Query psy14967
Match_columns 168
No_of_seqs 201 out of 1403
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 17:08:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2klr_A Alpha-crystallin B chai 100.0 7.1E-32 2.4E-36 207.5 11.4 151 5-164 8-163 (175)
2 3l1e_A Alpha-crystallin A chai 100.0 3.3E-28 1.1E-32 172.9 14.0 98 66-163 3-105 (106)
3 4eld_A MJ16.5-P1, small heat s 100.0 7E-29 2.4E-33 188.2 9.5 149 6-163 1-161 (161)
4 2wj5_A Heat shock protein beta 100.0 6.4E-28 2.2E-32 170.0 13.0 98 67-164 3-100 (101)
5 3q9p_A Heat shock protein beta 99.9 9.8E-26 3.3E-30 154.1 10.6 84 70-153 2-85 (85)
6 1gme_A Heat shock protein 16.9 99.9 2.2E-25 7.4E-30 167.5 11.7 99 65-164 43-149 (151)
7 2y1y_A Alpha-crystallin B chai 99.9 6.4E-25 2.2E-29 151.5 11.7 88 71-158 2-89 (90)
8 3aab_A Putative uncharacterize 99.9 3E-25 1E-29 161.2 10.6 89 66-156 25-119 (123)
9 3gla_A Low molecular weight he 99.9 1.4E-24 4.6E-29 152.1 13.1 90 65-155 4-100 (100)
10 4fei_A Heat shock protein-rela 99.9 2.3E-24 8E-29 151.8 13.3 92 65-157 6-99 (102)
11 2bol_A TSP36, small heat shock 99.9 6.4E-22 2.2E-26 164.2 10.5 96 65-162 98-197 (314)
12 2bol_A TSP36, small heat shock 99.8 1.3E-19 4.4E-24 150.3 8.0 87 66-153 221-314 (314)
13 1rl1_A Suppressor of G2 allele 99.1 4.4E-10 1.5E-14 79.7 8.1 81 65-154 9-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 6.3E-10 2.2E-14 75.7 6.9 81 66-155 3-83 (92)
15 3eud_A Protein SHQ1; CS domain 98.1 3.2E-05 1.1E-09 54.7 10.6 79 65-156 17-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.1 4.5E-06 1.5E-10 60.8 4.9 77 66-155 4-84 (134)
17 1x5m_A Calcyclin-binding prote 97.8 0.00027 9.1E-09 50.7 10.0 81 66-155 21-105 (127)
18 1wh0_A Ubiquitin carboxyl-term 97.7 0.00023 7.8E-09 51.8 8.4 88 65-154 19-112 (134)
19 1wgv_A KIAA1068 protein; CS do 97.6 0.0012 4E-08 47.0 11.8 80 66-154 20-102 (124)
20 1ejf_A Progesterone receptor P 97.5 0.00077 2.6E-08 48.1 9.3 78 67-154 5-82 (125)
21 3igf_A ALL4481 protein; two-do 97.4 0.00037 1.3E-08 58.7 7.4 70 67-152 299-369 (374)
22 1wfi_A Nuclear distribution ge 97.4 0.0015 5.3E-08 46.8 9.4 77 66-154 8-88 (131)
23 2o30_A Nuclear movement protei 97.2 0.0015 5.1E-08 47.0 8.2 75 66-153 5-80 (131)
24 3qor_A Nuclear migration prote 97.2 0.002 6.7E-08 45.8 7.9 77 66-154 17-97 (121)
25 2kmw_A Uncharacterized protein 97.1 0.0011 3.7E-08 49.0 6.7 77 66-154 5-82 (150)
26 2rh0_A NUDC domain-containing 97.1 0.0026 8.8E-08 47.3 8.6 76 66-154 14-91 (157)
27 2cg9_X CO-chaperone protein SB 97.1 0.0004 1.4E-08 50.3 3.7 84 66-154 7-98 (134)
28 4fei_A Heat shock protein-rela 78.6 7.9 0.00027 25.7 6.6 33 77-109 63-96 (102)
29 3q9p_A Heat shock protein beta 78.1 3.1 0.0001 26.9 4.2 34 119-154 8-41 (85)
30 3gla_A Low molecular weight he 70.8 8.6 0.00029 25.2 5.1 32 76-107 65-97 (100)
31 2y1y_A Alpha-crystallin B chai 68.3 6.2 0.00021 25.6 3.9 33 119-153 7-39 (90)
32 2wj5_A Heat shock protein beta 64.7 7.8 0.00027 25.8 3.9 33 119-153 12-44 (101)
33 4eld_A MJ16.5-P1, small heat s 64.3 14 0.00048 26.6 5.5 34 76-109 118-152 (161)
34 3aab_A Putative uncharacterize 64.2 11 0.00039 25.7 4.8 35 119-155 35-70 (123)
35 3l1e_A Alpha-crystallin A chai 61.7 13 0.00046 24.8 4.7 33 77-109 57-91 (106)
36 2ks0_A Uncharacterized protein 58.0 5.6 0.00019 25.3 2.0 23 84-106 16-38 (71)
37 2cql_A OK/SW-CL.103, 60S ribos 56.2 9.8 0.00033 25.6 3.2 18 88-105 20-37 (100)
38 1q5l_A Chaperone protein DNAK; 54.0 17 0.00058 25.5 4.3 30 135-164 102-131 (135)
39 1gme_A Heat shock protein 16.9 53.6 25 0.00086 25.0 5.2 33 76-108 105-138 (151)
40 1rl6_A Protein (ribosomal prot 52.0 32 0.0011 25.5 5.7 45 88-151 11-55 (177)
41 1nkw_E 50S ribosomal protein L 51.8 36 0.0012 26.1 6.1 45 88-151 39-83 (212)
42 2klr_A Alpha-crystallin B chai 48.1 21 0.00072 26.3 4.1 32 77-108 118-151 (175)
43 3h0x_A 78 kDa glucose-regulate 45.0 27 0.00092 24.9 4.2 29 135-163 85-113 (152)
44 3dqg_A Heat shock 70 kDa prote 44.2 28 0.00097 24.9 4.2 29 135-163 85-113 (151)
45 1rl1_A Suppressor of G2 allele 43.8 27 0.00091 23.3 3.9 35 74-108 53-88 (114)
46 2kgs_A Uncharacterized protein 42.6 17 0.00057 25.5 2.7 25 83-107 2-26 (132)
47 3dob_A Heat shock 70 kDa prote 38.3 27 0.00091 25.0 3.3 29 135-163 85-113 (152)
48 2gjh_A Designed protein; oblig 37.6 21 0.00073 21.1 2.1 23 87-109 31-53 (62)
49 1qys_A TOP7; alpha-beta, novel 35.5 38 0.0013 22.0 3.3 23 86-108 74-96 (106)
50 3n8e_A Stress-70 protein, mito 32.7 34 0.0011 25.3 3.1 29 135-163 105-133 (182)
51 2op6_A Heat shock 70 kDa prote 32.1 38 0.0013 23.9 3.2 28 135-162 85-112 (152)
52 4a17_E RPL9, 60S ribosomal pro 30.5 39 0.0013 25.3 3.2 18 88-105 13-30 (188)
53 1vq8_E 50S ribosomal protein L 30.4 40 0.0014 25.1 3.2 18 88-105 9-26 (178)
54 3oeq_A Frataxin homolog, mitoc 30.4 57 0.0019 22.8 3.8 16 135-151 49-64 (123)
55 3u5e_H L8, RP24, YL11, 60S rib 30.3 39 0.0013 25.3 3.2 18 88-105 13-30 (191)
56 3iz5_F 60S ribosomal protein L 30.0 40 0.0014 25.3 3.2 18 88-105 13-30 (190)
57 1n91_A ORF, hypothetical prote 29.7 84 0.0029 21.3 4.5 35 70-105 8-43 (108)
58 1ew4_A CYAY protein; friedreic 29.6 31 0.0011 23.3 2.3 17 134-151 29-45 (106)
59 4e81_A Chaperone protein DNAK; 29.4 41 0.0014 25.5 3.2 29 135-163 86-114 (219)
60 3v2d_H 50S ribosomal protein L 29.0 34 0.0012 25.4 2.6 18 88-105 12-29 (180)
61 3jx8_A Putative lipoprotein; s 28.9 47 0.0016 25.4 3.5 41 67-107 33-73 (250)
62 2zkr_e 60S ribosomal protein L 28.5 44 0.0015 25.1 3.2 18 88-105 13-30 (192)
63 2o30_A Nuclear movement protei 28.3 60 0.002 22.3 3.7 30 119-149 15-44 (131)
64 2uwa_A Cellulase; glycoside hy 26.0 64 0.0022 25.3 3.9 41 87-129 31-74 (274)
65 3j21_F 50S ribosomal protein L 25.0 34 0.0012 25.6 1.9 18 88-105 14-31 (184)
66 1u00_A HSC66, chaperone protei 23.4 66 0.0022 24.3 3.4 29 135-163 83-111 (227)
67 3qzm_A Iron-regulated surface 22.3 1.1E+02 0.0038 21.3 4.1 84 66-163 33-118 (127)
No 1
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.97 E-value=7.1e-32 Score=207.46 Aligned_cols=151 Identities=41% Similarity=0.646 Sum_probs=78.1
Q ss_pred cCCCcCcCccCCCCChhhhhhcCCCCCccccccchhccccCCCCCCCCCCCchhhhh----ccCCcceeeEeCCCeEEEE
Q psy14967 5 PLLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPWRSLA----RSNSGVSNITNEENKVQVI 80 (168)
Q Consensus 5 P~~~~~~~~~~~~~~r~~d~~f~~~~~~~d~~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~~p~~di~e~~~~~~v~ 80 (168)
||++| +|.++.++.|.||++|+.++...|++..++.. +++++++.++. ......+||++++++|+|+
T Consensus 8 ~~~~~-~~~~~~~~~rl~d~~fg~~~~~~~l~~~~~~~--------~~~~~~~~~~~r~~~~~~~~~~dv~e~~d~~~v~ 78 (175)
T 2klr_A 8 PWIRR-PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSL--------SPFYLRPPSFLRAPSWFDTGLSEMRLEKDRFSVN 78 (175)
T ss_dssp ----------------------------------------------------------------------CCCCSEEEEE
T ss_pred CcccC-ccccccCCcchhhhhcCCCCChhhhccccccc--------CccccCchhhccccccccCCceEEEEcCCeEEEE
Confidence 56665 55555568999999999987777665433211 11222211000 1123458999999999999
Q ss_pred EeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEcCcCCCC-Cee
Q psy14967 81 LDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVSTR-FYF 159 (168)
Q Consensus 81 ~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK~~~~~-~~~ 159 (168)
++||||++|||+|+++++.|+|+|+++.++++.+|.+++|+|+|.||++||.++|+|+|++||||+|++||+++.+ .++
T Consensus 79 ~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~~~~~~r~ 158 (175)
T 2klr_A 79 LDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPERT 158 (175)
T ss_dssp ECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEEEEECC--------
T ss_pred EECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEEEEECCCCCCCCeE
Confidence 9999999999999999999999999887666778999999999999999999999999944999999999987655 478
Q ss_pred eEEEe
Q psy14967 160 FSLKL 164 (168)
Q Consensus 160 i~i~~ 164 (168)
|+|+.
