L~~gG~lv~~~~ 122 (216)
..++ .+..+|+..... .. ++||+|++...++ + ++.++.++|+|||++++...
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 0027 899999875432 33 7899999988876 3 45788899999999999764
No 165
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.50 E-value=1e-13 Score=112.62 Aligned_cols=101 Identities=20% Similarity=0.208 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.+++++...+ .+.+++.+|..... .++||+|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~------~~~~~~~~d~~~~~--~~~fD~I 265 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANG------VEGEVFASNVFSEV--KGRFDMI 265 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTT------CCCEEEECSTTTTC--CSCEEEE
T ss_pred CCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhC------CCCEEEEccccccc--cCCeeEE
Confidence 456799999999999999999884 45699999999999999999988755 24677888876533 5689999
Q ss_pred EecCCCCc-----------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 95 YLSTYVPE-----------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 95 ~~~~~~~~-----------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+++.+++. ++..+.++|+|||.+++.....
T Consensus 266 v~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 266 ISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp EECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred EECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 99988763 4578889999999999976544
No 166
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.50 E-value=4.7e-14 Score=118.17 Aligned_cols=105 Identities=21% Similarity=0.209 Sum_probs=86.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCcc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPFD 92 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D 92 (216)
..+|.+|||+|||+|..+..+++..+..+.|+++|+++.+++.+++++...+. . +.++.+|+..... ..++||
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~-----~-v~~~~~Da~~l~~~~~~~FD 172 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA-----P-LAVTQAPPRALAEAFGTYFH 172 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC-----C-CEEECSCHHHHHHHHCSCEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----e-EEEEECCHHHhhhhccccCC
Confidence 57899999999999999999999876557999999999999999999998773 4 8889888754321 246899
Q ss_pred EEEecCCC----------------------------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYV----------------------------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~----------------------------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|+++.+. ..++..+.++|||||++++++++.
T Consensus 173 ~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 173 RVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 99987663 124567789999999999987665
No 167
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.50 E-value=4.9e-14 Score=111.95 Aligned_cols=106 Identities=17% Similarity=0.061 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHh---CCCcEE--EEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEE--eccCCCCC--
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELV---GKTGRV--FGVEHMREQCEDAWETVMRIRPDLLNDGRLHLR--CRDGRTGL-- 85 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~---~~~~~v--~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~d~~~~~-- 85 (216)
.++.+|||||||+|.++..+++.+ .++..| +++|+|++|++.|++++.... +..++.+. .++.....
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~----~~~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS----NLENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS----SCTTEEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc----CCCcceEEEEecchhhhhhh
Confidence 456799999999998776444322 134544 999999999999999876521 12455544 44432211
Q ss_pred ----CCCCCccEEEecCCCCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 ----LHQAPFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ----~~~~~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
..+++||+|++...+++ .+++++++|||||++++...+.
T Consensus 127 ~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred hccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 23578999999999876 4689999999999999976543
No 168
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.50 E-value=3.7e-14 Score=109.38 Aligned_cols=97 Identities=15% Similarity=0.178 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHH---hCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC---C-CC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAEL---VGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG---L-LH 87 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~---~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~---~-~~ 87 (216)
.++.+|||+|||+|+.+..+++. ++++++|+++|+++.+++.|+. . ..+++++++|+... . ..
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~------~~~v~~~~gD~~~~~~l~~~~ 149 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D------MENITLHQGDCSDLTTFEHLR 149 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G------CTTEEEEECCSSCSGGGGGGS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c------CCceEEEECcchhHHHHHhhc
Confidence 35689999999999999999987 4556799999999999887761 1 26799999998753 2 22
Q ss_pred CCCccEEEecCCCCc---hHHHHHh-cCCCCeEEEEee
Q psy14962 88 QAPFDAIYLSTYVPE---IPYSILL-QLKPGGRLVCGV 121 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~---~~~~~~~-~L~~gG~lv~~~ 121 (216)
..+||+|+++..... .+..+.+ +|||||++++..
T Consensus 150 ~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 EMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred cCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 347999998776433 4567776 999999999954
No 169
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.49 E-value=3.5e-13 Score=113.20 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=87.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 91 (216)
..++.+|||+|||+|..+..+++..+..++|+++|+++.+++.+++++...+ ..++.++.+|+.... ..+++|
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~~f 331 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-----IKIVKPLVKDARKAPEIIGEEVA 331 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-----CCSEEEECSCTTCCSSSSCSSCE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-----CCcEEEEEcChhhcchhhccCCC
Confidence 5788999999999999999999986543699999999999999999998865 367999999987543 223679
Q ss_pred cEEEecCCC----------------------------CchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 92 DAIYLSTYV----------------------------PEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 92 D~i~~~~~~----------------------------~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
|+|+++.+. ..++..+.++|||||++++++++..
T Consensus 332 D~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 332 DKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 999986543 1246788899999999999877653
No 170
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.49 E-value=1.6e-13 Score=111.32 Aligned_cols=98 Identities=22% Similarity=0.277 Sum_probs=79.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++. + ..+|+|+|+++ +++.|++++...++ ..++.++.+|+.....+.++||+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~D~ 134 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKL----EDTITLIKGKIEEVHLPVEKVDV 134 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTC----TTTEEEEESCTTTSCCSCSCEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCC----CCcEEEEEeeHHHhcCCCCcEEE
Confidence 467899999999999999999887 2 34999999996 99999999887653 26899999998865555578999
Q ss_pred EEecCC---C------CchHHHHHhcCCCCeEEE
Q psy14962 94 IYLSTY---V------PEIPYSILLQLKPGGRLV 118 (216)
Q Consensus 94 i~~~~~---~------~~~~~~~~~~L~~gG~lv 118 (216)
|++... + ..++..+.++|||||.++
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 998762 2 124567789999999997
No 171
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.49 E-value=2.4e-13 Score=110.69 Aligned_cols=99 Identities=20% Similarity=0.164 Sum_probs=80.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++. +..+|+|+|++ ++++.|++++...+. .+++.++.+|+.....+.++||+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~fD~ 136 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKL----DHVVTIIKGKVEEVELPVEKVDI 136 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTC----TTTEEEEESCTTTCCCSSSCEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCC----CCcEEEEECcHHHccCCCCceEE
Confidence 457899999999999999999987 23599999999 599999999888664 35699999999876555678999
Q ss_pred EEecCCC---------CchHHHHHhcCCCCeEEEE
Q psy14962 94 IYLSTYV---------PEIPYSILLQLKPGGRLVC 119 (216)
Q Consensus 94 i~~~~~~---------~~~~~~~~~~L~~gG~lv~ 119 (216)
|++.... ..++..+.++|||||+++.
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 9986532 1245677899999999984
No 172
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.48 E-value=1.2e-13 Score=111.58 Aligned_cols=104 Identities=18% Similarity=0.101 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC----CCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH----QAP 90 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~ 90 (216)
.++.+|||+|||+|.++..+++. +++|+++|+|+.+++.|++++..+++. ..++.++++|+...... .++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~---~~~v~~i~~D~~~~l~~~~~~~~~ 225 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLE---QAPIRWICEDAMKFIQREERRGST 225 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCT---TSCEEEECSCHHHHHHHHHHHTCC
T ss_pred CCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC---ccceEEEECcHHHHHHHHHhcCCC
Confidence 46789999999999999999986 349999999999999999999887631 11489999997643321 457
Q ss_pred ccEEEecCCC----------------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 91 FDAIYLSTYV----------------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 91 ~D~i~~~~~~----------------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
||+|+++.+. ..++..+.++|+|||.+++.+...
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 9999998773 124577789999999987765443
No 173
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.48 E-value=8.5e-13 Score=103.92 Aligned_cols=101 Identities=19% Similarity=0.084 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCC---chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-------
Q psy14962 16 EGAKVLDIGSGS---GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL------- 85 (216)
Q Consensus 16 ~~~~vldiG~G~---G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 85 (216)
...+|||+|||+ |..+..+++. .++.+|+++|+|+.|++.|++++.. ..++.++.+|+....
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEECCTTCHHHHHHSHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEEeeCCCchhhhccch
Confidence 347999999999 9887655554 4567999999999999999998743 257999999986421
Q ss_pred ----CCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 ----LHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ----~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.+.++||+|++...+++ +++++.+.|+|||+|++.....
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 22247999999887765 4578899999999999987654
No 174
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.48 E-value=3.4e-13 Score=105.93 Aligned_cols=102 Identities=19% Similarity=0.105 Sum_probs=85.9
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+++|.+|||+|||+|.+++.+++.. ..+|+++|+++.+++.+++++..+++ .+++.++++|+.... ..+.||
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v----~~~v~~~~~D~~~~~-~~~~~D 194 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFP-GENIAD 194 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCC-CCSCEE
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEeCcHHHhc-cccCCC
Confidence 35789999999999999999999873 35999999999999999999998875 367999999987544 357899
Q ss_pred EEEecCCCC--chHHHHHhcCCCCeEEEEee
Q psy14962 93 AIYLSTYVP--EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 93 ~i~~~~~~~--~~~~~~~~~L~~gG~lv~~~ 121 (216)
.|+++.+.. .++..+.++|++||.+.+..
T Consensus 195 ~Vi~~~p~~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 195 RILMGYVVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp EEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCcHHHHHHHHHHHcCCCCEEEEEe
Confidence 999987653 46788889999999987743
No 175
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.47 E-value=2.4e-13 Score=99.53 Aligned_cols=91 Identities=18% Similarity=0.136 Sum_probs=74.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|.++..+++. . +|+|+|+|+.+++. . .+++++.+|+.... ..++||+|
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~------~--------~~~~~~~~d~~~~~-~~~~fD~i 82 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES------H--------RGGNLVRADLLCSI-NQESVDVV 82 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT------C--------SSSCEEECSTTTTB-CGGGCSEE
T ss_pred CCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc------c--------cCCeEEECChhhhc-ccCCCCEE
Confidence 46789999999999999999987 3 99999999999876 2 56889999987633 34789999
Q ss_pred EecCCCC---------------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 95 YLSTYVP---------------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 95 ~~~~~~~---------------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+++.++. ..+..+.+.+ |||.+++......
T Consensus 83 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~ 127 (170)
T 3q87_B 83 VFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN 127 (170)
T ss_dssp EECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG
T ss_pred EECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC
Confidence 9998875 2457777888 9999999775543
No 176
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.47 E-value=1.3e-12 Score=107.00 Aligned_cols=102 Identities=20% Similarity=0.162 Sum_probs=84.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|..+..+++.. |+.+++++|+ +.+++.|++++...++ .+++++..+|+.... +. .||+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l----~~~v~~~~~d~~~~~-p~-~~D~ 271 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGL----ADRCEILPGDFFETI-PD-GADV 271 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTTCC-CS-SCSE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCc----CCceEEeccCCCCCC-CC-CceE
Confidence 4567899999999999999999885 5679999999 9999999999887553 368999999987332 23 7999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|++...+++ +++++++.|+|||++++....
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999988754 567889999999999996543
No 177
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.47 E-value=3.8e-13 Score=109.43 Aligned_cols=100 Identities=21% Similarity=0.166 Sum_probs=79.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++...++ .+++.++.+|+..... .++||+
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l----~~~v~~~~~d~~~~~~-~~~~D~ 119 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNL----TDRIVVIPGKVEEVSL-PEQVDI 119 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTC----TTTEEEEESCTTTCCC-SSCEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCC----CCcEEEEEcchhhCCC-CCceeE
Confidence 457899999999999999999886 235999999996 88999998887653 2679999999876443 357999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 121 (216)
|++..+..+ .+..+.++|+|||.+++..
T Consensus 120 Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 120 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 999866432 3356689999999998654
No 178
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.47 E-value=1.5e-13 Score=115.03 Aligned_cols=106 Identities=21% Similarity=0.176 Sum_probs=87.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCcc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPFD 92 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D 92 (216)
..+|.+|||+|||+|..+..++...+..+.|+++|+++.+++.+++++.+.+. .++.++.+|...... ..++||
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~-----~nv~v~~~Da~~l~~~~~~~FD 177 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV-----SNAIVTNHAPAELVPHFSGFFD 177 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-----SSEEEECCCHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEeCCHHHhhhhccccCC
Confidence 57899999999999999999999876567999999999999999999998774 678899988754321 246799
Q ss_pred EEEecCCCC----------------------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVP----------------------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~----------------------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|+++.+.. .++..+.++|||||++++++++.
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 999987720 24577789999999999987765
No 179
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.46 E-value=2.2e-13 Score=112.31 Aligned_cols=104 Identities=19% Similarity=0.184 Sum_probs=81.2
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~ 91 (216)
..++|.+|||+|||+|.++..+++. ++.|+++|+|+.+++.|++++..+++ ..++.++|+..... ..+.|
T Consensus 211 ~~~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~------~~~~~~~D~~~~l~~~~~~f 281 (393)
T 4dmg_A 211 MVRPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGL------RVDIRHGEALPTLRGLEGPF 281 (393)
T ss_dssp TCCTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC------CCEEEESCHHHHHHTCCCCE
T ss_pred HhcCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCC------CCcEEEccHHHHHHHhcCCC
Confidence 3456999999999999999999986 34699999999999999999988764 23567888753221 12349
Q ss_pred cEEEecCCC---------------CchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 92 DAIYLSTYV---------------PEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 92 D~i~~~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
|+|+++.+. ..++..+.++|+|||++++...+..
T Consensus 282 D~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 282 HHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp EEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 999999875 2355777899999999997665553
No 180
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.46 E-value=9e-13 Score=106.42 Aligned_cols=103 Identities=20% Similarity=0.198 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|..+..+++.. ++.+++++|++ .+++.|++++...++ ..++++..+|+.....+ ..||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGV----ASRYHTIAGSAFEVDYG-NDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTC----GGGEEEEESCTTTSCCC-SCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCC----CcceEEEecccccCCCC-CCCcEE
Confidence 677899999999999999999885 45699999999 999999999877653 24699999998754333 349999
Q ss_pred EecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 95 YLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 95 ~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
++...+++ +++++.+.|+|||++++.....
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 99888764 4578889999999998876543
No 181
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.46 E-value=3.5e-13 Score=101.00 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=74.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-------
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGK-TGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL------- 85 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 85 (216)
+.++.+|||+|||+|.++..+++..++ +.+|+|+|+++.. . ..++.++.+|+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~-------~~~v~~~~~d~~~~~~~~~~~~ 83 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P-------IPNVYFIQGEIGKDNMNNIKNI 83 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C-------CTTCEEEECCTTTTSSCCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C-------CCCceEEEccccchhhhhhccc
Confidence 578899999999999999999988642 5799999999831 0 256889999987543
Q ss_pred ------------------CCCCCccEEEecCCCCc-----------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 ------------------LHQAPFDAIYLSTYVPE-----------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ------------------~~~~~~D~i~~~~~~~~-----------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
...++||+|+++...+. ++..+.++|+|||.+++.+...
T Consensus 84 ~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 84 NYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp --------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 23468999999876543 3466889999999999876554
No 182
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.45 E-value=1.9e-13 Score=99.91 Aligned_cols=97 Identities=19% Similarity=0.191 Sum_probs=78.0
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-------
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL------- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------- 85 (216)
.+.++.+|||+|||+|..+..+++..+++.+++++|+++ ++.. .++.+..+|+....
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~~~~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGVDFLQGDFRDELVMKALLE 82 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTEEEEESCTTSHHHHHHHHH
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcEEEEEcccccchhhhhhhc
Confidence 357889999999999999999999876667999999998 6421 46889999987543
Q ss_pred -CCCCCccEEEecCCCC-----------------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 86 -LHQAPFDAIYLSTYVP-----------------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
...++||+|+++.+++ .++..+.++|+|||.+++......
T Consensus 83 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred cCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 3456899999987753 356788899999999999776554
No 183
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.45 E-value=1.2e-12 Score=107.27 Aligned_cols=101 Identities=26% Similarity=0.181 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. ++.+++++|+ +.+++.|++++...++ ..++.++.+|+....+ . .||+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~-~-~~D~ 251 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGL----ADRVTVAEGDFFKPLP-V-TADV 251 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTSCCS-C-CEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCC----CCceEEEeCCCCCcCC-C-CCCE
Confidence 4678899999999999999999885 4679999999 9999999999887553 2479999999875332 2 4999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeec
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 122 (216)
|++...+++ +++++.++|+|||++++...
T Consensus 252 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 252 VLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999888754 46788899999999998765
No 184
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.45 E-value=2.8e-13 Score=111.28 Aligned_cols=100 Identities=23% Similarity=0.170 Sum_probs=81.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++.. ..+|+|+|++ .+++.|++++...++ .+++.++.+|+.....+ ++||+
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~D~ 132 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNL----DHIVEVIEGSVEDISLP-EKVDV 132 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTC----TTTEEEEESCGGGCCCS-SCEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCC----CCeEEEEECchhhcCcC-CcceE
Confidence 4678999999999999999999872 2399999999 999999999988664 35699999998765443 78999
Q ss_pred EEecCCCC---------chHHHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVP---------EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~---------~~~~~~~~~L~~gG~lv~~~ 121 (216)
|++..... .++..+.++|+|||.+++..
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 99965321 14577789999999998753
No 185
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.45 E-value=9.6e-13 Score=107.64 Aligned_cols=102 Identities=17% Similarity=0.165 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D 92 (216)
....+|||||||+|..+..+++.. |+.+++++|+ +.+++.|++++...++ ..++.++.+|+.... .+ ++||
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~p-~~~D 250 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSG----SERIHGHGANLLDRDVPFP-TGFD 250 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTT----GGGEEEEECCCCSSSCCCC-CCCS
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCc----ccceEEEEccccccCCCCC-CCcC
Confidence 356799999999999999999885 5679999999 9999999998876442 257999999987642 22 6799
Q ss_pred EEEecCCCCc--------hHHHHHhcCCCCeEEEEeecC
Q psy14962 93 AIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 93 ~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+|++...+++ +++++++.|+|||++++....
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 9999888864 467889999999999986543
No 186
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.45 E-value=2.7e-12 Score=104.80 Aligned_cols=103 Identities=15% Similarity=0.083 Sum_probs=84.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|..+..+++.. ++.+++++|+ +.+++.|++++...++ ..++.++.+|+.....+. +|+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~--~D~ 259 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGV----ADRMRGIAVDIYKESYPE--ADA 259 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTC----TTTEEEEECCTTTSCCCC--CSE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCC----CCCEEEEeCccccCCCCC--CCE
Confidence 4678899999999999999999885 4679999999 9999999999887553 256999999987654333 499
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++...+++ +++++.+.|+|||++++.....
T Consensus 260 v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 260 VLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 999888754 3578889999999998865443
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.45 E-value=7.4e-13 Score=106.87 Aligned_cols=99 Identities=24% Similarity=0.187 Sum_probs=79.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++. + ..+|+++|++ .+++.|++++...++ .+++.++.+|+.....+.++||+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~D~ 108 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGF----SDKITLLRGKLEDVHLPFPKVDI 108 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTC----TTTEEEEESCTTTSCCSSSCEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCC----CCCEEEEECchhhccCCCCcccE
Confidence 457889999999999999998886 2 3499999999 699999999887654 35799999998765555578999
Q ss_pred EEecCCCC---------chHHHHHhcCCCCeEEEE
Q psy14962 94 IYLSTYVP---------EIPYSILLQLKPGGRLVC 119 (216)
Q Consensus 94 i~~~~~~~---------~~~~~~~~~L~~gG~lv~ 119 (216)
|++..... .++..+.++|+|||.++.
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 99875421 244667799999999974
No 188
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.44 E-value=1.5e-12 Score=105.10 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|..+..+++.. |+.+++++|+ +.+++.|++++...++ ..++++..+|+.... +. +||+|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~-p~-~~D~v 239 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGL----SGRAQVVVGSFFDPL-PA-GAGGY 239 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTSCC-CC-SCSEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCc----CcCeEEecCCCCCCC-CC-CCcEE
Confidence 456799999999999999999885 4679999999 9999999999887553 368999999987332 22 79999
Q ss_pred EecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 95 YLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 95 ~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
++...+++ +++++++.|+|||++++.....
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 99988764 4578889999999999976544
No 189
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.43 E-value=3.9e-12 Score=104.38 Aligned_cols=102 Identities=14% Similarity=0.051 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--CCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--HQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~D 92 (216)
.++.+|||+| |+|.++..+++. ++..+|+++|+++.+++.|++++...++ .+++++.+|+..... ..++||
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~l~~~~~~~fD 243 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGY-----EDIEIFTFDLRKPLPDYALHKFD 243 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTC-----CCEEEECCCTTSCCCTTTSSCBS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCEEEEEChhhhhchhhccCCcc
Confidence 3688999999 999999999876 3446999999999999999999988763 489999999876332 245899
Q ss_pred EEEecCCCC-----chHHHHHhcCCCCe-EEEEeecC
Q psy14962 93 AIYLSTYVP-----EIPYSILLQLKPGG-RLVCGVGK 123 (216)
Q Consensus 93 ~i~~~~~~~-----~~~~~~~~~L~~gG-~lv~~~~~ 123 (216)
+|+++.++. .++..+.++|+||| .+++.+.+
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEec
Confidence 999998774 35688899999999 44666655
No 190
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.43 E-value=6e-13 Score=101.38 Aligned_cols=96 Identities=26% Similarity=0.356 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC--CCCCCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT--GLLHQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~D 92 (216)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++. .++..+|+.. ....+++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL------------DHVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS------------SEEEESCTTTCCCCSCTTCEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC------------CcEEEcchhhcCCCCCCCccC
Confidence 57889999999999999999887 3 59999999999998887531 3678888764 233457899
Q ss_pred EEEecCCCCc------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 93 AIYLSTYVPE------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 93 ~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+|++...+++ ++..+.++|+|||.+++.+++..
T Consensus 96 ~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp EEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred EEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 9999888755 45788899999999999877654
No 191
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.43 E-value=4.5e-13 Score=108.21 Aligned_cols=106 Identities=21% Similarity=0.208 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh--CCCCCCCCCeEEEeccCCCCC--CCCCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI--RPDLLNDGRLHLRCRDGRTGL--LHQAP 90 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~d~~~~~--~~~~~ 90 (216)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++... + +...+++++.+|+.... ...++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~g---l~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIG---YEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG---GGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccc---cCCCcEEEEECCHHHHHHhccCCC
Confidence 456899999999999999999873 3569999999999999999987642 1 11357999999975421 12468
Q ss_pred ccEEEecCCC----------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 91 FDAIYLSTYV----------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 91 ~D~i~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
||+|+++... ..+++.+.++|+|||.+++...++
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 9999997652 236689999999999999975444
No 192
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.43 E-value=2.3e-12 Score=105.11 Aligned_cols=102 Identities=23% Similarity=0.187 Sum_probs=84.0
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. ++.+++++|+ +.+++.|++++...++ ..++.++.+|+..... . .||+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~-~-~~D~ 252 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGL----SDRVDVVEGDFFEPLP-R-KADA 252 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTC----TTTEEEEECCTTSCCS-S-CEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCC----CCceEEEeCCCCCCCC-C-CccE
Confidence 4678899999999999999999885 4679999999 9999999999887553 2489999999875332 2 4999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|++...+++ +++++.++|+|||++++....
T Consensus 253 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 253 IILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999888754 567889999999999987554
No 193
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.41 E-value=1.2e-12 Score=106.94 Aligned_cols=97 Identities=29% Similarity=0.274 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.+|++|||||||+|.+++.+++.. ..+|+++|.++ ++..|++.+..+++ .+++.++.+|++....+ +++|+|
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~----~~~i~~i~~~~~~~~lp-e~~Dvi 153 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGL----EDRVHVLPGPVETVELP-EQVDAI 153 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTC----TTTEEEEESCTTTCCCS-SCEEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCC----CceEEEEeeeeeeecCC-ccccEE
Confidence 478999999999999998888763 23899999986 88999999888776 37899999998765443 579999
Q ss_pred EecCCC-----C----chHHHHHhcCCCCeEEEE
Q psy14962 95 YLSTYV-----P----EIPYSILLQLKPGGRLVC 119 (216)
Q Consensus 95 ~~~~~~-----~----~~~~~~~~~L~~gG~lv~ 119 (216)
++.... + .++....++|+|||.++-
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 984331 1 133555689999999864
No 194
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=1.1e-12 Score=103.28 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=84.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 93 (216)
..+.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+...+++++.+|+.... ...++||+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~-~~~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAG-KLDDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHT-TTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhcc-ccCCCceEEEECcHHHHHhhCCCCeeE
Confidence 356899999999999999998873 245999999999999999998754210 012368999999986422 12468999
Q ss_pred EEecCCCC----------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVP----------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++...+ .+++.+.+.|+|||.+++...++
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNP 192 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 99987652 46789999999999999986554
No 195
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.41 E-value=3.8e-12 Score=100.55 Aligned_cols=107 Identities=13% Similarity=0.128 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeC-CHHHHHHHHHHH-----HHhCCCCCCCCCeEEEeccCCCCC---
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEH-MREQCEDAWETV-----MRIRPDLLNDGRLHLRCRDGRTGL--- 85 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~-~~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~d~~~~~--- 85 (216)
.++.+|||+|||+|.++..+++. + ..+|+++|+ ++.+++.|++++ ...++......++.+...|.....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 57889999999999999988876 2 249999999 899999999998 332210000036778766644321
Q ss_pred C---CCCCccEEEecCCCCc------hHHHHHhcCC---C--CeEEEEeecC
Q psy14962 86 L---HQAPFDAIYLSTYVPE------IPYSILLQLK---P--GGRLVCGVGK 123 (216)
Q Consensus 86 ~---~~~~~D~i~~~~~~~~------~~~~~~~~L~---~--gG~lv~~~~~ 123 (216)
. ..++||+|++...+.+ +++.+.++|+ | ||.+++...+
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred HhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 1 2468999998666543 5688889999 9 9988775443
No 196
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.41 E-value=1.4e-12 Score=106.07 Aligned_cols=104 Identities=14% Similarity=0.072 Sum_probs=84.1
Q ss_pred CCC-CCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCc
Q psy14962 14 IQE-GAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPF 91 (216)
Q Consensus 14 ~~~-~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~ 91 (216)
+.+ +.+|||+|||+|..+..+++.. |+.+++++|+ +.+++.++++....+. ..++.++.+|+..... ..+.|
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~ 249 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDL----GGRVEFFEKNLLDARNFEGGAA 249 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTC----GGGEEEEECCTTCGGGGTTCCE
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCC----CCceEEEeCCcccCcccCCCCc
Confidence 345 7899999999999999999885 4679999999 8899999998877543 2579999999875431 24569
Q ss_pred cEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecC
Q psy14962 92 DAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 92 D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+|++...+++ +++++++.|+|||++++....
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 250 DVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 99999888764 457888999999999986543
No 197
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.41 E-value=6.8e-13 Score=105.61 Aligned_cols=108 Identities=19% Similarity=0.146 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 93 (216)
..+.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+...+++++.+|+.... ...++||+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSC-GFDDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHG-GGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhcc-ccCCCceEEEECcHHHHHhhCCCCceE
Confidence 356899999999999999999874 346999999999999999998754100 011368999999975322 22467999
Q ss_pred EEecCCCC-----------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVP-----------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~-----------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++...+ .+++.+.+.|+|||.+++...++
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 99876433 35689999999999999987654
No 198
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.41 E-value=7.1e-13 Score=105.83 Aligned_cols=106 Identities=22% Similarity=0.199 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh--CCCCCCCCCeEEEeccCCCCC-CCCCCc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI--RPDLLNDGRLHLRCRDGRTGL-LHQAPF 91 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~d~~~~~-~~~~~~ 91 (216)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++... + +...+++++.+|+.... ...++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~---~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIG---YSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG---GGCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcc---cCCCcEEEEECcHHHHHhhCCCCc
Confidence 456899999999999999999873 3469999999999999999987541 1 11368999999975321 234689
Q ss_pred cEEEecCCCC----------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLSTYVP----------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+|+++...+ .+++.+.++|+|||.+++....+
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 212 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQ 212 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCc
Confidence 9999876642 36789999999999999977443
No 199
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.40 E-value=5.9e-13 Score=109.63 Aligned_cols=102 Identities=22% Similarity=0.166 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC----CCCCc
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----HQAPF 91 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~ 91 (216)
++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..++. .++.++.+|+..... ...+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~-----~~~~~~~~d~~~~~~~~~~~~~~f 280 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGL-----GNVRVLEANAFDLLRRLEKEGERF 280 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTC-----TTEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEECCHHHHHHHHHhcCCCe
Confidence 7889999999999999999987 34999999999999999999988663 458999999764322 14689
Q ss_pred cEEEecCCC---------------CchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 92 DAIYLSTYV---------------PEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 92 D~i~~~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
|+|+++.+. ..++..+.++|+|||.+++++.+..
T Consensus 281 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 281 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred eEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 999998775 1245778899999999999887654
No 200
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.40 E-value=1.7e-12 Score=108.40 Aligned_cols=104 Identities=24% Similarity=0.336 Sum_probs=84.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 91 (216)
..++.+|||+|||+|..+..+++..+ +++|+++|+++.+++.+++++...+ .++.++.+|+.... ...++|
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g------~~~~~~~~D~~~~~~~~~~~~f 316 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLG------MKATVKQGDGRYPSQWCGEQQF 316 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTT------CCCEEEECCTTCTHHHHTTCCE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcC------CCeEEEeCchhhchhhcccCCC
Confidence 57889999999999999999999854 3699999999999999999998865 24788999987543 234679
Q ss_pred cEEEecCCCC----------------------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLSTYVP----------------------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~~~~~----------------------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+|+++.+.. .++..+.++|||||++++++++.
T Consensus 317 D~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 317 DRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9999876531 34577889999999999987655
No 201
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.40 E-value=1e-12 Score=111.09 Aligned_cols=100 Identities=21% Similarity=0.166 Sum_probs=79.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++...++ ..++.++.+|+..... .++||+
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl----~~~v~~~~~d~~~~~~-~~~fD~ 227 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNL----TDRIVVIPGKVEEVSL-PEQVDI 227 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTC----TTTEEEEESCTTTCCC-SSCEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCC----CCcEEEEECchhhCcc-CCCeEE
Confidence 356889999999999999988875 345999999998 99999999888664 3689999999876433 357999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 121 (216)
|++..+... .+..+.++|+|||.+++..
T Consensus 228 Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 228 IISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999776332 2345679999999998643
No 202
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.40 E-value=7.3e-13 Score=109.14 Aligned_cols=105 Identities=16% Similarity=0.057 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCC-CeEEEeccCCCCCC----CCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDG-RLHLRCRDGRTGLL----HQA 89 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~----~~~ 89 (216)
.++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.|++++..+++ .. ++.++.+|+..... ...
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~----~~~~v~~~~~D~~~~l~~~~~~~~ 284 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHL----DMANHQLVVMDVFDYFKYARRHHL 284 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTC----CCTTEEEEESCHHHHHHHHHHTTC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECCHHHHHHHHHHhCC
Confidence 578899999999999999999862 23899999999999999999988763 12 79999999764221 135
Q ss_pred CccEEEecCCCC-----c----------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 90 PFDAIYLSTYVP-----E----------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 90 ~~D~i~~~~~~~-----~----------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+||+|+++.+.. . ++..+.++|+|||.+++++.+..
T Consensus 285 ~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 285 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 799999987762 1 23456799999999999887664
No 203
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.40 E-value=2.4e-13 Score=107.48 Aligned_cols=106 Identities=21% Similarity=0.182 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCC-------CCCCeEEEeccCCCCCCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLL-------NDGRLHLRCRDGRTGLLH 87 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~ 87 (216)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.|++++ ... ..+ ...+++++.+|+......
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~-~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KID-NGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTT-TTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhc-cccccccccCCCCcEEEEECchHHHhcc
Confidence 45789999999999999999987 3569999999999999999987 320 001 136799999997532111
Q ss_pred CCCccEEEecCCC----------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 88 QAPFDAIYLSTYV----------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 88 ~~~~D~i~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.++||+|+++.+. ..+++.+.++|+|||.+++...++
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 4679999998764 235688999999999999976544
No 204
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.40 E-value=5.4e-13 Score=106.57 Aligned_cols=108 Identities=22% Similarity=0.183 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--CCCCcc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--HQAPFD 92 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~D 92 (216)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++..... .....+++++.+|+..... ..++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISR-SLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHG-GGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhc-ccCCCcEEEEECcHHHHHHhccCCcee
Confidence 567899999999999999999863 346999999999999999988642100 0113679999999764332 356899
Q ss_pred EEEecCCCC----------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 93 AIYLSTYVP----------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+|+++...+ .+++.+.++|+|||++++...++
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 213 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI 213 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 999977542 35688999999999999987654
No 205
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.40 E-value=2.4e-12 Score=103.99 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=82.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.+ .+|||+|||+|..+..+++.. ++.+++++|+ +.+++.|++++...++ ..++.++.+|+.... + ++||+
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~-~-~~~D~ 236 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLA----GERVSLVGGDMLQEV-P-SNGDI 236 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHH----TTSEEEEESCTTTCC-C-SSCSE
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCC----CCcEEEecCCCCCCC-C-CCCCE
Confidence 344 899999999999999999885 4669999999 9999999988765432 257999999987632 2 57999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|++...+++ +++++++.|+|||++++....
T Consensus 237 v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 237 YLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 999988863 567889999999999997543
No 206
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.40 E-value=2.1e-12 Score=101.41 Aligned_cols=105 Identities=21% Similarity=0.268 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCCch----HHHHHHHHhCC---CcEEEEEeCCHHHHHHHHHHHHHh----CC------------CCC-C-
Q psy14962 16 EGAKVLDIGSGSGF----MSCVFAELVGK---TGRVFGVEHMREQCEDAWETVMRI----RP------------DLL-N- 70 (216)
Q Consensus 16 ~~~~vldiG~G~G~----~~~~l~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~----~~------------~~~-~- 70 (216)
++.+|+|+|||||. +++.+++..+. +.+|+|+|+|+.+++.|++..... ++ ... .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45789999999998 56666666442 359999999999999999863100 00 000 0
Q ss_pred --------CCCeEEEeccCCCCCCC-CCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEEe
Q psy14962 71 --------DGRLHLRCRDGRTGLLH-QAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 71 --------~~~~~~~~~d~~~~~~~-~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~ 120 (216)
..++.|...|+.....+ .++||+|+|...+.+ ++..+.+.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 03689999998764322 468999999888743 457888999999999884
No 207
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.39 E-value=7.9e-13 Score=102.79 Aligned_cols=81 Identities=12% Similarity=0.029 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC---CCC---CC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG---LLH---QA 89 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~---~~ 89 (216)
++.+|||+|||+|.++..+++.. ++.+|+++|+++.+++.|++++...++ ..++.++.+|+... ... ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNL----SDLIKVVKVPQKTLLMDALKEESEI 139 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTCSSTTTSTTCCSC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCC----CccEEEEEcchhhhhhhhhhcccCC
Confidence 57799999999999999988875 246999999999999999999988653 24599999996541 222 25
Q ss_pred CccEEEecCCCC
Q psy14962 90 PFDAIYLSTYVP 101 (216)
Q Consensus 90 ~~D~i~~~~~~~ 101 (216)
+||+|+++.++.
T Consensus 140 ~fD~i~~npp~~ 151 (254)
T 2h00_A 140 IYDFCMCNPPFF 151 (254)
T ss_dssp CBSEEEECCCCC
T ss_pred cccEEEECCCCc
Confidence 799999997754
No 208
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.39 E-value=1.8e-12 Score=102.66 Aligned_cols=89 Identities=19% Similarity=0.186 Sum_probs=70.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. +.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++....+. ..+++++.+|+.
T Consensus 17 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~D~~ 87 (285)
T 1zq9_A 17 INSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPV----ASKLQVLVGDVL 87 (285)
T ss_dssp HHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTT----GGGEEEEESCTT
T ss_pred HHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEEccee
Confidence 455666654 567889999999999999999988 34999999999999999998764321 147999999987
Q ss_pred CCCCCCCCccEEEecCCCCc
Q psy14962 83 TGLLHQAPFDAIYLSTYVPE 102 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~ 102 (216)
.... ..||+|+++.++..
T Consensus 88 ~~~~--~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 88 KTDL--PFFDTCVANLPYQI 105 (285)
T ss_dssp TSCC--CCCSEEEEECCGGG
T ss_pred cccc--hhhcEEEEecCccc
Confidence 5433 36999999887654
No 209
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=4.3e-13 Score=107.02 Aligned_cols=101 Identities=24% Similarity=0.248 Sum_probs=80.5
Q ss_pred CeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCccEEE
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPFDAIY 95 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~i~ 95 (216)
.+|||||||+|.++..+++.. ++.+++++|+++.+++.|++++... ...+++++.+|+.... ...++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~-----~~~rv~v~~~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIP-----RAPRVKIRVDDARMVAESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCC-----CTTTEEEEESCHHHHHHTCCTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhcccc-----CCCceEEEECcHHHHHhhccCCCCCEEE
Confidence 499999999999999999864 4569999999999999999986431 1368999999986432 2346899999
Q ss_pred ecCCCC----------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 96 LSTYVP----------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 96 ~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
++...+ .+++.++++|+|||++++.....
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 975432 35689999999999999987643
No 210
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.38 E-value=1.8e-12 Score=104.98 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=84.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++.. ++. ..+|+++|+++.+++.|++++..+++ ..++.++.+|+.... ++||+
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l----~~~v~~~~~D~~~~~---~~fD~ 261 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKL----EHKIIPILSDVREVD---VKGNR 261 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCGGGCC---CCEEE
T ss_pred cCCCCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECChHHhc---CCCcE
Confidence 46789999999999999999 772 45999999999999999999988663 257999999987654 67999
Q ss_pred EEecCCC--CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYV--PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~--~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.+. ..++..+.++|+|||.+++....+
T Consensus 262 Vi~dpP~~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 262 VIMNLPKFAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EEECCTTTGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred EEECCcHhHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 9998664 347788999999999998876554
No 211
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.38 E-value=1.3e-12 Score=106.50 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=80.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+....+|+|+|||+|..+..++++. |+.+++..|. |.+++.|+++....+ .++++++.+|+...+.+ .+|+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~-----~~rv~~~~gD~~~~~~~--~~D~ 247 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQE-----EEQIDFQEGDFFKDPLP--EADL 247 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTTSCCC--CCSE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcc-----cCceeeecCccccCCCC--CceE
Confidence 4566799999999999999999985 5678898997 889998988765432 47899999998755433 4799
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeec
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 122 (216)
+++...++. +++++++.|+|||++++...
T Consensus 248 ~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 248 YILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 999988865 46888999999999998653
No 212
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.38 E-value=4.3e-12 Score=100.57 Aligned_cols=91 Identities=15% Similarity=0.135 Sum_probs=74.6
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
++..+++.+. +.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++.. ..+++++++|+
T Consensus 38 i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~-------~~~v~vi~gD~ 105 (295)
T 3gru_A 38 FVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKEL-------YNNIEIIWGDA 105 (295)
T ss_dssp HHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHH-------CSSEEEEESCT
T ss_pred HHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhcc-------CCCeEEEECch
Confidence 3456666664 578899999999999999999988 35999999999999999998864 36899999999
Q ss_pred CCCCCCCCCccEEEecCCCCchH
Q psy14962 82 RTGLLHQAPFDAIYLSTYVPEIP 104 (216)
Q Consensus 82 ~~~~~~~~~~D~i~~~~~~~~~~ 104 (216)
........+||.|+++.++....
T Consensus 106 l~~~~~~~~fD~Iv~NlPy~is~ 128 (295)
T 3gru_A 106 LKVDLNKLDFNKVVANLPYQISS 128 (295)
T ss_dssp TTSCGGGSCCSEEEEECCGGGHH
T ss_pred hhCCcccCCccEEEEeCcccccH
Confidence 86555556799999998876543
No 213
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.37 E-value=1.3e-12 Score=107.15 Aligned_cols=101 Identities=11% Similarity=0.062 Sum_probs=82.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---CCC-----
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL---LHQ----- 88 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~----- 88 (216)
+.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..+++ .++.++.+|+.... ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~-----~~v~~~~~d~~~~~~~~~~~~~~~~ 285 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHI-----DNVQIIRMAAEEFTQAMNGVREFNR 285 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTC-----CSEEEECCCSHHHHHHHSSCCCCTT
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECCHHHHHHHHhhcccccc
Confidence 678999999999999998875 34999999999999999999988663 68999999975321 111
Q ss_pred --------CCccEEEecCCCCchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 89 --------APFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 89 --------~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
.+||+|+++.+...+...+.+.|+++|.+++...++.
T Consensus 286 l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~~~g~ivyvsc~p~ 330 (369)
T 3bt7_A 286 LQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPE 330 (369)
T ss_dssp GGGSCGGGCCEEEEEECCCTTCCCHHHHHHHTTSSEEEEEESCHH
T ss_pred ccccccccCCCCEEEECcCccccHHHHHHHHhCCCEEEEEECCHH
Confidence 3799999999887677778888889998888776664
No 214
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.37 E-value=1.1e-12 Score=108.41 Aligned_cols=105 Identities=22% Similarity=0.240 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC----CCCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----HQAP 90 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~ 90 (216)
+++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|++++..+++ ..++.++.+|+..... ..++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~----~~~v~~~~~d~~~~~~~~~~~~~~ 289 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGV----EDRMKFIVGSAFEEMEKLQKKGEK 289 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCC----CccceEEECCHHHHHHHHHhhCCC
Confidence 47899999999999999999986 2 34999999999999999999988663 1279999999764322 2467
Q ss_pred ccEEEecCCCC---------------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 91 FDAIYLSTYVP---------------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 91 ~D~i~~~~~~~---------------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
||+|+++.+.. .++..+.++|+|||.+++.+.+..
