Query psy14971
Match_columns 156
No_of_seqs 181 out of 1661
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 17:15:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r18_A Protein-L-isoaspartate( 99.7 6.7E-18 2.3E-22 129.1 10.3 121 2-127 96-227 (227)
2 3lbf_A Protein-L-isoaspartate 99.7 3E-17 1E-21 123.5 12.8 119 2-131 89-208 (210)
3 1i1n_A Protein-L-isoaspartate 99.7 2.4E-17 8.3E-22 125.5 12.3 124 2-130 89-218 (226)
4 1jg1_A PIMT;, protein-L-isoasp 99.7 4.4E-17 1.5E-21 125.3 12.6 127 1-135 102-229 (235)
5 2pbf_A Protein-L-isoaspartate 99.7 4.3E-17 1.5E-21 124.2 10.9 121 2-129 92-226 (227)
6 2yxe_A Protein-L-isoaspartate 99.7 5.2E-16 1.8E-20 117.1 13.4 124 2-133 89-213 (215)
7 1vbf_A 231AA long hypothetical 99.6 1.4E-14 4.7E-19 110.4 11.2 133 2-145 82-214 (231)
8 1dl5_A Protein-L-isoaspartate 99.5 8.9E-14 3E-18 111.7 11.5 123 2-130 87-211 (317)
9 3e05_A Precorrin-6Y C5,15-meth 99.4 4E-13 1.4E-17 100.6 9.4 140 1-145 51-193 (204)
10 3njr_A Precorrin-6Y methylase; 99.4 4.3E-13 1.5E-17 101.4 6.4 131 1-140 66-198 (204)
11 3hm2_A Precorrin-6Y C5,15-meth 99.3 9.6E-13 3.3E-17 95.7 5.5 135 2-144 37-175 (178)
12 3fpf_A Mtnas, putative unchara 99.3 1E-11 3.5E-16 99.7 10.7 76 13-94 145-223 (298)
13 3dr5_A Putative O-methyltransf 99.3 2.5E-12 8.6E-17 98.6 5.9 90 2-94 68-164 (221)
14 3cvo_A Methyltransferase-like 99.3 4.1E-11 1.4E-15 91.3 11.5 89 1-93 39-154 (202)
15 3kr9_A SAM-dependent methyltra 99.2 1.3E-11 4.6E-16 95.4 7.6 91 1-94 26-120 (225)
16 3ntv_A MW1564 protein; rossman 99.2 2.1E-11 7.1E-16 93.5 7.8 88 1-92 82-175 (232)
17 3u81_A Catechol O-methyltransf 99.2 2.5E-11 8.6E-16 92.1 7.9 92 1-95 69-172 (221)
18 3lec_A NADB-rossmann superfami 99.2 2.8E-11 9.6E-16 93.9 7.5 90 1-93 32-125 (230)
19 3tfw_A Putative O-methyltransf 99.2 4.1E-11 1.4E-15 92.9 8.5 91 1-94 74-171 (248)
20 3duw_A OMT, O-methyltransferas 99.2 2.7E-11 9.3E-16 91.6 7.1 91 1-94 69-168 (223)
21 1sui_A Caffeoyl-COA O-methyltr 99.2 2.7E-11 9.1E-16 94.2 6.6 89 2-93 91-190 (247)
22 3g89_A Ribosomal RNA small sub 99.2 5.5E-11 1.9E-15 92.7 7.3 91 1-95 91-186 (249)
23 1yzh_A TRNA (guanine-N(7)-)-me 99.2 5.3E-10 1.8E-14 84.2 12.5 90 1-94 52-157 (214)
24 3c3y_A Pfomt, O-methyltransfer 99.2 2.6E-11 8.8E-16 93.5 5.2 91 1-94 81-182 (237)
25 3r3h_A O-methyltransferase, SA 99.2 5.1E-12 1.8E-16 98.0 1.1 91 1-94 71-171 (242)
26 3gnl_A Uncharacterized protein 99.2 6.9E-11 2.4E-15 92.4 7.5 90 1-93 32-125 (244)
27 1ixk_A Methyltransferase; open 99.1 1.1E-10 3.8E-15 93.8 7.8 90 2-95 130-248 (315)
28 4df3_A Fibrillarin-like rRNA/T 99.1 2.2E-10 7.4E-15 89.0 9.1 86 2-93 89-182 (233)
29 3mti_A RRNA methylase; SAM-dep 99.1 2.4E-10 8.3E-15 83.8 8.9 87 1-94 33-136 (185)
30 3tr6_A O-methyltransferase; ce 99.1 5E-11 1.7E-15 90.1 4.8 91 1-94 75-175 (225)
31 2frx_A Hypothetical protein YE 99.1 1.7E-10 5.7E-15 98.0 7.9 90 2-95 129-248 (479)
32 3eey_A Putative rRNA methylase 99.1 1.7E-10 5.8E-15 85.5 7.0 89 1-93 33-139 (197)
33 4gek_A TRNA (CMO5U34)-methyltr 99.1 3.8E-10 1.3E-14 88.6 9.4 88 2-94 82-179 (261)
34 3p9n_A Possible methyltransfer 99.1 4.2E-10 1.4E-14 83.1 9.1 90 1-95 55-155 (189)
35 2hnk_A SAM-dependent O-methylt 99.1 6.6E-11 2.3E-15 90.8 4.8 90 1-93 71-181 (239)
36 2frn_A Hypothetical protein PH 99.1 5.2E-10 1.8E-14 88.2 10.0 90 1-95 136-227 (278)
37 1i9g_A Hypothetical protein RV 99.1 4.8E-10 1.6E-14 87.4 9.6 90 2-95 111-205 (280)
38 2qm3_A Predicted methyltransfe 99.1 9.4E-10 3.2E-14 90.2 11.7 91 1-95 182-280 (373)
39 3mb5_A SAM-dependent methyltra 99.1 6.3E-10 2.1E-14 85.6 9.9 90 1-94 104-195 (255)
40 1xdz_A Methyltransferase GIDB; 99.1 2.2E-10 7.6E-15 88.0 7.3 90 1-95 81-176 (240)
41 3jwg_A HEN1, methyltransferase 99.1 1.2E-09 4.1E-14 82.1 11.0 89 2-94 41-142 (219)
42 3jwh_A HEN1; methyltransferase 99.1 1.5E-09 5E-14 81.7 11.4 89 2-94 41-142 (217)
43 3dh0_A SAM dependent methyltra 99.1 7E-10 2.4E-14 83.2 9.5 88 2-93 49-143 (219)
44 2gpy_A O-methyltransferase; st 99.1 2E-10 6.7E-15 87.6 6.5 90 1-93 65-160 (233)
45 3cbg_A O-methyltransferase; cy 99.1 8.4E-11 2.9E-15 90.2 4.3 91 1-94 83-183 (232)
46 3a27_A TYW2, uncharacterized p 99.1 6.1E-10 2.1E-14 87.6 9.3 89 1-94 130-220 (272)
47 2fca_A TRNA (guanine-N(7)-)-me 99.1 7.8E-10 2.7E-14 83.8 9.5 90 1-94 49-154 (213)
48 3dxy_A TRNA (guanine-N(7)-)-me 99.1 2E-10 6.7E-15 87.8 6.2 90 1-94 45-151 (218)
49 3f4k_A Putative methyltransfer 99.1 1.2E-09 4E-14 83.9 10.4 89 2-94 58-151 (257)
50 3mgg_A Methyltransferase; NYSG 99.1 7.7E-10 2.6E-14 86.0 9.3 89 2-94 49-143 (276)
51 3ajd_A Putative methyltransfer 99.0 2.1E-10 7.2E-15 90.2 5.9 90 2-95 95-213 (274)
52 2b25_A Hypothetical protein; s 99.0 8.7E-10 3E-14 88.7 9.7 91 1-95 116-221 (336)
53 3kkz_A Uncharacterized protein 99.0 1.3E-09 4.6E-14 84.4 10.2 89 2-94 58-151 (267)
54 2pwy_A TRNA (adenine-N(1)-)-me 99.0 1.4E-09 4.9E-14 83.4 10.3 90 2-95 108-200 (258)
55 3m4x_A NOL1/NOP2/SUN family pr 99.0 1.7E-10 5.7E-15 97.5 5.1 90 2-95 117-236 (456)
56 3id6_C Fibrillarin-like rRNA/T 99.0 1.8E-09 6E-14 83.8 10.4 87 2-94 88-182 (232)
57 1vl5_A Unknown conserved prote 99.0 1.2E-09 4.1E-14 84.3 9.5 86 2-93 49-140 (260)
58 2ift_A Putative methylase HI07 99.0 7.1E-10 2.4E-14 83.2 7.8 90 1-95 64-165 (201)
59 3evz_A Methyltransferase; NYSG 99.0 1.2E-09 4.2E-14 82.6 9.0 86 2-94 68-180 (230)
60 3tma_A Methyltransferase; thum 99.0 1.4E-09 4.6E-14 88.4 9.8 92 1-96 214-320 (354)
61 3c3p_A Methyltransferase; NP_9 99.0 3.1E-10 1.1E-14 85.2 5.4 89 2-94 68-161 (210)
62 2yvl_A TRMI protein, hypotheti 99.0 6E-09 2E-13 79.4 12.5 88 2-95 103-192 (248)
63 1yb2_A Hypothetical protein TA 99.0 2.4E-09 8.1E-14 83.9 10.5 89 2-95 122-213 (275)
64 1o54_A SAM-dependent O-methylt 99.0 1.5E-09 5E-14 85.0 9.0 89 2-95 124-215 (277)
65 1nkv_A Hypothetical protein YJ 99.0 2.5E-09 8.4E-14 82.0 10.0 86 2-94 48-141 (256)
66 2avd_A Catechol-O-methyltransf 99.0 3.3E-10 1.1E-14 85.8 4.7 89 1-93 80-179 (229)
67 3dlc_A Putative S-adenosyl-L-m 99.0 1.7E-09 5.8E-14 80.4 8.6 86 2-93 55-148 (219)
68 3ckk_A TRNA (guanine-N(7)-)-me 99.0 2.4E-09 8E-14 82.7 9.6 91 2-95 58-170 (235)
69 2yxl_A PH0851 protein, 450AA l 99.0 1.7E-09 5.8E-14 90.9 9.4 90 2-95 271-391 (450)
70 2vdv_E TRNA (guanine-N(7)-)-me 99.0 3E-09 1E-13 81.9 10.2 90 1-94 60-174 (246)
71 3dtn_A Putative methyltransfer 99.0 2.2E-09 7.4E-14 81.4 9.0 86 2-94 56-149 (234)
72 1jsx_A Glucose-inhibited divis 99.0 2.7E-09 9.3E-14 79.4 9.3 88 2-95 77-167 (207)
73 4dcm_A Ribosomal RNA large sub 99.0 2.5E-09 8.5E-14 88.1 9.8 92 1-94 233-335 (375)
74 3k6r_A Putative transferase PH 99.0 3.1E-09 1.1E-13 84.5 9.6 87 1-92 136-224 (278)
75 2fpo_A Methylase YHHF; structu 98.9 1.9E-09 6.4E-14 81.0 7.5 90 1-95 65-162 (202)
76 1xxl_A YCGJ protein; structura 98.9 4.5E-09 1.6E-13 80.3 9.8 87 2-94 33-125 (239)
77 2bm8_A Cephalosporin hydroxyla 98.9 1.4E-09 4.6E-14 84.0 6.8 83 1-92 92-186 (236)
78 2ozv_A Hypothetical protein AT 98.9 3.7E-09 1.2E-13 82.5 9.3 92 1-95 47-172 (260)
79 3lpm_A Putative methyltransfer 98.9 2.6E-09 9E-14 82.9 8.4 90 1-94 60-177 (259)
80 1nv8_A HEMK protein; class I a 98.9 7.1E-09 2.4E-13 82.1 10.8 89 1-95 134-251 (284)
81 3bus_A REBM, methyltransferase 98.9 7.5E-09 2.6E-13 80.1 10.5 88 2-94 73-167 (273)
82 2b3t_A Protein methyltransfera 98.9 3.3E-09 1.1E-13 83.0 8.4 90 1-95 120-240 (276)
83 1ve3_A Hypothetical protein PH 98.9 8.5E-09 2.9E-13 77.4 10.3 86 2-94 50-143 (227)
84 1pjz_A Thiopurine S-methyltran 98.9 1.8E-09 6E-14 81.2 6.4 86 2-93 34-140 (203)
85 1l3i_A Precorrin-6Y methyltran 98.9 3.1E-09 1.1E-13 77.3 7.5 87 2-94 45-135 (192)
86 3m6w_A RRNA methylase; rRNA me 98.9 6.6E-10 2.3E-14 94.1 4.3 89 2-95 113-231 (464)
87 4fsd_A Arsenic methyltransfera 98.9 5.4E-09 1.8E-13 85.8 9.6 89 2-93 95-203 (383)
88 3hem_A Cyclopropane-fatty-acyl 98.9 1.1E-08 3.7E-13 80.8 10.9 85 2-95 84-185 (302)
89 3vc1_A Geranyl diphosphate 2-C 98.9 6.2E-09 2.1E-13 82.7 9.4 87 2-94 129-222 (312)
90 1nt2_A Fibrillarin-like PRE-rR 98.9 9.1E-09 3.1E-13 78.0 9.7 86 1-93 68-161 (210)
91 2xvm_A Tellurite resistance pr 98.9 8.2E-09 2.8E-13 75.8 9.1 85 2-93 44-136 (199)
92 3ocj_A Putative exported prote 98.9 1.9E-09 6.4E-14 85.5 6.0 81 10-94 139-228 (305)
93 4htf_A S-adenosylmethionine-de 98.9 4E-09 1.4E-13 82.4 7.8 87 2-94 80-174 (285)
94 2b9e_A NOL1/NOP2/SUN domain fa 98.9 1E-08 3.5E-13 82.5 10.2 68 2-73 114-185 (309)
95 1g8a_A Fibrillarin-like PRE-rR 98.9 9.5E-09 3.2E-13 77.8 9.5 87 2-94 85-179 (227)
96 3adn_A Spermidine synthase; am 98.9 3.4E-09 1.2E-13 84.6 7.3 90 2-94 95-199 (294)
97 3g07_A 7SK snRNA methylphospha 98.9 3.8E-09 1.3E-13 83.6 7.1 88 1-93 57-220 (292)
98 2qe6_A Uncharacterized protein 98.9 1E-08 3.5E-13 80.8 9.4 88 2-95 92-198 (274)
99 1dus_A MJ0882; hypothetical pr 98.9 2.4E-08 8.3E-13 72.6 10.6 88 2-95 64-159 (194)
100 3grz_A L11 mtase, ribosomal pr 98.9 6.3E-09 2.1E-13 77.5 7.6 84 2-92 72-158 (205)
101 2yxd_A Probable cobalt-precorr 98.9 1.5E-09 5.2E-14 78.6 4.0 85 2-95 47-133 (183)
102 2gb4_A Thiopurine S-methyltran 98.8 8.8E-09 3E-13 80.3 8.3 86 2-92 80-190 (252)
103 2o57_A Putative sarcosine dime 98.8 1.3E-08 4.4E-13 79.9 9.3 88 2-94 94-188 (297)
104 3ujc_A Phosphoethanolamine N-m 98.8 8.5E-09 2.9E-13 79.0 8.0 85 2-94 67-160 (266)
105 2ex4_A Adrenal gland protein A 98.8 5.3E-09 1.8E-13 79.9 6.6 77 14-94 102-186 (241)
106 3gu3_A Methyltransferase; alph 98.8 1.5E-08 5.1E-13 79.5 8.9 88 2-95 34-128 (284)
107 3m70_A Tellurite resistance pr 98.8 1.6E-08 5.4E-13 79.1 9.0 85 2-94 132-224 (286)
108 3g5t_A Trans-aconitate 3-methy 98.8 1.4E-08 4.9E-13 80.0 8.8 86 2-91 48-147 (299)
109 1sqg_A SUN protein, FMU protei 98.8 1E-08 3.4E-13 85.5 8.3 88 2-95 258-376 (429)
110 3dmg_A Probable ribosomal RNA 98.8 2E-08 6.8E-13 82.9 9.9 86 2-94 245-341 (381)
111 1iy9_A Spermidine synthase; ro 98.8 6E-09 2.1E-13 82.2 6.4 91 2-95 87-191 (275)
112 1u2z_A Histone-lysine N-methyl 98.8 1.9E-08 6.6E-13 84.4 9.8 87 1-92 253-358 (433)
113 1ws6_A Methyltransferase; stru 98.8 3.9E-09 1.3E-13 75.8 4.8 89 2-97 53-151 (171)
114 2fhp_A Methylase, putative; al 98.8 4.7E-09 1.6E-13 76.6 5.2 90 2-96 56-157 (187)
115 3lcc_A Putative methyl chlorid 98.8 1E-08 3.5E-13 77.8 7.3 79 11-94 85-172 (235)
116 1fbn_A MJ fibrillarin homologu 98.8 2.6E-08 9E-13 75.8 9.5 84 2-93 86-178 (230)
117 3ofk_A Nodulation protein S; N 98.8 1.2E-08 4.2E-13 76.2 7.6 83 2-93 63-154 (216)
118 3orh_A Guanidinoacetate N-meth 98.8 3.9E-09 1.3E-13 81.1 4.8 87 1-93 71-170 (236)
119 2yqz_A Hypothetical protein TT 98.8 2.1E-08 7.1E-13 76.8 8.8 76 14-94 61-142 (263)
120 3gjy_A Spermidine synthase; AP 98.8 5.3E-09 1.8E-13 84.6 5.6 90 2-95 101-202 (317)
121 2esr_A Methyltransferase; stru 98.8 5.2E-09 1.8E-13 76.1 5.1 90 2-96 43-141 (177)
122 3gdh_A Trimethylguanosine synt 98.8 1.9E-09 6.3E-14 82.3 2.7 85 2-93 90-181 (241)
123 3bt7_A TRNA (uracil-5-)-methyl 98.8 8.4E-09 2.9E-13 84.4 6.7 90 1-96 224-329 (369)
124 3g5l_A Putative S-adenosylmeth 98.8 1.7E-08 5.7E-13 77.4 7.9 85 2-94 56-146 (253)
125 2igt_A SAM dependent methyltra 98.8 9.5E-09 3.2E-13 83.3 6.8 89 1-94 164-273 (332)
126 1zx0_A Guanidinoacetate N-meth 98.8 4.8E-09 1.6E-13 80.1 4.7 86 2-93 72-170 (236)
127 2kw5_A SLR1183 protein; struct 98.8 9.6E-08 3.3E-12 70.6 11.7 87 2-95 41-133 (202)
128 4dzr_A Protein-(glutamine-N5) 98.8 6.1E-10 2.1E-14 82.6 -0.4 66 2-72 42-111 (215)
129 1mjf_A Spermidine synthase; sp 98.8 5E-09 1.7E-13 82.8 4.5 87 2-94 87-194 (281)
130 3sm3_A SAM-dependent methyltra 98.8 3.3E-08 1.1E-12 74.3 8.9 87 2-94 42-142 (235)
131 1wxx_A TT1595, hypothetical pr 98.8 5.6E-09 1.9E-13 85.8 4.9 90 1-96 220-328 (382)
132 2pxx_A Uncharacterized protein 98.8 1.7E-08 5.9E-13 74.8 7.2 87 2-95 54-161 (215)
133 1inl_A Spermidine synthase; be 98.8 8.9E-09 3E-13 82.1 5.8 91 2-95 102-207 (296)
134 2ipx_A RRNA 2'-O-methyltransfe 98.8 4.1E-08 1.4E-12 74.7 9.2 87 2-94 89-183 (233)
135 3ou2_A SAM-dependent methyltra 98.7 3.4E-08 1.2E-12 73.5 8.5 84 2-96 58-149 (218)
136 2p35_A Trans-aconitate 2-methy 98.7 2.5E-08 8.6E-13 76.3 7.9 82 2-94 45-133 (259)
137 2p8j_A S-adenosylmethionine-de 98.7 2.8E-08 9.5E-13 73.7 7.9 78 13-95 45-130 (209)
138 1xj5_A Spermidine synthase 1; 98.7 6.3E-09 2.1E-13 84.5 4.5 88 2-93 132-235 (334)
139 3i53_A O-methyltransferase; CO 98.7 1.1E-07 3.7E-12 76.1 11.7 88 2-95 181-276 (332)
140 1kpg_A CFA synthase;, cyclopro 98.7 9.6E-08 3.3E-12 74.5 11.1 84 2-94 76-169 (287)
141 2o07_A Spermidine synthase; st 98.7 9.2E-09 3.2E-13 82.4 5.3 90 2-94 107-210 (304)
142 2p7i_A Hypothetical protein; p 98.7 2E-08 6.9E-13 75.9 6.9 83 2-95 54-143 (250)
143 2b78_A Hypothetical protein SM 98.7 1.4E-08 4.7E-13 83.8 6.1 91 1-96 223-334 (385)
144 3hnr_A Probable methyltransfer 98.7 6.7E-08 2.3E-12 72.3 9.3 82 2-94 57-146 (220)
145 2fk8_A Methoxy mycolic acid sy 98.7 1E-07 3.5E-12 75.6 10.8 86 2-95 102-196 (318)
146 2yx1_A Hypothetical protein MJ 98.7 4.7E-08 1.6E-12 79.1 8.9 84 2-95 207-293 (336)
147 3dp7_A SAM-dependent methyltra 98.7 1.4E-07 4.8E-12 76.7 11.6 89 2-94 191-288 (363)
148 1xtp_A LMAJ004091AAA; SGPP, st 98.7 2.4E-08 8.2E-13 76.2 6.6 85 2-94 105-198 (254)
149 3c0k_A UPF0064 protein YCCW; P 98.7 1.1E-08 3.9E-13 84.3 5.1 91 1-96 231-342 (396)
150 2as0_A Hypothetical protein PH 98.7 1.3E-08 4.6E-13 83.8 5.5 91 1-96 228-338 (396)
151 3l8d_A Methyltransferase; stru 98.7 4.5E-08 1.5E-12 74.1 8.0 84 2-94 65-154 (242)
152 1ri5_A MRNA capping enzyme; me 98.7 6.8E-08 2.3E-12 75.2 9.2 89 2-95 76-176 (298)
153 4dmg_A Putative uncharacterize 98.7 1.8E-08 6E-13 83.6 6.1 88 1-95 225-328 (393)
154 3m33_A Uncharacterized protein 98.7 5.7E-08 1.9E-12 73.6 8.4 81 2-93 60-142 (226)
155 2fyt_A Protein arginine N-meth 98.7 4.2E-08 1.4E-12 79.5 8.1 84 1-90 75-168 (340)
156 2pjd_A Ribosomal RNA small sub 98.7 6.6E-08 2.3E-12 78.2 9.2 87 1-94 207-304 (343)
157 4hc4_A Protein arginine N-meth 98.7 3.5E-08 1.2E-12 81.5 7.7 85 1-91 94-187 (376)
158 2b2c_A Spermidine synthase; be 98.7 1.2E-08 3.9E-13 82.3 4.7 89 2-94 120-223 (314)
159 3bkx_A SAM-dependent methyltra 98.7 6.6E-08 2.3E-12 74.8 8.9 89 2-94 55-160 (275)
160 3gwz_A MMCR; methyltransferase 98.7 2E-07 6.9E-12 76.0 12.1 87 2-94 214-308 (369)
161 3fzg_A 16S rRNA methylase; met 98.7 1.3E-08 4.4E-13 77.1 4.2 84 2-92 61-151 (200)
162 2cmg_A Spermidine synthase; tr 98.7 1.4E-08 4.8E-13 79.8 4.6 75 15-95 95-173 (262)
163 3bkw_A MLL3908 protein, S-aden 98.7 4.7E-08 1.6E-12 74.0 7.4 85 2-94 55-145 (243)
164 3g2m_A PCZA361.24; SAM-depende 98.7 3.6E-08 1.2E-12 77.7 6.9 87 2-95 94-192 (299)
165 3v97_A Ribosomal RNA large sub 98.7 2E-08 6.8E-13 88.8 6.0 90 1-95 550-659 (703)
166 3q7e_A Protein arginine N-meth 98.7 7.1E-08 2.4E-12 78.3 8.7 86 1-91 77-171 (349)
167 3h2b_A SAM-dependent methyltra 98.7 3.2E-08 1.1E-12 73.3 6.1 83 2-95 53-143 (203)
168 1y8c_A S-adenosylmethionine-de 98.7 6.3E-08 2.2E-12 73.2 7.8 85 2-94 49-143 (246)
169 3giw_A Protein of unknown func 98.7 3.5E-08 1.2E-12 78.3 6.5 90 3-96 94-203 (277)
170 1o9g_A RRNA methyltransferase; 98.7 2.3E-08 7.7E-13 77.0 5.3 90 1-91 62-212 (250)
171 2h00_A Methyltransferase 10 do 98.7 1.6E-08 5.6E-13 77.8 4.4 67 2-72 77-150 (254)
172 2i7c_A Spermidine synthase; tr 98.7 1.7E-08 5.8E-13 79.9 4.5 89 2-94 90-193 (283)
173 4hg2_A Methyltransferase type 98.7 5.2E-08 1.8E-12 76.2 7.2 70 14-93 61-135 (257)
174 3uwp_A Histone-lysine N-methyl 98.6 7E-08 2.4E-12 80.7 8.3 89 1-93 184-288 (438)
175 3htx_A HEN1; HEN1, small RNA m 98.6 1.9E-07 6.4E-12 83.9 11.3 89 2-94 733-835 (950)
176 1qzz_A RDMB, aclacinomycin-10- 98.6 1.5E-07 5E-12 76.3 9.8 86 2-94 194-288 (374)
177 2nxc_A L11 mtase, ribosomal pr 98.6 2E-08 7E-13 78.0 4.5 85 1-93 131-218 (254)
178 1p91_A Ribosomal RNA large sub 98.6 1.3E-07 4.5E-12 73.0 9.0 83 2-95 97-180 (269)
179 1g6q_1 HnRNP arginine N-methyl 98.6 1E-07 3.6E-12 76.7 8.6 85 1-90 49-142 (328)
180 2dul_A N(2),N(2)-dimethylguano 98.6 3E-08 1E-12 81.8 5.5 89 1-93 58-164 (378)
181 3ccf_A Cyclopropane-fatty-acyl 98.6 1.1E-07 3.6E-12 74.2 8.4 82 2-95 69-156 (279)
182 1uir_A Polyamine aminopropyltr 98.6 3.2E-08 1.1E-12 79.4 5.4 90 2-94 89-196 (314)
183 3bwc_A Spermidine synthase; SA 98.6 4.5E-08 1.6E-12 78.1 5.9 91 2-95 107-212 (304)
184 3d2l_A SAM-dependent methyltra 98.6 1.4E-07 4.9E-12 71.3 8.4 74 15-94 55-138 (243)
185 2gs9_A Hypothetical protein TT 98.6 1.2E-07 4E-12 70.6 7.7 71 16-95 58-134 (211)
186 3thr_A Glycine N-methyltransfe 98.6 2.8E-08 9.6E-13 77.7 4.2 88 2-94 69-176 (293)
187 2ip2_A Probable phenazine-spec 98.6 1.6E-07 5.6E-12 75.0 8.6 87 2-94 179-273 (334)
188 3ggd_A SAM-dependent methyltra 98.6 8.1E-08 2.8E-12 73.2 6.5 84 2-94 68-164 (245)
189 3mq2_A 16S rRNA methyltransfer 98.6 1.1E-07 3.7E-12 71.4 7.0 89 1-94 38-141 (218)
190 2pt6_A Spermidine synthase; tr 98.6 3.5E-08 1.2E-12 79.6 4.5 90 2-94 128-231 (321)
191 1x19_A CRTF-related protein; m 98.6 5.1E-07 1.7E-11 73.0 11.4 87 2-94 202-296 (359)
192 1wzn_A SAM-dependent methyltra 98.6 2.3E-07 8E-12 70.8 8.9 85 2-94 53-146 (252)
193 3tm4_A TRNA (guanine N2-)-meth 98.6 1.1E-07 3.8E-12 77.9 7.5 89 1-95 228-331 (373)
194 3pfg_A N-methyltransferase; N, 98.6 1.6E-07 5.5E-12 72.3 7.9 70 14-93 72-151 (263)
195 3r0q_C Probable protein argini 98.6 1.4E-07 4.9E-12 77.3 8.0 87 1-93 74-169 (376)
196 3p2e_A 16S rRNA methylase; met 98.6 6.3E-08 2.2E-12 74.1 5.5 87 2-93 36-139 (225)
197 1tw3_A COMT, carminomycin 4-O- 98.6 2.9E-07 9.8E-12 74.3 9.4 86 2-94 195-289 (360)
198 2r3s_A Uncharacterized protein 98.6 2.4E-07 8.3E-12 73.7 8.7 88 2-94 177-272 (335)
199 3e23_A Uncharacterized protein 98.6 1.6E-07 5.5E-12 70.0 7.2 81 2-95 55-143 (211)
200 2y1w_A Histone-arginine methyl 98.5 2.1E-07 7E-12 75.5 8.3 86 1-93 61-155 (348)
201 2aot_A HMT, histamine N-methyl 98.5 1.3E-07 4.3E-12 74.4 6.0 79 13-94 79-173 (292)
202 3mcz_A O-methyltransferase; ad 98.5 2.7E-07 9.3E-12 74.2 8.0 89 2-94 191-288 (352)
203 3cgg_A SAM-dependent methyltra 98.5 4.7E-07 1.6E-11 65.7 8.6 83 2-95 58-149 (195)
204 3bzb_A Uncharacterized protein 98.5 1.6E-06 5.4E-11 68.2 12.1 90 1-95 90-207 (281)
205 2i62_A Nicotinamide N-methyltr 98.5 8.2E-08 2.8E-12 73.6 4.5 89 2-95 68-200 (265)
206 3axs_A Probable N(2),N(2)-dime 98.5 1.1E-07 3.7E-12 78.9 5.2 90 1-93 63-158 (392)
207 3bgv_A MRNA CAP guanine-N7 met 98.5 6E-07 2E-11 71.1 9.0 79 13-94 56-156 (313)
208 3iv6_A Putative Zn-dependent a 98.5 7.1E-07 2.4E-11 70.2 9.2 84 1-94 56-149 (261)
209 2qfm_A Spermine synthase; sper 98.5 8.6E-08 3E-12 78.7 4.1 90 2-96 200-317 (364)
210 2vdw_A Vaccinia virus capping 98.5 5.9E-07 2E-11 71.7 8.7 78 14-95 71-171 (302)
211 3k0b_A Predicted N6-adenine-sp 98.4 4.7E-07 1.6E-11 75.0 7.9 78 15-96 264-353 (393)
212 3i9f_A Putative type 11 methyl 98.4 3.2E-07 1.1E-11 66.0 5.8 79 2-94 29-113 (170)
213 2a14_A Indolethylamine N-methy 98.4 2.4E-07 8.1E-12 72.0 5.3 77 15-94 79-198 (263)
214 2jjq_A Uncharacterized RNA met 98.4 2.2E-06 7.6E-11 71.6 11.4 85 1-94 301-388 (425)
215 3b3j_A Histone-arginine methyl 98.4 5E-07 1.7E-11 76.6 7.6 86 1-93 169-263 (480)
216 3bxo_A N,N-dimethyltransferase 98.4 4.7E-07 1.6E-11 68.2 6.6 80 2-93 52-141 (239)
217 1uwv_A 23S rRNA (uracil-5-)-me 98.4 2.6E-06 8.9E-11 71.1 11.6 87 2-94 298-390 (433)
218 3o4f_A Spermidine synthase; am 98.4 2.1E-06 7.1E-11 68.7 10.3 91 2-95 93-200 (294)
219 3ege_A Putative methyltransfer 98.4 4.1E-07 1.4E-11 70.3 5.8 81 2-95 46-132 (261)
220 3ldg_A Putative uncharacterize 98.4 2E-06 6.8E-11 71.0 9.7 78 15-96 257-346 (384)
221 2f8l_A Hypothetical protein LM 98.4 1.5E-06 5.3E-11 70.0 8.7 73 15-93 160-256 (344)
222 1af7_A Chemotaxis receptor met 98.3 9.5E-07 3.3E-11 69.8 7.2 88 4-94 123-253 (274)
223 4fzv_A Putative methyltransfer 98.3 4.5E-07 1.6E-11 74.4 5.4 89 2-95 161-286 (359)
224 3lcv_B Sisomicin-gentamicin re 98.3 1.5E-06 5.1E-11 68.7 8.0 85 2-92 144-235 (281)
225 3q87_B N6 adenine specific DNA 98.3 2.7E-06 9.1E-11 61.9 8.2 75 2-94 35-124 (170)
226 2g72_A Phenylethanolamine N-me 98.3 8.7E-07 3E-11 69.3 5.7 88 2-93 83-215 (289)
227 2wk1_A NOVP; transferase, O-me 98.3 5.6E-07 1.9E-11 71.6 4.3 88 2-93 118-244 (282)
228 2avn_A Ubiquinone/menaquinone 98.3 1.9E-06 6.4E-11 66.4 7.2 81 2-94 66-153 (260)
229 2ld4_A Anamorsin; methyltransf 98.2 2.3E-07 7.9E-12 67.4 1.2 67 19-93 25-101 (176)
230 3e8s_A Putative SAM dependent 98.2 1.4E-06 4.8E-11 64.7 5.6 81 2-94 64-153 (227)
231 2plw_A Ribosomal RNA methyltra 98.2 3.8E-06 1.3E-10 61.8 7.5 78 2-94 34-155 (201)
232 3ldu_A Putative methylase; str 98.2 5.2E-06 1.8E-10 68.4 9.0 78 15-96 258-347 (385)
233 3opn_A Putative hemolysin; str 98.2 2.3E-07 7.9E-12 71.5 0.6 86 1-93 48-137 (232)
234 3dli_A Methyltransferase; PSI- 98.2 2.1E-06 7.3E-11 65.2 5.7 80 2-95 53-142 (240)
235 2xyq_A Putative 2'-O-methyl tr 98.2 1.5E-06 5.1E-11 69.3 4.9 72 5-94 83-172 (290)
236 4a6d_A Hydroxyindole O-methylt 98.2 1.4E-05 4.7E-10 64.8 10.7 86 2-94 191-284 (353)
237 3cc8_A Putative methyltransfer 98.2 3.6E-06 1.2E-10 62.6 6.7 81 2-95 44-132 (230)
238 3sso_A Methyltransferase; macr 98.2 1.1E-06 3.9E-11 73.1 4.3 74 6-93 239-324 (419)
239 3lst_A CALO1 methyltransferase 98.2 4E-06 1.4E-10 67.6 7.2 84 2-94 196-287 (348)
240 1zq9_A Probable dimethyladenos 98.1 6E-06 2E-10 65.2 7.8 65 1-73 39-104 (285)
241 3hp7_A Hemolysin, putative; st 98.1 2.7E-06 9.3E-11 67.9 5.6 85 1-94 96-186 (291)
242 1wy7_A Hypothetical protein PH 98.1 2.8E-05 9.4E-10 57.5 10.8 64 1-73 60-123 (207)
243 1vlm_A SAM-dependent methyltra 98.1 6E-06 2E-10 61.9 6.9 67 18-95 69-141 (219)
244 2okc_A Type I restriction enzy 98.1 4.1E-06 1.4E-10 70.0 6.3 75 15-94 209-308 (445)
245 1ej0_A FTSJ; methyltransferase 98.1 2.8E-06 9.6E-11 60.3 4.3 79 2-95 34-138 (180)
246 3frh_A 16S rRNA methylase; met 98.1 2E-05 6.7E-10 61.6 9.3 81 2-91 117-204 (253)
247 2qy6_A UPF0209 protein YFCK; s 98.1 3.6E-06 1.2E-10 65.9 5.1 76 15-93 97-213 (257)
248 3gru_A Dimethyladenosine trans 98.0 1.9E-05 6.7E-10 62.9 8.6 65 1-73 61-125 (295)
249 3ll7_A Putative methyltransfer 98.0 5.2E-06 1.8E-10 69.2 4.9 66 1-72 104-173 (410)
250 2h1r_A Dimethyladenosine trans 98.0 1.4E-05 4.7E-10 63.5 7.0 64 2-73 54-117 (299)
251 3v97_A Ribosomal RNA large sub 98.0 4.6E-05 1.6E-09 67.4 10.4 78 15-95 257-349 (703)
252 3dou_A Ribosomal RNA large sub 97.9 1.2E-05 4E-10 59.8 4.8 76 2-94 37-140 (191)
253 2nyu_A Putative ribosomal RNA 97.9 1.7E-05 5.8E-10 57.9 5.3 78 2-94 34-146 (196)
254 3reo_A (ISO)eugenol O-methyltr 97.9 2.8E-05 9.5E-10 63.3 7.0 79 2-94 215-301 (368)
255 1fp2_A Isoflavone O-methyltran 97.8 3.7E-05 1.3E-09 61.9 6.7 79 2-94 200-289 (352)
256 1m6y_A S-adenosyl-methyltransf 97.8 3.8E-05 1.3E-09 61.4 6.6 67 2-74 38-110 (301)