T Consensus 159 I~I~~ 163 (175)
T 2klr_A 159 IPITR 163 (175)
T ss_dssp -----
T ss_pred EEEec
Confidence 88764
No 2
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.96 E-value=3.3e-28 Score=172.86 Aligned_cols=98 Identities=39% Similarity=0.771 Sum_probs=89.6
Q ss_pred cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967 66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL 145 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL 145 (168)
+.++|++++++|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|.|+|.||.+||.++|+|+|++||+|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGML 82 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEE
Confidence 45899999999999999999999999999999999999998776667789999999999999999999999999449999
Q ss_pred EEEEcCcCCC-----CCeeeEEE
Q psy14967 146 TITAPKRVST-----RFYFFSLK 163 (168)
Q Consensus 146 ~I~~PK~~~~-----~~~~i~i~ 163 (168)
+|++||.++. ++++|+|+
T Consensus 83 ~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 83 TFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEEEccCcccccCCCCeEeeec
Confidence 9999999876 67777763
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.95 E-value=7e-29 Score=188.18 Aligned_cols=149 Identities=17% Similarity=0.250 Sum_probs=87.0
Q ss_pred CCCcCcCccCCCCChhhhhhcCCCCCccccccchhccccCCCCCCCCCCCch----hhhhccCCcceeeEeCCCeEEEEE
Q psy14967 6 LLFRDWWDDFDRPSRLLDQHFGLGLRRDDLLSNWSSLAQSARPIGAGYLRPW----RSLARSNSGVSNITNEENKVQVIL 81 (168)
Q Consensus 6 ~~~~~~~~~~~~~~r~~d~~f~~~~~~~d~~~~~~~~~~~~~~~~~~~~~p~----~~~~~~~~p~~di~e~~~~~~v~~ 81 (168)
++.||||+++. .|.|+++|+..++..-....... .+ .+....|. ........+++||++++++|+|++
T Consensus 1 ~~~~dPF~~~~--~r~~~~~f~~~~~~~~~~~~~~~---~p---~~~~~~p~~a~~~~~~~~~~~pvdi~e~~~~~~v~~ 72 (161)
T 4eld_A 1 MFGRDPFDSLF--ERMFKEFFATPMTGTTMIQSSTP---LP---PAAIESPAVAAGIQISGKGFMPISIIEGDQHIKVIA 72 (161)
T ss_dssp ----------------------------------------------------CCCCCEEEEESCCCEEEEECSSEEEEEE
T ss_pred CCCcccchHHH--HHHHHHHhCCCCccccccCCccc---CC---cccccCccccccccccCCcccceeEEEeCCEEEEEE
Confidence 36789999874 57788888765433211110000 00 00000000 000112234499999999999999
Q ss_pred eCCCCCCCceEEEEECCEEEEEEEEeccc--CCCceE------EEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEcCcC
Q psy14967 82 DVQQFSPNEISIKTVDGFILVEGKHEEKE--DEHGFI------SRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRV 153 (168)
Q Consensus 82 ~lpG~~~edi~V~v~~~~L~I~g~~~~~~--~~~~~~------~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK~~ 153 (168)
+|||+++|||+|+++++.|+|+|+++... ++.+|. .++|+|+|.||.+||.++|+|+| +||+|+|++||++
T Consensus 73 dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~-~nGvL~I~lpK~~ 151 (161)
T 4eld_A 73 WLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF-ENGVLSVILPKAE 151 (161)
T ss_dssp ECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE-ETTEEEEEEEBCG
T ss_pred ECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE-ECCEEEEEEEcCC
Confidence 99999999999999999999999987632 223343 24899999999999999999999 5999999999999
Q ss_pred CCCCeeeEEE
Q psy14967 154 STRFYFFSLK 163 (168)
Q Consensus 154 ~~~~~~i~i~ 163 (168)
+.++++|+|+
T Consensus 152 ~~~~r~I~Ie 161 (161)
T 4eld_A 152 SSIKKGINIE 161 (161)
T ss_dssp GGSCCCCCCC
T ss_pred CCCCcEeecC
Confidence 9999998874
No 4
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.95 E-value=6.4e-28 Score=169.99 Aligned_cols=98 Identities=41% Similarity=0.650 Sum_probs=88.5
Q ss_pred ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEE
Q psy14967 67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT 146 (168)
Q Consensus 67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~ 146 (168)
.+||++++++|.|.++||||+++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++|+|+|++||+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~ 82 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLS 82 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEE
Confidence 57999999999999999999999999999999999999987766667788999999999999999999999994499999
Q ss_pred EEEcCcCCCCCeeeEEEe
Q psy14967 147 ITAPKRVSTRFYFFSLKL 164 (168)
Q Consensus 147 I~~PK~~~~~~~~i~i~~ 164 (168)
|++||.++.++++++|+.