T Consensus 290 fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 290 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 99999987751 245778899999999988877653
No 215
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.37 E-value=8.7e-12 Score=103.83 Aligned_cols=99 Identities=20% Similarity=0.193 Sum_probs=80.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..+++ . +.++.+|+...... +||+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl-----~-v~~~~~d~~~~~~~--~fD~ 356 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNV-----D-AEFEVASDREVSVK--GFDT 356 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC-----C-EEEEECCTTTCCCT--TCSE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC-----c-EEEEECChHHcCcc--CCCE
Confidence 467889999999999999999986 34999999999999999999987663 4 89999998765432 7999
Q ss_pred EEecCCCCc----hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE----IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~----~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.+... +++.+ +.|+|+|.+++++...
T Consensus 357 Vv~dPPr~g~~~~~~~~l-~~l~p~givyvsc~p~ 390 (425)
T 2jjq_A 357 VIVDPPRAGLHPRLVKRL-NREKPGVIVYVSCNPE 390 (425)
T ss_dssp EEECCCTTCSCHHHHHHH-HHHCCSEEEEEESCHH
T ss_pred EEEcCCccchHHHHHHHH-HhcCCCcEEEEECChH
Confidence 999988532 33444 4589999999987544
No 216
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.37 E-value=1.7e-12 Score=106.48 Aligned_cols=104 Identities=17% Similarity=0.062 Sum_probs=81.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|.++..+++.. +.++|+|+|+++.+++.|++++...++ .+++.+..+|+.......++||+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl----~~~i~~~~~D~~~~~~~~~~fD~ 289 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGV----LDKIKFIQGDATQLSQYVDSVDF 289 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTC----GGGCEEEECCGGGGGGTCSCEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCC----CCceEEEECChhhCCcccCCcCE
Confidence 4678999999999999999999873 334899999999999999999988663 25799999998866555578999
Q ss_pred EEecCCCCc--------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPE--------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~--------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.++.. +++.+.++| +|.+++.+.++
T Consensus 290 Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~ 332 (373)
T 3tm4_A 290 AISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEK 332 (373)
T ss_dssp EEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCH
T ss_pred EEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCH
Confidence 999888532 346677777 56665555544
No 217
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.37 E-value=1.4e-13 Score=105.86 Aligned_cols=110 Identities=17% Similarity=0.178 Sum_probs=68.5
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe-ccCCC
Q psy14962 5 RIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC-RDGRT 83 (216)
Q Consensus 5 ~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~ 83 (216)
.+++.+.. ..++.+|||+|||+|.++..+++. + ..+|+|+|+|+.|++.++++...... ....++.+.. .|...
T Consensus 27 ~~L~~~~~-~~~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~~~~~--~~~~~~~~~~~~~~~~ 101 (232)
T 3opn_A 27 KALKEFHL-EINGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDERVVV--MEQFNFRNAVLADFEQ 101 (232)
T ss_dssp HHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCTTEEE--ECSCCGGGCCGGGCCS
T ss_pred HHHHHcCC-CCCCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCccccc--cccceEEEeCHhHcCc
Confidence 44444432 235679999999999999999987 2 24999999999999987664221000 0001222222 22211
Q ss_pred CCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 84 GLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.......||+++++. ..++..+.++|||||.+++.+
T Consensus 102 ~~~d~~~~D~v~~~l--~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 102 GRPSFTSIDVSFISL--DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEEEEEhhhH--HHHHHHHHHhccCCCEEEEEE
Confidence 111223455544432 667899999999999999865
No 218
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.37 E-value=1e-12 Score=105.31 Aligned_cols=108 Identities=21% Similarity=0.129 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 93 (216)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+...+++++.+|+.... ...++||+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~-~~~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSC-GFSHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSG-GGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhcc-ccCCCCEEEEEChHHHHHHhcCCCceE
Confidence 456899999999999999999873 356999999999999999998754200 011367999999975422 13568999
Q ss_pred EEecCCC----------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYV----------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++... ..+++.+.++|+|||.+++...++
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESV 225 (314)
T ss_dssp EEECCC-------------HHHHHHHHEEEEEEEEEECCCT
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCc
Confidence 9987742 346789999999999999976444
No 219
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.37 E-value=1.5e-11 Score=98.28 Aligned_cols=105 Identities=16% Similarity=0.090 Sum_probs=82.4
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC---CCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH---QAP 90 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~ 90 (216)
+.+|.+|||+|||+|..+..+++.+++.+.|+++|+++.+++.+++++.+.+ ..++.++.+|+...... ..+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-----~~~v~~~~~D~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-----VSCCELAEEDFLAVSPSDPRYHE 174 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCGGGSCTTCGGGTT
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCeEEEEeCChHhcCccccccCC
Confidence 5789999999999999999999987656799999999999999999998866 36899999998654322 157
Q ss_pred ccEEEecCCCC--------------------c----------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 91 FDAIYLSTYVP--------------------E----------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 91 ~D~i~~~~~~~--------------------~----------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
||.|+++.+.. . ++..+.++++ ||++++++.+.
T Consensus 175 fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 175 VHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 99999865530 0 2334445676 99999877665
No 220
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.36 E-value=8.2e-12 Score=104.40 Aligned_cols=111 Identities=20% Similarity=0.234 Sum_probs=85.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. ..++.+|||+|||+|.++..+++. ..+|+|+|+++.+++.|++++..+++ .++.++.+|+.
T Consensus 275 ~~~~~~~l~--~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~-----~~v~f~~~d~~ 344 (433)
T 1uwv_A 275 VARALEWLD--VQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGL-----QNVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHT--CCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCTT
T ss_pred HHHHHHhhc--CCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEECCHH
Confidence 344555553 457789999999999999999987 45999999999999999999988663 58999999987
Q ss_pred CCCC----CCCCccEEEecCCCCch---HHHHHhcCCCCeEEEEeecCC
Q psy14962 83 TGLL----HQAPFDAIYLSTYVPEI---PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 83 ~~~~----~~~~~D~i~~~~~~~~~---~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.... ..++||+|+++.+.... .+.+. .++|++.+++++...
T Consensus 345 ~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~l~-~~~p~~ivyvsc~p~ 392 (433)
T 1uwv_A 345 EDVTKQPWAKNGFDKVLLDPARAGAAGVMQQII-KLEPIRIVYVSCNPA 392 (433)
T ss_dssp SCCSSSGGGTTCCSEEEECCCTTCCHHHHHHHH-HHCCSEEEEEESCHH
T ss_pred HHhhhhhhhcCCCCEEEECCCCccHHHHHHHHH-hcCCCeEEEEECChH
Confidence 5332 24679999999886543 33333 368999888877543
No 221
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.36 E-value=1.1e-12 Score=108.42 Aligned_cols=106 Identities=20% Similarity=0.098 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC----CCCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----HQAP 90 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~ 90 (216)
.++.+|||+|||+|.++..+++.. ..+|+++|+++.+++.|++++..+++. ..++.++.+|+..... ...+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~---~~~v~~~~~D~~~~~~~~~~~~~~ 293 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLD---LSKAEFVRDDVFKLLRTYRDRGEK 293 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCC---ccceEEEECCHHHHHHHHHhcCCC
Confidence 578899999999999999999862 349999999999999999999876520 1278999999764322 1457
Q ss_pred ccEEEecCCC---------------CchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 91 FDAIYLSTYV---------------PEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 91 ~D~i~~~~~~---------------~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
||+|+++.+. ..++..+.+.|+|||++++++.+..
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 9999999765 1245678899999999999887654
No 222
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.36 E-value=9.5e-14 Score=115.54 Aligned_cols=98 Identities=17% Similarity=0.158 Sum_probs=73.1
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCe-E-EEeccCCCCCCCCCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRL-H-LRCRDGRTGLLHQAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~-~-~~~~d~~~~~~~~~~~ 91 (216)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++ +. ... . +...+.......+++|
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~-----~~~~~~~~~~~~~~l~~~~~~f 172 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GI-----RVRTDFFEKATADDVRRTEGPA 172 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TC-----CEECSCCSHHHHHHHHHHHCCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CC-----CcceeeechhhHhhcccCCCCE
Confidence 457889999999999999999886 45999999999999988765 11 111 0 1111211111234789
Q ss_pred cEEEecCCCCc------hHHHHHhcCCCCeEEEEeecC
Q psy14962 92 DAIYLSTYVPE------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 92 D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+|++...+++ +++.+.++|||||++++.+++
T Consensus 173 D~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 173 NVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99999999876 468999999999999998765
No 223
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.35 E-value=1.4e-12 Score=104.61 Aligned_cols=108 Identities=21% Similarity=0.220 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 93 (216)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+...+...+++++.+|+.... ...++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 456899999999999999999874 3469999999999999999987541100001267999999976422 13568999
Q ss_pred EEecCCCCc-------------hHHHHHhcCCCCeEEEEeecC
Q psy14962 94 IYLSTYVPE-------------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 94 i~~~~~~~~-------------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+++...+. +++.+.++|+|||.+++...+
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 999866533 468899999999999997644
No 224
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.35 E-value=5.4e-12 Score=99.55 Aligned_cols=96 Identities=19% Similarity=0.120 Sum_probs=69.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEE-eccCCCCC---CCCCCc
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLR-CRDGRTGL---LHQAPF 91 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~d~~~~~---~~~~~~ 91 (216)
++.+|||+|||||.++..+++.. ..+|+|+|+++.|++.+.+. ..++... ..++.... .+..+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~----------~~rv~~~~~~ni~~l~~~~l~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQ----------DDRVRSMEQYNFRYAEPVDFTEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHT----------CTTEEEECSCCGGGCCGGGCTTCCC
T ss_pred cccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHh----------CcccceecccCceecchhhCCCCCC
Confidence 57899999999999999888872 34999999999999875432 1233222 22322111 123459
Q ss_pred cEEEecCCCCc---hHHHHHhcCCCCeEEEEeecC
Q psy14962 92 DAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 92 D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+|+++..+.+ ++..+.++|+|||.+++.+.+
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~lvkP 187 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKILVDGGQVVALVKP 187 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEEEECG
T ss_pred CEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEEECc
Confidence 99998877654 678999999999999997533
No 225
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.34 E-value=7.4e-12 Score=101.65 Aligned_cols=103 Identities=19% Similarity=0.143 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCC----cEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKT----GRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAP 90 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 90 (216)
.++.+|||+|||+|.++..+++..... .+++|+|+++.+++.|+.++...+ .++.+..+|..... ..++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g------~~~~i~~~D~l~~~-~~~~ 201 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR------QKMTLLHQDGLANL-LVDP 201 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT------CCCEEEESCTTSCC-CCCC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC------CCceEEECCCCCcc-ccCC
Confidence 456799999999999999998876322 689999999999999999887765 26889999976533 3467
Q ss_pred ccEEEecCCCCc------------------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 91 FDAIYLSTYVPE------------------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 91 ~D~i~~~~~~~~------------------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
||+|+++.++.. ++..+.+.|+|||++++.+++.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 999999988522 4677889999999999987543
No 226
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.34 E-value=1.2e-12 Score=103.46 Aligned_cols=108 Identities=19% Similarity=0.129 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~ 93 (216)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.|++++...+. .+...+++++.+|+..... ..++||+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISC-GYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSG-GGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhcc-ccCCCcEEEEECChHHHHHhCCCCceE
Confidence 456899999999999999998763 346999999999999999998653210 0113679999999764221 2567999
Q ss_pred EEecCCC----------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYV----------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++... ..+++.+.+.|+|||.+++...++
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 9996542 245688999999999999986654
No 227
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.34 E-value=3.1e-12 Score=95.31 Aligned_cols=96 Identities=23% Similarity=0.228 Sum_probs=72.7
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCC--------cEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEE-eccCCC
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKT--------GRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLR-CRDGRT 83 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~--------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~d~~~ 83 (216)
.+.++.+|||+|||+|.++..+++..+.. .+|+++|+++.. . ..++.++ .+|+..
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~-----~~~~~~~~~~d~~~ 82 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P-----LEGATFLCPADVTD 82 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C-----CTTCEEECSCCTTS
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c-----CCCCeEEEeccCCC
Confidence 35789999999999999999999986532 699999999831 0 2467888 888653
Q ss_pred CC--------CCCCCccEEEecCCCC-----------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 84 GL--------LHQAPFDAIYLSTYVP-----------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 84 ~~--------~~~~~~D~i~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.. ..+++||+|+++...+ .++..+.++|+|||.+++.....
T Consensus 83 ~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 83 PRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 21 1235799999976432 34577889999999999986654
No 228
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.34 E-value=1.8e-12 Score=101.26 Aligned_cols=103 Identities=10% Similarity=-0.027 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
..+.+|||+|||+|..+..+++. + .+|+++|+++.+++.|++++..... .+...+++++.+|+.... ++||+|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~-~~~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHH-HHTCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhcc-ccCCCeEEEEechHHHHH---hhCCEE
Confidence 35679999999999999999887 4 5999999999999999876532100 011357999999987544 679999
Q ss_pred EecCCCCc-hHHHHHhcCCCCeEEEEeecCC
Q psy14962 95 YLSTYVPE-IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 95 ~~~~~~~~-~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+++...+. +++.+.+.|+|||.+++...++
T Consensus 144 i~d~~dp~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 144 FCLQEPDIHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp EESSCCCHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred EECCCChHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 99865544 5789999999999999976555
No 229
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.34 E-value=1.4e-12 Score=104.81 Aligned_cols=108 Identities=19% Similarity=0.128 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 93 (216)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++..... .+...+++++.+|+.... ...++||+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~-~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISC-GYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSG-GGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhcc-ccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 456899999999999999999863 356999999999999999998654100 011357999999975322 12467999
Q ss_pred EEecCCC----------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYV----------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~----------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++... ..+++.+.+.|+|||.+++...++
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 9987632 245688999999999999976554
No 230
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.33 E-value=1e-12 Score=113.43 Aligned_cols=98 Identities=19% Similarity=0.216 Sum_probs=77.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--CCCCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--LHQAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~ 91 (216)
+..+.+|||||||.|.++..+|+. ++.|+|+|.++.+++.|+.++...+ ..++++.+++++... ...++|
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~f 135 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENP-----DFAAEFRVGRIEEVIAALEEGEF 135 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTST-----TSEEEEEECCHHHHHHHCCTTSC
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcC-----CCceEEEECCHHHHhhhccCCCc
Confidence 456789999999999999999998 5699999999999999999987744 247999999986432 235689
Q ss_pred cEEEecCCCCchH--------HHHHhcCCCCeEEEE
Q psy14962 92 DAIYLSTYVPEIP--------YSILLQLKPGGRLVC 119 (216)
Q Consensus 92 D~i~~~~~~~~~~--------~~~~~~L~~gG~lv~ 119 (216)
|+|+|..+++++. ..+.+.|+++|..++
T Consensus 136 D~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 136 DLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp SEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred cEEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 9999999998854 244455777665544
No 231
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.32 E-value=1.8e-12 Score=105.91 Aligned_cols=96 Identities=20% Similarity=0.214 Sum_probs=74.7
Q ss_pred CCCCCeEEEEcCC------CchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC
Q psy14962 14 IQEGAKVLDIGSG------SGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH 87 (216)
Q Consensus 14 ~~~~~~vldiG~G------~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (216)
..++.+||||||| +|..+..+++...++++|+|+|+++.|.. . ..+++++++|+......
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~-------~-------~~rI~fv~GDa~dlpf~ 279 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV-------D-------ELRIRTIQGDQNDAEFL 279 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG-------C-------BTTEEEEECCTTCHHHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh-------c-------CCCcEEEEecccccchh
Confidence 3567899999999 77778888776556779999999999731 1 36899999998754332
Q ss_pred ------CCCccEEEecCCCC-----chHHHHHhcCCCCeEEEEeecC
Q psy14962 88 ------QAPFDAIYLSTYVP-----EIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 88 ------~~~~D~i~~~~~~~-----~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
.++||+|+++.... ..++++.++|||||++++....
T Consensus 280 ~~l~~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 280 DRIARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhhcccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 47899999976532 1468899999999999997655
No 232
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.32 E-value=2.7e-12 Score=95.73 Aligned_cols=93 Identities=14% Similarity=0.206 Sum_probs=71.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
++++.+|||+|||+|.++..+++. +++|+|+|+++.. . ..++.++.+|+.....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~-----~~~v~~~~~D~~~~~~~~~~~~~ 83 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------E-----IAGVRFIRCDIFKETIFDDIDRA 83 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------C-----CTTCEEEECCTTSSSHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------c-----CCCeEEEEccccCHHHHHHHHHH
Confidence 578999999999999999999887 4599999998741 0 2578999999875431
Q ss_pred -C---CCCccEEEecCCCC-----------------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 87 -H---QAPFDAIYLSTYVP-----------------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 87 -~---~~~~D~i~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
. .++||+|+++.+.. .++..+.++|||||.|++.+....
T Consensus 84 ~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 84 LREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred hhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 0 13899999986531 134567799999999999776553
No 233
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.31 E-value=1e-11 Score=96.89 Aligned_cols=102 Identities=22% Similarity=0.166 Sum_probs=76.6
Q ss_pred CeEEEEcCCC--chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---C-C--CC
Q psy14962 18 AKVLDIGSGS--GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL---L-H--QA 89 (216)
Q Consensus 18 ~~vldiG~G~--G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~-~--~~ 89 (216)
..|||+|||+ +..+..+++...|+++|+++|.|+.|++.|++++.... ..++.++.+|+.... . . .+
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-----~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-----EGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-----SSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-----CCcEEEEEecccChhhhhccccccc
Confidence 6899999997 44556666666678899999999999999998875421 247899999987531 0 0 23
Q ss_pred Ccc-----EEEecCCCCc---------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 90 PFD-----AIYLSTYVPE---------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 90 ~~D-----~i~~~~~~~~---------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.|| .|+++..+++ ++..+.+.|+|||+|+++....
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 455 5778887765 3467788999999999986654
No 234
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.31 E-value=5.1e-12 Score=111.30 Aligned_cols=105 Identities=17% Similarity=0.077 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 93 (216)
.+|.+|||+|||+|.+++.+++.. ..+|+++|+|+.+++.|++++..+++ ...++.++++|+.... ...++||+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl---~~~~v~~i~~D~~~~l~~~~~~fD~ 612 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGL---TGRAHRLIQADCLAWLREANEQFDL 612 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC---CSTTEEEEESCHHHHHHHCCCCEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCC---CccceEEEecCHHHHHHhcCCCccE
Confidence 468999999999999999988752 24799999999999999999988764 1247999999986422 12468999
Q ss_pred EEecCCCC-----------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVP-----------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+++.+.- .++..+.++|+|||++++++...
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp EEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred EEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 99988741 13577889999999999988764
No 235
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.30 E-value=9.5e-12 Score=101.15 Aligned_cols=98 Identities=14% Similarity=0.048 Sum_probs=74.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. ++.+++++|+ +.++. +++....+. ..++.++.+|+.... + +||+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~~----~~~v~~~~~d~~~~~-p--~~D~ 250 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPDV----AGRWKVVEGDFLREV-P--HADV 250 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGGG----TTSEEEEECCTTTCC-C--CCSE
T ss_pred ccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccCC----CCCeEEEecCCCCCC-C--CCcE
Confidence 4678899999999999999999885 4678999999 44443 222221111 357999999986332 2 7999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeec
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 122 (216)
|++...+++ +++++++.|||||++++...
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 999988864 46788999999999998654
No 236
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.29 E-value=1.4e-11 Score=98.06 Aligned_cols=89 Identities=17% Similarity=0.197 Sum_probs=67.9
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. +.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++...+ ..++.++.+|+.
T Consensus 31 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~-----~~~v~~~~~D~~ 100 (299)
T 2h1r_A 31 LDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEG-----YNNLEVYEGDAI 100 (299)
T ss_dssp HHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTT-----CCCEEC----CC
T ss_pred HHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEECchh
Confidence 455666654 567899999999999999999887 3599999999999999999887644 267999999987
Q ss_pred CCCCCCCCccEEEecCCCCch
Q psy14962 83 TGLLHQAPFDAIYLSTYVPEI 103 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~~~ 103 (216)
.... .+||+|+++.+....
T Consensus 101 ~~~~--~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 101 KTVF--PKFDVCTANIPYKIS 119 (299)
T ss_dssp SSCC--CCCSEEEEECCGGGH
T ss_pred hCCc--ccCCEEEEcCCcccc
Confidence 5433 479999998887553
No 237
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.27 E-value=2.6e-11 Score=99.18 Aligned_cols=93 Identities=14% Similarity=0.078 Sum_probs=75.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||||||+|..+..+++.. |+.+++++|+ +.+++.|++ ..+++++.+|+.. ..+.+ |+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~D~~~-~~p~~--D~ 262 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ-----------FPGVTHVGGDMFK-EVPSG--DT 262 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTT-CCCCC--SE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh-----------cCCeEEEeCCcCC-CCCCC--CE
Confidence 4567899999999999999999885 5679999999 888766643 2579999999876 33333 99
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeec
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~ 122 (216)
|++...+++ +++++++.|+|||++++...
T Consensus 263 v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 263 ILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 999988864 46788999999999998654
No 238
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.27 E-value=1.9e-11 Score=100.14 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=75.9
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. |+.+++++|+ +.+++.+++ ..+++++.+|+.... +.+ |+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~-p~~--D~ 264 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA-----------FSGVEHLGGDMFDGV-PKG--DA 264 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCC-CCC--SE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh-----------cCCCEEEecCCCCCC-CCC--CE
Confidence 4567899999999999999999885 5679999999 888776643 257999999987633 333 99
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEeecC
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|++...+++ +++++++.|+|||++++....
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999988864 467889999999999986543
No 239
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.27 E-value=1.2e-11 Score=93.56 Aligned_cols=92 Identities=18% Similarity=0.116 Sum_probs=71.5
Q ss_pred HHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC
Q psy14962 6 IIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL 85 (216)
Q Consensus 6 ~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (216)
+++.+. ...++.+|||+|||+|..+..++ .+++++|+++. ++.+..+|+....
T Consensus 58 ~~~~l~-~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~~~~~d~~~~~ 110 (215)
T 2zfu_A 58 IARDLR-QRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPRVTVCDMAQVP 110 (215)
T ss_dssp HHHHHH-TSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STTEEESCTTSCS
T ss_pred HHHHHh-ccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------CceEEEeccccCC
Confidence 455554 34678899999999999987662 38999999887 2467888887655
Q ss_pred CCCCCccEEEecCCCCc-----hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 LHQAPFDAIYLSTYVPE-----IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~-----~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
...++||+|++...+++ ++..+.++|+|||.+++.....
T Consensus 111 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 111 LEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp CCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred CCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 55678999999888753 5688999999999999975443
No 240
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.25 E-value=1.5e-10 Score=87.02 Aligned_cols=94 Identities=19% Similarity=0.177 Sum_probs=73.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.+++++...+ .++.++.+|+... .++||+
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~d~~~~---~~~~D~ 115 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFK------GKFKVFIGDVSEF---NSRVDI 115 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGT------TSEEEEESCGGGC---CCCCSE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcC------CCEEEEECchHHc---CCCCCE
Confidence 346889999999999999999887 2 2389999999999999999887644 2789999998753 247999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEe
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~ 120 (216)
|+++.++.. +++.+.+.+ |+.+++.
T Consensus 116 v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 116 VIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 999988532 456677777 5544433
No 241
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.25 E-value=9.8e-11 Score=96.53 Aligned_cols=115 Identities=12% Similarity=0.015 Sum_probs=85.2
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCC-------------------------------------CcEEEE
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGK-------------------------------------TGRVFG 46 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~-------------------------------------~~~v~~ 46 (216)
+.++.+.. ..++..|||.+||+|.+++.++..... ..+|+|
T Consensus 191 a~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 191 AALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 34444433 467889999999999999998876431 136999
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEEecCCCCc----------hHHHHHhcCC--CC
Q psy14962 47 VEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIYLSTYVPE----------IPYSILLQLK--PG 114 (216)
Q Consensus 47 ~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~----------~~~~~~~~L~--~g 114 (216)
+|+++.+++.|++++...++ ..++++..+|+..... ..+||+|+++.++.. +...+.+.|+ +|
T Consensus 269 vDid~~al~~Ar~Na~~~gl----~~~I~~~~~D~~~~~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGL----GDLITFRQLQVADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTC----TTCSEEEECCGGGCCC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EECCHHHHHHHHHHHHHcCC----CCceEEEECChHhCCC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 99999999999999998774 2468999999876544 358999999999732 2233334444 48
Q ss_pred eEEEEeecCCC
Q psy14962 115 GRLVCGVGKSK 125 (216)
Q Consensus 115 G~lv~~~~~~~ 125 (216)
|.+++.+.+..
T Consensus 344 ~~~~iit~~~~ 354 (393)
T 3k0b_A 344 WSVYVLTSYEL 354 (393)
T ss_dssp CEEEEEECCTT
T ss_pred CEEEEEECCHH
Confidence 88888777664
No 242
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.25 E-value=2.4e-11 Score=101.97 Aligned_cols=115 Identities=17% Similarity=0.183 Sum_probs=87.4
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhC------------CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVG------------KTGRVFGVEHMREQCEDAWETVMRIRPDLLN 70 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~------------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~ 70 (216)
+..+++.+. ..++.+|+|.|||+|.+...+++.+. ....++|+|+++.++..|+.++..++..
T Consensus 160 ~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~--- 234 (445)
T 2okc_A 160 IQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG--- 234 (445)
T ss_dssp HHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC---
Confidence 345555554 35678999999999999998887641 1247999999999999999988776531
Q ss_pred CCCeEEEeccCCCCCCCCCCccEEEecCCCC-----------------------chHHHHHhcCCCCeEEEEeecC
Q psy14962 71 DGRLHLRCRDGRTGLLHQAPFDAIYLSTYVP-----------------------EIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 71 ~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~-----------------------~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
..++++.++|...... ..+||+|+++.|+. .++..+.+.|+|||++.+.+++
T Consensus 235 ~~~~~i~~gD~l~~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp SSCCSEEECCTTTSCC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cCCCCEeeCCCCCCcc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 1167889999765443 24799999998863 2367888999999999887754
No 243
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.25 E-value=1.6e-10 Score=94.92 Aligned_cols=115 Identities=13% Similarity=-0.008 Sum_probs=86.2
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCC-------------------------------------CcEEEE
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGK-------------------------------------TGRVFG 46 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~-------------------------------------~~~v~~ 46 (216)
+.++.+.. ..++..|+|.+||+|.+.++++..... ..+++|
T Consensus 184 aall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 184 AAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 33444433 567889999999999999998876421 136999
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEEecCCCCc----------hHHHHHhcCCC--C
Q psy14962 47 VEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIYLSTYVPE----------IPYSILLQLKP--G 114 (216)
Q Consensus 47 ~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~----------~~~~~~~~L~~--g 114 (216)
+|+++.+++.|++++...++ ..++++..+|+..... ..+||+|+++.++.. +...+.+.||+ |
T Consensus 262 vDid~~al~~Ar~Na~~~gl----~~~I~~~~~D~~~l~~-~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGL----EDVVKLKQMRLQDFKT-NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTC----TTTEEEEECCGGGCCC-CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred EECCHHHHHHHHHHHHHcCC----CCceEEEECChHHCCc-cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999998775 2469999999876544 348999999999742 22344455555 9
Q ss_pred eEEEEeecCCC
Q psy14962 115 GRLVCGVGKSK 125 (216)
Q Consensus 115 G~lv~~~~~~~ 125 (216)
+.+++.+.+..
T Consensus 337 ~~~~iit~~~~ 347 (384)
T 3ldg_A 337 WSQFILTNDTD 347 (384)
T ss_dssp SEEEEEESCTT
T ss_pred cEEEEEECCHH
Confidence 99988877664
No 244
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.24 E-value=8.4e-11 Score=96.73 Aligned_cols=107 Identities=14% Similarity=0.051 Sum_probs=82.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCC-------------------------------------CcEEEEEeCCHHHHHH
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGK-------------------------------------TGRVFGVEHMREQCED 56 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~-------------------------------------~~~v~~~D~~~~~~~~ 56 (216)
..++.+|||.+||+|.+++.++..... ...|+|+|+++.+++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 467889999999999999999876421 1479999999999999
Q ss_pred HHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEEecCCCCc----------hHHHHHhcCCC--CeEEEEeecCC
Q psy14962 57 AWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIYLSTYVPE----------IPYSILLQLKP--GGRLVCGVGKS 124 (216)
Q Consensus 57 a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~----------~~~~~~~~L~~--gG~lv~~~~~~ 124 (216)
|++++...++ ..++++.++|+..... ..+||+|+++.++.. +...+.+.|++ |+.+++.+.++
T Consensus 273 Ar~Na~~~gl----~~~i~~~~~D~~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 273 ARENAEIAGV----DEYIEFNVGDATQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHHHHTC----GGGEEEEECCGGGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHHHHcCC----CCceEEEECChhhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 9999988774 2479999999876543 358999999999742 22344445555 88888877766
Q ss_pred C
Q psy14962 125 K 125 (216)
Q Consensus 125 ~ 125 (216)
.
T Consensus 348 ~ 348 (385)
T 3ldu_A 348 D 348 (385)
T ss_dssp T
T ss_pred H
Confidence 4
No 245
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.24 E-value=2.7e-11 Score=94.18 Aligned_cols=88 Identities=13% Similarity=0.095 Sum_probs=69.8
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
++..+++.+. +.++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+++++.. ..+++++++|+
T Consensus 17 i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~-------~~~v~~i~~D~ 84 (255)
T 3tqs_A 17 VLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ-------QKNITIYQNDA 84 (255)
T ss_dssp HHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT-------CTTEEEEESCT
T ss_pred HHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh-------CCCcEEEEcch
Confidence 3456666664 578899999999999999999987 35999999999999999998754 26899999999
Q ss_pred CCCCCC----CCCccEEEecCCCCc
Q psy14962 82 RTGLLH----QAPFDAIYLSTYVPE 102 (216)
Q Consensus 82 ~~~~~~----~~~~D~i~~~~~~~~ 102 (216)
...... +++|| |+++.++.-
T Consensus 85 ~~~~~~~~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 85 LQFDFSSVKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp TTCCGGGSCCSSCEE-EEEECCHHH
T ss_pred HhCCHHHhccCCCeE-EEecCCccc
Confidence 765432 34688 778777644
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.24 E-value=1.5e-10 Score=88.26 Aligned_cols=94 Identities=14% Similarity=0.087 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.+..+|||+|||+|.++..+. +...++++|+|+.+++.+++++...+ .+..+.+.|....+.+ ++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g------~~~~~~v~D~~~~~~~-~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD------WDFTFALQDVLCAPPA-EAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT------CEEEEEECCTTTSCCC-CBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeecccCCCC-CCcchH
Confidence 567899999999999988766 35699999999999999999987754 5788999998766553 489999
Q ss_pred EecCCCCch-------HHHHHhcCCCCeEEEE
Q psy14962 95 YLSTYVPEI-------PYSILLQLKPGGRLVC 119 (216)
Q Consensus 95 ~~~~~~~~~-------~~~~~~~L~~gG~lv~ 119 (216)
++...++.+ ...+...|++++.+|-
T Consensus 173 Lllk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 173 LIFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp EEESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred HHHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 998777653 2477789999977665
No 247
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.23 E-value=2.1e-11 Score=97.26 Aligned_cols=99 Identities=16% Similarity=0.036 Sum_probs=70.8
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeC----CHHHHHHHHHHHHHhCCCCCCCCCeEEEec-cCCCCCCC
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEH----MREQCEDAWETVMRIRPDLLNDGRLHLRCR-DGRTGLLH 87 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~ 87 (216)
.+.++.+|||+|||+|.++..+++. ++|+++|+ ++.+++.+. .. ..+.+++.++.+ |+....
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~-----~~~~~~v~~~~~~D~~~l~-- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MS-----TYGWNLVRLQSGVDVFFIP-- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CC-----STTGGGEEEECSCCTTTSC--
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hh-----hcCCCCeEEEeccccccCC--
Confidence 3567899999999999999999887 27999998 554332110 00 011256888888 776432
Q ss_pred CCCccEEEecCCCC------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 88 QAPFDAIYLSTYVP------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 88 ~~~~D~i~~~~~~~------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.++||+|+++.+.. ..+..+.++|||||.|++.+..+
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 45799999987642 13456779999999999987766
No 248
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.23 E-value=1.4e-10 Score=86.65 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|+++.. +++++.+|+.... ++||+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~d~~~~~---~~~D~ 113 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG----------GVNFMVADVSEIS---GKYDT 113 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT----------TSEEEECCGGGCC---CCEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC----------CCEEEECcHHHCC---CCeeE
Confidence 346789999999999999999887 2 3479999999999999988742 5889999987532 67999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 121 (216)
|+++.++++ +++.+.+.+ |.+++.+
T Consensus 114 v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~ 146 (200)
T 1ne2_A 114 WIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIG 146 (200)
T ss_dssp EEECCCC-------CHHHHHHHHHHE---EEEEEEE
T ss_pred EEECCCchhccCchhHHHHHHHHHhc---CcEEEEE
Confidence 999988644 345666666 4454444
No 249
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.23 E-value=2.9e-11 Score=99.15 Aligned_cols=92 Identities=16% Similarity=0.123 Sum_probs=75.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.|++. .+++++.+|+... .+. ||+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~~-~~~--~D~ 270 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL-----------SGIEHVGGDMFAS-VPQ--GDA 270 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-----------TTEEEEECCTTTC-CCC--EEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc-----------CCCEEEeCCcccC-CCC--CCE
Confidence 4567899999999999999999885 4678999999 8888766531 4699999998763 222 999
Q ss_pred EEecCCCCc--------hHHHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~ 121 (216)
|++...+++ +++++++.|+|||++++..
T Consensus 271 v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 271 MILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999988864 5678899999999999864
No 250
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.22 E-value=2.9e-12 Score=100.33 Aligned_cols=103 Identities=17% Similarity=-0.038 Sum_probs=71.8
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEE--eccCCCCCCCCCC
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLR--CRDGRTGLLHQAP 90 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~ 90 (216)
.+.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... . .....++.++ .+|+.... +++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~--~-~~~~~~v~~~~~~~D~~~l~--~~~ 140 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRI--T-ESYGWNIVKFKSRVDIHTLP--VER 140 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCC--C-CBTTGGGEEEECSCCTTTSC--CCC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhh--h-hccCCCeEEEecccCHhHCC--CCC
Confidence 3568899999999999999998876 3899999998 53222111000 0 0001168888 88886533 568
Q ss_pred ccEEEecCCCC------------chHHHHHhcCCCCe--EEEEeecCCC
Q psy14962 91 FDAIYLSTYVP------------EIPYSILLQLKPGG--RLVCGVGKSK 125 (216)
Q Consensus 91 ~D~i~~~~~~~------------~~~~~~~~~L~~gG--~lv~~~~~~~ 125 (216)
||+|+++.... .++..+.++|+||| .+++.+..+.
T Consensus 141 fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~ 189 (265)
T 2oxt_A 141 TDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPY 189 (265)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred CcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCC
Confidence 99999986511 14567789999999 9999776643
No 251
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.22 E-value=5.6e-11 Score=91.47 Aligned_cols=99 Identities=12% Similarity=0.111 Sum_probs=81.6
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.+..+|||+|||+|-++..++... +...|+++|+++.+++.+++++...+ .+.++.+.|.....+ .++||
T Consensus 129 ~i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g------~~~~~~v~D~~~~~p-~~~~D 200 (281)
T 3lcv_B 129 HLPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLN------VPHRTNVADLLEDRL-DEPAD 200 (281)
T ss_dssp GSCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTT------CCEEEEECCTTTSCC-CSCCS
T ss_pred ccCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeeecccCC-CCCcc
Confidence 45567899999999999998887653 56799999999999999999998866 357899999875553 56799
Q ss_pred EEEecCCCCchH-------HHHHhcCCCCeEEEE
Q psy14962 93 AIYLSTYVPEIP-------YSILLQLKPGGRLVC 119 (216)
Q Consensus 93 ~i~~~~~~~~~~-------~~~~~~L~~gG~lv~ 119 (216)
++++...++.+. -.+...|+++|.+|-
T Consensus 201 vaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 201 VTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp EEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEE
T ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEe
Confidence 999999987643 268899999999875
No 252
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.22 E-value=3.4e-11 Score=94.35 Aligned_cols=86 Identities=17% Similarity=0.095 Sum_probs=69.9
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. +.++ +|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++.. .+++++++|+.
T Consensus 36 ~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~--------~~v~vi~~D~l 101 (271)
T 3fut_A 36 LRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG--------LPVRLVFQDAL 101 (271)
T ss_dssp HHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT--------SSEEEEESCGG
T ss_pred HHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC--------CCEEEEECChh
Confidence 456666664 5678 9999999999999999987 35899999999999999987643 57999999987
Q ss_pred CCCCCC-CCccEEEecCCCCc
Q psy14962 83 TGLLHQ-APFDAIYLSTYVPE 102 (216)
Q Consensus 83 ~~~~~~-~~~D~i~~~~~~~~ 102 (216)
...... ..+|.|+++.++..
T Consensus 102 ~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 102 LYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GSCGGGSCTTEEEEEEECSSC
T ss_pred hCChhhccCccEEEecCcccc
Confidence 554332 36899999998765
No 253
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.21 E-value=3e-12 Score=100.73 Aligned_cols=102 Identities=16% Similarity=-0.009 Sum_probs=71.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEE--eccCCCCCCCCCCc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLR--CRDGRTGLLHQAPF 91 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~ 91 (216)
+.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++..... .....++.++ .+|+.... +++|
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~---~~~~~~v~~~~~~~D~~~l~--~~~f 149 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLV---ETFGWNLITFKSKVDVTKME--PFQA 149 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCC---CCTTGGGEEEECSCCGGGCC--CCCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhh---hhcCCCeEEEeccCcHhhCC--CCCc
Confidence 567899999999999999998887 3899999998 533222110000 0001268888 88876533 5689
Q ss_pred cEEEecCCCC------------chHHHHHhcCCCCe--EEEEeecCCC
Q psy14962 92 DAIYLSTYVP------------EIPYSILLQLKPGG--RLVCGVGKSK 125 (216)
Q Consensus 92 D~i~~~~~~~------------~~~~~~~~~L~~gG--~lv~~~~~~~ 125 (216)
|+|+++.... .++..+.++|+||| .+++.+..+.
T Consensus 150 D~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~ 197 (276)
T 2wa2_A 150 DTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPY 197 (276)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCC
T ss_pred CEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCC
Confidence 9999986511 13567789999999 9998776653
No 254
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.21 E-value=2.6e-11 Score=99.41 Aligned_cols=100 Identities=20% Similarity=0.115 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh---------------CCCCCCCCCeEEEecc
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI---------------RPDLLNDGRLHLRCRD 80 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~---------------~~~~~~~~~~~~~~~d 80 (216)
++.+|||+|||+|..++.+++..+ ..+|+++|+++.+++.+++++..+ ++ .++.++++|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl-----~~i~v~~~D 120 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE-----KTIVINHDD 120 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS-----SEEEEEESC
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC-----CceEEEcCc
Confidence 688999999999999999999853 358999999999999999999887 53 358899999
Q ss_pred CCCCCC-CCCCccEEEecCCCC--chHHHHHhcCCCCeEEEEee
Q psy14962 81 GRTGLL-HQAPFDAIYLSTYVP--EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 81 ~~~~~~-~~~~~D~i~~~~~~~--~~~~~~~~~L~~gG~lv~~~ 121 (216)
+..... ..+.||+|+++.+.. .+++.+.+.|++||.+++++
T Consensus 121 a~~~~~~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 121 ANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 753321 135799999887543 46788889999999988875
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.18 E-value=5e-11 Score=99.09 Aligned_cols=105 Identities=24% Similarity=0.165 Sum_probs=80.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. ..++.+|||+|||+|.++..++++.++..+++|+|+++.+++.| .++.++++|..
T Consensus 28 ~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~~~~~D~~ 91 (421)
T 2ih2_A 28 VDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAEGILADFL 91 (421)
T ss_dssp HHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEEEEESCGG
T ss_pred HHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCcEEeCChh
Confidence 344555554 24567999999999999999998864456999999999988665 25889999987
Q ss_pred CCCCCCCCccEEEecCCCC-----------------------------------chHHHHHhcCCCCeEEEEeecCC
Q psy14962 83 TGLLHQAPFDAIYLSTYVP-----------------------------------EIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 83 ~~~~~~~~~D~i~~~~~~~-----------------------------------~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
... ..++||+|+++.++. .++..+.++|+|||++++.++..
T Consensus 92 ~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 92 LWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp GCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred hcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 543 246899999986651 12467789999999999987664
No 256
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.17 E-value=5.9e-11 Score=96.57 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=75.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.++.+|||+|||+|..+..+++.. |+.+++++|+ +.+++.|++. .+++++.+|+.... + .||+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~~~-p--~~D~ 249 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS-----------NNLTYVGGDMFTSI-P--NADA 249 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB-----------TTEEEEECCTTTCC-C--CCSE
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC-----------CCcEEEeccccCCC-C--CccE
Confidence 4567899999999999999999885 4669999999 9988776541 45999999986532 2 3999
Q ss_pred EEecCCCCc--------hHHHHHhcCCC---CeEEEEeec
Q psy14962 94 IYLSTYVPE--------IPYSILLQLKP---GGRLVCGVG 122 (216)
Q Consensus 94 i~~~~~~~~--------~~~~~~~~L~~---gG~lv~~~~ 122 (216)
|++...+++ +++++++.|+| ||++++...