257 1fp1_D Isoliquiritigenin 2'-O- 97.8 3.3E-05 1.1E-09 62.7 6.3 78 2-93 221-306 (372)
258 2r6z_A UPF0341 protein in RSP 97.8 6.4E-06 2.2E-10 64.4 1.9 68 1-73 94-172 (258)
259 3p9c_A Caffeic acid O-methyltr 97.8 4.8E-05 1.6E-09 61.8 7.0 79 2-94 213-299 (364)
260 1ne2_A Hypothetical protein TA 97.8 6.1E-05 2.1E-09 55.4 7.0 61 2-75 63-123 (200)
261 4azs_A Methyltransferase WBDD; 97.8 1.5E-05 5.1E-10 68.6 3.9 85 2-92 78-172 (569)
262 4e2x_A TCAB9; kijanose, tetron 97.7 2.6E-06 8.9E-11 70.0 -1.6 75 14-94 129-209 (416)
263 2p41_A Type II methyltransfera 97.7 2.2E-05 7.6E-10 62.7 3.3 82 2-94 94-192 (305)
264 2ar0_A M.ecoki, type I restric 97.6 8.3E-05 2.8E-09 63.8 6.3 77 15-94 212-313 (541)
265 3lkd_A Type I restriction-modi 97.6 0.0008 2.7E-08 57.8 12.1 77 14-94 248-359 (542)
266 3c6k_A Spermine synthase; sper 97.6 3.4E-05 1.2E-09 63.6 3.2 79 13-94 227-332 (381)
267 4gqb_A Protein arginine N-meth 97.6 8.2E-05 2.8E-09 65.1 5.6 70 16-90 387-464 (637)
268 1zg3_A Isoflavanone 4'-O-methy 97.5 0.0002 6.9E-09 57.6 6.6 79 2-94 205-294 (358)
269 3tqs_A Ribosomal RNA small sub 97.5 0.00017 5.7E-09 56.2 5.7 63 1-72 40-106 (255)
270 2oyr_A UPF0341 protein YHIQ; a 97.4 8.9E-05 3E-09 58.0 3.9 69 1-74 99-176 (258)
271 2ih2_A Modification methylase 97.4 0.00011 3.8E-09 60.1 4.3 80 2-95 51-166 (421)
272 3fut_A Dimethyladenosine trans 97.3 0.00043 1.5E-08 54.4 6.8 64 1-73 57-121 (271)
273 2zfu_A Nucleomethylin, cerebra 97.3 0.0002 7E-09 53.0 4.5 61 15-94 87-152 (215)
274 3khk_A Type I restriction-modi 97.3 0.0002 6.9E-09 61.5 4.5 77 15-94 284-396 (544)
275 2wa2_A Non-structural protein 97.2 4.9E-05 1.7E-09 59.9 -0.6 83 2-94 94-194 (276)
276 2oxt_A Nucleoside-2'-O-methylt 97.2 6E-05 2E-09 59.0 -0.1 82 2-94 86-186 (265)
277 1qam_A ERMC' methyltransferase 97.1 0.0033 1.1E-07 48.2 9.6 61 1-70 41-102 (244)
278 1yub_A Ermam, rRNA methyltrans 97.0 7.6E-06 2.6E-10 62.9 -6.5 85 2-95 41-147 (245)
279 3s1s_A Restriction endonucleas 96.6 0.0046 1.6E-07 55.6 7.5 77 15-94 349-466 (878)
280 1qyr_A KSGA, high level kasuga 96.4 0.0019 6.5E-08 50.0 3.3 64 1-72 32-100 (252)
281 3ua3_A Protein arginine N-meth 96.3 0.0037 1.3E-07 55.4 4.7 72 15-90 447-531 (745)
282 3uzu_A Ribosomal RNA small sub 96.1 0.0067 2.3E-07 47.7 5.1 48 1-56 53-102 (279)
283 2oo3_A Protein involved in cat 96.1 0.0067 2.3E-07 48.1 4.8 82 5-92 104-197 (283)
284 3tka_A Ribosomal RNA small sub 96.0 0.012 4.1E-07 47.8 6.1 64 2-73 70-139 (347)
285 3ufb_A Type I restriction-modi 95.9 0.049 1.7E-06 46.5 9.6 55 15-73 255-313 (530)
286 1wg8_A Predicted S-adenosylmet 95.6 0.0088 3E-07 47.4 3.6 61 5-76 38-103 (285)
287 3ftd_A Dimethyladenosine trans 95.5 0.054 1.8E-06 41.6 7.9 51 14-72 54-105 (249)
288 1e3j_A NADP(H)-dependent ketos 94.5 0.059 2E-06 42.9 5.6 80 2-92 181-270 (352)
289 3two_A Mannitol dehydrogenase; 94.4 0.059 2E-06 42.8 5.3 76 2-93 189-265 (348)
290 3r24_A NSP16, 2'-O-methyl tran 93.7 0.082 2.8E-06 42.4 4.8 70 7-94 131-218 (344)
291 4auk_A Ribosomal RNA large sub 93.6 0.25 8.5E-06 40.5 7.7 66 14-90 233-303 (375)
292 3m6i_A L-arabinitol 4-dehydrog 93.5 0.12 4.2E-06 41.1 5.7 83 2-93 192-283 (363)
293 3tos_A CALS11; methyltransfera 92.9 0.016 5.6E-07 45.2 -0.3 49 46-94 160-218 (257)
294 2h6e_A ADH-4, D-arabinose 1-de 92.9 0.022 7.4E-07 45.3 0.4 83 2-93 183-269 (344)
295 3nx4_A Putative oxidoreductase 92.8 0.16 5.3E-06 39.8 5.3 79 2-93 160-241 (324)
296 3s2e_A Zinc-containing alcohol 92.8 0.1 3.4E-06 41.3 4.1 78 2-92 179-262 (340)
297 1uuf_A YAHK, zinc-type alcohol 92.7 0.06 2.1E-06 43.4 2.7 78 2-92 207-287 (369)
298 2zig_A TTHA0409, putative modi 92.6 0.32 1.1E-05 38.0 6.8 34 2-37 247-280 (297)
299 4dvj_A Putative zinc-dependent 92.5 0.045 1.5E-06 44.0 1.8 80 2-92 185-269 (363)
300 1f8f_A Benzyl alcohol dehydrog 92.3 0.31 1.1E-05 38.9 6.5 81 2-93 203-289 (371)
301 3uko_A Alcohol dehydrogenase c 92.2 0.33 1.1E-05 38.9 6.6 82 2-93 206-295 (378)
302 1vj0_A Alcohol dehydrogenase, 92.2 0.066 2.3E-06 43.2 2.4 81 2-93 208-298 (380)
303 1pl8_A Human sorbitol dehydrog 91.7 0.14 4.7E-06 40.9 3.7 81 2-92 184-272 (356)
304 3uog_A Alcohol dehydrogenase; 91.6 0.37 1.3E-05 38.4 6.2 80 2-94 202-288 (363)
305 3fbg_A Putative arginate lyase 91.4 0.045 1.6E-06 43.5 0.6 73 7-93 170-248 (346)
306 3fpc_A NADP-dependent alcohol 91.3 0.027 9.3E-07 44.9 -0.8 81 2-93 179-266 (352)
307 3b5i_A S-adenosyl-L-methionine 91.1 0.15 5.2E-06 41.7 3.4 50 47-96 135-228 (374)
308 3goh_A Alcohol dehydrogenase, 90.8 0.18 6.2E-06 39.3 3.6 74 2-93 155-229 (315)
309 3jv7_A ADH-A; dehydrogenase, n 90.6 0.067 2.3E-06 42.4 0.9 81 2-93 184-270 (345)
310 1piw_A Hypothetical zinc-type 90.6 0.05 1.7E-06 43.5 0.1 81 2-93 192-276 (360)
311 1rjw_A ADH-HT, alcohol dehydro 90.5 0.41 1.4E-05 37.8 5.4 78 2-93 177-261 (339)
312 2dph_A Formaldehyde dismutase; 90.4 0.71 2.4E-05 37.3 6.9 79 2-92 198-298 (398)
313 1p0f_A NADP-dependent alcohol 90.3 0.16 5.6E-06 40.6 2.9 82 2-93 204-293 (373)
314 2eih_A Alcohol dehydrogenase; 90.0 1 3.5E-05 35.4 7.4 71 8-93 187-265 (343)
315 2cf5_A Atccad5, CAD, cinnamyl 90.0 0.085 2.9E-06 42.2 1.0 80 2-92 193-274 (357)
316 2fzw_A Alcohol dehydrogenase c 90.0 0.82 2.8E-05 36.4 6.8 82 2-93 203-292 (373)
317 4ej6_A Putative zinc-binding d 89.9 0.76 2.6E-05 36.8 6.6 81 2-93 195-284 (370)
318 3oig_A Enoyl-[acyl-carrier-pro 89.7 1.4 4.9E-05 33.0 7.7 81 10-94 29-148 (266)
319 2zig_A TTHA0409, putative modi 89.6 0.11 3.9E-06 40.6 1.5 50 46-95 22-99 (297)
320 2cdc_A Glucose dehydrogenase g 89.5 0.66 2.3E-05 37.0 6.0 76 2-93 193-278 (366)
321 1m6e_X S-adenosyl-L-methionnin 89.4 0.34 1.2E-05 39.4 4.2 80 13-96 90-212 (359)
322 3qwb_A Probable quinone oxidor 88.8 0.68 2.3E-05 36.3 5.5 74 7-93 168-247 (334)
323 1cdo_A Alcohol dehydrogenase; 88.8 0.27 9.2E-06 39.4 3.1 82 2-93 205-294 (374)
324 1yqd_A Sinapyl alcohol dehydro 88.5 0.19 6.5E-06 40.3 2.0 76 7-93 206-282 (366)
325 4a2c_A Galactitol-1-phosphate 88.4 1.5 5.1E-05 34.3 7.3 83 2-94 173-261 (346)
326 3pi7_A NADH oxidoreductase; gr 88.1 0.64 2.2E-05 36.8 4.9 73 7-93 184-263 (349)
327 3o26_A Salutaridine reductase; 88.1 3.4 0.00012 31.2 9.0 60 10-73 32-102 (311)
328 1kol_A Formaldehyde dehydrogen 88.0 1.4 4.7E-05 35.4 6.9 79 2-92 198-299 (398)
329 1pqw_A Polyketide synthase; ro 87.9 1.6 5.6E-05 31.2 6.7 71 8-93 59-137 (198)
330 1boo_A Protein (N-4 cytosine-s 87.8 0.18 6.1E-06 40.1 1.4 51 46-96 15-87 (323)
331 3jyn_A Quinone oxidoreductase; 87.2 0.088 3E-06 41.4 -0.7 76 7-94 160-240 (325)
332 1e3i_A Alcohol dehydrogenase, 87.0 1.9 6.4E-05 34.4 7.1 82 2-93 208-297 (376)
333 1xa0_A Putative NADPH dependen 86.8 0.99 3.4E-05 35.2 5.3 74 7-92 169-245 (328)
334 2b5w_A Glucose dehydrogenase; 86.8 1.4 4.8E-05 34.9 6.2 71 9-93 195-273 (357)
335 2jhf_A Alcohol dehydrogenase E 86.8 1.9 6.6E-05 34.3 7.1 82 2-93 204-293 (374)
336 3gms_A Putative NADPH:quinone 86.7 0.031 1.1E-06 44.3 -3.6 75 7-93 164-243 (340)
337 3tqh_A Quinone oxidoreductase; 86.6 0.59 2E-05 36.5 3.8 77 2-92 166-244 (321)
338 1jvb_A NAD(H)-dependent alcoho 86.2 0.75 2.6E-05 36.3 4.3 76 7-93 190-271 (347)
339 2efj_A 3,7-dimethylxanthine me 85.9 0.32 1.1E-05 39.9 2.0 55 13-74 92-161 (384)
340 1gu7_A Enoyl-[acyl-carrier-pro 85.9 0.37 1.3E-05 38.3 2.3 32 61-93 244-275 (364)
341 2j3h_A NADP-dependent oxidored 85.8 1.2 4.1E-05 34.9 5.3 73 8-92 176-254 (345)
342 3evf_A RNA-directed RNA polyme 85.8 0.39 1.3E-05 37.8 2.4 75 14-94 98-185 (277)
343 4eez_A Alcohol dehydrogenase 1 85.7 0.15 5E-06 40.3 -0.1 77 7-93 182-263 (348)
344 1iz0_A Quinone oxidoreductase; 85.5 0.26 8.9E-06 38.2 1.2 73 7-92 145-217 (302)
345 4fs3_A Enoyl-[acyl-carrier-pro 85.2 3.6 0.00012 31.0 7.6 59 10-72 28-96 (256)
346 1i4w_A Mitochondrial replicati 85.1 1.4 4.8E-05 35.6 5.4 47 1-55 69-116 (353)
347 2d8a_A PH0655, probable L-thre 84.8 1.3 4.5E-05 34.9 5.1 76 7-93 186-267 (348)
348 4eye_A Probable oxidoreductase 84.8 0.32 1.1E-05 38.5 1.5 72 7-93 179-257 (342)
349 2c0c_A Zinc binding alcohol de 84.7 2.1 7.2E-05 34.0 6.3 79 2-93 177-261 (362)
350 1qor_A Quinone oxidoreductase; 84.6 2.1 7.2E-05 33.3 6.2 74 8-93 161-239 (327)
351 2vn8_A Reticulon-4-interacting 84.4 0.39 1.3E-05 38.5 1.8 74 7-93 203-280 (375)
352 3krt_A Crotonyl COA reductase; 84.3 2.5 8.7E-05 34.7 6.8 79 2-93 242-344 (456)
353 4dup_A Quinone oxidoreductase; 84.2 1.4 4.9E-05 34.8 5.1 74 7-94 187-266 (353)
354 1wly_A CAAR, 2-haloacrylate re 84.2 2.2 7.6E-05 33.3 6.2 71 8-93 166-244 (333)
355 1pjc_A Protein (L-alanine dehy 83.9 1.1 3.8E-05 35.9 4.4 77 8-94 186-268 (361)
356 1tt7_A YHFP; alcohol dehydroge 83.8 1.3 4.6E-05 34.4 4.7 75 7-93 170-247 (330)
357 3ip1_A Alcohol dehydrogenase, 83.2 4.3 0.00015 32.7 7.6 81 2-93 226-318 (404)
358 2dq4_A L-threonine 3-dehydroge 83.2 0.17 5.7E-06 40.1 -0.9 79 2-93 177-262 (343)
359 3trk_A Nonstructural polyprote 83.1 0.55 1.9E-05 37.0 2.1 38 55-92 203-258 (324)
360 4b7c_A Probable oxidoreductase 81.9 0.28 9.6E-06 38.5 0.1 75 8-93 170-248 (336)
361 3g7u_A Cytosine-specific methy 81.3 3.4 0.00012 33.4 6.4 63 2-74 13-83 (376)
362 3grk_A Enoyl-(acyl-carrier-pro 81.1 13 0.00043 28.4 9.4 58 10-73 53-120 (293)
363 2py6_A Methyltransferase FKBM; 80.9 3.1 0.0001 34.0 6.0 49 1-53 237-291 (409)
364 4a0s_A Octenoyl-COA reductase/ 80.7 3.5 0.00012 33.6 6.3 75 7-93 240-336 (447)
365 1zsy_A Mitochondrial 2-enoyl t 80.5 2.8 9.5E-05 33.1 5.5 30 62-92 240-269 (357)
366 3fwz_A Inner membrane protein 79.4 8 0.00027 26.1 6.9 72 13-95 29-107 (140)
367 4dcm_A Ribosomal RNA large sub 79.2 6.3 0.00021 31.7 7.2 82 2-93 50-136 (375)
368 4gua_A Non-structural polyprot 79.1 1 3.5E-05 39.0 2.6 38 55-92 214-268 (670)
369 2j8z_A Quinone oxidoreductase; 77.9 5.9 0.0002 31.2 6.6 74 8-93 183-261 (354)
370 2eez_A Alanine dehydrogenase; 77.5 1.4 4.9E-05 35.3 3.0 72 14-94 189-267 (369)
371 2hcy_A Alcohol dehydrogenase 1 77.3 1.8 6.3E-05 34.0 3.5 72 8-93 190-269 (347)
372 3gqv_A Enoyl reductase; medium 77.0 1.2 4.2E-05 35.5 2.4 79 2-93 178-263 (371)
373 3pxx_A Carveol dehydrogenase; 76.7 11 0.00038 28.2 7.7 80 9-93 29-153 (287)
374 1wma_A Carbonyl reductase [NAD 76.2 4.6 0.00016 29.8 5.3 59 10-73 24-93 (276)
375 2vhw_A Alanine dehydrogenase; 76.1 1.6 5.5E-05 35.2 2.9 70 15-93 192-268 (377)
376 3pvc_A TRNA 5-methylaminomethy 75.3 1.2 4E-05 38.8 1.9 48 46-93 150-211 (689)
377 1g55_A DNA cytosine methyltran 75.1 2.4 8.3E-05 33.7 3.6 63 2-73 13-79 (343)
378 3k31_A Enoyl-(acyl-carrier-pro 74.7 13 0.00046 28.3 7.8 59 9-73 51-119 (296)
379 3gaz_A Alcohol dehydrogenase s 73.6 1 3.5E-05 35.6 1.0 72 7-94 170-247 (343)
380 1eg2_A Modification methylase 73.2 1 3.5E-05 35.7 1.0 50 46-95 39-108 (319)
381 3vyw_A MNMC2; tRNA wobble urid 73.1 1 3.4E-05 35.9 0.9 49 46-94 168-227 (308)
382 4eso_A Putative oxidoreductase 72.9 9.1 0.00031 28.5 6.3 56 10-73 28-93 (255)
383 3snk_A Response regulator CHEY 71.3 16 0.00055 23.6 6.6 73 15-94 15-95 (135)
384 1v3u_A Leukotriene B4 12- hydr 70.7 2.3 7.8E-05 33.1 2.5 70 14-93 170-244 (333)
385 1yb5_A Quinone oxidoreductase; 70.3 4.4 0.00015 32.0 4.1 73 8-93 191-269 (351)
386 1g60_A Adenine-specific methyl 69.8 0.86 2.9E-05 34.7 -0.2 49 46-94 5-75 (260)
387 2zb4_A Prostaglandin reductase 68.9 4.8 0.00016 31.6 4.0 74 8-92 181-259 (357)
388 1y1p_A ARII, aldehyde reductas 68.8 33 0.0011 25.9 8.8 68 2-73 21-94 (342)
389 4dad_A Putative pilus assembly 68.3 11 0.00037 24.7 5.3 75 14-94 20-103 (146)
390 1id1_A Putative potassium chan 67.8 22 0.00076 24.0 6.9 78 10-95 22-107 (153)
391 2px2_A Genome polyprotein [con 67.4 6.7 0.00023 30.6 4.4 46 46-93 124-183 (269)
392 3to5_A CHEY homolog; alpha(5)b 67.4 2.9 0.0001 28.7 2.2 69 10-83 8-79 (134)
393 2hwk_A Helicase NSP2; rossman 67.2 3 0.0001 33.1 2.4 34 61-94 205-255 (320)
394 3pk0_A Short-chain dehydrogena 65.5 11 0.00036 28.2 5.2 59 10-72 30-98 (262)
395 3kto_A Response regulator rece 64.3 16 0.00054 23.7 5.4 74 15-94 7-88 (136)
396 2c7p_A Modification methylase 64.1 15 0.00052 28.9 6.1 60 2-73 22-82 (327)
397 3ijr_A Oxidoreductase, short c 64.1 36 0.0012 25.7 8.1 79 10-93 67-182 (291)
398 3is3_A 17BETA-hydroxysteroid d 63.8 36 0.0012 25.3 8.0 80 10-94 38-153 (270)
399 3h2s_A Putative NADH-flavin re 63.7 36 0.0012 24.0 8.0 81 2-93 10-104 (224)
400 3f6c_A Positive transcription 63.5 23 0.00079 22.5 6.1 74 16-94 3-82 (134)
401 1qo0_D AMIR; binding protein, 63.2 34 0.0012 23.6 9.6 72 15-94 13-87 (196)
402 3rih_A Short chain dehydrogena 62.3 10 0.00036 29.0 4.7 59 10-72 61-129 (293)
403 3ew7_A LMO0794 protein; Q8Y8U8 62.0 29 0.00098 24.4 6.9 80 2-93 10-102 (221)
404 1g0o_A Trihydroxynaphthalene r 61.5 32 0.0011 25.7 7.4 79 10-93 49-163 (283)
405 3i1j_A Oxidoreductase, short c 60.7 35 0.0012 24.7 7.3 59 10-72 34-104 (247)
406 3gcz_A Polyprotein; flavivirus 60.1 1.4 4.9E-05 34.6 -0.6 75 13-93 113-201 (282)
407 3lyl_A 3-oxoacyl-(acyl-carrier 60.0 35 0.0012 24.7 7.2 60 9-73 24-93 (247)
408 3eul_A Possible nitrate/nitrit 59.3 12 0.0004 24.8 4.1 79 13-95 14-98 (152)
409 3r3s_A Oxidoreductase; structu 59.1 36 0.0012 25.7 7.3 79 10-93 69-185 (294)
410 1fmc_A 7 alpha-hydroxysteroid 58.9 23 0.00079 25.7 6.0 59 9-72 30-98 (255)
411 2qvg_A Two component response 58.6 20 0.00069 23.1 5.2 77 14-94 7-97 (143)
412 1ae1_A Tropinone reductase-I; 58.5 23 0.00078 26.4 6.0 59 9-72 40-109 (273)
413 4g81_D Putative hexonate dehyd 58.3 19 0.00064 27.4 5.5 59 10-73 29-97 (255)
414 3c85_A Putative glutathione-re 58.3 14 0.00048 25.8 4.5 70 14-94 63-140 (183)
415 2aef_A Calcium-gated potassium 58.2 50 0.0017 23.9 8.0 82 2-95 18-107 (234)
416 1qkk_A DCTD, C4-dicarboxylate 58.1 14 0.00047 24.5 4.3 75 14-94 3-83 (155)
417 3kht_A Response regulator; PSI 57.2 27 0.00093 22.6 5.7 76 15-94 6-89 (144)
418 3ce6_A Adenosylhomocysteinase; 57.1 24 0.00083 29.7 6.4 63 15-93 298-361 (494)
419 2vz8_A Fatty acid synthase; tr 57.0 19 0.00065 36.3 6.4 78 7-92 1687-1769(2512)
420 1boo_A Protein (N-4 cytosine-s 56.6 12 0.00043 29.2 4.3 33 2-36 264-296 (323)
421 1k68_A Phytochrome response re 56.1 21 0.00072 22.7 4.8 58 14-75 2-68 (140)
422 3v2g_A 3-oxoacyl-[acyl-carrier 56.0 60 0.0021 24.2 8.6 81 9-94 50-166 (271)
423 4egf_A L-xylulose reductase; s 55.9 28 0.00095 25.9 6.1 60 10-73 40-109 (266)
424 3heb_A Response regulator rece 55.9 33 0.0011 22.4 6.0 57 15-75 5-72 (152)
425 2ae2_A Protein (tropinone redu 55.9 23 0.00077 26.2 5.5 59 9-72 28-97 (260)
426 3ps9_A TRNA 5-methylaminomethy 55.7 4.6 0.00016 34.8 1.8 48 46-93 158-219 (676)
427 3f1l_A Uncharacterized oxidore 55.5 33 0.0011 25.2 6.4 59 10-72 32-102 (252)
428 2jah_A Clavulanic acid dehydro 55.1 29 0.001 25.4 6.0 58 10-72 27-94 (247)
429 3ius_A Uncharacterized conserv 55.1 58 0.002 23.9 7.8 59 2-73 14-74 (286)
430 2gdz_A NAD+-dependent 15-hydro 55.1 32 0.0011 25.4 6.3 62 9-73 26-97 (267)
431 3eod_A Protein HNR; response r 54.7 17 0.0006 23.1 4.2 75 14-94 7-87 (130)
432 3p8z_A Mtase, non-structural p 54.1 8.9 0.00031 29.7 2.9 76 7-91 96-184 (267)
433 4fn4_A Short chain dehydrogena 54.0 38 0.0013 25.6 6.6 58 10-72 27-94 (254)
434 3awd_A GOX2181, putative polyo 54.0 24 0.00081 25.8 5.3 59 9-72 32-100 (260)
435 1k66_A Phytochrome response re 53.9 22 0.00074 23.0 4.7 67 14-84 6-85 (149)
436 1mxh_A Pteridine reductase 2; 53.2 39 0.0014 25.0 6.6 59 10-72 31-104 (276)
437 1xg5_A ARPG836; short chain de 53.2 32 0.0011 25.6 6.0 60 10-72 52-121 (279)
438 3llv_A Exopolyphosphatase-rela 53.0 31 0.001 22.8 5.4 71 12-94 27-104 (141)
439 1yb1_A 17-beta-hydroxysteroid 53.0 42 0.0014 24.9 6.7 58 10-72 51-118 (272)
440 3eqz_A Response regulator; str 53.0 40 0.0014 21.2 6.8 73 15-94 4-82 (135)
441 3gt7_A Sensor protein; structu 52.9 9.9 0.00034 25.4 2.8 56 14-75 7-64 (154)
442 2jba_A Phosphate regulon trans 52.8 13 0.00045 23.5 3.3 55 15-75 3-59 (127)
443 1e7w_A Pteridine reductase; di 52.7 54 0.0018 24.7 7.4 58 10-72 29-115 (291)
444 3l9w_A Glutathione-regulated p 52.6 39 0.0013 27.5 6.8 71 13-94 26-103 (413)
445 2pd4_A Enoyl-[acyl-carrier-pro 52.6 23 0.0008 26.4 5.2 59 9-73 27-95 (275)
446 2qrv_A DNA (cytosine-5)-methyl 52.6 17 0.00059 28.3 4.5 63 2-73 27-94 (295)
447 3o38_A Short chain dehydrogena 52.5 42 0.0014 24.6 6.6 60 9-72 42-111 (266)
448 3d4o_A Dipicolinate synthase s 52.5 41 0.0014 25.6 6.7 66 14-93 178-244 (293)
449 4imr_A 3-oxoacyl-(acyl-carrier 52.0 30 0.001 26.0 5.8 59 9-72 52-119 (275)
450 2rhc_B Actinorhodin polyketide 51.5 44 0.0015 24.9 6.6 58 10-72 42-109 (277)
451 3lua_A Response regulator rece 51.3 37 0.0013 21.8 5.5 75 14-94 4-89 (140)
452 1xq1_A Putative tropinone redu 51.2 35 0.0012 25.0 5.9 59 9-72 33-102 (266)
453 2vz8_A Fatty acid synthase; tr 50.9 7.4 0.00025 39.1 2.5 71 16-93 1271-1348(2512)
454 3e8x_A Putative NAD-dependent 50.4 54 0.0018 23.4 6.8 61 2-73 31-95 (236)
455 2nwq_A Probable short-chain de 50.1 77 0.0026 23.6 8.3 57 10-72 41-107 (272)
456 1w6u_A 2,4-dienoyl-COA reducta 50.1 34 0.0012 25.6 5.8 59 10-72 46-114 (302)
457 3p2y_A Alanine dehydrogenase/p 50.1 40 0.0014 27.4 6.4 80 7-96 202-305 (381)
458 3t4x_A Oxidoreductase, short c 49.7 46 0.0016 24.6 6.4 61 9-73 29-96 (267)
459 4e7p_A Response regulator; DNA 49.5 41 0.0014 22.0 5.6 76 15-95 21-103 (150)
460 3nzo_A UDP-N-acetylglucosamine 49.4 55 0.0019 26.0 7.2 70 2-74 45-124 (399)
461 2b4a_A BH3024; flavodoxin-like 49.1 28 0.00095 22.4 4.6 75 13-93 14-95 (138)
462 1eg2_A Modification methylase 48.8 19 0.00066 28.2 4.3 34 2-37 254-290 (319)
463 1i3c_A Response regulator RCP1 48.7 22 0.00074 23.4 4.0 59 14-76 8-75 (149)
464 2c07_A 3-oxoacyl-(acyl-carrier 48.6 53 0.0018 24.5 6.7 60 9-73 63-132 (285)
465 4ibo_A Gluconate dehydrogenase 48.5 26 0.0009 26.2 4.9 60 9-73 45-114 (271)
466 3grc_A Sensor protein, kinase; 48.1 10 0.00035 24.6 2.2 75 14-94 6-88 (140)
467 1geg_A Acetoin reductase; SDR 48.0 33 0.0011 25.2 5.3 58 10-72 22-89 (256)
468 2rir_A Dipicolinate synthase, 48.0 47 0.0016 25.3 6.4 66 14-93 180-246 (300)
469 3hn7_A UDP-N-acetylmuramate-L- 47.7 55 0.0019 27.3 7.2 72 14-96 43-131 (524)
470 3cxt_A Dehydrogenase with diff 47.7 48 0.0016 25.1 6.3 58 10-72 54-121 (291)
471 3eld_A Methyltransferase; flav 47.7 43 0.0015 26.4 6.0 34 60-93 145-191 (300)
472 1dbw_A Transcriptional regulat 47.5 24 0.00081 22.3 4.0 74 15-94 4-83 (126)
473 2qhx_A Pteridine reductase 1; 46.5 79 0.0027 24.3 7.5 58 10-72 66-152 (328)
474 2p91_A Enoyl-[acyl-carrier-pro 46.1 63 0.0021 24.1 6.7 58 10-73 43-110 (285)
475 2qxy_A Response regulator; reg 46.0 26 0.0009 22.6 4.1 74 14-94 4-83 (142)
476 3ggo_A Prephenate dehydrogenas 45.6 1E+02 0.0035 23.7 8.3 66 15-94 59-128 (314)
477 4h0n_A DNMT2; SAH binding, tra 45.6 13 0.00044 29.5 2.7 62 4-74 16-81 (333)
478 2b4q_A Rhamnolipids biosynthes 45.5 33 0.0011 25.7 5.0 57 10-72 49-115 (276)
479 1xhf_A DYE resistance, aerobic 45.4 14 0.00047 23.3 2.5 74 15-94 4-82 (123)
480 3qv2_A 5-cytosine DNA methyltr 45.3 23 0.00078 28.0 4.2 64 2-75 21-89 (327)
481 3nbm_A PTS system, lactose-spe 45.3 62 0.0021 21.2 6.4 64 26-94 22-85 (108)
482 2uvd_A 3-oxoacyl-(acyl-carrier 45.0 40 0.0014 24.5 5.3 59 10-73 24-93 (246)
483 4dio_A NAD(P) transhydrogenase 44.9 35 0.0012 28.0 5.3 35 61-95 274-314 (405)
484 4f6c_A AUSA reductase domain p 44.8 84 0.0029 24.8 7.6 69 2-73 79-161 (427)
485 3v2h_A D-beta-hydroxybutyrate 44.7 50 0.0017 24.7 6.0 61 9-73 44-115 (281)
486 3r1i_A Short-chain type dehydr 44.7 23 0.00078 26.7 4.0 60 9-73 51-120 (276)
487 2rjn_A Response regulator rece 44.3 22 0.00074 23.5 3.5 75 14-94 7-87 (154)
488 4g65_A TRK system potassium up 44.3 45 0.0015 27.5 6.0 61 2-71 244-309 (461)
489 4f6l_B AUSA reductase domain p 44.0 80 0.0027 25.8 7.5 69 2-73 160-242 (508)
490 2gn4_A FLAA1 protein, UDP-GLCN 43.9 48 0.0016 25.6 5.9 53 16-75 49-104 (344)
491 2zat_A Dehydrogenase/reductase 43.1 44 0.0015 24.5 5.3 58 10-72 34-101 (260)
492 3mm4_A Histidine kinase homolo 42.9 23 0.00078 25.2 3.6 58 14-76 61-133 (206)
493 3gl9_A Response regulator; bet 42.5 10 0.00035 24.2 1.5 56 15-76 3-60 (122)
494 3ruf_A WBGU; rossmann fold, UD 42.3 48 0.0016 25.3 5.6 69 2-73 35-111 (351)
495 3hv2_A Response regulator/HD d 42.1 56 0.0019 21.3 5.3 75 14-94 14-94 (153)
496 4da9_A Short-chain dehydrogena 41.8 84 0.0029 23.4 6.9 58 10-72 49-117 (280)
497 1tmy_A CHEY protein, TMY; chem 41.8 33 0.0011 21.3 3.9 75 15-94 3-83 (120)
498 3jte_A Response regulator rece 41.7 22 0.00075 23.0 3.1 74 15-94 4-85 (143)
499 2km1_A Protein DRE2; yeast, an 41.3 16 0.00054 25.5 2.3 65 22-91 20-96 (136)
500 3crn_A Response regulator rece 41.3 46 0.0016 21.1 4.7 74 15-94 4-83 (132)
No 1
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.74 E-value=6.7e-18 Score=129.10 Aligned_cols=121 Identities=26% Similarity=0.391 Sum_probs=103.5
Q ss_pred chHHH-HHHhcCC-----CCEEEEEeCCHHHHHHHHHHHhhhcC-----CCCccceEEEEccCCCCCCCCCCcCEEEEcc
Q psy14971 2 GDLNV-IVGIKGE-----RALVLILNHYMKVKSKNQNNKKLNIK-----QNRKSFKNVSVKDGSKGHAEEGPYDIIHLGA 70 (156)
Q Consensus 2 G~la~-la~l~g~-----~g~V~avD~~~~~~~~A~~~l~~~~g-----~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~ 70 (156)
|+++. +++..+. .++|+++|+++++++.|+++++.. + ..| ++++.+|+.+.++..++||+|+++.
T Consensus 96 G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~---v~~~~~d~~~~~~~~~~fD~I~~~~ 171 (227)
T 1r18_A 96 GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTD-DRSMLDSGQ---LLIVEGDGRKGYPPNAPYNAIHVGA 171 (227)
T ss_dssp SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHH-HHHHHHHTS---EEEEESCGGGCCGGGCSEEEEEECS
T ss_pred cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhc-CccccCCCc---eEEEECCcccCCCcCCCccEEEECC
Confidence 66665 4555553 469999999999999999999873 5 567 9999999987666557899999999
Q ss_pred CCCchHHHHHhhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeec
Q psy14971 71 ACIEVPKEILAQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPL 127 (156)
Q Consensus 71 ~~~~i~~~l~~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL 127 (156)
+.+++++.+.++|||||+|++++..... .+.+..++|..++.++.+.++.+.|+||
T Consensus 172 ~~~~~~~~~~~~LkpgG~lvi~~~~~~~-~~~l~~~~~~~~~~~~~~~l~~~~~~p~ 227 (227)
T 1r18_A 172 AAPDTPTELINQLASGGRLIVPVGPDGG-SQYMQQYDKDANGKVEMTRLMGVMYVPL 227 (227)
T ss_dssp CBSSCCHHHHHTEEEEEEEEEEESCSSS-CEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred chHHHHHHHHHHhcCCCEEEEEEecCCC-ceEEEEEEEcCCCcEEEEEeccEEEeeC
Confidence 9999999999999999999999986444 5888899997677899999999999996
No 2
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.74 E-value=3e-17 Score=123.47 Aligned_cols=119 Identities=23% Similarity=0.268 Sum_probs=104.0
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHH
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
|.++.. ++. .++|+++|+++++++.|+++++. .+++| ++++.+|+.+.....++||+|+++...+.+++.+.