T Consensus 83 I~lPK~~~~~~~~~~i~~ 100 (101)
T 2wj5_A 83 IQATPASAQASLPSPPAA 100 (101)
T ss_dssp EEECBCCCCCSSCC----
T ss_pred EEEECCCcCCCCCCcccc
Confidence 999999999999998864
No 5
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.93 E-value=9.8e-26 Score=154.11 Aligned_cols=84 Identities=44% Similarity=0.784 Sum_probs=71.8
Q ss_pred eEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEE
Q psy14967 70 ITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 149 (168)
Q Consensus 70 i~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~ 149 (168)
+.|++++|.|.++||||+++||+|+++++.|+|+|+++...++.++.+++|.|+|.||++||+++|+|+|++||+|+|++
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEE
Confidence 46899999999999999999999999999999999988765556778899999999999999999999994499999999
Q ss_pred cCcC
Q psy14967 150 PKRV 153 (168)
Q Consensus 150 PK~~ 153 (168)
||.+
T Consensus 82 PK~k 85 (85)
T 3q9p_A 82 PMPK 85 (85)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9953
No 6
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.93 E-value=2.2e-25 Score=167.50 Aligned_cols=99 Identities=19% Similarity=0.363 Sum_probs=84.4
Q ss_pred CcceeeEeCCCeEEEEEeCCCCCCCceEEEEE-CCEEEEEEEEeccc--CCCceEE-----EEEEEEEECCcCcccCCcE
Q psy14967 65 SGVSNITNEENKVQVILDVQQFSPNEISIKTV-DGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVT 136 (168)
Q Consensus 65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~-~~~L~I~g~~~~~~--~~~~~~~-----r~F~r~~~LP~~vd~~~i~ 136 (168)
.|.+||++++++|+|+++|||++++||+|+++ ++.|+|+|+++... ++..|++ ++|+|+|.||.+||.++|+
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~ 122 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK 122 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence 48899999999999999999999999999995 78999999876543 2334543 5799999999999999999
Q ss_pred EEeCCCCEEEEEEcCcCCCCCeeeEEEe
Q psy14967 137 SSLSSDGVLTITAPKRVSTRFYFFSLKL 164 (168)
Q Consensus 137 A~~~~~GiL~I~~PK~~~~~~~~i~i~~ 164 (168)
|+| +||+|+|++||.++.+++.+.|+|
T Consensus 123 A~~-~nGvL~I~lPK~~~~~~~~~~I~I 149 (151)
T 1gme_A 123 AGL-ENGVLTVTVPKAEVKKPEVKAIQI 149 (151)
T ss_dssp EEE-ETTEEEEEEECCCCCTTCCCCCCC
T ss_pred EEE-ECCEEEEEEEccCcCCCCCeEeee
Confidence 999 699999999999887765544443
No 7
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.92 E-value=6.4e-25 Score=151.47 Aligned_cols=88 Identities=48% Similarity=0.804 Sum_probs=73.5
Q ss_pred EeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEc
Q psy14967 71 TNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAP 150 (168)
Q Consensus 71 ~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~P 150 (168)
.+++++|.|.++|||++++||+|+++++.|+|+|+++...++.+|.+++|+|+|.||.+||.++|+|+|++||+|+|++|
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence 36789999999999999999999999999999999877666678999999999999999999999999944999999999
Q ss_pred CcCCCCCe
Q psy14967 151 KRVSTRFY 158 (168)
Q Consensus 151 K~~~~~~~ 158 (168)
|.++++++
T Consensus 82 K~~~~~p~ 89 (90)
T 2y1y_A 82 RKQVSGPE 89 (90)
T ss_dssp BC------
T ss_pred cCCCCCCC
Confidence 99888775
No 8
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.92 E-value=3e-25 Score=161.20 Aligned_cols=89 Identities=19% Similarity=0.259 Sum_probs=80.7
Q ss_pred cceeeEeCCCeEEEEEeCCCCCCCceEEEEEC-CEEEEEEEEecccCCCceEEE----EEEEEEECCcCcccCCc-EEEe
Q psy14967 66 GVSNITNEENKVQVILDVQQFSPNEISIKTVD-GFILVEGKHEEKEDEHGFISR----QFKRRYLLPKDVEIEKV-TSSL 139 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~-~~L~I~g~~~~~~~~~~~~~r----~F~r~~~LP~~vd~~~i-~A~~ 139 (168)
|++||++++++|.|.++|||++++||+|++++ +.|+|+|+++... +.+|..+ +|.|+|.||.+||.++| +|+|
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~-~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~ 103 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE-PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY 103 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC-CSCEEEECSCSEEEEEEECSSEECTTCCCEEEE
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC-CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE
Confidence 67999999999999999999999999999999 9999999987654 4456554 89999999999999999 9999
Q ss_pred CCCCEEEEEEcCcCCCC
Q psy14967 140 SSDGVLTITAPKRVSTR 156 (168)
Q Consensus 140 ~~~GiL~I~~PK~~~~~ 156 (168)
+||+|+|++||.++.+
T Consensus 104 -~~GvL~I~lPK~~~~~ 119 (123)
T 3aab_A 104 -ENGVLTIRIPIAGTSV 119 (123)
T ss_dssp -ETTEEEEEEEGGGEEC
T ss_pred -cCCEEEEEEEcCCCCc
Confidence 5999999999987664
No 9
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.92 E-value=1.4e-24 Score=152.13 Aligned_cols=90 Identities=24% Similarity=0.493 Sum_probs=77.8
Q ss_pred CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEeccc--CCCceEE-----EEEEEEEECCcCcccCCcEE
Q psy14967 65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE--DEHGFIS-----RQFKRRYLLPKDVEIEKVTS 137 (168)
Q Consensus 65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~--~~~~~~~-----r~F~r~~~LP~~vd~~~i~A 137 (168)
.|++||++++++|.|.++|||++++||+|+++++.|+|+|+++... .+..|.+ ++|+|+|.||.+||.++|+|
T Consensus 4 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~A 83 (100)
T 3gla_A 4 VPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGITA 83 (100)
T ss_dssp CCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCEE
T ss_pred cCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeEE
Confidence 4789999999999999999999999999999999999999987643 2233443 58999999999999999999
Q ss_pred EeCCCCEEEEEEcCcCCC
Q psy14967 138 SLSSDGVLTITAPKRVST 155 (168)
Q Consensus 138 ~~~~~GiL~I~~PK~~~~ 155 (168)
+| +||+|+|++||.+++
T Consensus 84 ~~-~~GvL~I~~pK~~~a 100 (100)
T 3gla_A 84 AG-RNGVLEIRIPKRPAA 100 (100)
T ss_dssp EE-ETTEEEEEEEBC---
T ss_pred EE-eCCEEEEEEecCCCC
Confidence 99 599999999998753
No 10
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.92 E-value=2.3e-24 Score=151.79 Aligned_cols=92 Identities=22% Similarity=0.294 Sum_probs=80.6
Q ss_pred CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccC--CCceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967 65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKED--EHGFISRQFKRRYLLPKDVEIEKVTSSLSSD 142 (168)
Q Consensus 65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~--~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~ 142 (168)
.|++||++++++|.|.++|||++++||+|+++++.|+|+|+++.... ..+...++|.|+|.||.+||.++|+|+| +|
T Consensus 6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~-~~ 84 (102)
T 4fei_A 6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASL-AG 84 (102)
T ss_dssp CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEE-ET
T ss_pred cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEE-EC
Confidence 47899999999999999999999999999999999999999864311 1123567999999999999999999999 59
Q ss_pred CEEEEEEcCcCCCCC
Q psy14967 143 GVLTITAPKRVSTRF 157 (168)
Q Consensus 143 GiL~I~~PK~~~~~~ 157 (168)
|+|+|++||++++..
T Consensus 85 GvL~I~lpK~~~~~d 99 (102)
T 4fei_A 85 GVLTVRFEKLRPTID 99 (102)
T ss_dssp TEEEEEEEBSSCCCC
T ss_pred CEEEEEEEccCcccc
Confidence 999999999887643
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=6.4e-22 Score=164.18 Aligned_cols=96 Identities=21% Similarity=0.316 Sum_probs=84.4
Q ss_pred CcceeeEeCCC----eEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeC
Q psy14967 65 SGVSNITNEEN----KVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLS 140 (168)
Q Consensus 65 ~p~~di~e~~~----~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~ 140 (168)
.|++||+|+++ +|.|+++||||++|||+|+++++.|+|+|+++.+. +.+..+++|.|+|.||++||.++|+|+|+
T Consensus 98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~-e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~ 176 (314)
T 2bol_A 98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVAC-GDAAMSESVGRSIPLPPSVDRNHIQATIT 176 (314)
T ss_dssp GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSST-TCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccC-CCCEEEEEEEEEEECCCCccccccEEEEe
Confidence 48899999999 99999999999999999999999999999987543 34577789999999999999999999993
Q ss_pred CCCEEEEEEcCcCCCCCeeeEE
Q psy14967 141 SDGVLTITAPKRVSTRFYFFSL 162 (168)
Q Consensus 141 ~~GiL~I~~PK~~~~~~~~i~i 162 (168)
.||||+|++||.++.. ++|+|
T Consensus 177 ~nGVL~I~lPK~~~~~-~~I~i 197 (314)
T 2bol_A 177 TDDVLVIEAPVNEPNY-KAIKL 197 (314)
T ss_dssp SSSEEEEEEEBSSCCT-TTEEE
T ss_pred CCCEEEEEEeccCccc-ceeec
Confidence 3999999999987664 44544
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.79 E-value=1.3e-19 Score=150.35 Aligned_cols=87 Identities=22% Similarity=0.406 Sum_probs=70.3
Q ss_pred cceeeEeCC---CeEEEEEeC-CCCCCCceEEEEECCEEEEEEEEecccCC---CceEEEEEEEEEECCcCcccCCcEEE
Q psy14967 66 GVSNITNEE---NKVQVILDV-QQFSPNEISIKTVDGFILVEGKHEEKEDE---HGFISRQFKRRYLLPKDVEIEKVTSS 138 (168)
Q Consensus 66 p~~di~e~~---~~~~v~~~l-pG~~~edi~V~v~~~~L~I~g~~~~~~~~---~~~~~r~F~r~~~LP~~vd~~~i~A~ 138 (168)
...+|.+++ +.|.|.++| ||++||||+|++++|.|+|+|+++.++++ .++.+++|+|+|.||++||+++|+|+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~ 300 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAE 300 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEE
Confidence 446676655 579999999 99999999999999999999998765432 23456799999999999999999999
Q ss_pred eCCCCEEEEEEcCcC
Q psy14967 139 LSSDGVLTITAPKRV 153 (168)
Q Consensus 139 ~~~~GiL~I~~PK~~ 153 (168)
| +||||+|++||.+
T Consensus 301 ~-~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 301 I-VDGLMVVEAPLFK 314 (314)
T ss_dssp E-ETTEEEEEEEEEC
T ss_pred E-eCCEEEEEEecCC
Confidence 9 5999999999863
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.07 E-value=4.4e-10 Score=79.66 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=72.2
Q ss_pred CcceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967 65 SGVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV 144 (168)
Q Consensus 65 ~p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi 144 (168)
.+..+++++++.+.|++++||+++++++|.+.++.|.|+++.. ++ ..|...+.|+..|++++.++++ .+|.