T Consensus 250 v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred EEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 999988764 45788999999 999988654
No 257
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.17 E-value=2.7e-10 Score=85.06 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=77.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC---------
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG--------- 84 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~--------- 84 (216)
+.+..+|||+|| |+.+..+++. ++++|+++|.+++..+.|++++.+.++. ..++++++.+|+...
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~--~~~~I~~~~gda~~~~~wg~p~~~ 101 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPA--EGTEVNIVWTDIGPTGDWGHPVSD 101 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCC--TTCEEEEEECCCSSBCGGGCBSSS
T ss_pred hhCCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCCceEEEEeCchhhhcccccccc
Confidence 456789999998 5888888874 2569999999999999999999886530 026899999996532
Q ss_pred -----C----------CCCCCccEEEecCCCC-chHHHHHhcCCCCeEEEEe
Q psy14962 85 -----L----------LHQAPFDAIYLSTYVP-EIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 85 -----~----------~~~~~~D~i~~~~~~~-~~~~~~~~~L~~gG~lv~~ 120 (216)
. ...++||+|+++.... .....+.+.|+|||++++.
T Consensus 102 ~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 102 AKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp TTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEET
T ss_pred hhhhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEEe
Confidence 0 1236899999998754 3345567999999999874
No 258
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.17 E-value=4.2e-11 Score=98.40 Aligned_cols=103 Identities=18% Similarity=0.092 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCC-eEEEeccCCCCCC--CCCCc
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGR-LHLRCRDGRTGLL--HQAPF 91 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~--~~~~~ 91 (216)
.+|.+|||++||+|..++.++...+...+|+++|+++.+++.+++++..++++ ++ +.++.+|+..... ..+.|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~----~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP----EDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC----GGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC----CceEEEEeCCHHHHHHHhhCCCC
Confidence 46889999999999999999987431258999999999999999999987741 33 8999999753221 13579
Q ss_pred cEEEecCCC--CchHHHHHhcCCCCeEEEEee
Q psy14962 92 DAIYLSTYV--PEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 92 D~i~~~~~~--~~~~~~~~~~L~~gG~lv~~~ 121 (216)
|+|+++..- ..++..+.+.|++||.+++++
T Consensus 127 D~V~lDP~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDPFGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECCCcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999998732 247788889999999988877
No 259
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.17 E-value=3.3e-10 Score=87.62 Aligned_cols=76 Identities=14% Similarity=0.257 Sum_probs=60.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCC-CCcc
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQ-APFD 92 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D 92 (216)
+.++.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++.. ..++.++.+|+....... ..|
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~~~~~~~~~~- 96 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD-------HDNFQVLNKDILQFKFPKNQSY- 96 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT-------CCSEEEECCCGGGCCCCSSCCC-
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc-------CCCeEEEEChHHhCCcccCCCe-
Confidence 4578899999999999999999883 5999999999999999987643 257999999987654332 345
Q ss_pred EEEecCCC
Q psy14962 93 AIYLSTYV 100 (216)
Q Consensus 93 ~i~~~~~~ 100 (216)
.|+++.++
T Consensus 97 ~vv~nlPy 104 (244)
T 1qam_A 97 KIFGNIPY 104 (244)
T ss_dssp EEEEECCG
T ss_pred EEEEeCCc
Confidence 56666654
No 260
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.15 E-value=1.7e-12 Score=100.52 Aligned_cols=111 Identities=18% Similarity=0.108 Sum_probs=83.5
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. +.++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.++++... ..+++++.+|+.
T Consensus 18 ~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~-------~~~v~~~~~D~~ 85 (245)
T 1yub_A 18 LNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKL-------NTRVTLIHQDIL 85 (245)
T ss_dssp HHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTT-------CSEEEECCSCCT
T ss_pred HHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhcc-------CCceEEEECChh
Confidence 455666664 5678899999999999999999883 5999999999999888776532 257899999987
Q ss_pred CCCCC-CCCccEEEecCCCCc-----------------hH----HHHHhcCCCCeEEEEeecCCCC
Q psy14962 83 TGLLH-QAPFDAIYLSTYVPE-----------------IP----YSILLQLKPGGRLVCGVGKSKS 126 (216)
Q Consensus 83 ~~~~~-~~~~D~i~~~~~~~~-----------------~~----~~~~~~L~~gG~lv~~~~~~~~ 126 (216)
..... .++| .|+++.+... .+ +.+.++|+|||.+++.+.....
T Consensus 86 ~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~~~~ 150 (245)
T 1yub_A 86 QFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHTQVS 150 (245)
T ss_dssp TTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTTTBC
T ss_pred hcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhheehee
Confidence 65443 3578 7777765421 12 5688999999998887665543
No 261
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.14 E-value=7.6e-10 Score=87.14 Aligned_cols=110 Identities=22% Similarity=0.171 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCccE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~ 93 (216)
....+||-||.|.|..+.++++.. +..+|+.+|+++..++.+++.+.......+...+++++.+|+..... ..++||+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 456799999999999999999874 24599999999999999999875422111235789999999875543 3478999
Q ss_pred EEecCCCC----------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 94 IYLSTYVP----------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 94 i~~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
|+++..-+ .+.+.+++.|+|||+++....++.
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~ 202 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESS
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcc
Confidence 99876532 356899999999999999876654
No 262
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.14 E-value=4.1e-11 Score=96.80 Aligned_cols=108 Identities=21% Similarity=0.185 Sum_probs=80.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhC---CCCCCCCCeEEEeccCCCCCC----CC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIR---PDLLNDGRLHLRCRDGRTGLL----HQ 88 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~d~~~~~~----~~ 88 (216)
++.+||++|||+|..+..++++. + .+|+++|+++.+++.|++++...+ ++.....+++++.+|+..... ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 56899999999999999998873 3 699999999999999999864321 100001279999999875432 25
Q ss_pred CCccEEEecCCC-C-----------chHHHH----HhcCCCCeEEEEeecCCC
Q psy14962 89 APFDAIYLSTYV-P-----------EIPYSI----LLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 89 ~~~D~i~~~~~~-~-----------~~~~~~----~~~L~~gG~lv~~~~~~~ 125 (216)
++||+|+++.+. + .+.+.+ .++|+|||.+++...++.
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~ 318 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN 318 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcc
Confidence 689999998753 1 123454 899999999999876654
No 263
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.13 E-value=1.1e-10 Score=92.29 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=68.8
Q ss_pred cCCCCCeEEEEcCCC------chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEE-EeccCCCCC
Q psy14962 13 KIQEGAKVLDIGSGS------GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHL-RCRDGRTGL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~------G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~d~~~~~ 85 (216)
.++++.+|||+|||+ |. ..+++..+++++|+|+|+++. + .++.+ +.+|+....
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-----------------~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-----------------SDADSTLIGDCATVH 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-----------------CSSSEEEESCGGGCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-----------------CCCEEEEECccccCC
Confidence 467899999999954 66 445666554679999999997 1 25778 999987543
Q ss_pred CCCCCccEEEecCCCC-----------------chHHHHHhcCCCCeEEEEeecCCC
Q psy14962 86 LHQAPFDAIYLSTYVP-----------------EIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
. .++||+|+++...+ .+++.+.++|||||.|++.+....
T Consensus 120 ~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~ 175 (290)
T 2xyq_A 120 T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 175 (290)
T ss_dssp C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 3 36799999975421 356788999999999999775543
No 264
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.12 E-value=1.2e-10 Score=92.58 Aligned_cols=91 Identities=23% Similarity=0.207 Sum_probs=73.6
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
|+..+++.+. +.++.+|||+|||+|..+..+++..+ +.+|+++|.|+.+++.|++++...+ .++.++++|+
T Consensus 14 Ll~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g------~~v~~v~~d~ 84 (301)
T 1m6y_A 14 MVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS------DRVSLFKVSY 84 (301)
T ss_dssp THHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT------TTEEEEECCG
T ss_pred HHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCH
Confidence 5667777775 56889999999999999999999863 5699999999999999999887643 5899999997
Q ss_pred CCCC--CC---CCCccEEEecCCCC
Q psy14962 82 RTGL--LH---QAPFDAIYLSTYVP 101 (216)
Q Consensus 82 ~~~~--~~---~~~~D~i~~~~~~~ 101 (216)
.... .. ..+||.|+++.+..
T Consensus 85 ~~l~~~l~~~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 85 READFLLKTLGIEKVDGILMDLGVS 109 (301)
T ss_dssp GGHHHHHHHTTCSCEEEEEEECSCC
T ss_pred HHHHHHHHhcCCCCCCEEEEcCccc
Confidence 6432 11 15799999988764
No 265
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.10 E-value=4.5e-10 Score=88.42 Aligned_cols=99 Identities=15% Similarity=0.117 Sum_probs=71.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGK-TGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
+..+++.+. +.++.+|||+|||+|.++..+++.... +++|+++|+++.+++.++++. . .+++++++|+
T Consensus 31 ~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~--------~~v~~i~~D~ 99 (279)
T 3uzu_A 31 IDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G--------ELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G--------GGEEEEESCG
T ss_pred HHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C--------CCcEEEECCh
Confidence 455666664 568899999999999999999998542 234999999999999999884 2 5799999998
Q ss_pred CCCCCCC----C--CccEEEecCCCCchHHHHHhcCC
Q psy14962 82 RTGLLHQ----A--PFDAIYLSTYVPEIPYSILLQLK 112 (216)
Q Consensus 82 ~~~~~~~----~--~~D~i~~~~~~~~~~~~~~~~L~ 112 (216)
......+ . ..+.|+++.++.-...-+.++|.
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~NlPY~iss~il~~ll~ 136 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMS 136 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEECCHHHHHHHHHHHGG
T ss_pred hcCChhHhcccccCCceEEEEccCccccHHHHHHHHh
Confidence 7543321 1 23567777776544344445554
No 266
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.09 E-value=3e-10 Score=97.31 Aligned_cols=114 Identities=18% Similarity=0.082 Sum_probs=86.4
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCC-----------------CcEEEEEeCCHHHHHHHHHHHHHhCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGK-----------------TGRVFGVEHMREQCEDAWETVMRIRP 66 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~-----------------~~~v~~~D~~~~~~~~a~~~~~~~~~ 66 (216)
..+++.+. ..++.+|+|.|||+|.+...+++.+.. ...++|+|+++.++..|+.++..++.
T Consensus 159 ~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi 236 (541)
T 2ar0_A 159 KTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDI 236 (541)
T ss_dssp HHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCC
Confidence 44555554 356789999999999999888876421 13799999999999999998876553
Q ss_pred CCCCCCC-----eEEEeccCCCCC-CCCCCccEEEecCCCC--------------------chHHHHHhcCCCCeEEEEe
Q psy14962 67 DLLNDGR-----LHLRCRDGRTGL-LHQAPFDAIYLSTYVP--------------------EIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 67 ~~~~~~~-----~~~~~~d~~~~~-~~~~~~D~i~~~~~~~--------------------~~~~~~~~~L~~gG~lv~~ 120 (216)
.. +.+.++|..... ....+||+|++++|+. .++..+.+.|+|||++.+.
T Consensus 237 -----~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V 311 (541)
T 2ar0_A 237 -----EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVV 311 (541)
T ss_dssp -----CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEE
Confidence 33 778899875432 2346799999998863 2557888999999999888
Q ss_pred ecCC
Q psy14962 121 VGKS 124 (216)
Q Consensus 121 ~~~~ 124 (216)
+++.
T Consensus 312 ~p~~ 315 (541)
T 2ar0_A 312 VPDN 315 (541)
T ss_dssp EEHH
T ss_pred ecCc
Confidence 7654
No 267
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.08 E-value=2.4e-10 Score=93.14 Aligned_cols=92 Identities=13% Similarity=0.125 Sum_probs=74.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.++.+|||+|||+|..+..+++.. ++.+++++|+ +.+++.+++ ..++.++.+|+.. ..+ .||+|
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~-~~~--~~D~v 255 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG-----------NENLNFVGGDMFK-SIP--SADAV 255 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC-----------CSSEEEEECCTTT-CCC--CCSEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc-----------CCCcEEEeCccCC-CCC--CceEE
Confidence 467899999999999999999885 5678999999 788766543 1459999999876 322 49999
Q ss_pred EecCCCCc--------hHHHHHhcCCC---CeEEEEeec
Q psy14962 95 YLSTYVPE--------IPYSILLQLKP---GGRLVCGVG 122 (216)
Q Consensus 95 ~~~~~~~~--------~~~~~~~~L~~---gG~lv~~~~ 122 (216)
++...+++ +++++++.|+| ||++++...
T Consensus 256 ~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 256 LLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred EEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 99988764 45788899999 999988643
No 268
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.06 E-value=5.6e-11 Score=87.11 Aligned_cols=82 Identities=21% Similarity=0.163 Sum_probs=66.9
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC---CCC
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL---HQA 89 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~ 89 (216)
.+.+|.+|||+|||. +++|+++.|++.|+++.. .++.+..+|+..... .++
T Consensus 9 g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~---------~~~~~~~~d~~~~~~~~~~~~ 62 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG---------NEGRVSVENIKQLLQSAHKES 62 (176)
T ss_dssp TCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT---------TTSEEEEEEGGGGGGGCCCSS
T ss_pred CCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc---------cCcEEEEechhcCccccCCCC
Confidence 367899999999986 128999999999988743 248899999875544 567
Q ss_pred CccEEEecCCCCc-------hHHHHHhcCCCCeEEEEe
Q psy14962 90 PFDAIYLSTYVPE-------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 90 ~~D~i~~~~~~~~-------~~~~~~~~L~~gG~lv~~ 120 (216)
+||+|++...+++ ++++++++|||||++++.
T Consensus 63 ~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 63 SFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp CEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 8999999877665 468999999999999994
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.05 E-value=1.6e-09 Score=95.54 Aligned_cols=117 Identities=16% Similarity=0.097 Sum_probs=86.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhC-----------------------------------------CC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVG-----------------------------------------KT 41 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~-----------------------------------------~~ 41 (216)
++.++.+.. ..++..|+|.+||+|.+.+.++.... +.
T Consensus 179 Aa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 179 AAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 344444443 46788999999999999998887531 12
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC--CCCccEEEecCCCCc----------h---HHH
Q psy14962 42 GRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH--QAPFDAIYLSTYVPE----------I---PYS 106 (216)
Q Consensus 42 ~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~i~~~~~~~~----------~---~~~ 106 (216)
..++|+|+++.+++.|+.++...|+ ...+.+..+|+.....+ .++||+|++++|+.. + +..
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv----~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGI----GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 4799999999999999999998775 24589999998754322 237999999999743 1 133
Q ss_pred HHhcCCCCeEEEEeecCCC
Q psy14962 107 ILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 107 ~~~~L~~gG~lv~~~~~~~ 125 (216)
+.+.+.|||.+++.+.++.
T Consensus 333 ~lk~~~~g~~~~ilt~~~~ 351 (703)
T 3v97_A 333 IMKNQFGGWNLSLFSASPD 351 (703)
T ss_dssp HHHHHCTTCEEEEEESCHH
T ss_pred HHHhhCCCCeEEEEeCCHH
Confidence 4455678999999887663
No 270
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.03 E-value=1.1e-09 Score=90.22 Aligned_cols=79 Identities=20% Similarity=0.198 Sum_probs=65.7
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh--CCCCCCCCCeEEEeccCCCCCCC--CC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI--RPDLLNDGRLHLRCRDGRTGLLH--QA 89 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~--~~ 89 (216)
+.+|.+|||+|||+|..+..+++. +.+|+++|.|+.+++.|++++... + ..++.++++|+...... .+
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~g-----l~~i~~i~~Da~~~L~~~~~~ 162 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNE-----GKDVNILTGDFKEYLPLIKTF 162 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCT-----TCEEEEEESCGGGSHHHHHHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccC-----CCcEEEEECcHHHhhhhccCC
Confidence 345899999999999999998877 459999999999999999999876 5 26899999998754221 25
Q ss_pred CccEEEecCCC
Q psy14962 90 PFDAIYLSTYV 100 (216)
Q Consensus 90 ~~D~i~~~~~~ 100 (216)
+||+|+++.+.
T Consensus 163 ~fDvV~lDPPr 173 (410)
T 3ll7_A 163 HPDYIYVDPAR 173 (410)
T ss_dssp CCSEEEECCEE
T ss_pred CceEEEECCCC
Confidence 79999998775
No 271
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.00 E-value=1.3e-09 Score=88.58 Aligned_cols=112 Identities=17% Similarity=0.224 Sum_probs=86.3
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCC-CCCCeEEEeccCCCCC-CCCCC
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLL-NDGRLHLRCRDGRTGL-LHQAP 90 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~d~~~~~-~~~~~ 90 (216)
..++|.+|||+|||+|.-+..++... ..+.++++|+++..+...++++.+.+.... ...++.+...|..... ...+.
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTC
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcccc
Confidence 46899999999999999999998864 346899999999999999999988664311 2357888888875432 23467
Q ss_pred ccEEEecCCCCc------------------------------hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 91 FDAIYLSTYVPE------------------------------IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 91 ~D~i~~~~~~~~------------------------------~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
||.|+++.+-.. ++....+.|||||++|.++++..
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 999998776311 23566689999999999988764
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.00 E-value=9.9e-10 Score=85.11 Aligned_cols=95 Identities=21% Similarity=0.246 Sum_probs=69.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
+..+++.+. +.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++ . ..+++++++|+.
T Consensus 20 ~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~--~-------~~~v~~i~~D~~ 86 (249)
T 3ftd_A 20 LKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI--G-------DERLEVINEDAS 86 (249)
T ss_dssp HHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS--C-------CTTEEEECSCTT
T ss_pred HHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc--c-------CCCeEEEEcchh
Confidence 445666654 467899999999999999999987 2 35999999999999999876 2 267999999987
Q ss_pred CCCCCC--CCccEEEecCCCCchHHHHHhcC
Q psy14962 83 TGLLHQ--APFDAIYLSTYVPEIPYSILLQL 111 (216)
Q Consensus 83 ~~~~~~--~~~D~i~~~~~~~~~~~~~~~~L 111 (216)
.....+ +.+ .|+++.+..-....+.++|
T Consensus 87 ~~~~~~~~~~~-~vv~NlPy~i~~~il~~ll 116 (249)
T 3ftd_A 87 KFPFCSLGKEL-KVVGNLPYNVASLIIENTV 116 (249)
T ss_dssp TCCGGGSCSSE-EEEEECCTTTHHHHHHHHH
T ss_pred hCChhHccCCc-EEEEECchhccHHHHHHHH
Confidence 654322 233 7777877755333333333
No 273
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.96 E-value=1.1e-08 Score=87.52 Aligned_cols=119 Identities=14% Similarity=0.066 Sum_probs=88.5
Q ss_pred HHHHHHHhccc--CCCCCeEEEEcCCCchHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe
Q psy14962 3 QARIIELLEPK--IQEGAKVLDIGSGSGFMSCVFAELVG--KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC 78 (216)
Q Consensus 3 ~~~~~~~l~~~--~~~~~~vldiG~G~G~~~~~l~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 78 (216)
+..|++.+... ..++.+|+|.+||+|.+...+++.+. ....++|+|+++.++..|+.++.-++. ...++.+.+
T Consensus 206 v~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi---~~~~~~I~~ 282 (542)
T 3lkd_A 206 AKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV---PIENQFLHN 282 (542)
T ss_dssp HHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC---CGGGEEEEE
T ss_pred HHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC---CcCccceEe
Confidence 34455555422 23678999999999999988888752 235899999999999999998877653 114678999
Q ss_pred ccCCCC--C-CCCCCccEEEecCCCCc-----------------------------hHHHHHhcCC-CCeEEEEeecCC
Q psy14962 79 RDGRTG--L-LHQAPFDAIYLSTYVPE-----------------------------IPYSILLQLK-PGGRLVCGVGKS 124 (216)
Q Consensus 79 ~d~~~~--~-~~~~~~D~i~~~~~~~~-----------------------------~~~~~~~~L~-~gG~lv~~~~~~ 124 (216)
+|.... + ....+||+|++++|+.. ++..+.+.|+ +||++.+.+++.
T Consensus 283 gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 283 ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred cceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 997644 2 23568999999988510 3467789999 999998887765
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.96 E-value=2.6e-10 Score=88.84 Aligned_cols=82 Identities=22% Similarity=0.215 Sum_probs=63.3
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCH-------HHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMR-------EQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL 86 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~-------~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (216)
..++.+|||+|||+|..+..+++. +.+|+++|+++ .+++.|+++...++. ..++.++++|......
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~----~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDT----AARINLHFGNAAEQMP 153 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH----HTTEEEEESCHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC----ccCeEEEECCHHHHHH
Confidence 456789999999999999999986 35999999999 999999887665442 1359999999764321
Q ss_pred --CC--CCccEEEecCCCCc
Q psy14962 87 --HQ--APFDAIYLSTYVPE 102 (216)
Q Consensus 87 --~~--~~~D~i~~~~~~~~ 102 (216)
.+ ++||+|+++.+++.
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHCCCSEEEECCCC--
T ss_pred hhhccCCCccEEEECCCCCC
Confidence 22 57999999887643
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.94 E-value=2.7e-09 Score=91.31 Aligned_cols=115 Identities=20% Similarity=0.171 Sum_probs=83.4
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCC--------------CcEEEEEeCCHHHHHHHHHHHHHhCCCC
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGK--------------TGRVFGVEHMREQCEDAWETVMRIRPDL 68 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~--------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~ 68 (216)
+..|++.+.+ .++ +|+|.+||+|.+...+++.+.. ...++|+|+++.++..|+.++..++..
T Consensus 234 v~lmv~ll~p--~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~- 309 (544)
T 3khk_A 234 VTLIVEMLEP--YKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID- 309 (544)
T ss_dssp HHHHHHHHCC--CSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHhc--CCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC-
Confidence 4455565542 334 9999999999998887654310 248999999999999999988776641
Q ss_pred CCCCCeEEEeccCCCCC-CCCCCccEEEecCCCCc-----------------------------------hHHHHHhcCC
Q psy14962 69 LNDGRLHLRCRDGRTGL-LHQAPFDAIYLSTYVPE-----------------------------------IPYSILLQLK 112 (216)
Q Consensus 69 ~~~~~~~~~~~d~~~~~-~~~~~~D~i~~~~~~~~-----------------------------------~~~~~~~~L~ 112 (216)
.++.+.++|..... ....+||+|++++|+.. ++..+.+.|+
T Consensus 310 ---~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 386 (544)
T 3khk_A 310 ---FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLA 386 (544)
T ss_dssp ---CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEE
T ss_pred ---cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhc
Confidence 23444777765332 23468999999988642 3467889999
Q ss_pred CCeEEEEeecCC
Q psy14962 113 PGGRLVCGVGKS 124 (216)
Q Consensus 113 ~gG~lv~~~~~~ 124 (216)
|||++.+.+++.
T Consensus 387 ~gGr~aiVlP~g 398 (544)
T 3khk_A 387 PTGSMALLLANG 398 (544)
T ss_dssp EEEEEEEEEETH
T ss_pred cCceEEEEecch
Confidence 999998887664
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.92 E-value=1.1e-09 Score=85.02 Aligned_cols=89 Identities=12% Similarity=0.071 Sum_probs=64.7
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
++..+++.+. +.++.+|||+|||+|.++. ++ . +...+|+++|+++.+++.+++++.. ..++.++++|+
T Consensus 9 i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~-------~~~v~~i~~D~ 76 (252)
T 1qyr_A 9 VIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFL-------GPKLTIYQQDA 76 (252)
T ss_dssp HHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTT-------GGGEEEECSCG
T ss_pred HHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECch
Confidence 3566777764 5788999999999999999 64 3 2212399999999999999876543 14799999998
Q ss_pred CCCCCCC-----CCccEEEecCCCCc
Q psy14962 82 RTGLLHQ-----APFDAIYLSTYVPE 102 (216)
Q Consensus 82 ~~~~~~~-----~~~D~i~~~~~~~~ 102 (216)
......+ +..+.|+++.+..-
T Consensus 77 ~~~~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 77 MTFNFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp GGCCHHHHHHHHTSCEEEEEECCTTT
T ss_pred hhCCHHHhhcccCCceEEEECCCCCc
Confidence 7543211 23468888887643
No 277
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.83 E-value=1.5e-08 Score=89.07 Aligned_cols=110 Identities=9% Similarity=-0.024 Sum_probs=75.2
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhC--CCcEEEEEeCCHHHHHHHH--HHHHHhCCCCCCCCCeEEEeccCCCC-CCCC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVG--KTGRVFGVEHMREQCEDAW--ETVMRIRPDLLNDGRLHLRCRDGRTG-LLHQ 88 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~--~~~~v~~~D~~~~~~~~a~--~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~ 88 (216)
..++.+|+|.|||+|.+...+++..+ ....++|+|+++.++..|+ .++..+.+. .+.....+...|.... ....
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Ll-hGi~~~~I~~dD~L~~~~~~~ 397 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLV-SSNNAPTITGEDVCSLNPEDF 397 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTC-BTTBCCEEECCCGGGCCGGGG
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhh-cCCCcceEEecchhccccccc
Confidence 45688999999999999999988753 1247999999999999984 333221110 0112234555554432 1234
Q ss_pred CCccEEEecCCCCc-----------------------------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 89 APFDAIYLSTYVPE-----------------------------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 89 ~~~D~i~~~~~~~~-----------------------------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.+||+|++++|+.. ++..+.+.|++||++.+.+++.
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 67999999999721 2355678999999999988765
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.76 E-value=2.6e-08 Score=86.16 Aligned_cols=96 Identities=15% Similarity=0.050 Sum_probs=68.3
Q ss_pred CCeEEEEcCCCchHHHHH---HHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 17 GAKVLDIGSGSGFMSCVF---AELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l---~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+..|+|+|||+|.+.... ++..+...+|+++|.++ +...+++....+++ .++|+++.+|++.... .+++|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~----~dkVtVI~gd~eev~L-PEKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW----GSQVTVVSSDMREWVA-PEKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT----GGGEEEEESCTTTCCC-SSCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC----CCeEEEEeCcceeccC-CcccCE
Confidence 346999999999985444 44432223789999997 56677787777765 4789999999986544 357999
Q ss_pred EEecCCC-----Cc---hHHHHHhcCCCCeEEE
Q psy14962 94 IYLSTYV-----PE---IPYSILLQLKPGGRLV 118 (216)
Q Consensus 94 i~~~~~~-----~~---~~~~~~~~L~~gG~lv 118 (216)
|++-..- +. .+....+.|||||.++
T Consensus 432 IVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 9974331 22 3345568999999863
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.75 E-value=2.7e-08 Score=77.28 Aligned_cols=86 Identities=22% Similarity=0.200 Sum_probs=62.1
Q ss_pred CCCC--CeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CCCC---CCCeEEEeccCCCCCC-
Q psy14962 14 IQEG--AKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRP-DLLN---DGRLHLRCRDGRTGLL- 86 (216)
Q Consensus 14 ~~~~--~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~d~~~~~~- 86 (216)
+.++ .+|||+|||+|..+..++.. +++|+++|.++.+...+++++..... .... ..+++++++|......
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 4567 89999999999999999988 34899999999987777666543210 0000 1468999999764221
Q ss_pred CCCCccEEEecCCCCc
Q psy14962 87 HQAPFDAIYLSTYVPE 102 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~ 102 (216)
..++||+|+++.+++.
T Consensus 161 ~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 161 ITPRPQVVYLDPMFPH 176 (258)
T ss_dssp CSSCCSEEEECCCCCC
T ss_pred CcccCCEEEEcCCCCC
Confidence 1236999999988764
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.67 E-value=5.1e-08 Score=68.22 Aligned_cols=102 Identities=14% Similarity=0.093 Sum_probs=73.9
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCc-hHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSG-FMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD 80 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G-~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d 80 (216)
|...+.+.+.....++.+|||+|||+| ..+..+++.. +..|+++|+++..+. ++..|
T Consensus 21 m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~--------------------~v~dD 78 (153)
T 2k4m_A 21 MWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG--------------------IVRDD 78 (153)
T ss_dssp HHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT--------------------EECCC
T ss_pred HHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc--------------------eEEcc
Confidence 455666676666667789999999999 5889888753 568999999886432 67778
Q ss_pred CCCCCCCC-CCccEEEecCCCCchHHHHHhcCCC-CeEEEEeecCCC
Q psy14962 81 GRTGLLHQ-APFDAIYLSTYVPEIPYSILLQLKP-GGRLVCGVGKSK 125 (216)
Q Consensus 81 ~~~~~~~~-~~~D~i~~~~~~~~~~~~~~~~L~~-gG~lv~~~~~~~ 125 (216)
+....... ..||+|++..+-+.+...+.++-+. |.-+++.....+
T Consensus 79 iF~P~~~~Y~~~DLIYsirPP~El~~~i~~lA~~v~adliI~pL~~E 125 (153)
T 2k4m_A 79 ITSPRMEIYRGAALIYSIRPPAEIHSSLMRVADAVGARLIIKPLTGE 125 (153)
T ss_dssp SSSCCHHHHTTEEEEEEESCCTTTHHHHHHHHHHHTCEEEEECBTTB
T ss_pred CCCCcccccCCcCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 76543321 4799999988888776666655554 777877665554
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.64 E-value=5.8e-08 Score=78.80 Aligned_cols=108 Identities=19% Similarity=0.123 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhC---CCCCCCCCeEEEeccCCCCC----CC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIR---PDLLNDGRLHLRCRDGRTGL----LH 87 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~d~~~~~----~~ 87 (216)
.+..+||-+|.|.|....++++. . ..+|+.+|+++..++.+++.+.... .+....++++++.+|+.... ..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35689999999999999999987 2 3699999999999999998753211 11111246889999976332 12
Q ss_pred CCCccEEEecCCC----------------CchHHHHHhcCCCCeEEEEeecCC
Q psy14962 88 QAPFDAIYLSTYV----------------PEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 88 ~~~~D~i~~~~~~----------------~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.++||+|+.+..- ..+.+.+++.|+|||+++.....+
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~ 334 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 334 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 4679999987432 113477889999999999875544
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.62 E-value=9e-08 Score=74.10 Aligned_cols=105 Identities=15% Similarity=0.070 Sum_probs=68.4
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.++++.+|||+|||+|.++..+++..+ ...+.++|+...+....... . .. ..++.....++.......++||
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~-----~~-g~~ii~~~~~~dv~~l~~~~~D 142 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-Q-----SL-GWNIITFKDKTDIHRLEPVKCD 142 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-C-----BT-TGGGEEEECSCCTTTSCCCCCS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCccccccc-C-----cC-CCCeEEEeccceehhcCCCCcc
Confidence 367888999999999999998887632 24778888764321000000 0 00 0144455555443334467899
Q ss_pred EEEecCCCC----c--------hHHHHHhcCCCC-eEEEEeecCCC
Q psy14962 93 AIYLSTYVP----E--------IPYSILLQLKPG-GRLVCGVGKSK 125 (216)
Q Consensus 93 ~i~~~~~~~----~--------~~~~~~~~L~~g-G~lv~~~~~~~ 125 (216)
+|+++.... + +++.+.++|+|| |.|++-+..|+
T Consensus 143 lVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py 188 (277)
T 3evf_A 143 TLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY 188 (277)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT
T ss_pred EEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC
Confidence 999987554 1 235557899999 99999998853
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.58 E-value=5.1e-08 Score=84.57 Aligned_cols=97 Identities=15% Similarity=0.010 Sum_probs=66.4
Q ss_pred CCeEEEEcCCCchHHHHHHHH---hC---------CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 17 GAKVLDIGSGSGFMSCVFAEL---VG---------KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~---~~---------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
+..|+|+|||+|.+....++. .+ ...+|+++|.++......+.... ++. .++|+++.+|++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~----~d~VtVI~gd~eev 484 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW----KRRVTIIESDMRSL 484 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT----TTCSEEEESCGGGH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC----CCeEEEEeCchhhc
Confidence 457999999999997543222 11 12499999999977655555443 443 36799999999754
Q ss_pred CCC-----CCCccEEEecCCC--------CchHHHHHhcCCCCeEEE
Q psy14962 85 LLH-----QAPFDAIYLSTYV--------PEIPYSILLQLKPGGRLV 118 (216)
Q Consensus 85 ~~~-----~~~~D~i~~~~~~--------~~~~~~~~~~L~~gG~lv 118 (216)
..+ .+++|+|++-..- +.++..+.+.|||||.++
T Consensus 485 ~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 485 PGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 331 4679999985441 234555668999999754
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.58 E-value=1.6e-07 Score=73.09 Aligned_cols=87 Identities=21% Similarity=0.158 Sum_probs=70.0
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
|...+++.+. ++++..++|.+||.|..+..+++. +++|+|+|.++.+++.|++ +.. .++.++++++
T Consensus 10 Ll~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~--------~rv~lv~~~f 75 (285)
T 1wg8_A 10 LYQEALDLLA--VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL--------PGLTVVQGNF 75 (285)
T ss_dssp THHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC--------TTEEEEESCG
T ss_pred HHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc--------CCEEEEECCc
Confidence 5677888886 578999999999999999999987 4599999999999999987 532 5799999997
Q ss_pred CCCC--C---CCCCccEEEecCCCCc
Q psy14962 82 RTGL--L---HQAPFDAIYLSTYVPE 102 (216)
Q Consensus 82 ~~~~--~---~~~~~D~i~~~~~~~~ 102 (216)
.... . ..+++|.|+.+.+...
T Consensus 76 ~~l~~~L~~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 76 RHLKRHLAALGVERVDGILADLGVSS 101 (285)
T ss_dssp GGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred chHHHHHHHcCCCCcCEEEeCCcccc
Confidence 6321 1 1257999999888654
No 285
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.57 E-value=7.6e-07 Score=76.07 Aligned_cols=116 Identities=19% Similarity=0.142 Sum_probs=83.7
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCC------------CcEEEEEeCCHHHHHHHHHHHHHhCCCCC
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGK------------TGRVFGVEHMREQCEDAWETVMRIRPDLL 69 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~ 69 (216)
++..|++++. ..++.+|+|-+||+|.+...+.+++.. ...++|+|+++.+...|+-++.-++.
T Consensus 205 Vv~lmv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~--- 279 (530)
T 3ufb_A 205 VVRFMVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL--- 279 (530)
T ss_dssp HHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC---
Confidence 3456666665 367889999999999998887665421 13699999999999999888777663
Q ss_pred CCCCeEEEeccCCCCCC----CCCCccEEEecCCCCc----------------------hHHHHHhcCC-------CCeE
Q psy14962 70 NDGRLHLRCRDGRTGLL----HQAPFDAIYLSTYVPE----------------------IPYSILLQLK-------PGGR 116 (216)
Q Consensus 70 ~~~~~~~~~~d~~~~~~----~~~~~D~i~~~~~~~~----------------------~~~~~~~~L~-------~gG~ 116 (216)
...++..+|...... ...+||+|++++|+.. ++..+.+.|| +||+
T Consensus 280 --~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr 357 (530)
T 3ufb_A 280 --EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGR 357 (530)
T ss_dssp --SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCE
T ss_pred --ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCce
Confidence 455677888653321 2357999999999731 2345566665 7999
Q ss_pred EEEeecCC
Q psy14962 117 LVCGVGKS 124 (216)
Q Consensus 117 lv~~~~~~ 124 (216)
+.+.+++.
T Consensus 358 ~avVlP~g 365 (530)
T 3ufb_A 358 AAVVVPNG 365 (530)
T ss_dssp EEEEEEHH
T ss_pred EEEEecch
Confidence 98887764
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.57 E-value=8.5e-08 Score=74.47 Aligned_cols=105 Identities=15% Similarity=0.097 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHh------CCC-----cEEEEEeCCH---HHHH-----------HHHHHHHHhCCC--
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELV------GKT-----GRVFGVEHMR---EQCE-----------DAWETVMRIRPD-- 67 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~------~~~-----~~v~~~D~~~---~~~~-----------~a~~~~~~~~~~-- 67 (216)
.++.+|||+|+|+|+.+..+++.. +|. .+++++|..| +.+. .|++.+..+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 355789999999999988877654 453 4899999876 4443 455554431100
Q ss_pred -------CCCCCCeEEEeccCCCCCCC--C---CCccEEEecCCC---------CchHHHHHhcCCCCeEEEE
Q psy14962 68 -------LLNDGRLHLRCRDGRTGLLH--Q---APFDAIYLSTYV---------PEIPYSILLQLKPGGRLVC 119 (216)
Q Consensus 68 -------~~~~~~~~~~~~d~~~~~~~--~---~~~D~i~~~~~~---------~~~~~~~~~~L~~gG~lv~ 119 (216)
.-+..+++++.+|+...... . +.||+|+.+.-. ..++..+.++|+|||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 00124577888997643221 1 379999997532 2267899999999999986
No 287
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.54 E-value=3e-07 Score=72.16 Aligned_cols=103 Identities=9% Similarity=0.082 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC----CCcEEEEEeCCHH--------------------------HHHHHHHHHHHhC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG----KTGRVFGVEHMRE--------------------------QCEDAWETVMRIR 65 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~----~~~~v~~~D~~~~--------------------------~~~~a~~~~~~~~ 65 (216)
....|||+|+..|+.++.++..+. ++.+++++|..+. .++.+++++.+.+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 456999999999999988877653 3568999996421 4667888888866
Q ss_pred CCCCCCCCeEEEeccCCCCCC--CCCCccEEEecCCCCc----hHHHHHhcCCCCeEEEEee
Q psy14962 66 PDLLNDGRLHLRCRDGRTGLL--HQAPFDAIYLSTYVPE----IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 66 ~~~~~~~~~~~~~~d~~~~~~--~~~~~D~i~~~~~~~~----~~~~~~~~L~~gG~lv~~~ 121 (216)
+ ..++++++.+|+.+... ..++||+|+.+..... .++.+...|+|||++++..
T Consensus 186 l---~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 186 L---LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp C---CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred C---CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcC
Confidence 3 13789999999864332 2468999999987632 4678889999999999954
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.45 E-value=1.1e-06 Score=71.02 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=62.5
Q ss_pred CCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
+.+|.+|||+||++|.++..++++ ++.|+++|..+ +-. .+.. ..++.++.+|+....+..+++|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-l~~----~l~~-------~~~V~~~~~d~~~~~~~~~~~D~ 273 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-MAQ----SLMD-------TGQVTWLREDGFKFRPTRSNISW 273 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-CCH----HHHT-------TTCEEEECSCTTTCCCCSSCEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-cCh----hhcc-------CCCeEEEeCccccccCCCCCcCE
Confidence 578999999999999999999887 46999999764 211 1122 26799999998866665678999
Q ss_pred EEecCCCCc--hHHHHHhcCCC
Q psy14962 94 IYLSTYVPE--IPYSILLQLKP 113 (216)
Q Consensus 94 i~~~~~~~~--~~~~~~~~L~~ 113 (216)
|+|+..... ....+.+.|..
T Consensus 274 vvsDm~~~p~~~~~l~~~wl~~ 295 (375)
T 4auk_A 274 MVCDMVEKPAKVAALMAQWLVN 295 (375)
T ss_dssp EEECCSSCHHHHHHHHHHHHHT
T ss_pred EEEcCCCChHHhHHHHHHHHhc
Confidence 999988753 33344443333
No 289
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.37 E-value=7.2e-08 Score=74.76 Aligned_cols=104 Identities=16% Similarity=0.054 Sum_probs=67.2
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.++.+|||+|||+|.++..+++..+ ...|+|+|+...+...+... ... ..++.....+.........++|
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~------~~~-g~~ii~~~~~~dv~~l~~~~~D 158 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR------TTL-GWNLIRFKDKTDVFNMEVIPGD 158 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC------CBT-TGGGEEEECSCCGGGSCCCCCS
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc------ccC-CCceEEeeCCcchhhcCCCCcC
Confidence 367888999999999999998886543 34789999876532111100 000 1233333333222223457899
Q ss_pred EEEecCCCCc------------hHHHHHhcCCCC--eEEEEeecCC
Q psy14962 93 AIYLSTYVPE------------IPYSILLQLKPG--GRLVCGVGKS 124 (216)
Q Consensus 93 ~i~~~~~~~~------------~~~~~~~~L~~g--G~lv~~~~~~ 124 (216)
+|+|+..... ++.-+.++|+|| |.|++-+..+
T Consensus 159 vVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 159 TLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred EEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 9999877541 234456899999 9999998885
No 290
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.33 E-value=8.9e-07 Score=70.56 Aligned_cols=88 Identities=19% Similarity=0.169 Sum_probs=69.3
Q ss_pred hHHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC
Q psy14962 2 QQARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG 81 (216)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 81 (216)
|+..+++.+. +++|..++|..||.|..+..+++.+++.++|+|+|.++.+++.++ ++ ...++.++++++
T Consensus 45 Ll~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--------~~~Rv~lv~~nF 113 (347)
T 3tka_A 45 LLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--------DDPRFSIIHGPF 113 (347)
T ss_dssp TTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--------CCTTEEEEESCG
T ss_pred cHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--------cCCcEEEEeCCH
Confidence 4567777776 678999999999999999999999877889999999999999884 33 136899999887
Q ss_pred CCCC---CC---CCCccEEEecCCC
Q psy14962 82 RTGL---LH---QAPFDAIYLSTYV 100 (216)
Q Consensus 82 ~~~~---~~---~~~~D~i~~~~~~ 100 (216)
.... .. .+++|.|+.+.+.