T Consensus 89 G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~-~~~~~---v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~ 161 (210)
T 3lbf_A 89 GYQTAILAHL---VQHVCSVERIKGLQWQARRRLKN-LDLHN---VSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALM 161 (210)
T ss_dssp SHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHH-TTCCS---EEEEESCGGGCCGGGCCEEEEEESSBCSSCCTHHH
T ss_pred CHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHH-cCCCc---eEEEECCcccCCccCCCccEEEEccchhhhhHHHH
Confidence 667654 444 48999999999999999999998 48888 99999999887666789999999999999999999
Q ss_pred hhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCCC
Q psy14971 81 AQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGLI 131 (156)
Q Consensus 81 ~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~~ 131 (156)
++|||||+|++++++ + .+.+..++|. ++.+..+.++.+.|+||.++.
T Consensus 162 ~~L~pgG~lv~~~~~-~--~~~~~~~~~~-~~~~~~~~~~~~~f~pl~~~~ 208 (210)
T 3lbf_A 162 TQLDEGGILVLPVGE-E--HQYLKRVRRR-GGEFIIDTVEAVRFVPLVKGE 208 (210)
T ss_dssp HTEEEEEEEEEEECS-S--SCEEEEEEEE-TTEEEEEEEEECCCCBCCCSS
T ss_pred HhcccCcEEEEEEcC-C--ceEEEEEEEc-CCeEEEEEeccEEEEEccCcc
Confidence 999999999999987 3 4788888886 567999999999999998864
No 3
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.74 E-value=2.4e-17 Score=125.47 Aligned_cols=124 Identities=35% Similarity=0.505 Sum_probs=105.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcC-----CCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIK-----QNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g-----~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i 75 (156)
|.++. +++..++.++|+++|+++++++.|+++++.. + .++ ++++.+|+.......++||+|+++..++++
T Consensus 89 G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~---v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~ 164 (226)
T 1i1n_A 89 GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD-DPTLLSSGR---VQLVVGDGRMGYAEEAPYDAIHVGAAAPVV 164 (226)
T ss_dssp SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-CTHHHHTSS---EEEEESCGGGCCGGGCCEEEEEECSBBSSC
T ss_pred CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh-cccccCCCc---EEEEECCcccCcccCCCcCEEEECCchHHH
Confidence 66665 5667777789999999999999999999873 5 357 999999987655556789999999999999
Q ss_pred HHHHHhhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCC
Q psy14971 76 PKEILAQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGL 130 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~ 130 (156)
++.+.++|||||+|++++++... .+.+..+++..++.++.+.++.+.|+|+.+.
T Consensus 165 ~~~~~~~LkpgG~lv~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~ 218 (226)
T 1i1n_A 165 PQALIDQLKPGGRLILPVGPAGG-NQMLEQYDKLQDGSIKMKPLMGVIYVPLTDK 218 (226)
T ss_dssp CHHHHHTEEEEEEEEEEESCTTS-CEEEEEEEECTTSCEEEEEEEEECCCBCCCH
T ss_pred HHHHHHhcCCCcEEEEEEecCCC-ceEEEEEEEcCCCcEEEEEcCceEEEeccCC
Confidence 99999999999999999987544 4667778887677899999999999999874
No 4
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.73 E-value=4.4e-17 Score=125.27 Aligned_cols=127 Identities=24% Similarity=0.303 Sum_probs=106.7
Q ss_pred CchHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHH
Q psy14971 1 MGDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 1 ~G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l 79 (156)
.|+++.. ++..+ ++|+++|+++++++.|+++++. .++.+ ++++.+|+...++...+||+|+++.+.+.+++.+
T Consensus 102 ~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~-~~~~~---v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~~~~~ 175 (235)
T 1jg1_A 102 SGWNAALISEIVK--TDVYTIERIPELVEFAKRNLER-AGVKN---VHVILGDGSKGFPPKAPYDVIIVTAGAPKIPEPL 175 (235)
T ss_dssp TSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHH-TTCCS---EEEEESCGGGCCGGGCCEEEEEECSBBSSCCHHH
T ss_pred cCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHH-cCCCC---cEEEECCcccCCCCCCCccEEEECCcHHHHHHHH
Confidence 3667754 45544 8999999999999999999998 48888 9999999866666656799999999999999999
Q ss_pred HhhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCCCCccc
Q psy14971 80 LAQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGLISLKE 135 (156)
Q Consensus 80 ~~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~~~~~~ 135 (156)
.++|+|||+|+++++.... .+.+..++|. ++.+..+.++.+.|+|+.+..++++
T Consensus 176 ~~~L~pgG~lvi~~~~~~~-~~~l~~~~~~-~~~~~~~~~~~~~f~p~~~~~~~~~ 229 (235)
T 1jg1_A 176 IEQLKIGGKLIIPVGSYHL-WQELLEVRKT-KDGIKIKNHGGVAFVPLIGEYGWKE 229 (235)
T ss_dssp HHTEEEEEEEEEEECSSSS-CEEEEEEEEE-TTEEEEEEEEEECCCBCBSTTSBC-
T ss_pred HHhcCCCcEEEEEEecCCC-ccEEEEEEEe-CCeEEEEEeccEEEEEccCCCcchh
Confidence 9999999999999986542 3778888885 6679999999999999998876654
No 5
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.71 E-value=4.3e-17 Score=124.15 Aligned_cols=121 Identities=22% Similarity=0.240 Sum_probs=102.9
Q ss_pred chHHH-HHHhcC----CCCEEEEEeCCHHHHHHHHHHHhhhcC-----CCCccceEEEEccCCCCC----CCCCCcCEEE
Q psy14971 2 GDLNV-IVGIKG----ERALVLILNHYMKVKSKNQNNKKLNIK-----QNRKSFKNVSVKDGSKGH----AEEGPYDIIH 67 (156)
Q Consensus 2 G~la~-la~l~g----~~g~V~avD~~~~~~~~A~~~l~~~~g-----~~n~~~v~~~~gD~~~~~----~~~~~fD~I~ 67 (156)
|+++. +++..+ +.++|+++|+++++++.|+++++.. + ..| ++++.+|+.+.+ ...++||+|+
T Consensus 92 G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~---v~~~~~d~~~~~~~~~~~~~~fD~I~ 167 (227)
T 2pbf_A 92 GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD-KPELLKIDN---FKIIHKNIYQVNEEEKKELGLFDAIH 167 (227)
T ss_dssp SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGSSTT---EEEEECCGGGCCHHHHHHHCCEEEEE
T ss_pred CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc-CccccccCC---EEEEECChHhcccccCccCCCcCEEE
Confidence 66665 466665 6789999999999999999999884 7 567 999999998765 4457899999
Q ss_pred EccCCCchHHHHHhhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCC
Q psy14971 68 LGAACIEVPKEILAQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGG 129 (156)
Q Consensus 68 i~~~~~~i~~~l~~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~ 129 (156)
+++..+++++.+.++|+|||+|++++.... .+.+..++| .++.|..+.++.+.|+||.+
T Consensus 168 ~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~pl~~ 226 (227)
T 2pbf_A 168 VGASASELPEILVDLLAENGKLIIPIEEDY--TQVLYEITK-KNGKIIKDRLFDVCFVSLKK 226 (227)
T ss_dssp ECSBBSSCCHHHHHHEEEEEEEEEEEEETT--EEEEEEEEC-SCC-CEEEEEEEECCCBCCC
T ss_pred ECCchHHHHHHHHHhcCCCcEEEEEEccCC--ceEEEEEEE-eCCeEEEEEeccEEEEeccC
Confidence 999999999999999999999999998643 478888888 56789999999999999975
No 6
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.69 E-value=5.2e-16 Score=117.08 Aligned_cols=124 Identities=26% Similarity=0.344 Sum_probs=105.8
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
|.++. +++..++.++|+++|+++++++.|++++.. .+.++ ++++.+|+...++..++||+|+++...+++++.+.
T Consensus 89 G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~---v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~ 164 (215)
T 2yxe_A 89 GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK-LGYDN---VIVIVGDGTLGYEPLAPYDRIYTTAAGPKIPEPLI 164 (215)
T ss_dssp SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-HTCTT---EEEEESCGGGCCGGGCCEEEEEESSBBSSCCHHHH
T ss_pred cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCC---eEEEECCcccCCCCCCCeeEEEECCchHHHHHHHH
Confidence 66665 466666778999999999999999999998 48888 99999998766655678999999999999999999
Q ss_pred hhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCCCCc
Q psy14971 81 AQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGLISL 133 (156)
Q Consensus 81 ~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~~~~ 133 (156)
++|||||+|++.+.+. .+.+..++|. ++.+..+.++.+.|+|+.+..+|
T Consensus 165 ~~L~pgG~lv~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~ 213 (215)
T 2yxe_A 165 RQLKDGGKLLMPVGRY---LQRLVLAEKR-GDEIIIKDCGPVAFVPLVGKEGF 213 (215)
T ss_dssp HTEEEEEEEEEEESSS---SEEEEEEEEE-TTEEEEEEEEEECCCBCBSTTSB
T ss_pred HHcCCCcEEEEEECCC---CcEEEEEEEe-CCEEEEEEeccEEEEeccccccC
Confidence 9999999999998764 2677778776 45799999999999999887664
No 7
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.58 E-value=1.4e-14 Score=110.35 Aligned_cols=133 Identities=20% Similarity=0.241 Sum_probs=107.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHHh
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEILA 81 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~~ 81 (156)
|.++......+ .+|+++|+++++++.|++++.. .+ + ++++.+|+.+..+..++||+|+++...+++++.+.+
T Consensus 82 G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~-~~--~---v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~ 153 (231)
T 1vbf_A 82 GYYTALIAEIV--DKVVSVEINEKMYNYASKLLSY-YN--N---IKLILGDGTLGYEEEKPYDRVVVWATAPTLLCKPYE 153 (231)
T ss_dssp SHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTT-CS--S---EEEEESCGGGCCGGGCCEEEEEESSBBSSCCHHHHH
T ss_pred CHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhh-cC--C---eEEEECCcccccccCCCccEEEECCcHHHHHHHHHH
Confidence 66665433333 7999999999999999999987 35 7 999999987755556789999999999999999999
Q ss_pred hCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCCCCccccchhhhhhcc
Q psy14971 82 QLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGLISLKEQMDEYKVQLQ 145 (156)
Q Consensus 82 ~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~~~~~~~~~~~~~~~~ 145 (156)
+|+|||+|++...+.. .+.+..+.+. ++.+....++.+.|.|+.+..+|......|..+..
T Consensus 154 ~L~pgG~l~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gf~~~~~~~~~~~~ 214 (231)
T 1vbf_A 154 QLKEGGIMILPIGVGR--VQKLYKVIKK-GNSPSLENLGEVMFGRIGGLYGFYDDYDDIEFRVN 214 (231)
T ss_dssp TEEEEEEEEEEECSSS--SEEEEEEECC-TTSCEEEEEEEECCCBCCSTTSCSSCCCCHHHHHH
T ss_pred HcCCCcEEEEEEcCCC--ccEEEEEEEc-CCeeEEEEeccEEEEEcCCccchhhhcchHHHHhh
Confidence 9999999999987654 3667777665 45688899999999999988888555566665543
No 8
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.52 E-value=8.9e-14 Score=111.69 Aligned_cols=123 Identities=23% Similarity=0.257 Sum_probs=100.8
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHH
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
|.++.. ++..+..++|+++|+++++++.|+++++. .|++| ++++.+|+.+..+..++||+|+++.+.+++++.+.
T Consensus 87 G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~g~~~---v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~~~~~ 162 (317)
T 1dl5_A 87 GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVER-LGIEN---VIFVCGDGYYGVPEFSPYDVIFVTVGVDEVPETWF 162 (317)
T ss_dssp SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-TTCCS---EEEEESCGGGCCGGGCCEEEEEECSBBSCCCHHHH
T ss_pred hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHH-cCCCC---eEEEECChhhccccCCCeEEEEEcCCHHHHHHHHH
Confidence 677754 55544458899999999999999999998 48888 99999999876555678999999999999999999
Q ss_pred hhCCCCcEEEEEeccCC-CcceEEEEEEEcCCCcEEEEEeeceEeeecCCC
Q psy14971 81 AQLKPGGRLVFHKGLHN-GHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGL 130 (156)
Q Consensus 81 ~~L~pGGrLv~~~~~~~-~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~ 130 (156)
++|||||+|++.+.+.. . .+.+..+.+. .+.+..+.++...+.|+.+.
T Consensus 163 ~~LkpgG~lvi~~~~~~~~-~~~~~~~~~~-~~~~~~~~i~~~~~~p~~~~ 211 (317)
T 1dl5_A 163 TQLKEGGRVIVPINLKLSR-RQPAFLFKKK-DPYLVGNYKLETRFITAGGN 211 (317)
T ss_dssp HHEEEEEEEEEEBCBGGGT-BCEEEEEEEE-TTEEEEEEEEECCCCBCCGG
T ss_pred HhcCCCcEEEEEECCCCcc-cceEEEEEEe-CCcEEEEEeccEEEEEccCc
Confidence 99999999999987643 1 2566667675 34799999999999887653
No 9
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.44 E-value=4e-13 Score=100.63 Aligned_cols=140 Identities=9% Similarity=-0.023 Sum_probs=97.2
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---H
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---K 77 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---~ 77 (156)
.|.+++.+...++.++|+++|+++++++.|++|++.. ++++ ++++.+|+.+..+...+||+|+++....... +
T Consensus 51 ~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~---v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~l~ 126 (204)
T 3e05_A 51 SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF-VARN---VTLVEAFAPEGLDDLPDPDRVFIGGSGGMLEEIID 126 (204)
T ss_dssp TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH-TCTT---EEEEECCTTTTCTTSCCCSEEEESCCTTCHHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh-CCCc---EEEEeCChhhhhhcCCCCCEEEECCCCcCHHHHHH
Confidence 3777776555577799999999999999999999984 8878 9999999977666557899999998866444 5
Q ss_pred HHHhhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCCCCccccchhhhhhcc
Q psy14971 78 EILAQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGLISLKEQMDEYKVQLQ 145 (156)
Q Consensus 78 ~l~~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~~~~~~~~~~~~~~~~ 145 (156)
.+.+.|+|||++++....... ...+....+..+-.+....+......++.....|..+.+.|-+--.
T Consensus 127 ~~~~~LkpgG~l~~~~~~~~~-~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~i~~~~ 193 (204)
T 3e05_A 127 AVDRRLKSEGVIVLNAVTLDT-LTKAVEFLEDHGYMVEVACVNVAKTKGLTEYKMFESHNPVYIITAW 193 (204)
T ss_dssp HHHHHCCTTCEEEEEECBHHH-HHHHHHHHHHTTCEEEEEEEEEEEEC---CCCBCEECCCEEEEEEE
T ss_pred HHHHhcCCCeEEEEEeccccc-HHHHHHHHHHCCCceeEEEEEeecceEccceEEeccCCCeEEEEEE
Confidence 678899999999997653221 1222222122122344555555666677777777777766655443
No 10
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.39 E-value=4.3e-13 Score=101.38 Aligned_cols=131 Identities=13% Similarity=0.106 Sum_probs=92.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCc-hHHH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE-VPKE 78 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~-i~~~ 78 (156)
.|.+++.+... .++|+++|+++++++.|++|++. .+++ | ++++.+|+.+..+...+||+|+++.+... +.+.
T Consensus 66 ~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~-~g~~~~---v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~ 139 (204)
T 3njr_A 66 SGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDT-YGLSPR---MRAVQGTAPAALADLPLPEAVFIGGGGSQALYDR 139 (204)
T ss_dssp TCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-TTCTTT---EEEEESCTTGGGTTSCCCSEEEECSCCCHHHHHH
T ss_pred CCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHH-cCCCCC---EEEEeCchhhhcccCCCCCEEEECCcccHHHHHH
Confidence 36777644333 58999999999999999999998 4887 7 99999999875555568999999986533 5567
Q ss_pred HHhhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCCCCccccchhh
Q psy14971 79 ILAQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGLISLKEQMDEY 140 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~~~~~~~~~~~ 140 (156)
+.+.|||||++++.....+. ...+..+.+.. + +....+......++.+...|....+.+
T Consensus 140 ~~~~LkpgG~lv~~~~~~~~-~~~~~~~l~~~-g-~~i~~i~~~~~~~~~~~~~~~~~~Pv~ 198 (204)
T 3njr_A 140 LWEWLAPGTRIVANAVTLES-ETLLTQLHARH-G-GQLLRIDIAQAEPLGRMRGWSASRPQL 198 (204)
T ss_dssp HHHHSCTTCEEEEEECSHHH-HHHHHHHHHHH-C-SEEEEEEEEEEEEETTEEEECCCCCEE
T ss_pred HHHhcCCCcEEEEEecCccc-HHHHHHHHHhC-C-CcEEEEEeecccccCccceeecCCCEE
Confidence 78999999999998764322 22222211221 2 455555556666777666666665544
No 11
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.34 E-value=9.6e-13 Score=95.73 Aligned_cols=135 Identities=13% Similarity=0.121 Sum_probs=93.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCC-CCcCEEEEccCCCc--hHH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEE-GPYDIIHLGAACIE--VPK 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~-~~fD~I~i~~~~~~--i~~ 77 (156)
|.++..+....+..+|+++|+++++++.|+++++. .+.. + + ++.+|+.+.++.. ++||+|+++..... +.+
T Consensus 37 G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~---~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~~~~l~ 111 (178)
T 3hm2_A 37 GSIAIEWLRSTPQTTAVCFEISEERRERILSNAIN-LGVSDR---I-AVQQGAPRAFDDVPDNPDVIFIGGGLTAPGVFA 111 (178)
T ss_dssp THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHT-TTCTTS---E-EEECCTTGGGGGCCSCCSEEEECC-TTCTTHHH
T ss_pred CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHH-hCCCCC---E-EEecchHhhhhccCCCCCEEEECCcccHHHHHH
Confidence 66666544444568999999999999999999998 4876 6 8 8889987655543 78999999998775 567
Q ss_pred HHHhhCCCCcEEEEEeccCCCcceEEEEEEEcCCCcEEEEEeeceEeeecCCCCCccccchhhhhhc
Q psy14971 78 EILAQLKPGGRLVFHKGLHNGHYQSLAYIDRLPNGTYLREKSGYPIDKPLGGLISLKEQMDEYKVQL 144 (156)
Q Consensus 78 ~l~~~L~pGGrLv~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~~~pL~~~~~~~~~~~~~~~~~ 144 (156)
.+.+.|+|||++++.....+. ...+..+.+..+ +....+......++.....|....+.|.+.+
T Consensus 112 ~~~~~L~~gG~l~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~ 175 (178)
T 3hm2_A 112 AAWKRLPVGGRLVANAVTVES-EQMLWALRKQFG--GTISSFAISHEHTVGSFITMKPALPVHQWTV 175 (178)
T ss_dssp HHHHTCCTTCEEEEEECSHHH-HHHHHHHHHHHC--CEEEEEEEEEEEECSSCEEEEECCCEEEEEE
T ss_pred HHHHhcCCCCEEEEEeecccc-HHHHHHHHHHcC--CeeEEEEeecCcccCCceeecCCCCeEEEEE
Confidence 888999999999997653321 122221112212 3334444456667787777777777665543
No 12
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.32 E-value=1e-11 Score=99.70 Aligned_cols=76 Identities=12% Similarity=0.093 Sum_probs=65.7
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC---chHHHHHhhCCCCcEE
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI---EVPKEILAQLKPGGRL 89 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~---~i~~~l~~~L~pGGrL 89 (156)
++++|+++|+++++++.|++++++ .|+++ +++++||+.+ ++ .++||+|++.+..+ .+.+.+.++|||||+|
T Consensus 145 ~ga~V~gIDis~~~l~~Ar~~~~~-~gl~~---v~~v~gDa~~-l~-d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~L 218 (298)
T 3fpf_A 145 YGMRVNVVEIEPDIAELSRKVIEG-LGVDG---VNVITGDETV-ID-GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRI 218 (298)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHH-HTCCS---EEEEESCGGG-GG-GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEE
T ss_pred cCCEEEEEECCHHHHHHHHHHHHh-cCCCC---eEEEECchhh-CC-CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEE
Confidence 358999999999999999999998 48867 9999999976 34 57899999988765 3567889999999999
Q ss_pred EEEec
Q psy14971 90 VFHKG 94 (156)
Q Consensus 90 v~~~~ 94 (156)
++...
T Consensus 219 vv~~~ 223 (298)
T 3fpf_A 219 IYRTY 223 (298)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99764
No 13
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.30 E-value=2.5e-12 Score=98.58 Aligned_cols=90 Identities=9% Similarity=0.139 Sum_probs=73.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCC--CCCcCEEEEccCCCchH-
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAE--EGPYDIIHLGAACIEVP- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~--~~~fD~I~i~~~~~~i~- 76 (156)
|+.++ +|..++++++|+++|+++++++.|+++++. .|+. ++ ++++.||+.+.++. .++||+||+++.....+
T Consensus 68 G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~~~~~--i~~~~gda~~~l~~~~~~~fD~V~~d~~~~~~~~ 144 (221)
T 3dr5_A 68 GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFRE-AGYSPSR--VRFLLSRPLDVMSRLANDSYQLVFGQVSPMDLKA 144 (221)
T ss_dssp HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHH-TTCCGGG--EEEECSCHHHHGGGSCTTCEEEEEECCCTTTHHH
T ss_pred hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCcCc--EEEEEcCHHHHHHHhcCCCcCeEEEcCcHHHHHH
Confidence 66665 566677789999999999999999999998 4876 23 99999998764433 47899999999887765
Q ss_pred --HHHHhhCCCCcEEEEEec
Q psy14971 77 --KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~ 94 (156)
+.+.+.|||||+|++...
T Consensus 145 ~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 145 LVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HHHHHHHHEEEEEEEEETTT
T ss_pred HHHHHHHHcCCCcEEEEeCC
Confidence 456899999999999543
No 14
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.28 E-value=4.1e-11 Score=91.32 Aligned_cols=89 Identities=10% Similarity=-0.031 Sum_probs=67.5
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC--CCccceEEEEccCCCC--------------CC------
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ--NRKSFKNVSVKDGSKG--------------HA------ 58 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~--~n~~~v~~~~gD~~~~--------------~~------ 58 (156)
+|+-|+..... ++++|+++|.++++.+.|+++++++ |+ .++ |+++.||+.+. ++
T Consensus 39 tGySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~-g~~~~~~--I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i 114 (202)
T 3cvo_A 39 SGGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAAN-PPAEGTE--VNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAV 114 (202)
T ss_dssp CSHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHS-CCCTTCE--EEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGG
T ss_pred chHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCCc--eEEEEeCchhhhcccccccchhhhhHHHHhhhh
Confidence 37766543333 2699999999999999999999994 85 333 99999997654 11
Q ss_pred ----CCCCcCEEEEccCCCc-hHHHHHhhCCCCcEEEEEe
Q psy14971 59 ----EEGPYDIIHLGAACIE-VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 59 ----~~~~fD~I~i~~~~~~-i~~~l~~~L~pGGrLv~~~ 93 (156)
..++||+||+++.... ......++|+|||+|++..
T Consensus 115 ~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 115 WRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEETT
T ss_pred hccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEEeC
Confidence 2378999999998652 2234569999999998864
No 15
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.25 E-value=1.3e-11 Score=95.42 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=74.5
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC----chH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI----EVP 76 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~----~i~ 76 (156)
.|++++.+...++.++|+++|+++.+++.|++|++.+ |+.++ |+++.+|+.+.++...+||.|++.++-. .+-
T Consensus 26 sG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~-gl~~~--i~~~~~d~l~~l~~~~~~D~IviaG~Gg~~i~~Il 102 (225)
T 3kr9_A 26 HAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH-GLKEK--IQVRLANGLAAFEETDQVSVITIAGMGGRLIARIL 102 (225)
T ss_dssp TTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT-TCTTT--EEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHH
T ss_pred cHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CCCce--EEEEECchhhhcccCcCCCEEEEcCCChHHHHHHH
Confidence 4899998878888889999999999999999999995 88654 9999999987766544799999866533 334
Q ss_pred HHHHhhCCCCcEEEEEec
Q psy14971 77 KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~~ 94 (156)
+...+.|+++|+||+.-.
T Consensus 103 ~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 103 EEGLGKLANVERLILQPN 120 (225)
T ss_dssp HHTGGGCTTCCEEEEEES
T ss_pred HHHHHHhCCCCEEEEECC
Confidence 566789999999999543
No 16
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.23 E-value=2.1e-11 Score=93.53 Aligned_cols=88 Identities=13% Similarity=0.115 Sum_probs=72.2
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCC-C-CCCcCEEEEccCCCchH-
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHA-E-EGPYDIIHLGAACIEVP- 76 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~-~-~~~fD~I~i~~~~~~i~- 76 (156)
.|+.++......+.++|+++|+++++++.|+++++. .++. + ++++.+|+.+.++ . .++||+|++++....++
T Consensus 82 ~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~~~~ 157 (232)
T 3ntv_A 82 IGYSSMQFASISDDIHVTTIERNETMIQYAKQNLAT-YHFENQ---VRIIEGNALEQFENVNDKVYDMIFIDAAKAQSKK 157 (232)
T ss_dssp SSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHH-TTCTTT---EEEEESCGGGCHHHHTTSCEEEEEEETTSSSHHH
T ss_pred hhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCc---EEEEECCHHHHHHhhccCCccEEEEcCcHHHHHH
Confidence 377776544455679999999999999999999998 4875 6 9999999977554 2 47899999999887766
Q ss_pred --HHHHhhCCCCcEEEEE
Q psy14971 77 --KEILAQLKPGGRLVFH 92 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~ 92 (156)
+.+.+.|+|||+|++.
T Consensus 158 ~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 158 FFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp HHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEe
Confidence 4567899999999994
No 17
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.22 E-value=2.5e-11 Score=92.10 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=71.2
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC------CCCcCEEEEccCCC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE------EGPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~------~~~fD~I~i~~~~~ 73 (156)
.|.+++ +|+.+++.++|+++|+++++++.|++|++.. ++.++ ++++.+|+.+.++. .++||+||+++...
T Consensus 69 ~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~--v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~ 145 (221)
T 3u81_A 69 CGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA-GLQDK--VTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKD 145 (221)
T ss_dssp TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-TCGGG--EEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGG
T ss_pred CCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc-CCCCc--eEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcc
Confidence 367776 4555666799999999999999999999984 87543 99999998543322 15899999999887
Q ss_pred chHHH--HH---hhCCCCcEEEEEecc
Q psy14971 74 EVPKE--IL---AQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ~i~~~--l~---~~L~pGGrLv~~~~~ 95 (156)
.+++. +. +.|||||+|++....
T Consensus 146 ~~~~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 146 RYLPDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp GHHHHHHHHHHTTCCCTTCEEEESCCC
T ss_pred cchHHHHHHHhccccCCCeEEEEeCCC
Confidence 76631 22 789999999997543
No 18
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.21 E-value=2.8e-11 Score=93.91 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=74.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc----hH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE----VP 76 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~----i~ 76 (156)
.|++++.+...++.++|+|+|+++.+++.|++|++.+ |+.++ |+++.||+.+...+..+||.|++.+.-.. +-
T Consensus 32 sG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~-gl~~~--I~~~~gD~l~~~~~~~~~D~IviaGmGg~lI~~IL 108 (230)
T 3lec_A 32 HAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH-GLTSK--IDVRLANGLSAFEEADNIDTITICGMGGRLIADIL 108 (230)
T ss_dssp TTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT-TCTTT--EEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CCCCc--EEEEECchhhccccccccCEEEEeCCchHHHHHHH
Confidence 4899998877788889999999999999999999995 88654 99999999887765457999987665433 34
Q ss_pred HHHHhhCCCCcEEEEEe
Q psy14971 77 KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~ 93 (156)
+.+.+.|+++|+||+.-
T Consensus 109 ~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 109 NNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp HHTGGGGTTCCEEEEEE
T ss_pred HHHHHHhCcCCEEEEEC
Confidence 55678899999999853
No 19
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.21 E-value=4.1e-11 Score=92.90 Aligned_cols=91 Identities=14% Similarity=0.136 Sum_probs=71.7
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC---CCCCcCEEEEccCCCchH
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA---EEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~---~~~~fD~I~i~~~~~~i~ 76 (156)
.|+.++ ++..+++.++|+++|+++++++.|++++++ .|+.++ ++++.+|+.+.++ ..++||+|++++.....+
T Consensus 74 ~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~g~~~~--v~~~~~d~~~~l~~~~~~~~fD~V~~d~~~~~~~ 150 (248)
T 3tfw_A 74 GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQL-AGVDQR--VTLREGPALQSLESLGECPAFDLIFIDADKPNNP 150 (248)
T ss_dssp TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHH-TTCTTT--EEEEESCHHHHHHTCCSCCCCSEEEECSCGGGHH
T ss_pred chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCc--EEEEEcCHHHHHHhcCCCCCeEEEEECCchHHHH
Confidence 366665 566666579999999999999999999998 487633 9999999865322 235899999999877665
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
+.+.+.|||||+|++...
T Consensus 151 ~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 151 HYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp HHHHHHHHTCCTTCEEEEECC
T ss_pred HHHHHHHHhcCCCeEEEEeCC
Confidence 456789999999998654
No 20
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.20 E-value=2.7e-11 Score=91.59 Aligned_cols=91 Identities=16% Similarity=0.135 Sum_probs=71.6
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-----CCCcCEEEEccCCCc
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-----EGPYDIIHLGAACIE 74 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-----~~~fD~I~i~~~~~~ 74 (156)
.|..++ ++..++++++|+++|+++++++.|+++++. .++.++ ++++.+|+.+.++. .++||+||+++..+.
T Consensus 69 ~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~~~ 145 (223)
T 3duw_A 69 GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIER-ANLNDR--VEVRTGLALDSLQQIENEKYEPFDFIFIDADKQN 145 (223)
T ss_dssp TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHH-TTCTTT--EEEEESCHHHHHHHHHHTTCCCCSEEEECSCGGG
T ss_pred ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCc--EEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCcHH
Confidence 366665 566665578999999999999999999998 487554 99999998653332 157999999998776
Q ss_pred hH---HHHHhhCCCCcEEEEEec
Q psy14971 75 VP---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 i~---~~l~~~L~pGGrLv~~~~ 94 (156)
.+ +.+.+.|+|||+|++...
T Consensus 146 ~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 146 NPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESC
T ss_pred HHHHHHHHHHhcCCCcEEEEeCC
Confidence 55 456789999999998643
No 21
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.19 E-value=2.7e-11 Score=94.23 Aligned_cols=89 Identities=17% Similarity=0.118 Sum_probs=71.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-------CCCcCEEEEccCCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-------EGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-------~~~fD~I~i~~~~~ 73 (156)
|+.++ ++..+.++++|+++|+++++++.|+++++. .|+.++ ++++.+|+.+.++. .++||+||+++...
T Consensus 91 G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~-~g~~~~--i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~ 167 (247)
T 1sui_A 91 GYSLLATALAIPEDGKILAMDINKENYELGLPVIKK-AGVDHK--IDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKD 167 (247)
T ss_dssp GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH-TTCGGG--EEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCST
T ss_pred CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCC--eEEEECCHHHHHHHHHhccCCCCCEEEEEEcCchH
Confidence 67775 566666679999999999999999999998 487433 99999998653331 36899999999877
Q ss_pred chH---HHHHhhCCCCcEEEEEe
Q psy14971 74 EVP---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 74 ~i~---~~l~~~L~pGGrLv~~~ 93 (156)
..+ +.+.+.|+|||+|++..
T Consensus 168 ~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 168 NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp THHHHHHHHHHHBCTTCCEEEEC
T ss_pred HHHHHHHHHHHhCCCCeEEEEec
Confidence 655 46788999999999864
No 22
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.16 E-value=5.5e-11 Score=92.66 Aligned_cols=91 Identities=14% Similarity=0.064 Sum_probs=72.7
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC---CCCcCEEEEccCCC--ch
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE---EGPYDIIHLGAACI--EV 75 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~---~~~fD~I~i~~~~~--~i 75 (156)
.|++++......+.++|+++|+++++++.|++|++. +++.| ++++++|+.+.... .++||.|++.+... .+
T Consensus 91 ~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~l~~---v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~~~~~l 166 (249)
T 3g89_A 91 AGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEV-LGLKG---ARALWGRAEVLAREAGHREAYARAVARAVAPLCVL 166 (249)
T ss_dssp TTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HTCSS---EEEEECCHHHHTTSTTTTTCEEEEEEESSCCHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-hCCCc---eEEEECcHHHhhcccccCCCceEEEECCcCCHHHH
Confidence 477887655556779999999999999999999999 59888 99999998653321 36899999976442 34
Q ss_pred HHHHHhhCCCCcEEEEEecc
Q psy14971 76 PKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~~~~ 95 (156)
.+.+.+.|||||++++..+.
T Consensus 167 l~~~~~~LkpgG~l~~~~g~ 186 (249)
T 3g89_A 167 SELLLPFLEVGGAAVAMKGP 186 (249)
T ss_dssp HHHHGGGEEEEEEEEEEECS
T ss_pred HHHHHHHcCCCeEEEEEeCC
Confidence 45677899999999998763
No 23
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.16 E-value=5.3e-10 Score=84.25 Aligned_cols=90 Identities=14% Similarity=0.041 Sum_probs=71.2
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCC-----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACI----- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~----- 73 (156)
.|.+++......|..+|+++|+++++++.|++|++.. +++| ++++.+|+.+.. ...++||.|+++.+.+
T Consensus 52 ~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~-~~~~---v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~ 127 (214)
T 1yzh_A 52 KGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV-GVPN---IKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKR 127 (214)
T ss_dssp TSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-CCSS---EEEEECCSSCGGGTSCTTCCSEEEEESCCCCCSGG
T ss_pred cCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc-CCCC---EEEEeCCHHHHHhhcCCCCCCEEEEECCCCccccc
Confidence 3677765444456789999999999999999999984 8878 999999997632 2346799999997754
Q ss_pred ---------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 ---------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ---------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+...+.+.|+|||++++...
T Consensus 128 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 128 HEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp GGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred hhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 234567889999999999764
No 24
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.16 E-value=2.6e-11 Score=93.53 Aligned_cols=91 Identities=13% Similarity=0.091 Sum_probs=72.4
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-------CCCcCEEEEccCC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-------EGPYDIIHLGAAC 72 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-------~~~fD~I~i~~~~ 72 (156)
.|+.++ ++..+++.++|+++|+++++++.|++++++ .|+.++ ++++.+|+.+..+. .++||.||+++..
T Consensus 81 ~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~--i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~ 157 (237)
T 3c3y_A 81 TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK-AGVEHK--INFIESDAMLALDNLLQGQESEGSYDFGFVDADK 157 (237)
T ss_dssp TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-TTCGGG--EEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCG
T ss_pred CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCc--EEEEEcCHHHHHHHHHhccCCCCCcCEEEECCch
Confidence 367775 566666679999999999999999999998 487544 99999998653221 3689999999887
Q ss_pred CchH---HHHHhhCCCCcEEEEEec
Q psy14971 73 IEVP---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 73 ~~i~---~~l~~~L~pGGrLv~~~~ 94 (156)
...+ +.+.+.|+|||+|++...
T Consensus 158 ~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 158 PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 6655 456789999999999653
No 25
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.15 E-value=5.1e-12 Score=98.01 Aligned_cols=91 Identities=13% Similarity=0.088 Sum_probs=73.3
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC------CCCcCEEEEccCCC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE------EGPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~------~~~fD~I~i~~~~~ 73 (156)
.|+.++ +|..++++++|+++|+++++++.|+++++. .|+.++ |+++.||+.+.++. .++||+||+++...
T Consensus 71 ~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~--i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~ 147 (242)
T 3r3h_A 71 TGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWRE-AKQEHK--IKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKT 147 (242)
T ss_dssp CSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHH-TTCTTT--EEEEESCHHHHHHHHHHHHCSSCEEEEEEESCGG
T ss_pred cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCc--EEEEEcCHHHHHHHHhhccCCCCEeEEEEcCChH
Confidence 377775 566676689999999999999999999998 487533 99999998764432 37899999999876
Q ss_pred chH---HHHHhhCCCCcEEEEEec
Q psy14971 74 EVP---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ~i~---~~l~~~L~pGGrLv~~~~ 94 (156)
..+ +.+.+.|+|||+|++...