T Consensus 9 ~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~e~s~~~~-~~~~ 79 (114)
T 1rl1_A 9 KIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLP---SG-----EDYNLKLELLHPIIPEQSTFKV-LSTK 79 (114)
T ss_dssp CCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECT---TS-----SEEEEEECBSSCCCGGGEEEEE-CSSS
T ss_pred CCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC---CC-----cEEEEEeeCCCcCCccccEEEE-ECCE
Confidence 3668999999999999999999999999999999999998743 11 3688899999999999999999 5999
Q ss_pred EEEEEcCcCC
Q psy14967 145 LTITAPKRVS 154 (168)
Q Consensus 145 L~I~~PK~~~ 154 (168)
|+|+|+|+++
T Consensus 80 l~i~L~K~~~ 89 (114)
T 1rl1_A 80 IEIKLKKPEA 89 (114)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEEcCCC
Confidence 9999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.02 E-value=6.3e-10 Score=75.66 Aligned_cols=81 Identities=11% Similarity=0.021 Sum_probs=71.9
Q ss_pred cceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEE
Q psy14967 66 GVSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVL 145 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL 145 (168)
+..+++++++.+.|++.+||+.++++.|.+.++.|.|++... ++ ..|...+.|+..|++++.++++ .+|.|
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~---~~-----~~y~~~~~L~~~I~~~~s~~~~-~~~~l 73 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP---GE-----DAYYLQPRLFGKIIPDKCKYEV-LSTKI 73 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT---TS-----CCEEECCBBSSCBCGGGCEEEE-CSSCE
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC---CC-----cEEEEeeEcCCccCchhEEEEE-ECCEE
Confidence 568999999999999999999999999999999999998642 11 3688889999999999999999 59999
Q ss_pred EEEEcCcCCC
Q psy14967 146 TITAPKRVST 155 (168)
Q Consensus 146 ~I~~PK~~~~ 155 (168)
.|+|.|+++.
T Consensus 74 ~i~L~K~~~~ 83 (92)
T 2xcm_C 74 EICLAKADII 83 (92)
T ss_dssp EEEEEBSSSC
T ss_pred EEEEEcCCCC
Confidence 9999998653
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.14 E-value=3.2e-05 Score=54.69 Aligned_cols=79 Identities=14% Similarity=0.235 Sum_probs=67.9
Q ss_pred CcceeeEeCCCeEEEEEeCCCCC--CCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCc-ccCCcEEEeC-
Q psy14967 65 SGVSNITNEENKVQVILDVQQFS--PNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV-EIEKVTSSLS- 140 (168)
Q Consensus 65 ~p~~di~e~~~~~~v~~~lpG~~--~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~v-d~~~i~A~~~- 140 (168)
.|.-.|..+++.+.|.+.+|.++ ..++++.++++......+ -|.=++.||..+ |.+.-+|+|.
T Consensus 17 TP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~-------------PYyLRL~lP~~vved~~~~A~YD~ 83 (115)
T 3eud_A 17 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-------------PYYLRLRFPHELIDDERSTAQYDS 83 (115)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEET-------------TEEEEEECSSCEECSTTCEEEEET
T ss_pred CCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecC-------------CeEEEEecCcceecCCCcceEEeC
Confidence 36789999999999999999977 889999999999988763 466679999997 7788899986
Q ss_pred CCCEEEEEEcCcCCCC
Q psy14967 141 SDGVLTITAPKRVSTR 156 (168)
Q Consensus 141 ~~GiL~I~~PK~~~~~ 156 (168)
++|.++|++||..+.+
T Consensus 84 d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 84 KDECINVKVAKLNKNE 99 (115)
T ss_dssp TTTEEEEEEEESSTTC
T ss_pred CCcEEEEEEcCCcCCC
Confidence 5799999999987653
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.06 E-value=4.5e-06 Score=60.80 Aligned_cols=77 Identities=14% Similarity=0.232 Sum_probs=67.3
Q ss_pred cceeeEeCCCeEEEEEeCCCCC--CCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCc-ccCCcEEEeC-C
Q psy14967 66 GVSNITNEENKVQVILDVQQFS--PNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDV-EIEKVTSSLS-S 141 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lpG~~--~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~v-d~~~i~A~~~-~ 141 (168)
|.-.+..+++.+.|.+.+|..+ ..++++.+++..+..... .|.=++.||..| |.+.-+|+|. +
T Consensus 4 P~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~-------------PYyLRL~LP~~V~e~~~~kA~YD~d 70 (134)
T 2k8q_A 4 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLS-------------PYYLRLRFPHELIDDERSTAQYDSK 70 (134)
T ss_dssp SEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSS-------------SSCEEECCSSCEECCSSCEEEEETT
T ss_pred ceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecC-------------CeEEEecCCCeeecCCCcceeEecc
Confidence 6679999999999999999999 899999999998887753 455669999999 9999999996 4
Q ss_pred CCEEEEEEcCcCCC
Q psy14967 142 DGVLTITAPKRVST 155 (168)
Q Consensus 142 ~GiL~I~~PK~~~~ 155 (168)
.|.|+|++||..+.
T Consensus 71 ~~~~~VtLpK~~~G 84 (134)
T 2k8q_A 71 DECINVKVAKLNKN 84 (134)
T ss_dssp TTEEEEEEEESSTT
T ss_pred CCEEEEEEeCCCCC
Confidence 79999999997654
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.77 E-value=0.00027 Score=50.66 Aligned_cols=81 Identities=10% Similarity=0.150 Sum_probs=68.5
Q ss_pred cceeeEeCCCeEEEEEeCCCC---CCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEE-CCcCcccCCcEEEeCC
Q psy14967 66 GVSNITNEENKVQVILDVQQF---SPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYL-LPKDVEIEKVTSSLSS 141 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lpG~---~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~-LP~~vd~~~i~A~~~~ 141 (168)
+..+++.+.+.+.|.+.++|+ .++++.|++..+.|.|++.... + ..|.-.+. |-..|++++-+..+.
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~---~-----~~y~~~~~~L~~~I~~e~S~~~v~- 91 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN---G-----KSYSMIVNNLLKPISVEGSSKKVK- 91 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS---S-----SCEEEEEECBSSCCCTTTCEEEEE-
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC---C-----CcEEEEhHHhcCccCcccCEEEEe-
Confidence 467999999999999999999 8999999999999999884221 1 25667785 999999999999984
Q ss_pred CCEEEEEEcCcCCC
Q psy14967 142 DGVLTITAPKRVST 155 (168)
Q Consensus 142 ~GiL~I~~PK~~~~ 155 (168)
.+.+.|+|-|+++.
T Consensus 92 ~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 92 TDTVLILCRKKVEN 105 (127)
T ss_dssp TTEEEEEEECSSSS
T ss_pred CCEEEEEEEECCCC
Confidence 89999999998653
No 18
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.66 E-value=0.00023 Score=51.77 Aligned_cols=88 Identities=15% Similarity=0.099 Sum_probs=69.7
Q ss_pred CcceeeEeC-CCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEeccc-----CCCceEEEEEEEEEECCcCcccCCcEEE
Q psy14967 65 SGVSNITNE-ENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKE-----DEHGFISRQFKRRYLLPKDVEIEKVTSS 138 (168)
Q Consensus 65 ~p~~di~e~-~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~-----~~~~~~~r~F~r~~~LP~~vd~~~i~A~ 138 (168)
.+..+++++ .+.+.|++.++|+.+++++|++..+.|.|+.+..... ...+- ...|.-.+.|-..|++++-+.+
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~-~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGP-HTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCT-TSCEEEEEEBSSCEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCc-ceeEEEeccccccCCchhCEEE
Confidence 467899999 9999999999999999999999999999997532210 00000 0156677889999999998989
Q ss_pred eCCCCEEEEEEcCcCC
Q psy14967 139 LSSDGVLTITAPKRVS 154 (168)
Q Consensus 139 ~~~~GiL~I~~PK~~~ 154 (168)
+. .+.+.|+|.|++.
T Consensus 98 v~-~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 98 FT-ASRIDICLRKRQS 112 (134)
T ss_dssp EC-SSEEEEEEEESSS
T ss_pred Ee-CCEEEEEEEECCC
Confidence 84 8999999998754
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.64 E-value=0.0012 Score=47.04 Aligned_cols=80 Identities=15% Similarity=0.114 Sum_probs=65.8
Q ss_pred cceeeEeCCCeEEEEEeCC-CC-CCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCC
Q psy14967 66 GVSNITNEENKVQVILDVQ-QF-SPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG 143 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lp-G~-~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~G 143 (168)
|...++.+.+.+.|++.|| |. +++|+.|.+..+.|.|..+... + ..+.-...|...|+++.-.-++ .+|
T Consensus 20 ~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~---~-----~~~~~~~~L~~~I~~e~S~w~i-~~~ 90 (124)
T 1wgv_A 20 ENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN---G-----ERVLMEGKLTHKINTESSLWSL-EPG 90 (124)
T ss_dssp SSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS---S-----EEEEEEEEBSSCBCTTTCEEEE-CTT
T ss_pred CcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC---C-----CceEEcccccCcCCCcCCEEEE-eCC
Confidence 5689999999999999998 88 8999999999999999875311 1 1233557899999999999999 477
Q ss_pred E-EEEEEcCcCC
Q psy14967 144 V-LTITAPKRVS 154 (168)
Q Consensus 144 i-L~I~~PK~~~ 154 (168)
. |.|+|-|+.+
T Consensus 91 k~v~i~L~K~~~ 102 (124)
T 1wgv_A 91 KCVLVNLSKVGE 102 (124)
T ss_dssp SEEEEEECBSSS
T ss_pred CEEEEEEEECCC
Confidence 5 9999998753
No 20
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.51 E-value=0.00077 Score=48.11 Aligned_cols=78 Identities=9% Similarity=0.026 Sum_probs=66.6
Q ss_pred ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEE
Q psy14967 67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLT 146 (168)
Q Consensus 67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~ 146 (168)
.++.+.+.+.+.|++.+|+. ++++|.+..+.|.+++.... + + ..|.-.+.|-..|++++-+.++. ++.+.