T Consensus 114 ~~l~~~L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 114 SALGEYVAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp GGHHHHHHHTTCTTCEEEEEEECSC
T ss_pred HHHHHHHHhcCCCCcccEEEECCcc
Confidence 5321 11 1369999987774
No 291
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.28 E-value=8.8e-06 Score=66.47 Aligned_cols=102 Identities=13% Similarity=-0.034 Sum_probs=67.2
Q ss_pred CCeEEEEcCCCchHHHHHHHH-------------h---CCCcEEEEEeCC-----------HHHHHHHHHHHHHhCCCCC
Q psy14962 17 GAKVLDIGSGSGFMSCVFAEL-------------V---GKTGRVFGVEHM-----------REQCEDAWETVMRIRPDLL 69 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~-------------~---~~~~~v~~~D~~-----------~~~~~~a~~~~~~~~~~~~ 69 (216)
.-+|+|+||++|..+..+... . .|..+|+..|+. +.+.+..++ ..+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~--- 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGR--- 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCC---
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccC---
Confidence 467999999999988877654 1 144578888987 444333222 1110
Q ss_pred CCCCeEEEeccCC---CCCCCCCCccEEEecCCCCchH------------------------------------------
Q psy14962 70 NDGRLHLRCRDGR---TGLLHQAPFDAIYLSTYVPEIP------------------------------------------ 104 (216)
Q Consensus 70 ~~~~~~~~~~d~~---~~~~~~~~~D~i~~~~~~~~~~------------------------------------------ 104 (216)
..+..|+.+... ....+.+++|+|+++..++|+.
T Consensus 127 -~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~ 205 (384)
T 2efj_A 127 -KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFT 205 (384)
T ss_dssp -CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHH
T ss_pred -CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHH
Confidence 012356665543 3445678999999999987731
Q ss_pred ---HHHHhcCCCCeEEEEeecCCC
Q psy14962 105 ---YSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 105 ---~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+...+.|+|||++++......
T Consensus 206 ~FL~~Ra~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 206 TFLRIHSEELISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHhccCCeEEEEEecCC
Confidence 122699999999999887664
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.25 E-value=1.3e-06 Score=68.18 Aligned_cols=105 Identities=15% Similarity=0.028 Sum_probs=65.8
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
.+.++.+|||+||++|.++..+++..+ ...|+|+|+...+...... ... . ..++.....+........+++|
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~-----~-~~~iv~~~~~~di~~l~~~~~D 149 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQT-----L-GWNIVKFKDKSNVFTMPTEPSD 149 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCB-----T-TGGGEEEECSCCTTTSCCCCCS
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccc-----c-CCceEEeecCceeeecCCCCcC
Confidence 357899999999999999999997642 3478999986532100000 000 0 0122222222222223356899
Q ss_pred EEEecCCCC------------chHHHHHhcCCCC-eEEEEeecCCC
Q psy14962 93 AIYLSTYVP------------EIPYSILLQLKPG-GRLVCGVGKSK 125 (216)
Q Consensus 93 ~i~~~~~~~------------~~~~~~~~~L~~g-G~lv~~~~~~~ 125 (216)
+|+++.... .++.-+.++|+|| |.|++-+..++
T Consensus 150 lVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y 195 (300)
T 3eld_A 150 TLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY 195 (300)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT
T ss_pred EEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc
Confidence 999986654 1334556899999 99999988843
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.20 E-value=4e-06 Score=66.40 Aligned_cols=56 Identities=27% Similarity=0.285 Sum_probs=46.6
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHh
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRI 64 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~ 64 (216)
+..++.... .+|+.|||++||+|..+..+++. +.+++|+|+++.+++.|++++...
T Consensus 225 ~~~~i~~~~---~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 225 AERLVRMFS---FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHC---CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC---CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 444555443 68999999999999999988876 459999999999999999998764
No 294
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.18 E-value=1.6e-06 Score=66.23 Aligned_cols=95 Identities=17% Similarity=0.041 Sum_probs=61.8
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCC---CcEEEEEeC--CHHHHHHHHHHHHHhCCCCCCCCCe---EEEec-cCCC
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGK---TGRVFGVEH--MREQCEDAWETVMRIRPDLLNDGRL---HLRCR-DGRT 83 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~---~~~v~~~D~--~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~-d~~~ 83 (216)
.++||.+|+|+||++|.++..+++..+. .+.++++|. .|-. +. ...+ .+..+ |+..
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~--------------~~-~~Gv~~i~~~~G~Df~~ 134 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPML--------------MQ-SYGWNIVTMKSGVDVFY 134 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCC--------------CC-STTGGGEEEECSCCGGG
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCc--------------cc-CCCceEEEeeccCCccC
Confidence 4789999999999999999999887221 124455552 1100 00 0123 34435 8764
Q ss_pred CCCCCCCccEEEecCCCCc------------hHHHHHhcCCCCe-EEEEeecCC
Q psy14962 84 GLLHQAPFDAIYLSTYVPE------------IPYSILLQLKPGG-RLVCGVGKS 124 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~------------~~~~~~~~L~~gG-~lv~~~~~~ 124 (216)
. ...++|+|+|+..-.. .++-+.++|+||| .|++-+..+
T Consensus 135 ~--~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 135 K--PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp S--CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred C--CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 2 2457999999876421 2344558999999 999988775
No 295
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.15 E-value=1.5e-05 Score=64.95 Aligned_cols=108 Identities=10% Similarity=0.018 Sum_probs=66.5
Q ss_pred CCeEEEEcCCCchHHHHHHH--------Hh------CCCcEEEEEeCCHHHHHHHHHHHHHhCC-------CCCCCCCeE
Q psy14962 17 GAKVLDIGSGSGFMSCVFAE--------LV------GKTGRVFGVEHMREQCEDAWETVMRIRP-------DLLNDGRLH 75 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~--------~~------~~~~~v~~~D~~~~~~~~a~~~~~~~~~-------~~~~~~~~~ 75 (216)
.-+|+|+|||+|..+..+.. .. .|..+|+..|+....-...-+.+....- ......+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 46799999999998877632 21 1456888889877654333222221100 000001122
Q ss_pred EEec---cCCCCCCCCCCccEEEecCCCCch--------------------------------------------HHHHH
Q psy14962 76 LRCR---DGRTGLLHQAPFDAIYLSTYVPEI--------------------------------------------PYSIL 108 (216)
Q Consensus 76 ~~~~---d~~~~~~~~~~~D~i~~~~~~~~~--------------------------------------------~~~~~ 108 (216)
|+.+ .+.....+.+++|+|+++..++|+ ++...
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 233344567899999999998873 23457
Q ss_pred hcCCCCeEEEEeecCC
Q psy14962 109 LQLKPGGRLVCGVGKS 124 (216)
Q Consensus 109 ~~L~~gG~lv~~~~~~ 124 (216)
+.|+|||+++++....
T Consensus 213 ~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHEEEEEEEEEEEEEC
T ss_pred HHhCCCCEEEEEEecC
Confidence 9999999999987644
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.07 E-value=2e-05 Score=59.45 Aligned_cols=104 Identities=16% Similarity=0.053 Sum_probs=71.8
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec-cCCCCCCCCCCc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR-DGRTGLLHQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 91 (216)
.+.++.+|+|+||++|.++..++...+. ..|+++|+...-.+. -..+..++...++|..+ |+.... ..++
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ghe~------P~~~~s~gwn~v~fk~gvDv~~~~--~~~~ 145 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEE------PVPMSTYGWNIVKLMSGKDVFYLP--PEKC 145 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCSTTSCC------CCCCCCTTTTSEEEECSCCGGGCC--CCCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCCCccC------cchhhhcCcCceEEEeccceeecC--Cccc
Confidence 3678999999999999999988877543 389999986642210 00011234567899988 864332 2569
Q ss_pred cEEEecCCCCc------------hHHHHHhcCCCCeEEEEeecCCCC
Q psy14962 92 DAIYLSTYVPE------------IPYSILLQLKPGGRLVCGVGKSKS 126 (216)
Q Consensus 92 D~i~~~~~~~~------------~~~~~~~~L~~gG~lv~~~~~~~~ 126 (216)
|.|+|+..-.. .++.+.+.|++ |.+++-+..++.
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 99999876421 23445688998 788888887764
No 297
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.94 E-value=1e-05 Score=65.51 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=69.3
Q ss_pred CeEEEEcCCCchHHHHHHHH---------------hCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC-
Q psy14962 18 AKVLDIGSGSGFMSCVFAEL---------------VGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG- 81 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~---------------~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~- 81 (216)
-+|+|+||++|..+..+... -.|..+|+..|+.......+-+.+.... ...+..|+.+..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~~~~~~f~~gvpg 128 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----DVDGVCFINGVPG 128 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----SCTTCEEEEEEES
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc----ccCCCEEEEecch
Confidence 56899999999766544322 1245688999998887666555443210 001334555443
Q ss_pred --CCCCCCCCCccEEEecCCCCch---------------------------------------HHHHHhcCCCCeEEEEe
Q psy14962 82 --RTGLLHQAPFDAIYLSTYVPEI---------------------------------------PYSILLQLKPGGRLVCG 120 (216)
Q Consensus 82 --~~~~~~~~~~D~i~~~~~~~~~---------------------------------------~~~~~~~L~~gG~lv~~ 120 (216)
...+.+.+++|+|+++..++|+ ++...+.|+|||++++.
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 3355567899999999998763 33447999999999998
Q ss_pred ecCCC
Q psy14962 121 VGKSK 125 (216)
Q Consensus 121 ~~~~~ 125 (216)
.....
T Consensus 209 ~~gr~ 213 (359)
T 1m6e_X 209 ILGRR 213 (359)
T ss_dssp EEECS
T ss_pred EecCC
Confidence 76554
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.94 E-value=4.9e-05 Score=59.23 Aligned_cols=104 Identities=14% Similarity=0.016 Sum_probs=68.6
Q ss_pred cCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec-cCCCCCCCCCCc
Q psy14962 13 KIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR-DGRTGLLHQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 91 (216)
.+.++.+|||+||++|.++..++...+. ..|+|+|+...--+. -..+.+++..-+.+... |+..... .++
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~~he~------P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~ 161 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGPGHEE------PQLVQSYGWNIVTMKSGVDVFYRPS--ECC 161 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCSTTSCC------CCCCCBTTGGGEEEECSCCTTSSCC--CCC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCCCccC------cchhhhcCCcceEEEeccCHhhCCC--CCC
Confidence 4678899999999999999988877543 379999986651100 00000122234677766 6543322 569
Q ss_pred cEEEecCCCCc------------hHHHHHhcCCCC-eEEEEeecCCC
Q psy14962 92 DAIYLSTYVPE------------IPYSILLQLKPG-GRLVCGVGKSK 125 (216)
Q Consensus 92 D~i~~~~~~~~------------~~~~~~~~L~~g-G~lv~~~~~~~ 125 (216)
|+|+|+.+-.. .++.+.+.|++| |-|++-+..|+
T Consensus 162 D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 162 DTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred CEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 99999877211 234445788998 89999888884
No 299
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.91 E-value=5.4e-05 Score=61.20 Aligned_cols=72 Identities=21% Similarity=0.175 Sum_probs=55.6
Q ss_pred hHHHHHHHhcccCC----CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEE
Q psy14962 2 QQARIIELLEPKIQ----EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLR 77 (216)
Q Consensus 2 ~~~~~~~~l~~~~~----~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 77 (216)
++..|++.+...-. +++.|||||+|.|.+|..++.... ..+|+++|+++.++...++.. . .+++.++
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~-------~~~l~ii 110 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E-------GSPLQIL 110 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T-------TSSCEEE
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c-------CCCEEEE
Confidence 35667777652111 468999999999999999998743 248999999999998887765 2 2689999
Q ss_pred eccCC
Q psy14962 78 CRDGR 82 (216)
Q Consensus 78 ~~d~~ 82 (216)
.+|+.
T Consensus 111 ~~D~l 115 (353)
T 1i4w_A 111 KRDPY 115 (353)
T ss_dssp CSCTT
T ss_pred ECCcc
Confidence 99985
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.85 E-value=4.5e-05 Score=59.16 Aligned_cols=55 Identities=25% Similarity=0.192 Sum_probs=45.7
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHH
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMR 63 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~ 63 (216)
+..+++.. ..+|+.|||..||+|..+..+.+. +.+++|+|+++..++.+++++..
T Consensus 202 ~~~~i~~~---~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 202 IERIIRAS---SNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHH---CCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHh
Confidence 44455544 368999999999999999987776 45999999999999999999875
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.73 E-value=9.4e-05 Score=57.63 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcC------CCchHHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC
Q psy14962 14 IQEGAKVLDIGS------GSGFMSCVFAELVGKT-GRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL 86 (216)
Q Consensus 14 ~~~~~~vldiG~------G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (216)
++.|.+|||+|+ .+|. .+++...+. +.|+++|+.+-.. ..-.++.+|... ..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS---~VLr~~~p~g~~VVavDL~~~~s-----------------da~~~IqGD~~~-~~ 165 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT---AVLRQWLPTGTLLVDSDLNDFVS-----------------DADSTLIGDCAT-VH 165 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH---HHHHHHSCTTCEEEEEESSCCBC-----------------SSSEEEESCGGG-EE
T ss_pred ecCCCEEEeCCCCCCCCCCCcH---HHHHHhCCCCcEEEEeeCccccc-----------------CCCeEEEccccc-cc
Confidence 567899999997 5566 345555564 5999999876321 112458888643 22
Q ss_pred CCCCccEEEecCCCC-----------------chHHHHHhcCCCCeEEEEeecCCCC
Q psy14962 87 HQAPFDAIYLSTYVP-----------------EIPYSILLQLKPGGRLVCGVGKSKS 126 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~-----------------~~~~~~~~~L~~gG~lv~~~~~~~~ 126 (216)
..++||+|+++..-. ..++-+.+.|+|||.|++-+.....
T Consensus 166 ~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 166 TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 357899999987631 1234567899999999998877654
No 302
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.64 E-value=0.00015 Score=58.56 Aligned_cols=92 Identities=22% Similarity=0.158 Sum_probs=69.7
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCc
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 91 (216)
.+++|++||-+|+|. |..+..+++..+ ++|+++|.+++.++.+++. | .+. ++ .+.. .. ...+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~~--v~-~~~~-~~--~~~~ 235 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALSM----G-----VKH--FY-TDPK-QC--KEEL 235 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHHT----T-----CSE--EE-SSGG-GC--CSCE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhc----C-----CCe--ec-CCHH-HH--hcCC
Confidence 478999999999987 888999998864 5999999999888877652 2 122 22 2221 11 1269
Q ss_pred cEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 92 DAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 92 D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
|+|+...+....+....+.|+++|+++..-
T Consensus 236 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 236 DFIISTIPTHYDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEEEECCCSCCCHHHHHTTEEEEEEEEECC
T ss_pred CEEEECCCcHHHHHHHHHHHhcCCEEEEEC
Confidence 999988887777888999999999998864
No 303
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.57 E-value=0.00015 Score=58.86 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=71.5
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcE-EEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec-----cCCC--
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGR-VFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR-----DGRT-- 83 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----d~~~-- 83 (216)
.+++|++||-+|+|. |..+..+++..+ ++ |+++|.+++.++.+++. .. .-+.+... |...
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l-~~--------~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAG--ACPLVITDIDEGRLKFAKEI-CP--------EVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEEESCHHHHHHHHHH-CT--------TCEEEECCSCCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh-ch--------hcccccccccchHHHHHHH
Confidence 478999999999987 889999999864 45 99999999999988875 22 12222211 1110
Q ss_pred -CCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 84 -GLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 84 -~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.......+|+|+-.......+....++|+++|+++..-
T Consensus 245 ~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 245 VESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECC
T ss_pred HHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEc
Confidence 01123469999998887777788999999999998753
No 304
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.55 E-value=0.00041 Score=56.40 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=69.2
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC---CC--C
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT---GL--L 86 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~---~~--~ 86 (216)
.+++|++||.+|+|. |..+..+++..+. ..|+++|.+++.++.+++. | .+ .++..+-.. .. .
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a~~l----G-----a~--~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQL----G-----AT--HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHHH----T-----CS--EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHHc----C-----CC--EEecCCccCHHHHHHHh
Confidence 468899999999988 8888999988742 2799999999988887653 1 11 122211110 00 0
Q ss_pred CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 87 HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
..+.+|+|+........+....+.|+++|++++.-
T Consensus 255 ~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 255 TDGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp TTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeC
Confidence 12369999988877677788999999999998753
No 305
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.51 E-value=5.8e-05 Score=61.54 Aligned_cols=93 Identities=22% Similarity=0.204 Sum_probs=68.1
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec---cCCCCCCCC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR---DGRTGLLHQ 88 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~ 88 (216)
.+++|++||.+|+|. |..+..+++.. +++|++++.+++.++.+++. | .+ .++.. +......
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~l----G-----a~--~vi~~~~~~~~~~~~-- 255 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKAL----G-----AD--EVVNSRNADEMAAHL-- 255 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH----T-----CS--EEEETTCHHHHHTTT--
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C-----Cc--EEeccccHHHHHHhh--
Confidence 478999999999987 88888899886 45899999999988877652 2 11 12211 1001111
Q ss_pred CCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 89 APFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 89 ~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
+.+|+|+...+....+....+.|+++|+++..
T Consensus 256 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 256 KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp TCEEEEEECCSSCCCHHHHHTTEEEEEEEEEC
T ss_pred cCCCEEEECCCCHHHHHHHHHHhccCCEEEEe
Confidence 46999998887777778889999999998875
No 306
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.50 E-value=9.3e-05 Score=59.82 Aligned_cols=96 Identities=19% Similarity=0.131 Sum_probs=68.3
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc----CCCCC--
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD----GRTGL-- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d----~~~~~-- 85 (216)
.+++|++||.+|+|. |..+..+++..+ ++|+++|.+++.++.+++. | .+ .++..+ .....
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~--~~~~~~~~~~~~~~i~~ 231 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKNC----G-----AD--VTLVVDPAKEEESSIIE 231 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHT----T-----CS--EEEECCTTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHHh----C-----CC--EEEcCcccccHHHHHHH
Confidence 468899999999987 888888898864 4799999999988877642 2 12 122111 10000
Q ss_pred -CC---CCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 -LH---QAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 -~~---~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.. ...+|+|+...+....+....+.|+++|+++..-
T Consensus 232 ~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 232 RIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECS
T ss_pred HhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEe
Confidence 01 2469999988877767788899999999998753
No 307
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.49 E-value=0.00031 Score=56.86 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=68.4
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc------CCCC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD------GRTG 84 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d------~~~~ 84 (216)
.+++|++||.+|+|. |..+..+++.. ++ +|+++|.+++.++.+++. | .+ .++..+ ....
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l----G-----a~--~vi~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEI----G-----AD--LVLQISKESPQEIARK 234 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT----T-----CS--EEEECSSCCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh----C-----CC--EEEcCcccccchHHHH
Confidence 468899999999987 88889999885 44 899999999888777642 2 12 122111 0000
Q ss_pred C--CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 L--LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 ~--~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
. .....+|+|+...+....+....+.|+++|+++..-
T Consensus 235 i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 235 VEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECS
T ss_pred HHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEe
Confidence 0 001469999988877767788899999999998753
No 308
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.49 E-value=0.00029 Score=56.87 Aligned_cols=97 Identities=21% Similarity=0.189 Sum_probs=70.3
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC---C---C
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR---T---G 84 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~---~---~ 84 (216)
.+++|++||-+|+|+ |..+..+++.. ++ +|+++|.+++.++.+++.-. + .++..+-. . .
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa---------~--~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHL--GAGRIFAVGSRKHCCDIALEYGA---------T--DIINYKNGDIVEQILK 229 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTT--TCSSEEEECCCHHHHHHHHHHTC---------C--EEECGGGSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEECCCHHHHHHHHHhCC---------c--eEEcCCCcCHHHHHHH
Confidence 468999999999988 88889999875 34 79999999998887765411 1 12221111 0 0
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 85 LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
......+|+|+........+....+.|+++|+++..-.
T Consensus 230 ~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 230 ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp HTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCC
T ss_pred HcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecc
Confidence 11234699999888877788999999999999987643
No 309
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.48 E-value=0.00058 Score=55.56 Aligned_cols=97 Identities=23% Similarity=0.157 Sum_probs=69.6
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec---cCC---CC-
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR---DGR---TG- 84 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---d~~---~~- 84 (216)
.+++|++||-.|+|. |..+..+++..+. ..|+++|.+++.++.+++.-. + .++.. |.. ..
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~lGa---------~--~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGA-TTVILSTRQATKRRLAEEVGA---------T--ATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHTC---------S--EEECTTSSCHHHHHHST
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHcCC---------C--EEECCCCcCHHHHHHhh
Confidence 478999999999987 8888999988642 289999999998887765311 1 12211 110 00
Q ss_pred -CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 -LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 -~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
....+.+|+|+-..+.........+.|+++|++++.-
T Consensus 247 ~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 247 VGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECS
T ss_pred hhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEe
Confidence 0112479999988877777889999999999998853
No 310
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.44 E-value=2.7e-05 Score=60.68 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=75.1
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC
Q psy14962 4 ARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT 83 (216)
Q Consensus 4 ~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 83 (216)
..+.+.+.. + .+..+||+-+|||.++.++++. +.+++.+|.++...+..++++.. ..+++++..|+..
T Consensus 81 ~~yf~~l~~-~-n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~-------~~~~~V~~~D~~~ 148 (283)
T 2oo3_A 81 LEYISVIKQ-I-NLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF-------NKKVYVNHTDGVS 148 (283)
T ss_dssp HHHHHHHHH-H-SSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT-------TSCEEEECSCHHH
T ss_pred HHHHHHHHH-h-cCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc-------CCcEEEEeCcHHH
Confidence 345555543 3 3567999999999999998884 34999999999999888877654 3678999999642
Q ss_pred CC----CCCCCccEEEecCCCCc--hH----HHHH--hcCCCCeEEEE
Q psy14962 84 GL----LHQAPFDAIYLSTYVPE--IP----YSIL--LQLKPGGRLVC 119 (216)
Q Consensus 84 ~~----~~~~~~D~i~~~~~~~~--~~----~~~~--~~L~~gG~lv~ 119 (216)
.. .+..+||+|+++.++.. .. +.+. ..+.++|++++
T Consensus 149 ~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 149 KLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 11 23356999999999972 22 2222 25567888877
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.41 E-value=0.00064 Score=55.83 Aligned_cols=95 Identities=16% Similarity=0.113 Sum_probs=66.9
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC-C-----
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG-L----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~----- 85 (216)
.+++|++||.+|+|. |..+..+++..+. .+|+++|.+++.++.+++. | ..++..+-... .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l----G--------a~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGA-ACVIVGDQNPERLKLLSDA----G--------FETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHTT----T--------CEEEETTSSSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHHc----C--------CcEEcCCCcchHHHHHHH
Confidence 468999999999988 8899999998642 2899999999988776532 1 22232111111 0
Q ss_pred -CCCCCccEEEecCCCCc--------------hHHHHHhcCCCCeEEEEe
Q psy14962 86 -LHQAPFDAIYLSTYVPE--------------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~~~--------------~~~~~~~~L~~gG~lv~~ 120 (216)
.....+|+|+-...... .+....+.|+++|++++.
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 11236999998776542 578889999999998765
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.41 E-value=0.00047 Score=55.34 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=69.4
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC---CC-C
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG---LL-H 87 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~ 87 (216)
.+++|++||..|+|. |..+..+++..+ ++|+++|.+++.++.+++. | .+ .++...-... .. .
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~--~~i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARRL----G-----AE--VAVNARDTDPAAWLQKE 229 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHT----T-----CS--EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHc----C-----CC--EEEeCCCcCHHHHHHHh
Confidence 468999999999987 999999999864 5999999999988877653 1 11 1221111100 00 1
Q ss_pred CCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 88 QAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.+.+|+|+........+....+.|+++|+++..-
T Consensus 230 ~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 230 IGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp HSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeC
Confidence 1368999988777778889999999999998753
No 313
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.40 E-value=4.2e-05 Score=61.66 Aligned_cols=97 Identities=13% Similarity=0.053 Sum_probs=68.8
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe----ccCCCCCCC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC----RDGRTGLLH 87 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~----~d~~~~~~~ 87 (216)
.+ +|++||.+|+|. |..+..+++...++++|+++|.+++.++.+++. | .+. ++. .|.......
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----G-----a~~--vi~~~~~~~~~~~~~~ 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----G-----ADY--VSEMKDAESLINKLTD 235 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----T-----CSE--EECHHHHHHHHHHHHT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----C-----CCE--EeccccchHHHHHhhc
Confidence 46 899999999987 888899999872234899999999988877653 1 111 221 111111111
Q ss_pred CCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 88 QAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
...+|+|+.............+.|+++|+++..-
T Consensus 236 g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 236 GLGASIAIDLVGTEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp TCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCccEEEECCCChHHHHHHHHHhhcCCEEEEeC
Confidence 2369999998887767788899999999988753
No 314
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.37 E-value=0.00041 Score=55.84 Aligned_cols=98 Identities=14% Similarity=0.077 Sum_probs=71.2
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC--CC---CC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR--TG---LL 86 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~--~~---~~ 86 (216)
.+++|++||-+|+|. |..+..+++..+ +.+|+++|.+++.++.+++. | .+. ++..+-. .. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~l----G-----a~~--~i~~~~~~~~~v~~~t 235 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAREV----G-----ADA--AVKSGAGAADAIRELT 235 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHHT----T-----CSE--EEECSTTHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHHc----C-----CCE--EEcCCCcHHHHHHHHh
Confidence 478999999999987 889999998874 45999999999988877653 1 121 2221110 00 01
Q ss_pred CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 87 HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
....+|+|+-..+....+....+.|+++|+++..-.
T Consensus 236 ~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECC
Confidence 123699999988877788899999999999987643
No 315
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.33 E-value=0.0004 Score=55.15 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=61.7
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCc
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPF 91 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 91 (216)
.+++|++||-.|+|. |..+..+++..+ ++|++++ +++.++.+++. | .+.+..| .... ...+
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~l----G--------a~~v~~d-~~~v--~~g~ 200 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAKR----G--------VRHLYRE-PSQV--TQKY 200 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHHH----T--------EEEEESS-GGGC--CSCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHHc----C--------CCEEEcC-HHHh--CCCc
Confidence 467899999999977 899999999875 4999999 88888777653 1 1211123 2111 4579
Q ss_pred cEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 92 DAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 92 D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
|+|+-...-... ....++|+++|+++..
T Consensus 201 Dvv~d~~g~~~~-~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIFDAVNSQNA-AALVPSLKANGHIICI 228 (315)
T ss_dssp EEEECC--------TTGGGEEEEEEEEEE
T ss_pred cEEEECCCchhH-HHHHHHhcCCCEEEEE
Confidence 999977665544 5678999999999886
No 316
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.32 E-value=0.00098 Score=54.03 Aligned_cols=96 Identities=20% Similarity=0.177 Sum_probs=68.3
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC------CC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT------GL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~------~~ 85 (216)
.+++|++||-+|+|. |..+..+++..+ ++|+++|.+++.++.+++. | .+ .++..+... ..
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~--~vi~~~~~~~~~~v~~~ 252 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFAL----G-----AD--HGINRLEEDWVERVYAL 252 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH----T-----CS--EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHHc----C-----CC--EEEcCCcccHHHHHHHH
Confidence 468899999999887 888889998864 5999999999988877653 2 11 122211110 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
..+..+|+|+...+ ...+....+.|+++|++++.-.
T Consensus 253 ~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 253 TGDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp HTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEECC
T ss_pred hCCCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEec
Confidence 11236999998777 5567888899999999987643
No 317
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.29 E-value=0.00057 Score=55.83 Aligned_cols=96 Identities=21% Similarity=0.145 Sum_probs=68.4
Q ss_pred CCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc------CCC---
Q psy14962 14 IQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD------GRT--- 83 (216)
Q Consensus 14 ~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d------~~~--- 83 (216)
+++|++||.+|+|. |..+..+++..+ ..+|++++.+++.++.+++. | .+ .++..+ ...
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~l----G-----a~--~vi~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEEI----G-----AD--LTLNRRETSVEERRKAIM 260 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHHT----T-----CS--EEEETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHHc----C-----Cc--EEEeccccCcchHHHHHH
Confidence 67899999999877 888899998863 14999999999888877642 2 12 122211 100
Q ss_pred CCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 84 GLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.......+|+|+-.......+....+.|+++|+++..-
T Consensus 261 ~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 261 DITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECC
T ss_pred HHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEe
Confidence 01112369999988887777888999999999988753
No 318
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.27 E-value=6.5e-05 Score=60.96 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=67.2
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC---CCCCCCC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG---RTGLLHQ 88 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~ 88 (216)
.+++|++||.+|+|. |..+..+++..+ ++|++++.+++.++.+++. | .+.+ +...+. .....
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~~v-~~~~~~~~~~~~~~-- 241 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMKM----G-----ADHY-IATLEEGDWGEKYF-- 241 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHHH----T-----CSEE-EEGGGTSCHHHHSC--
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHc----C-----CCEE-EcCcCchHHHHHhh--
Confidence 478899999999977 888889998874 4899999999888877653 1 1111 111111 00111
Q ss_pred CCccEEEecCCC--CchHHHHHhcCCCCeEEEEee
Q psy14962 89 APFDAIYLSTYV--PEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 89 ~~~D~i~~~~~~--~~~~~~~~~~L~~gG~lv~~~ 121 (216)
+.+|+|+...+. ...+....+.|+++|+++..-
T Consensus 242 ~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 242 DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECC
T ss_pred cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEec
Confidence 469999988776 566677889999999988753
No 319
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.24 E-value=0.0016 Score=53.48 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=66.9
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC------
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL------ 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 85 (216)
.+++|++||.+|+|. |..+..+++..+. ..|+++|.+++.++.+++. | .+++.-.-....
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a~~l----G--------a~~i~~~~~~~~~~~v~~ 248 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKAQ----G--------FEIADLSLDTPLHEQIAA 248 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHT----T--------CEEEETTSSSCHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHc----C--------CcEEccCCcchHHHHHHH
Confidence 468899999999988 8899999998642 2799999999988877642 1 222221111100
Q ss_pred -CCCCCccEEEecCCCCc---------------hHHHHHhcCCCCeEEEEe
Q psy14962 86 -LHQAPFDAIYLSTYVPE---------------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~~~---------------~~~~~~~~L~~gG~lv~~ 120 (216)
.....+|+|+-..+... .+....++|+++|++++.
T Consensus 249 ~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 249 LLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp HHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 11236999998766542 578888999999999775
No 320
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.21 E-value=0.0015 Score=53.03 Aligned_cols=97 Identities=20% Similarity=0.152 Sum_probs=68.6
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc-CCCCC-----
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD-GRTGL----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d-~~~~~----- 85 (216)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++. | .+ .++..+ .....
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l----G-----a~--~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIEL----G-----AT--ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHT----T-----CS--EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHHc----C-----Cc--EEEecccccchHHHHHH
Confidence 467899999999987 8888999988742 2899999999888877642 2 11 122111 00000
Q ss_pred -CCCCCccEEEecCCCCchHHHHHhcCCCC-eEEEEee
Q psy14962 86 -LHQAPFDAIYLSTYVPEIPYSILLQLKPG-GRLVCGV 121 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 121 (216)
...+.+|+|+-.......+....+.|+++ |+++..-
T Consensus 256 ~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 256 EKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred HHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEc
Confidence 01236999998887767778889999999 9988754
No 321
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.21 E-value=0.0012 Score=53.76 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=69.3
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc-CCCCC-----
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD-GRTGL----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d-~~~~~----- 85 (216)
.+++|++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++. | .+. ++... .....
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~Vi~~~~~~~~~~~a~~l----G-----a~~--vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRIIGIDIDSKKYETAKKF----G-----VNE--FVNPKDHDKPIQEVIV 257 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTC-SCEEEECSCTTHHHHHHTT----T-----CCE--EECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHc----C-----CcE--EEccccCchhHHHHHH
Confidence 467899999999987 8899999998742 2899999999988877642 1 121 22111 00000
Q ss_pred -CCCCCccEEEecCCCCchHHHHHhcCCCC-eEEEEee
Q psy14962 86 -LHQAPFDAIYLSTYVPEIPYSILLQLKPG-GRLVCGV 121 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 121 (216)
...+.+|+|+........+....+.|++| |++++.-
T Consensus 258 ~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEc
Confidence 11237999999888777888999999997 9988754
No 322
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.20 E-value=0.00027 Score=56.87 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=67.7
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCC-eEEEeccCCC---CCCC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGR-LHLRCRDGRT---GLLH 87 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~d~~~---~~~~ 87 (216)
.+++|++||-+|+|+ |..+..+++..+ +.+|+++|.+++.++.+++... +. ++....|... ....
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~~Ga---------~~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKKIGA---------DVTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHHTTC---------SEEEEC-CCCHHHHHHHHTT
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhhcCC---------eEEEeCCCCCHHHHhhhhcC
Confidence 468899999999988 566667776643 4699999999988777665321 11 1111111110 1112
Q ss_pred CCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 88 QAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
...+|.++........+....+.|+++|++++.-.
T Consensus 230 g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEEeccCcchhheeheeecCCceEEEEec
Confidence 34578888888877788889999999999987643
No 323
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=97.18 E-value=0.0019 Score=52.34 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=66.2
Q ss_pred CCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc--CC---CCCCCC
Q psy14962 16 EGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD--GR---TGLLHQ 88 (216)
Q Consensus 16 ~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d--~~---~~~~~~ 88 (216)
+|++||-.| +|. |..+..+++..+ +.+|++++.+++.++.+++. | .+. ++... .. ... ..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~l----G-----ad~--vi~~~~~~~~~v~~~-~~ 237 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKSL----G-----AHH--VIDHSKPLAAEVAAL-GL 237 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHHT----T-----CSE--EECTTSCHHHHHHTT-CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHc----C-----CCE--EEeCCCCHHHHHHHh-cC
Confidence 788999998 666 899999998753 45999999999888877652 2 111 22111 00 011 23
Q ss_pred CCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 89 APFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 89 ~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
+.+|+|+...+....+....++|+++|+++..
T Consensus 238 ~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 238 GAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred CCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 57999998877666778889999999999876
No 324
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.18 E-value=0.0016 Score=51.89 Aligned_cols=96 Identities=17% Similarity=0.208 Sum_probs=67.2
Q ss_pred cCCCCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC------C
Q psy14962 13 KIQEGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT------G 84 (216)
Q Consensus 13 ~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~------~ 84 (216)
.+++|++||-.| +|. |..+..+++..+ ++|++++.+++.++.+++. + .. .++..+-.. .
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~----G------a~-~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAKAL----G------AW-ETIDYSHEDVAKRVLE 203 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHHH----T------CS-EEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHc----C------CC-EEEeCCCccHHHHHHH
Confidence 467899999999 555 888888888864 5999999999988877653 1 11 122111110 0
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 85 LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
......+|+|+.+... .......++|+++|+++..-.
T Consensus 204 ~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 204 LTDGKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp HTTTCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEec
Confidence 0122469999987776 566788999999999988643
No 325
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.17 E-value=0.0017 Score=52.82 Aligned_cols=96 Identities=13% Similarity=0.074 Sum_probs=68.1
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec-cCCCCC----
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR-DGRTGL---- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-d~~~~~---- 85 (216)
.+++|++||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++. | .+ .++.. +.....
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l----G-----a~--~vi~~~~~~~~~~~~v 258 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKAL----G-----AT--DCLNPRELDKPVQDVI 258 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHT----T-----CS--EEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHh----C-----Cc--EEEccccccchHHHHH
Confidence 467899999999987 88888999886 44 899999999888777542 1 11 12211 100000
Q ss_pred --CCCCCccEEEecCCCCchHHHHHhcCCCC-eEEEEee
Q psy14962 86 --LHQAPFDAIYLSTYVPEIPYSILLQLKPG-GRLVCGV 121 (216)
Q Consensus 86 --~~~~~~D~i~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 121 (216)
...+.+|+|+-.......+....+.|+++ |++++.-
T Consensus 259 ~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 259 TELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEEC
Confidence 01136999998887767778899999999 9998753
No 326
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.16 E-value=0.0022 Score=52.04 Aligned_cols=97 Identities=18% Similarity=0.189 Sum_probs=68.6
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe-ccCCCCC-----
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC-RDGRTGL----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~~~----- 85 (216)
.+++|++||-+|+|. |..+..+++..+. ..|+++|.+++.++.+++. | .+ .++. .+.....
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga-~~Vi~~~~~~~~~~~~~~l----G-----a~--~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAKEF----G-----AT--ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHH----T-----CS--EEECGGGCSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHc----C-----Cc--eEeccccccccHHHHHH
Confidence 467899999999987 8888899988642 2899999999988877643 2 11 1221 1100000
Q ss_pred -CCCCCccEEEecCCCCchHHHHHhcCCCC-eEEEEee
Q psy14962 86 -LHQAPFDAIYLSTYVPEIPYSILLQLKPG-GRLVCGV 121 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 121 (216)
...+.+|+|+........+....+.|+++ |+++..-
T Consensus 255 ~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 255 EMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred HHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEe
Confidence 01236999998887767778899999999 9998753
No 327
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.15 E-value=0.0035 Score=50.24 Aligned_cols=98 Identities=17% Similarity=0.053 Sum_probs=69.4
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC------CC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT------GL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~------~~ 85 (216)
.+.+|++||-.|+|. |.++..+++..+. ..++++|.+++.++.+++.- .. .++...-.. ..
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~-~~vi~~~~~~~k~~~a~~lG---------a~--~~i~~~~~~~~~~~~~~ 224 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGA-KSVTAIDISSEKLALAKSFG---------AM--QTFNSSEMSAPQMQSVL 224 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTT---------CS--EEEETTTSCHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCC-cEEEEEechHHHHHHHHHcC---------Ce--EEEeCCCCCHHHHHHhh
Confidence 467899999999988 7788888888652 36789999999888776531 11 222211110 01
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
.....+|+|+........+....++|+++|++++.-.
T Consensus 225 ~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 225 RELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp GGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCC
T ss_pred cccCCcccccccccccchhhhhhheecCCeEEEEEec
Confidence 1235689999888888888889999999999987543
No 328
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.15 E-value=0.002 Score=53.20 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=49.6
Q ss_pred CCCCCeEEEEcCCCchHHHHHH-HHhCCCcEEEEEeCCHHHHHHHHHHHHH--hCCCCCCC-CCeEEEeccC
Q psy14962 14 IQEGAKVLDIGSGSGFMSCVFA-ELVGKTGRVFGVEHMREQCEDAWETVMR--IRPDLLND-GRLHLRCRDG 81 (216)
Q Consensus 14 ~~~~~~vldiG~G~G~~~~~l~-~~~~~~~~v~~~D~~~~~~~~a~~~~~~--~~~~~~~~-~~~~~~~~d~ 81 (216)
+.++..|+|+||+.|..+..++ +..++.++|+++|++|...+..++++.. ++. . .++.++...+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~----~~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTN----FASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTST----TGGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccC----CCCCEEEEEeEE
Confidence 4788999999999999999988 4543336999999999999999998876 211 2 4666665543
No 329
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.11 E-value=0.002 Score=52.41 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=68.1
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec-cCCCCC----
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR-DGRTGL---- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-d~~~~~---- 85 (216)
.+++|++||.+|+|. |..+..+++.. ++ +|+++|.+++.++.+++. | .+ .++.. +.....
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~l----G-----a~--~vi~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVF----G-----AT--DFVNPNDHSEPISQVL 255 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHT----T-----CC--EEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHh----C-----Cc--eEEeccccchhHHHHH
Confidence 467899999999987 88888889885 44 899999999988877642 1 11 12211 100000
Q ss_pred --CCCCCccEEEecCCCCchHHHHHhcCCCC-eEEEEee
Q psy14962 86 --LHQAPFDAIYLSTYVPEIPYSILLQLKPG-GRLVCGV 121 (216)
Q Consensus 86 --~~~~~~D~i~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 121 (216)
...+.+|+|+........+....+.|+++ |+++..-
T Consensus 256 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 256 SKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEc
Confidence 01136999998887767778899999999 9988753
No 330
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.11 E-value=0.0027 Score=52.20 Aligned_cols=97 Identities=15% Similarity=0.073 Sum_probs=65.9
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC------C
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT------G 84 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~------~ 84 (216)
.+++|++||-+|+|. |..+..+++.. ++ .|+++|.+++.++.+++.-. + .++..+-.. .
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~lGa---------~--~vi~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA--GASKVILSEPSEVRRNLAKELGA---------D--HVIDPTKENFVEAVLD 276 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHTC---------S--EEECTTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcCC---------C--EEEcCCCCCHHHHHHH
Confidence 468899999999987 88889999886 44 89999999998888865411 1 122111110 0
Q ss_pred CCCCCCccEEEecCCCC-chHHHHHhcC----CCCeEEEEeec
Q psy14962 85 LLHQAPFDAIYLSTYVP-EIPYSILLQL----KPGGRLVCGVG 122 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~-~~~~~~~~~L----~~gG~lv~~~~ 122 (216)
......+|+|+-..+.. .....+.+.| +++|++++.-.