T Consensus 148 ~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 148 NYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HhHHHHHHHHHhcCCCeEEEEECC
Confidence 655 466889999999999643
No 26
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.15 E-value=6.9e-11 Score=92.45 Aligned_cols=90 Identities=11% Similarity=0.029 Sum_probs=73.5
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC----chH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI----EVP 76 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~----~i~ 76 (156)
.|++++.+...++.++|+++|+++.+++.|++|++.+ |+.++ |+++.+|+.+.+.+..+||.|++.+.-. .+-
T Consensus 32 sG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~-gl~~~--I~v~~gD~l~~~~~~~~~D~IviagmGg~lI~~IL 108 (244)
T 3gnl_A 32 HAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS-GLTEQ--IDVRKGNGLAVIEKKDAIDTIVIAGMGGTLIRTIL 108 (244)
T ss_dssp TTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT-TCTTT--EEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHH
T ss_pred cHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CCCce--EEEEecchhhccCccccccEEEEeCCchHHHHHHH
Confidence 4899988777788789999999999999999999995 88655 9999999988766544699998765433 334
Q ss_pred HHHHhhCCCCcEEEEEe
Q psy14971 77 KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~ 93 (156)
+...+.|+++|+||+.-
T Consensus 109 ~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 109 EEGAAKLAGVTKLILQP 125 (244)
T ss_dssp HHTGGGGTTCCEEEEEE
T ss_pred HHHHHHhCCCCEEEEEc
Confidence 56678899999999853
No 27
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.13 E-value=1.1e-10 Score=93.81 Aligned_cols=90 Identities=17% Similarity=0.164 Sum_probs=71.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc------
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------ 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------ 74 (156)
|..++ +++.+++.++|+++|+++.+++.+++|+++ .|+.| ++++.+|+.+.....++||+|+++++|+.
T Consensus 130 G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~-~g~~~---v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~ 205 (315)
T 1ixk_A 130 GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR-LGVLN---VILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHK 205 (315)
T ss_dssp SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-HTCCS---EEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC-
T ss_pred CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH-hCCCe---EEEEECChhhcccccccCCEEEEeCCCCCcccccC
Confidence 55554 566777779999999999999999999999 49888 99999998763333467999999887532
Q ss_pred ----------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 ----------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 ----------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+.+.+.+.|||||+|++...+
T Consensus 206 ~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 206 NPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 123467899999999997653
No 28
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.13 E-value=2.2e-10 Score=89.03 Aligned_cols=86 Identities=14% Similarity=0.025 Sum_probs=69.3
Q ss_pred chHH-HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--C-CCCCcCEEEEccCCCchH-
Q psy14971 2 GDLN-VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--A-EEGPYDIIHLGAACIEVP- 76 (156)
Q Consensus 2 G~la-~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~-~~~~fD~I~i~~~~~~i~- 76 (156)
|+++ .+|.++|++|+|+|+|++++|++.+++++++ . .| +..+.+|+.... + ....+|+||++.+.+.-+
T Consensus 89 G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-~--~n---i~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~~~ 162 (233)
T 4df3_A 89 GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-R--RN---IFPILGDARFPEKYRHLVEGVDGLYADVAQPEQAA 162 (233)
T ss_dssp SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-C--TT---EEEEESCTTCGGGGTTTCCCEEEEEECCCCTTHHH
T ss_pred CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-h--cC---eeEEEEeccCccccccccceEEEEEEeccCChhHH
Confidence 6666 4788999999999999999999999999876 2 57 999999986532 1 236799999988877644
Q ss_pred ---HHHHhhCCCCcEEEEEe
Q psy14971 77 ---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~ 93 (156)
.++.+.|||||++++.+
T Consensus 163 ~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 163 IVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCCEEEEEE
Confidence 34568899999999865
No 29
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.12 E-value=2.4e-10 Score=83.83 Aligned_cols=87 Identities=14% Similarity=0.090 Sum_probs=64.3
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--CCCCCCcCEEEEcc-CCCc---
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--HAEEGPYDIIHLGA-ACIE--- 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--~~~~~~fD~I~i~~-~~~~--- 74 (156)
.|.++...... .++|+++|+++++++.|+++++.. +++| ++++.+|.... +. ..+||.|+++. ..+.
T Consensus 33 ~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~-~~~~---v~~~~~~~~~l~~~~-~~~fD~v~~~~~~~~~~~~ 105 (185)
T 3mti_A 33 NGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDL-GIEN---TELILDGHENLDHYV-REPIRAAIFNLGYLPSADK 105 (185)
T ss_dssp TSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHH-TCCC---EEEEESCGGGGGGTC-CSCEEEEEEEEC-------
T ss_pred CCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc-CCCc---EEEEeCcHHHHHhhc-cCCcCEEEEeCCCCCCcch
Confidence 36677543333 589999999999999999999984 8878 99999766442 22 46899999883 2222
Q ss_pred ----hH-------HHHHhhCCCCcEEEEEec
Q psy14971 75 ----VP-------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 ----i~-------~~l~~~L~pGGrLv~~~~ 94 (156)
.+ ..+.+.|||||++++...
T Consensus 106 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 106 SVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp ----CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 23 456789999999999764
No 30
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.11 E-value=5e-11 Score=90.10 Aligned_cols=91 Identities=15% Similarity=0.113 Sum_probs=71.2
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-C-----CCcCEEEEccCCC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-E-----GPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~-----~~fD~I~i~~~~~ 73 (156)
.|+.++ ++..+++.++|+++|+++++++.|+++++. .++.++ ++++.+|+.+..+. . ++||+|++++...
T Consensus 75 ~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~~~ 151 (225)
T 3tr6_A 75 TGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEK-AGLSDK--IGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKA 151 (225)
T ss_dssp TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHH-TTCTTT--EEEEESCHHHHHHHHHTTTCTTCEEEEEECSCGG
T ss_pred chHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCCCc--eEEEeCCHHHHHHHhhhccCCCCccEEEECCCHH
Confidence 366665 455565579999999999999999999998 487644 99999998653322 1 6899999999866
Q ss_pred chH---HHHHhhCCCCcEEEEEec
Q psy14971 74 EVP---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ~i~---~~l~~~L~pGGrLv~~~~ 94 (156)
..+ +.+.+.|+|||+|++...
T Consensus 152 ~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 152 NTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 554 466789999999998643
No 31
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.10 E-value=1.7e-10 Score=98.02 Aligned_cols=90 Identities=20% Similarity=0.209 Sum_probs=71.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCc-----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIE----- 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~----- 74 (156)
|..++ +|+++++.++|+++|+++.+++.+++|+++ .|+.| ++++.+|+.+... ..+.||+|+++++|+.
T Consensus 129 G~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r-~g~~n---v~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~ 204 (479)
T 2frx_A 129 GSKTTQISARMNNEGAILANEFSASRVKVLHANISR-CGISN---VALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVR 204 (479)
T ss_dssp SHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHH-HTCCS---EEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGG
T ss_pred CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCc---EEEEeCCHHHhhhhccccCCEEEECCCcCCccccc
Confidence 55554 677777779999999999999999999999 59888 9999999876322 2467999999987742
Q ss_pred -----------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 -----------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 -----------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+.....+.|||||+||+..++
T Consensus 205 ~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 205 KDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp TCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 112346889999999997663
No 32
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.10 E-value=1.7e-10 Score=85.48 Aligned_cols=89 Identities=11% Similarity=0.124 Sum_probs=69.5
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCC-CCCCCcCEEEEccCC-C---
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGH-AEEGPYDIIHLGAAC-I--- 73 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~-~~~~~fD~I~i~~~~-~--- 73 (156)
.|.++. ++...++.++|+++|+++++++.|+++++. .++ ++ ++++.+|+.+.. ....+||.|+++.+. +
T Consensus 33 ~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~ 108 (197)
T 3eey_A 33 NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD-LNLIDR---VTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGD 108 (197)
T ss_dssp TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHH-TTCGGG---EEEECSCGGGGGGTCCSCEEEEEEEESBCTTSC
T ss_pred CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCC---eEEEECCHHHHhhhccCCceEEEEcCCcccCcc
Confidence 366665 566677778999999999999999999998 477 56 999999976532 223689999998754 1
Q ss_pred -----------chHHHHHhhCCCCcEEEEEe
Q psy14971 74 -----------EVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 74 -----------~i~~~l~~~L~pGGrLv~~~ 93 (156)
.+...+.+.|||||++++..
T Consensus 109 ~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 109 HSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp TTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 23346788999999999875
No 33
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.10 E-value=3.8e-10 Score=88.58 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=68.4
Q ss_pred chHHH-HHHhcC-CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNV-IVGIKG-ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~-la~l~g-~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++. +++... ++.+|+|+|++++|++.|+++++. .+...+ |+++++|+.+. + ..+||.|++....+.++
T Consensus 82 G~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~-~~~~~~--v~~~~~D~~~~-~-~~~~d~v~~~~~l~~~~~~~ 156 (261)
T 4gek_A 82 GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA-YKAPTP--VDVIEGDIRDI-A-IENASMVVLNFTLQFLEPSE 156 (261)
T ss_dssp THHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHT-SCCSSC--EEEEESCTTTC-C-CCSEEEEEEESCGGGSCHHH
T ss_pred CHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHh-hccCce--EEEeecccccc-c-ccccccceeeeeeeecCchh
Confidence 55664 455554 456999999999999999999987 465432 99999998763 3 35699999998887664
Q ss_pred -----HHHHhhCCCCcEEEEEec
Q psy14971 77 -----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 157 ~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 157 RQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhHHHHHHHHHcCCCcEEEEEec
Confidence 246789999999998643
No 34
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.09 E-value=4.2e-10 Score=83.14 Aligned_cols=90 Identities=12% Similarity=0.035 Sum_probs=68.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCch---
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEV--- 75 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i--- 75 (156)
.|.+++.+... +..+|+++|+++++++.|++|++.+ ++++ ++++++|+.+... ...+||.|+++.+....
T Consensus 55 ~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~---v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~ 129 (189)
T 3p9n_A 55 SGALGLEALSR-GAASVLFVESDQRSAAVIARNIEAL-GLSG---ATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSAD 129 (189)
T ss_dssp TCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHH-TCSC---EEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHH
T ss_pred cCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHc-CCCc---eEEEEccHHHHHhhccCCCccEEEECCCCCcchhh
Confidence 36777643333 3468999999999999999999984 8777 9999999865322 24689999999876652
Q ss_pred -H---HHHHh--hCCCCcEEEEEecc
Q psy14971 76 -P---KEILA--QLKPGGRLVFHKGL 95 (156)
Q Consensus 76 -~---~~l~~--~L~pGGrLv~~~~~ 95 (156)
. ..+.+ .|+|||++++....
T Consensus 130 ~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 130 VDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHHHHHHhcCccCCCeEEEEEecC
Confidence 1 34556 89999999997653
No 35
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.09 E-value=6.6e-11 Score=90.78 Aligned_cols=90 Identities=19% Similarity=0.151 Sum_probs=71.7
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC----------------C-CC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE----------------E-GP 62 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~----------------~-~~ 62 (156)
.|+++. ++...++.++|+++|+++++++.|+++++. .|+.++ ++++.+|+.+.++. . ++
T Consensus 71 ~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~~~~--v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~ 147 (239)
T 2hnk_A 71 TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKE-NGLENK--IFLKLGSALETLQVLIDSKSAPSWASDFAFGPSS 147 (239)
T ss_dssp TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-TTCGGG--EEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTC
T ss_pred CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCC--EEEEECCHHHHHHHHHhhcccccccccccCCCCC
Confidence 366665 466666578999999999999999999988 477544 99999997653221 2 68
Q ss_pred cCEEEEccCCCchH---HHHHhhCCCCcEEEEEe
Q psy14971 63 YDIIHLGAACIEVP---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 63 fD~I~i~~~~~~i~---~~l~~~L~pGGrLv~~~ 93 (156)
||+|++++....++ +.+.+.|+|||+|++..
T Consensus 148 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 148 IDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 99999998877666 56789999999999975
No 36
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.09 E-value=5.2e-10 Score=88.20 Aligned_cols=90 Identities=20% Similarity=0.211 Sum_probs=72.2
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC--chHHH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI--EVPKE 78 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~--~i~~~ 78 (156)
.|.+++.+...+.. +|+++|+++++++.|++|++.+ ++.++ ++++++|+.+... ...||+|+++.+.. .+.+.
T Consensus 136 ~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n-~~~~~--v~~~~~D~~~~~~-~~~fD~Vi~~~p~~~~~~l~~ 210 (278)
T 2frn_A 136 IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN-KVEDR--MSAYNMDNRDFPG-ENIADRILMGYVVRTHEFIPK 210 (278)
T ss_dssp TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT-TCTTT--EEEECSCTTTCCC-CSCEEEEEECCCSSGGGGHHH
T ss_pred CCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc-CCCce--EEEEECCHHHhcc-cCCccEEEECCchhHHHHHHH
Confidence 36777765555543 8999999999999999999985 77654 9999999987555 57899999987654 34567
Q ss_pred HHhhCCCCcEEEEEecc
Q psy14971 79 ILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~~ 95 (156)
+.+.|+|||+|++....
T Consensus 211 ~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 211 ALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp HHHHEEEEEEEEEEEEE
T ss_pred HHHHCCCCeEEEEEEee
Confidence 88999999999996653
No 37
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.09 E-value=4.8e-10 Score=87.42 Aligned_cols=90 Identities=18% Similarity=0.185 Sum_probs=73.3
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc-C--CCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-chH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNI-K--QNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-EVP 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~-g--~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-~i~ 76 (156)
|.++. ++..+++.++|+++|+++++++.|++|++. . | .+| ++++.+|+.+.....++||+|+++...+ .+.
T Consensus 111 G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~g~~~~~---v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l 186 (280)
T 1i9g_A 111 GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSG-CYGQPPDN---WRLVVSDLADSELPDGSVDRAVLDMLAPWEVL 186 (280)
T ss_dssp SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-HHTSCCTT---EEEECSCGGGCCCCTTCEEEEEEESSCGGGGH
T ss_pred cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-hcCCCCCc---EEEEECchHhcCCCCCceeEEEECCcCHHHHH
Confidence 66665 566678889999999999999999999987 5 5 467 9999999876533356899999987654 566
Q ss_pred HHHHhhCCCCcEEEEEecc
Q psy14971 77 KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~~~ 95 (156)
+.+.+.|+|||+|++....
T Consensus 187 ~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 187 DAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp HHHHHHEEEEEEEEEEESS
T ss_pred HHHHHhCCCCCEEEEEeCC
Confidence 7889999999999998754
No 38
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.08 E-value=9.4e-10 Score=90.17 Aligned_cols=91 Identities=10% Similarity=-0.049 Sum_probs=71.3
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC--CCCcCEEEEccCCCc----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE--EGPYDIIHLGAACIE---- 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~--~~~fD~I~i~~~~~~---- 74 (156)
.|.+++.+...++.++|+++|+++++++.|++|++.+ |+.| ++++.+|+.+.++. .+.||+|+++.+...
T Consensus 182 ~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~-g~~~---v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~~~ 257 (373)
T 2qm3_A 182 DDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI-GYED---IEIFTFDLRKPLPDYALHKFDTFITDPPETLEAIR 257 (373)
T ss_dssp TTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH-TCCC---EEEECCCTTSCCCTTTSSCBSEEEECCCSSHHHHH
T ss_pred CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CCCC---EEEEEChhhhhchhhccCCccEEEECCCCchHHHH
Confidence 3777776666677789999999999999999999984 8777 99999999875543 357999999976542
Q ss_pred -hHHHHHhhCCCCcEE-EEEecc
Q psy14971 75 -VPKEILAQLKPGGRL-VFHKGL 95 (156)
Q Consensus 75 -i~~~l~~~L~pGGrL-v~~~~~ 95 (156)
+-..+.+.|+|||++ ++.+..
T Consensus 258 ~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 258 AFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp HHHHHHHHTBCSTTCEEEEEECT
T ss_pred HHHHHHHHHcccCCeEEEEEEec
Confidence 224667899999955 554443
No 39
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.08 E-value=6.3e-10 Score=85.64 Aligned_cols=90 Identities=22% Similarity=0.221 Sum_probs=74.1
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-chHHH
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-EVPKE 78 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-~i~~~ 78 (156)
.|.++. ++..+++.++|+++|+++++++.|++|++.. ++.++ ++++.+|+.+..+ ..+||+|+++.+.+ .+.+.
T Consensus 104 ~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~~~--v~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~l~~ 179 (255)
T 3mb5_A 104 SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA-GFDDR--VTIKLKDIYEGIE-EENVDHVILDLPQPERVVEH 179 (255)
T ss_dssp TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH-TCTTT--EEEECSCGGGCCC-CCSEEEEEECSSCGGGGHHH
T ss_pred chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc-CCCCc--eEEEECchhhccC-CCCcCEEEECCCCHHHHHHH
Confidence 366665 4566688899999999999999999999984 87655 9999999987644 46799999987765 35678
Q ss_pred HHhhCCCCcEEEEEec
Q psy14971 79 ILAQLKPGGRLVFHKG 94 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~ 94 (156)
+.+.|+|||++++...
T Consensus 180 ~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 180 AAKALKPGGFFVAYTP 195 (255)
T ss_dssp HHHHEEEEEEEEEEES
T ss_pred HHHHcCCCCEEEEEEC
Confidence 8999999999999765
No 40
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.08 E-value=2.2e-10 Score=87.95 Aligned_cols=90 Identities=16% Similarity=0.104 Sum_probs=70.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC---CCCcCEEEEccCCCchH-
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE---EGPYDIIHLGAACIEVP- 76 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~---~~~fD~I~i~~~~~~i~- 76 (156)
.|.+++......+.++|+++|+++++++.|+++++. .++.| ++++++|+.+.... .++||+|++.+. ..+.
T Consensus 81 ~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~---v~~~~~d~~~~~~~~~~~~~fD~V~~~~~-~~~~~ 155 (240)
T 1xdz_A 81 AGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEA-LQLEN---TTFCHDRAETFGQRKDVRESYDIVTARAV-ARLSV 155 (240)
T ss_dssp SCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HTCSS---EEEEESCHHHHTTCTTTTTCEEEEEEECC-SCHHH
T ss_pred CCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCC---EEEEeccHHHhcccccccCCccEEEEecc-CCHHH
Confidence 367776554456678999999999999999999998 48888 99999998653211 468999999873 3333
Q ss_pred --HHHHhhCCCCcEEEEEecc
Q psy14971 77 --KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~~ 95 (156)
+.+.+.|+|||++++..+.
T Consensus 156 ~l~~~~~~LkpgG~l~~~~g~ 176 (240)
T 1xdz_A 156 LSELCLPLVKKNGLFVALKAA 176 (240)
T ss_dssp HHHHHGGGEEEEEEEEEEECC
T ss_pred HHHHHHHhcCCCCEEEEEeCC
Confidence 4567899999999997653
No 41
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.07 E-value=1.2e-09 Score=82.13 Aligned_cols=89 Identities=10% Similarity=0.064 Sum_probs=68.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-----CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-----RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-----n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~ 76 (156)
|.++......++..+|+++|+++++++.|++++... ++. + ++++.+|+.......++||+|++......++
T Consensus 41 G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~---v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~ 116 (219)
T 3jwg_A 41 GNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID-RLPEMQRKR---ISLFQSSLVYRDKRFSGYDAATVIEVIEHLD 116 (219)
T ss_dssp CHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG-GSCHHHHTT---EEEEECCSSSCCGGGTTCSEEEEESCGGGCC
T ss_pred CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccccCcc---eEEEeCcccccccccCCCCEEEEHHHHHhCC
Confidence 666655544556689999999999999999999873 553 6 9999999865433457899999998887665
Q ss_pred H--------HHHhhCCCCcEEEEEec
Q psy14971 77 K--------EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ~--------~l~~~L~pGGrLv~~~~ 94 (156)
+ .+.+.|||||+++....
T Consensus 117 ~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 117 ENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp HHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 3 36789999997766543
No 42
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.07 E-value=1.5e-09 Score=81.65 Aligned_cols=89 Identities=10% Similarity=-0.006 Sum_probs=69.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-----CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-----RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-----n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~ 76 (156)
|.++..+...++..+|+++|+++++++.|+++++. .++. + ++++.+|+.......++||+|++......++
T Consensus 41 G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~---v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (217)
T 3jwh_A 41 GNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDR-LRLPRNQWER---LQLIQGALTYQDKRFHGYDAATVIEVIEHLD 116 (217)
T ss_dssp CHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTT-CCCCHHHHTT---EEEEECCTTSCCGGGCSCSEEEEESCGGGCC
T ss_pred CHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHH-hcCCcccCcc---eEEEeCCcccccccCCCcCEEeeHHHHHcCC
Confidence 66666555556668999999999999999999987 3654 6 9999999865433447899999998887654
Q ss_pred --------HHHHhhCCCCcEEEEEec
Q psy14971 77 --------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --------~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 117 ~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 117 LSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp HHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 246789999997777543
No 43
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.07 E-value=7e-10 Score=83.19 Aligned_cols=88 Identities=15% Similarity=0.103 Sum_probs=71.6
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++. ++...++..+|+++|+++++++.|+++++.. ++.+ ++++.+|+.+.....++||+|++......++
T Consensus 49 G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 124 (219)
T 3dh0_A 49 GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL-GLKN---VEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLK 124 (219)
T ss_dssp CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH-TCTT---EEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHH
T ss_pred CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-CCCc---EEEEecccccCCCCCCCeeEEEeehhhhhcCCHHH
Confidence 55554 4556567789999999999999999999884 8778 9999999876433457899999998876553
Q ss_pred --HHHHhhCCCCcEEEEEe
Q psy14971 77 --KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|+|||++++..
T Consensus 125 ~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 125 FLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEE
Confidence 45788999999999975
No 44
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.07 E-value=2e-10 Score=87.59 Aligned_cols=90 Identities=11% Similarity=0.143 Sum_probs=70.3
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC---CCCcCEEEEccCCCchH-
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE---EGPYDIIHLGAACIEVP- 76 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~---~~~fD~I~i~~~~~~i~- 76 (156)
.|.+++......+.++|+++|+++++++.|+++++. .++.++ ++++.+|+.+..+. .++||+|+++...+..+
T Consensus 65 ~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~ 141 (233)
T 2gpy_A 65 IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKA-LGLESR--IELLFGDALQLGEKLELYPLFDVLFIDAAKGQYRR 141 (233)
T ss_dssp TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-TTCTTT--EEEECSCGGGSHHHHTTSCCEEEEEEEGGGSCHHH
T ss_pred CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCc--EEEEECCHHHHHHhcccCCCccEEEECCCHHHHHH
Confidence 366665433333468999999999999999999998 477433 99999998764332 36899999999886554
Q ss_pred --HHHHhhCCCCcEEEEEe
Q psy14971 77 --KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~ 93 (156)
+.+.+.|+|||+|++..
T Consensus 142 ~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 142 FFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp HHHHHGGGEEEEEEEEEET
T ss_pred HHHHHHHHcCCCeEEEEEc
Confidence 56788999999999974
No 45
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.06 E-value=8.4e-11 Score=90.18 Aligned_cols=91 Identities=12% Similarity=0.108 Sum_probs=70.5
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC----C--CCcCEEEEccCCC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE----E--GPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~----~--~~fD~I~i~~~~~ 73 (156)
.|+.++ ++..+++.++|+++|+++++++.|+++++.. |+.++ ++++.+|+.+.++. . ++||+||+++...
T Consensus 83 ~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g~~~~--i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~~ 159 (232)
T 3cbg_A 83 RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA-GVAEK--ISLRLGPALATLEQLTQGKPLPEFDLIFIDADKR 159 (232)
T ss_dssp TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-TCGGG--EEEEESCHHHHHHHHHTSSSCCCEEEEEECSCGG
T ss_pred CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CCCCc--EEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCHH
Confidence 367775 4555655789999999999999999999984 87543 99999997543221 1 6899999998866
Q ss_pred chH---HHHHhhCCCCcEEEEEec
Q psy14971 74 EVP---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ~i~---~~l~~~L~pGGrLv~~~~ 94 (156)
..+ +.+.+.|+|||+|++...
T Consensus 160 ~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 160 NYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEECT
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 554 466889999999999644
No 46
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.06 E-value=6.1e-10 Score=87.63 Aligned_cols=89 Identities=18% Similarity=0.163 Sum_probs=71.6
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCC--CchHHH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAAC--IEVPKE 78 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~--~~i~~~ 78 (156)
.|.+++.+...++.++|+++|+++++++.|++|++.+ +++| ++++.+|+.+. +....||+|+++.+. ..+...
T Consensus 130 ~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n-~l~~---~~~~~~d~~~~-~~~~~~D~Vi~d~p~~~~~~l~~ 204 (272)
T 3a27_A 130 IGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN-KLNN---VIPILADNRDV-ELKDVADRVIMGYVHKTHKFLDK 204 (272)
T ss_dssp TTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT-TCSS---EEEEESCGGGC-CCTTCEEEEEECCCSSGGGGHHH
T ss_pred CCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-CCCC---EEEEECChHHc-CccCCceEEEECCcccHHHHHHH
Confidence 3677765444444579999999999999999999985 8888 99999999875 445679999999875 234467
Q ss_pred HHhhCCCCcEEEEEec
Q psy14971 79 ILAQLKPGGRLVFHKG 94 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~ 94 (156)
+.+.|+|||++++...
T Consensus 205 ~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 205 TFEFLKDRGVIHYHET 220 (272)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHHcCCCCEEEEEEc
Confidence 7889999999998654
No 47
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.06 E-value=7.8e-10 Score=83.78 Aligned_cols=90 Identities=12% Similarity=0.061 Sum_probs=69.8
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCC-----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACI----- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~----- 73 (156)
+|.+++......|...|+|+|+++++++.|+++++. .++.| ++++.+|+.+.. ...+.||.|++..+.+
T Consensus 49 ~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~-~~~~n---v~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~ 124 (213)
T 2fca_A 49 KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKD-SEAQN---VKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKR 124 (213)
T ss_dssp TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-SCCSS---EEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGG
T ss_pred CCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHH-cCCCC---EEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCcc
Confidence 366666444445678999999999999999999998 48888 999999987521 1246799999986543
Q ss_pred ---------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 ---------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ---------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+...+.+.|+|||+|++...
T Consensus 125 ~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 125 HEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp GGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 123567889999999999764
No 48
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.06 E-value=2e-10 Score=87.81 Aligned_cols=90 Identities=11% Similarity=0.017 Sum_probs=71.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CCCCCcCEEEEccCCC----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AEEGPYDIIHLGAACI---- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~~~~fD~I~i~~~~~---- 73 (156)
+|.+++......|...|+|+|+++++++.|+++++. .++.| ++++.+|+.+.+ ...++||.|++..+.+
T Consensus 45 ~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~-~~l~n---v~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~ 120 (218)
T 3dxy_A 45 MGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE-EGLSN---LRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKA 120 (218)
T ss_dssp TCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-TTCSS---EEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSG
T ss_pred ChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH-hCCCc---EEEEECCHHHHHHHHcCCCChheEEEeCCCCccch
Confidence 477776544456778999999999999999999998 48889 999999987642 2357899999985543
Q ss_pred ----------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 ----------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ----------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+.+.+.+.|||||+|++...
T Consensus 121 ~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 121 RHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp GGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred hhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 134567788999999999775
No 49
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.05 E-value=1.2e-09 Score=83.87 Aligned_cols=89 Identities=11% Similarity=0.057 Sum_probs=69.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......++ ++|+++|+++++++.|+++++. .++.++ ++++.+|+.+.....++||+|++.....++.
T Consensus 58 G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~-~~~~~~--~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l 133 (257)
T 3f4k_A 58 GGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVK-ANCADR--VKGITGSMDNLPFQNEELDLIWSEGAIYNIGFERGM 133 (257)
T ss_dssp SHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHH-TTCTTT--EEEEECCTTSCSSCTTCEEEEEEESCSCCCCHHHHH
T ss_pred CHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHH-cCCCCc--eEEEECChhhCCCCCCCEEEEEecChHhhcCHHHHH
Confidence 666654433343 4999999999999999999998 487654 9999999965433457899999998887642
Q ss_pred HHHHhhCCCCcEEEEEec
Q psy14971 77 KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 134 ~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 134 NEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp HHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEEe
Confidence 457789999999999763
No 50
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.05 E-value=7.7e-10 Score=85.97 Aligned_cols=89 Identities=18% Similarity=0.182 Sum_probs=72.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......+|..+|+++|+++.+++.|++++.. .+..| ++++.+|+.+.....++||.|++......++
T Consensus 49 G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 124 (276)
T 3mgg_A 49 GAQTVILAKNNPDAEITSIDISPESLEKARENTEK-NGIKN---VKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEA 124 (276)
T ss_dssp SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-TTCCS---EEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHH
T ss_pred CHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCCCC---cEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHH
Confidence 56665444446678999999999999999999988 48888 9999999876444467899999998876554
Q ss_pred -HHHHhhCCCCcEEEEEec
Q psy14971 77 -KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 125 l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 125 LKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEc
Confidence 357889999999999753
No 51
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.04 E-value=2.1e-10 Score=90.25 Aligned_cols=90 Identities=17% Similarity=0.149 Sum_probs=70.0
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----CCCCcCEEEEccCCCc--
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----EEGPYDIIHLGAACIE-- 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----~~~~fD~I~i~~~~~~-- 74 (156)
|..+. +++++...++|+++|+++.+++.+++|+++ .|+.| ++++.+|+.+... ..++||+|+++++++.
T Consensus 95 G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~-~g~~~---v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g 170 (274)
T 3ajd_A 95 GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR-MGVLN---TIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNI 170 (274)
T ss_dssp CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH-TTCCS---EEEEESCHHHHHHHHHHTTCCEEEEEEEECCC---
T ss_pred cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH-hCCCc---EEEEeCChHhcchhhhhccccCCEEEEcCCCCCCc
Confidence 55554 566665568999999999999999999999 58888 9999999865322 1467999999977642
Q ss_pred ----------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 ----------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 ----------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+.+.+.+.|||||+|++...+
T Consensus 171 ~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 171 IKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp ---------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 223456799999999997764
No 52
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.04 E-value=8.7e-10 Score=88.74 Aligned_cols=91 Identities=15% Similarity=0.130 Sum_probs=70.5
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcC-----------CCCccceEEEEccCCCCCC--CCCCcCEE
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIK-----------QNRKSFKNVSVKDGSKGHA--EEGPYDII 66 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g-----------~~n~~~v~~~~gD~~~~~~--~~~~fD~I 66 (156)
.|.+++ ++..+++.++|+++|+++++++.|++|++. ++ ..| ++++.+|+.+... ..++||+|
T Consensus 116 ~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~ln~~~~~~~~---v~~~~~d~~~~~~~~~~~~fD~V 191 (336)
T 2b25_A 116 SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKH-WRDSWKLSHVEEWPDN---VDFIHKDISGATEDIKSLTFDAV 191 (336)
T ss_dssp TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHH-HHHHHTTTCSSCCCCC---EEEEESCTTCCC-------EEEE
T ss_pred cCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH-hhcccccccccccCCc---eEEEECChHHcccccCCCCeeEE
Confidence 377776 455668889999999999999999999986 23 246 9999999987532 23579999
Q ss_pred EEccCCCc-hHHHHHhhCCCCcEEEEEecc
Q psy14971 67 HLGAACIE-VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 67 ~i~~~~~~-i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+++...+. +.+.+.+.|+|||+|++....
T Consensus 192 ~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 192 ALDMLNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp EECSSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred EECCCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99876653 467889999999999997753
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.04 E-value=1.3e-09 Score=84.43 Aligned_cols=89 Identities=16% Similarity=0.084 Sum_probs=69.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++..+... +.++|+++|+++.+++.|+++++. .++.++ ++++.+|..+.....++||+|++......+.
T Consensus 58 G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~~~~~l 133 (267)
T 3kkz_A 58 GGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQ-SGLQNR--VTGIVGSMDDLPFRNEELDLIWSEGAIYNIGFERGL 133 (267)
T ss_dssp CHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHH-TTCTTT--EEEEECCTTSCCCCTTCEEEEEESSCGGGTCHHHHH
T ss_pred CHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHH-cCCCcC--cEEEEcChhhCCCCCCCEEEEEEcCCceecCHHHHH
Confidence 5666543333 457999999999999999999988 477443 9999999976433457899999998876542
Q ss_pred HHHHhhCCCCcEEEEEec
Q psy14971 77 KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 134 ~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 134 NEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp HHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEEe
Confidence 467889999999999754
No 54
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=1.4e-09 Score=83.40 Aligned_cols=90 Identities=20% Similarity=0.189 Sum_probs=73.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc-CCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-chHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNI-KQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-EVPKE 78 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~-g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-~i~~~ 78 (156)
|.++. ++..+++.++|+++|+++++++.|+++++. . |.++ ++++.+|+.+.....+.||+|+++.... .+.+.
T Consensus 108 G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-~~g~~~---v~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~ 183 (258)
T 2pwy_A 108 GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRA-FWQVEN---VRFHLGKLEEAELEEAAYDGVALDLMEPWKVLEK 183 (258)
T ss_dssp SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-HCCCCC---EEEEESCGGGCCCCTTCEEEEEEESSCGGGGHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-hcCCCC---EEEEECchhhcCCCCCCcCEEEECCcCHHHHHHH
Confidence 56665 456668889999999999999999999987 5 6567 9999999876522336799999987654 56678
Q ss_pred HHhhCCCCcEEEEEecc
Q psy14971 79 ILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~~ 95 (156)
+.+.|+|||++++....
T Consensus 184 ~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 184 AALALKPDRFLVAYLPN 200 (258)
T ss_dssp HHHHEEEEEEEEEEESC
T ss_pred HHHhCCCCCEEEEEeCC
Confidence 89999999999998764
No 55
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.03 E-value=1.7e-10 Score=97.55 Aligned_cols=90 Identities=16% Similarity=0.157 Sum_probs=71.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCch----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIEV---- 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~i---- 75 (156)
|..|+ +|++++..++|+++|+++.+++.+++|+++ +|+.| +.++.+|+.+... ..+.||+|+++++|+..
T Consensus 117 Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r-~g~~n---v~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~r 192 (456)
T 3m4x_A 117 GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER-WGVSN---AIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFR 192 (456)
T ss_dssp CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH-HTCSS---EEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTT
T ss_pred CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCc---eEEEeCCHHHhhhhccccCCEEEECCCCCCccccc
Confidence 55554 677777779999999999999999999999 59988 9999999865321 24689999999987421
Q ss_pred ------------------------HHHHHhhCCCCcEEEEEecc
Q psy14971 76 ------------------------PKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 76 ------------------------~~~l~~~L~pGGrLv~~~~~ 95 (156)
-+...+.|||||+||..+++
T Consensus 193 r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 193 KDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp TCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred cCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 12346789999999997663
No 56
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.03 E-value=1.8e-09 Score=83.78 Aligned_cols=87 Identities=10% Similarity=-0.055 Sum_probs=65.8
Q ss_pred chHH-HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC---CCCCcCEEEEccCCCchHH
Q psy14971 2 GDLN-VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA---EEGPYDIIHLGAACIEVPK 77 (156)
Q Consensus 2 G~la-~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~---~~~~fD~I~i~~~~~~i~~ 77 (156)
|.++ .+|.++++.|+|+|+|+++.+++...+..+. . .| +.++.+|+..... ...+||+|+++.+.+..++
T Consensus 88 G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r--~n---v~~i~~Da~~~~~~~~~~~~~D~I~~d~a~~~~~~ 161 (232)
T 3id6_C 88 GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-R--PN---IFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTD 161 (232)
T ss_dssp SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-C--TT---EEEEECCTTCGGGTTTTCCCEEEEEECCCCTTHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-c--CC---eEEEEcccccchhhhccccceEEEEecCCChhHHH
Confidence 5655 5788899999999999999998666555444 1 57 9999999876421 1358999999998865443
Q ss_pred H----HHhhCCCCcEEEEEec
Q psy14971 78 E----ILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 ~----l~~~L~pGGrLv~~~~ 94 (156)
. +.+.|||||+|++.+.