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~--~-~----~~y~~~l~L~~~I~~e~S~~~v~-~~kie 74 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGS--D-N----FKHLNEIDLFHCIDPNDSKHKRT-DRSIL 74 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETT--T-T----EEEEEEEEBSSCEEEEEEEEEEC-SSCEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCC--C-C----ceEEEEEEccceeccccCEEEEC-CCEEE
Confidence 68999999999999999995 79999999999999986411 1 1 35788889999999999999994 88899
Q ss_pred EEEcCcCC
Q psy14967 147 ITAPKRVS 154 (168)
Q Consensus 147 I~~PK~~~ 154 (168)
|+|.|+++
T Consensus 75 i~L~K~~~ 82 (125)
T 1ejf_A 75 CCLRKGES 82 (125)
T ss_dssp EEEEESST
T ss_pred EEEEECCC
Confidence 99999864
No 21
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.40 E-value=0.00037 Score=58.70 Aligned_cols=70 Identities=17% Similarity=0.225 Sum_probs=58.2
Q ss_pred ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCC-cEEEeCCCCEE
Q psy14967 67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEK-VTSSLSSDGVL 145 (168)
Q Consensus 67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~-i~A~~~~~GiL 145 (168)
++.|... .|.+++.|||+++++|++.-.++.|+|+. +.|+|.+.||.....-. ..|.| +||.|
T Consensus 299 ~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~-------------g~~rR~i~LP~~L~~~~v~~A~~-~~~~L 362 (374)
T 3igf_A 299 PITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEA-------------GDQRRNIFLPPALSGRPITGAKF-QNNYL 362 (374)
T ss_dssp SEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEE-------------TTEEEEEECCTTTTTCCEEEEEE-ETTEE
T ss_pred CEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEE-------------CCEeecccCCHHHcCCCccccEE-ECCEE
Confidence 3444333 89999999999999999999999999997 47899999999976664 46778 69999
Q ss_pred EEEEcCc
Q psy14967 146 TITAPKR 152 (168)
Q Consensus 146 ~I~~PK~ 152 (168)
+|++-..
T Consensus 363 ~i~~~~~ 369 (374)
T 3igf_A 363 IISFLEH 369 (374)
T ss_dssp EEEECCC
T ss_pred EEEEehh
Confidence 9998543
No 22
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.36 E-value=0.0015 Score=46.81 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=63.3
Q ss_pred cceeeEeCCCeEEEEEeCC-C--CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967 66 GVSNITNEENKVQVILDVQ-Q--FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSD 142 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lp-G--~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~ 142 (168)
|...++.+.+.+.|++.|| | ++++++.|.+..+.|.|+.+... ..-...|...|+++.-.-++ .+
T Consensus 8 ~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~-----------~~~~~~L~~~I~~e~s~w~i-~~ 75 (131)
T 1wfi_A 8 PNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQP-----------PVVDGELYNEVKVEESSWLI-ED 75 (131)
T ss_dssp CSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSC-----------CSBCSCBSSCBCSTTCEEEE-ET
T ss_pred CcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCce-----------EEEecccccccccccCEEEE-cC
Confidence 4578999999999999999 6 89999999999999999874110 11234688899999999999 58
Q ss_pred C-EEEEEEcCcCC
Q psy14967 143 G-VLTITAPKRVS 154 (168)
Q Consensus 143 G-iL~I~~PK~~~ 154 (168)
| .|.|+|-|+.+
T Consensus 76 ~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 76 GKVVTVHLEKINK 88 (131)
T ss_dssp TTEEEEEEEBSSS
T ss_pred CCEEEEEEEECCC
Confidence 7 89999999865
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.25 E-value=0.0015 Score=46.98 Aligned_cols=75 Identities=16% Similarity=0.190 Sum_probs=61.6
Q ss_pred cceeeEeCCCeEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967 66 GVSNITNEENKVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV 144 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi 144 (168)
|...++.+.+.+.|++.|| |++++++.|.+..+.|.|.++ +. . .-...|...|+++.-.-++ .+|.
T Consensus 5 ~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~------g~-----~-~~~~~L~~~I~~e~S~w~i-~~~k 71 (131)
T 2o30_A 5 AKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ------GE-----I-VIDGELLHEVDVSSLWWVI-NGDV 71 (131)
T ss_dssp CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET------TE-----E-EEEEEBSSCEEEEEEEEEE-ETTE
T ss_pred CcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC------CE-----e-eEccccccccccccCEEEE-eCCE
Confidence 5678999999999999996 999999999999999999873 11 1 3456799999999888888 5888
Q ss_pred EEEEEcCcC
Q psy14967 145 LTITAPKRV 153 (168)
Q Consensus 145 L~I~~PK~~ 153 (168)
|.|+|-|+.
T Consensus 72 v~i~L~K~~ 80 (131)
T 2o30_A 72 VDVNVTKKR 80 (131)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEECC
Confidence 999999873
No 24
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.15 E-value=0.002 Score=45.76 Aligned_cols=77 Identities=14% Similarity=0.119 Sum_probs=63.3
Q ss_pred cceeeEeCCCeEEEEEeCC-C--CCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCC
Q psy14967 66 GVSNITNEENKVQVILDVQ-Q--FSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSD 142 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lp-G--~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~ 142 (168)
|...+..+.+.+.|++.|| | ++.+|+.|.+..+.|.|..+.. .+.-...|...|+++.-.-.+ .+
T Consensus 17 ~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~-----------~~~~~g~L~~~I~~deS~w~i-~~ 84 (121)
T 3qor_A 17 PNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQ-----------PAIIDGELYNEVKVEESSWLI-AD 84 (121)
T ss_dssp SSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTS-----------CCSEEEEBSSCBCGGGCEEEE-ET
T ss_pred CCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCc-----------ceEEeccccccccccccEEEE-cC
Confidence 5578999999999999999 4 7899999999999999876421 112345789999999989999 58
Q ss_pred C-EEEEEEcCcCC
Q psy14967 143 G-VLTITAPKRVS 154 (168)
Q Consensus 143 G-iL~I~~PK~~~ 154 (168)
| .|.|+|-|...
T Consensus 85 ~~~i~i~L~K~~~ 97 (121)
T 3qor_A 85 GAVVTVHLEKINK 97 (121)
T ss_dssp TTEEEEEEEBSSS
T ss_pred CCEEEEEEEECCC
Confidence 7 99999998754
No 25
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.14 E-value=0.0011 Score=49.03 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=64.5
Q ss_pred cceeeEeCCCeEEEEEeCCCCCCCceEEEEE-CCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967 66 GVSNITNEENKVQVILDVQQFSPNEISIKTV-DGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV 144 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lpG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi 144 (168)
|.++++.+.+.+.|++.+++. ++++|++. .+.|.+++. . .++ ..|.-.+.|=..|+++ -+.+.+ ...
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~--~~~-----~~y~~~l~L~~~Idpe-S~~~v~-~~k 72 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G--AQG-----ERFEFSLELYGKIMTE-YRKNVG-LRN 72 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T--TTT-----EEEEEEEEBSSCEEEE-EEEEEE-SSS
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c--CCC-----ceEEEEeEhhhccccc-ceEEec-CCE
Confidence 678999999999999999997 58999999 789999986 1 111 4678888999999999 777774 788
Q ss_pred EEEEEcCcCC
Q psy14967 145 LTITAPKRVS 154 (168)
Q Consensus 145 L~I~~PK~~~ 154 (168)
+.|+|.|+++
T Consensus 73 Iei~L~K~e~ 82 (150)
T 2kmw_A 73 IIFSIQKEER 82 (150)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEECCC
Confidence 9999998764
No 26
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.12 E-value=0.0026 Score=47.27 Aligned_cols=76 Identities=12% Similarity=-0.004 Sum_probs=64.1
Q ss_pred cceeeEeCCCeEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCE
Q psy14967 66 GVSNITNEENKVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGV 144 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~Gi 144 (168)
|...++.+.+.+.|++.|| |+++++|.|.+..+.|.|+.+. . . .-...|...|+++.-.-++ .+|.