T Consensus 277 ~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 277 YTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp HTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred HhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 11234699999877766 2445555555 99999988543
No 331
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.04 E-value=0.002 Score=51.65 Aligned_cols=94 Identities=19% Similarity=0.115 Sum_probs=67.6
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-C---
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-H--- 87 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~--- 87 (216)
.+++|++||.+|+|. |..+..+++..+ ++|++++.+++.++.+++. + .+ .++ |...... .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~--~~~--d~~~~~~~~~~~ 225 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAKEL----G-----AD--LVV--NPLKEDAAKFMK 225 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHT----T-----CS--EEE--CTTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHC----C-----CC--EEe--cCCCccHHHHHH
Confidence 468899999999976 888888888864 5999999999888777542 2 11 111 2211100 0
Q ss_pred --CCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 88 --QAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 88 --~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.+.+|+|+...+.........+.|+++|+++..-
T Consensus 226 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 226 EKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEec
Confidence 0469999988877677788899999999988753
No 332
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.03 E-value=0.0027 Score=51.62 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=67.9
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc-CCCCC----
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD-GRTGL---- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d-~~~~~---- 85 (216)
.+++|++||.+|+|. |..+..+++.. ++ +|+++|.+++.++.+++. | .+ .++..+ .....
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~l----G-----a~--~vi~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEV----G-----AT--ECVNPQDYKKPIQEVL 254 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHT----T-----CS--EEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHh----C-----Cc--eEecccccchhHHHHH
Confidence 467899999999987 88888888885 44 899999999888777542 1 11 122111 00000
Q ss_pred --CCCCCccEEEecCCCCchHHHHHhcCCCC-eEEEEee
Q psy14962 86 --LHQAPFDAIYLSTYVPEIPYSILLQLKPG-GRLVCGV 121 (216)
Q Consensus 86 --~~~~~~D~i~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 121 (216)
...+.+|+|+........+....+.|+++ |+++..-
T Consensus 255 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 255 TEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECS
T ss_pred HHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEec
Confidence 01236999998887767778889999999 9988753
No 333
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.01 E-value=0.0022 Score=51.60 Aligned_cols=95 Identities=19% Similarity=0.120 Sum_probs=66.8
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC------C
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT------G 84 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~------~ 84 (216)
.+ +|++||-+|+|. |..+..+++.. ++ +|+++|.+++.++.+++. + .+ .++..+-.. .
T Consensus 165 ~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~----G-----a~--~~~~~~~~~~~~~v~~ 230 (348)
T 2d8a_A 165 PI-SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKV----G-----AD--YVINPFEEDVVKEVMD 230 (348)
T ss_dssp CC-TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHH----T-----CS--EEECTTTSCHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh----C-----CC--EEECCCCcCHHHHHHH
Confidence 45 899999999976 88888888875 45 899999999888777643 1 11 122111100 0
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
......+|+|+...+.........+.|+++|+++..-
T Consensus 231 ~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 231 ITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEc
Confidence 0112369999998887677788899999999988753
No 334
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.98 E-value=0.0021 Score=51.43 Aligned_cols=95 Identities=19% Similarity=0.124 Sum_probs=65.7
Q ss_pred cCCCCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC------C
Q psy14962 13 KIQEGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT------G 84 (216)
Q Consensus 13 ~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~------~ 84 (216)
.+++|++||-.| +|. |..+..+++.. +++|++++.+++.++.+++. + .+ .++..+-.. .
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g-----a~--~~~~~~~~~~~~~~~~ 211 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKEY----G-----AE--YLINASKEDILRQVLK 211 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T-----CS--EEEETTTSCHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C-----Cc--EEEeCCCchHHHHHHH
Confidence 468899999999 444 88888888885 45999999999888776542 1 11 122211110 0
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
......+|+|+.+.+. ..+....++|+++|+++..-
T Consensus 212 ~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 212 FTNGKGVDASFDSVGK-DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp HTTTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECC
T ss_pred HhCCCCceEEEECCCh-HHHHHHHHHhccCCEEEEEc
Confidence 0113469999987775 56788889999999998853
No 335
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.95 E-value=0.00079 Score=54.46 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=66.3
Q ss_pred cCC-CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCC
Q psy14962 13 KIQ-EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQA 89 (216)
Q Consensus 13 ~~~-~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~ 89 (216)
.+. +|++||-+|+|. |..+..+++..+ ++|++++.+++.++.+++. .| .+.+ +..+-.... ...+
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~~---lG-----a~~v--i~~~~~~~~~~~~~ 243 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQD---LG-----ADDY--VIGSDQAKMSELAD 243 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHTT---SC-----CSCE--EETTCHHHHHHSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHH---cC-----Ccee--eccccHHHHHHhcC
Confidence 356 899999999987 888888998875 4999999998877666522 11 1221 211100000 0013
Q ss_pred CccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 90 PFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 90 ~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.+|+|+...+....+....+.|+++|+++..-
T Consensus 244 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 244 SLDYVIDTVPVHHALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp TEEEEEECCCSCCCSHHHHTTEEEEEEEEECS
T ss_pred CCCEEEECCCChHHHHHHHHHhccCCEEEEeC
Confidence 69999988777666778889999999998753
No 336
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.92 E-value=0.0016 Score=52.59 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=65.1
Q ss_pred CCCC------CeEEEEcCCC-chHH-HHHH-HHhCCCcE-EEEEeCCHH---HHHHHHHHHHHhCCCCCCCCCeEEEecc
Q psy14962 14 IQEG------AKVLDIGSGS-GFMS-CVFA-ELVGKTGR-VFGVEHMRE---QCEDAWETVMRIRPDLLNDGRLHLRCRD 80 (216)
Q Consensus 14 ~~~~------~~vldiG~G~-G~~~-~~l~-~~~~~~~~-v~~~D~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~d 80 (216)
+++| ++||-+|+|. |..+ ..++ +..+ ++ |++++.+++ .++.+++. | .+.+ |
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~G--a~~Vi~~~~~~~~~~~~~~~~~l----G--------a~~v--~ 227 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKG--YENLYCLGRRDRPDPTIDIIEEL----D--------ATYV--D 227 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTC--CCEEEEEECCCSSCHHHHHHHHT----T--------CEEE--E
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcC--CcEEEEEeCCcccHHHHHHHHHc----C--------Cccc--C
Confidence 5688 9999999976 8888 8888 7653 45 999999887 77776542 1 2222 2
Q ss_pred CCCC-CCC----CCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 81 GRTG-LLH----QAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 81 ~~~~-~~~----~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.... ... .+.+|+|+-.......+....+.|+++|+++..-
T Consensus 228 ~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 228 SRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp TTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECC
T ss_pred CCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEe
Confidence 2111 000 1369999988777667788899999999998753
No 337
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.92 E-value=0.0023 Score=47.05 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=62.2
Q ss_pred cCCCCCeEEEEcC--CCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-----
Q psy14962 13 KIQEGAKVLDIGS--GSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----- 85 (216)
.+.+|++||..|+ |.|.....+++..+ ++|+++|.+++..+.+++ .+ .. . +. |.....
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~----~g-----~~-~-~~--d~~~~~~~~~~ 99 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSR----LG-----VE-Y-VG--DSRSVDFADEI 99 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHT----TC-----CS-E-EE--ETTCSTHHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH----cC-----CC-E-Ee--eCCcHHHHHHH
Confidence 4678999999995 33777777777654 599999999887765543 12 11 1 11 221110
Q ss_pred ---CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 ---LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ---~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+++.+.. ........+.|+++|+++..-
T Consensus 100 ~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 100 LELTDGYGVDVVLNSLA-GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HHHTTTCCEEEEEECCC-THHHHHHHHTEEEEEEEEECS
T ss_pred HHHhCCCCCeEEEECCc-hHHHHHHHHHhccCCEEEEEc
Confidence 11236999998765 456688889999999998753
No 338
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.89 E-value=0.0022 Score=51.14 Aligned_cols=55 Identities=20% Similarity=0.232 Sum_probs=43.9
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCH---HHHHHHHHHHHH
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMR---EQCEDAWETVMR 63 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~~~a~~~~~~ 63 (216)
+..++... -.+|+.|||..||+|..+.+..+. +.+.+|+|+++ ...+.+++++..
T Consensus 232 ~~~~i~~~---~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 232 IERLVRAL---SHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHH---SCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHh---CCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHH
Confidence 44555544 368999999999999999887776 45999999999 999999888765
No 339
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.85 E-value=0.0019 Score=51.85 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=65.3
Q ss_pred cCCCCCeEEEEcCCC--chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC--C---CC
Q psy14962 13 KIQEGAKVLDIGSGS--GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR--T---GL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~--G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~--~---~~ 85 (216)
.+++|++||-.|+|. |..+..+++..+ ++|++++.+++.++.+++. + ....+...+.. . ..
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~l----g------a~~~~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLRL----G------AAYVIDTSTAPLYETVMEL 208 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHHH----T------CSEEEETTTSCHHHHHHHH
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhC----C------CcEEEeCCcccHHHHHHHH
Confidence 468899999999974 888888888864 5999999999888877653 2 11111111110 0 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+|+.+........ ..+.|+++|+++..-
T Consensus 209 ~~~~g~Dvvid~~g~~~~~~-~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIGGPDGNE-LAFSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSCHHHHHH-HHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCCChhHHH-HHHHhcCCCEEEEEe
Confidence 12246999998777665544 448999999998864
No 340
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.85 E-value=0.0021 Score=51.39 Aligned_cols=55 Identities=18% Similarity=0.123 Sum_probs=44.4
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHH
Q psy14962 3 QARIIELLEPKIQEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMR 63 (216)
Q Consensus 3 ~~~~~~~l~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~ 63 (216)
+..++... ..+|+.|||..||+|..+.+..+. +.+.+|+|+++...+.+++++..
T Consensus 242 ~~~~i~~~---~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 242 PEFFIRML---TEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHHH---CCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHh
Confidence 44455444 378999999999999998877665 45999999999999999888654
No 341
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.84 E-value=0.00045 Score=68.74 Aligned_cols=100 Identities=14% Similarity=0.089 Sum_probs=55.7
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCC----CcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC-CCCCC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGK----TGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG-LLHQA 89 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~ 89 (216)
.+..+|||+|+|+|..+..+.+.++. ..+++..|+|+...+.+++++... .+.....|.... .....
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--------di~~~~~d~~~~~~~~~~ 1310 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--------HVTQGQWDPANPAPGSLG 1310 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH--------TEEEECCCSSCCCC----
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc--------ccccccccccccccCCCC
Confidence 35679999999999887776666542 136788899998888887776552 222222232211 11345
Q ss_pred CccEEEecCCCCc------hHHHHHhcCCCCeEEEEeec
Q psy14962 90 PFDAIYLSTYVPE------IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 90 ~~D~i~~~~~~~~------~~~~~~~~L~~gG~lv~~~~ 122 (216)
.||+|++...++. .+.+++++|||||++++...
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC--------------------CCEEEEEEC
T ss_pred ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 6999999887653 56788999999999988653
No 342
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.83 E-value=0.0044 Score=50.18 Aligned_cols=92 Identities=21% Similarity=0.110 Sum_probs=63.8
Q ss_pred CCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCH---HHHHHHHHHHHHhCCCCCCCCCeEEEec-cCCCCCC-CCCC
Q psy14962 17 GAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMR---EQCEDAWETVMRIRPDLLNDGRLHLRCR-DGRTGLL-HQAP 90 (216)
Q Consensus 17 ~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~-~~~~ 90 (216)
|++||-+|+|. |..+..+++..+ ++|++++.++ +.++.+++. + .+.+.. +...... ..+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~~~~----g--------a~~v~~~~~~~~~~~~~~~ 246 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPTEVEQTVIEET----K--------TNYYNSSNGYDKLKDSVGK 246 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCCHHHHHHHHHH----T--------CEEEECTTCSHHHHHHHCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccchHHHHHHHHh----C--------CceechHHHHHHHHHhCCC
Confidence 99999999965 777888888764 4999999987 766666542 2 222211 1110000 0146
Q ss_pred ccEEEecCCCCchH-HHHHhcCCCCeEEEEeec
Q psy14962 91 FDAIYLSTYVPEIP-YSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 91 ~D~i~~~~~~~~~~-~~~~~~L~~gG~lv~~~~ 122 (216)
+|+|+...+..... ....+.|+++|+++..-.
T Consensus 247 ~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 247 FDVIIDATGADVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEEEEECCCCCTHHHHHHGGGEEEEEEEEECSC
T ss_pred CCEEEECCCChHHHHHHHHHHHhcCCEEEEEec
Confidence 99999988887777 889999999999887543
No 343
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.82 E-value=0.0057 Score=51.12 Aligned_cols=95 Identities=17% Similarity=0.151 Sum_probs=66.5
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC------
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG------ 84 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~------ 84 (216)
.+++|++||-+|+ |. |..+..+++.. ++++++++.+++.++.+++. | .. .++...-...
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~l----G-----a~--~vi~~~~~d~~~~~~~ 291 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRAM----G-----AE--AIIDRNAEGYRFWKDE 291 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T-----CC--EEEETTTTTCCSEEET
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHhh----C-----Cc--EEEecCcCcccccccc
Confidence 4688999999998 66 88999999886 45999999899888877653 2 11 1121110000
Q ss_pred -----------------CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 -----------------LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 -----------------~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
......+|+|+-..+. ..+....++|+++|+++..-
T Consensus 292 ~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 292 NTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp TEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEEEEEEESC
T ss_pred cccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCCcEEEEEe
Confidence 0112479999987765 56788889999999998753
No 344
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.80 E-value=0.0065 Score=48.72 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=66.8
Q ss_pred cCCCCCeEEEEcC--CCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-----
Q psy14962 13 KIQEGAKVLDIGS--GSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----- 85 (216)
.++++.+||..|+ |.|..+..+++.. +++|++++.+++.++.+++. + ... ++ |.....
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~----g-----a~~--~~--d~~~~~~~~~~ 227 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKAL----G-----ADE--TV--NYTHPDWPKEV 227 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T-----CSE--EE--ETTSTTHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhc----C-----CCE--EE--cCCcccHHHHH
Confidence 4678999999998 4488888888875 45999999999888777542 2 111 22 221110
Q ss_pred ---CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 ---LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ---~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+|+.... ........+.|+++|+++..-
T Consensus 228 ~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 228 RRLTGGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp HHHTTTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESS
T ss_pred HHHhCCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEe
Confidence 11246999999888 677788999999999988754
No 345
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.78 E-value=0.0037 Score=49.67 Aligned_cols=93 Identities=17% Similarity=0.088 Sum_probs=62.3
Q ss_pred cCCCCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC-CCCCCC
Q psy14962 13 KIQEGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT-GLLHQA 89 (216)
Q Consensus 13 ~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~ 89 (216)
.+++|++||-.| +|. |..+..+++..+ ++|++++ +++.++.+++. | .+ .++..+-.. ....-.
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~-~~~~~~~~~~l----G-----a~--~~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA-SKRNHAFLKAL----G-----AE--QCINYHEEDFLLAIST 214 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE-CHHHHHHHHHH----T-----CS--EEEETTTSCHHHHCCS
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe-ccchHHHHHHc----C-----CC--EEEeCCCcchhhhhcc
Confidence 478999999997 776 999999999864 5899987 45445555442 2 12 122211111 001114
Q ss_pred CccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 90 PFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 90 ~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
.+|+|+....-... ....++|+++|+++..
T Consensus 215 g~D~v~d~~g~~~~-~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 215 PVDAVIDLVGGDVG-IQSIDCLKETGCIVSV 244 (321)
T ss_dssp CEEEEEESSCHHHH-HHHGGGEEEEEEEEEC
T ss_pred CCCEEEECCCcHHH-HHHHHhccCCCEEEEe
Confidence 69999987776555 7888999999999875
No 346
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.77 E-value=0.0058 Score=48.59 Aligned_cols=96 Identities=17% Similarity=0.239 Sum_probs=65.3
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC--C---CC
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR--T---GL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~--~---~~ 85 (216)
.++++++||..|+ |. |.....+++..+ ++|++++.+++.++.+++. + ....+...+.. . ..
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~~----g------~~~~~~~~~~~~~~~~~~~ 204 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTAQKAQSALKA----G------AWQVINYREEDLVERLKEI 204 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHHH----T------CSEEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHc----C------CCEEEECCCccHHHHHHHH
Confidence 4678999999994 33 778888887764 5999999999887777652 2 11111111110 0 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+++.+.. ........+.|+++|+++..-
T Consensus 205 ~~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 205 TGGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECC
T ss_pred hCCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEe
Confidence 11236999998887 677788999999999988754
No 347
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.77 E-value=0.0042 Score=49.94 Aligned_cols=93 Identities=19% Similarity=0.179 Sum_probs=65.4
Q ss_pred CCCeEEEE-cCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc--CCCCC--CCCC
Q psy14962 16 EGAKVLDI-GSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD--GRTGL--LHQA 89 (216)
Q Consensus 16 ~~~~vldi-G~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d--~~~~~--~~~~ 89 (216)
+|++||-. |+|. |..+..+++..+ ++|++++.+++.++.+++. | .+ .++..+ ..... ....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~--~vi~~~~~~~~~~~~~~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKKM----G-----AD--IVLNHKESLLNQFKTQGIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHHH----T-----CS--EEECTTSCHHHHHHHHTCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhc----C-----Cc--EEEECCccHHHHHHHhCCC
Confidence 89999999 5666 888899998864 5999999999888877763 2 11 112111 00000 1234
Q ss_pred CccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 90 PFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 90 ~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.+|+|+........+..+.++|+++|+++...
T Consensus 217 g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 217 LVDYVFCTFNTDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp CEEEEEESSCHHHHHHHHHHHEEEEEEEEESS
T ss_pred CccEEEECCCchHHHHHHHHHhccCCEEEEEC
Confidence 69999988776667788889999999997653
No 348
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.74 E-value=0.0042 Score=49.88 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=64.7
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc--CCC---CC
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD--GRT---GL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d--~~~---~~ 85 (216)
.+++|++||-.|+ |. |..+..+++.. +++|++++.+++.++.+++. + .. .++..+ ... ..
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g-----a~--~v~~~~~~~~~~v~~~ 222 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSV----G-----AD--IVLPLEEGWAKAVREA 222 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH----T-----CS--EEEESSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----C-----Cc--EEecCchhHHHHHHHH
Confidence 4678999999998 44 88888899886 45999999999888777653 2 11 122222 100 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+|+...... .+....+.|+++|+++..-
T Consensus 223 ~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 223 TGGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC-
T ss_pred hCCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEE
Confidence 1123699999877754 5677889999999998753
No 349
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.74 E-value=0.0016 Score=52.84 Aligned_cols=96 Identities=17% Similarity=0.233 Sum_probs=65.0
Q ss_pred CC-CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-CCCCC
Q psy14962 14 IQ-EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-LHQAP 90 (216)
Q Consensus 14 ~~-~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~ 90 (216)
+. +|++||-+|+|. |..+..+++..+ ++|++++.+++.++.+.+.+ | .+ .++..+-.... ...+.
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~l---G-----a~--~v~~~~~~~~~~~~~~~ 251 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKKEEALKNF---G-----AD--SFLVSRDQEQMQAAAGT 251 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGHHHHHHTS---C-----CS--EEEETTCHHHHHHTTTC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhc---C-----Cc--eEEeccCHHHHHHhhCC
Confidence 56 899999999877 888888888864 59999999988776655321 1 12 12211100000 00136
Q ss_pred ccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 91 FDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 91 ~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
+|+|+...+.........+.|+++|+++..-
T Consensus 252 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 252 LDGIIDTVSAVHPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEEECCSSCCCSHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCcHHHHHHHHHHHhcCCEEEEEc
Confidence 9999988777666678889999999988753
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.74 E-value=0.0032 Score=50.62 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=66.5
Q ss_pred cCCCCCeEEEEcCCC--chHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC-----C
Q psy14962 13 KIQEGAKVLDIGSGS--GFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT-----G 84 (216)
Q Consensus 13 ~~~~~~~vldiG~G~--G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~-----~ 84 (216)
.+.++++||..|+|. |..+..+++.. + ++|+++|.+++.++.+++. + ....+...+... .
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G--a~Vi~~~~~~~~~~~~~~~----g------~~~~~~~~~~~~~~~~~~ 234 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREEAVEAAKRA----G------ADYVINASMQDPLAEIRR 234 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHHHHHHHHHH----T------CSEEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHHh----C------CCEEecCCCccHHHHHHH
Confidence 467899999999983 77778888876 4 4899999999888777542 2 111111111100 0
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
....+.+|+++........+....+.|+++|+++..-
T Consensus 235 ~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 235 ITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECC
T ss_pred HhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEEC
Confidence 0111479999988877667778889999999988753
No 351
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.69 E-value=0.00098 Score=53.05 Aligned_cols=91 Identities=15% Similarity=0.103 Sum_probs=62.8
Q ss_pred eEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC-CCCCCCCccEEE
Q psy14962 19 KVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT-GLLHQAPFDAIY 95 (216)
Q Consensus 19 ~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~i~ 95 (216)
+||-.|+ |. |..+..+++..+ ++|++++.+++.++.+++. | .+.+ +...+... .....+.+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~~v-i~~~~~~~~~~~~~~~~d~v~ 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKSL----G-----ANRI-LSRDEFAESRPLEKQLWAGAI 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHHH----T-----CSEE-EEGGGSSCCCSSCCCCEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHhc----C-----CCEE-EecCCHHHHHhhcCCCccEEE
Confidence 4999998 55 899999999864 5999999999988888653 2 1111 22222111 111235799998
Q ss_pred ecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 96 LSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 96 ~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
-...-. .+....++|+++|+++..-.
T Consensus 217 d~~g~~-~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 217 DTVGDK-VLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ESSCHH-HHHHHHHTEEEEEEEEECCC
T ss_pred ECCCcH-HHHHHHHHHhcCCEEEEEec
Confidence 766544 67888899999999987643
No 352
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.61 E-value=0.00079 Score=54.81 Aligned_cols=94 Identities=21% Similarity=0.150 Sum_probs=61.3
Q ss_pred CCCCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC---CCCCCC
Q psy14962 14 IQEGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR---TGLLHQ 88 (216)
Q Consensus 14 ~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~ 88 (216)
+++|++||-.| +|. |..+..+++..+ ++|++++ +++.++.+++ .| .+ .++..+-. ......
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~-~~~~~~~~~~----lG-----a~--~v~~~~~~~~~~~~~~~ 246 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC-SQDASELVRK----LG-----AD--DVIDYKSGSVEEQLKSL 246 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHH----TT-----CS--EEEETTSSCHHHHHHTS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe-ChHHHHHHHH----cC-----CC--EEEECCchHHHHHHhhc
Confidence 67899999999 566 888899998864 5899998 6665555533 22 12 12211100 001112
Q ss_pred CCccEEEecCCCC-chHHHHHhcCCCCeEEEEee
Q psy14962 89 APFDAIYLSTYVP-EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 89 ~~~D~i~~~~~~~-~~~~~~~~~L~~gG~lv~~~ 121 (216)
..+|+|+...+.. .......+.|+++|+++..-
T Consensus 247 ~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 247 KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeC
Confidence 4699999887766 34466778999999998753
No 353
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.59 E-value=0.00045 Score=54.52 Aligned_cols=89 Identities=21% Similarity=0.169 Sum_probs=63.1
Q ss_pred CCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec----cCCCCCCC
Q psy14962 14 IQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR----DGRTGLLH 87 (216)
Q Consensus 14 ~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~----d~~~~~~~ 87 (216)
+++|++||-.|+ |. |..+..+++..+ ++|++++.+++.++.+++. + ... ++.. +.....
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~----g-----a~~--~~~~~~~~~~~~~~-- 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPLAL----G-----AEE--AATYAEVPERAKAW-- 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHHHT----T-----CSE--EEEGGGHHHHHHHT--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhc----C-----CCE--EEECCcchhHHHHh--
Confidence 678999999998 44 888888888864 5999999998887776542 2 121 2211 111111
Q ss_pred CCCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 88 QAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
..+|+|+. .+. .......+.|+++|+++..
T Consensus 188 -~~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 188 -GGLDLVLE-VRG-KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -TSEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC
T ss_pred -cCceEEEE-CCH-HHHHHHHHhhccCCEEEEE
Confidence 46999998 665 5678889999999998874
No 354
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.54 E-value=0.0097 Score=47.94 Aligned_cols=95 Identities=13% Similarity=-0.051 Sum_probs=64.1
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC------C
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT------G 84 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~------~ 84 (216)
.+++|++||..|+ |. |..+..+++.. +++|++++.+++.++.+++. + .. . ++..+-.. .
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g-----~~-~-~~~~~~~~~~~~~~~ 225 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKL----G-----AA-A-GFNYKKEDFSEATLK 225 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH----T-----CS-E-EEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----C-----Cc-E-EEecCChHHHHHHHH
Confidence 4678999999984 33 77888888775 45999999999888777432 2 11 1 11111100 0
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
......+|+++.+.+.. ......++|+++|+++..-
T Consensus 226 ~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 226 FTKGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp HTTTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECC
T ss_pred HhcCCCceEEEECCCch-HHHHHHHhccCCCEEEEEe
Confidence 01124699999887765 5677789999999998754
No 355
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.50 E-value=0.0013 Score=52.91 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=65.4
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC---CCC-
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT---GLL- 86 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~- 86 (216)
.+ +|++||.+|+|. |..+..+++.. ++ +|++++.+++.++.+++. . + .++..+-.. ...
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a---------~--~v~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A---------D--RLVNPLEEDLLEVVRR 226 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C---------S--EEECTTTSCHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H---------H--hccCcCccCHHHHHHH
Confidence 46 899999999976 88888888875 45 899999998877666542 1 1 111111000 000
Q ss_pred -CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 87 -HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 -~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
....+|+|+...+.........+.|+++|+++..-
T Consensus 227 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 227 VTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECC
T ss_pred hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEe
Confidence 02469999988877667788899999999988753
No 356
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.47 E-value=0.01 Score=48.03 Aligned_cols=95 Identities=19% Similarity=0.098 Sum_probs=65.2
Q ss_pred cCCCCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC---CC--
Q psy14962 13 KIQEGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT---GL-- 85 (216)
Q Consensus 13 ~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~---~~-- 85 (216)
.+++|++||-.| +|. |..+..+++.. +++|++++.+++.++.+++. | .. .++..+-.. ..
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~----G-----a~--~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSL----G-----CD--RPINYKTEPVGTVLKQ 226 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T-----CS--EEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHc----C-----Cc--EEEecCChhHHHHHHH
Confidence 468899999999 454 88889999886 45999999998887777642 2 11 122111110 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+|+..... .....+.+.|+++|+++..-
T Consensus 227 ~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 227 EYPEGVDVVYESVGG-AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp HCTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECC
T ss_pred hcCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEe
Confidence 012469999987765 56678889999999988753
No 357
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.43 E-value=0.0072 Score=48.24 Aligned_cols=96 Identities=22% Similarity=0.261 Sum_probs=64.3
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC--CCC--C
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR--TGL--L 86 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~--~~~--~ 86 (216)
.+++|++||-.|+ |. |..+..+++.. +++|++++.+++.++.+.+. .+ .. ..+...+.. ... .
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~---~g-----~~-~~~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEE---LG-----FD-GAIDYKNEDLAAGLKRE 214 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT---TC-----CS-EEEETTTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHH---cC-----CC-EEEECCCHHHHHHHHHh
Confidence 4789999999998 43 88888888875 45999999999877766322 11 11 111111110 000 0
Q ss_pred CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 87 HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
..+.+|+++.+... ..+....+.|+++|+++..
T Consensus 215 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 215 CPKGIDVFFDNVGG-EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp CTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC
T ss_pred cCCCceEEEECCCc-chHHHHHHHHhhCCEEEEE
Confidence 12469999987764 4668888999999999875
No 358
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.43 E-value=0.002 Score=51.33 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=64.9
Q ss_pred cCCCCC-eEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC-CC--CCC
Q psy14962 13 KIQEGA-KVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG-RT--GLL 86 (216)
Q Consensus 13 ~~~~~~-~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~--~~~ 86 (216)
.++++. +||-.|+ |. |..+..+++..+ ++|++++.+++.++.+++. | .+.+ +...+. .. ...
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~l----G-----a~~v-~~~~~~~~~~~~~~ 213 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNREAADYLKQL----G-----ASEV-ISREDVYDGTLKAL 213 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSSTHHHHHHH----T-----CSEE-EEHHHHCSSCCCSS
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHc----C-----CcEE-EECCCchHHHHHHh
Confidence 366775 8999997 55 888889998875 4899999988877777642 2 1111 111111 11 111
Q ss_pred CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 87 HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
..+.+|+|+....- ..+....+.++++|+++..-
T Consensus 214 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 214 SKQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CCCCEEEEEESCCT-HHHHHHHTTEEEEEEEEECC
T ss_pred hcCCccEEEECCcH-HHHHHHHHhhcCCCEEEEEe
Confidence 23469999987765 46788889999999998753
No 359
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.41 E-value=0.011 Score=47.66 Aligned_cols=96 Identities=16% Similarity=0.053 Sum_probs=65.4
Q ss_pred cCCCCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC---C--
Q psy14962 13 KIQEGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG---L-- 85 (216)
Q Consensus 13 ~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~---~-- 85 (216)
.+++|++||-.| +|. |..+..+++.. +++|++++.+++.++.+++. + .. .++..+-... .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~--~~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACERL----G-----AK--RGINYRSEDFAAVIKA 230 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T-----CS--EEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----C-----CC--EEEeCCchHHHHHHHH
Confidence 467899999995 454 88888888886 45999999999988877653 2 11 1221111100 0
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
.....+|+|+...+.. ......+.|+++|+++..-.
T Consensus 231 ~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 231 ETGQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HHSSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEe
Confidence 0134699999877654 56778899999999887643
No 360
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.39 E-value=0.0065 Score=48.34 Aligned_cols=95 Identities=15% Similarity=0.103 Sum_probs=63.2
Q ss_pred cCCCCC-eEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC-CC--CCC
Q psy14962 13 KIQEGA-KVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG-RT--GLL 86 (216)
Q Consensus 13 ~~~~~~-~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~--~~~ 86 (216)
.++++. +||-.|+ |. |..+..+++..+ ++|++++.+++.++.+++. | .+.+ +...+. .. ...
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~~~~~~~~l----G-----a~~~-i~~~~~~~~~~~~~ 212 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAAEHDYLRVL----G-----AKEV-LAREDVMAERIRPL 212 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHHHT----T-----CSEE-EECC---------C
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHc----C-----CcEE-EecCCcHHHHHHHh
Confidence 366775 8999997 55 888899998864 5899999988877777542 2 1111 111111 00 011
Q ss_pred CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 87 HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
..+.+|+|+....-. .+....+.++++|+++..
T Consensus 213 ~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 213 DKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CSCCEEEEEECSTTT-THHHHHHTEEEEEEEEEC
T ss_pred cCCcccEEEECCcHH-HHHHHHHhhccCCEEEEE
Confidence 234699999877653 667888999999999875
No 361
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.38 E-value=0.01 Score=47.45 Aligned_cols=93 Identities=15% Similarity=0.167 Sum_probs=64.2
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC--CC---
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT--GL--- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~--~~--- 85 (216)
.+++|++||..|+ |. |..+..+++.. +++|++++.+++.++.+++.+ + .. .++ |... ..
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~---g-----~~--~~~--d~~~~~~~~~~ 217 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKF---G-----FD--DAF--NYKEESDLTAA 217 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTS---C-----CS--EEE--ETTSCSCSHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---C-----Cc--eEE--ecCCHHHHHHH
Confidence 4678999999997 43 88888888875 459999999988777665321 1 11 112 2111 11
Q ss_pred ---CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 86 ---LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 86 ---~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
...+.+|+++.+... ..+....+.|+++|++++.
T Consensus 218 ~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 218 LKRCFPNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHHHCTTCEEEEEESSCH-HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHhCCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEE
Confidence 012469999988765 4678888999999999875
No 362
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.33 E-value=0.0022 Score=51.52 Aligned_cols=93 Identities=20% Similarity=0.199 Sum_probs=63.5
Q ss_pred cCCCCCeEEEEc-CCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC--C---CC
Q psy14962 13 KIQEGAKVLDIG-SGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR--T---GL 85 (216)
Q Consensus 13 ~~~~~~~vldiG-~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~--~---~~ 85 (216)
.+++|++||-+| +|. |..+..+++..+ ++|+++ .+++.++.+++. | ...+..+.. . ..
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~-~~~~~~~~~~~l----G--------a~~i~~~~~~~~~~~~~ 211 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT-ARGSDLEYVRDL----G--------ATPIDASREPEDYAAEH 211 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE-ECHHHHHHHHHH----T--------SEEEETTSCHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE-eCHHHHHHHHHc----C--------CCEeccCCCHHHHHHHH
Confidence 467899999999 455 888899998864 599999 788877766543 2 111221110 0 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+|+....- ..+....++|+++|+++..-
T Consensus 212 ~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 212 TAGQGFDLVYDTLGG-PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HTTSCEEEEEESSCT-HHHHHHHHHEEEEEEEEESC
T ss_pred hcCCCceEEEECCCc-HHHHHHHHHHhcCCeEEEEc
Confidence 122469999987663 56678889999999998753
No 363
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.0064 Score=48.81 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=65.7
Q ss_pred cCCCCCeEEEEcC-C-CchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC--CCC--
Q psy14962 13 KIQEGAKVLDIGS-G-SGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT--GLL-- 86 (216)
Q Consensus 13 ~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~-- 86 (216)
.+++|++||..|+ | .|..+..+++.. +++|++++.+++.++.+++. + .. .++ |... ...
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~~----g-----~~--~~~--d~~~~~~~~~~ 230 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRSI----G-----GE--VFI--DFTKEKDIVGA 230 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHHT----T-----CC--EEE--ETTTCSCHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHHc----C-----Cc--eEE--ecCccHhHHHH
Confidence 4678999999998 3 377888888775 45999999988877666532 2 11 122 2210 100
Q ss_pred ----CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEeec
Q psy14962 87 ----HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 87 ----~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 122 (216)
..+.+|+++.............+.|+++|+++..-.
T Consensus 231 ~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 231 VLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCC
T ss_pred HHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeC
Confidence 012699999988876777888999999999887543
No 364
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.28 E-value=0.014 Score=46.10 Aligned_cols=104 Identities=20% Similarity=0.277 Sum_probs=59.4
Q ss_pred CCeEEEEcCCCchHHHH---HHHHhCCCc--EEEEEeCCH--------HHHHHHHHHHHHhCCCCCCCCC--eEEEeccC
Q psy14962 17 GAKVLDIGSGSGFMSCV---FAELVGKTG--RVFGVEHMR--------EQCEDAWETVMRIRPDLLNDGR--LHLRCRDG 81 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~---l~~~~~~~~--~v~~~D~~~--------~~~~~a~~~~~~~~~~~~~~~~--~~~~~~d~ 81 (216)
.-+|+|+|-|+|.-... .+...++.. +++.+|..+ +......+.+...... ....+ +++..+|+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~-~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPE-YEGERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSE-EECSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcc-ccCCcEEEEEEechH
Confidence 35799999999985433 233445554 456666422 1112222222211100 01123 45677887
Q ss_pred CCCCC--CCCCccEEEecCCCC---------chHHHHHhcCCCCeEEEEee
Q psy14962 82 RTGLL--HQAPFDAIYLSTYVP---------EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 82 ~~~~~--~~~~~D~i~~~~~~~---------~~~~~~~~~L~~gG~lv~~~ 121 (216)
..... ....+|+|+.++-.+ .++..+.++++|||+++-.+
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe
Confidence 53322 234799999976432 26689999999999997644
No 365
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.27 E-value=0.014 Score=47.59 Aligned_cols=71 Identities=20% Similarity=0.015 Sum_probs=52.2
Q ss_pred CeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------CCC
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--------HQA 89 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~ 89 (216)
.+|+|+.||.|.++..+.+.. -..+.++|+++...+..+.+. .+..++++|+..... ...
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~----------~~~~~~~~DI~~~~~~~~~~~~~~~~ 70 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINF----------PRSLHVQEDVSLLNAEIIKGFFKNDM 70 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHC----------TTSEEECCCGGGCCHHHHHHHHCSCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhC----------CCCceEecChhhcCHHHHHhhcccCC
Confidence 479999999999999888772 125679999999877666553 346678888764321 235
Q ss_pred CccEEEecCCC
Q psy14962 90 PFDAIYLSTYV 100 (216)
Q Consensus 90 ~~D~i~~~~~~ 100 (216)
.+|+|+.+.+-
T Consensus 71 ~~D~i~ggpPC 81 (376)
T 3g7u_A 71 PIDGIIGGPPC 81 (376)
T ss_dssp CCCEEEECCCC
T ss_pred CeeEEEecCCC
Confidence 69999988873
No 366
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.27 E-value=0.026 Score=43.45 Aligned_cols=107 Identities=18% Similarity=0.058 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHH---h---CCCcEEEEEe-----CCHH-------------------HHHHHHHHHHHh-
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAEL---V---GKTGRVFGVE-----HMRE-------------------QCEDAWETVMRI- 64 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~---~---~~~~~v~~~D-----~~~~-------------------~~~~a~~~~~~~- 64 (216)
-...|+|+|+-.|..+..++.. + ++..+++++| +.+. ..+..++.+...
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 3459999999999988776543 2 2456999999 3210 111122211110
Q ss_pred CCC--CCCCCCeEEEeccCCCCCC------CCCCccEEEecCCCCc----hHHHHHhcCCCCeEEEEeec
Q psy14962 65 RPD--LLNDGRLHLRCRDGRTGLL------HQAPFDAIYLSTYVPE----IPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 65 ~~~--~~~~~~~~~~~~d~~~~~~------~~~~~D~i~~~~~~~~----~~~~~~~~L~~gG~lv~~~~ 122 (216)
+.. ....+++.++.+++..... +..++|+|+.+..... .++.+...|+|||++++...
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 000 1113789999999864332 2357999999987632 35778899999999999654
No 367
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.25 E-value=0.018 Score=45.88 Aligned_cols=93 Identities=22% Similarity=0.157 Sum_probs=64.9
Q ss_pred cCCCCCeEEEEcC--CCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-----
Q psy14962 13 KIQEGAKVLDIGS--GSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----- 85 (216)
.++++++||..|+ |.|..+..+++.. +++|++++.+++.++.+++. + ... ++ |.....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~----g------~~~-~~--d~~~~~~~~~i 206 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARKL----G------CHH-TI--NYSTQDFAEVV 206 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T------CSE-EE--ETTTSCHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C------CCE-EE--ECCCHHHHHHH
Confidence 4678999999995 4488888888875 45999999999887777542 2 111 11 211110
Q ss_pred ---CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 ---LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ---~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+++.+.+. .......++|+++|+++..-
T Consensus 207 ~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 207 REITGGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp HHHHTTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECC
T ss_pred HHHhCCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEe
Confidence 112369999988776 66688889999999988754
No 368
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.13 E-value=0.0098 Score=49.49 Aligned_cols=96 Identities=15% Similarity=0.074 Sum_probs=65.4
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe--ccCCCC----
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC--RDGRTG---- 84 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~d~~~~---- 84 (216)
.+++|++||-.|+ |. |..+..+++.. ++++++++.+++.++.+++. | ...+ +.. .|....
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~l----G-----a~~~-i~~~~~~~~~~~~~~ 284 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRAL----G-----CDLV-INRAELGITDDIADD 284 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T-----CCCE-EEHHHHTCCTTGGGC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----C-----CCEE-Eeccccccccccccc
Confidence 4788999999998 55 88888888885 45999999999888777542 2 1221 111 111000
Q ss_pred --------------C--CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 --------------L--LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 --------------~--~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
. .....+|+|+..... ..+....+.|+++|+++..-
T Consensus 285 ~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 285 PRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-HHHHHHHHHSCTTCEEEESC
T ss_pred ccccchhhhHHHHHHHHHhCCCceEEEECCCc-hHHHHHHHHHhcCCEEEEEe
Confidence 0 013469999987765 35677888999999998854
No 369
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.10 E-value=0.033 Score=45.15 Aligned_cols=93 Identities=11% Similarity=-0.000 Sum_probs=63.0
Q ss_pred CCCCeEEEEcC-C-CchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC---CC--CC
Q psy14962 15 QEGAKVLDIGS-G-SGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT---GL--LH 87 (216)
Q Consensus 15 ~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~---~~--~~ 87 (216)
.+|.+||-.|+ | .|..+..+++..+ ++|+++. +++.++.+++. | .+ .++...-.. .. ..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~-~~~~~~~~~~l----G-----a~--~vi~~~~~~~~~~v~~~t 228 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATC-SPHNFDLAKSR----G-----AE--EVFDYRAPNLAQTIRTYT 228 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEE-CGGGHHHHHHT----T-----CS--EEEETTSTTHHHHHHHHT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEe-CHHHHHHHHHc----C-----Cc--EEEECCCchHHHHHHHHc
Confidence 78999999999 4 3899999999864 5888885 77776666542 2 11 122211110 00 11
Q ss_pred CCCccEEEecCCCCchHHHHHhcC-CCCeEEEEee
Q psy14962 88 QAPFDAIYLSTYVPEIPYSILLQL-KPGGRLVCGV 121 (216)
Q Consensus 88 ~~~~D~i~~~~~~~~~~~~~~~~L-~~gG~lv~~~ 121 (216)
.+.+|+|+-.......+....+.| +++|+++..-
T Consensus 229 ~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 229 KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESS
T ss_pred cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEe
Confidence 245999998888777778888888 6999998753
No 370
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.05 E-value=0.013 Score=47.22 Aligned_cols=93 Identities=19% Similarity=0.193 Sum_probs=63.1
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-----
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----- 85 (216)
.+++|++||..|+ |. |..+..+++.. +++|++++.+++.++.+++. + .. .++ |.....