T Consensus 162 il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 162 IAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCeEEEEEEc
Confidence 2 3448999999999853
No 57
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.02 E-value=1.2e-09 Score=84.26 Aligned_cols=86 Identities=14% Similarity=0.121 Sum_probs=67.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......+ ++|+++|+++++++.|+++++. .+..| ++++.+|+.+.....++||+|++.....+++
T Consensus 49 G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~-~~~~~---v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~ 122 (260)
T 1vl5_A 49 GHVANAFAPFV--KKVVAFDLTEDILKVARAFIEG-NGHQQ---VEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASF 122 (260)
T ss_dssp CHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHH-TTCCS---EEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHH
T ss_pred CHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHh-cCCCc---eEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHH
Confidence 55554433333 5999999999999999999988 48778 9999999876433457899999998886654
Q ss_pred -HHHHhhCCCCcEEEEEe
Q psy14971 77 -KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|||||+|++..
T Consensus 123 l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 123 VSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEE
Confidence 35789999999999964
No 58
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.02 E-value=7.1e-10 Score=83.23 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=66.7
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC--CCccceEEEEccCCCCCCC--CCC-cCEEEEccCCC--
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ--NRKSFKNVSVKDGSKGHAE--EGP-YDIIHLGAACI-- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~--~n~~~v~~~~gD~~~~~~~--~~~-fD~I~i~~~~~-- 73 (156)
.|.+++.+...+. ++|+++|+++++++.|++|++. .++ ++ ++++.+|+.+..+. ..+ ||+|+++.+..
T Consensus 64 tG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~---v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~ 138 (201)
T 2ift_A 64 SGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQT-LKCSSEQ---AEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFN 138 (201)
T ss_dssp TCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHH-TTCCTTT---EEEECSCHHHHTTSCCSSCCEEEEEECCCSSSC
T ss_pred cCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHH-hCCCccc---eEEEECCHHHHHHhhccCCCCCEEEECCCCCCc
Confidence 3667764333332 6999999999999999999998 487 57 99999998653332 467 99999998743
Q ss_pred chH---HHH--HhhCCCCcEEEEEecc
Q psy14971 74 EVP---KEI--LAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ~i~---~~l--~~~L~pGGrLv~~~~~ 95 (156)
..+ ..+ .+.|+|||++++....
T Consensus 139 ~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 139 LAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 222 234 3459999999997764
No 59
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.01 E-value=1.2e-09 Score=82.64 Aligned_cols=86 Identities=16% Similarity=0.225 Sum_probs=65.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC--CCCCCCCcCEEEEccCCC------
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK--GHAEEGPYDIIHLGAACI------ 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~--~~~~~~~fD~I~i~~~~~------ 73 (156)
|.+++.+.... .++|+++|+++++++.|++|++.+ +. + ++++.+|+.. ..+ .++||+|+++.+..
T Consensus 68 G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~-~---v~~~~~d~~~~~~~~-~~~fD~I~~npp~~~~~~~~ 140 (230)
T 3evz_A 68 AMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN-NS-N---VRLVKSNGGIIKGVV-EGTFDVIFSAPPYYDKPLGR 140 (230)
T ss_dssp CHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT-TC-C---CEEEECSSCSSTTTC-CSCEEEEEECCCCC------
T ss_pred HHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh-CC-C---cEEEeCCchhhhhcc-cCceeEEEECCCCcCCcccc
Confidence 66776443332 489999999999999999999984 77 7 9999999642 333 37899999985542
Q ss_pred -------------------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 -------------------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 -------------------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+.+.+.+.|||||++++.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 141 VLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp ---------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 123456788999999999654
No 60
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.01 E-value=1.4e-09 Score=88.36 Aligned_cols=92 Identities=15% Similarity=0.010 Sum_probs=72.4
Q ss_pred CchHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-----
Q psy14971 1 MGDLNVIVGIK-GERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE----- 74 (156)
Q Consensus 1 ~G~la~la~l~-g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~----- 74 (156)
.|.+++.+... ++..+|+++|+++++++.|++|++.+ |+++ ++++.+|+.+.......||+|+++.+...
T Consensus 214 sG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~-g~~~---i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~ 289 (354)
T 3tma_A 214 SGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS-GLSW---IRFLRADARHLPRFFPEVDRILANPPHGLRLGRK 289 (354)
T ss_dssp TSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT-TCTT---CEEEECCGGGGGGTCCCCSEEEECCCSCC----C
T ss_pred cCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc-CCCc---eEEEeCChhhCccccCCCCEEEECCCCcCccCCc
Confidence 36677655554 47799999999999999999999994 8877 99999999875444567999999876431
Q ss_pred ---------hHHHHHhhCCCCcEEEEEeccC
Q psy14971 75 ---------VPKEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 75 ---------i~~~l~~~L~pGGrLv~~~~~~ 96 (156)
+.+.+.+.|+|||++++.....
T Consensus 290 ~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 290 EGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred ccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 2235678999999999987653
No 61
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.01 E-value=3.1e-10 Score=85.18 Aligned_cols=89 Identities=11% Similarity=0.040 Sum_probs=68.6
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCCchH---
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~~i~--- 76 (156)
|+.++ ++..+.+.++|+++|+++++++.|+++++.. ++.++ ++++.+|+.+..+. .+ ||+|++++.....+
T Consensus 68 G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~--v~~~~~d~~~~~~~~~~-fD~v~~~~~~~~~~~~l 143 (210)
T 3c3p_A 68 GCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN-GLIDR--VELQVGDPLGIAAGQRD-IDILFMDCDVFNGADVL 143 (210)
T ss_dssp GHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-SGGGG--EEEEESCHHHHHTTCCS-EEEEEEETTTSCHHHHH
T ss_pred cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-CCCce--EEEEEecHHHHhccCCC-CCEEEEcCChhhhHHHH
Confidence 66665 4555554789999999999999999999884 76443 99999998653222 24 99999998776555
Q ss_pred HHHHhhCCCCcEEEEEec
Q psy14971 77 KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~~ 94 (156)
+.+.+.|+|||+|++...
T Consensus 144 ~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 144 ERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp HHHGGGEEEEEEEEEESS
T ss_pred HHHHHhcCCCeEEEEECc
Confidence 456789999999998543
No 62
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.00 E-value=6e-09 Score=79.45 Aligned_cols=88 Identities=14% Similarity=0.081 Sum_probs=70.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCC-chHHHH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-EVPKEI 79 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-~i~~~l 79 (156)
|.++..+... .++|+++|+++++++.|+++++. .++ ++ ++++.+|..+.......||+|+++.+.+ ...+.+
T Consensus 103 G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~---~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~ 176 (248)
T 2yvl_A 103 GALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKK-FNLGKN---VKFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKV 176 (248)
T ss_dssp SHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHH-TTCCTT---EEEECSCTTTSCCCTTCBSEEEECSSCGGGGHHHH
T ss_pred cHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHH-cCCCCc---EEEEEcChhhcccCCCcccEEEECCcCHHHHHHHH
Confidence 5666543332 48999999999999999999988 477 56 9999999987552346799999987654 566788
Q ss_pred HhhCCCCcEEEEEecc
Q psy14971 80 LAQLKPGGRLVFHKGL 95 (156)
Q Consensus 80 ~~~L~pGGrLv~~~~~ 95 (156)
.+.|+|||++++....
T Consensus 177 ~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 177 HKSLMEGAPVGFLLPT 192 (248)
T ss_dssp HHHBCTTCEEEEEESS
T ss_pred HHHcCCCCEEEEEeCC
Confidence 9999999999998864
No 63
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.00 E-value=2.4e-09 Score=83.92 Aligned_cols=89 Identities=15% Similarity=0.118 Sum_probs=72.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc-CCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-chHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNI-KQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-EVPKE 78 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~-g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-~i~~~ 78 (156)
|.++. +++.+++.++|+++|+++++++.|++|++. . |.+| ++++.+|+.+..+ .++||+|+++.... .+.+.
T Consensus 122 G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~g~~~---v~~~~~d~~~~~~-~~~fD~Vi~~~~~~~~~l~~ 196 (275)
T 1yb2_A 122 GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSE-FYDIGN---VRTSRSDIADFIS-DQMYDAVIADIPDPWNHVQK 196 (275)
T ss_dssp SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHT-TSCCTT---EEEECSCTTTCCC-SCCEEEEEECCSCGGGSHHH
T ss_pred CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh-cCCCCc---EEEEECchhccCc-CCCccEEEEcCcCHHHHHHH
Confidence 56665 455567779999999999999999999987 6 6677 9999999987444 46899999976543 45578
Q ss_pred HHhhCCCCcEEEEEecc
Q psy14971 79 ILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~~ 95 (156)
+.+.|+|||+|++....
T Consensus 197 ~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 197 IASMMKPGSVATFYLPN 213 (275)
T ss_dssp HHHTEEEEEEEEEEESS
T ss_pred HHHHcCCCCEEEEEeCC
Confidence 88999999999998764
No 64
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.00 E-value=1.5e-09 Score=85.02 Aligned_cols=89 Identities=19% Similarity=0.199 Sum_probs=73.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCC-chHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-EVPKE 78 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-~i~~~ 78 (156)
|.+++ ++..+++.++|+++|+++++++.|++|++. .++ ++ ++++.+|+.+..+ .+.||+|+++.+.+ .+.+.
T Consensus 124 G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~-~~~~D~V~~~~~~~~~~l~~ 198 (277)
T 1o54_A 124 GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTK-WGLIER---VTIKVRDISEGFD-EKDVDALFLDVPDPWNYIDK 198 (277)
T ss_dssp SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHH-TTCGGG---EEEECCCGGGCCS-CCSEEEEEECCSCGGGTHHH
T ss_pred CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-cCCCCC---EEEEECCHHHccc-CCccCEEEECCcCHHHHHHH
Confidence 66665 455568889999999999999999999998 476 46 9999999877643 35799999987655 56678
Q ss_pred HHhhCCCCcEEEEEecc
Q psy14971 79 ILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~~ 95 (156)
+.+.|+|||+|++....
T Consensus 199 ~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 199 CWEALKGGGRFATVCPT 215 (277)
T ss_dssp HHHHEEEEEEEEEEESS
T ss_pred HHHHcCCCCEEEEEeCC
Confidence 89999999999998764
No 65
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.99 E-value=2.5e-09 Score=81.98 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=68.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++. ++... +.+|+++|+++++++.|+++++. .|+. | ++++.+|+.+... .++||+|++......++
T Consensus 48 G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~ 120 (256)
T 1nkv_A 48 GEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEE-LGVSER---VHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFA 120 (256)
T ss_dssp CHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHH-TTCTTT---EEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSH
T ss_pred CHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHh-cCCCcc---eEEEECChHhCCc-CCCCCEEEECCChHhcCCHH
Confidence 55664 45555 36999999999999999999988 4774 6 9999999987544 67899999987766542
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 121 ~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 121 GAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp HHHHHHTTSEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEecC
Confidence 467889999999999653
No 66
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.99 E-value=3.3e-10 Score=85.81 Aligned_cols=89 Identities=15% Similarity=0.174 Sum_probs=69.3
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCC---C---CCcCEEEEccCC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAE---E---GPYDIIHLGAAC 72 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~---~---~~fD~I~i~~~~ 72 (156)
.|++++ ++..+++.++|+++|+++++++.|+++++.. |+ ++ ++++.+|+.+..+. . ++||+|++++..
T Consensus 80 ~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-g~~~~---i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~ 155 (229)
T 2avd_A 80 TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA-EAEHK---IDLRLKPALETLDELLAAGEAGTFDVAVVDADK 155 (229)
T ss_dssp TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT-TCTTT---EEEEESCHHHHHHHHHHTTCTTCEEEEEECSCS
T ss_pred ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-CCCCe---EEEEEcCHHHHHHHHHhcCCCCCccEEEECCCH
Confidence 367765 4555555789999999999999999999984 77 45 99999998543221 1 679999999887
Q ss_pred CchH---HHHHhhCCCCcEEEEEe
Q psy14971 73 IEVP---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 73 ~~i~---~~l~~~L~pGGrLv~~~ 93 (156)
.... +.+.+.|+|||++++..
T Consensus 156 ~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 156 ENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEC
Confidence 6443 56788999999999954
No 67
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.99 E-value=1.7e-09 Score=80.44 Aligned_cols=86 Identities=19% Similarity=0.148 Sum_probs=68.1
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++.. +.. +..+|+++|+++++++.|+++++. .+.. + ++++.+|..+.....++||+|++.....+++
T Consensus 55 G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~-~~~~~~---~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~ 128 (219)
T 3dlc_A 55 GALSIALAKQ--SDFSIRALDFSKHMNEIALKNIAD-ANLNDR---IQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVA 128 (219)
T ss_dssp SHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHH-TTCTTT---EEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHH
T ss_pred CHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHh-ccccCc---eEEEEcCHHHCCCCcccccEEEECchHhhccCHH
Confidence 555543 443 457999999999999999999988 4764 5 9999999876433457899999998876543
Q ss_pred ---HHHHhhCCCCcEEEEEe
Q psy14971 77 ---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|+|||++++..
T Consensus 129 ~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 129 TAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEe
Confidence 46788999999999964
No 68
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.98 E-value=2.4e-09 Score=82.70 Aligned_cols=91 Identities=16% Similarity=0.034 Sum_probs=68.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh-----cCCCCccceEEEEccCCCCCC---CCCCcCEEEEccCCC
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN-----IKQNRKSFKNVSVKDGSKGHA---EEGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~-----~g~~n~~~v~~~~gD~~~~~~---~~~~fD~I~i~~~~~ 73 (156)
|.+++......+...|+|+|+++.+++.|+++++.. .+..| ++++.+|+.+.++ ..+.||.|++..+.+
T Consensus 58 G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~n---v~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp 134 (235)
T 3ckk_A 58 GGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQN---IACLRSNAMKHLPNFFYKGQLTKMFFLFPDP 134 (235)
T ss_dssp CHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTT---EEEEECCTTTCHHHHCCTTCEEEEEEESCC-
T ss_pred cHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCe---EEEEECcHHHhhhhhCCCcCeeEEEEeCCCc
Confidence 666654444456789999999999999999987641 15678 9999999976433 357899999987543
Q ss_pred c--------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 74 E--------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ~--------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
. +...+.+.|||||+|++....
T Consensus 135 ~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 135 HFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp ----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 2 345678999999999997653
No 69
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.98 E-value=1.7e-09 Score=90.86 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=70.4
Q ss_pred chHH-HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCc----
Q psy14971 2 GDLN-VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIE---- 74 (156)
Q Consensus 2 G~la-~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~---- 74 (156)
|..+ .++..++..++|+++|+++.+++.+++|+++ .|+.| ++++.+|+.+... ..+.||+|+++++|+.
T Consensus 271 G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~-~g~~~---v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~ 346 (450)
T 2yxl_A 271 GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR-MGIKI---VKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTI 346 (450)
T ss_dssp CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-TTCCS---EEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGT
T ss_pred cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH-cCCCc---EEEEEcChhhcchhhccCCCCEEEEcCCCCCCeee
Confidence 4445 4666666568999999999999999999999 59888 9999999876432 1267999999887742
Q ss_pred ------------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 ------------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 ------------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+...+.+.|||||+|++..++
T Consensus 347 ~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 347 GKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp TTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred ccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 123457889999999987664
No 70
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.98 E-value=3e-09 Score=81.92 Aligned_cols=90 Identities=17% Similarity=0.095 Sum_probs=70.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc--------CCCCccceEEEEccCCCCCC---CCCCcCEEEEc
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNI--------KQNRKSFKNVSVKDGSKGHA---EEGPYDIIHLG 69 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~--------g~~n~~~v~~~~gD~~~~~~---~~~~fD~I~i~ 69 (156)
.|.+++.+...++...|+++|+++.+++.|+++++. . ++.| ++++.+|+.+.++ +.+.+|.|++.
T Consensus 60 ~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~n---v~~~~~D~~~~l~~~~~~~~~d~v~~~ 135 (246)
T 2vdv_E 60 FGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIA-LRNNTASKHGFQN---INVLRGNAMKFLPNFFEKGQLSKMFFC 135 (246)
T ss_dssp TSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHH-HHHTC-CCSTTTT---EEEEECCTTSCGGGTSCTTCEEEEEEE
T ss_pred CCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHH-HhhccccccCCCc---EEEEeccHHHHHHHhccccccCEEEEE
Confidence 367776555556778999999999999999999876 4 6678 9999999976433 34689999987
Q ss_pred cCCC--------------chHHHHHhhCCCCcEEEEEec
Q psy14971 70 AACI--------------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 70 ~~~~--------------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+-+ .+...+.+.|+|||+|++...
T Consensus 136 ~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 136 FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 6544 344567899999999999654
No 71
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.98 E-value=2.2e-09 Score=81.37 Aligned_cols=86 Identities=19% Similarity=0.089 Sum_probs=68.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......+..+|+++|+++++++.|++++.. .+ + ++++.+|+.+.... ++||+|++......++
T Consensus 56 G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~--~---~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~ 128 (234)
T 3dtn_A 56 GLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG-NL--K---VKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKK 128 (234)
T ss_dssp SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-CT--T---EEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHH
T ss_pred CHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc-CC--C---EEEEeCchhccCCC-CCceEEEEeCccccCCHHHHH
Confidence 56665443444678999999999999999999876 34 6 99999999775444 7899999998877654
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 129 ~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 129 ELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEe
Confidence 345789999999999753
No 72
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.97 E-value=2.7e-09 Score=79.37 Aligned_cols=88 Identities=16% Similarity=0.034 Sum_probs=68.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---HH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---KE 78 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---~~ 78 (156)
|.++.......+..+|+++|+++++++.|+++++. .++.| ++++.+|+.+.. ..++||.|++.+. .... ..
T Consensus 77 G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~---v~~~~~d~~~~~-~~~~~D~i~~~~~-~~~~~~l~~ 150 (207)
T 1jsx_A 77 GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHE-LKLEN---IEPVQSRVEEFP-SEPPFDGVISRAF-ASLNDMVSW 150 (207)
T ss_dssp TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-TTCSS---EEEEECCTTTSC-CCSCEEEEECSCS-SSHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCC---eEEEecchhhCC-ccCCcCEEEEecc-CCHHHHHHH
Confidence 66665444444568999999999999999999998 48888 999999987643 3468999997653 3333 45
Q ss_pred HHhhCCCCcEEEEEecc
Q psy14971 79 ILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~~ 95 (156)
+.+.|+|||++++..+.
T Consensus 151 ~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 151 CHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp HTTSEEEEEEEEEEESS
T ss_pred HHHhcCCCcEEEEEeCC
Confidence 67889999999998764
No 73
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.97 E-value=2.5e-09 Score=88.08 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=71.5
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc------
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------ 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------ 74 (156)
.|.+++.+...+|..+|+++|+++.+++.|++|++.+ ++.+...++++.+|+.+..+ .++||.|+++.+.+.
T Consensus 233 ~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n-gl~~~~~v~~~~~D~~~~~~-~~~fD~Ii~nppfh~~~~~~~ 310 (375)
T 4dcm_A 233 NGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN-MPEALDRCEFMINNALSGVE-PFRFNAVLCNPPFHQQHALTD 310 (375)
T ss_dssp TCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGGGEEEEECSTTTTCC-TTCEEEEEECCCC-------C
T ss_pred chHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc-CCCcCceEEEEechhhccCC-CCCeeEEEECCCcccCcccCH
Confidence 4778876666677799999999999999999999985 65411018899999987554 468999999877542
Q ss_pred -----hHHHHHhhCCCCcEEEEEec
Q psy14971 75 -----VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 -----i~~~l~~~L~pGGrLv~~~~ 94 (156)
+...+.+.|||||++++...
T Consensus 311 ~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 311 NVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 23567789999999999764
No 74
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.96 E-value=3.1e-09 Score=84.47 Aligned_cols=87 Identities=22% Similarity=0.224 Sum_probs=69.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC--chHHH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI--EVPKE 78 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~--~i~~~ 78 (156)
.|.+++.+...|. ++|+++|++|+.++.+++|++.+ ++.++ ++++.+|+.+. .....||+|+++.+.. +.-+.
T Consensus 136 ~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N-~v~~~--v~~~~~D~~~~-~~~~~~D~Vi~~~p~~~~~~l~~ 210 (278)
T 3k6r_A 136 IGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLN-KVEDR--MSAYNMDNRDF-PGENIADRILMGYVVRTHEFIPK 210 (278)
T ss_dssp TTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHT-TCTTT--EEEECSCTTTC-CCCSCEEEEEECCCSSGGGGHHH
T ss_pred CcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHc-CCCCc--EEEEeCcHHHh-ccccCCCEEEECCCCcHHHHHHH
Confidence 4778887666553 69999999999999999999996 88665 99999999874 3457899999986553 33356
Q ss_pred HHhhCCCCcEEEEE
Q psy14971 79 ILAQLKPGGRLVFH 92 (156)
Q Consensus 79 l~~~L~pGGrLv~~ 92 (156)
..+.|++||.|.+.
T Consensus 211 a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 211 ALSIAKDGAIIHYH 224 (278)
T ss_dssp HHHHEEEEEEEEEE
T ss_pred HHHHcCCCCEEEEE
Confidence 67899999998764
No 75
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.95 E-value=1.9e-09 Score=80.98 Aligned_cols=90 Identities=12% Similarity=0.043 Sum_probs=66.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCC--ch--
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACI--EV-- 75 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~--~i-- 75 (156)
.|.+++.+...+. .+|+++|+++++++.|++|++. .++++ ++++.+|+.+..+ ...+||+|+++.+.. ..
T Consensus 65 ~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~-~~~~~---v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~ 139 (202)
T 2fpo_A 65 SGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLAT-LKAGN---ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEE 139 (202)
T ss_dssp TCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHH-TTCCS---EEEECSCHHHHHSSCCCCEEEEEECCSSSTTTHHH
T ss_pred cCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHH-cCCCc---EEEEECCHHHHHhhcCCCCCEEEECCCCCCCcHHH
Confidence 3667764333332 5999999999999999999998 47777 9999999865322 246799999998733 22
Q ss_pred -HHHHHh--hCCCCcEEEEEecc
Q psy14971 76 -PKEILA--QLKPGGRLVFHKGL 95 (156)
Q Consensus 76 -~~~l~~--~L~pGGrLv~~~~~ 95 (156)
.+.+.+ .|+|||++++....
T Consensus 140 ~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 140 TINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEEG
T ss_pred HHHHHHhcCccCCCcEEEEEECC
Confidence 233433 49999999987764
No 76
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.94 E-value=4.5e-09 Score=80.33 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=68.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......+ .+|+++|+++++++.|+++++.. +..| ++++.+|+.+.....++||.|++.....+++
T Consensus 33 G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-~~~~---v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 106 (239)
T 1xxl_A 33 GHTALAFSPYV--QECIGVDATKEMVEVASSFAQEK-GVEN---VRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRKA 106 (239)
T ss_dssp SHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHH-TCCS---EEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHHH
T ss_pred CHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc-CCCC---eEEEecccccCCCCCCcEEEEEECCchhhccCHHHH
Confidence 55555433333 59999999999999999999884 8778 9999999876433457899999998776543
Q ss_pred -HHHHhhCCCCcEEEEEec
Q psy14971 77 -KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 107 l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 107 VREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEc
Confidence 456889999999999643
No 77
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.94 E-value=1.4e-09 Score=83.97 Aligned_cols=83 Identities=12% Similarity=0.045 Sum_probs=63.3
Q ss_pred CchHHH-HHHh---cCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--CC--CCCCcCEEEEccCC
Q psy14971 1 MGDLNV-IVGI---KGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--HA--EEGPYDIIHLGAAC 72 (156)
Q Consensus 1 ~G~la~-la~l---~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--~~--~~~~fD~I~i~~~~ 72 (156)
.|++++ +|+. +++.++|+++|+++++++.|+ . +. +| +++++||+.+. ++ ...+||+|+++++.
T Consensus 92 tG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~-~~-~~---v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~~ 162 (236)
T 2bm8_A 92 NGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----S-DM-EN---ITLHQGDCSDLTTFEHLREMAHPLIFIDNAH 162 (236)
T ss_dssp TSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----G-GC-TT---EEEEECCSSCSGGGGGGSSSCSSEEEEESSC
T ss_pred CCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----c-cC-Cc---eEEEECcchhHHHHHhhccCCCCEEEECCch
Confidence 367775 4555 477899999999999999887 2 22 46 99999999874 22 33479999999886
Q ss_pred CchHH---HHHh-hCCCCcEEEEE
Q psy14971 73 IEVPK---EILA-QLKPGGRLVFH 92 (156)
Q Consensus 73 ~~i~~---~l~~-~L~pGGrLv~~ 92 (156)
..++. .+.+ +|||||+|++.
T Consensus 163 ~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 163 ANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp SSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred HhHHHHHHHHHHhhCCCCCEEEEE
Confidence 55554 3454 99999999994
No 78
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.94 E-value=3.7e-09 Score=82.51 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=68.6
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhh---hcCCCCccceEEEEccCCCCCC-------CCCCcCEEEEcc
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKL---NIKQNRKSFKNVSVKDGSKGHA-------EEGPYDIIHLGA 70 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~---~~g~~n~~~v~~~~gD~~~~~~-------~~~~fD~I~i~~ 70 (156)
.|.+++++....+..+|+++|+++++++.|++|++. + ++.++ ++++++|..+..+ ...+||+|+++.
T Consensus 47 ~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-~l~~~--v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nP 123 (260)
T 2ozv_A 47 AGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA-AFSAR--IEVLEADVTLRAKARVEAGLPDEHFHHVIMNP 123 (260)
T ss_dssp SSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT-TTGGG--EEEEECCTTCCHHHHHHTTCCTTCEEEEEECC
T ss_pred HhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC-CCcce--EEEEeCCHHHHhhhhhhhccCCCCcCEEEECC
Confidence 377777655555668999999999999999999987 5 55433 9999999987521 246799999984
Q ss_pred CCCc------------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 71 ACIE------------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 71 ~~~~------------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+... +...+.+.|||||++++....
T Consensus 124 Py~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 124 PYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp CC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 3321 123456899999999997754
No 79
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.94 E-value=2.6e-09 Score=82.87 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=67.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCc----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIE---- 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~---- 74 (156)
.|.+++++...++ ++|+++|+++++++.|++|++.+ ++.++ ++++.+|+.+... ..++||+|+++.+...
T Consensus 60 ~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~-~~~~~--v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~ 135 (259)
T 3lpm_A 60 NGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYN-QLEDQ--IEIIEYDLKKITDLIPKERADIVTCNPPYFATPDT 135 (259)
T ss_dssp TTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHT-TCTTT--EEEECSCGGGGGGTSCTTCEEEEEECCCC------
T ss_pred hhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHC-CCccc--EEEEECcHHHhhhhhccCCccEEEECCCCCCCccc
Confidence 3667766544454 49999999999999999999984 77533 9999999876432 2478999999755321
Q ss_pred ----------------------hHHHHHhhCCCCcEEEEEec
Q psy14971 75 ----------------------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 ----------------------i~~~l~~~L~pGGrLv~~~~ 94 (156)
+...+.+.|+|||++++...
T Consensus 136 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 136 SLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp -----------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 22356789999999999764
No 80
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.93 E-value=7.1e-09 Score=82.14 Aligned_cols=89 Identities=13% Similarity=0.117 Sum_probs=68.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCc---CEEEEccCCC----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPY---DIIHLGAACI---- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~f---D~I~i~~~~~---- 73 (156)
.|.+++..... +..+|+++|+++++++.|++|++. .++.++ ++++++|..+..+ +.| |+|+++.+..
T Consensus 134 sG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~-~~l~~~--v~~~~~D~~~~~~--~~f~~~D~IvsnPPyi~~~~ 207 (284)
T 1nv8_A 134 SGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAER-HGVSDR--FFVRKGEFLEPFK--EKFASIEMILSNPPYVKSSA 207 (284)
T ss_dssp TSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHH-TTCTTS--EEEEESSTTGGGG--GGTTTCCEEEECCCCBCGGG
T ss_pred hhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH-cCCCCc--eEEEECcchhhcc--cccCCCCEEEEcCCCCCccc
Confidence 36777644344 678999999999999999999998 487654 9999999876443 468 9999984332
Q ss_pred ---------------------chHHHHH-hhCCCCcEEEEEecc
Q psy14971 74 ---------------------EVPKEIL-AQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ---------------------~i~~~l~-~~L~pGGrLv~~~~~ 95 (156)
.+-..+. +.|+|||+|++.++.
T Consensus 208 ~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 208 HLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp SCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred ccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 1234667 899999999998764
No 81
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.92 E-value=7.5e-09 Score=80.09 Aligned_cols=88 Identities=15% Similarity=0.163 Sum_probs=68.7
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++.. ++.. +.+|+++|+++++++.|+++++. .++.++ ++++.+|+.+.....++||+|++.....+++
T Consensus 73 G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~--~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 147 (273)
T 3bus_A 73 GKPAVRLATAR--DVRVTGISISRPQVNQANARATA-AGLANR--VTFSYADAMDLPFEDASFDAVWALESLHHMPDRGR 147 (273)
T ss_dssp SHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHH-TTCTTT--EEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHH
T ss_pred CHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHh-cCCCcc--eEEEECccccCCCCCCCccEEEEechhhhCCCHHH
Confidence 555543 4433 37999999999999999999988 476533 9999999876433457899999998887664
Q ss_pred --HHHHhhCCCCcEEEEEec
Q psy14971 77 --KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 148 ~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 148 ALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEe
Confidence 356789999999998753
No 82
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.92 E-value=3.3e-09 Score=83.04 Aligned_cols=90 Identities=14% Similarity=0.190 Sum_probs=68.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc------
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------ 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------ 74 (156)
.|.+++......+..+|+++|+++++++.|++|++.+ ++++ ++++.+|..+..+ .++||.|+++.+...
T Consensus 120 sG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~-~~~~---v~~~~~d~~~~~~-~~~fD~Iv~npPy~~~~~~~l 194 (276)
T 2b3t_A 120 TGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL-AIKN---IHILQSDWFSALA-GQQFAMIVSNPPYIDEQDPHL 194 (276)
T ss_dssp TSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH-TCCS---EEEECCSTTGGGT-TCCEEEEEECCCCBCTTCHHH
T ss_pred ccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CCCc---eEEEEcchhhhcc-cCCccEEEECCCCCCcccccc
Confidence 3666664433345689999999999999999999984 8878 9999999876443 468999999854321
Q ss_pred -------------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 -------------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 -------------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+.+.+.+.|+|||++++..+.
T Consensus 195 ~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~ 240 (276)
T 2b3t_A 195 QQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW 240 (276)
T ss_dssp HSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS
T ss_pred ChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc
Confidence 113457899999999997654
No 83
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.92 E-value=8.5e-09 Score=77.36 Aligned_cols=86 Identities=20% Similarity=0.224 Sum_probs=66.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccC--CCchH---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAA--CIEVP--- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~--~~~i~--- 76 (156)
|.++......++ +|+++|+++++++.|+++++.. + .+ ++++.+|..+.....++||+|++... ....+
T Consensus 50 G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~-~~---~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~ 122 (227)
T 1ve3_A 50 GGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-E-SN---VEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELN 122 (227)
T ss_dssp SHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-T-CC---CEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHH
T ss_pred CHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-C-CC---ceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHH
Confidence 566655444444 9999999999999999999873 5 56 99999998763333468999999877 44332
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||++++...
T Consensus 123 ~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 123 QVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEec
Confidence 356789999999998765
No 84
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.92 E-value=1.8e-09 Score=81.16 Aligned_cols=86 Identities=13% Similarity=0.011 Sum_probs=62.1
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh-----------cCCCCccceEEEEccCCCCCCCC-CCcCEEEE
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLN-----------IKQNRKSFKNVSVKDGSKGHAEE-GPYDIIHL 68 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~-----------~g~~n~~~v~~~~gD~~~~~~~~-~~fD~I~i 68 (156)
|..+. +++. | .+|+++|++++|++.|+++.+.. ....+ ++++++|+.+..... ++||+|++
T Consensus 34 G~~~~~la~~-g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~d~~~l~~~~~~~fD~v~~ 107 (203)
T 1pjz_A 34 SQDMSWLSGQ-G--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG---IEIWCGDFFALTARDIGHCAAFYD 107 (203)
T ss_dssp SHHHHHHHHH-C--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSS---SEEEEECCSSSTHHHHHSEEEEEE
T ss_pred cHhHHHHHHC-C--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCc---cEEEECccccCCcccCCCEEEEEE
Confidence 55554 4443 3 69999999999999999886520 01246 999999998744333 68999999
Q ss_pred ccCCCchH--------HHHHhhCCCCcEEEEEe
Q psy14971 69 GAACIEVP--------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 69 ~~~~~~i~--------~~l~~~L~pGGrLv~~~ 93 (156)
.+....++ ..+.+.|||||++++..
T Consensus 108 ~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 108 RAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 87776554 24678999999944443
No 85
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.91 E-value=3.1e-09 Score=77.31 Aligned_cols=87 Identities=18% Similarity=0.216 Sum_probs=67.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---H
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---K 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---~ 77 (156)
|.++..+...+ .+|+++|+++++++.|+++++. .+. .+ ++++.+|..+..+....||.|+++...+++. .
T Consensus 45 G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~-~~~~~~---~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~l~ 118 (192)
T 1l3i_A 45 GGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQR-HGLGDN---VTLMEGDAPEALCKIPDIDIAVVGGSGGELQEILR 118 (192)
T ss_dssp SHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHH-TTCCTT---EEEEESCHHHHHTTSCCEEEEEESCCTTCHHHHHH
T ss_pred CHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHH-cCCCcc---eEEEecCHHHhcccCCCCCEEEECCchHHHHHHHH
Confidence 55555443333 7999999999999999999988 477 56 9999999765334335899999998766554 4
Q ss_pred HHHhhCCCCcEEEEEec
Q psy14971 78 EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 ~l~~~L~pGGrLv~~~~ 94 (156)
.+.+.|+|||++++...
T Consensus 119 ~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 119 IIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HHHHTEEEEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEEec
Confidence 56789999999999764
No 86
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.91 E-value=6.6e-10 Score=94.05 Aligned_cols=89 Identities=18% Similarity=0.129 Sum_probs=69.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCc-----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIE----- 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~----- 74 (156)
|..++ +|++++..++|+++|+++++++.+++|+++ +|+ . ++++.+|+.+... ..++||+|+++++|+.
T Consensus 113 G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r-~G~-~---v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~r 187 (464)
T 3m6w_A 113 GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER-WGA-P---LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFR 187 (464)
T ss_dssp CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-HCC-C---CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTT
T ss_pred CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCC-e---EEEEECCHHHhhhhccccCCEEEECCCcCCccccc
Confidence 55564 677777779999999999999999999999 486 4 8899999765321 2468999999988731
Q ss_pred -----------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 -----------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 -----------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+.+.+.+.|||||+||+.+++
T Consensus 188 r~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 188 KDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp TCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred cChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 123456789999999997653
No 87
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.91 E-value=5.4e-09 Score=85.78 Aligned_cols=89 Identities=17% Similarity=0.144 Sum_probs=69.8
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh---c-C-C--CCccceEEEEccCCCC------CCCCCCcCEEE
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLN---I-K-Q--NRKSFKNVSVKDGSKG------HAEEGPYDIIH 67 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~---~-g-~--~n~~~v~~~~gD~~~~------~~~~~~fD~I~ 67 (156)
|.++. ++...++.++|+++|+++++++.|+++++.. . | . .| ++++.+|+.+. ....++||+|+
T Consensus 95 G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~---v~~~~~d~~~l~~~~~~~~~~~~fD~V~ 171 (383)
T 4fsd_A 95 GRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSN---VRFLKGFIENLATAEPEGVPDSSVDIVI 171 (383)
T ss_dssp SHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCC---EEEEESCTTCGGGCBSCCCCTTCEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCc---eEEEEccHHHhhhcccCCCCCCCEEEEE
Confidence 56664 5667778889999999999999999998752 0 2 2 47 99999998763 22346899999
Q ss_pred EccCCCchH------HHHHhhCCCCcEEEEEe
Q psy14971 68 LGAACIEVP------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 68 i~~~~~~i~------~~l~~~L~pGGrLv~~~ 93 (156)
++.....++ ..+.+.|||||+|++..