T Consensus 14 ~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg--------~---~-~l~g~L~~~I~~eeS~w~i-~~~k 80 (157)
T 2rh0_A 14 PWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG--------R---E-ILKGKLFDSTIADEGTWTL-EDRK 80 (157)
T ss_dssp SSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT--------E---E-EEEEEBSSCBCGGGCEEEE-ECCC
T ss_pred CcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC--------E---E-EEeeccccccCccccEEEE-cCCc
Confidence 5689999999999999998 8999999999999999998731 1 1 2456799999999999999 4774
Q ss_pred -EEEEEcCcCC
Q psy14967 145 -LTITAPKRVS 154 (168)
Q Consensus 145 -L~I~~PK~~~ 154 (168)
|.|+|-|+.+
T Consensus 81 ~v~I~L~K~~~ 91 (157)
T 2rh0_A 81 MVRIVLTKTKR 91 (157)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEEEcCC
Confidence 9999999865
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.0004 Score=50.32 Aligned_cols=84 Identities=10% Similarity=0.107 Sum_probs=60.5
Q ss_pred cceeeEeCCCe-------EEEEEeCCCCCCCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEE
Q psy14967 66 GVSNITNEENK-------VQVILDVQQFSPNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSS 138 (168)
Q Consensus 66 p~~di~e~~~~-------~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~ 138 (168)
|.+..+.+.+. +.|++.+|+.+ +++|.+..+.|.+++...... ++.....|.-.+.|...|++++-+.+
T Consensus 7 p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~--g~~~~~~y~~~l~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 7 PQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHV--GDENVHHYQLHIDLYKEIIPEKTMHK 82 (134)
T ss_dssp ----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC---------CEEBCEEEECSSCCCSSSEEEE
T ss_pred CCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEeccccc--CCccCceEEEEEEChhhccccccEEE
Confidence 45666666655 99999999974 899999999999997643200 00001467888999999999999999
Q ss_pred eCCCCE-EEEEEcCcCC
Q psy14967 139 LSSDGV-LTITAPKRVS 154 (168)
Q Consensus 139 ~~~~Gi-L~I~~PK~~~ 154 (168)
+. ++. +.|+|.|+++
T Consensus 83 v~-~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 83 VA-NGQHYFLKLYKKDL 98 (134)
T ss_dssp EC-CC--CEEEEEECSS
T ss_pred EC-CCEEEEEEEEECCC
Confidence 95 888 9999999873
No 28
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=78.60 E-value=7.9 Score=25.68 Aligned_cols=33 Identities=12% Similarity=0.033 Sum_probs=27.2
Q ss_pred EEEEEeCC-CCCCCceEEEEECCEEEEEEEEecc
Q psy14967 77 VQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEK 109 (168)
Q Consensus 77 ~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~ 109 (168)
|.=.+.|| +++++.++-++++|.|+|+-.+.+.
T Consensus 63 f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 44467899 6999999999999999999976543
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=78.14 E-value=3.1 Score=26.92 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=28.8
Q ss_pred EEEEEEECCcCcccCCcEEEeCCCCEEEEEEcCcCC
Q psy14967 119 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRVS 154 (168)
Q Consensus 119 ~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK~~~ 154 (168)
.|.-.+.|| +++++.|+..+ .+|.|+|+.-+...
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKT-KDGVVEITGKHAAR 41 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEE-ETTEEEEEEEEC--
T ss_pred EEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEccc
Confidence 688889999 79999999999 59999999976543
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=70.83 E-value=8.6 Score=25.20 Aligned_cols=32 Identities=6% Similarity=0.105 Sum_probs=27.6
Q ss_pred eEEEEEeCC-CCCCCceEEEEECCEEEEEEEEe
Q psy14967 76 KVQVILDVQ-QFSPNEISIKTVDGFILVEGKHE 107 (168)
Q Consensus 76 ~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~ 107 (168)
.|.-.+.|| +++++.++-++++|.|+|+--+.
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETTEEEEEEEBC
T ss_pred EEEEEEECCCCcChHHeEEEEeCCEEEEEEecC
Confidence 567788999 58999999999999999998654
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=68.34 E-value=6.2 Score=25.61 Aligned_cols=33 Identities=9% Similarity=0.162 Sum_probs=28.7
Q ss_pred EEEEEEECCcCcccCCcEEEeCCCCEEEEEEcCcC
Q psy14967 119 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRV 153 (168)
Q Consensus 119 ~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK~~ 153 (168)
.|.-.+.|| +++.++|+..+ .+|.|+|+.-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 578889999 89999999999 5999999997643
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=64.68 E-value=7.8 Score=25.76 Aligned_cols=33 Identities=9% Similarity=0.094 Sum_probs=28.8
Q ss_pred EEEEEEECCcCcccCCcEEEeCCCCEEEEEEcCcC
Q psy14967 119 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPKRV 153 (168)
Q Consensus 119 ~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK~~ 153 (168)
.|.-.+.|| +++.+.|+..+ .+|.|+|+.-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKV-VGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 577789999 89999999999 5999999997654
No 33
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=64.30 E-value=14 Score=26.59 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=28.1
Q ss_pred eEEEEEeCC-CCCCCceEEEEECCEEEEEEEEecc
Q psy14967 76 KVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEEK 109 (168)
Q Consensus 76 ~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~~ 109 (168)
.|.=.+.|| +++++.|+-++++|.|+|+.-+.+.
T Consensus 118 ~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 118 EIYRTIKLPATVKEENASAKFENGVLSVILPKAES 152 (161)
T ss_dssp EEEEEEECSSCBCGGGCEEEEETTEEEEEEEBCGG
T ss_pred cEEEEEECCCCcccccEEEEEECCEEEEEEEcCCC
Confidence 455567898 7999999999999999999976543
No 34
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=64.23 E-value=11 Score=25.74 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=28.4
Q ss_pred EEEEEEECCcCcccCCcEEEeCCC-CEEEEEEcCcCCC
Q psy14967 119 QFKRRYLLPKDVEIEKVTSSLSSD-GVLTITAPKRVST 155 (168)
Q Consensus 119 ~F~r~~~LP~~vd~~~i~A~~~~~-GiL~I~~PK~~~~ 155 (168)
.|.-.+.|| +++.++|+..+ .+ |.|+|+.-+....
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v-~~~~~L~I~g~~~~~~ 70 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARV-SGQNELIIEAEREITE 70 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEE-ETTTEEEEEEECCCCC
T ss_pred EEEEEEECC-CCCHHHEEEEE-eCCCEEEEEEEEeccC
Confidence 456667888 79999999999 48 9999999876543
No 35
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=61.71 E-value=13 Score=24.83 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=28.6
Q ss_pred EEEEEeCC-CCCCCceEEEE-ECCEEEEEEEEecc
Q psy14967 77 VQVILDVQ-QFSPNEISIKT-VDGFILVEGKHEEK 109 (168)
Q Consensus 77 ~~v~~~lp-G~~~edi~V~v-~~~~L~I~g~~~~~ 109 (168)
|.=.+.|| +++++.|+-++ .+|.|+|+.-+...
T Consensus 57 F~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~ 91 (106)
T 3l1e_A 57 FHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPS 91 (106)
T ss_dssp EEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCC
T ss_pred EEEEEECCCCcChhHcEEEECCCCEEEEEEEccCc
Confidence 66678999 79999999999 79999999976544
No 36
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=58.01 E-value=5.6 Score=25.32 Aligned_cols=23 Identities=35% Similarity=0.795 Sum_probs=20.3
Q ss_pred CCCCCCceEEEEECCEEEEEEEE
Q psy14967 84 QQFSPNEISIKTVDGFILVEGKH 106 (168)
Q Consensus 84 pG~~~edi~V~v~~~~L~I~g~~ 106 (168)
=-|+.+.|.+.+..+.|+|+|+.
T Consensus 16 ~sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 16 QSFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EEECSSEEEEEETTEEEEEEEEC
T ss_pred EEECCCEEEEEeCceEEEEEcCC
Confidence 34789999999999999999974
No 37
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=56.22 E-value=9.8 Score=25.64 Aligned_cols=18 Identities=22% Similarity=0.510 Sum_probs=16.2
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.|+|+|.
T Consensus 20 P~gV~V~i~~~~VtVKGP 37 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGP 37 (100)
T ss_dssp CSSCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 578899999999999995
No 38
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=53.98 E-value=17 Score=25.49 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=20.8
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEEEe
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSLKL 164 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i~~ 164 (168)
++-.+..||+|.|++--+...+...+.|+.
T Consensus 102 Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~ 131 (135)
T 1q5l_A 102 VTFDIDADGILHVSAKDKNSGKEQKITIKA 131 (135)
T ss_dssp EEEEECTTSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEECCCCEEEEEEEECCCCCEEEEEEec
Confidence 444566899999999655556666666653
No 39
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=53.64 E-value=25 Score=25.02 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=27.5
Q ss_pred eEEEEEeCC-CCCCCceEEEEECCEEEEEEEEec
Q psy14967 76 KVQVILDVQ-QFSPNEISIKTVDGFILVEGKHEE 108 (168)
Q Consensus 76 ~~~v~~~lp-G~~~edi~V~v~~~~L~I~g~~~~ 108 (168)
.|.=.+.|| +++.+.|+-++++|.|+|+-.+..
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETTEEEEEEECCC
T ss_pred EEEEEEECCCCccccceEEEEECCEEEEEEEccC
Confidence 355577898 789999999999999999997644
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=51.98 E-value=32 Score=25.51 Aligned_cols=45 Identities=22% Similarity=0.493 Sum_probs=31.4
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEcC
Q psy14967 88 PNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPK 151 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK 151 (168)
|+.++|+++++.++|+|.+ ++.++.+ +.. |.... +||.|+|+.+.