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g-----a~--~~~--d~~~~~~~~~~ 231 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQN----G-----AH--EVF--NHREVNYIDKI 231 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T-----CS--EEE--ETTSTTHHHHH
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHc----C-----CC--EEE--eCCCchHHHHH
Confidence 4678999999997 43 77888888875 45999999999887765432 2 11 122 211110
Q ss_pred ---CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 ---LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ---~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+++.+.+.. .+....++|+++|+++..-
T Consensus 232 ~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECC
T ss_pred HHHcCCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEe
Confidence 1123699999876643 4567789999999998754
No 371
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=96.04 E-value=0.0089 Score=48.26 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=63.3
Q ss_pred cCCCCCeEEEEcCCC-chHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC-----CCC
Q psy14962 13 KIQEGAKVLDIGSGS-GFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR-----TGL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~G~-G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-----~~~ 85 (216)
.+++|++||-+|+|. |..+..+++.. + ++|+++|.+++.++.+++. | .+. ++...-. ...
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~~--vi~~~~~~~~~v~~~ 249 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTP--ATVIALDVKEEKLKLAERL----G-----ADH--VVDARRDPVKQVMEL 249 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCC--CEEEEEESSHHHHHHHHHT----T-----CSE--EEETTSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEeCCHHHHHHHHHh----C-----CCE--EEeccchHHHHHHHH
Confidence 478999999999977 88888889887 5 4899999999888777642 1 111 2211100 001
Q ss_pred CCCCCccEEEecCCCCc--hHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPE--IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~--~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+|+-..+... .+....+. ++|+++..-
T Consensus 250 ~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 250 TRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp TTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECC
T ss_pred hCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEe
Confidence 11236999998877664 55555666 899988753
No 372
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.00 E-value=0.017 Score=45.94 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=62.8
Q ss_pred cCCCCCeEEEEcC--CCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC---CC--
Q psy14962 13 KIQEGAKVLDIGS--GSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT---GL-- 85 (216)
Q Consensus 13 ~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~---~~-- 85 (216)
.+.+|++||..|+ |.|..+..+++.. +++|+++|.+++.++.+++. + . ...+...+... ..
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~----g-----~-~~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQI----G-----F-DAAFNYKTVNSLEEALKK 209 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T-----C-SEEEETTSCSCHHHHHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhc----C-----C-cEEEecCCHHHHHHHHHH
Confidence 4678999999998 3377777777775 45999999998887766321 1 1 11111111010 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
...+.+|+++.+.+.. .+....+.|+++|++++.-
T Consensus 210 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 210 ASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECC
T ss_pred HhCCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEe
Confidence 0124699999887753 4677889999999998753
No 373
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.80 E-value=0.0094 Score=47.96 Aligned_cols=72 Identities=21% Similarity=0.114 Sum_probs=51.9
Q ss_pred CeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC---CCCccEE
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH---QAPFDAI 94 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~i 94 (216)
.+|+|+.||.|.++..+......-..|.++|+++.+++..+.+.. +..++.+|+...... ...+|++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~----------~~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP----------HTQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----------TSCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc----------ccccccCCHHHccHhHcCcCCcCEE
Confidence 579999999999999988762101268999999998888777642 344677887643311 1158999
Q ss_pred EecCC
Q psy14962 95 YLSTY 99 (216)
Q Consensus 95 ~~~~~ 99 (216)
+.+.+
T Consensus 73 ~~gpP 77 (343)
T 1g55_A 73 LMSPP 77 (343)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98887
No 374
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.79 E-value=0.027 Score=44.95 Aligned_cols=70 Identities=14% Similarity=0.001 Sum_probs=49.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-CCCCccEEE
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-HQAPFDAIY 95 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~i~ 95 (216)
+.+|+|+.||.|.++..+.+. | -..+.++|+++...+..+.+... . . .+|+..... .-..+|+++
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~~--------~-~---~~Di~~~~~~~~~~~D~l~ 76 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFGE--------K-P---EGDITQVNEKTIPDHDILC 76 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHSC--------C-C---BSCGGGSCGGGSCCCSEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcCC--------C-C---cCCHHHcCHhhCCCCCEEE
Confidence 568999999999999988776 2 22578899999988877776532 1 1 566553321 113589999
Q ss_pred ecCCC
Q psy14962 96 LSTYV 100 (216)
Q Consensus 96 ~~~~~ 100 (216)
.+.+.
T Consensus 77 ~gpPC 81 (327)
T 2c7p_A 77 AGFPC 81 (327)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 87764
No 375
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.67 E-value=0.011 Score=48.30 Aligned_cols=95 Identities=24% Similarity=0.287 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
++.+|+-+|+|. |......++..+ .+|+++|.+++.++.+.+.+. ..+.....+.......-..+|+|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~~~~l~~~~~~~g---------~~~~~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG--ATVTVLDINIDKLRQLDAEFC---------GRIHTRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTT---------TSSEEEECCHHHHHHHHHHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhcC---------CeeEeccCCHHHHHHHHcCCCEE
Confidence 578999999977 666666676654 499999999988776654321 11211111100000001247999
Q ss_pred EecCCCCc------hHHHHHhcCCCCeEEEEee
Q psy14962 95 YLSTYVPE------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 95 ~~~~~~~~------~~~~~~~~L~~gG~lv~~~ 121 (216)
+.....+. +.+...+.++|||+++-..
T Consensus 236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 88554332 2477788999999987654
No 376
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.64 E-value=0.028 Score=47.38 Aligned_cols=89 Identities=19% Similarity=0.051 Sum_probs=61.9
Q ss_pred CCCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCcc
Q psy14962 14 IQEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFD 92 (216)
Q Consensus 14 ~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 92 (216)
..+|.+|+-+|+|. |......++..+ .+|+++|.++..++.+.+. | ..+. +.... . ...|
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~G--a~Viv~d~~~~~~~~A~~~----G--------a~~~--~l~e~-l--~~aD 331 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQG--ARVSVTEIDPINALQAMME----G--------FDVV--TVEEA-I--GDAD 331 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHT----T--------CEEC--CHHHH-G--GGCS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHc----C--------CEEe--cHHHH-H--hCCC
Confidence 46799999999988 777777777654 5999999999876665432 2 2221 21111 1 3479
Q ss_pred EEEecCCCCchHH-HHHhcCCCCeEEEEee
Q psy14962 93 AIYLSTYVPEIPY-SILLQLKPGGRLVCGV 121 (216)
Q Consensus 93 ~i~~~~~~~~~~~-~~~~~L~~gG~lv~~~ 121 (216)
+|+...+...++. ...+.+|+||+++..-
T Consensus 332 vVi~atgt~~~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 332 IVVTATGNKDIIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp EEEECSSSSCSBCHHHHHHSCTTCEEEECS
T ss_pred EEEECCCCHHHHHHHHHHhcCCCcEEEEeC
Confidence 9998877666554 7788899999987653
No 377
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=95.63 E-value=0.014 Score=47.03 Aligned_cols=95 Identities=12% Similarity=0.061 Sum_probs=60.1
Q ss_pred cCCCC-CeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHH----HHHHHHHHHHhCCCCCCCCCeEEEe------c
Q psy14962 13 KIQEG-AKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQ----CEDAWETVMRIRPDLLNDGRLHLRC------R 79 (216)
Q Consensus 13 ~~~~~-~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~----~~~a~~~~~~~~~~~~~~~~~~~~~------~ 79 (216)
.+++| ++||-.|+ |. |..+..+++..+ ++++++..+++. .+.++ +.| .+. ++. .
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~----~lG-----a~~--vi~~~~~~~~ 229 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLK----ELG-----ATQ--VITEDQNNSR 229 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHH----HHT-----CSE--EEEHHHHHCG
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHH----hcC-----CeE--EEecCccchH
Confidence 46789 99999997 65 889999999874 488777644432 33332 222 121 221 1
Q ss_pred cCCCCCC-----CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 80 DGRTGLL-----HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 80 d~~~~~~-----~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
|...... ....+|+|+-..+..... ...++|+++|+++..-
T Consensus 230 ~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 230 EFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp GGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTTCEEEECC
T ss_pred HHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccCCEEEEec
Confidence 1111110 134699999877765555 6779999999998753
No 378
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.62 E-value=0.018 Score=46.56 Aligned_cols=97 Identities=21% Similarity=0.162 Sum_probs=62.1
Q ss_pred CCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 17 GAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 17 ~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
+.+|+-+|+|. |......++..+ ++|+++|.+++.++.+.+.... .+.....+.......-..+|+|+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINVERLSYLETLFGS---------RVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHGG---------GSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhhCc---------eeEeeeCCHHHHHHHHcCCCEEE
Confidence 48999999977 666777777754 4999999999888777655432 22222111000000012589998
Q ss_pred ecCCCCc------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 96 LSTYVPE------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 96 ~~~~~~~------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
...+.+. +.+...+.+++||.++-....+
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~ 270 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQ 270 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCC
Confidence 7765543 2467778999999888765443
No 379
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=95.53 E-value=0.077 Score=42.65 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=57.3
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEE-eCCHH---HHHHHHHHHHHhCCCCCCCCCeEEEec------c
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGV-EHMRE---QCEDAWETVMRIRPDLLNDGRLHLRCR------D 80 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~-D~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~------d 80 (216)
.+++|++||-.|+ |. |..+..+++..+ ++++++ +.++. ..+.++ +.| .+. ++.. +
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~----~lG-----a~~--vi~~~~~~~~~ 230 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRPDIQKLSDRLK----SLG-----AEH--VITEEELRRPE 230 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCSCHHHHHHHHH----HTT-----CSE--EEEHHHHHSGG
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCccchHHHHHHHH----hcC-----CcE--EEecCcchHHH
Confidence 4789999999997 55 889999999874 466554 54432 233333 322 122 2211 1
Q ss_pred CCCCCCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 81 GRTGLLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 81 ~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
........+.+|+|+-...-... ....++|+++|+++..
T Consensus 231 ~~~~~~~~~~~Dvvid~~g~~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 231 MKNFFKDMPQPRLALNCVGGKSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp GGGTTSSSCCCSEEEESSCHHHH-HHHHTTSCTTCEEEEC
T ss_pred HHHHHhCCCCceEEEECCCcHHH-HHHHHhhCCCCEEEEE
Confidence 11111111248999987665444 4578999999999875
No 380
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.26 E-value=0.15 Score=34.94 Aligned_cols=94 Identities=11% Similarity=-0.004 Sum_probs=59.6
Q ss_pred CCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC----CCCCc
Q psy14962 17 GAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----HQAPF 91 (216)
Q Consensus 17 ~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~ 91 (216)
..+|+-+|+|. |......+... +..|+++|.+++.++.+++ ..+.++.+|...... .-..+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~------------~g~~~i~gd~~~~~~l~~a~i~~a 72 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRE------------RGVRAVLGNAANEEIMQLAHLECA 72 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH------------TTCEEEESCTTSHHHHHHTTGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH------------cCCCEEECCCCCHHHHHhcCcccC
Confidence 46899999876 54444333332 4599999999998776653 236678888753210 12468
Q ss_pred cEEEecCCCCc---hHHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|++++..+-.. ......+.+.|+..++.....+
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~~~ 108 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYD 108 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESSH
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 99987766543 1233456667888877765544
No 381
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.10 E-value=0.052 Score=43.61 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=62.7
Q ss_pred cCCCC--CeEEEEcC-CC-chHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--
Q psy14962 13 KIQEG--AKVLDIGS-GS-GFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-- 85 (216)
Q Consensus 13 ~~~~~--~~vldiG~-G~-G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 85 (216)
.+++| .+||-.|+ |. |..+..+++.. ++ +|++++.+++.++.+++.+ + .. . ++ |.....
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~---g-----~~-~-~~--d~~~~~~~ 220 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSEL---G-----FD-A-AI--NYKKDNVA 220 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTS---C-----CS-E-EE--ETTTSCHH
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHc---C-----Cc-e-EE--ecCchHHH
Confidence 46789 99999998 33 77777777774 56 9999999987776665421 1 11 1 11 211110
Q ss_pred -----CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 86 -----LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 86 -----~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
...+.+|+++.+... ..+....++|+++|+++..
T Consensus 221 ~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 221 EQLRESCPAGVDVYFDNVGG-NISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccCcEEEEE
Confidence 011269999987774 5667888999999999875
No 382
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=94.97 E-value=0.12 Score=40.37 Aligned_cols=92 Identities=12% Similarity=0.051 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe-ccCCCCCCCCCCccE
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC-RDGRTGLLHQAPFDA 93 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~ 93 (216)
.|.+|+-+|+|. |......++..+ .+|++.|.++...+.+. ..+ +.+.. .+... . -...|+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~----~~g--------~~~~~~~~l~~-~--l~~aDv 216 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALG--AKVKVGARESDLLARIA----EMG--------MEPFHISKAAQ-E--LRDVDV 216 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTT--------SEEEEGGGHHH-H--TTTCSE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHH----HCC--------CeecChhhHHH-H--hcCCCE
Confidence 688999999877 655555555543 49999999987554332 211 22221 11111 1 135899
Q ss_pred EEecCCCCchHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+...+..-+.....+.++||++++-....+
T Consensus 217 Vi~~~p~~~i~~~~l~~mk~~~~lin~ar~~ 247 (293)
T 3d4o_A 217 CINTIPALVVTANVLAEMPSHTFVIDLASKP 247 (293)
T ss_dssp EEECCSSCCBCHHHHHHSCTTCEEEECSSTT
T ss_pred EEECCChHHhCHHHHHhcCCCCEEEEecCCC
Confidence 9998887555566777899999887655443
No 383
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.83 E-value=0.029 Score=45.48 Aligned_cols=95 Identities=17% Similarity=0.118 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
++.+|+-+|+|. |......++.. +++|+++|.+++.++.+.+.. + ..+.....+.......-..+|+|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~---g------~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVF---G------GRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---T------TSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc---C------ceEEEecCCHHHHHHHHhCCCEE
Confidence 468999999966 65555566654 459999999998776655432 1 12222111110000001247999
Q ss_pred EecCCCCc------hHHHHHhcCCCCeEEEEee
Q psy14962 95 YLSTYVPE------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 95 ~~~~~~~~------~~~~~~~~L~~gG~lv~~~ 121 (216)
+...+... +.+...+.+++||.++...
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 98776543 2477788899999887654
No 384
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.66 E-value=0.17 Score=39.69 Aligned_cols=92 Identities=12% Similarity=0.048 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe-ccCCCCCCCCCCccE
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC-RDGRTGLLHQAPFDA 93 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~ 93 (216)
.+.+|+-+|+|. |......++.. +.+|++.|.+++..+.+.+ .+ +.... .+.... -...|+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~----~g--------~~~~~~~~l~~~---l~~aDv 218 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITE----MG--------LVPFHTDELKEH---VKDIDI 218 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TT--------CEEEEGGGHHHH---STTCSE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----CC--------CeEEchhhHHHH---hhCCCE
Confidence 578999999977 55555555554 4599999998865443322 11 22221 121111 135799
Q ss_pred EEecCCCCchHHHHHhcCCCCeEEEEeecCC
Q psy14962 94 IYLSTYVPEIPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 94 i~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+...+.+-+.+...+.++||++++-....+
T Consensus 219 Vi~~~p~~~i~~~~~~~mk~g~~lin~a~g~ 249 (300)
T 2rir_A 219 CINTIPSMILNQTVLSSMTPKTLILDLASRP 249 (300)
T ss_dssp EEECCSSCCBCHHHHTTSCTTCEEEECSSTT
T ss_pred EEECCChhhhCHHHHHhCCCCCEEEEEeCCC
Confidence 9998887655566778899999887655444
No 385
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.65 E-value=0.33 Score=34.74 Aligned_cols=94 Identities=14% Similarity=0.032 Sum_probs=54.8
Q ss_pred CCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---C--CCCC
Q psy14962 17 GAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL---L--HQAP 90 (216)
Q Consensus 17 ~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~--~~~~ 90 (216)
+.+|+-+|+|. |......+...+ +..|+++|.+++.++.+++ ..+.++.+|..... . .-..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~------------~g~~~~~gd~~~~~~l~~~~~~~~ 105 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRS------------EGRNVISGDATDPDFWERILDTGH 105 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHH------------TTCCEEECCTTCHHHHHTBCSCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHH------------CCCCEEEcCCCCHHHHHhccCCCC
Confidence 56899998865 444433333320 3489999999987765542 12456666654210 1 1245
Q ss_pred ccEEEecCCCCchH---HHHHhcCCCCeEEEEeecC
Q psy14962 91 FDAIYLSTYVPEIP---YSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 91 ~D~i~~~~~~~~~~---~~~~~~L~~gG~lv~~~~~ 123 (216)
+|+|++..+-.... ....+.+.|+..++.....
T Consensus 106 ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 106 VKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 89999866543322 2344556677777765443
No 386
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.60 E-value=0.17 Score=41.57 Aligned_cols=94 Identities=19% Similarity=0.250 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC------C--CCCC
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG------R--TGLL 86 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~------~--~~~~ 86 (216)
++.+|+-+|+|. |.....+++.+| ++|+++|.++..++.+.+. | .++...+. . ....
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~~----G--------~~~~~~~~~~~~d~~~~~~ya 254 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRPAAKEQVASL----G--------AKFIAVEDEEFKAAETAGGYA 254 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSTTHHHHHHHT----T--------CEECCCCC-------------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHc----C--------Cceeecccccccccccccchh
Confidence 568999999998 777777888764 5999999999887776542 1 12221110 0 0000
Q ss_pred ---------------C--CCCccEEEecCCCC-----c-hHHHHHhcCCCCeEEEEeecC
Q psy14962 87 ---------------H--QAPFDAIYLSTYVP-----E-IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 87 ---------------~--~~~~D~i~~~~~~~-----~-~~~~~~~~L~~gG~lv~~~~~ 123 (216)
. -...|+|+.....+ . +.+.+.+.+|||+.++=....
T Consensus 255 ~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d 314 (405)
T 4dio_A 255 KEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE 314 (405)
T ss_dssp ----CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred hhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence 0 03579998764332 2 448899999999998876543
No 387
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.53 E-value=0.066 Score=42.85 Aligned_cols=93 Identities=14% Similarity=0.004 Sum_probs=59.7
Q ss_pred CCC-CeEEEE-cCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC------
Q psy14962 15 QEG-AKVLDI-GSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL------ 85 (216)
Q Consensus 15 ~~~-~~vldi-G~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------ 85 (216)
.++ .+||-. |+|. |..+..+++..+ ++|++++.+++.++.+++. | .+ .++..+-....
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~~----G-----a~--~~~~~~~~~~~~~v~~~ 228 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEG--FRPIVTVRRDEQIALLKDI----G-----AA--HVLNEKAPDFEATLREV 228 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESCGGGHHHHHHH----T-----CS--EEEETTSTTHHHHHHHH
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHc----C-----CC--EEEECCcHHHHHHHHHH
Confidence 345 566654 5555 788888888874 5999999999888877643 2 11 12221111000
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
.....+|+|+.......+ ....++|+++|+++..-
T Consensus 229 ~~~~g~D~vid~~g~~~~-~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 229 MKAEQPRIFLDAVTGPLA-SAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HHHHCCCEEEESSCHHHH-HHHHHHSCTTCEEEECC
T ss_pred hcCCCCcEEEECCCChhH-HHHHhhhcCCCEEEEEe
Confidence 001369999987765544 67889999999998853
No 388
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=94.36 E-value=0.04 Score=44.18 Aligned_cols=94 Identities=21% Similarity=0.154 Sum_probs=55.6
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC--CCC--C
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR--TGL--L 86 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~--~~~--~ 86 (216)
.+++|++||-.|+ |. |..+..+++..+ +..|++++ +++..+.++ .+ .+ .++..+.. ... .
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~g-----a~--~~~~~~~~~~~~~~~~ 204 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DS-----VT--HLFDRNADYVQEVKRI 204 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GG-----SS--EEEETTSCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cC-----Cc--EEEcCCccHHHHHHHh
Confidence 4689999999998 44 778888887753 35899988 444444433 12 11 12221110 000 1
Q ss_pred CCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 87 HQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 ~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
..+.+|+|+-...-..+ ....++|+++|++++.-
T Consensus 205 ~~~g~Dvv~d~~g~~~~-~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 205 SAEGVDIVLDCLCGDNT-GKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CTTCEEEEEEECC--------CTTEEEEEEEEEEC
T ss_pred cCCCceEEEECCCchhH-HHHHHHhhcCCEEEEEC
Confidence 13569999977665544 67889999999998753
No 389
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.29 E-value=0.091 Score=41.25 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcE-EEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC----CC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGR-VFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH----QA 89 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~-v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~ 89 (216)
..+.+|+|+.||.|.++..+.+. |-... |.++|+++...+.-+.+. ....+..+|+...... .+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~----------~~~~~~~~DI~~i~~~~i~~~~ 82 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH----------QGKIMYVGDVRSVTQKHIQEWG 82 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT----------TTCEEEECCGGGCCHHHHHHTC
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC----------CCCceeCCChHHccHHHhcccC
Confidence 45668999999999999887765 22222 589999998776555442 2345677887643211 13
Q ss_pred CccEEEecCC
Q psy14962 90 PFDAIYLSTY 99 (216)
Q Consensus 90 ~~D~i~~~~~ 99 (216)
.+|+++.+.+
T Consensus 83 ~~Dll~ggpP 92 (295)
T 2qrv_A 83 PFDLVIGGSP 92 (295)
T ss_dssp CCSEEEECCC
T ss_pred CcCEEEecCC
Confidence 6899987655
No 390
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.12 E-value=0.17 Score=41.80 Aligned_cols=88 Identities=16% Similarity=0.034 Sum_probs=58.0
Q ss_pred CCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 15 QEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
-.|.+|+-+|+|. |......++.+ +.+|+++|.++.....+.. ....+. +.... -...|+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~--Ga~Viv~D~dp~ra~~A~~------------~G~~v~--~Leea---l~~ADI 278 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAM--GSIVYVTEIDPICALQACM------------DGFRLV--KLNEV---IRQVDI 278 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH------------TTCEEC--CHHHH---TTTCSE
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCChhhhHHHHH------------cCCEec--cHHHH---HhcCCE
Confidence 4789999999998 77777777765 4599999999865443321 112221 21111 124699
Q ss_pred EEecCCCCchH-HHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPEIP-YSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~~~-~~~~~~L~~gG~lv~~~ 121 (216)
|+......+++ ....+.+|+|++++-.-
T Consensus 279 Vi~atgt~~lI~~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 279 VITCTGNKNVVTREHLDRMKNSCIVCNMG 307 (435)
T ss_dssp EEECSSCSCSBCHHHHHHSCTTEEEEECS
T ss_pred EEECCCCcccCCHHHHHhcCCCcEEEEec
Confidence 98865555554 47888999998876653
No 391
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.06 E-value=0.067 Score=43.52 Aligned_cols=95 Identities=22% Similarity=0.333 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc----CCCCC-----
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD----GRTGL----- 85 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d----~~~~~----- 85 (216)
++.+|+-+|+|. |......++..| ++|+++|.++..++.+.+. | .+++..+ .....
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~l----G--------a~~~~l~~~~~~~~gya~~~~ 248 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG--AKTTGYDVRPEVAEQVRSV----G--------AQWLDLGIDAAGEGGYARELS 248 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHHT----T--------CEECCCC-------------C
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHc----C--------CeEEeccccccccccchhhhh
Confidence 578999999998 777777787775 4999999999877776542 1 1222111 00000
Q ss_pred ----------C--CCCCccEEEecCCCC-----c-hHHHHHhcCCCCeEEEEeecCC
Q psy14962 86 ----------L--HQAPFDAIYLSTYVP-----E-IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 86 ----------~--~~~~~D~i~~~~~~~-----~-~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
. .-...|+|+.....+ . +.+.+.+.+|||+.++=....+
T Consensus 249 ~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~ 305 (381)
T 3p2y_A 249 EAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred HHHHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC
Confidence 0 014689999764222 2 3488999999999887654433
No 392
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.98 E-value=0.037 Score=48.67 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh------CCC-----cEEEEEeC---CHHHHHHHH-----------HHHHHhCCCC--
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV------GKT-----GRVFGVEH---MREQCEDAW-----------ETVMRIRPDL-- 68 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~------~~~-----~~v~~~D~---~~~~~~~a~-----------~~~~~~~~~~-- 68 (216)
+.-+|+|+|.|+|+....+.+.. +|. .+++++|. +.+.+..+- +.+..+....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34589999999999776665532 111 37899998 444444322 2222211000
Q ss_pred -----C--CCCCeEEEeccCCCCCCC-----CCCccEEEecCCCC---------chHHHHHhcCCCCeEEEEe
Q psy14962 69 -----L--NDGRLHLRCRDGRTGLLH-----QAPFDAIYLSTYVP---------EIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 69 -----~--~~~~~~~~~~d~~~~~~~-----~~~~D~i~~~~~~~---------~~~~~~~~~L~~gG~lv~~ 120 (216)
+ +...+++..+|+...... .+.+|+++.+.-.+ .++..+.++++|||++...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 0 012456677776532221 36799999976542 2568899999999987653
No 393
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=93.88 E-value=0.15 Score=44.59 Aligned_cols=104 Identities=18% Similarity=0.131 Sum_probs=62.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHh------CC-----CcEEEEEeC---CHHHHHHHHH-----------HHHHhCCCCCC-
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELV------GK-----TGRVFGVEH---MREQCEDAWE-----------TVMRIRPDLLN- 70 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~------~~-----~~~v~~~D~---~~~~~~~a~~-----------~~~~~~~~~~~- 70 (216)
.-+|+|+|-|+|.......+.. +| ..+++++|. +++.+..+-. ....+.. .+.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 145 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPM-PLPG 145 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCC-CCSE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcc-cCCC
Confidence 3589999999998776654432 11 136899998 7776653322 2222211 000
Q ss_pred ---------CCCeEEEeccCCCCCC-----CCCCccEEEecCCCC---------chHHHHHhcCCCCeEEEEee
Q psy14962 71 ---------DGRLHLRCRDGRTGLL-----HQAPFDAIYLSTYVP---------EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 71 ---------~~~~~~~~~d~~~~~~-----~~~~~D~i~~~~~~~---------~~~~~~~~~L~~gG~lv~~~ 121 (216)
...+++..+|+..... ....||+++.+.-.+ .++..+.++++|||++....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0223455566542221 135799999976542 25688999999999987543
No 394
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.73 E-value=0.069 Score=43.87 Aligned_cols=93 Identities=20% Similarity=0.213 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC------------
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR------------ 82 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~------------ 82 (216)
++.+|+-+|+|. |..+..+++.++ +.|+++|.++..++.+.+. + ..+...+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~~l----G--------a~~~~~~~~~~~~~~~g~~~~ 236 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQSM----G--------AEFLELDFKEEAGSGDGYAKV 236 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHHHT----T--------CEECCC--------CCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHc----C--------CEEEEecccccccccccchhh
Confidence 578999999988 777777887764 5899999999877665331 1 222211110
Q ss_pred --C--------CCC-CCCCccEEEecCCCC-----ch-HHHHHhcCCCCeEEEEeec
Q psy14962 83 --T--------GLL-HQAPFDAIYLSTYVP-----EI-PYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 83 --~--------~~~-~~~~~D~i~~~~~~~-----~~-~~~~~~~L~~gG~lv~~~~ 122 (216)
. ... .-...|+|+.....+ .+ .+.+.+.++|||+++-...
T Consensus 237 ~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 237 MSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HSHHHHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred ccHHHHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 0 000 002479999874232 33 3678888999999887653
No 395
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.70 E-value=0.099 Score=41.78 Aligned_cols=72 Identities=22% Similarity=0.170 Sum_probs=49.0
Q ss_pred CeEEEEcCCCchHHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC---CCCccE
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVGKT-GRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH---QAPFDA 93 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~ 93 (216)
.+++|+.||.|.++..+.+. +.. .-|.++|+++...+.-+.+.. ...+...|+...... ...+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~~DI~~~~~~~~~~~~~D~ 72 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP----------ETNLLNRNIQQLTPQVIKKWNVDT 72 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT----------TSCEECCCGGGCCHHHHHHTTCCE
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC----------CCceeccccccCCHHHhccCCCCE
Confidence 47999999999999888776 222 247899999987766655532 234667776543221 125899
Q ss_pred EEecCCC
Q psy14962 94 IYLSTYV 100 (216)
Q Consensus 94 i~~~~~~ 100 (216)
++.+.+-
T Consensus 73 l~ggpPC 79 (333)
T 4h0n_A 73 ILMSPPC 79 (333)
T ss_dssp EEECCCC
T ss_pred EEecCCC
Confidence 9877663
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.65 E-value=0.11 Score=42.25 Aligned_cols=92 Identities=18% Similarity=0.249 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC------------
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR------------ 82 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~------------ 82 (216)
++.+|+-+|+|. |.....+++.++ ++|+++|.++...+.+++ + + ..+...+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~-~---G--------a~~~~i~~~~~~~~~~~~~~~ 236 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVES-L---G--------GKFITVDDEAMKTAETAGGYA 236 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHH-T---T--------CEECCC---------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH-c---C--------CeEEeecccccccccccccch
Confidence 688999999988 777778888765 489999999876666543 1 1 111100000
Q ss_pred ---C-C--------CC-CCCCccEEEecCCC-----Cch-HHHHHhcCCCCeEEEEee
Q psy14962 83 ---T-G--------LL-HQAPFDAIYLSTYV-----PEI-PYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 83 ---~-~--------~~-~~~~~D~i~~~~~~-----~~~-~~~~~~~L~~gG~lv~~~ 121 (216)
. . .. .-..+|+|+..... +.+ .....+.++|||+++-..
T Consensus 237 ~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 237 KEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp --------CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred hhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 0 0 00 01358999977622 223 377888899999987754
No 397
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.63 E-value=1 Score=34.12 Aligned_cols=80 Identities=10% Similarity=-0.002 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSG-FMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G-~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.+.++|-.|++.+ .++..+++.+ ..+.+|+.++.++...+.+.+.....+ ..++.++.+|+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD-----RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS-----SCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC-----CCCceEEeCCCCCHHHHHHHHHH
Confidence 4678888887632 2333333332 125699999988766665555544422 2368899999864321
Q ss_pred ---CCCCccEEEecCCC
Q psy14962 87 ---HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 81 ~~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAF 97 (266)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCeeEEEEcccc
Confidence 01468999877653
No 398
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.59 E-value=0.19 Score=39.75 Aligned_cols=68 Identities=13% Similarity=-0.049 Sum_probs=47.1
Q ss_pred eEEEEcCCCchHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC-CCCccEEEe
Q psy14962 19 KVLDIGSGSGFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH-QAPFDAIYL 96 (216)
Q Consensus 19 ~vldiG~G~G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~i~~ 96 (216)
+|+|+.||.|.++.-+-+. +. -+.++|+++...+.-+.+. .-.++.+|....... -..+|+++.
T Consensus 2 kvidLFsG~GG~~~G~~~a---G~~~v~a~e~d~~a~~ty~~N~-----------~~~~~~~DI~~i~~~~~~~~D~l~g 67 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA---GFRIICANEYDKSIWKTYESNH-----------SAKLIKGDISKISSDEFPKCDGIIG 67 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT---TCEEEEEEECCTTTHHHHHHHC-----------CSEEEESCGGGCCGGGSCCCSEEEC
T ss_pred eEEEeCcCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHHC-----------CCCcccCChhhCCHhhCCcccEEEe
Confidence 7999999999998887665 33 4678999998766554442 235677887643321 245899987
Q ss_pred cCCC
Q psy14962 97 STYV 100 (216)
Q Consensus 97 ~~~~ 100 (216)
+.+-
T Consensus 68 gpPC 71 (331)
T 3ubt_Y 68 GPPS 71 (331)
T ss_dssp CCCG
T ss_pred cCCC
Confidence 7663
No 399
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.41 E-value=0.73 Score=35.01 Aligned_cols=80 Identities=11% Similarity=0.090 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSG-FMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G-~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.|+++|--|++++ .++..+++.+. .+++|+.++.+++.++.+.+.+.+.+ ..++.++..|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-----QPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-----CSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCcEEEEEccCCCHHHHHHHHHH
Confidence 5888999997431 23333333221 26799999999988888777766533 3578888899763211
Q ss_pred ---CCCCccEEEecCCC
Q psy14962 87 ---HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 80 ~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHHhCCCCEEEecccc
Confidence 12678999877653
No 400
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.25 E-value=0.042 Score=38.65 Aligned_cols=95 Identities=18% Similarity=0.094 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC-----CCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH-----QAP 90 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~ 90 (216)
...-|+|+|-|+|..=.++.+.+ |+..|+++|-.-.. +- . -.++.-+++.+|+.+.... ..+
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR~~~~------hp-~-----~~P~~e~~ilGdi~~tL~~~~~r~g~~ 106 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHV-QGREIYVFERAVAS------HP-D-----STPPEAQLILGDIRETLPATLERFGAT 106 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHC-CSSCEEEEESSCCC------CG-G-----GCCCGGGEEESCHHHHHHHHHHHHCSC
T ss_pred CCCceEEecCCCChhHHHHHHhC-CCCcEEEEEeeecc------CC-C-----CCCchHheecccHHHHHHHHHHhcCCc
Confidence 34589999999999988988887 56799999832110 00 0 0122334555554432211 223
Q ss_pred ccEEEecCCCC----------chHHHHHhcCCCCeEEEEeecC
Q psy14962 91 FDAIYLSTYVP----------EIPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 91 ~D~i~~~~~~~----------~~~~~~~~~L~~gG~lv~~~~~ 123 (216)
.-++.++.+.. ++...+..+|.|||+++-..+-
T Consensus 107 a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 107 ASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp EEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred eEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 33344443332 2446777899999999875443
No 401
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.99 E-value=0.89 Score=30.81 Aligned_cols=93 Identities=14% Similarity=0.101 Sum_probs=54.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC----CCCCCc
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----LHQAPF 91 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~ 91 (216)
..+|+-+|+|. ++..+++.+. .+.+|+++|.+++.++.+++ ....++.+|..... ..-..+
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~------------~~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLED------------EGFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------------TTCEEEECCTTCHHHHHHSCCTTC
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH------------CCCcEEECCCCCHHHHHhCCcccC
Confidence 46899999865 4444443331 24589999999987766543 23567788875321 112458
Q ss_pred cEEEecCCCCch---HHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLSTYVPEI---PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~~~~~~~---~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+|++..+.... .....+.+. ...++.....+
T Consensus 72 d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia~~~~~ 106 (141)
T 3llv_A 72 SAVLITGSDDEFNLKILKALRSVS-DVYAIVRVSSP 106 (141)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHC-CCCEEEEESCG
T ss_pred CEEEEecCCHHHHHHHHHHHHHhC-CceEEEEEcCh
Confidence 999887764321 223333444 55555544433
No 402
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.92 E-value=0.7 Score=34.61 Aligned_cols=95 Identities=16% Similarity=0.078 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.+.+||-+|+|. |..-...+.. .++.|+.++.... ....+.... .++.++..+...... ..+|+|
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~--~GA~VtVvap~~~--~~l~~l~~~--------~~i~~i~~~~~~~dL--~~adLV 95 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ--EGAAITVVAPTVS--AEINEWEAK--------GQLRVKRKKVGEEDL--LNVFFI 95 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG--GCCCEEEECSSCC--HHHHHHHHT--------TSCEEECSCCCGGGS--SSCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEECCCCC--HHHHHHHHc--------CCcEEEECCCCHhHh--CCCCEE
Confidence 578999999986 3333333333 2457887764422 112222222 457777665543322 358999
Q ss_pred EecCCCCchHHHHHhcCCCCeEEEEeecCCC
Q psy14962 95 YLSTYVPEIPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 95 ~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
++....+..-..+....+ -|.++-.+..|.
T Consensus 96 IaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~ 125 (223)
T 3dfz_A 96 VVATNDQAVNKFVKQHIK-NDQLVNMASSFS 125 (223)
T ss_dssp EECCCCTHHHHHHHHHSC-TTCEEEC-----
T ss_pred EECCCCHHHHHHHHHHHh-CCCEEEEeCCcc
Confidence 998888877777777777 788877766654
No 403
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.91 E-value=0.99 Score=36.54 Aligned_cols=95 Identities=12% Similarity=0.120 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
.+.+||.++.+.|.+++.++.. .++.+.-|--.....+.++..++++ ..++++... ... ..+.||+|+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~---~~~~~~~~~--~~~--~~~~~~~v~ 105 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGID---ESSVKFLDS--TAD--YPQQPGVVL 105 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCC---GGGSEEEET--TSC--CCSSCSEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCC---ccceEeccc--ccc--cccCCCEEE
Confidence 5678999999999999988754 3345533555555666777776631 223444322 112 235699998
Q ss_pred ecCCCC-----chHHHHHhcCCCCeEEEEeec
Q psy14962 96 LSTYVP-----EIPYSILLQLKPGGRLVCGVG 122 (216)
Q Consensus 96 ~~~~~~-----~~~~~~~~~L~~gG~lv~~~~ 122 (216)
...+-. ..+..+...|++|+.+++.-.
T Consensus 106 ~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 106 IKVPKTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp EECCSCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred EEcCCCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 876643 245788899999999977544
No 404
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.85 E-value=0.18 Score=40.18 Aligned_cols=72 Identities=7% Similarity=0.028 Sum_probs=49.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhCCCc-EE-EEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC---CCCc
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVGKTG-RV-FGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH---QAPF 91 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~~~~-~v-~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~ 91 (216)
..+++|+.||.|.++..+.+. |-.. .+ .++|+++...+.-+.+... . ++..|+...... ...+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~---------~--~~~~DI~~~~~~~i~~~~~ 77 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKE---------E--VQVKNLDSISIKQIESLNC 77 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCC---------C--CBCCCTTTCCHHHHHHTCC
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCC---------C--cccCChhhcCHHHhccCCC
Confidence 458999999999999888765 2112 46 6999999988777666532 1 456676543221 1258
Q ss_pred cEEEecCCC
Q psy14962 92 DAIYLSTYV 100 (216)
Q Consensus 92 D~i~~~~~~ 100 (216)
|+++.+.+-
T Consensus 78 Dil~ggpPC 86 (327)
T 3qv2_A 78 NTWFMSPPC 86 (327)
T ss_dssp CEEEECCCC
T ss_pred CEEEecCCc
Confidence 999877663
No 405
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.78 E-value=1.3 Score=34.38 Aligned_cols=78 Identities=9% Similarity=-0.023 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSG-FMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G-~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.++++|-.|++.| .++..+++.+ ..+++|+.++.++...+.+.+..... .++.++.+|+.+...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-------GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-------TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------CCceEEECCCCCHHHHHHHHHH
Confidence 4778999997643 2444443332 12568999998876655555544442 357888888763210
Q ss_pred ---CCCCccEEEecCCC
Q psy14962 87 ---HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 103 ~~~~~g~iD~lVnnAG~ 119 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGF 119 (293)
T ss_dssp HHHHTSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCcc
Confidence 11478999987664
No 406
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.72 E-value=1.4 Score=33.68 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHM------------REQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
.+++||-.|++.| ++..+++.+ ..+++|+.+|.+ .+.++.+...+...+ .++.++..|+.
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~ 81 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG------RKAYTAEVDVR 81 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT------SCEEEEECCTT
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC------CceEEEEccCC
Confidence 4677888887654 444444333 125699999987 666666655555432 57888899976
Q ss_pred CCCC----------CCCCccEEEecCCCCc-----------------------hHHHHHhcCCCCeEEEEe
Q psy14962 83 TGLL----------HQAPFDAIYLSTYVPE-----------------------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 83 ~~~~----------~~~~~D~i~~~~~~~~-----------------------~~~~~~~~L~~gG~lv~~ 120 (216)
+... ..+.+|+++.+..... +.+.+...++++|.++..
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 3211 0146899998766411 114555677778887664
No 407
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=92.66 E-value=0.41 Score=39.75 Aligned_cols=88 Identities=14% Similarity=-0.070 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 15 QEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
-.|++|+-+|+|. |......++.+ +.+|++.|.++.....+. . ....+. +.... . ...|+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lraf--Ga~Viv~d~dp~~a~~A~----~--------~G~~vv--~LeEl-L--~~ADI 305 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGA--GARVKVTEVDPICALQAA----M--------DGFEVV--TLDDA-A--STADI 305 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHH----H--------TTCEEC--CHHHH-G--GGCSE
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCcchhhHHH----h--------cCceec--cHHHH-H--hhCCE
Confidence 4789999999998 76666666665 459999999886543332 1 112222 21111 1 24699
Q ss_pred EEecCCCCchH-HHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPEIP-YSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~~~-~~~~~~L~~gG~lv~~~ 121 (216)
|+......+++ ....+.+|+|++++-.-
T Consensus 306 Vv~atgt~~lI~~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 306 VVTTTGNKDVITIDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp EEECCSSSSSBCHHHHHHSCTTEEEEECS
T ss_pred EEECCCCccccCHHHHhcCCCCeEEEEcC
Confidence 98876655554 67888899999887543
No 408
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.31 E-value=0.29 Score=34.06 Aligned_cols=97 Identities=11% Similarity=-0.029 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--C--CCC
Q psy14962 15 QEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--L--HQA 89 (216)
Q Consensus 15 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~--~~~ 89 (216)
.++.+|+-+|+|. |......+... +..|+++|.+++.++.+++ . ....++.+|..... . ...