T Consensus 172 ~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 172 SNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999876553 46789999999999964
No 88
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.90 E-value=1.1e-08 Score=80.78 Aligned_cols=85 Identities=18% Similarity=0.114 Sum_probs=68.6
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCch----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV---- 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i---- 75 (156)
|.++. +++..+ .+|+++|+++++++.|+++++. .++. + ++++.+|..+. .++||+|++.....++
T Consensus 84 G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~ 154 (302)
T 3hem_A 84 GSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDE-VDSPRR---KEVRIQGWEEF---DEPVDRIVSLGAFEHFADGA 154 (302)
T ss_dssp SHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHH-SCCSSC---EEEEECCGGGC---CCCCSEEEEESCGGGTTCCS
T ss_pred cHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHh-cCCCCc---eEEEECCHHHc---CCCccEEEEcchHHhcCccc
Confidence 55664 444445 7999999999999999999988 4776 6 99999998764 5789999999887666
Q ss_pred --------H---HHHHhhCCCCcEEEEEecc
Q psy14971 76 --------P---KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 76 --------~---~~l~~~L~pGGrLv~~~~~ 95 (156)
+ ..+.+.|||||++++....
T Consensus 155 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 155 GDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp SCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred cccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 2 3567899999999997653
No 89
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.90 E-value=6.2e-09 Score=82.73 Aligned_cols=87 Identities=17% Similarity=0.082 Sum_probs=68.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++. +++..+ .+|+++|+++++++.|+++++. .++. + ++++.+|+.+.....+.||+|++......++
T Consensus 129 G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~ 202 (312)
T 3vc1_A 129 GGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARE-LRIDDH---VRSRVCNMLDTPFDKGAVTASWNNESTMYVDLHD 202 (312)
T ss_dssp SHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHH-TTCTTT---EEEEECCTTSCCCCTTCEEEEEEESCGGGSCHHH
T ss_pred CHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHH-cCCCCc---eEEEECChhcCCCCCCCEeEEEECCchhhCCHHH
Confidence 55664 444443 7999999999999999999998 4775 5 9999999976433457899999987765442
Q ss_pred --HHHHhhCCCCcEEEEEec
Q psy14971 77 --KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 203 ~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 203 LFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEc
Confidence 457889999999998764
No 90
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.89 E-value=9.1e-09 Score=77.96 Aligned_cols=86 Identities=17% Similarity=0.034 Sum_probs=64.7
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC---CCCCCCcCEEEEccCCCch-
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG---HAEEGPYDIIHLGAACIEV- 75 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~---~~~~~~fD~I~i~~~~~~i- 75 (156)
.|.++. ++..++ .++|+++|+++++++.+.++.+. . .| +.++.+|+... .+..++||+|+++...+.-
T Consensus 68 tG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~-~--~~---v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~~~~~ 140 (210)
T 1nt2_A 68 SGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE-R--NN---IIPLLFDASKPWKYSGIVEKVDLIYQDIAQKNQI 140 (210)
T ss_dssp TSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH-C--SS---EEEECSCTTCGGGTTTTCCCEEEEEECCCSTTHH
T ss_pred CCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc-C--CC---eEEEEcCCCCchhhcccccceeEEEEeccChhHH
Confidence 366665 566666 68999999999998877776655 2 47 99999998763 2223689999998654432
Q ss_pred ---HHHHHhhCCCCcEEEEEe
Q psy14971 76 ---PKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 ---~~~l~~~L~pGGrLv~~~ 93 (156)
...+.+.|||||+|++.+
T Consensus 141 ~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 141 EILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEE
Confidence 246788999999999985
No 91
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.89 E-value=8.2e-09 Score=75.84 Aligned_cols=85 Identities=14% Similarity=0.108 Sum_probs=66.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++...... +.+|+++|+++++++.|+++++.. +.++ ++++.+|..+... ..+||+|++......++
T Consensus 44 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~-~~~~---~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~ 116 (199)
T 2xvm_A 44 GRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIE-NLDN---LHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIP 116 (199)
T ss_dssp SHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH-TCTT---EEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHH
T ss_pred CHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhC-CCCC---cEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHH
Confidence 5555433333 469999999999999999999884 7777 9999999876433 57899999998766543
Q ss_pred ---HHHHhhCCCCcEEEEEe
Q psy14971 77 ---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|+|||++++..
T Consensus 117 ~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 117 GLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEE
Confidence 35678999999988754
No 92
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.89 E-value=1.9e-09 Score=85.51 Aligned_cols=81 Identities=16% Similarity=0.098 Sum_probs=65.8
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---------HHHH
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---------KEIL 80 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---------~~l~ 80 (156)
...+..+|+++|+++++++.|++++.. .+..++ ++++.+|+.+.... ++||+|++......++ ..+.
T Consensus 139 ~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~ 214 (305)
T 3ocj_A 139 SACPGVQLVGIDYDPEALDGATRLAAG-HALAGQ--ITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFW 214 (305)
T ss_dssp TTCTTCEEEEEESCHHHHHHHHHHHTT-STTGGG--EEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHH
T ss_pred hcCCCCeEEEEECCHHHHHHHHHHHHh-cCCCCc--eEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHH
Confidence 345678999999999999999999988 476554 99999998774333 7899999988766543 4567
Q ss_pred hhCCCCcEEEEEec
Q psy14971 81 AQLKPGGRLVFHKG 94 (156)
Q Consensus 81 ~~L~pGGrLv~~~~ 94 (156)
+.|||||+|++...
T Consensus 215 ~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 215 QALKPGGALVTSFL 228 (305)
T ss_dssp HHEEEEEEEEEECC
T ss_pred HhcCCCeEEEEEec
Confidence 89999999999764
No 93
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.89 E-value=4e-09 Score=82.43 Aligned_cols=87 Identities=15% Similarity=0.163 Sum_probs=68.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCC-CCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGH-AEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~-~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++...... +.+|+++|+++++++.|+++++. .++ .+ ++++.+|+.+.. ...++||+|++......++
T Consensus 80 G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~ 153 (285)
T 4htf_A 80 GQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEA-KGVSDN---MQFIHCAAQDVASHLETPVDLILFHAVLEWVADPR 153 (285)
T ss_dssp CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC--CCGGG---EEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHH
T ss_pred hHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHh-cCCCcc---eEEEEcCHHHhhhhcCCCceEEEECchhhcccCHH
Confidence 5555433333 47999999999999999999988 477 46 999999987643 2357899999998876554
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 154 ~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 154 SVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEEe
Confidence 467889999999999764
No 94
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.88 E-value=1e-08 Score=82.46 Aligned_cols=68 Identities=9% Similarity=0.026 Sum_probs=55.9
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC---CCCcCEEEEccCCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE---EGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~---~~~fD~I~i~~~~~ 73 (156)
|..++ +|+++++.++|+++|+++.+++.+++|+++ +|+.| ++++.+|+.+.... ..+||+|+++++|+
T Consensus 114 G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r-~g~~~---v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcS 185 (309)
T 2b9e_A 114 GNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR-AGVSC---CELAEEDFLAVSPSDPRYHEVHYILLDPSCS 185 (309)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-TTCCS---EEEEECCGGGSCTTCGGGTTEEEEEECCCCC
T ss_pred hHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-cCCCe---EEEEeCChHhcCccccccCCCCEEEEcCCcC
Confidence 55554 677777789999999999999999999999 59888 99999998764332 25799999998773
No 95
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.88 E-value=9.5e-09 Score=77.76 Aligned_cols=87 Identities=16% Similarity=0.033 Sum_probs=68.1
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CCCCCcCEEEEccCCCch--
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AEEGPYDIIHLGAACIEV-- 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~~~~fD~I~i~~~~~~i-- 75 (156)
|.++. ++..+++.++|+++|+++++++.++++++. . .| ++++.+|+.+.. +....||+|+++.+.+..
T Consensus 85 G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-~--~~---v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~~~~~~ 158 (227)
T 1g8a_A 85 GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-R--RN---IVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAK 158 (227)
T ss_dssp TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-C--TT---EEEEECCTTCGGGGTTTCCCEEEEEECCCSTTHHH
T ss_pred CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-c--CC---CEEEEccCCCcchhhcccCCceEEEECCCCHhHHH
Confidence 66665 566778789999999999999999999876 3 57 999999987621 113579999998875533
Q ss_pred --HHHHHhhCCCCcEEEEEec
Q psy14971 76 --PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 --~~~l~~~L~pGGrLv~~~~ 94 (156)
...+.+.|||||++++...
T Consensus 159 ~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 159 ILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEe
Confidence 3457789999999999753
No 96
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.88 E-value=3.4e-09 Score=84.61 Aligned_cols=90 Identities=17% Similarity=0.120 Sum_probs=62.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh----cCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCCch-
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN----IKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACIEV- 75 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~----~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~~i- 75 (156)
|.++.......+..+|+++|+++++++.|++++... +.-.+ ++++.+|+.+.+.. .++||+|+++...+..
T Consensus 95 G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~r---v~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~ 171 (294)
T 3adn_A 95 GAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPR---FKLVIDDGVNFVNQTSQTFDVIISDCTDPIGP 171 (294)
T ss_dssp CHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTT---CCEECSCSCC---CCCCCEEEEEECC------
T ss_pred hHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCc---eEEEEChHHHHHhhcCCCccEEEECCCCccCc
Confidence 445543333344689999999999999999998762 12235 99999999875543 4689999998765422
Q ss_pred ---------HHHHHhhCCCCcEEEEEec
Q psy14971 76 ---------PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 ---------~~~l~~~L~pGGrLv~~~~ 94 (156)
-+.+.+.|+|||+|++..+
T Consensus 172 ~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 172 GESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ----CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred chhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 2356889999999999764
No 97
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.87 E-value=3.8e-09 Score=83.57 Aligned_cols=88 Identities=19% Similarity=0.205 Sum_probs=64.1
Q ss_pred CchHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC---------------------------------------
Q psy14971 1 MGDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ--------------------------------------- 40 (156)
Q Consensus 1 ~G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~--------------------------------------- 40 (156)
.|.+++. +...+ ..+|+++|+++.+++.|+++++.. +.
T Consensus 57 ~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 134 (292)
T 3g07_A 57 VGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHY-LSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASR 134 (292)
T ss_dssp TCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------------------
T ss_pred CCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhh-hhhhccccccccccccccccccccccccccccccchhhhcc
Confidence 3667764 44443 479999999999999999998762 32
Q ss_pred -------------------CCccceEEEEccCCCCC-----CCCCCcCEEEEccCCCch------------HHHHHhhCC
Q psy14971 41 -------------------NRKSFKNVSVKDGSKGH-----AEEGPYDIIHLGAACIEV------------PKEILAQLK 84 (156)
Q Consensus 41 -------------------~n~~~v~~~~gD~~~~~-----~~~~~fD~I~i~~~~~~i------------~~~l~~~L~ 84 (156)
.| |+++.+|..... ...+.||+|++......+ ...+.+.|+
T Consensus 135 g~~~~p~~~~~~~~~~~~p~~---v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~Lk 211 (292)
T 3g07_A 135 GPIAAPQVPLDGADTSVFPNN---VVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLR 211 (292)
T ss_dssp -------CCSSTTCCSSTTTT---EEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred Ccccccccccccccccccccc---ceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhC
Confidence 36 999999987543 135789999998876333 246789999
Q ss_pred CCcEEEEEe
Q psy14971 85 PGGRLVFHK 93 (156)
Q Consensus 85 pGGrLv~~~ 93 (156)
|||+|++..
T Consensus 212 pGG~lil~~ 220 (292)
T 3g07_A 212 PGGILVLEP 220 (292)
T ss_dssp EEEEEEEEC
T ss_pred CCcEEEEec
Confidence 999999954
No 98
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.86 E-value=1e-08 Score=80.81 Aligned_cols=88 Identities=13% Similarity=0.013 Sum_probs=69.0
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC-----------CCCCCcCEEEEcc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH-----------AEEGPYDIIHLGA 70 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~-----------~~~~~fD~I~i~~ 70 (156)
|.++.++....|+++|+++|+++.|++.|++++.. ..+ ++++.+|..+.. .+...||+|++..
T Consensus 92 G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~---v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~ 165 (274)
T 2qe6_A 92 QNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPN---TAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVG 165 (274)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTT---EEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETT
T ss_pred ChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCC---eEEEEeeCCCchhhhccchhhccCCCCCCEEEEEec
Confidence 66666666667789999999999999999999854 246 999999986521 1124799999998
Q ss_pred CCCchH--------HHHHhhCCCCcEEEEEecc
Q psy14971 71 ACIEVP--------KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 71 ~~~~i~--------~~l~~~L~pGGrLv~~~~~ 95 (156)
.++.++ ..+.+.|+|||+|++....
T Consensus 166 vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 166 MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 877654 2567899999999998754
No 99
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.86 E-value=2.4e-08 Score=72.62 Aligned_cols=88 Identities=14% Similarity=0.073 Sum_probs=67.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCC-ccceEEEEccCCCCCCCCCCcCEEEEccCCCc------
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNR-KSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------ 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n-~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------ 74 (156)
|.++..+... ..+|+++|+++++++.|+++++. .+.++ + ++++.+|..+..+ ..+||+|+++.+...
T Consensus 64 G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~-~~~~~~~--~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~ 137 (194)
T 1dus_A 64 GVIGIALADE--VKSTTMADINRRAIKLAKENIKL-NNLDNYD--IRVVHSDLYENVK-DRKYNKIITNPPIRAGKEVLH 137 (194)
T ss_dssp SHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHH-TTCTTSC--EEEEECSTTTTCT-TSCEEEEEECCCSTTCHHHHH
T ss_pred CHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHH-cCCCccc--eEEEECchhcccc-cCCceEEEECCCcccchhHHH
Confidence 5555543333 57999999999999999999988 37653 3 8999999887544 468999999887653
Q ss_pred -hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 -VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 -i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+...+.+.|+|||++++....
T Consensus 138 ~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 138 RIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp HHHHHHHHHEEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEECC
Confidence 124567899999999998764
No 100
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.86 E-value=6.3e-09 Score=77.49 Aligned_cols=84 Identities=14% Similarity=0.132 Sum_probs=66.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---HH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---KE 78 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---~~ 78 (156)
|.++..+... +..+|+++|+++++++.|+++++. .+..+ ++++.+|..+.. ...||+|+++...+.+. +.
T Consensus 72 G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~---v~~~~~d~~~~~--~~~fD~i~~~~~~~~~~~~l~~ 144 (205)
T 3grz_A 72 GILAIAAHKL-GAKSVLATDISDESMTAAEENAAL-NGIYD---IALQKTSLLADV--DGKFDLIVANILAEILLDLIPQ 144 (205)
T ss_dssp SHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHH-TTCCC---CEEEESSTTTTC--CSCEEEEEEESCHHHHHHHGGG
T ss_pred CHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH-cCCCc---eEEEeccccccC--CCCceEEEECCcHHHHHHHHHH
Confidence 6666544443 347999999999999999999998 48888 999999987643 36899999988766543 34
Q ss_pred HHhhCCCCcEEEEE
Q psy14971 79 ILAQLKPGGRLVFH 92 (156)
Q Consensus 79 l~~~L~pGGrLv~~ 92 (156)
+.+.|+|||++++.
T Consensus 145 ~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 145 LDSHLNEDGQVIFS 158 (205)
T ss_dssp SGGGEEEEEEEEEE
T ss_pred HHHhcCCCCEEEEE
Confidence 56889999999996
No 101
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.85 E-value=1.5e-09 Score=78.56 Aligned_cols=85 Identities=11% Similarity=0.092 Sum_probs=64.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHH--
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEI-- 79 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l-- 79 (156)
|.++..+.. +..+|+++|+++++++.|+++++. .++++ ++++.+|..+..+ ..+||.|+++.. ....+.+
T Consensus 47 G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~---~~~~~~d~~~~~~-~~~~D~i~~~~~-~~~~~~l~~ 118 (183)
T 2yxd_A 47 GGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAK-FNIKN---CQIIKGRAEDVLD-KLEFNKAFIGGT-KNIEKIIEI 118 (183)
T ss_dssp SHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHH-TTCCS---EEEEESCHHHHGG-GCCCSEEEECSC-SCHHHHHHH
T ss_pred CHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHH-cCCCc---EEEEECCcccccc-CCCCcEEEECCc-ccHHHHHHH
Confidence 555554333 568999999999999999999998 48778 9999999876333 368999999988 4444322
Q ss_pred HhhCCCCcEEEEEecc
Q psy14971 80 LAQLKPGGRLVFHKGL 95 (156)
Q Consensus 80 ~~~L~pGGrLv~~~~~ 95 (156)
...+ |||++++....
T Consensus 119 ~~~~-~gG~l~~~~~~ 133 (183)
T 2yxd_A 119 LDKK-KINHIVANTIV 133 (183)
T ss_dssp HHHT-TCCEEEEEESC
T ss_pred HhhC-CCCEEEEEecc
Confidence 2233 99999998753
No 102
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.84 E-value=8.8e-09 Score=80.34 Aligned_cols=86 Identities=13% Similarity=-0.010 Sum_probs=61.0
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh--------c--------CCCCccceEEEEccCCCCCCC-CCCcC
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN--------I--------KQNRKSFKNVSVKDGSKGHAE-EGPYD 64 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~--------~--------g~~n~~~v~~~~gD~~~~~~~-~~~fD 64 (156)
|..+......| .+|+|+|+++.+++.|+++.... . ...+ ++++++|+.+.... .++||
T Consensus 80 G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~D~~~l~~~~~~~FD 154 (252)
T 2gb4_A 80 AIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS---ISLYCCSIFDLPRANIGKFD 154 (252)
T ss_dssp CTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS---EEEEESCTTTGGGGCCCCEE
T ss_pred cHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc---eEEEECccccCCcccCCCEE
Confidence 45554322233 59999999999999998776310 0 1246 99999999874433 27899
Q ss_pred EEEEccCCCchH--------HHHHhhCCCCcEEEEE
Q psy14971 65 IIHLGAACIEVP--------KEILAQLKPGGRLVFH 92 (156)
Q Consensus 65 ~I~i~~~~~~i~--------~~l~~~L~pGGrLv~~ 92 (156)
+|+..+....++ ..+.+.|||||+|++.
T Consensus 155 ~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 155 RIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 999887765543 3467899999999653
No 103
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.84 E-value=1.3e-08 Score=79.89 Aligned_cols=88 Identities=20% Similarity=0.197 Sum_probs=68.3
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++. ++...+ .+|+++|+++.+++.|+++++.. ++..+ ++++.+|+.+.....++||+|++.....+++
T Consensus 94 G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~-~~~~~--~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 168 (297)
T 2o57_A 94 GGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQA-GLADN--ITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK 168 (297)
T ss_dssp SHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHH-TCTTT--EEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH
T ss_pred CHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc-CCCcc--eEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHH
Confidence 55554 444443 69999999999999999999884 76432 9999999876433457899999998876553
Q ss_pred --HHHHhhCCCCcEEEEEec
Q psy14971 77 --KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 169 ~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 169 VFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEe
Confidence 467899999999999754
No 104
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.84 E-value=8.5e-09 Score=79.03 Aligned_cols=85 Identities=16% Similarity=0.104 Sum_probs=67.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch--H--
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV--P-- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i--~-- 76 (156)
|.++. ++... +.+|+++|+++++++.|++++.. . .+ ++++.+|+.+.....++||+|++.....++ +
T Consensus 67 G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-~--~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 138 (266)
T 3ujc_A 67 GGGCMYINEKY--GAHTHGIDICSNIVNMANERVSG-N--NK---IIFEANDILTKEFPENNFDLIYSRDAILALSLENK 138 (266)
T ss_dssp SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCS-C--TT---EEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHH
T ss_pred CHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhc-C--CC---eEEEECccccCCCCCCcEEEEeHHHHHHhcChHHH
Confidence 55554 34444 47999999999999999999876 2 57 999999997743345789999999988877 3
Q ss_pred ----HHHHhhCCCCcEEEEEec
Q psy14971 77 ----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 139 ~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 139 NKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEe
Confidence 356789999999999763
No 105
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.83 E-value=5.3e-09 Score=79.87 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=61.9
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH--------HHHhhCCC
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK--------EILAQLKP 85 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~--------~l~~~L~p 85 (156)
..+|+++|+++++++.|++++.. .+..+ ++++.+|+.+.....++||+|++......+++ .+.+.|+|
T Consensus 102 ~~~v~~vD~s~~~~~~a~~~~~~-~~~~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 177 (241)
T 2ex4_A 102 FREVDMVDITEDFLVQAKTYLGE-EGKRV---RNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRP 177 (241)
T ss_dssp CSEEEEEESCHHHHHHHHHHTGG-GGGGE---EEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHhhh-cCCce---EEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCC
Confidence 46999999999999999999987 34446 99999998664444568999999988766542 45789999
Q ss_pred CcEEEEEec
Q psy14971 86 GGRLVFHKG 94 (156)
Q Consensus 86 GGrLv~~~~ 94 (156)
||+|++...
T Consensus 178 gG~l~i~~~ 186 (241)
T 2ex4_A 178 NGIIVIKDN 186 (241)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEc
Confidence 999999654
No 106
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.82 E-value=1.5e-08 Score=79.51 Aligned_cols=88 Identities=14% Similarity=0.199 Sum_probs=68.7
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++.. +...++..+|+++|+++.+++.|++++.. .+. | ++++.+|+.+. +..++||.|++......++
T Consensus 34 G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~-~---v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~ 107 (284)
T 3gu3_A 34 GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL-LPY-D---SEFLEGDATEI-ELNDKYDIAICHAFLLHMTTPET 107 (284)
T ss_dssp THHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-SSS-E---EEEEESCTTTC-CCSSCEEEEEEESCGGGCSSHHH
T ss_pred CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-cCC-c---eEEEEcchhhc-CcCCCeeEEEECChhhcCCCHHH
Confidence 556654 33443358999999999999999999987 354 6 99999999863 3346899999998876554
Q ss_pred --HHHHhhCCCCcEEEEEecc
Q psy14971 77 --KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|||||++++....
T Consensus 108 ~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 108 MLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp HHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEEEecc
Confidence 3567899999999987643
No 107
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.82 E-value=1.6e-08 Score=79.09 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=66.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++..+... +.+|+++|+++.+++.|+++++.. +. + ++++.+|+.+... .++||+|++......++
T Consensus 132 G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~-~~-~---~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~ 203 (286)
T 3m70_A 132 GRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKE-NL-N---ISTALYDINAANI-QENYDFIVSTVVFMFLNRERVP 203 (286)
T ss_dssp CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-TC-C---EEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHH
T ss_pred CHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHc-CC-c---eEEEEeccccccc-cCCccEEEEccchhhCCHHHHH
Confidence 5666543333 369999999999999999999984 76 7 9999999876433 67899999998776442
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||++++...
T Consensus 204 ~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 204 SIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp HHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEe
Confidence 356789999999887653
No 108
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.82 E-value=1.4e-08 Score=79.99 Aligned_cols=86 Identities=8% Similarity=0.015 Sum_probs=66.6
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc--CCCCccceEEEEccCCCCCCCC------CCcCEEEEccCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNI--KQNRKSFKNVSVKDGSKGHAEE------GPYDIIHLGAAC 72 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~--g~~n~~~v~~~~gD~~~~~~~~------~~fD~I~i~~~~ 72 (156)
|.++. ++....+..+|+++|+++.+++.|+++++. . ...+ ++++++|+.+..... ++||+|++....
T Consensus 48 G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~---v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l 123 (299)
T 3g5t_A 48 GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEG-SPDTYKN---VSFKISSSDDFKFLGADSVDKQKIDMITAVECA 123 (299)
T ss_dssp THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHH-CC-CCTT---EEEEECCTTCCGGGCTTTTTSSCEEEEEEESCG
T ss_pred CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHh-ccCCCCc---eEEEEcCHHhCCccccccccCCCeeEEeHhhHH
Confidence 55554 344445679999999999999999999987 3 2356 999999997643333 689999999877
Q ss_pred Cch-----HHHHHhhCCCCcEEEE
Q psy14971 73 IEV-----PKEILAQLKPGGRLVF 91 (156)
Q Consensus 73 ~~i-----~~~l~~~L~pGGrLv~ 91 (156)
+.+ ...+.+.|+|||+|++
T Consensus 124 ~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 124 HWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhCHHHHHHHHHHhcCCCcEEEE
Confidence 654 2457889999999998
No 109
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.82 E-value=1e-08 Score=85.54 Aligned_cols=88 Identities=26% Similarity=0.350 Sum_probs=67.3
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCc----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIE---- 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~---- 74 (156)
|..+. +++.. +.++|+++|+++.+++.+++|+++ .|+ + ++++.+|+.+.. .....||+|+++++|+.
T Consensus 258 G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~-~g~-~---~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~ 331 (429)
T 1sqg_A 258 GGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKR-LGM-K---ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVI 331 (429)
T ss_dssp CHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHH-TTC-C---CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGT
T ss_pred hHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHH-cCC-C---eEEEeCchhhchhhcccCCCCEEEEeCCCCccccc
Confidence 55554 45554 448999999999999999999998 486 5 889999987642 12367999999987742
Q ss_pred ------------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 ------------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 ------------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+.+.+.+.|||||+|++..++
T Consensus 332 ~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 332 RRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp TTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred CCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 123457889999999997753
No 110
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.82 E-value=2e-08 Score=82.89 Aligned_cols=86 Identities=20% Similarity=0.205 Sum_probs=67.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-------
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------- 74 (156)
|.+++.+... +.+|+++|+++.+++.|++|++.+ +. + ++++.+|+.+......+||.|+++.+.+.
T Consensus 245 G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~-~~-~---v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~ 317 (381)
T 3dmg_A 245 GALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN-AL-K---AQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILD 317 (381)
T ss_dssp STTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT-TC-C---CEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCH
T ss_pred CHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc-CC-C---eEEEEcchhhccccCCCeEEEEECCchhhcccccHH
Confidence 6666544443 369999999999999999999984 65 4 89999999876555578999999876653
Q ss_pred ----hHHHHHhhCCCCcEEEEEec
Q psy14971 75 ----VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 ----i~~~l~~~L~pGGrLv~~~~ 94 (156)
+...+.+.|+|||+|++...
T Consensus 318 ~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 318 VAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCcCcEEEEEEc
Confidence 22456789999999999764
No 111
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.81 E-value=6e-09 Score=82.21 Aligned_cols=91 Identities=20% Similarity=0.139 Sum_probs=66.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh---cCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCC----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN---IKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACI---- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~---~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~---- 73 (156)
|.++..+....+..+|+++|+++++++.|++++... +.-++ ++++.+|+.+.++. ..+||+|+++...+
T Consensus 87 G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~r---v~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~ 163 (275)
T 1iy9_A 87 GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPR---VDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPA 163 (275)
T ss_dssp CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTT---EEEEESCSHHHHHTCCSCEEEEEESCSSCCSCC
T ss_pred HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCc---eEEEECcHHHHHhhCCCCeeEEEECCCCCCCcc
Confidence 555554433334579999999999999999998641 12245 99999998653322 46799999988653
Q ss_pred ------chHHHHHhhCCCCcEEEEEecc
Q psy14971 74 ------EVPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ------~i~~~l~~~L~pGGrLv~~~~~ 95 (156)
++-+.+.+.|+|||++++....
T Consensus 164 ~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 164 VNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp CCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 2335678999999999997643
No 112
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.81 E-value=1.9e-08 Score=84.41 Aligned_cols=87 Identities=18% Similarity=0.121 Sum_probs=65.2
Q ss_pred CchHHHH-HHhcCCCCEEEEEeCCHHHHHHH-------HHHHhhhcC--CCCccceEEEEccCCC-CCC---CCCCcCEE
Q psy14971 1 MGDLNVI-VGIKGERALVLILNHYMKVKSKN-------QNNKKLNIK--QNRKSFKNVSVKDGSK-GHA---EEGPYDII 66 (156)
Q Consensus 1 ~G~la~l-a~l~g~~g~V~avD~~~~~~~~A-------~~~l~~~~g--~~n~~~v~~~~gD~~~-~~~---~~~~fD~I 66 (156)
.|.+++. |...+ ..+|+|+|+++++++.| ++|++. .| ..| ++++.+|... +++ ..++||+|
T Consensus 253 sG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~-~Gl~~~n---V~~i~gD~~~~~~~~~~~~~~FDvI 327 (433)
T 1u2z_A 253 VGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKL-YGMRLNN---VEFSLKKSFVDNNRVAELIPQCDVI 327 (433)
T ss_dssp TSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHH-TTBCCCC---EEEEESSCSTTCHHHHHHGGGCSEE
T ss_pred cCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHH-cCCCCCc---eEEEEcCccccccccccccCCCCEE
Confidence 4777765 44444 46899999999999999 889888 48 568 9999987653 221 14689999
Q ss_pred EEccCC--CchH---HHHHhhCCCCcEEEEE
Q psy14971 67 HLGAAC--IEVP---KEILAQLKPGGRLVFH 92 (156)
Q Consensus 67 ~i~~~~--~~i~---~~l~~~L~pGGrLv~~ 92 (156)
+++... ++++ ..+.++|||||+|++.
T Consensus 328 vvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 328 LVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp EECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred EEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 997544 2333 3678999999999997
No 113
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.80 E-value=3.9e-09 Score=75.78 Aligned_cols=89 Identities=11% Similarity=0.101 Sum_probs=66.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC----CCCcCEEEEccCCC----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE----EGPYDIIHLGAACI---- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~~---- 73 (156)
|.++..+...++ .|+++|+++++++.|++|++.. +. + ++++.+|+.+..+. ..+||.|+++.+..
T Consensus 53 G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~-~~-~---~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~~~~~ 125 (171)
T 1ws6_A 53 GAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRT-GL-G---ARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMDLA 125 (171)
T ss_dssp CHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHH-TC-C---CEEECSCHHHHHHHHHHTTCCEEEEEECCCTTSCTT
T ss_pred CHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHc-CC-c---eEEEeccHHHHHHhhhccCCceEEEEECCCCchhHH
Confidence 666655444454 4999999999999999999984 77 7 99999998653221 23799999996542
Q ss_pred chHHHHH--hhCCCCcEEEEEeccCC
Q psy14971 74 EVPKEIL--AQLKPGGRLVFHKGLHN 97 (156)
Q Consensus 74 ~i~~~l~--~~L~pGGrLv~~~~~~~ 97 (156)
.+.+.+. +.|+|||++++......
T Consensus 126 ~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 126 ALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred HHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 3334556 88999999999876543
No 114
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.80 E-value=4.7e-09 Score=76.56 Aligned_cols=90 Identities=13% Similarity=0.188 Sum_probs=65.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCC----CCCCcCEEEEccCCC--c
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHA----EEGPYDIIHLGAACI--E 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~----~~~~fD~I~i~~~~~--~ 74 (156)
|.+++.+... +..+|+++|+++++++.|++|++.. ++ ++ ++++.+|+.+..+ ...+||+|+++.+.. .
T Consensus 56 G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~---~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~ 130 (187)
T 2fhp_A 56 GGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAIT-KEPEK---FEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQE 130 (187)
T ss_dssp CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHH-TCGGG---EEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCC
T ss_pred CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHh-CCCcc---eEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchh
Confidence 6666533332 3479999999999999999999984 76 36 9999999865322 146899999987732 2
Q ss_pred hH---HHH--HhhCCCCcEEEEEeccC
Q psy14971 75 VP---KEI--LAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 75 i~---~~l--~~~L~pGGrLv~~~~~~ 96 (156)
.+ ..+ .+.|+|||++++.....
T Consensus 131 ~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 131 IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 22 234 56799999999987643
No 115
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.80 E-value=1e-08 Score=77.85 Aligned_cols=79 Identities=15% Similarity=0.077 Sum_probs=63.3
Q ss_pred cCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH--------HHHHh
Q psy14971 11 KGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP--------KEILA 81 (156)
Q Consensus 11 ~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~--------~~l~~ 81 (156)
..++.+|+++|+++++++.|++++.. .+. .+ ++++.+|+.+.. ...+||+|++......++ ..+.+
T Consensus 85 ~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~ 159 (235)
T 3lcc_A 85 ASPERFVVGLDISESALAKANETYGS-SPKAEY---FSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYE 159 (235)
T ss_dssp CBTTEEEEEECSCHHHHHHHHHHHTT-SGGGGG---EEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHH
T ss_pred HhCCCeEEEEECCHHHHHHHHHHhhc-cCCCcc---eEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHH
Confidence 34567999999999999999999976 232 45 999999998744 345899999988876554 35678
Q ss_pred hCCCCcEEEEEec
Q psy14971 82 QLKPGGRLVFHKG 94 (156)
Q Consensus 82 ~L~pGGrLv~~~~ 94 (156)
.|||||+|++..-
T Consensus 160 ~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 160 LLKPDGELITLMY 172 (235)
T ss_dssp HEEEEEEEEEEEC
T ss_pred HCCCCcEEEEEEe
Confidence 9999999998654
No 116
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.80 E-value=2.6e-08 Score=75.79 Aligned_cols=84 Identities=15% Similarity=0.076 Sum_probs=64.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC----CCCCCCCcCEEEEccCCC---
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK----GHAEEGPYDIIHLGAACI--- 73 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~----~~~~~~~fD~I~i~~~~~--- 73 (156)
|.++. ++...+ .++|+++|+++++++.|+++++. . +| +.++.+|+.+ .... ..||+|+.+...+
T Consensus 86 G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~-~--~~---v~~~~~d~~~~~~~~~~~-~~~D~v~~~~~~~~~~ 157 (230)
T 1fbn_A 86 GTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAE-R--EN---IIPILGDANKPQEYANIV-EKVDVIYEDVAQPNQA 157 (230)
T ss_dssp SHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTT-C--TT---EEEEECCTTCGGGGTTTS-CCEEEEEECCCSTTHH
T ss_pred CHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhc-C--CC---eEEEECCCCCcccccccC-ccEEEEEEecCChhHH
Confidence 66665 556656 68999999999999999999876 2 67 9999999876 2222 6799999765443
Q ss_pred -chHHHHHhhCCCCcEEEEEe
Q psy14971 74 -EVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 74 -~i~~~l~~~L~pGGrLv~~~ 93 (156)
.+...+.+.|+|||++++..
T Consensus 158 ~~~l~~~~~~LkpgG~l~i~~ 178 (230)
T 1fbn_A 158 EILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEE
Confidence 12456788999999999964
No 117
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.80 E-value=1.2e-08 Score=76.25 Aligned_cols=83 Identities=14% Similarity=0.209 Sum_probs=64.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++...... ..+|+++|+++++++.|++++.. . .+ ++++.+|+.+.. ..++||+|++.....+++
T Consensus 63 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-~--~~---~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~ 133 (216)
T 3ofk_A 63 GAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKR-W--SH---ISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQM 133 (216)
T ss_dssp SHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTT-C--SS---EEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHH
T ss_pred CHHHHHHHHc--CCEEEEEECCHHHHHHHHHhccc-C--CC---eEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHH
Confidence 5555433332 36999999999999999999876 2 36 999999998754 457899999998776554
Q ss_pred ----HHHHhhCCCCcEEEEEe
Q psy14971 77 ----KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ----~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|||||+|++..
T Consensus 134 ~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 134 RTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp HHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 24678999999999954
No 118
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.80 E-value=3.9e-09 Score=81.14 Aligned_cols=87 Identities=15% Similarity=0.037 Sum_probs=62.3
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCC-----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACI----- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~----- 73 (156)
+|..+.......+ .+|++||+++++++.|+++.+. .+ .+ ++++.+|+.+.. ....+||.|+.+....
T Consensus 71 ~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~-~~-~~---~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~ 144 (236)
T 3orh_A 71 MAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-QT-HK---VIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETW 144 (236)
T ss_dssp TSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGG-CS-SE---EEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGT
T ss_pred ccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhh-CC-Cc---eEEEeehHHhhcccccccCCceEEEeeeecccchh
Confidence 4666543322233 6899999999999999999987 34 35 899999975422 2346899999876432
Q ss_pred chH------HHHHhhCCCCcEEEEEe
Q psy14971 74 EVP------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 74 ~i~------~~l~~~L~pGGrLv~~~ 93 (156)
+++ +.+.+.|||||+|++..