T Consensus 11 P~gV~V~i~~~~VtVkGpk-----------G~L~~~~--~~~-----v~i~~-~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK-----------GELTRTF--HPD-----MTITV-EGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEETTEEEEEETT-----------EEEEEEC--CTT-----CEEEE-ETTEEEEECSC
T ss_pred CCCCEEEEeCCEEEEECCC-----------eEEEEEc--CCC-----EEEEE-eCCEEEEEcCC
Confidence 5788999999999999953 2333433 444 44556 59998888654
No 41
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=51.83 E-value=36 Score=26.10 Aligned_cols=45 Identities=20% Similarity=0.446 Sum_probs=30.6
Q ss_pred CCceEEEEECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCCEEEEEEcC
Q psy14967 88 PNEISIKTVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDGVLTITAPK 151 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~PK 151 (168)
|+.++|+++++.++|+|.+- +.++.+ +.. |.... +||.|+|+.+.
T Consensus 39 P~gV~V~i~~~~VtVKGPkG-----------~L~~~~--~~~-----v~i~~-e~~~i~v~~~~ 83 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPKG-----------ELTVPY--NTE-----LTVRQ-DGDQLLVERPS 83 (212)
T ss_pred CCCcEEEEeCCEEEEECCCE-----------EEEEEC--CCC-----eEEEE-ECCEEEEEcCC
Confidence 57889999999999999532 333333 433 44456 58888887654
No 42
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=48.09 E-value=21 Score=26.31 Aligned_cols=32 Identities=19% Similarity=0.356 Sum_probs=26.5
Q ss_pred EEEEEeCC-CCCCCceEEEE-ECCEEEEEEEEec
Q psy14967 77 VQVILDVQ-QFSPNEISIKT-VDGFILVEGKHEE 108 (168)
Q Consensus 77 ~~v~~~lp-G~~~edi~V~v-~~~~L~I~g~~~~ 108 (168)
|.=++.|| +++++.|+-++ ++|.|+|+.-+.+
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~ 151 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQ 151 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTTSCEEEEEECC-
T ss_pred EEEEEECCCCcChhHeEEEEcCCCEEEEEEECCC
Confidence 45567898 79999999999 6999999997643
No 43
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=44.97 E-value=27 Score=24.94 Aligned_cols=29 Identities=21% Similarity=0.381 Sum_probs=20.9
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEEE
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSLK 163 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i~ 163 (168)
|+-.+..||+|.|++--....+...+.|.
T Consensus 85 Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~ 113 (152)
T 3h0x_A 85 VTFALDANGILKVSATDKGTGKSESITIT 113 (152)
T ss_dssp EEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEcCCCEEEEEEEEcCCCcEeEEEEe
Confidence 55556689999999976555666666665
No 44
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=44.18 E-value=28 Score=24.86 Aligned_cols=29 Identities=17% Similarity=0.339 Sum_probs=20.9
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEEE
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSLK 163 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i~ 163 (168)
|+-.+..||+|.|++--+...+...+.|.
T Consensus 85 Vtf~iD~nGiL~Vsa~d~~tg~~~~i~I~ 113 (151)
T 3dqg_A 85 VTFDIDANGIVNVSARDRGTGKEQQIVIQ 113 (151)
T ss_dssp EEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEeccCcEEEEEEEEccCCCEeEEEEe
Confidence 55556689999999976555666666665
No 45
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=43.76 E-value=27 Score=23.28 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=29.9
Q ss_pred CCeEEEEEeCCC-CCCCceEEEEECCEEEEEEEEec
Q psy14967 74 ENKVQVILDVQQ-FSPNEISIKTVDGFILVEGKHEE 108 (168)
Q Consensus 74 ~~~~~v~~~lpG-~~~edi~V~v~~~~L~I~g~~~~ 108 (168)
+..|.+.++|++ +++++-+.++.++.|.|.=++.+
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcCC
Confidence 567999999986 79999999999999999887653
No 46
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=42.55 E-value=17 Score=25.48 Aligned_cols=25 Identities=16% Similarity=0.185 Sum_probs=21.7
Q ss_pred CCCCCCCceEEEEECCEEEEEEEEe
Q psy14967 83 VQQFSPNEISIKTVDGFILVEGKHE 107 (168)
Q Consensus 83 lpG~~~edi~V~v~~~~L~I~g~~~ 107 (168)
.|..++-.|.|.++++.++++|.-.
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp 26 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFP 26 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEES
T ss_pred CCcccceeEEEEEECCEEEEEEECC
Confidence 4778888999999999999999743
No 47
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=38.26 E-value=27 Score=25.04 Aligned_cols=29 Identities=17% Similarity=0.415 Sum_probs=20.6
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEEE
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSLK 163 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i~ 163 (168)
|+-.+..||+|.|++--+...+..+|.|.
T Consensus 85 Vtf~iD~nGiL~Vsa~d~~tg~~~~i~I~ 113 (152)
T 3dob_A 85 VTFNIDANGILNVSAEDKSTGKSNRITIQ 113 (152)
T ss_dssp EEEEECTTCCEEEEEEETTTCCEEEEEEC
T ss_pred EEEEeCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 55556689999999976555566666664
No 48
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=37.59 E-value=21 Score=21.08 Aligned_cols=23 Identities=26% Similarity=0.294 Sum_probs=19.0
Q ss_pred CCCceEEEEECCEEEEEEEEecc
Q psy14967 87 SPNEISIKTVDGFILVEGKHEEK 109 (168)
Q Consensus 87 ~~edi~V~v~~~~L~I~g~~~~~ 109 (168)
.-+||.|.-+++.++|.|+-+..
T Consensus 31 gyndinvtwdgdtvtvegqlegg 53 (62)
T 2gjh_A 31 GYNDINVTWDGDTVTVEGQLEGG 53 (62)
T ss_dssp TCCSCEEEECSSCEEEEEECCCC
T ss_pred CcccceeEEcCCEEEEEeEEcCC
Confidence 45799999999999999986543
No 49
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=35.48 E-value=38 Score=22.02 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=18.5
Q ss_pred CCCCceEEEEECCEEEEEEEEec
Q psy14967 86 FSPNEISIKTVDGFILVEGKHEE 108 (168)
Q Consensus 86 ~~~edi~V~v~~~~L~I~g~~~~ 108 (168)
+.-+||.|..+++.++|.|+-+.
T Consensus 74 lgyndinvtfdgdtvtvegqleg 96 (106)
T 1qys_A 74 LGYNDINVTFDGDTVTVEGQLEG 96 (106)
T ss_dssp TTCCEEEEEEETTEEEEEEEC--
T ss_pred hCCcceeEEEcCCeEEEEeEEcC
Confidence 45589999999999999998654
No 50
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=32.69 E-value=34 Score=25.34 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=20.2
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEEE
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSLK 163 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i~ 163 (168)
|+-.+..||+|.|++--+...+..+|.|.
T Consensus 105 Vtf~iD~nGiL~VsA~d~~tg~~~~i~I~ 133 (182)
T 3n8e_A 105 VTFDIDANGIVHVSAKDKGTGREQQIVIQ 133 (182)
T ss_dssp EEEEECTTCCEEEEEEETTTCCEEEEEES
T ss_pred EEEEEecCCEEEEEEEEcCCCCEeeEEEe
Confidence 55556689999999975555555555554
No 51
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=32.07 E-value=38 Score=23.89 Aligned_cols=28 Identities=18% Similarity=0.318 Sum_probs=17.9
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEE
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSL 162 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i 162 (168)
|+-.+..||+|.|++--....+...+.|
T Consensus 85 V~f~id~nGiL~V~a~d~~tg~~~~i~i 112 (152)
T 2op6_A 85 VTFEIDVNGILHVSAEDKGTGNKNKLTI 112 (152)
T ss_dssp EEEEECTTSCEEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCcEEEEEEEEecCCcEEEEEe
Confidence 4555668999999996444444444444
No 52
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=30.54 E-value=39 Score=25.31 Aligned_cols=18 Identities=22% Similarity=0.547 Sum_probs=16.4
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (188)
T 4a17_E 13 PDKVTITAKQRVVEVKGP 30 (188)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCcEEEEeCCEEEEEcC
Confidence 688999999999999994
No 53
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=30.42 E-value=40 Score=25.07 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=15.9
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.++|+|.
T Consensus 9 P~gV~v~i~~~~vtVkGp 26 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGD 26 (178)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 578899999999999994
No 54
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=30.41 E-value=57 Score=22.78 Aligned_cols=16 Identities=38% Similarity=0.592 Sum_probs=14.0
Q ss_pred cEEEeCCCCEEEEEEcC
Q psy14967 135 VTSSLSSDGVLTITAPK 151 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK 151 (168)
+.+.+ .+|||+|+++.