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~---~--------~g~~~~~~d~~~~~~l~~~~~~ 83 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNS---E--------FSGFTVVGDAAEFETLKECGME 83 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCT---T--------CCSEEEESCTTSHHHHHTTTGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHh---c--------CCCcEEEecCCCHHHHHHcCcc
Confidence 4678999999866 54444444442 4589999998876543321 1 23445556643210 0 123
Q ss_pred CccEEEecCCCCchHH---HHHhcCCCCeEEEEeecCC
Q psy14962 90 PFDAIYLSTYVPEIPY---SILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 90 ~~D~i~~~~~~~~~~~---~~~~~L~~gG~lv~~~~~~ 124 (216)
.+|+|+...+...... .+.+.+.+...++.....+
T Consensus 84 ~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 84 KADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp GCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred cCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 5899998777654332 3334455556666655544
No 409
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.20 E-value=0.63 Score=35.59 Aligned_cols=78 Identities=14% Similarity=0.107 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
+|+.+|--|++.|. +..+++.+ ..+++|+.+|.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 6 ~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g------~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 6 KNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG------KEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHH
Confidence 47788888876653 33333332 136799999999999888888777654 578889999863221
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
.-+..|+++.+...
T Consensus 79 ~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 79 FETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCcc
Confidence 12678999987763
No 410
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.13 E-value=0.71 Score=37.59 Aligned_cols=45 Identities=18% Similarity=0.149 Sum_probs=34.4
Q ss_pred CeEEEEcCCCchHHHHHHHHhC------CCcEEEEEeCCHHHHHHHHHHHH
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVG------KTGRVFGVEHMREQCEDAWETVM 62 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~------~~~~v~~~D~~~~~~~~a~~~~~ 62 (216)
..|+|+|+|.|.++..+++.+. ...+++.+|+|+...+.-++.+.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 4699999999999988876542 12489999999998876555543
No 411
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.08 E-value=0.8 Score=37.65 Aligned_cols=95 Identities=12% Similarity=0.081 Sum_probs=62.0
Q ss_pred CCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC----CCCCCc
Q psy14962 17 GAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----LHQAPF 91 (216)
Q Consensus 17 ~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~ 91 (216)
+.+|+-+|+|. |......+... +..|+++|.+++.++.+++ ..+.++.+|..... ..-..+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~------------~g~~vi~GDat~~~~L~~agi~~A 69 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRK------------FGMKVFYGDATRMDLLESAGAAKA 69 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHH------------TTCCCEESCTTCHHHHHHTTTTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHh------------CCCeEEEcCCCCHHHHHhcCCCcc
Confidence 45799999866 44444444432 4589999999998877653 23567888876421 112468
Q ss_pred cEEEecCCCCc---hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 92 DAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 92 D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
|+|++..+-.. ......+.+.|...++.......
T Consensus 70 ~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 70 EVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp SEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEESSHH
T ss_pred CEEEECCCChHHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 98888766543 22445566778888888766553
No 412
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.06 E-value=0.11 Score=40.76 Aligned_cols=52 Identities=29% Similarity=0.314 Sum_probs=38.2
Q ss_pred CCeEEEeccCCCC--CCCCCCccEEEecCCCCc--------------------------hHHHHHhcCCCCeEEEEeecC
Q psy14962 72 GRLHLRCRDGRTG--LLHQAPFDAIYLSTYVPE--------------------------IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 72 ~~~~~~~~d~~~~--~~~~~~~D~i~~~~~~~~--------------------------~~~~~~~~L~~gG~lv~~~~~ 123 (216)
.++.++++|.... ..++++||+|+++.+... ++.++.++|+|||.+++.+..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 4678999997642 234578999999998731 235777999999999887654
No 413
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.03 E-value=0.69 Score=29.97 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CC-cEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC---CCCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KT-GRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL---HQAP 90 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~ 90 (216)
.+.+|+-+|+ |.++..+++.+. .+ .+|+++|.+++.++... . ..+.+...|...... .-..
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--------~~~~~~~~d~~~~~~~~~~~~~ 69 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--------MGVATKQVDAKDEAGLAKALGG 69 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--------TTCEEEECCTTCHHHHHHHTTT
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--------CCCcEEEecCCCHHHHHHHHcC
Confidence 3568999998 555544443321 23 68999999987665543 2 345667777643110 0135
Q ss_pred ccEEEecCCCCchHHHHHhcCCCCeEE
Q psy14962 91 FDAIYLSTYVPEIPYSILLQLKPGGRL 117 (216)
Q Consensus 91 ~D~i~~~~~~~~~~~~~~~~L~~gG~l 117 (216)
+|+|+...+.......+...++.|...
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~g~~~ 96 (118)
T 3ic5_A 70 FDAVISAAPFFLTPIIAKAAKAAGAHY 96 (118)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEE
T ss_pred CCEEEECCCchhhHHHHHHHHHhCCCE
Confidence 899998876554433333444444443
No 414
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.60 E-value=0.9 Score=34.41 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++. .++..+++.+ ..+++|+.++.+++.++...+.+. .++.++..|..+...
T Consensus 7 ~gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 7 QGKKAIVIGGTH-GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---------PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---------CcceEEEccCCCHHHHHHHHHHH
Confidence 467888888665 4444444433 125699999999887766555431 468888889763221
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 77 GQTLGAIDLLHINAGV 92 (255)
T ss_dssp HHHHSSEEEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 01478999887664
No 415
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.55 E-value=2.1 Score=28.55 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=51.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC----CCCCCc
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----LHQAPF 91 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~ 91 (216)
+.+|+-+|+|. ++..+++.+. .+.+|+.+|.+++.++...+. ..+.++.+|..... ..-..+
T Consensus 4 ~m~i~IiG~G~--iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-----------~~~~~~~~d~~~~~~l~~~~~~~~ 70 (140)
T 1lss_A 4 GMYIIIAGIGR--VGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-----------IDALVINGDCTKIKTLEDAGIEDA 70 (140)
T ss_dssp -CEEEEECCSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------CSSEEEESCTTSHHHHHHTTTTTC
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-----------cCcEEEEcCCCCHHHHHHcCcccC
Confidence 35788888754 4444443321 245899999998766544321 13456666653211 112358
Q ss_pred cEEEecCCCCch---HHHHHhcCCCCeEEEEeecCC
Q psy14962 92 DAIYLSTYVPEI---PYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 92 D~i~~~~~~~~~---~~~~~~~L~~gG~lv~~~~~~ 124 (216)
|+|+...+.... ...+.+.+.++ .+++....+
T Consensus 71 d~vi~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~~ 105 (140)
T 1lss_A 71 DMYIAVTGKEEVNLMSSLLAKSYGIN-KTIARISEI 105 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHTTCC-CEEEECSST
T ss_pred CEEEEeeCCchHHHHHHHHHHHcCCC-EEEEEecCH
Confidence 999887665432 23444556665 455544433
No 416
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=91.36 E-value=0.3 Score=49.19 Aligned_cols=99 Identities=19% Similarity=0.101 Sum_probs=66.1
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEecc--CCC---CC
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRD--GRT---GL 85 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d--~~~---~~ 85 (216)
.+++|.+||-.|+ |. |..++.+++.. +++|++++.+++..+.+++.+...+ ...+ +-..+ +.. ..
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lg-----a~~v-~~~~~~~~~~~i~~~ 1735 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLD-----ETCF-ANSRDTSFEQHVLRH 1735 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCC-----STTE-EESSSSHHHHHHHHT
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCC-----ceEE-ecCCCHHHHHHHHHh
Confidence 4789999999975 55 88889999986 4599999999888777765432111 1221 11111 100 11
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
.....+|+|+-... ...+....++|+++|+++..
T Consensus 1736 t~g~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1736 TAGKGVDLVLNSLA-EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp TTSCCEEEEEECCC-HHHHHHHHTTEEEEEEEEEC
T ss_pred cCCCCceEEEECCC-chHHHHHHHhcCCCcEEEEe
Confidence 12346999998664 56678888999999998875
No 417
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.30 E-value=1 Score=34.85 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.|+.+|--|++.| ++..+++.+ ..+++|+.+|.+++.++.+.+.+ + .++..+.+|+.+...
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g------~~~~~~~~Dv~~~~~v~~~~~~~ 97 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G------GGAVGIQADSANLAELDRLYEKV 97 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C------TTCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C------CCeEEEEecCCCHHHHHHHHHHH
Confidence 4777888887665 333343333 23679999999998877665443 2 467788888753221
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..++.|+++.+...
T Consensus 98 ~~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 98 KAEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHHSCEEEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 12678999887764
No 418
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=91.16 E-value=4.7 Score=32.03 Aligned_cols=102 Identities=14% Similarity=0.152 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhC-------CC---------CCCCCCeEEEe
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIR-------PD---------LLNDGRLHLRC 78 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-------~~---------~~~~~~~~~~~ 78 (216)
.+...|+.+|||.......+.... ++..++-+|. |+.++.-++.+...+ .. .+...+..++.
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 355789999999999888877652 3457788887 777777766665531 00 00125788898
Q ss_pred ccCCCC-C--------CCCCCccEEEecCCCCc--------hHHHHHhcCCCCeEEEE
Q psy14962 79 RDGRTG-L--------LHQAPFDAIYLSTYVPE--------IPYSILLQLKPGGRLVC 119 (216)
Q Consensus 79 ~d~~~~-~--------~~~~~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~ 119 (216)
.|+... . ...+...++++-..+.. ++..+.+.. |+|.+++
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEE
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEE
Confidence 998642 1 11234456666555543 334444544 6777654
No 419
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.01 E-value=2.1 Score=33.06 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=58.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHH-HHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMRE-QCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.++++|-.|++. .++..+++.+. .+++|+.++.++. ..+...+..... ..++.++.+|+.+...
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE------GVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT------TCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHHHH
Confidence 356788887654 44544544431 2569999988765 333444444432 2578888899763210
Q ss_pred ---CCCCccEEEecCCCCc--------------------------hHHHHHhcCCCCeEEEEe
Q psy14962 87 ---HQAPFDAIYLSTYVPE--------------------------IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~~~--------------------------~~~~~~~~L~~gG~lv~~ 120 (216)
..+.+|+++.+..... +.+.+...++++|.++..
T Consensus 119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 0146899987754310 124555677788887764
No 420
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=90.82 E-value=2.9 Score=31.88 Aligned_cols=99 Identities=16% Similarity=0.076 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHM-REQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.++++|-.|++. .++..+++.+ ..+++|+.++.. .+..+...+.+...+ .++.++.+|..+...
T Consensus 30 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 102 (271)
T 3v2g_A 30 AGKTAFVTGGSR-GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG------GRAVAIRADNRDAEAIEQAIRE 102 (271)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 567888888765 4444444433 125688888544 455555555555433 568888888753210
Q ss_pred ---CCCCccEEEecCCCCc-------------------------hHHHHHhcCCCCeEEEEee
Q psy14962 87 ---HQAPFDAIYLSTYVPE-------------------------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~~~-------------------------~~~~~~~~L~~gG~lv~~~ 121 (216)
..+..|+++.+..... +.+.+...++++|.++...
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 0146899998766411 1245556777888877653
No 421
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.81 E-value=2.3 Score=32.32 Aligned_cols=99 Identities=19% Similarity=0.149 Sum_probs=59.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEH-MREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.++++|-.|++. .++..+++.+. .+++|+.++. +++..+...+.+...+ .++.++.+|+.+...
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~ 89 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG------SDAIAIKADIRQVPEIVKLFDQ 89 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHH
Confidence 466778777654 44444444331 2568888765 4555555555555433 578888999763221
Q ss_pred ---CCCCccEEEecCCCCc-------------------------hHHHHHhcCCCCeEEEEee
Q psy14962 87 ---HQAPFDAIYLSTYVPE-------------------------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~~~-------------------------~~~~~~~~L~~gG~lv~~~ 121 (216)
..+..|+++.+..... +.+.+...++++|.++...
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 0146899998766411 1245567778888877654
No 422
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.77 E-value=0.81 Score=31.62 Aligned_cols=98 Identities=9% Similarity=0.034 Sum_probs=57.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCC-HHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC----CCCC
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHM-REQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----HQAP 90 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~ 90 (216)
..+|+-+|+ |..+..+++.+. .+..|+.+|.+ ++..+...+.. ...+.++.+|...... .-..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---------~~~~~~i~gd~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---------GDNADVIPGDSNDSSVLKKAGIDR 71 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---------CTTCEEEESCTTSHHHHHHHTTTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---------cCCCeEEEcCCCCHHHHHHcChhh
Confidence 457888886 455555544331 24589999997 45443333321 1347788888753210 1246
Q ss_pred ccEEEecCCCCc---hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 91 FDAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 91 ~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+|+|++...... ......+.+.|...++.....+.
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~ 109 (153)
T 1id1_A 72 CRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSK 109 (153)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGG
T ss_pred CCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCHH
Confidence 899988766543 22344556667777777665553
No 423
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=90.74 E-value=0.6 Score=38.62 Aligned_cols=88 Identities=11% Similarity=-0.089 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 15 QEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
-.|.+|.-+|.|. |......++.+ +.+|+++|.++.....+.. ....+. +.... -...|+
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~--Ga~Viv~D~~p~~a~~A~~------------~G~~~~--sL~ea---l~~ADV 269 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGF--GARVVVTEVDPINALQAAM------------EGYQVL--LVEDV---VEEAHI 269 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH------------TTCEEC--CHHHH---TTTCSE
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCChhhhHHHHH------------hCCeec--CHHHH---HhhCCE
Confidence 3588999999988 66666666665 4599999999865544432 112221 22111 124799
Q ss_pred EEecCCCCchH-HHHHhcCCCCeEEEEee
Q psy14962 94 IYLSTYVPEIP-YSILLQLKPGGRLVCGV 121 (216)
Q Consensus 94 i~~~~~~~~~~-~~~~~~L~~gG~lv~~~ 121 (216)
|+....-..++ ....+.+|+|++++-.-
T Consensus 270 Vilt~gt~~iI~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 270 FVTTTGNDDIITSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp EEECSSCSCSBCTTTGGGCCTTEEEEECS
T ss_pred EEECCCCcCccCHHHHhhcCCCcEEEEeC
Confidence 98766555544 46677889988776543
No 424
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.69 E-value=0.32 Score=40.85 Aligned_cols=55 Identities=22% Similarity=0.191 Sum_probs=37.9
Q ss_pred CeEEEEcCCCchHHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVGKTG-RVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
-+++|+.||.|.++..+.+. +. -|.++|+++...+.-+.+... .....++..|+.
T Consensus 89 ~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~~-------~p~~~~~~~DI~ 144 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHYC-------DPATHHFNEDIR 144 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSCC-------CTTTCEEESCTH
T ss_pred ceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhccc-------CCCcceeccchh
Confidence 57999999999999888765 33 478899999876655544311 123346667764
No 425
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=90.61 E-value=2.1 Score=33.15 Aligned_cols=99 Identities=13% Similarity=0.014 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCC--HHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHM--REQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------ 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------ 86 (216)
.++++|-.|++ |.++..+++.+. .+++|+.++.+ +...+...+.....+ .++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG------RKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT------CCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC------CcEEEEEecCCCHHHHHHHHH
Confidence 35678888765 445555544432 25689998876 334444444444432 568888888753210
Q ss_pred ----CCCCccEEEecCCCCc--------------------------hHHHHHhcCCCCeEEEEee
Q psy14962 87 ----HQAPFDAIYLSTYVPE--------------------------IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 87 ----~~~~~D~i~~~~~~~~--------------------------~~~~~~~~L~~gG~lv~~~ 121 (216)
..+.+|+++.+..... +.+.+...++++|.++...
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 0146899988766411 1145556778888877653
No 426
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.56 E-value=2.4 Score=33.29 Aligned_cols=88 Identities=18% Similarity=0.157 Sum_probs=51.5
Q ss_pred CeEEEEcCCC-ch-HHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 18 AKVLDIGSGS-GF-MSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 18 ~~vldiG~G~-G~-~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
.+|.-||+|. |. ++..+.+. +....|++.|.+++.++.+.+. | -+.-...|..... -...|+|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~~----G-------~~~~~~~~~~~~~--~~~aDvVi 99 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDL----G-------IIDEGTTSIAKVE--DFSPDFVM 99 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHT----T-------SCSEEESCTTGGG--GGCCSEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHC----C-------CcchhcCCHHHHh--hccCCEEE
Confidence 5899999876 43 33333333 2112899999999887766432 2 1111222322101 13479999
Q ss_pred ecCCCCc---hHHHHHhcCCCCeEEEE
Q psy14962 96 LSTYVPE---IPYSILLQLKPGGRLVC 119 (216)
Q Consensus 96 ~~~~~~~---~~~~~~~~L~~gG~lv~ 119 (216)
..-+... ++..+...++++..++-
T Consensus 100 lavp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 100 LSSPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp ECSCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EeCCHHHHHHHHHHHhhccCCCcEEEE
Confidence 8877654 44667778888876644
No 427
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=90.47 E-value=0.052 Score=48.59 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=58.9
Q ss_pred cCCCCCeEEEEcC-CC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec---cCCC---C
Q psy14962 13 KIQEGAKVLDIGS-GS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR---DGRT---G 84 (216)
Q Consensus 13 ~~~~~~~vldiG~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---d~~~---~ 84 (216)
.+++|++||-.|+ |. |..++.+++..+ ++|++++.+++ .+..+ .+ ... ++.. |+.. .
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~G--a~V~~t~~~~k-~~~l~-----lg-----a~~--v~~~~~~~~~~~i~~ 406 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHLG--AEVYATASEDK-WQAVE-----LS-----REH--LASSRTCDFEQQFLG 406 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHTT--CCEEEECCGGG-GGGSC-----SC-----GGG--EECSSSSTHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHcC--CEEEEEeChHH-hhhhh-----cC-----hhh--eeecCChhHHHHHHH
Confidence 4678999999995 55 899999999864 58999885442 11111 11 111 1111 1100 0
Q ss_pred CCCCCCccEEEecCCCCchHHHHHhcCCCCeEEEEee
Q psy14962 85 LLHQAPFDAIYLSTYVPEIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 85 ~~~~~~~D~i~~~~~~~~~~~~~~~~L~~gG~lv~~~ 121 (216)
......+|+|+-...- ..+....++|+++|+++..-
T Consensus 407 ~t~g~GvDvVld~~gg-~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 407 ATGGRGVDVVLNSLAG-EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp HSCSSCCSEEEECCCT-TTTHHHHTSCTTCEEEEECC
T ss_pred HcCCCCeEEEEECCCc-HHHHHHHHHhcCCCEEEEec
Confidence 1123469999986654 45588899999999998853
No 428
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.20 E-value=0.18 Score=34.77 Aligned_cols=89 Identities=17% Similarity=0.107 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.+.+|+-+|+| .++..+++.+. .+.+|+..|.+++..+...+.+ + ......+-.... -..+|+|
T Consensus 20 ~~~~v~iiG~G--~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~---~--------~~~~~~~~~~~~--~~~~Div 84 (144)
T 3oj0_A 20 GGNKILLVGNG--MLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY---E--------YEYVLINDIDSL--IKNNDVI 84 (144)
T ss_dssp CCCEEEEECCS--HHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH---T--------CEEEECSCHHHH--HHTCSEE
T ss_pred cCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh---C--------CceEeecCHHHH--hcCCCEE
Confidence 48899999985 45544544432 2346889999988665433322 1 222221110000 1347999
Q ss_pred EecCCCCchHHHHHhcCCCCeEEEEe
Q psy14962 95 YLSTYVPEIPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 95 ~~~~~~~~~~~~~~~~L~~gG~lv~~ 120 (216)
+...+..+..-. ...+++|+.++-.
T Consensus 85 i~at~~~~~~~~-~~~l~~g~~vid~ 109 (144)
T 3oj0_A 85 ITATSSKTPIVE-ERSLMPGKLFIDL 109 (144)
T ss_dssp EECSCCSSCSBC-GGGCCTTCEEEEC
T ss_pred EEeCCCCCcEee-HHHcCCCCEEEEc
Confidence 987776542211 2677887766543
No 429
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.01 E-value=0.19 Score=39.87 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=39.1
Q ss_pred CCeEEEeccCCCC--CCCCCCccEEEecCCCCc--------------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 72 GRLHLRCRDGRTG--LLHQAPFDAIYLSTYVPE--------------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 72 ~~~~~~~~d~~~~--~~~~~~~D~i~~~~~~~~--------------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.+..++++|.... ..++++||+|+++.|... .+..+.++|+|||.+++.+...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 4577888887532 234578999999988621 2467789999999999976654
No 430
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.59 E-value=2.9 Score=32.33 Aligned_cols=78 Identities=14% Similarity=-0.033 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.++++|-.|++. ..++..+++.+. .+++|+.++.++...+.+.+..... .++.++.+|+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-------GVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-------TCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-------CCeEEEEcCCCCHHHHHHHHHH
Confidence 467889888764 344444444331 2569999999876655555544442 346788888753211
Q ss_pred ---CCCCccEEEecCCC
Q psy14962 87 ---HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 102 ~~~~~g~iD~lVnnAG~ 118 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAF 118 (296)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 01468999987764
No 431
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.39 E-value=0.48 Score=39.12 Aligned_cols=47 Identities=17% Similarity=0.185 Sum_probs=36.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHhC---C-CcEEEEEeCCHHHHHHHHHHHHH
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVG---K-TGRVFGVEHMREQCEDAWETVMR 63 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~---~-~~~v~~~D~~~~~~~~a~~~~~~ 63 (216)
...|+|+|+|+|.++..+++.+. + ..+++.+|+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 36899999999999888775542 1 13799999999988877777764
No 432
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=89.27 E-value=1.6 Score=33.71 Aligned_cols=80 Identities=10% Similarity=-0.022 Sum_probs=53.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC-CC-------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG-LL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~------- 86 (216)
.+++||-.|++ |.++..+++.+ ..+++|+.++.++...+.+.+.+...+ ..++.++.+|+... ..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-----HENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-----CCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEEccCCCcHHHHHHHHHH
Confidence 46677777765 45555555443 235699999999988777776665532 35788999998654 10
Q ss_pred ---CCCCccEEEecCCCC
Q psy14962 87 ---HQAPFDAIYLSTYVP 101 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~~ 101 (216)
..+.+|+++.+.+..
T Consensus 85 ~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 85 IKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHSSCCEEEECCCCC
T ss_pred HHHhCCCCCEEEECCccc
Confidence 014789999988753
No 433
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.20 E-value=1.4 Score=36.98 Aligned_cols=87 Identities=15% Similarity=0.004 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 15 QEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
-.|++|+-+|+|. |......++.. +++|+.+|.++.....+... ...+ .+... ....+|+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~--GA~Viv~D~~~~~a~~Aa~~------------g~dv--~~lee---~~~~aDv 323 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQA--GARVIVTEIDPICALQATME------------GLQV--LTLED---VVSEADI 323 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------TCEE--CCGGG---TTTTCSE
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------------CCcc--CCHHH---HHHhcCE
Confidence 3689999999984 33333333333 56999999998765544321 1222 22111 1235798
Q ss_pred EEecCCCCchH-HHHHhcCCCCeEEEEe
Q psy14962 94 IYLSTYVPEIP-YSILLQLKPGGRLVCG 120 (216)
Q Consensus 94 i~~~~~~~~~~-~~~~~~L~~gG~lv~~ 120 (216)
++.......++ ....+.+++++.++-.
T Consensus 324 Vi~atG~~~vl~~e~l~~mk~gaiVvNa 351 (488)
T 3ond_A 324 FVTTTGNKDIIMLDHMKKMKNNAIVCNI 351 (488)
T ss_dssp EEECSSCSCSBCHHHHTTSCTTEEEEES
T ss_pred EEeCCCChhhhhHHHHHhcCCCeEEEEc
Confidence 88776655544 4577889999877654
No 434
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.07 E-value=0.73 Score=35.24 Aligned_cols=78 Identities=19% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--------- 85 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 85 (216)
.|+++|--|++.| ++..+++.+ ..+++|+.+|.+++.++.+.+.+.+.+ .++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g------~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG------YDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT------CCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEeeCCCHHHHHHHHHHH
Confidence 4777777776654 444444433 236799999999998888777776644 56788888875321
Q ss_pred -CCCCCccEEEecCCC
Q psy14962 86 -LHQAPFDAIYLSTYV 100 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~ 100 (216)
...++.|+++.+...
T Consensus 81 ~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 81 DAEGIHVDILINNAGI 96 (255)
T ss_dssp HHTTCCCCEEEECCCC
T ss_pred HHHCCCCcEEEECCCC
Confidence 123678999988764
No 435
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.06 E-value=2.5 Score=31.04 Aligned_cols=94 Identities=19% Similarity=0.146 Sum_probs=57.5
Q ss_pred eEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC----CCCCccE
Q psy14962 19 KVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----HQAPFDA 93 (216)
Q Consensus 19 ~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~ 93 (216)
+|+-+|+ |.++..+++.+. .+..|+.+|.+++.++...+. ....++.+|...... .-..+|+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-----------~~~~~i~gd~~~~~~l~~a~i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-----------LKATIIHGDGSHKEILRDAEVSKNDV 68 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-----------SSSEEEESCTTSHHHHHHHTCCTTCE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----------cCCeEEEcCCCCHHHHHhcCcccCCE
Confidence 4677776 555555554431 245899999999877654332 246788888763210 1246899
Q ss_pred EEecCCCCc---hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 94 IYLSTYVPE---IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 94 i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
|++..+... ....+.+.+.+...++.....+.
T Consensus 69 vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~~ 103 (218)
T 3l4b_C 69 VVILTPRDEVNLFIAQLVMKDFGVKRVVSLVNDPG 103 (218)
T ss_dssp EEECCSCHHHHHHHHHHHHHTSCCCEEEECCCSGG
T ss_pred EEEecCCcHHHHHHHHHHHHHcCCCeEEEEEeCcc
Confidence 988766543 23444455667777777665553
No 436
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=88.86 E-value=1.5 Score=33.63 Aligned_cols=79 Identities=11% Similarity=0.027 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
..++++|-.|++. .++..+++.+ ..+++|+.++.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 22 ~~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 94 (279)
T 3sju_A 22 SRPQTAFVTGVSS-GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG------HDVDGSSCDVTSTDEVHAAVAA 94 (279)
T ss_dssp ---CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHH
Confidence 3567788888655 4444444433 125699999999988877776665533 568888899763210
Q ss_pred ---CCCCccEEEecCCC
Q psy14962 87 ---HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 95 ~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 95 AVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHCSCCEEEECCCC
T ss_pred HHHHcCCCcEEEECCCC
Confidence 01468999987764
No 437
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.82 E-value=1.1 Score=36.03 Aligned_cols=68 Identities=16% Similarity=-0.046 Sum_probs=44.3
Q ss_pred CeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-C--CCCccEE
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-H--QAPFDAI 94 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~--~~~~D~i 94 (216)
.+|+-+|| |..+..+++.+.....|+..|.+.+.++.++ ..+..+..|+.+... . -..+|+|
T Consensus 17 mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~-------------~~~~~~~~d~~d~~~l~~~~~~~DvV 81 (365)
T 3abi_A 17 MKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVK-------------EFATPLKVDASNFDKLVEVMKEFELV 81 (365)
T ss_dssp CEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHT-------------TTSEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHh-------------ccCCcEEEecCCHHHHHHHHhCCCEE
Confidence 47999998 5666666666655668999999988776553 234555666542110 0 1457999
Q ss_pred EecCCC
Q psy14962 95 YLSTYV 100 (216)
Q Consensus 95 ~~~~~~ 100 (216)
++..+.
T Consensus 82 i~~~p~ 87 (365)
T 3abi_A 82 IGALPG 87 (365)
T ss_dssp EECCCG
T ss_pred EEecCC
Confidence 887664
No 438
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=88.06 E-value=1.6 Score=33.64 Aligned_cols=78 Identities=15% Similarity=0.101 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.++|-.|++. .++..+++.+ ..+++|+.++.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 27 PSPVALITGAGS-GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG------GQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHH
Confidence 466788777655 4444444433 135699999999988777666654432 568888899763210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 01478999987664
No 439
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=88.01 E-value=2.8 Score=31.82 Aligned_cols=79 Identities=11% Similarity=0.024 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH------- 87 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------- 87 (216)
.++++|-.|++. .++..+++.+. .+++|+.++.+++.++.+.+.+.... ..++.++..|+.+...-
T Consensus 19 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 19 DGKRALITGATK-GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-----GTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----CCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 466777777654 45544544432 25699999999988877666654411 25788999998643210
Q ss_pred ---CCCccEEEecCCC
Q psy14962 88 ---QAPFDAIYLSTYV 100 (216)
Q Consensus 88 ---~~~~D~i~~~~~~ 100 (216)
.+..|+++.+...
T Consensus 93 ~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHHTSCSEEEEECCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 1478999987664
No 440
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=87.84 E-value=2.3 Score=32.44 Aligned_cols=78 Identities=12% Similarity=0.054 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.++|-.|++ |.++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++..|+.+...
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------LNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHHH
Confidence 46678887764 555555544432 25699999999887766655554432 467888888753210
Q ss_pred --CC-CCccEEEecCCC
Q psy14962 87 --HQ-APFDAIYLSTYV 100 (216)
Q Consensus 87 --~~-~~~D~i~~~~~~ 100 (216)
.. +.+|+++.+...
T Consensus 93 ~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHTTSCCCEEEECCCC
T ss_pred HHHcCCCCcEEEECCCC
Confidence 01 568999987664
No 441
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.84 E-value=2.8 Score=31.71 Aligned_cols=78 Identities=8% Similarity=-0.030 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCH---HHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-----
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMR---EQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL----- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----- 86 (216)
.++++|-.|++ |.++..+++.+. .+++|+.++.+. +.++...+.+... ..++.++..|+.+...
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~ 82 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ------GAKVALYQSDLSNEEEVAKLF 82 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT------TCEEEEEECCCCSHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc------CCcEEEEECCCCCHHHHHHHH
Confidence 46678877765 456666666553 356898886543 3444444444432 2568888889763221
Q ss_pred -----CCCCccEEEecCCC
Q psy14962 87 -----HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 -----~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 83 ~~~~~~~g~iD~lvnnAg~ 101 (262)
T 3ksu_A 83 DFAEKEFGKVDIAINTVGK 101 (262)
T ss_dssp HHHHHHHCSEEEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 01478999987764
No 442
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.72 E-value=0.36 Score=36.75 Aligned_cols=81 Identities=20% Similarity=0.190 Sum_probs=45.1
Q ss_pred CCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCH-------------------HHHHHHHHHHHHhCCCCCCCCCeEE
Q psy14962 17 GAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMR-------------------EQCEDAWETVMRIRPDLLNDGRLHL 76 (216)
Q Consensus 17 ~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~-------------------~~~~~a~~~~~~~~~~~~~~~~~~~ 76 (216)
+.+|+-+|||. |......+...|. .+++.+|.+. .-.+.+.+.+...+. ..++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np----~~~v~~ 105 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP----HIAITP 105 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT----TSEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC----CcEEEE
Confidence 57899999986 5544333333332 4899999886 556666666665431 112333
Q ss_pred EeccCCCCCCC--CCCccEEEecCCCCc
Q psy14962 77 RCRDGRTGLLH--QAPFDAIYLSTYVPE 102 (216)
Q Consensus 77 ~~~d~~~~~~~--~~~~D~i~~~~~~~~ 102 (216)
+..+....... -..+|+|+.......
T Consensus 106 ~~~~~~~~~~~~~~~~~DvVi~~~d~~~ 133 (249)
T 1jw9_B 106 VNALLDDAELAALIAEHDLVLDCTDNVA 133 (249)
T ss_dssp ECSCCCHHHHHHHHHTSSEEEECCSSHH
T ss_pred EeccCCHhHHHHHHhCCCEEEEeCCCHH
Confidence 33333211000 135899998765433
No 443
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=87.19 E-value=2.4 Score=31.98 Aligned_cols=78 Identities=12% Similarity=0.077 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.++|-.|++ |.++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------FKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHH
Confidence 46778877764 555555544431 25699999999887766555554422 467888888753210
Q ss_pred --CC-CCccEEEecCCC
Q psy14962 87 --HQ-APFDAIYLSTYV 100 (216)
Q Consensus 87 --~~-~~~D~i~~~~~~ 100 (216)
.. +.+|+++.+...
T Consensus 81 ~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHTTTCCCEEEECCCC
T ss_pred HHHcCCCCCEEEECCCC
Confidence 01 568999987663
No 444
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=86.95 E-value=3 Score=31.77 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHM------------REQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
.++++|-.|++. .++..+++.+ ..+++|+.+|.+ ++.++...+.+...+ .++.++.+|+.
T Consensus 12 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~~ 84 (278)
T 3sx2_A 12 TGKVAFITGAAR-GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG------SRIVARQADVR 84 (278)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT------CCEEEEECCTT
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC------CeEEEEeCCCC
Confidence 467788888654 4444444433 125699999976 666665555555443 57889999976
Q ss_pred CCCC----------CCCCccEEEecCCC
Q psy14962 83 TGLL----------HQAPFDAIYLSTYV 100 (216)
Q Consensus 83 ~~~~----------~~~~~D~i~~~~~~ 100 (216)
+... ..+..|+++.+...
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3221 01478999987765
No 445
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=86.70 E-value=4.2 Score=31.11 Aligned_cols=78 Identities=9% Similarity=-0.055 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeC-CHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCC------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEH-MREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLH------ 87 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------ 87 (216)
.++++|-.|++. .++..+++.+ ..+++|+.++. +++.++...+.+...+ .++.++.+|+.+...-
T Consensus 28 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 28 ARPVAIVTGGRR-GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG------ARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT------CCEEEEECCTTSGGGHHHHHHH
T ss_pred CCCEEEEecCCC-HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHH
Confidence 456778777655 4444444433 12569999985 6766666655555533 5788899998643210
Q ss_pred ----CCCccEEEecCCC
Q psy14962 88 ----QAPFDAIYLSTYV 100 (216)
Q Consensus 88 ----~~~~D~i~~~~~~ 100 (216)
.+..|+++.+...
T Consensus 101 ~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHHSCCCEEEEECC-
T ss_pred HHHHcCCCCEEEECCCc
Confidence 1468999987764
No 446
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=86.59 E-value=2.6 Score=32.07 Aligned_cols=78 Identities=10% Similarity=0.027 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEE-eCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGV-EHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~-D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.++++|-.|++.| ++..+++.+. .+++|+.+ ..+++..+...+.+...+ .++.++.+|+.+...
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG------GKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHHHHHHH
Confidence 4677888887654 3333333321 15588877 445555555555555433 568888888763211
Q ss_pred ---CCCCccEEEecCCC
Q psy14962 87 ---HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 99 ~~~~~g~iD~lvnnAG~ 115 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGI 115 (267)
T ss_dssp HHHHHSCEEEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 01478999987764
No 447
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=86.57 E-value=2.9 Score=32.35 Aligned_cols=78 Identities=13% Similarity=0.133 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHM------------REQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
.++++|-.|++.| ++..+++.+ ..+++|+.+|.+ ++.++...+.+...+ .++.++..|+.
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~ 99 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG------RRIIASQVDVR 99 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT------CCEEEEECCTT
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC------CceEEEECCCC
Confidence 4667888887654 444444333 225699999987 566665555555433 57888999976
Q ss_pred CCCC----------CCCCccEEEecCCC
Q psy14962 83 TGLL----------HQAPFDAIYLSTYV 100 (216)
Q Consensus 83 ~~~~----------~~~~~D~i~~~~~~ 100 (216)
+... ..+..|+++.+...
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 3221 01468999877653
No 448
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=86.51 E-value=4.1 Score=30.26 Aligned_cols=79 Identities=8% Similarity=0.063 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++.++...+.+...+ ..++.++..|......
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-----QPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-----CCCceEEEeccccCCHHHHHHHHH
Confidence 46677777765 555555554432 25699999999998888777776633 2466777777632111
Q ss_pred ----CCCCccEEEecCCC
Q psy14962 87 ----HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ----~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 87 ~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHhCCCCCEEEECCcc
Confidence 01468999987664
No 449
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=86.46 E-value=5.4 Score=30.41 Aligned_cols=77 Identities=12% Similarity=-0.012 Sum_probs=45.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHH-HHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMRE-QCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
++++|-.|+ +|.++..+++.+. .+.+|+.++.++. ..+...+.+...+ .++.++..|+.....
T Consensus 29 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 29 GKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG------SDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC------CCeEEEEcCCCCHHHHHHHHHHH
Confidence 556776665 4555555555432 2568999987754 3344334444322 467888888753210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 102 ~~~~g~iD~lv~~Ag~ 117 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGV 117 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 01468999887664
No 450
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.40 E-value=4.5 Score=30.30 Aligned_cols=79 Identities=10% Similarity=-0.021 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccC--CCCC-------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDG--RTGL------- 85 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~--~~~~------- 85 (216)
.++++|-.|++. .++..+++.+ ..+++|+.++.+++.++...+.+...+ ..++.++..|. ....
T Consensus 11 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 11 NDRIILVTGASD-GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-----GRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-----CCCceEEEEecccCCHHHHHHHHH
Confidence 467788888654 4444444433 125699999999988777766655432 24678888887 2211
Q ss_pred ---CCCCCccEEEecCCC
Q psy14962 86 ---LHQAPFDAIYLSTYV 100 (216)
Q Consensus 86 ---~~~~~~D~i~~~~~~ 100 (216)
...+..|+++.+...
T Consensus 85 ~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHCSCCSEEEECCCC
T ss_pred HHHHhCCCCCEEEECCcc
Confidence 011468999987664
No 451
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=86.04 E-value=2.1 Score=32.83 Aligned_cols=78 Identities=17% Similarity=0.122 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++ |.++..+++.+ ..+++|+.++.+++..+...+.+...+ .++.++..|..+...
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG------GTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT------CCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------CeEEEEEecCCCHHHHHHHHHHH
Confidence 46677777755 45555554443 225699999998887776666665533 578889999764321
Q ss_pred -CCCCccEEEecCCC
Q psy14962 87 -HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 -~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 105 ~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 105 EAIAPVDILVINASA 119 (275)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 01468999987764
No 452
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=86.03 E-value=2.9 Score=35.07 Aligned_cols=87 Identities=16% Similarity=-0.022 Sum_probs=54.5
Q ss_pred CCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 15 QEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
-.|.+|.-+|.|. |......++.+ +.+|++.|.++.....+. . ..+.+ .+.... -...|+
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~--G~~Viv~d~~~~~~~~a~----~--------~g~~~--~~l~el---l~~aDi 315 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAV----M--------EGFNV--VTLDEI---VDKGDF 315 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHH----T--------TTCEE--CCHHHH---TTTCSE
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC--cCEEEEEeCChhhHHHHH----H--------cCCEe--cCHHHH---HhcCCE
Confidence 3688999999877 65555555555 459999999987542222 1 11222 121111 134799
Q ss_pred EEecCCCCchH-HHHHhcCCCCeEEEEe
Q psy14962 94 IYLSTYVPEIP-YSILLQLKPGGRLVCG 120 (216)
Q Consensus 94 i~~~~~~~~~~-~~~~~~L~~gG~lv~~ 120 (216)
|+.......++ ....+.+|||++++=.
T Consensus 316 Vi~~~~t~~lI~~~~l~~MK~gailiNv 343 (479)
T 1v8b_A 316 FITCTGNVDVIKLEHLLKMKNNAVVGNI 343 (479)
T ss_dssp EEECCSSSSSBCHHHHTTCCTTCEEEEC
T ss_pred EEECCChhhhcCHHHHhhcCCCcEEEEe
Confidence 99886555544 5677889998877654
No 453
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=86.03 E-value=3 Score=31.91 Aligned_cols=78 Identities=17% Similarity=0.124 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCC----------------HHHHHHHHHHHHHhCCCCCCCCCeEEEe
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHM----------------REQCEDAWETVMRIRPDLLNDGRLHLRC 78 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~----------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 78 (216)
.++++|-.|++.| ++..+++.+ ..+++|+.+|.+ ++.++...+.+...+ .++.++.
T Consensus 10 ~~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 82 (286)
T 3uve_A 10 EGKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN------RRIVTAE 82 (286)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT------CCEEEEE
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC------CceEEEE
Confidence 4678888887664 444444333 125699999887 566655555554432 5788888
Q ss_pred ccCCCCCC----------CCCCccEEEecCCC
Q psy14962 79 RDGRTGLL----------HQAPFDAIYLSTYV 100 (216)
Q Consensus 79 ~d~~~~~~----------~~~~~D~i~~~~~~ 100 (216)
.|+.+... ..+..|+++.+...
T Consensus 83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 99763210 01468999987664
No 454
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.87 E-value=5.8 Score=29.90 Aligned_cols=78 Identities=14% Similarity=0.085 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++.| ++..+++.+ ..+++|+.++.+++.++...+.+...+ .++.++..|+.+...
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG------RRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHH
Confidence 4778888887664 333333332 125699999999988887777666543 578889999763221
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 83 ~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 83 MKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHTSCCSEEEECCCS
T ss_pred HHHcCCCcEEEECCCC
Confidence 12478999987643
No 455
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=85.84 E-value=1.3 Score=40.60 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHhCCCc--EEEEEeCCHHHHHHHHHH
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVGKTG--RVFGVEHMREQCEDAWET 60 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~~~~--~v~~~D~~~~~~~~a~~~ 60 (216)
..+++|+.||.|.++.-+.+. +. -+.++|+++...+.-+.+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A---G~~~vv~avEid~~A~~ty~~N 582 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA---GISDTLWAIEMWDPAAQAFRLN 582 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH---TSEEEEEEECSSHHHHHHHHHH
T ss_pred CCeEEEeccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHh
Confidence 357999999999999888766 33 577999999877655544
No 456
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.83 E-value=4.6 Score=30.11 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+++||-.|++. .++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG------GTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC------CcEEEEEccCCCHHHHHHHHHHH
Confidence 467888888654 44544444431 25699999999988887777665533 568888888763210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 01468999987764
No 457
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.39 E-value=6.2 Score=29.86 Aligned_cols=67 Identities=16% Similarity=0.212 Sum_probs=47.4
Q ss_pred CeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEEe
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIYL 96 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 96 (216)
.+||-.|+ |.++..+++.+. .+.+|++++.++....... . .++.++.+|..+.. ...+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--------~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A--------SGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H--------TTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h--------CCCeEEEecccccc--cCCCCEEEE
Confidence 58999994 888888877652 2469999998876543322 2 45888999987533 456899987
Q ss_pred cCCC
Q psy14962 97 STYV 100 (216)
Q Consensus 97 ~~~~ 100 (216)
....