T Consensus 145 ~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 145 HTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hhcchhhhhhhhhheeCCCCEEEEEe
Confidence 222 35688999999999854
No 119
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.79 E-value=2.1e-08 Score=76.83 Aligned_cols=76 Identities=16% Similarity=0.064 Sum_probs=61.4
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH------HHHHhhCCCCc
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP------KEILAQLKPGG 87 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~------~~l~~~L~pGG 87 (156)
..+|+++|+++++++.|++++.. +..+ ++++.+|+.+.....++||+|++....+.++ ..+.+.|||||
T Consensus 61 ~~~v~~vD~s~~~~~~a~~~~~~--~~~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 135 (263)
T 2yqz_A 61 GYRYIALDADAAMLEVFRQKIAG--VDRK---VQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGG 135 (263)
T ss_dssp TCEEEEEESCHHHHHHHHHHTTT--SCTT---EEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHhhc--cCCc---eEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCc
Confidence 47999999999999999999832 4467 9999999876433457899999998876653 35678999999
Q ss_pred EEEEEec
Q psy14971 88 RLVFHKG 94 (156)
Q Consensus 88 rLv~~~~ 94 (156)
++++...
T Consensus 136 ~l~~~~~ 142 (263)
T 2yqz_A 136 ALLEGWD 142 (263)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9998743
No 120
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.79 E-value=5.3e-09 Score=84.57 Aligned_cols=90 Identities=12% Similarity=0.048 Sum_probs=65.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCc-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIE----- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~----- 74 (156)
|.++.......+..+|+++|+++++++.||+++.. ....+ ++++.+|+.+... ..++||+|+++...+.
T Consensus 101 G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~-~~~~r---v~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~ 176 (317)
T 3gjy_A 101 CTMARYFADVYPQSRNTVVELDAELARLSREWFDI-PRAPR---VKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQN 176 (317)
T ss_dssp GHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC-CCTTT---EEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGG
T ss_pred CHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc-cCCCc---eEEEECcHHHHHhhccCCCCCEEEECCCCccccchh
Confidence 44554333324567999999999999999999865 23346 9999999875432 2468999999865431
Q ss_pred -----hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 -----VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 -----i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+-..+.+.|+|||+|++....
T Consensus 177 L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 177 FTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp GSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 124567899999999998863
No 121
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.79 E-value=5.2e-09 Score=76.09 Aligned_cols=90 Identities=13% Similarity=0.170 Sum_probs=66.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCC-CCCCcCEEEEccCCC-----c
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACI-----E 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~-----~ 74 (156)
|.+++.+... +..+|+++|+++++++.|++|++. .++. + ++++.+|+.+..+ ....||+|+++.+.. .
T Consensus 43 G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~---~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~~~~~~ 117 (177)
T 2esr_A 43 GGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIM-TKAENR---FTLLKMEAERAIDCLTGRFDLVFLDPPYAKETIVA 117 (177)
T ss_dssp CHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHT-TTCGGG---EEEECSCHHHHHHHBCSCEEEEEECCSSHHHHHHH
T ss_pred CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHH-cCCCCc---eEEEECcHHHhHHhhcCCCCEEEECCCCCcchHHH
Confidence 6666543333 347999999999999999999988 4764 5 9999999865322 235699999987652 1
Q ss_pred hHHHHH--hhCCCCcEEEEEeccC
Q psy14971 75 VPKEIL--AQLKPGGRLVFHKGLH 96 (156)
Q Consensus 75 i~~~l~--~~L~pGGrLv~~~~~~ 96 (156)
....+. +.|+|||++++.....
T Consensus 118 ~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 118 TIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHHhCCCcCCCcEEEEEECCc
Confidence 223444 7899999999987643
No 122
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.79 E-value=1.9e-09 Score=82.31 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=66.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK--- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~--- 77 (156)
|.+++.+...+ ++|+++|+++++++.|++|++. .++ ++ ++++++|+.+.. ...+||+|+++.+......
T Consensus 90 G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~-~~~~~~---~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~ 162 (241)
T 3gdh_A 90 GGNTIQFALTG--MRVIAIDIDPVKIALARNNAEV-YGIADK---IEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATA 162 (241)
T ss_dssp SHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH-TTCGGG---EEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGS
T ss_pred CHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHH-cCCCcC---eEEEECChHHhc-ccCCCCEEEECCCcCCcchhhh
Confidence 66665444433 8999999999999999999998 487 46 999999987643 4578999999988775442
Q ss_pred ---HHHhhCCCCcEEEEEe
Q psy14971 78 ---EILAQLKPGGRLVFHK 93 (156)
Q Consensus 78 ---~l~~~L~pGGrLv~~~ 93 (156)
.+.+.|+|||++++..
T Consensus 163 ~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 163 ETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SSBCTTTSCSSCHHHHHHH
T ss_pred HHHHHHhhcCCcceeHHHH
Confidence 3567899999977653
No 123
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.78 E-value=8.4e-09 Score=84.43 Aligned_cols=90 Identities=10% Similarity=0.013 Sum_probs=71.6
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC---CC-------------CCcC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA---EE-------------GPYD 64 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~---~~-------------~~fD 64 (156)
.|.+++.+.. ...+|+++|+++++++.|++|++.+ |++| ++++.+|+.+..+ .. ..||
T Consensus 224 ~G~~~l~la~--~~~~V~gvd~~~~ai~~a~~n~~~n-g~~~---v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD 297 (369)
T 3bt7_A 224 NGNFSLALAR--NFDRVLATEIAKPSVAAAQYNIAAN-HIDN---VQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCE 297 (369)
T ss_dssp TSHHHHHHGG--GSSEEEEECCCHHHHHHHHHHHHHT-TCCS---EEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEE
T ss_pred CCHHHHHHHh--cCCEEEEEECCHHHHHHHHHHHHHc-CCCc---eEEEECCHHHHHHHHhhccccccccccccccCCCC
Confidence 3677764433 2379999999999999999999985 8888 9999999865321 11 3799
Q ss_pred EEEEccCCCchHHHHHhhCCCCcEEEEEeccC
Q psy14971 65 IIHLGAACIEVPKEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 65 ~I~i~~~~~~i~~~l~~~L~pGGrLv~~~~~~ 96 (156)
+|+++.+...+.+.+.+.|+++|++++..+..
T Consensus 298 ~Vv~dPPr~g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 298 TIFVDPPRSGLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp EEEECCCTTCCCHHHHHHHTTSSEEEEEESCH
T ss_pred EEEECcCccccHHHHHHHHhCCCEEEEEECCH
Confidence 99999988777778888999999999987643
No 124
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.78 E-value=1.7e-08 Score=77.37 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=65.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......++ .+|+++|+++++++.|++++.. .+ ++++.+|+.+.....++||+|++......++
T Consensus 56 G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~----~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 127 (253)
T 3g5l_A 56 GWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTTS----PV---VCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDI 127 (253)
T ss_dssp CHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCCC----TT---EEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHH
T ss_pred CHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhcc----CC---eEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHH
Confidence 556654444443 3999999999999999988752 46 9999999876433357899999998876553
Q ss_pred -HHHHhhCCCCcEEEEEec
Q psy14971 77 -KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++.+.
T Consensus 128 l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 128 CKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEeC
Confidence 457889999999999743
No 125
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.78 E-value=9.5e-09 Score=83.30 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=66.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCC-ccceEEEEccCCCCCCC----CCCcCEEEEccCCC--
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNR-KSFKNVSVKDGSKGHAE----EGPYDIIHLGAACI-- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n-~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~~-- 73 (156)
.|.+++.+...+ .+|+++|+++++++.|++|++.+ ++++ + ++++++|+.+.... ...||+|+++.+.-
T Consensus 164 tG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~-gl~~~~--v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~ 238 (332)
T 2igt_A 164 TGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLA-GLEQAP--IRWICEDAMKFIQREERRGSTYDIILTDPPKFGR 238 (332)
T ss_dssp TCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHH-TCTTSC--EEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEE
T ss_pred cCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc-CCCccc--eEEEECcHHHHHHHHHhcCCCceEEEECCccccC
Confidence 366776655544 49999999999999999999985 7652 2 89999998653321 35799999976631
Q ss_pred --------------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 --------------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 --------------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+...+.+.|+|||++++...
T Consensus 239 ~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 239 GTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp CTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 122345789999999777654
No 126
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.78 E-value=4.8e-09 Score=80.07 Aligned_cols=86 Identities=14% Similarity=0.014 Sum_probs=62.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--CCCCCCcCEEEE-ccCC--Cc--
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--HAEEGPYDIIHL-GAAC--IE-- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--~~~~~~fD~I~i-~~~~--~~-- 74 (156)
|.++......++ .+|+++|++++|++.|+++.+. .+ .+ ++++.+|+.+. ....++||+|++ ..+. +.
T Consensus 72 G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~-~~-~~---v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~ 145 (236)
T 1zx0_A 72 AIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-QT-HK---VIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWH 145 (236)
T ss_dssp SHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGG-CS-SE---EEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTT
T ss_pred CHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHh-cC-CC---eEEEecCHHHhhcccCCCceEEEEECCcccchhhhh
Confidence 666654433332 4899999999999999999987 36 46 99999998654 123468999999 3332 11
Q ss_pred ------hHHHHHhhCCCCcEEEEEe
Q psy14971 75 ------VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 ------i~~~l~~~L~pGGrLv~~~ 93 (156)
+...+.+.|||||+|++..
T Consensus 146 ~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 146 THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1245689999999999864
No 127
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.78 E-value=9.6e-08 Score=70.60 Aligned_cols=87 Identities=10% Similarity=0.030 Sum_probs=64.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc------h
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------V 75 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------i 75 (156)
|.++...... +.+|+++|+++++++.|+++++.. +. + ++++.+|+.+.....++||.|++...... +
T Consensus 41 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~-~~-~---~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~ 113 (202)
T 2kw5_A 41 GRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEK-GV-K---ITTVQSNLADFDIVADAWEGIVSIFCHLPSSLRQQL 113 (202)
T ss_dssp THHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHH-TC-C---EEEECCBTTTBSCCTTTCSEEEEECCCCCHHHHHHH
T ss_pred CHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhc-CC-c---eEEEEcChhhcCCCcCCccEEEEEhhcCCHHHHHHH
Confidence 4555433332 469999999999999999999884 65 6 99999998764333568999998643221 1
Q ss_pred HHHHHhhCCCCcEEEEEecc
Q psy14971 76 PKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~~~~ 95 (156)
...+.+.|+|||++++....
T Consensus 114 l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 114 YPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp HHHHHTTCCSSEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEEec
Confidence 23567899999999998653
No 128
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.77 E-value=6.1e-10 Score=82.64 Aligned_cols=66 Identities=15% Similarity=0.130 Sum_probs=34.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC----CCCcCEEEEccCC
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE----EGPYDIIHLGAAC 72 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~ 72 (156)
|.++..+....+..+|+++|+++++++.|++|++.. +. + ++++.+|+.+..+. .++||+|+++.+.
T Consensus 42 G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~---~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 42 GCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF-GA-V---VDWAAADGIEWLIERAERGRPWHAIVSNPPY 111 (215)
T ss_dssp CHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBSEEEECCCC
T ss_pred hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh-CC-c---eEEEEcchHhhhhhhhhccCcccEEEECCCC
Confidence 666665545566689999999999999999999883 76 6 99999998763332 2789999997554
No 129
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.76 E-value=5e-09 Score=82.81 Aligned_cols=87 Identities=16% Similarity=0.142 Sum_probs=63.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc--C---------CCCccceEEEEccCCCCCCCCCCcCEEEEcc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNI--K---------QNRKSFKNVSVKDGSKGHAEEGPYDIIHLGA 70 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~--g---------~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~ 70 (156)
|.++..+... +..+|+++|+++++++.|++++ . + + .++ ++++.+|+.+.....++||+|+++.
T Consensus 87 G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~-~~~~l~~~~~~~~~~~---v~~~~~D~~~~l~~~~~fD~Ii~d~ 160 (281)
T 1mjf_A 87 GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-K-IDNGLLEAMLNGKHEK---AKLTIGDGFEFIKNNRGFDVIIADS 160 (281)
T ss_dssp SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-C-TTTTHHHHHHTTCCSS---EEEEESCHHHHHHHCCCEEEEEEEC
T ss_pred CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-h-hccccccccccCCCCc---EEEEECchHHHhcccCCeeEEEECC
Confidence 5555543333 5589999999999999999998 4 3 2 245 9999999854222146799999998
Q ss_pred CCC----------chHHHHHhhCCCCcEEEEEec
Q psy14971 71 ACI----------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 71 ~~~----------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
..+ .+-+.+.+.|+|||++++..+
T Consensus 161 ~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 161 TDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 742 123466889999999999754
No 130
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.76 E-value=3.3e-08 Score=74.28 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=66.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-----CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-----RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-----n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~ 76 (156)
|.++...... +.+|+++|+++++++.|+++++. .++. + ++++.+|+........+||+|++......++
T Consensus 42 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~---~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~ 115 (235)
T 3sm3_A 42 GKISLELASK--GYSVTGIDINSEAIRLAETAARS-PGLNQKTGGK---AEFKVENASSLSFHDSSFDFAVMQAFLTSVP 115 (235)
T ss_dssp SHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTC-CSCCSSSSCE---EEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHh-cCCccccCcc---eEEEEecccccCCCCCceeEEEEcchhhcCC
Confidence 5555443333 47999999999999999999987 3542 4 8999999876443457899999998776553
Q ss_pred ---------HHHHhhCCCCcEEEEEec
Q psy14971 77 ---------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---------~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||+|++...
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 116 DPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 346789999999999743
No 131
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.76 E-value=5.6e-09 Score=85.81 Aligned_cols=90 Identities=17% Similarity=0.211 Sum_probs=69.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC----CCCcCEEEEccCCCc--
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE----EGPYDIIHLGAACIE-- 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~~~-- 74 (156)
.|.+++.+... ..+|+++|+++++++.|++|++.+ +++| ++++.+|+.+..+. ..+||+|+++.+...
T Consensus 220 ~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n-~~~~---~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~ 293 (382)
T 1wxx_A 220 AGGFALHLALG--FREVVAVDSSAEALRRAEENARLN-GLGN---VRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKG 293 (382)
T ss_dssp TTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHT-TCTT---EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCS
T ss_pred cCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc-CCCC---ceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCC
Confidence 36666644333 479999999999999999999985 8888 99999998654331 468999999876521
Q ss_pred -------------hHHHHHhhCCCCcEEEEEeccC
Q psy14971 75 -------------VPKEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 75 -------------i~~~l~~~L~pGGrLv~~~~~~ 96 (156)
+...+.+.|+|||+|++.....
T Consensus 294 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 294 KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 2235678999999999987643
No 132
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.76 E-value=1.7e-08 Score=74.81 Aligned_cols=87 Identities=17% Similarity=0.090 Sum_probs=64.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-------
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------- 74 (156)
|.++......++ .+|+++|+++.+++.|++++.. ..+ ++++.+|+.+.....++||+|++......
T Consensus 54 G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~---~~~---i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~ 126 (215)
T 2pxx_A 54 SALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH---VPQ---LRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERD 126 (215)
T ss_dssp CSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT---CTT---CEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSC
T ss_pred cHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc---CCC---cEEEEcchhcCCCCCCcccEEEECcchhhhcccccc
Confidence 555554433444 3899999999999999999865 246 99999998764333568999998765422
Q ss_pred --------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 --------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 --------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+...+.+.|+|||++++....
T Consensus 127 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 127 PWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 223567899999999997653
No 133
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.76 E-value=8.9e-09 Score=82.05 Aligned_cols=91 Identities=13% Similarity=0.070 Sum_probs=63.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhh--h-cCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCC----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKL--N-IKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACI---- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~--~-~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~---- 73 (156)
|.++..+....+..+|+++|+++++++.|++++.. . ++.++ ++++.+|+.+..+ ....||+|+++...+
T Consensus 102 G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~---v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~ 178 (296)
T 1inl_A 102 GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPR---AEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQ 178 (296)
T ss_dssp CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTT---EEEEESCHHHHGGGCSSCEEEEEEEC-------
T ss_pred CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCc---eEEEECcHHHHHhhCCCCceEEEEcCCCcccCc
Confidence 55554433333458999999999999999999854 1 22356 9999999865332 246799999987544
Q ss_pred -------chHHHHHhhCCCCcEEEEEecc
Q psy14971 74 -------EVPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 -------~i~~~l~~~L~pGGrLv~~~~~ 95 (156)
.+-+.+.+.|+|||+|++..+.
T Consensus 179 ~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 179 GGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp ---CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred hhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 1224678899999999997653
No 134
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.75 E-value=4.1e-08 Score=74.67 Aligned_cols=87 Identities=18% Similarity=0.150 Sum_probs=67.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--C-CCCCcCEEEEccCCCch--
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--A-EEGPYDIIHLGAACIEV-- 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~-~~~~fD~I~i~~~~~~i-- 75 (156)
|.++. ++...++.++|+++|+++++++.+.++.+. . .| ++++.+|+.+.. + ..++||+|+++.+.+..
T Consensus 89 G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-~--~~---v~~~~~d~~~~~~~~~~~~~~D~V~~~~~~~~~~~ 162 (233)
T 2ipx_A 89 GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-R--TN---IIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTR 162 (233)
T ss_dssp SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-C--TT---EEEECSCTTCGGGGGGGCCCEEEEEECCCCTTHHH
T ss_pred CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-c--CC---eEEEEcccCChhhhcccCCcEEEEEEcCCCccHHH
Confidence 56664 667777778999999999999988888876 2 57 999999987632 2 24689999998774432
Q ss_pred --HHHHHhhCCCCcEEEEEec
Q psy14971 76 --PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 --~~~l~~~L~pGGrLv~~~~ 94 (156)
...+.+.|||||++++.+.
T Consensus 163 ~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 163 IVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEEc
Confidence 2357789999999999654
No 135
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.75 E-value=3.4e-08 Score=73.48 Aligned_cols=84 Identities=13% Similarity=0.129 Sum_probs=65.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|.++...... +.+|+++|+++++++.|++ . +..+ ++++.+|+.+. ...++||+|++....+++++
T Consensus 58 G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~---~--~~~~---~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~ 126 (218)
T 3ou2_A 58 GYWTRHLSGL--ADRVTALDGSAEMIAEAGR---H--GLDN---VEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFE 126 (218)
T ss_dssp SHHHHHHHHH--SSEEEEEESCHHHHHHHGG---G--CCTT---EEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHH
T ss_pred CHHHHHHHhc--CCeEEEEeCCHHHHHHHHh---c--CCCC---eEEEecccccC-CCCCceeEEEEechhhcCCHHHHH
Confidence 5555433222 4799999999999999997 2 5567 99999999876 44678999999998876653
Q ss_pred ----HHHhhCCCCcEEEEEeccC
Q psy14971 78 ----EILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 78 ----~l~~~L~pGGrLv~~~~~~ 96 (156)
.+.+.|+|||++++.....
T Consensus 127 ~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 127 AFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHcCCCeEEEEEeCCC
Confidence 4578999999999987543
No 136
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.75 E-value=2.5e-08 Score=76.31 Aligned_cols=82 Identities=16% Similarity=0.166 Sum_probs=64.4
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++.. +... +.++|+++|+++++++.|+++. .+ ++++.+|+.+.. ...+||.|++......++
T Consensus 45 G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~------~~---~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~ 113 (259)
T 2p35_A 45 GNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL------PN---TNFGKADLATWK-PAQKADLLYANAVFQWVPDHLA 113 (259)
T ss_dssp THHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS------TT---SEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHH
T ss_pred CHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC------CC---cEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHH
Confidence 566654 4343 5689999999999999999872 35 899999987643 557899999998877654
Q ss_pred --HHHHhhCCCCcEEEEEec
Q psy14971 77 --KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||+|++...
T Consensus 114 ~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 114 VLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp HHHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEeC
Confidence 356789999999999764
No 137
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.75 E-value=2.8e-08 Score=73.71 Aligned_cols=78 Identities=18% Similarity=0.072 Sum_probs=62.6
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH--------HHHHhhCC
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP--------KEILAQLK 84 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~--------~~l~~~L~ 84 (156)
++.+|+++|+++++++.|+++++.. + .+ ++++.+|+.+.....++||+|++.....+++ ..+.+.||
T Consensus 45 ~~~~v~~vD~s~~~~~~a~~~~~~~-~-~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 119 (209)
T 2p8j_A 45 DGYKTYGIEISDLQLKKAENFSREN-N-FK---LNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLK 119 (209)
T ss_dssp TTCEEEEEECCHHHHHHHHHHHHHH-T-CC---CCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEE
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhc-C-Cc---eEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcC
Confidence 3479999999999999999999873 5 46 8999999876433357899999987766652 35678999
Q ss_pred CCcEEEEEecc
Q psy14971 85 PGGRLVFHKGL 95 (156)
Q Consensus 85 pGGrLv~~~~~ 95 (156)
|||++++....
T Consensus 120 pgG~l~~~~~~ 130 (209)
T 2p8j_A 120 PGGLACINFLT 130 (209)
T ss_dssp EEEEEEEEEEE
T ss_pred CCcEEEEEEec
Confidence 99999997653
No 138
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.74 E-value=6.3e-09 Score=84.55 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=64.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc--CC--CCccceEEEEccCCCCCC--CCCCcCEEEEccCCC--
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNI--KQ--NRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACI-- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~--g~--~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~-- 73 (156)
|.++.......+..+|+++|+++++++.|++++.. + ++ .+ ++++.+|+.+..+ ..++||+|+++...+
T Consensus 132 G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~-~~~gl~~~r---v~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~ 207 (334)
T 1xj5_A 132 GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPD-VAIGYEDPR---VNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIG 207 (334)
T ss_dssp SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHH-HHGGGGSTT---EEEEESCHHHHHHTSCTTCEEEEEECCCCTTS
T ss_pred cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh-hccccCCCc---EEEEECCHHHHHHhccCCCccEEEECCCCccC
Confidence 55554433334568999999999999999999875 2 22 46 9999999865322 236799999987632
Q ss_pred --------chHHHHHhhCCCCcEEEEEe
Q psy14971 74 --------EVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 74 --------~i~~~l~~~L~pGGrLv~~~ 93 (156)
.+-+.+.+.|+|||+|++..
T Consensus 208 ~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 208 PAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp GGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 22346788999999999964
No 139
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.74 E-value=1.1e-07 Score=76.15 Aligned_cols=88 Identities=13% Similarity=-0.028 Sum_probs=68.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|.++.......|..+++++|+ +++++.|++++.. .++.++ ++++.+|..+..+. +||+|++....+..++
T Consensus 181 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~p~--~~D~v~~~~vlh~~~~~~~~ 254 (332)
T 3i53_A 181 GGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLD-TGLSGR--AQVVVGSFFDPLPA--GAGGYVLSAVLHDWDDLSAV 254 (332)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH-TTCTTT--EEEEECCTTSCCCC--SCSEEEEESCGGGSCHHHHH
T ss_pred hHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhh-cCcCcC--eEEecCCCCCCCCC--CCcEEEEehhhccCCHHHHH
Confidence 555543333346689999999 9999999999988 476333 99999999755543 7999999988876553
Q ss_pred ----HHHhhCCCCcEEEEEecc
Q psy14971 78 ----EILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 78 ----~l~~~L~pGGrLv~~~~~ 95 (156)
.+.+.|+|||+|++....
T Consensus 255 ~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 255 AILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp HHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHhcCCCCEEEEEeec
Confidence 467899999999997653
No 140
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.74 E-value=9.6e-08 Score=74.49 Aligned_cols=84 Identities=17% Similarity=0.018 Sum_probs=65.9
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++. +++..+ .+|+++|+++++++.|+++++. .+.. + ++++.+|..+ ++ ++||+|++.....+++
T Consensus 76 G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~-~~~~~~---~~~~~~d~~~-~~--~~fD~v~~~~~l~~~~~~~ 146 (287)
T 1kpg_A 76 GATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVAN-SENLRS---KRVLLAGWEQ-FD--EPVDRIVSIGAFEHFGHER 146 (287)
T ss_dssp SHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHT-CCCCSC---EEEEESCGGG-CC--CCCSEEEEESCGGGTCTTT
T ss_pred cHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHh-cCCCCC---eEEEECChhh-CC--CCeeEEEEeCchhhcChHH
Confidence 55554 443444 5999999999999999999987 4764 5 9999999864 33 7899999998776552
Q ss_pred -----HHHHhhCCCCcEEEEEec
Q psy14971 77 -----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 147 ~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 147 YDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEe
Confidence 356789999999999764
No 141
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.73 E-value=9.2e-09 Score=82.39 Aligned_cols=90 Identities=14% Similarity=0.034 Sum_probs=64.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhh--h-cCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCc---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKL--N-IKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIE--- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~--~-~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~--- 74 (156)
|.++.......+..+|+++|+++++++.|++++.. . +..++ ++++.+|+.+.++ ..++||+|+++...+.
T Consensus 107 G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~r---v~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~ 183 (304)
T 2o07_A 107 GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSK---LTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPA 183 (304)
T ss_dssp SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTT---EEEEESCHHHHHHTCSSCEEEEEEECC------
T ss_pred hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCc---EEEEECcHHHHHhhCCCCceEEEECCCCCCCcc
Confidence 55554433334568999999999999999999865 1 12246 9999999865222 2467999999886532
Q ss_pred -------hHHHHHhhCCCCcEEEEEec
Q psy14971 75 -------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 -------i~~~l~~~L~pGGrLv~~~~ 94 (156)
+-+.+.+.|+|||+|++...
T Consensus 184 ~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 184 ESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp -----CHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 23467899999999999763
No 142
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.73 E-value=2e-08 Score=75.87 Aligned_cols=83 Identities=19% Similarity=0.063 Sum_probs=64.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......+ .+|+++|+++++++.|++++.. + ++++.+|+.+. ...++||+|++....++++
T Consensus 54 G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~-----~---v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~~ 122 (250)
T 2p7i_A 54 GDFTSRLQEHF--NDITCVEASEEAISHAQGRLKD-----G---ITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVAL 122 (250)
T ss_dssp SHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCS-----C---EEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHHH
T ss_pred CHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhC-----C---eEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHHH
Confidence 45554333333 5899999999999999988642 5 99999998765 3457899999999887654
Q ss_pred -HHHH-hhCCCCcEEEEEecc
Q psy14971 77 -KEIL-AQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 -~~l~-~~L~pGGrLv~~~~~ 95 (156)
..+. +.|||||+|++....
T Consensus 123 l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 123 LKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp HHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEEcCC
Confidence 3568 899999999998743
No 143
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.72 E-value=1.4e-08 Score=83.78 Aligned_cols=91 Identities=15% Similarity=0.158 Sum_probs=68.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC--CccceEEEEccCCCCCCC----CCCcCEEEEccCCC-
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN--RKSFKNVSVKDGSKGHAE----EGPYDIIHLGAACI- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~--n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~~- 73 (156)
.|.+++.+...+ ..+|+++|+++++++.|++|++.+ +++ | ++++.+|+.+.++. ..+||+|+++.+..
T Consensus 223 tG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n-~~~~~~---v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~ 297 (385)
T 2b78_A 223 TAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEAN-HLDMAN---HQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFA 297 (385)
T ss_dssp TTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHT-TCCCTT---EEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-
T ss_pred cCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc-CCCccc---eEEEECCHHHHHHHHHHhCCCccEEEECCCCCC
Confidence 366776554433 259999999999999999999985 876 7 99999998653321 35799999987652
Q ss_pred ----chH----------HHHHhhCCCCcEEEEEeccC
Q psy14971 74 ----EVP----------KEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 74 ----~i~----------~~l~~~L~pGGrLv~~~~~~ 96 (156)
... ..+.+.|+|||+|++.....
T Consensus 298 ~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 298 RNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp ----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 111 23468999999999987643
No 144
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.72 E-value=6.7e-08 Score=72.27 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=63.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++...... +.+|+++|+++++++.|++++. .+ ++++.+|+.+.... ++||+|++......++
T Consensus 57 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-----~~---~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~ 125 (220)
T 3hnr_A 57 GNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP-----KE---FSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKN 125 (220)
T ss_dssp SHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC-----TT---CCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHH
T ss_pred CHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC-----Cc---eEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHH
Confidence 5555433222 4799999999999999998864 35 88999998774333 7899999998887654
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 126 ~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 126 VAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp HHHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEec
Confidence 346789999999999753
No 145
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.71 E-value=1e-07 Score=75.59 Aligned_cols=86 Identities=19% Similarity=0.125 Sum_probs=66.6
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++. ++...+ .+|+++|+++++++.|+++++. .++.++ ++++.+|..+. + ++||+|++.....+++
T Consensus 102 G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~-~--~~fD~v~~~~~l~~~~~~~~ 173 (318)
T 2fk8_A 102 GTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLAS-IDTNRS--RQVLLQGWEDF-A--EPVDRIVSIEAFEHFGHENY 173 (318)
T ss_dssp SHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHT-SCCSSC--EEEEESCGGGC-C--CCCSEEEEESCGGGTCGGGH
T ss_pred hHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHh-cCCCCc--eEEEECChHHC-C--CCcCEEEEeChHHhcCHHHH
Confidence 55554 444443 6999999999999999999988 476433 99999998653 3 6899999998776552
Q ss_pred ----HHHHhhCCCCcEEEEEecc
Q psy14971 77 ----KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 ----~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|||||++++....
T Consensus 174 ~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 174 DDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEEec
Confidence 3567899999999997653
No 146
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.71 E-value=4.7e-08 Score=79.05 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=67.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCC--chHHH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI--EVPKE 78 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~--~i~~~ 78 (156)
|.+++. .. ...+|+++|+++++++.|++|++.+ ++ ++ ++++.+|+.+.. ..||+|+++.+.. .+.+.
T Consensus 207 G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n-~l~~~---v~~~~~D~~~~~---~~fD~Vi~dpP~~~~~~l~~ 276 (336)
T 2yx1_A 207 GPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLN-KLEHK---IIPILSDVREVD---VKGNRVIMNLPKFAHKFIDK 276 (336)
T ss_dssp SHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHT-TCTTT---EEEEESCGGGCC---CCEEEEEECCTTTGGGGHHH
T ss_pred CHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHc-CCCCc---EEEEECChHHhc---CCCcEEEECCcHhHHHHHHH
Confidence 666665 33 3589999999999999999999985 77 46 999999987654 6899999985432 45567
Q ss_pred HHhhCCCCcEEEEEecc
Q psy14971 79 ILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 79 l~~~L~pGGrLv~~~~~ 95 (156)
+.+.|+|||+|++....
T Consensus 277 ~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 277 ALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp HHHHEEEEEEEEEEEEE
T ss_pred HHHHcCCCCEEEEEEee
Confidence 88999999999987543
No 147
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.71 E-value=1.4e-07 Score=76.73 Aligned_cols=89 Identities=4% Similarity=-0.024 Sum_probs=67.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC-CCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH-AEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~-~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++.......|..+|+++|+ +++++.|+++++. .++.++ ++++.+|..+.. +-...||+|++....+..+
T Consensus 191 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~ 266 (363)
T 3dp7_A 191 GKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAG-LSGSER--IHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEV 266 (363)
T ss_dssp CHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTT-CTTGGG--EEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHH
T ss_pred CHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHh-cCcccc--eEEEEccccccCCCCCCCcCEEEEechhhhCCHHHH
Confidence 566654333356789999999 9999999999987 466333 999999988642 1126799999999887554
Q ss_pred ----HHHHhhCCCCcEEEEEec
Q psy14971 77 ----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 267 ~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 267 ISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp HHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEee
Confidence 246788999999998653
No 148
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.70 E-value=2.4e-08 Score=76.22 Aligned_cols=85 Identities=14% Similarity=0.167 Sum_probs=65.5
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++.. +... ..+|+++|+++.+++.|++++.. . .+ ++++.+|..+.....++||+|++.....+++
T Consensus 105 G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-~--~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 176 (254)
T 1xtp_A 105 GRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG-M--PV---GKFILASMETATLPPNTYDLIVIQWTAIYLTDADF 176 (254)
T ss_dssp THHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT-S--SE---EEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHH
T ss_pred CHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc-C--Cc---eEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHH
Confidence 555543 3332 46899999999999999999876 2 46 9999999876433456899999999877763
Q ss_pred ----HHHHhhCCCCcEEEEEec
Q psy14971 77 ----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 177 ~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 177 VKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEec
Confidence 246789999999999764
No 149
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.70 E-value=1.1e-08 Score=84.27 Aligned_cols=91 Identities=18% Similarity=0.137 Sum_probs=69.3
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-C-CccceEEEEccCCCCCCC----CCCcCEEEEccCC--
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-N-RKSFKNVSVKDGSKGHAE----EGPYDIIHLGAAC-- 72 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~-n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~-- 72 (156)
.|.+++.+...| ..+|+++|+++++++.|++|++.+ ++ + | ++++.+|+.+..+. ...||+|+++.+.
T Consensus 231 ~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n-gl~~~~---v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~ 305 (396)
T 3c0k_A 231 TGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN-KLDLSK---AEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFV 305 (396)
T ss_dssp TCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT-TCCGGG---EEEEESCHHHHHHHHHHTTCCEEEEEECCSSTT
T ss_pred CCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc-CCCccc---eEEEECCHHHHHHHHHhcCCCCCEEEECCCCCC
Confidence 366776555544 469999999999999999999985 87 5 7 99999998664331 3579999999754
Q ss_pred ----------Cch---HHHHHhhCCCCcEEEEEeccC
Q psy14971 73 ----------IEV---PKEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 73 ----------~~i---~~~l~~~L~pGGrLv~~~~~~ 96 (156)
..+ ...+.+.|+|||+|++.....
T Consensus 306 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 306 ENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp TCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 122 235678999999999977643
No 150
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.70 E-value=1.3e-08 Score=83.77 Aligned_cols=91 Identities=22% Similarity=0.250 Sum_probs=68.7
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCC----CCCcCEEEEccCCCc-
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAE----EGPYDIIHLGAACIE- 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~~~- 74 (156)
.|.+++.+...| .++|+++|+++++++.|++|++.+ +++ | ++++.+|+.+..+. ..+||+|+++.+...
T Consensus 228 ~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n-~~~~~---v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~ 302 (396)
T 2as0_A 228 TGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLN-GVEDR---MKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQ 302 (396)
T ss_dssp TTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT-TCGGG---EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCS
T ss_pred CCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHc-CCCcc---ceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCC
Confidence 366666544433 469999999999999999999985 776 7 99999998653321 468999999876521
Q ss_pred --------------hHHHHHhhCCCCcEEEEEeccC
Q psy14971 75 --------------VPKEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 75 --------------i~~~l~~~L~pGGrLv~~~~~~ 96 (156)
+...+.+.|+|||+|++.....
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 303 HEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp SGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 1235678999999999987643
No 151
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.70 E-value=4.5e-08 Score=74.14 Aligned_cols=84 Identities=13% Similarity=-0.065 Sum_probs=64.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++...... +.+|+++|+++++++.|+++... .+ ++++.+|+.+.....++||+|++.....+++
T Consensus 65 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~----~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 135 (242)
T 3l8d_A 65 GYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEG----PD---LSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRA 135 (242)
T ss_dssp SHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCB----TT---EEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHHH
T ss_pred CHHHHHHHHc--CCeEEEEECCHHHHHHHHhhccc----CC---ceEEEcchhcCCCCCCCccEEEEcChHhhccCHHHH
Confidence 5555433332 46999999999999999987532 46 9999999876433467899999998887654
Q ss_pred -HHHHhhCCCCcEEEEEec
Q psy14971 77 -KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||++++...
T Consensus 136 l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 136 LNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCeEEEEEEc
Confidence 357889999999999763
No 152
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.70 E-value=6.8e-08 Score=75.23 Aligned_cols=89 Identities=13% Similarity=0.105 Sum_probs=66.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCC-CCCCcCEEEEccCCCc----h
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIE----V 75 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~----i 75 (156)
|.++..+...+ .++|+++|+++++++.|++++.. .+. .+ ++++.+|+.+... ..++||+|++....+. .