T Consensus 49 ~Dve~-~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVEL-SHGVMTLEIPA 64 (123)
T ss_dssp CEEEE-CSSEEEEECTT
T ss_pred eEEEc-cCCEEEEEECC
Confidence 78999 59999999974
No 55
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=30.31 E-value=39 Score=25.35 Aligned_cols=18 Identities=17% Similarity=0.412 Sum_probs=16.1
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGP 30 (191)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCcEEEEeCCEEEEEcC
Confidence 678999999999999994
No 56
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=30.04 E-value=40 Score=25.28 Aligned_cols=18 Identities=22% Similarity=0.565 Sum_probs=16.0
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~v~i~~~~V~VkGP 30 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGP 30 (190)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 678999999999999994
No 57
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=29.66 E-value=84 Score=21.33 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=27.6
Q ss_pred eEeCCCeEEEEEeC-CCCCCCceEEEEECCEEEEEEE
Q psy14967 70 ITNEENKVQVILDV-QQFSPNEISIKTVDGFILVEGK 105 (168)
Q Consensus 70 i~e~~~~~~v~~~l-pG~~~edi~V~v~~~~L~I~g~ 105 (168)
+...++.+.|.+.+ ||-+.+.| ..+.++.|.|+-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~ 43 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAIT 43 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECC
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEe
Confidence 56678889998887 89888887 4577888888764
No 58
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=29.60 E-value=31 Score=23.34 Aligned_cols=17 Identities=35% Similarity=0.563 Sum_probs=14.4
Q ss_pred CcEEEeCCCCEEEEEEcC
Q psy14967 134 KVTSSLSSDGVLTITAPK 151 (168)
Q Consensus 134 ~i~A~~~~~GiL~I~~PK 151 (168)
.+.+.+ .+|||+|+++.
T Consensus 29 d~D~e~-~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEI-NGGVLTITFEN 45 (106)
T ss_dssp CCEEEE-ETTEEEEECTT
T ss_pred CEeeec-cCCEEEEEECC
Confidence 488999 59999999973
No 59
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=29.39 E-value=41 Score=25.50 Aligned_cols=29 Identities=28% Similarity=0.425 Sum_probs=20.3
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEEE
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSLK 163 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i~ 163 (168)
|+-.+..||+|.|++--....+...|.|.
T Consensus 86 Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~ 114 (219)
T 4e81_A 86 VTFDIDADGILHVSAKDKNSGKEQKITIK 114 (219)
T ss_dssp EEEEECTTCCEEEEEEETTTCCEEEEEEC
T ss_pred EEEEeCCCCCEeeeeeccccCccceEeee
Confidence 45556689999999976555555556553
No 60
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=29.01 E-value=34 Score=25.42 Aligned_cols=18 Identities=28% Similarity=0.586 Sum_probs=15.5
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.++|+|.
T Consensus 12 P~gV~v~i~~~~v~VkGp 29 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGP 29 (180)
T ss_dssp CTTCEEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeC
Confidence 678899999999999984
No 61
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=28.90 E-value=47 Score=25.35 Aligned_cols=41 Identities=5% Similarity=-0.016 Sum_probs=28.8
Q ss_pred ceeeEeCCCeEEEEEeCCCCCCCceEEEEECCEEEEEEEEe
Q psy14967 67 VSNITNEENKVQVILDVQQFSPNEISIKTVDGFILVEGKHE 107 (168)
Q Consensus 67 ~~di~e~~~~~~v~~~lpG~~~edi~V~v~~~~L~I~g~~~ 107 (168)
.+.+...++...|+++.+.=-.+.|++++++++|.|+-+..
T Consensus 33 ~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~~ 73 (250)
T 3jx8_A 33 DFEYEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKSI 73 (250)
T ss_dssp EEEEEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECBC
T ss_pred EEEEEECCCCceEEEEECccccceEEEEEECCEEEEEEcCC
Confidence 34555554466666666544467899999999999987644
No 62
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=28.48 E-value=44 Score=25.07 Aligned_cols=18 Identities=22% Similarity=0.510 Sum_probs=16.1
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.++|+|.
T Consensus 13 P~gV~V~i~~~~VtVkGp 30 (192)
T 2zkr_e 13 PENVDITLKGRTVIVKGP 30 (192)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEeCCEEEEECC
Confidence 678999999999999994
No 63
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=28.26 E-value=60 Score=22.33 Aligned_cols=30 Identities=3% Similarity=0.193 Sum_probs=23.4
Q ss_pred EEEEEEECCcCcccCCcEEEeCCCCEEEEEE
Q psy14967 119 QFKRRYLLPKDVEIEKVTSSLSSDGVLTITA 149 (168)
Q Consensus 119 ~F~r~~~LP~~vd~~~i~A~~~~~GiL~I~~ 149 (168)
.-.-.|.||.+++.+++...++ ..-|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMV-GKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEE-TTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEEE-CCEEEEEE
Confidence 4567889999999999999995 88899988
No 64
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=26.00 E-value=64 Score=25.33 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=24.2
Q ss_pred CCCceEEEEECCEEEEEEEEecc---cCCCceEEEEEEEEEECCcC
Q psy14967 87 SPNEISIKTVDGFILVEGKHEEK---EDEHGFISRQFKRRYLLPKD 129 (168)
Q Consensus 87 ~~edi~V~v~~~~L~I~g~~~~~---~~~~~~~~r~F~r~~~LP~~ 129 (168)
.++++.| +++.|+|++.+... .....+..+.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G~L~L~~~k~tsa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQGSLTIWLDSTSGSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETTEEEEEECSSCCEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECCEEEEEEecCCCCEEEECceEeeEEEEEEEEeCCC
Confidence 4555555 67777777654321 00123455788889999875
No 65
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.03 E-value=34 Score=25.55 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=15.3
Q ss_pred CCceEEEEECCEEEEEEE
Q psy14967 88 PNEISIKTVDGFILVEGK 105 (168)
Q Consensus 88 ~edi~V~v~~~~L~I~g~ 105 (168)
|+.++|+++++.++|+|.
T Consensus 14 P~gV~v~i~~~~V~VkGp 31 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGP 31 (184)
T ss_dssp CSSCEEEESSSEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcC
Confidence 578899999999999984
No 66
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=23.41 E-value=66 Score=24.35 Aligned_cols=29 Identities=28% Similarity=0.340 Sum_probs=18.3
Q ss_pred cEEEeCCCCEEEEEEcCcCCCCCeeeEEE
Q psy14967 135 VTSSLSSDGVLTITAPKRVSTRFYFFSLK 163 (168)
Q Consensus 135 i~A~~~~~GiL~I~~PK~~~~~~~~i~i~ 163 (168)
|+..+..||+|.|++--....+...++|+
T Consensus 83 Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~ 111 (227)
T 1u00_A 83 VTFQVDADGLLSVTAMEKSTGVEASIQVK 111 (227)
T ss_dssp EEEEECTTCCEEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcEEEEeecccccccceEEEE
Confidence 44456689999999864444444455543
No 67
>3qzm_A Iron-regulated surface determinant protein A; heme, transport, uptake, receptor, cell WALL, metal BI protein; HET: HEM; 1.25A {Staphylococcus aureus subsp} SCOP: b.1.28.1 PDB: 2ite_A* 2itf_A* 3qzo_A* 3qzp_A* 3qzl_A* 3qzn_A*
Probab=22.29 E-value=1.1e+02 Score=21.26 Aligned_cols=84 Identities=14% Similarity=0.082 Sum_probs=45.0
Q ss_pred cceeeEeCCCeEEEEEeCCCCC-CCceEEE-EECCEEEEEEEEecccCCCceEEEEEEEEEECCcCcccCCcEEEeCCCC
Q psy14967 66 GVSNITNEENKVQVILDVQQFS-PNEISIK-TVDGFILVEGKHEEKEDEHGFISRQFKRRYLLPKDVEIEKVTSSLSSDG 143 (168)
Q Consensus 66 p~~di~e~~~~~~v~~~lpG~~-~edi~V~-v~~~~L~I~g~~~~~~~~~~~~~r~F~r~~~LP~~vd~~~i~A~~~~~G 143 (168)
.+..+...++++.|++.|..-+ -..++|. ..|..+-++--.+.. ... .|.+.+|-. .+++.+ ++
T Consensus 33 kPA~v~v~ngk~~v~~tl~~s~wik~f~v~~~~g~~v~~~vvs~d~-~~n-------tr~v~F~v~----dl~~~i--~a 98 (127)
T 3qzm_A 33 HPGKVIKQNNKYYFQTVLNNASFWKEYKFYNANNQELATTVVNDNK-KAD-------TRTINVAVE----PGYKSL--TT 98 (127)
T ss_dssp SSEEEEEETTEEEEEEEEESGGGEEEEEEECTTCCEECEEEEEEET-TTT-------EEEEEEEEC----TTCCEE--EE
T ss_pred CCEEEEEECCEEEEEEEEechhheeeeEEeccCCcEEeeEEEeccc-CCC-------EEEEEEEec----CCCceE--EE
Confidence 3467888889999999886432 2345553 223344333221211 111 344555533 355666 67
Q ss_pred EEEEEEcCcCCCCCeeeEEE
Q psy14967 144 VLTITAPKRVSTRFYFFSLK 163 (168)
Q Consensus 144 iL~I~~PK~~~~~~~~i~i~ 163 (168)
.+.|.+|...-...+.+.|+
T Consensus 99 kv~V~Vp~i~Ydh~Y~v~~~ 118 (127)
T 3qzm_A 99 KVHIVVPQINYNHRYTTHLE 118 (127)
T ss_dssp EEEEEEGGGTEEEEEEEEEE
T ss_pred EEEEEeCCcCCcceeeEEEE
Confidence 78899987544444434333
Done!