T Consensus 70 ~a~~ 73 (286)
T 3ius_A 70 STAP 73 (286)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 7654
No 458
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.30 E-value=5.8 Score=30.38 Aligned_cols=86 Identities=15% Similarity=0.024 Sum_probs=49.1
Q ss_pred CeEEEEcCCC-chH-HHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEE
Q psy14962 18 AKVLDIGSGS-GFM-SCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIY 95 (216)
Q Consensus 18 ~~vldiG~G~-G~~-~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 95 (216)
.+|.-||+|. |.. +..+++. +.+.+|++.|.+++.++.+.+ .+ .......|.... -...|+|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~----~g-------~~~~~~~~~~~~---~~~aDvVi 71 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-HPHYKIVGYNRSDRSRDIALE----RG-------IVDEATADFKVF---AALADVII 71 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSSHHHHHHHHH----TT-------SCSEEESCTTTT---GGGCSEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-CCCcEEEEEcCCHHHHHHHHH----cC-------CcccccCCHHHh---hcCCCEEE
Confidence 4788999887 443 3333333 324589999999887765543 12 111112232211 13479999
Q ss_pred ecCCCCc---hHHHHHhc-CCCCeEEE
Q psy14962 96 LSTYVPE---IPYSILLQ-LKPGGRLV 118 (216)
Q Consensus 96 ~~~~~~~---~~~~~~~~-L~~gG~lv 118 (216)
..-+... ++..+... ++++..++
T Consensus 72 lavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred EcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 8877544 44555566 77776555
No 459
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.29 E-value=5.2 Score=30.93 Aligned_cols=78 Identities=15% Similarity=0.071 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-----C--
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-----H-- 87 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~-- 87 (216)
.+.+||-.|++.| ++..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++..|+.+... .
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG------FDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEccCCCHHHHHHHHHHH
Confidence 4678888887654 444444433 125699999999998887777766533 578889999763221 0
Q ss_pred ---CCCccEEEecCCC
Q psy14962 88 ---QAPFDAIYLSTYV 100 (216)
Q Consensus 88 ---~~~~D~i~~~~~~ 100 (216)
.+.+|+++.+...
T Consensus 103 ~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHhCCCCCEEEECCCc
Confidence 1468999988764
No 460
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.10 E-value=5.1 Score=30.54 Aligned_cols=87 Identities=18% Similarity=0.122 Sum_probs=48.8
Q ss_pred eEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCC-CccEEEe
Q psy14962 19 KVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQA-PFDAIYL 96 (216)
Q Consensus 19 ~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~D~i~~ 96 (216)
+|.-||+|. |......+...+...+|++.|.+++.++.+.+ .+. . .. ...|.... -. ..|+|+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~-----~-~~-~~~~~~~~---~~~~aDvVil 68 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGI-----I-DE-GTTSIAKV---EDFSPDFVML 68 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTS-----C-SE-EESCGGGG---GGTCCSEEEE
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CCC-----c-cc-ccCCHHHH---hcCCCCEEEE
Confidence 688898877 44333333332211279999999987765542 221 1 11 11222111 12 5799998
Q ss_pred cCCCCc---hHHHHHhcCCCCeEEEE
Q psy14962 97 STYVPE---IPYSILLQLKPGGRLVC 119 (216)
Q Consensus 97 ~~~~~~---~~~~~~~~L~~gG~lv~ 119 (216)
.-+... ++..+...++++..++.
T Consensus 69 avp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 69 SSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 877544 34556677888876554
No 461
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=85.03 E-value=3.3 Score=31.16 Aligned_cols=78 Identities=21% Similarity=0.211 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.++|-.|++.| ++..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++.+|+.+...
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG------GRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEECcCCCHHHHHHHHHHH
Confidence 4677888887654 444444433 125699999999988877777666533 578889999753210
Q ss_pred -CCCCccEEEecCCC
Q psy14962 87 -HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 -~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 79 ~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHSCEEEEEECCCC
T ss_pred HhhCCceEEEECCCc
Confidence 00468999987764
No 462
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.94 E-value=6.8 Score=28.89 Aligned_cols=94 Identities=6% Similarity=-0.100 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC----CCCCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVGK-TGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL----LHQAP 90 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~ 90 (216)
...+|+-+|+ |..+..+++.+.. +. |+++|.+++.++.+. . .+.++.+|..... ..-..
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~---------~~~~i~gd~~~~~~l~~a~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR----S---------GANFVHGDPTRVSDLEKANVRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----T---------TCEEEESCTTCHHHHHHTTCTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----c---------CCeEEEcCCCCHHHHHhcCcch
Confidence 4568999987 5677777776543 34 999999988765543 1 2678888875321 11246
Q ss_pred ccEEEecCCCCc---hHHHHHhcCCCCeEEEEeecCCC
Q psy14962 91 FDAIYLSTYVPE---IPYSILLQLKPGGRLVCGVGKSK 125 (216)
Q Consensus 91 ~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~ 125 (216)
+|.|++..+-.. ......+.+.|+..++....++.
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~~ 109 (234)
T 2aef_A 72 ARAVIVDLESDSETIHCILGIRKIDESVRIIAEAERYE 109 (234)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEECSSGG
T ss_pred hcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECCHh
Confidence 798888766532 22345566778778877766654
No 463
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=84.87 E-value=2.4 Score=32.58 Aligned_cols=79 Identities=14% Similarity=-0.021 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++ |.++..+++.+. .+++|+.++.+++.++...+.+...+ ...+.++.+|+.+...
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-----GNIVRAVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 46677777755 555555554432 35699999999988777666655432 2345888889763221
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 106 ~~~~g~iD~lvnnAG~ 121 (281)
T 4dry_A 106 RAEFARLDLLVNNAGS 121 (281)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 01468999987664
No 464
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=84.75 E-value=6.9 Score=29.63 Aligned_cols=76 Identities=18% Similarity=0.219 Sum_probs=46.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-----CCCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-----LHQA 89 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 89 (216)
.|+++|--|++.| ++...++.+ ..+++|+..|.+.. +.+.+.+...+ .++..+..|+.+.. ...+
T Consensus 8 ~GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g------~~~~~~~~Dv~d~~~v~~~~~~g 78 (247)
T 4hp8_A 8 EGRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG------GNASALLIDFADPLAAKDSFTDA 78 (247)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT------CCEEEEECCTTSTTTTTTSSTTT
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC------CcEEEEEccCCCHHHHHHHHHhC
Confidence 4777777776665 333333332 13679999987753 23333444433 57888888876332 2346
Q ss_pred CccEEEecCCC
Q psy14962 90 PFDAIYLSTYV 100 (216)
Q Consensus 90 ~~D~i~~~~~~ 100 (216)
.+|+.+.+...
T Consensus 79 ~iDiLVNNAGi 89 (247)
T 4hp8_A 79 GFDILVNNAGI 89 (247)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999988764
No 465
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.20 E-value=4.7 Score=30.37 Aligned_cols=78 Identities=13% Similarity=0.058 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.+||-.|++ |.++..+++.+ ..+.+|+.++.+++.++...+.+...+ .++.++..|+.....
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG------GEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC------CceeEEEecCCCHHHHHHHHHHH
Confidence 45677777764 55555555443 235699999999988887777666533 568888888753211
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 01468999987664
No 466
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=83.86 E-value=5.9 Score=30.11 Aligned_cols=83 Identities=19% Similarity=0.138 Sum_probs=46.7
Q ss_pred eEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEEEec
Q psy14962 19 KVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAIYLS 97 (216)
Q Consensus 19 ~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 97 (216)
+|.-+|+|. |......+... +.+|+++|.+++.++.+.+ .+. . .. ...+... . ...|+|+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~----~g~-----~-~~-~~~~~~~---~-~~~D~vi~a 64 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVE----RQL-----V-DE-AGQDLSL---L-QTAKIIFLC 64 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTS-----C-SE-EESCGGG---G-TTCSEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCC-----C-cc-ccCCHHH---h-CCCCEEEEE
Confidence 577888876 43322222222 3489999999987765532 121 1 11 1222211 1 357999988
Q ss_pred CCCCc---hHHHHHhcCCCCeEEE
Q psy14962 98 TYVPE---IPYSILLQLKPGGRLV 118 (216)
Q Consensus 98 ~~~~~---~~~~~~~~L~~gG~lv 118 (216)
-+... ++..+...++++..++
T Consensus 65 v~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 65 TPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp SCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 77543 4456666787877554
No 467
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=83.78 E-value=3.7 Score=32.12 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCCCCeEEEeccCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHM------------REQCEDAWETVMRIRPDLLNDGRLHLRCRDGR 82 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (216)
.++++|-.|++. .++..+++.+ ..+++|+.+|.+ ++.++...+.+...+ .++.++.+|+.
T Consensus 45 ~gk~~lVTGas~-GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~ 117 (317)
T 3oec_A 45 QGKVAFITGAAR-GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG------RRIIARQADVR 117 (317)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT------CCEEEEECCTT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC------CeEEEEECCCC
Confidence 356777777654 4444444433 125699999876 555555555554433 57888889975
Q ss_pred CCCC----------CCCCccEEEecCCC
Q psy14962 83 TGLL----------HQAPFDAIYLSTYV 100 (216)
Q Consensus 83 ~~~~----------~~~~~D~i~~~~~~ 100 (216)
+... ..+.+|+++.+...
T Consensus 118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 118 DLASLQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3210 01478999987764
No 468
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=83.57 E-value=6.2 Score=26.19 Aligned_cols=92 Identities=12% Similarity=0.084 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC--C--CCCCc
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--L--HQAPF 91 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~--~~~~~ 91 (216)
+.+|+-+|+|. ++..+++.+. .+.+|+.+|.+++..+.++ . ....++.+|..... . ....+
T Consensus 6 ~~~v~I~G~G~--iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~--------~~~~~~~~d~~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 6 NKQFAVIGLGR--FGGSIVKELHRMGHEVLAVDINEEKVNAYA----S--------YATHAVIANATEENELLSLGIRNF 71 (144)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T--------TCSEEEECCTTCHHHHHTTTGGGC
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H--------hCCEEEEeCCCCHHHHHhcCCCCC
Confidence 56799999754 4444443321 2458999999886544322 1 12345666654211 0 12458
Q ss_pred cEEEecCCCC-c---hHHHHHhcCCCCeEEEEeecC
Q psy14962 92 DAIYLSTYVP-E---IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 92 D~i~~~~~~~-~---~~~~~~~~L~~gG~lv~~~~~ 123 (216)
|+|+...+.. . ......+.+.+. .++....+
T Consensus 72 d~vi~~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 72 EYVIVAIGANIQASTLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHTTCS-EEEEECCS
T ss_pred CEEEECCCCchHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence 9999877754 2 223334455665 55554433
No 469
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=83.46 E-value=3.6 Score=30.96 Aligned_cols=78 Identities=8% Similarity=-0.003 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC-----CC--
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL-----LH-- 87 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 87 (216)
.+.+||-.|+ +|.++..+++.+. .+.+|+.++.++..++...+.+...+ .++.++..|..... ..
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG------FQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeeEEEECCCCCHHHHHHHHHHH
Confidence 4567776665 5556655555432 25699999999877766555554422 46788888875321 00
Q ss_pred ----CCCccEEEecCCC
Q psy14962 88 ----QAPFDAIYLSTYV 100 (216)
Q Consensus 88 ----~~~~D~i~~~~~~ 100 (216)
.+.+|+++.+...
T Consensus 86 ~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 86 SSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHTTCCSEEEEECCC
T ss_pred HHHhCCCCcEEEECCCC
Confidence 1468999877653
No 470
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=83.34 E-value=6.6 Score=29.53 Aligned_cols=79 Identities=14% Similarity=0.139 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-CCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-------
Q psy14962 16 EGAKVLDIGS-GSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL------- 86 (216)
Q Consensus 16 ~~~~vldiG~-G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 86 (216)
.+.++|-.|+ |.|. +..+++.+ ..+.+|+.++.+++.++...+.+...+ ..++.++.+|+.+...
T Consensus 21 ~~k~vlITGasg~GI-G~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGI-GSTTARRALLEGADVVISDYHERRLGETRDQLADLG-----LGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-----SSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCch-HHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-----CCceEEEEeCCCCHHHHHHHHHH
Confidence 4678888887 4543 22232222 125699999999988877777665532 3578899999863211
Q ss_pred ---CCCCccEEEecCCC
Q psy14962 87 ---HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 ---~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 95 ~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCcEEEECCCc
Confidence 01468999987764
No 471
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=83.07 E-value=4.7 Score=30.21 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++.| ++..+++.+. .+++|+.++.+++.++...+.+.... ....++.++.+|+.+...
T Consensus 6 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 6 QKGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN---KHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC---TTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---cccCcceEEeccCCCHHHHHHHHHHH
Confidence 4677888887654 3333333321 15699999999988877776665532 012567888889763210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 82 ~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHCCEEEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 01468999987764
No 472
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=82.99 E-value=4.2 Score=34.23 Aligned_cols=87 Identities=10% Similarity=-0.077 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 15 QEGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 15 ~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
-.|.+|.-+|.|. |......++.+ +.+|++.|.++.....+. . ....+. +.... -...|+
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~--G~~V~v~d~~~~~~~~a~----~--------~G~~~~--~l~el---l~~aDi 335 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGL--GATVWVTEIDPICALQAA----M--------EGYRVV--TMEYA---ADKADI 335 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSCHHHHHHHH----T--------TTCEEC--CHHHH---TTTCSE
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCChHhHHHHH----H--------cCCEeC--CHHHH---HhcCCE
Confidence 3688999998776 55444444443 569999999987532221 1 112221 21111 134799
Q ss_pred EEecCCCCchH-HHHHhcCCCCeEEEEe
Q psy14962 94 IYLSTYVPEIP-YSILLQLKPGGRLVCG 120 (216)
Q Consensus 94 i~~~~~~~~~~-~~~~~~L~~gG~lv~~ 120 (216)
|+.......++ ....+.+|||++++=.
T Consensus 336 Vi~~~~t~~lI~~~~l~~MK~gAilINv 363 (494)
T 3d64_A 336 FVTATGNYHVINHDHMKAMRHNAIVCNI 363 (494)
T ss_dssp EEECSSSSCSBCHHHHHHCCTTEEEEEC
T ss_pred EEECCCcccccCHHHHhhCCCCcEEEEc
Confidence 99886544444 5677889998877654
No 473
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=82.99 E-value=1.4 Score=35.48 Aligned_cols=84 Identities=17% Similarity=0.058 Sum_probs=52.5
Q ss_pred CCCCeEEEE--cCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCC---CC---
Q psy14962 15 QEGAKVLDI--GSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRT---GL--- 85 (216)
Q Consensus 15 ~~~~~vldi--G~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~---~~--- 85 (216)
.+|.+||-+ |+|. |..+..+++..+ ++|++++.+++.++.+++. | .+. ++..+-.. ..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~~~~~~~~~l----G-----a~~--~~~~~~~~~~~~v~~~ 235 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQEQADLLKAQ----G-----AVH--VCNAASPTFMQDLTEA 235 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSHHHHHHHHHT----T-----CSC--EEETTSTTHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHhC----C-----CcE--EEeCCChHHHHHHHHH
Confidence 678999999 4544 677788888864 4899999999988877652 2 122 22111110 00
Q ss_pred CCCCCccEEEecCCCCchHHHHHhcC
Q psy14962 86 LHQAPFDAIYLSTYVPEIPYSILLQL 111 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~~~~~~~~~~L 111 (216)
.....+|+|+-...-......+.+.|
T Consensus 236 t~~~g~d~v~d~~g~~~~~~~~~~~l 261 (379)
T 3iup_A 236 LVSTGATIAFDATGGGKLGGQILTCM 261 (379)
T ss_dssp HHHHCCCEEEESCEEESHHHHHHHHH
T ss_pred hcCCCceEEEECCCchhhHHHHHHhc
Confidence 01135999998777665555555555
No 474
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.83 E-value=14 Score=28.50 Aligned_cols=86 Identities=15% Similarity=0.154 Sum_probs=49.5
Q ss_pred CCeEEEEcCCC-chH-HHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 17 GAKVLDIGSGS-GFM-SCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 17 ~~~vldiG~G~-G~~-~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
..+|.-||+|. |.. +..+++. +.+|++.|.+++.++.+.+. + ......+.... -...|+|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~---G~~V~~~dr~~~~~~~~~~~----g--------~~~~~~~~~e~---~~~aDvv 68 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA---GLSTWGADLNPQACANLLAE----G--------ACGAAASAREF---AGVVDAL 68 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHT----T--------CSEEESSSTTT---TTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCeEEEEECCHHHHHHHHHc----C--------CccccCCHHHH---HhcCCEE
Confidence 35788898876 432 2333332 45899999999877655432 2 11112232221 1346999
Q ss_pred EecCCCCchHHHH-------HhcCCCCeEEEEe
Q psy14962 95 YLSTYVPEIPYSI-------LLQLKPGGRLVCG 120 (216)
Q Consensus 95 ~~~~~~~~~~~~~-------~~~L~~gG~lv~~ 120 (216)
++.-+.....+.+ ...+++|..++-.
T Consensus 69 i~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~ 101 (303)
T 3g0o_A 69 VILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVS 101 (303)
T ss_dssp EECCSSHHHHHHHHC--CCCGGGSCTTCEEEEC
T ss_pred EEECCCHHHHHHHHhChhhHHhhCCCCCEEEec
Confidence 9988765433333 3567777766543
No 475
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=82.82 E-value=5.7 Score=30.16 Aligned_cols=77 Identities=10% Similarity=-0.008 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC---------
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--------- 86 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------- 86 (216)
++++|-.|++. .++..+++.+ ..+++|+.++.+++.++...+.+...+ .++.++..|+.+...
T Consensus 4 ~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 4 DKVILITGASG-GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG------GTALAQVLDVTDRHSVAAFAQAAV 76 (264)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCcc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 56777777654 4444444433 235699999999988887777666533 567788888753210
Q ss_pred -CCCCccEEEecCCC
Q psy14962 87 -HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 -~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+.+.
T Consensus 77 ~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 77 DTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 01468999987764
No 476
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=82.64 E-value=2.3 Score=33.66 Aligned_cols=44 Identities=30% Similarity=0.236 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCC-ch-HHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy14962 16 EGAKVLDIGSGS-GF-MSCVFAELVGKTGRVFGVEHMREQCEDAWETVM 62 (216)
Q Consensus 16 ~~~~vldiG~G~-G~-~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~ 62 (216)
...+|.-||+|+ |. ++..++.. +..|+..|++++.++.+.+++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~---G~~V~l~D~~~~~l~~~~~~i~ 50 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASG---GFRVKLYDIEPRQITGALENIR 50 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT---TCCEEEECSCHHHHHHHHHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHH
Confidence 346899999998 44 44444444 5699999999999887776554
No 477
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=82.55 E-value=6.8 Score=30.07 Aligned_cols=62 Identities=13% Similarity=-0.104 Sum_probs=40.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEe-CCHHHHHHHHHHHH-HhCCCCCCCCCeEEEeccCCCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVE-HMREQCEDAWETVM-RIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D-~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
.+.++|-.|++ |.++..+++.+. .+++|+.++ .+++.++.+.+.+. .. ..++.++..|+...
T Consensus 8 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 8 TVPVALVTGAA-KRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR------PNSAITVQADLSNV 72 (291)
T ss_dssp CCCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS------TTCEEEEECCCSSS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc------CCeeEEEEeecCCc
Confidence 35667766655 555555555442 256999999 99887776665554 22 25688888997643
No 478
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.08 E-value=9.6 Score=29.73 Aligned_cols=80 Identities=11% Similarity=0.053 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.+||-.|++.| ++..+++.+ ..+.+|++++.+++.++.+.+.+...+. ..++.++..|+.....
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS----GPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CCeEEEEECCCCCHHHHHHHHHHH
Confidence 4678888887654 444444433 2356999999999888877776655331 1268888999763210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 82 ~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 82 EARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHTCCEEEEEECCCC
T ss_pred HHhCCCCCEEEECCCc
Confidence 11468999988764
No 479
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=81.75 E-value=7.6 Score=28.77 Aligned_cols=78 Identities=10% Similarity=-0.012 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC---------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL--------- 85 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 85 (216)
.+.++|-.|++ |.++..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++..|..+..
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG------FKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCCCHHHHHHHHHHH
Confidence 35677777754 555555544432 25699999999988877777666543 56888889975321
Q ss_pred -CCCCCccEEEecCCC
Q psy14962 86 -LHQAPFDAIYLSTYV 100 (216)
Q Consensus 86 -~~~~~~D~i~~~~~~ 100 (216)
...+.+|+++.+...
T Consensus 77 ~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 77 KAENLAIDILVNNAGI 92 (247)
T ss_dssp HHTTCCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 012468999987764
No 480
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=81.69 E-value=8.7 Score=28.15 Aligned_cols=72 Identities=15% Similarity=0.168 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCe-EEEeccCCCCCC-CCCCcc
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRL-HLRCRDGRTGLL-HQAPFD 92 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~-~~~~~D 92 (216)
.+.+||-.|+ +|.++..+++.+ ..+.+|++++.++...+... . .++ .++.+|...... .-+.+|
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~--------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E--------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H--------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h--------CCCceEEEcccHHHHHHHHcCCC
Confidence 4678887775 566665555543 23569999998887654322 2 357 888999862211 124689
Q ss_pred EEEecCCC
Q psy14962 93 AIYLSTYV 100 (216)
Q Consensus 93 ~i~~~~~~ 100 (216)
+|+.....
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987764
No 481
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.68 E-value=16 Score=28.02 Aligned_cols=89 Identities=15% Similarity=0.131 Sum_probs=49.3
Q ss_pred CeEEEEcCCC-chH-HHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe------ccCC--C--CC
Q psy14962 18 AKVLDIGSGS-GFM-SCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC------RDGR--T--GL 85 (216)
Q Consensus 18 ~~vldiG~G~-G~~-~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------~d~~--~--~~ 85 (216)
.+|.-+|+|. |.. +..+++. +.+|+.+|.+++.++..++. + +.... .... . ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~---g~~V~~~~r~~~~~~~~~~~----g--------~~~~~~~~~~~~~~~~~~~~~~ 68 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG---GNDVTLIDQWPAHIEAIRKN----G--------LIADFNGEEVVANLPIFSPEEI 68 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHH----C--------EEEEETTEEEEECCCEECGGGC
T ss_pred CeEEEECcCHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHhC----C--------EEEEeCCCeeEecceeecchhh
Confidence 3788999876 432 2333332 45899999998877655443 1 11111 0000 0 01
Q ss_pred CC-CCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEee
Q psy14962 86 LH-QAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~-~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~ 121 (216)
.. -..+|+|+..-+... +++.+...++++..++...
T Consensus 69 ~~~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 69 DHQNEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CTTSCCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred cccCCCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEec
Confidence 00 125899998776533 4456667787777665543
No 482
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=81.54 E-value=9.8 Score=28.28 Aligned_cols=77 Identities=9% Similarity=-0.005 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-----C--
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-----H-- 87 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~-- 87 (216)
.+.+||-.|++ |.++..+++.+. .+.+|+.++.++...+...+.+...+ .++.++.+|+.+... .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG------HDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEEecCCCHHHHHHHHHHH
Confidence 46778877754 555555555432 25699999999877666555554422 468888899763211 0
Q ss_pred ---CCCccEEEecCC
Q psy14962 88 ---QAPFDAIYLSTY 99 (216)
Q Consensus 88 ---~~~~D~i~~~~~ 99 (216)
.+.+|+++.+..
T Consensus 85 ~~~~~~id~vi~~Ag 99 (260)
T 3awd_A 85 HEQEGRVDILVACAG 99 (260)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 136899987665
No 483
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=81.24 E-value=11 Score=31.18 Aligned_cols=96 Identities=18% Similarity=0.199 Sum_probs=54.7
Q ss_pred CeEEEEcCCC-ch-HHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHH-------hC-CCCC--CCCCeEEEeccCCCCC
Q psy14962 18 AKVLDIGSGS-GF-MSCVFAELVGKTGRVFGVEHMREQCEDAWETVMR-------IR-PDLL--NDGRLHLRCRDGRTGL 85 (216)
Q Consensus 18 ~~vldiG~G~-G~-~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-------~~-~~~~--~~~~~~~~~~d~~~~~ 85 (216)
.+|.-||+|. |. ++..++.. +..|+..|.+++.++.+.+.... .+ ++.. ......+ ..|..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~---G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~--- 110 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV---GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK--- 110 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG---
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH---
Confidence 4699999987 43 33333333 45899999999988877653321 11 0000 0011222 23321
Q ss_pred CCCCCccEEEecCCCC-----chHHHHHhcCCCCeEEEEee
Q psy14962 86 LHQAPFDAIYLSTYVP-----EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 86 ~~~~~~D~i~~~~~~~-----~~~~~~~~~L~~gG~lv~~~ 121 (216)
.-...|+|+..-+-. .++..+...++++.+++..+
T Consensus 111 -~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp -GGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -HHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 123479999877643 24456777888887776533
No 484
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=81.17 E-value=9.1 Score=32.05 Aligned_cols=96 Identities=20% Similarity=0.109 Sum_probs=55.8
Q ss_pred CeEEEEcCCC-ch-HHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCC------------CeEEEeccCCC
Q psy14962 18 AKVLDIGSGS-GF-MSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDG------------RLHLRCRDGRT 83 (216)
Q Consensus 18 ~~vldiG~G~-G~-~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~------------~~~~~~~d~~~ 83 (216)
.+|.-||+|. |. ++..+++. +..|+..|.+++.++.+.+............. ++.+. .|..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a---G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~- 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH---GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIH- 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHH-
Confidence 4688888887 43 34444443 45899999999999887765432110000001 22221 2221
Q ss_pred CCCCCCCccEEEecCCCC-----chHHHHHhcCCCCeEEEEee
Q psy14962 84 GLLHQAPFDAIYLSTYVP-----EIPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 84 ~~~~~~~~D~i~~~~~~~-----~~~~~~~~~L~~gG~lv~~~ 121 (216)
.-...|+|+..-+-. .++.++...++++.+++..+
T Consensus 81 ---~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 81 ---ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp ---GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ---HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 123479999876643 35567778888888775533
No 485
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.12 E-value=6.4 Score=29.53 Aligned_cols=78 Identities=9% Similarity=-0.033 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++. .++..+++.+. .+++|+.++.+++..+...+.+...+ .++.++..|..+...
T Consensus 11 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 11 NDAVAIVTGAAA-GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG------GKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp TTCEEEECSCSS-HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHH
Confidence 466777777655 44444443321 25699999999988877776665533 578888889763211
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 84 ~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 01468999987664
No 486
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=81.05 E-value=10 Score=28.64 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.+||-.|++ |.++..+++.+. .+.+|++++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG------AKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC------CeEEEEEeeCCCHHHHHHHHHHH
Confidence 45678877754 556655555432 25699999999887776665555432 468888899763210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 103 ~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHTCCCSEEEECCCC
T ss_pred HHHCCCCcEEEECCCc
Confidence 11468999987654
No 487
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.97 E-value=4.6 Score=30.03 Aligned_cols=76 Identities=12% Similarity=0.081 Sum_probs=47.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC------CC
Q psy14962 15 QEGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL------LH 87 (216)
Q Consensus 15 ~~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~ 87 (216)
.++.+||-.|++. .++..+++.+. .+.+|+.++.+++.++...+.+. .++.+...|..... ..
T Consensus 12 ~~~k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 12 LTGKTSLITGASS-GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---------DNYTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp CTTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---------SSEEEEECCTTSHHHHHHHHHT
T ss_pred CCCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---------cCccEEEcCCCCHHHHHHHHHh
Confidence 4567788777654 45555544431 25699999999887766554432 46788888875321 11
Q ss_pred CCCccEEEecCCC
Q psy14962 88 QAPFDAIYLSTYV 100 (216)
Q Consensus 88 ~~~~D~i~~~~~~ 100 (216)
.+..|+++.+...
T Consensus 82 ~~~id~li~~Ag~ 94 (249)
T 3f9i_A 82 TSNLDILVCNAGI 94 (249)
T ss_dssp CSCCSEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 2468999887664
No 488
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=80.83 E-value=8.4 Score=30.33 Aligned_cols=89 Identities=11% Similarity=0.070 Sum_probs=49.8
Q ss_pred CeEEEEcCCC-chH-HHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEec------c---CCCCCC
Q psy14962 18 AKVLDIGSGS-GFM-SCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCR------D---GRTGLL 86 (216)
Q Consensus 18 ~~vldiG~G~-G~~-~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~------d---~~~~~~ 86 (216)
.+|.-+|+|. |.. +..+++. +..|+.+|.+++.++..++.. + +.+... . ......
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~---g~~V~~~~r~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~ 70 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK---GQSVLAWDIDAQRIKEIQDRG---A--------IIAEGPGLAGTAHPDLLTSDIG 70 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHHT---S--------EEEESSSCCEEECCSEEESCHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC---CCEEEEEeCCHHHHHHHHhcC---C--------eEEeccccccccccceecCCHH
Confidence 4799999876 433 2333332 458999999988776554431 1 111100 0 000100
Q ss_pred C-CCCccEEEecCCCCc---hHHHHHhcCCCCeEEEEe
Q psy14962 87 H-QAPFDAIYLSTYVPE---IPYSILLQLKPGGRLVCG 120 (216)
Q Consensus 87 ~-~~~~D~i~~~~~~~~---~~~~~~~~L~~gG~lv~~ 120 (216)
. -..+|+|+..-+... +++.+...++++..++..
T Consensus 71 ~~~~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 71 LAVKDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp HHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred HHHhcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 0 135899998777654 445666678887766554
No 489
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=80.82 E-value=5.6 Score=30.05 Aligned_cols=80 Identities=16% Similarity=0.093 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCC------CCC
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGL------LHQ 88 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~ 88 (216)
.++++|-.|++ |.++..+++.+. .+++|+.++.+++.++...+.+...+. ...+.++..|..... ..-
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 83 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP----DAILQPVVADLGTEQGCQDVIEKY 83 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT----TCEEEEEECCTTSHHHHHHHHHHC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC----CceEEEEecCCCCHHHHHHHHHhc
Confidence 46677777755 455555544431 256999999999887776666655321 245677788875321 112
Q ss_pred CCccEEEecCCC
Q psy14962 89 APFDAIYLSTYV 100 (216)
Q Consensus 89 ~~~D~i~~~~~~ 100 (216)
+..|+++.+...
T Consensus 84 g~id~lv~nAg~ 95 (267)
T 3t4x_A 84 PKVDILINNLGI 95 (267)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987764
No 490
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=80.67 E-value=11 Score=27.96 Aligned_cols=78 Identities=12% Similarity=0.025 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.++|-.|++ |.++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++..|+.+...
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG------AKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCCCCHHHHHHHHHHH
Confidence 46778888865 445555544432 25699999999887776665554422 467888888753210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 79 VEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 01468999887653
No 491
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=80.53 E-value=4.8 Score=31.69 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=49.6
Q ss_pred CCeEEEEcCCC-chHHHHHHH-HhCCCcEEEE-EeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccE
Q psy14962 17 GAKVLDIGSGS-GFMSCVFAE-LVGKTGRVFG-VEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDA 93 (216)
Q Consensus 17 ~~~vldiG~G~-G~~~~~l~~-~~~~~~~v~~-~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 93 (216)
..+|.-||||. |......+. . .++.++++ +|.+++..+...+ ..+ +.....|.... .....+|+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~-~~~~~~vav~d~~~~~~~~~a~---~~g--------~~~~~~~~~~~-l~~~~~D~ 74 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNK-IQGVKLVAACALDSNQLEWAKN---ELG--------VETTYTNYKDM-IDTENIDA 74 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHT-CSSEEEEEEECSCHHHHHHHHH---TTC--------CSEEESCHHHH-HTTSCCSE
T ss_pred cceEEEEcCCHHHHHHHHHHHhc-CCCcEEEEEecCCHHHHHHHHH---HhC--------CCcccCCHHHH-hcCCCCCE
Confidence 35799999986 543333333 2 23556654 5999876544322 211 21112232211 12235899
Q ss_pred EEecCCCCchHHHHHhcCCCCeEEEE
Q psy14962 94 IYLSTYVPEIPYSILLQLKPGGRLVC 119 (216)
Q Consensus 94 i~~~~~~~~~~~~~~~~L~~gG~lv~ 119 (216)
|+...+.......+...|+.|-.+++
T Consensus 75 V~i~tp~~~h~~~~~~al~~G~~v~~ 100 (346)
T 3cea_A 75 IFIVAPTPFHPEMTIYAMNAGLNVFC 100 (346)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred EEEeCChHhHHHHHHHHHHCCCEEEE
Confidence 99887766555666667777655554
No 492
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=80.47 E-value=8.5 Score=30.18 Aligned_cols=62 Identities=13% Similarity=-0.104 Sum_probs=39.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEe-CCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCC
Q psy14962 17 GAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVE-HMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTG 84 (216)
Q Consensus 17 ~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (216)
+.++|-.|+ +|.++..+++.+. .+++|+.++ .+++.++.+.+.+.... ..++.++.+|+...
T Consensus 46 ~k~~lVTGa-s~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 46 VPVALVTGA-AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-----PNSAITVQADLSNV 109 (328)
T ss_dssp CCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-----TTCEEEEECCCSSS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-----CCeEEEEEeeCCCc
Confidence 456666665 4556655555442 356999999 88887776666554111 25688888997643
No 493
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=80.40 E-value=2.2 Score=34.26 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
.|.+|.-+|.|. |......++.+ +.+|++.|.++...+.+.+. + +... .+.... -...|+|
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~----g--------~~~~-~~l~el---l~~aDvV 224 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKET----G--------AKFV-EDLNEM---LPKCDVI 224 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHHH----C--------CEEC-SCHHHH---GGGCSEE
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHhC----C--------CeEc-CCHHHH---HhcCCEE
Confidence 578999998877 55444444444 45899999876433333221 1 2211 111111 1347999
Q ss_pred EecCCCC----c-hHHHHHhcCCCCeEEEEee
Q psy14962 95 YLSTYVP----E-IPYSILLQLKPGGRLVCGV 121 (216)
Q Consensus 95 ~~~~~~~----~-~~~~~~~~L~~gG~lv~~~ 121 (216)
+.+.+.. + +-....+.+|||++++=+.
T Consensus 225 ~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 225 VINMPLTEKTRGMFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp EECSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred EECCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence 9888763 2 2367778899998887654
No 494
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=79.86 E-value=8.5 Score=30.05 Aligned_cols=99 Identities=12% Similarity=0.098 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCC-ch-HHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEe-ccCCCCCCCCCCcc
Q psy14962 16 EGAKVLDIGSGS-GF-MSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRC-RDGRTGLLHQAPFD 92 (216)
Q Consensus 16 ~~~~vldiG~G~-G~-~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D 92 (216)
...+|.-+|+|. |. ++..+++. +..|+.+ .+++.++..++. +.... .....+.. .........-..+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~---G~~V~l~-~~~~~~~~i~~~----g~~~~-~~~~~~~~~~~~~~~~~~~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA---GHEVILI-ARPQHVQAIEAT----GLRLE-TQSFDEQVKVSASSDPSAVQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT---TCEEEEE-CCHHHHHHHHHH----CEEEE-CSSCEEEECCEEESCGGGGTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC---CCeEEEE-EcHhHHHHHHhC----CeEEE-cCCCcEEEeeeeeCCHHHcCCCC
Confidence 346899999987 43 33444443 4589988 888777666543 10000 00001100 00001111124689
Q ss_pred EEEecCCCCc---hHHHHHhcCCCCeEEEEeecC
Q psy14962 93 AIYLSTYVPE---IPYSILLQLKPGGRLVCGVGK 123 (216)
Q Consensus 93 ~i~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~ 123 (216)
+|+..-+... +++.+...++++..++.....
T Consensus 89 ~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nG 122 (318)
T 3hwr_A 89 LVLFCVKSTDTQSAALAMKPALAKSALVLSLQNG 122 (318)
T ss_dssp EEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSS
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 9998776654 445666777787766554433
No 495
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.81 E-value=6.9 Score=29.83 Aligned_cols=78 Identities=10% Similarity=-0.002 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC-----C--
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-----H-- 87 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~-- 87 (216)
.+.++|-.|++. .++..+++.+ ..+++|+.++.+++.++...+.+...+ .++.++.+|+.+... .
T Consensus 31 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 31 SGKRALITGAST-GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG------GKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT------CCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CeEEEEEcCCCCHHHHHHHHHHH
Confidence 467788887665 4444444433 125699999999887777766665533 568888889763221 0
Q ss_pred ---CCCccEEEecCCC
Q psy14962 88 ---QAPFDAIYLSTYV 100 (216)
Q Consensus 88 ---~~~~D~i~~~~~~ 100 (216)
.+.+|+++.+...
T Consensus 104 ~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1468999987764
No 496
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=79.71 E-value=12 Score=28.42 Aligned_cols=78 Identities=17% Similarity=0.082 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.++|-.|++ |.++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG------VEADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CceEEEECCCCCHHHHHHHHHHH
Confidence 35678877765 555555544432 25699999999887766655554422 467888888753210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 94 ~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 94 VERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHTCSCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 11468999987653
No 497
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=79.61 E-value=20 Score=28.00 Aligned_cols=102 Identities=10% Similarity=-0.066 Sum_probs=63.5
Q ss_pred CeEEEEcCCCchHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------CCC
Q psy14962 18 AKVLDIGSGSGFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL--------HQA 89 (216)
Q Consensus 18 ~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~ 89 (216)
..|+++|||-=.....+.. ..+..++-+| .|..++..++.+.+.+. ....+..++.+|+...+. ..+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~--~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGV--TPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTC--CCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CeEEEeCCCCCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCC--CCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 4699999998555333221 1235889999 69999888888875321 113567888899865211 012
Q ss_pred CccEEEecCCCCc--------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 90 PFDAIYLSTYVPE--------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 90 ~~D~i~~~~~~~~--------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
.--++++-..+.. +++.+...+.||+.+++...++
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 2233444444433 4456667778999999976554
No 498
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=79.53 E-value=5.5 Score=29.91 Aligned_cols=78 Identities=17% Similarity=0.061 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELV-GKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.++++|-.|++ |.++..+++.+ ..+++|+.++.+++.++.+.+.+... ..++.++.+|+.+...
T Consensus 5 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 5 KEKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF------PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS------TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCcEEEEEccCCCHHHHHHHHHHH
Confidence 46677777765 44555554443 12569999999998877776655432 2578888899763210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+..|+++.+...
T Consensus 78 ~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 78 DEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 01468999987763
No 499
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=79.33 E-value=11 Score=28.16 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCC--------
Q psy14962 16 EGAKVLDIGSGSGFMSCVFAELVG-KTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLL-------- 86 (216)
Q Consensus 16 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------- 86 (216)
.+.++|-.|++. .++..+++.+. .+.+|+.++.+++.++...+.+...+ .++.++.+|+.+...
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 6 NGKVCLVTGAGG-NIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG------VEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------SCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC------CcEEEEEecCCCHHHHHHHHHHH
Confidence 467788777654 45544544331 25699999999887766655554422 467888888753210
Q ss_pred --CCCCccEEEecCCC
Q psy14962 87 --HQAPFDAIYLSTYV 100 (216)
Q Consensus 87 --~~~~~D~i~~~~~~ 100 (216)
..+.+|+++.+...
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 79 VRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 01468999987653
No 500
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=79.32 E-value=21 Score=27.92 Aligned_cols=101 Identities=13% Similarity=0.097 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCCCCCCeEEEeccCCCCCCCCCCccEE
Q psy14962 16 EGAKVLDIGSGS-GFMSCVFAELVGKTGRVFGVEHMREQCEDAWETVMRIRPDLLNDGRLHLRCRDGRTGLLHQAPFDAI 94 (216)
Q Consensus 16 ~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i 94 (216)
+..+|.-+|+|. |......+...+...+++.+|++++.++.....+.+... ....++++...+ .. .-...|+|
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~--~~~~~~~i~~~~-~~---al~~aDvV 78 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKV--FAPKPVDIWHGD-YD---DCRDADLV 78 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTT--SSSSCCEEEECC-GG---GTTTCSEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhh--hcCCCeEEEcCc-HH---HhCCCCEE
Confidence 346899999987 443333333323334899999998754432222222110 111244444322 11 12347999
Q ss_pred EecCCCCc-------------------hHHHHHhcCCCCeEEEEeecCC
Q psy14962 95 YLSTYVPE-------------------IPYSILLQLKPGGRLVCGVGKS 124 (216)
Q Consensus 95 ~~~~~~~~-------------------~~~~~~~~L~~gG~lv~~~~~~ 124 (216)
+...+.+. +.+.+.+. .|++.+++. .+|
T Consensus 79 iia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~-tNP 125 (316)
T 1ldn_A 79 VICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVA-TNP 125 (316)
T ss_dssp EECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEEC-SSS
T ss_pred EEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEe-CCc
Confidence 98765432 11344444 589987774 445
Done!