T Consensus 76 G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~ 150 (298)
T 1ri5_A 76 GGDLLKYERAG-IGEYYGVDIAEVSINDARVRARN-MKRRFK---VFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTS 150 (298)
T ss_dssp TTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHT-SCCSSE---EEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSH
T ss_pred CHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHh-cCCCcc---EEEEECCccccccCCCCCcCEEEECchhhhhcCCH
Confidence 44444332233 46999999999999999999987 465 35 9999999876422 3578999999887643 2
Q ss_pred H------HHHHhhCCCCcEEEEEecc
Q psy14971 76 P------KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 76 ~------~~l~~~L~pGGrLv~~~~~ 95 (156)
+ ..+.+.|+|||+|++....
T Consensus 151 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 151 ESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 2 3567899999999997754
No 153
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.70 E-value=1.8e-08 Score=83.57 Aligned_cols=88 Identities=16% Similarity=0.207 Sum_probs=65.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCC------
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACI------ 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~------ 73 (156)
.|.+++.+...| +.|+++|+++++++.|++|++.+ |+++ ++.++|+.+.+.. .+.||+|+++.+.-
T Consensus 225 tG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~n-g~~~----~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~ 297 (393)
T 4dmg_A 225 VGGFALRAARKG--AYALAVDKDLEALGVLDQAALRL-GLRV----DIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEE 297 (393)
T ss_dssp TTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH-TCCC----EEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGG
T ss_pred hhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHh-CCCC----cEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHH
Confidence 477777665555 45999999999999999999985 7653 5668998653321 23499999998761
Q ss_pred ---------chHHHHHhhCCCCcEEEEEecc
Q psy14971 74 ---------EVPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ---------~i~~~l~~~L~pGGrLv~~~~~ 95 (156)
.+...+.+.|+|||+|++....
T Consensus 298 ~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 298 LPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 2223557899999999976654
No 154
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.70 E-value=5.7e-08 Score=73.65 Aligned_cols=81 Identities=12% Similarity=0.104 Sum_probs=63.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-C-CCCcCEEEEccCCCchHHHH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-E-EGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~-~~~fD~I~i~~~~~~i~~~l 79 (156)
|.++...... +.+|+++|+++.+++.|+++. .+ ++++++|+.+.++ . .++||.|++......+...+
T Consensus 60 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------~~---~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~l~~~ 128 (226)
T 3m33_A 60 GPDAARFGPQ--AARWAAYDFSPELLKLARANA------PH---ADVYEWNGKGELPAGLGAPFGLIVSRRGPTSVILRL 128 (226)
T ss_dssp SHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC------TT---SEEEECCSCSSCCTTCCCCEEEEEEESCCSGGGGGH
T ss_pred CHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC------CC---ceEEEcchhhccCCcCCCCEEEEEeCCCHHHHHHHH
Confidence 5666543333 479999999999999999882 35 8999999965444 2 46899999997777777889
Q ss_pred HhhCCCCcEEEEEe
Q psy14971 80 LAQLKPGGRLVFHK 93 (156)
Q Consensus 80 ~~~L~pGGrLv~~~ 93 (156)
.+.|||||+|+.+.
T Consensus 129 ~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 129 PELAAPDAHFLYVG 142 (226)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEeC
Confidence 99999999999443
No 155
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.70 E-value=4.2e-08 Score=79.50 Aligned_cols=84 Identities=18% Similarity=0.114 Sum_probs=63.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccC---CC--c
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAA---CI--E 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~---~~--~ 74 (156)
.|.++..+...+ ..+|+++|+++ +++.|+++++.+ ++ ++ ++++.+|+.+...+.++||+|++... .. .
T Consensus 75 tG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~-~~~~~---i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~ 148 (340)
T 2fyt_A 75 TGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLN-KLEDT---ITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFES 148 (340)
T ss_dssp TSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHT-TCTTT---EEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTC
T ss_pred CcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHc-CCCCc---EEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHH
Confidence 377777655554 36999999996 999999999884 77 56 99999999764333468999998762 21 1
Q ss_pred ----hHHHHHhhCCCCcEEE
Q psy14971 75 ----VPKEILAQLKPGGRLV 90 (156)
Q Consensus 75 ----i~~~l~~~L~pGGrLv 90 (156)
+...+.+.|||||+++
T Consensus 149 ~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 149 MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp HHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHHhhcCCCcEEE
Confidence 1234568999999997
No 156
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.69 E-value=6.6e-08 Score=78.17 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=68.4
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc------
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------ 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------ 74 (156)
.|.++..+...++..+|+++|+++.+++.|+++++.+ +. + ++++.+|..+.. .++||.|+++.+.+.
T Consensus 207 ~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-~~-~---~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~ 279 (343)
T 2pjd_A 207 AGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-GV-E---GEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSL 279 (343)
T ss_dssp TSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-TC-C---CEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHH
T ss_pred cCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-CC-C---CEEEEccccccc--cCCeeEEEECCCcccCccCCH
Confidence 3677766555577789999999999999999999884 65 3 678999987643 468999999887653
Q ss_pred -----hHHHHHhhCCCCcEEEEEec
Q psy14971 75 -----VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 -----i~~~l~~~L~pGGrLv~~~~ 94 (156)
+...+.+.|||||+|++...
T Consensus 280 ~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 280 DAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 12356789999999999764
No 157
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.69 E-value=3.5e-08 Score=81.45 Aligned_cols=85 Identities=15% Similarity=0.108 Sum_probs=64.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccC---CC--ch
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAA---CI--EV 75 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~---~~--~i 75 (156)
+|.|+++|...|. .+|+|||.++ +++.|+++++.+ |+.++ |+++.+|..+... ..+||+|++... .. .+
T Consensus 94 tGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n-~~~~~--i~~i~~~~~~~~l-pe~~DvivsE~~~~~l~~e~~ 167 (376)
T 4hc4_A 94 TGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFN-GLEDR--VHVLPGPVETVEL-PEQVDAIVSEWMGYGLLHESM 167 (376)
T ss_dssp TSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHT-TCTTT--EEEEESCTTTCCC-SSCEEEEECCCCBTTBTTTCS
T ss_pred ccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHc-CCCce--EEEEeeeeeeecC-CccccEEEeecccccccccch
Confidence 5889999888775 6999999985 899999999986 87655 9999999876432 367999998432 11 12
Q ss_pred -H---HHHHhhCCCCcEEEE
Q psy14971 76 -P---KEILAQLKPGGRLVF 91 (156)
Q Consensus 76 -~---~~l~~~L~pGGrLv~ 91 (156)
+ ....+.|||||+++-
T Consensus 168 l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 168 LSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp HHHHHHHHHHHEEEEEEEES
T ss_pred hhhHHHHHHhhCCCCceECC
Confidence 2 344588999999864
No 158
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.69 E-value=1.2e-08 Score=82.28 Aligned_cols=89 Identities=13% Similarity=0.014 Sum_probs=64.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc--C--CCCccceEEEEccCCCCCC-CCCCcCEEEEccCCC---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNI--K--QNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACI--- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~--g--~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~--- 73 (156)
|.++.......+..+|+++|+++++++.|++++.. + + -++ ++++.+|+.+..+ ..++||+|+++...+
T Consensus 120 G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~-~~~~~~~~r---v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~ 195 (314)
T 2b2c_A 120 GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPG-MSCGFSHPK---LDLFCGDGFEFLKNHKNEFDVIITDSSDPVGP 195 (314)
T ss_dssp SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTT-TSGGGGCTT---EEEECSCHHHHHHHCTTCEEEEEECCC-----
T ss_pred CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHH-hccccCCCC---EEEEEChHHHHHHhcCCCceEEEEcCCCCCCc
Confidence 55555433334568999999999999999999875 2 2 245 9999999865322 246799999988532
Q ss_pred -------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 -------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 -------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+-+.+.+.|+|||+|++..+
T Consensus 196 ~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 196 AESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp --------HHHHHHHHEEEEEEEEEECC
T ss_pred chhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 233467889999999999764
No 159
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.69 E-value=6.6e-08 Score=74.77 Aligned_cols=89 Identities=12% Similarity=0.005 Sum_probs=65.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHH------HHHHHHHHHhhhcCC-CCccceEEEEcc-CCC-CCC-CCCCcCEEEEcc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMK------VKSKNQNNKKLNIKQ-NRKSFKNVSVKD-GSK-GHA-EEGPYDIIHLGA 70 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~------~~~~A~~~l~~~~g~-~n~~~v~~~~gD-~~~-~~~-~~~~fD~I~i~~ 70 (156)
|.++. ++...++.++|+++|++++ +++.|+++++. .++ ++ ++++.+| ... ..+ ..++||+|++..
T Consensus 55 G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~~~~~~~fD~v~~~~ 130 (275)
T 3bkx_A 55 GDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLA-GPLGDR---LTVHFNTNLSDDLGPIADQHFDRVVLAH 130 (275)
T ss_dssp SHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHT-STTGGG---EEEECSCCTTTCCGGGTTCCCSEEEEES
T ss_pred CHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHh-cCCCCc---eEEEECChhhhccCCCCCCCEEEEEEcc
Confidence 66665 4555677789999999997 99999999987 366 45 9999998 221 112 347899999998
Q ss_pred CCCchH------HHHHhhCCCCcEEEEEec
Q psy14971 71 ACIEVP------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 71 ~~~~i~------~~l~~~L~pGGrLv~~~~ 94 (156)
...+++ +.+..+++|||++++...
T Consensus 131 ~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 131 SLWYFASANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp CGGGSSCHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred chhhCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 876654 233455666999999653
No 160
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.69 E-value=2e-07 Score=75.95 Aligned_cols=87 Identities=14% Similarity=0.038 Sum_probs=67.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......|..+++++|+ +++++.|++++.. .++.++ |+++.+|..+..+. .||+|++....+..+
T Consensus 214 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-~~l~~~--v~~~~~d~~~~~p~--~~D~v~~~~vlh~~~d~~~~ 287 (369)
T 3gwz_A 214 GSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTG-RGLADR--CEILPGDFFETIPD--GADVYLIKHVLHDWDDDDVV 287 (369)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH-TTCTTT--EEEEECCTTTCCCS--SCSEEEEESCGGGSCHHHHH
T ss_pred cHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhh-cCcCCc--eEEeccCCCCCCCC--CceEEEhhhhhccCCHHHHH
Confidence 555653333356789999999 9999999999988 476433 99999999865553 799999998887554
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||+|++...
T Consensus 288 ~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 288 RILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp HHHHHHHTTCCTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEe
Confidence 346789999999999654
No 161
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.68 E-value=1.3e-08 Score=77.10 Aligned_cols=84 Identities=10% Similarity=0.058 Sum_probs=66.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK--- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~--- 77 (156)
|-+|+......|..+|+++|+++.|++.|++|++. .|.. | +++ .|..+. ...++||+|++.-..+.+.+
T Consensus 61 GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~-~g~~~~---v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~ 133 (200)
T 3fzg_A 61 NPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGK-LKTTIK---YRF--LNKESD-VYKGTYDVVFLLKMLPVLKQQDV 133 (200)
T ss_dssp HHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHH-SCCSSE---EEE--ECCHHH-HTTSEEEEEEEETCHHHHHHTTC
T ss_pred CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHh-cCCCcc---EEE--eccccc-CCCCCcChhhHhhHHHhhhhhHH
Confidence 56676666667888999999999999999999998 4876 4 666 665543 33478999999998887743
Q ss_pred ---HHHhhCCCCcEEEEE
Q psy14971 78 ---EILAQLKPGGRLVFH 92 (156)
Q Consensus 78 ---~l~~~L~pGGrLv~~ 92 (156)
.+.+.|+|||.+|-.
T Consensus 134 al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 134 NILDFLQLFHTQNFVISF 151 (200)
T ss_dssp CHHHHHHTCEEEEEEEEE
T ss_pred HHHHHHHHhCCCCEEEEe
Confidence 578999999888764
No 162
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.68 E-value=1.4e-08 Score=79.78 Aligned_cols=75 Identities=9% Similarity=-0.116 Sum_probs=60.2
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhh---cCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-hHHHHHhhCCCCcEEE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLN---IKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE-VPKEILAQLKPGGRLV 90 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~---~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~-i~~~l~~~L~pGGrLv 90 (156)
.+|+++|+++++++.|++++... +.-++ ++++.+|+.+.. ++||+|+++...+. ..+.+.+.|+|||+|+
T Consensus 95 ~~v~~veid~~~i~~ar~~~~~~~~~~~~~r---v~~~~~D~~~~~---~~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv 168 (262)
T 2cmg_A 95 THIDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDI---KKYDLIFCLQEPDIHRIDGLKRMLKEDGVFI 168 (262)
T ss_dssp CEEEEECSCHHHHGGGTTTSTTHHHHHTCTT---EEEESSGGGSCC---CCEEEEEESSCCCHHHHHHHHTTEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHhhccccCCCe---EEEEechHHHHH---hhCCEEEECCCChHHHHHHHHHhcCCCcEEE
Confidence 89999999999999999987541 22245 999999998754 68999999976543 3567889999999999
Q ss_pred EEecc
Q psy14971 91 FHKGL 95 (156)
Q Consensus 91 ~~~~~ 95 (156)
+..+.
T Consensus 169 ~~~~~ 173 (262)
T 2cmg_A 169 SVAKH 173 (262)
T ss_dssp EEEEC
T ss_pred EEcCC
Confidence 97653
No 163
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.68 E-value=4.7e-08 Score=73.96 Aligned_cols=85 Identities=21% Similarity=0.212 Sum_probs=64.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......+. .+|+++|+++++++.|++++.. .+ ++++.+|..+......+||+|++......++
T Consensus 55 G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~----~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 126 (243)
T 3bkw_A 55 GWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD----TG---ITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARL 126 (243)
T ss_dssp CHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS----SS---EEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHH
T ss_pred CHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc----CC---ceEEEcChhhccCCCCCceEEEEeccccccchHHHH
Confidence 555544333332 4999999999999999988754 36 9999999876433357899999998776543
Q ss_pred -HHHHhhCCCCcEEEEEec
Q psy14971 77 -KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||++++...
T Consensus 127 l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 127 FRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCcCcEEEEEeC
Confidence 456889999999999764
No 164
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.67 E-value=3.6e-08 Score=77.67 Aligned_cols=87 Identities=16% Similarity=0.143 Sum_probs=64.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC---CCccceEEEEccCCCCCCCCCCcCEEEEccC-CCchH-
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ---NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAA-CIEVP- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~---~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~-~~~i~- 76 (156)
|.++...... +.+|+++|+++++++.|++++.. .+. .+ ++++.+|+.+. +..++||.|++... ...++
T Consensus 94 G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~---v~~~~~d~~~~-~~~~~fD~v~~~~~~~~~~~~ 166 (299)
T 3g2m_A 94 GRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAE-APADVRDR---CTLVQGDMSAF-ALDKRFGTVVISSGSINELDE 166 (299)
T ss_dssp TTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHT-SCHHHHTT---EEEEECBTTBC-CCSCCEEEEEECHHHHTTSCH
T ss_pred CHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhh-cccccccc---eEEEeCchhcC-CcCCCcCEEEECCcccccCCH
Confidence 4445433222 47899999999999999999987 353 46 99999999873 33678999997533 32222
Q ss_pred -------HHHHhhCCCCcEEEEEecc
Q psy14971 77 -------KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 -------~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|||||+|++.+..
T Consensus 167 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 167 ADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 4567899999999997753
No 165
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.67 E-value=2e-08 Score=88.79 Aligned_cols=90 Identities=17% Similarity=0.263 Sum_probs=69.6
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC--CccceEEEEccCCCCCC-CCCCcCEEEEccCCC----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN--RKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACI---- 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~--n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~---- 73 (156)
.|.+++.+...| ..+|+++|+++.+++.|++|++.+ |++ + ++++++|+.+.++ ...+||+|+++.+.-
T Consensus 550 tG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~n-gl~~~~---v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~ 624 (703)
T 3v97_A 550 TGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLN-GLTGRA---HRLIQADCLAWLREANEQFDLIFIDPPTFSNSK 624 (703)
T ss_dssp TCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT-TCCSTT---EEEEESCHHHHHHHCCCCEEEEEECCCSBC---
T ss_pred hhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHc-CCCccc---eEEEecCHHHHHHhcCCCccEEEECCccccCCc
Confidence 477777665544 368999999999999999999985 775 6 9999999876332 246899999988641
Q ss_pred ------c-------hHHHHHhhCCCCcEEEEEecc
Q psy14971 74 ------E-------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ------~-------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
. +...+.+.|+|||+|++....
T Consensus 625 ~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 625 RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ----CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 1 123567899999999987765
No 166
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.67 E-value=7.1e-08 Score=78.33 Aligned_cols=86 Identities=15% Similarity=0.034 Sum_probs=63.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-----ch
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-----EV 75 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-----~i 75 (156)
.|.++..+...+ ..+|+++|++ ++++.|+++++.. ++.++ ++++.+|+.+.....++||+|++..... ..
T Consensus 77 ~G~~~~~la~~g-~~~v~gvD~s-~~l~~a~~~~~~~-~~~~~--v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~ 151 (349)
T 3q7e_A 77 TGILCMFAAKAG-ARKVIGIECS-SISDYAVKIVKAN-KLDHV--VTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESM 151 (349)
T ss_dssp TSHHHHHHHHTT-CSEEEEEECS-THHHHHHHHHHHT-TCTTT--EEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCC
T ss_pred chHHHHHHHHCC-CCEEEEECcH-HHHHHHHHHHHHc-CCCCc--EEEEECcHHHccCCCCceEEEEEccccccccCchh
Confidence 377776554443 4699999999 5999999999884 77655 9999999987533357899999965311 12
Q ss_pred H----HHHHhhCCCCcEEEE
Q psy14971 76 P----KEILAQLKPGGRLVF 91 (156)
Q Consensus 76 ~----~~l~~~L~pGGrLv~ 91 (156)
+ ..+.+.|||||+++.
T Consensus 152 ~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 152 LNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp HHHHHHHHHHHEEEEEEEES
T ss_pred HHHHHHHHHHhCCCCCEEcc
Confidence 2 345688999999974
No 167
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.67 E-value=3.2e-08 Score=73.29 Aligned_cols=83 Identities=7% Similarity=-0.049 Sum_probs=63.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++...... +.+|+++|+++++++.|+++. .+ ++++.+|+.+.....++||+|++......++
T Consensus 53 G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~------~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 121 (203)
T 3h2b_A 53 GRWTGHLASL--GHQIEGLEPATRLVELARQTH------PS---VTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELP 121 (203)
T ss_dssp CHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC------TT---SEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHH
T ss_pred CHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC------CC---CeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHH
Confidence 5555433332 369999999999999999873 25 8899999876333457899999998876653
Q ss_pred ---HHHHhhCCCCcEEEEEecc
Q psy14971 77 ---KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|+|||++++....
T Consensus 122 ~~l~~~~~~L~pgG~l~i~~~~ 143 (203)
T 3h2b_A 122 DALVALRMAVEDGGGLLMSFFS 143 (203)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEEEcc
Confidence 3567899999999998754
No 168
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.66 E-value=6.3e-08 Score=73.17 Aligned_cols=85 Identities=18% Similarity=0.202 Sum_probs=64.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEcc-CCCch---H-
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGA-ACIEV---P- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~-~~~~i---~- 76 (156)
|.++...... ..+|+++|+++++++.|++++.. .+. + ++++.+|..+.... .+||+|++.. ..+++ +
T Consensus 49 G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~-~~~-~---~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~ 120 (246)
T 1y8c_A 49 GNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRS-QGL-K---PRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDD 120 (246)
T ss_dssp STTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHH-TTC-C---CEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHH
T ss_pred CHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhh-cCC-C---eEEEecccccCCcc-CCceEEEEcCccccccCCHHH
Confidence 4444433222 36899999999999999999987 365 6 99999998764333 7899999987 76655 2
Q ss_pred -----HHHHhhCCCCcEEEEEec
Q psy14971 77 -----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||++++.+.
T Consensus 121 ~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 121 LKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEec
Confidence 246789999999998654
No 169
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.66 E-value=3.5e-08 Score=78.35 Aligned_cols=90 Identities=17% Similarity=0.107 Sum_probs=67.7
Q ss_pred hHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CC---CCCcC-----EEEEccC
Q psy14971 3 DLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AE---EGPYD-----IIHLGAA 71 (156)
Q Consensus 3 ~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~---~~~fD-----~I~i~~~ 71 (156)
.+.-+++.+.|.++|+++|.|+.|++.||+++... +..+ ++++.+|..+.. .. .+.|| .|++++.
T Consensus 94 ~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~-~~~~---~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~av 169 (277)
T 3giw_A 94 NLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST-PEGR---TAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAI 169 (277)
T ss_dssp CHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC-SSSE---EEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESC
T ss_pred HHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC-CCCc---EEEEEecccChhhhhcccccccccCcCCcchHHhhhh
Confidence 45556777778899999999999999999999762 4346 999999987631 10 23355 6888888
Q ss_pred CCchHH---------HHHhhCCCCcEEEEEeccC
Q psy14971 72 CIEVPK---------EILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 72 ~~~i~~---------~l~~~L~pGGrLv~~~~~~ 96 (156)
++.+++ .+.+.|+|||+|++.....
T Consensus 170 LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 170 VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred HhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 876653 4567899999999986543
No 170
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.66 E-value=2.3e-08 Score=77.00 Aligned_cols=90 Identities=11% Similarity=0.059 Sum_probs=61.7
Q ss_pred CchHHHHHHhc--CCCCEEEEEeCCHHHHHHHHHHHhhhc---CCCCc-----------------------cceE-----
Q psy14971 1 MGDLNVIVGIK--GERALVLILNHYMKVKSKNQNNKKLNI---KQNRK-----------------------SFKN----- 47 (156)
Q Consensus 1 ~G~la~la~l~--g~~g~V~avD~~~~~~~~A~~~l~~~~---g~~n~-----------------------~~v~----- 47 (156)
.|.+++.+... .+..+|+++|+++++++.|++|+.. . ++.++ ..++
T Consensus 62 sG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 140 (250)
T 1o9g_A 62 SGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLAL-LSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTA 140 (250)
T ss_dssp TSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHT-TSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHH-hhhccccccchhhhhhhhhcccccchhhhhhhhhhhhhccc
Confidence 36666544332 3457999999999999999998865 3 22110 0044
Q ss_pred --------EEEccCCCCCC-----CCCCcCEEEEccCCC---------------chHHHHHhhCCCCcEEEE
Q psy14971 48 --------VSVKDGSKGHA-----EEGPYDIIHLGAACI---------------EVPKEILAQLKPGGRLVF 91 (156)
Q Consensus 48 --------~~~gD~~~~~~-----~~~~fD~I~i~~~~~---------------~i~~~l~~~L~pGGrLv~ 91 (156)
++.+|..+..+ ...+||+|+++.+.. .+...+.+.|+|||+|++
T Consensus 141 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 141 EGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp TTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEE
Confidence 99999877542 334799999975421 223456789999999998
No 171
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.66 E-value=1.6e-08 Score=77.78 Aligned_cols=67 Identities=12% Similarity=-0.052 Sum_probs=49.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC----CCCC--CCCcCEEEEccCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK----GHAE--EGPYDIIHLGAAC 72 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~----~~~~--~~~fD~I~i~~~~ 72 (156)
|.+++ ++... +.++|+++|+++++++.|++|++.+ ++.++ ++++.+|+.+ ..+. ..+||.|+++.+.
T Consensus 77 G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~--v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~ 150 (254)
T 2h00_A 77 SCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQN-NLSDL--IKVVKVPQKTLLMDALKEESEIIYDFCMCNPPF 150 (254)
T ss_dssp TTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHT-TCTTT--EEEEECCTTCSSTTTSTTCCSCCBSEEEECCCC
T ss_pred hHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHc-CCCcc--EEEEEcchhhhhhhhhhcccCCcccEEEECCCC
Confidence 55554 34333 3489999999999999999999984 77544 9999999765 2222 2579999998543
No 172
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.65 E-value=1.7e-08 Score=79.86 Aligned_cols=89 Identities=22% Similarity=0.132 Sum_probs=64.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcC----CCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCc--
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIK----QNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIE-- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g----~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~-- 74 (156)
|.++..+....+..+|+++|+++++++.|++++.. ++ .++ ++++.+|+.+..+ ..+.||+|+++...+.
T Consensus 90 G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~-~~~~~~~~~---v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~ 165 (283)
T 2i7c_A 90 GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKN-ISCGYEDKR---VNVFIEDASKFLENVTNTYDVIIVDSSDPIGP 165 (283)
T ss_dssp SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTT-TSGGGGSTT---EEEEESCHHHHHHHCCSCEEEEEEECCCTTTG
T ss_pred CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHH-hccccCCCc---EEEEECChHHHHHhCCCCceEEEEcCCCCCCc
Confidence 44444333334568999999999999999999875 22 246 9999999865322 1467999999875432
Q ss_pred --------hHHHHHhhCCCCcEEEEEec
Q psy14971 75 --------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 --------i~~~l~~~L~pGGrLv~~~~ 94 (156)
+-+.+.+.|+|||+|++...
T Consensus 166 ~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 166 AETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp GGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred chhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 22456789999999999754
No 173
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.65 E-value=5.2e-08 Score=76.24 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=56.5
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----HHHHhhCCCCcE
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP-----KEILAQLKPGGR 88 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~-----~~l~~~L~pGGr 88 (156)
..+|+++|++++|++.|++ ..| ++++++|+.+.....++||.|++..+.+.++ ..+.+.|||||+
T Consensus 61 ~~~v~gvD~s~~ml~~a~~-------~~~---v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~ 130 (257)
T 4hg2_A 61 FERVHAVDPGEAQIRQALR-------HPR---VTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAV 130 (257)
T ss_dssp CSEEEEEESCHHHHHTCCC-------CTT---EEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEE
T ss_pred CCEEEEEeCcHHhhhhhhh-------cCC---ceeehhhhhhhcccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCE
Confidence 4799999999999987652 146 9999999976544568899999998887543 357889999999
Q ss_pred EEEEe
Q psy14971 89 LVFHK 93 (156)
Q Consensus 89 Lv~~~ 93 (156)
|++..
T Consensus 131 l~~~~ 135 (257)
T 4hg2_A 131 FAAVT 135 (257)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98864
No 174
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.65 E-value=7e-08 Score=80.74 Aligned_cols=89 Identities=17% Similarity=0.138 Sum_probs=62.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHh-------hhcCC--CCccceEEEEccCCCCCCCC--CCcCEEEEc
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKK-------LNIKQ--NRKSFKNVSVKDGSKGHAEE--GPYDIIHLG 69 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~-------~~~g~--~n~~~v~~~~gD~~~~~~~~--~~fD~I~i~ 69 (156)
.|.+++.+....+..+|+|||+++++++.|+++.+ . .|+ .+ |+|++||+.+..... ..||+||++
T Consensus 184 tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~-~Gl~~~r---Vefi~GD~~~lp~~d~~~~aDVVf~N 259 (438)
T 3uwp_A 184 VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKW-YGKKHAE---YTLERGDFLSEEWRERIANTSVIFVN 259 (438)
T ss_dssp TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHH-HTBCCCE---EEEEECCTTSHHHHHHHHTCSEEEEC
T ss_pred CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHH-hCCCCCC---eEEEECcccCCccccccCCccEEEEc
Confidence 36677654433334579999999999999998753 3 354 46 999999987632111 469999998
Q ss_pred cCCCc--hH---HHHHhhCCCCcEEEEEe
Q psy14971 70 AACIE--VP---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 70 ~~~~~--i~---~~l~~~L~pGGrLv~~~ 93 (156)
..+.. .. ..+.+.|||||+||+..
T Consensus 260 n~~F~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 260 NFAFGPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp CTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred ccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence 76421 11 24678999999999863
No 175
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.64 E-value=1.9e-07 Score=83.89 Aligned_cols=89 Identities=9% Similarity=-0.045 Sum_probs=68.7
Q ss_pred chHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHhhh-----cCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch
Q psy14971 2 GDLNVIVGIKG-ERALVLILNHYMKVKSKNQNNKKLN-----IKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~la~l~g-~~g~V~avD~~~~~~~~A~~~l~~~-----~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i 75 (156)
|.++......+ +..+|+++|+++++++.|+++++.. .+..+ ++++.+|+.+.....++||+|++.....++
T Consensus 733 G~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n---VefiqGDa~dLp~~d~sFDlVV~~eVLeHL 809 (950)
T 3htx_A 733 GSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS---ATLYDGSILEFDSRLHDVDIGTCLEVIEHM 809 (950)
T ss_dssp SHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE---EEEEESCTTSCCTTSCSCCEEEEESCGGGS
T ss_pred CHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc---eEEEECchHhCCcccCCeeEEEEeCchhhC
Confidence 66665444443 5579999999999999999987641 14556 999999998765556889999999998877
Q ss_pred HH--------HHHhhCCCCcEEEEEec
Q psy14971 76 PK--------EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 ~~--------~l~~~L~pGGrLv~~~~ 94 (156)
++ .+.+.|||| ++++...
T Consensus 810 ~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 810 EEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp CHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred ChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 63 457899999 7777654
No 176
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.64 E-value=1.5e-07 Score=76.26 Aligned_cols=86 Identities=15% Similarity=0.177 Sum_probs=67.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++.......+..+++++|+ +++++.|++++.. .++. + ++++.+|..+..+. .||+|++....++.+
T Consensus 194 G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~--~~D~v~~~~vl~~~~~~~~ 266 (374)
T 1qzz_A 194 GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFAD-AGLADR---VTVAEGDFFKPLPV--TADVVLLSFVLLNWSDEDA 266 (374)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH-TTCTTT---EEEEECCTTSCCSC--CEEEEEEESCGGGSCHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHh-cCCCCc---eEEEeCCCCCcCCC--CCCEEEEeccccCCCHHHH
Confidence 566654434456789999999 9999999999988 4765 5 99999998764443 499999998876554
Q ss_pred ----HHHHhhCCCCcEEEEEec
Q psy14971 77 ----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||+|++...
T Consensus 267 ~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 267 LTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEec
Confidence 346789999999998654
No 177
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.64 E-value=2e-08 Score=77.97 Aligned_cols=85 Identities=20% Similarity=0.176 Sum_probs=65.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch---HH
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV---PK 77 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i---~~ 77 (156)
.|.+++.+...++ +|+++|+++.+++.|++|++.+ ++ + ++++.+|..+..+ .++||.|+++...+.+ .+
T Consensus 131 ~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~-~~-~---v~~~~~d~~~~~~-~~~fD~Vv~n~~~~~~~~~l~ 202 (254)
T 2nxc_A 131 SGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRN-GV-R---PRFLEGSLEAALP-FGPFDLLVANLYAELHAALAP 202 (254)
T ss_dssp TSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHT-TC-C---CEEEESCHHHHGG-GCCEEEEEEECCHHHHHHHHH
T ss_pred CcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHc-CC-c---EEEEECChhhcCc-CCCCCEEEECCcHHHHHHHHH
Confidence 3777776666664 9999999999999999999884 64 3 7899999765433 4689999998654433 34
Q ss_pred HHHhhCCCCcEEEEEe
Q psy14971 78 EILAQLKPGGRLVFHK 93 (156)
Q Consensus 78 ~l~~~L~pGGrLv~~~ 93 (156)
.+.+.|+|||++++..
T Consensus 203 ~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 203 RYREALVPGGRALLTG 218 (254)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEEEe
Confidence 6788999999999953
No 178
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.63 E-value=1.3e-07 Score=73.05 Aligned_cols=83 Identities=13% Similarity=0.033 Sum_probs=62.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
|.++. ++... ++.+|+++|+++++++.|+++. .+ +.++.+|+.+.....++||.|++.... .....+.
T Consensus 97 G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~------~~---~~~~~~d~~~~~~~~~~fD~v~~~~~~-~~l~~~~ 165 (269)
T 1p91_A 97 GYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY------PQ---VTFCVASSHRLPFSDTSMDAIIRIYAP-CKAEELA 165 (269)
T ss_dssp STTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC------TT---SEEEECCTTSCSBCTTCEEEEEEESCC-CCHHHHH
T ss_pred CHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC------CC---cEEEEcchhhCCCCCCceeEEEEeCCh-hhHHHHH
Confidence 55554 34443 4579999999999999998764 24 789999987533345689999987654 4556889
Q ss_pred hhCCCCcEEEEEecc
Q psy14971 81 AQLKPGGRLVFHKGL 95 (156)
Q Consensus 81 ~~L~pGGrLv~~~~~ 95 (156)
+.|||||+|++....
T Consensus 166 ~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 166 RVVKPGGWVITATPG 180 (269)
T ss_dssp HHEEEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEEcC
Confidence 999999999998653
No 179
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.63 E-value=1e-07 Score=76.68 Aligned_cols=85 Identities=16% Similarity=0.048 Sum_probs=63.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-----ch
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-----EV 75 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-----~i 75 (156)
.|.++..+...+ ..+|+++|++ ++++.|+++++.+ ++.++ ++++.+|+.+......+||+|++..... ..
T Consensus 49 tG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~-~~~~~--i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~ 123 (328)
T 1g6q_1 49 TGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELN-GFSDK--ITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESM 123 (328)
T ss_dssp TSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHT-TCTTT--EEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCC
T ss_pred cHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHc-CCCCC--EEEEECchhhccCCCCcccEEEEeCchhhcccHHH
Confidence 377787665544 3699999999 6999999999884 77543 9999999876433346899999874321 12
Q ss_pred H----HHHHhhCCCCcEEE
Q psy14971 76 P----KEILAQLKPGGRLV 90 (156)
Q Consensus 76 ~----~~l~~~L~pGGrLv 90 (156)
+ ..+.+.|||||+++
T Consensus 124 ~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 124 MDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp HHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHhhcCCCeEEE
Confidence 2 34458999999997
No 180
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.63 E-value=3e-08 Score=81.78 Aligned_cols=89 Identities=16% Similarity=0.079 Sum_probs=67.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc---------------CCCCccceEEEEccCCCCCCC-CCCcC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNI---------------KQNRKSFKNVSVKDGSKGHAE-EGPYD 64 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~---------------g~~n~~~v~~~~gD~~~~~~~-~~~fD 64 (156)
.|.+++.+....+..+|+++|+++++++.|++|++. . ++++ ++++++|+.+.... ...||
T Consensus 58 tG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~-n~~~~~~~~~~~~~~~gl~~---i~v~~~Da~~~~~~~~~~fD 133 (378)
T 2dul_A 58 TGIRGIRFALETPAEEVWLNDISEDAYELMKRNVML-NFDGELRESKGRAILKGEKT---IVINHDDANRLMAERHRYFH 133 (378)
T ss_dssp TSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHH-HCCSCCEECSSEEEEESSSE---EEEEESCHHHHHHHSTTCEE
T ss_pred hhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH-hcccccccccccccccCCCc---eEEEcCcHHHHHHhccCCCC
Confidence 477887654433346899999999999999999998 5 6767 99999998653221 35799
Q ss_pred EEEEccCCC--chHHHHHhhCCCCcEEEEEe
Q psy14971 65 IIHLGAACI--EVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 65 ~I~i~~~~~--~i~~~l~~~L~pGGrLv~~~ 93 (156)
+|+++.... .+-+...+.|++||+|++..
T Consensus 134 ~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 134 FIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp EEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 999987543 44567788999999887754
No 181
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.63 E-value=1.1e-07 Score=74.17 Aligned_cols=82 Identities=26% Similarity=0.258 Sum_probs=62.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++..... +.++|+++|+++++++.|++++ .+ ++++.+|+.. ++..++||+|++......++
T Consensus 69 G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~---~~~~~~d~~~-~~~~~~fD~v~~~~~l~~~~d~~~~ 136 (279)
T 3ccf_A 69 GQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY------PH---LHFDVADARN-FRVDKPLDAVFSNAMLHWVKEPEAA 136 (279)
T ss_dssp SHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC------TT---SCEEECCTTT-CCCSSCEEEEEEESCGGGCSCHHHH
T ss_pred CHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC------CC---CEEEECChhh-CCcCCCcCEEEEcchhhhCcCHHHH
Confidence 555543322 5689999999999999998765 35 7899999876 33357899999998876543
Q ss_pred -HHHHhhCCCCcEEEEEecc
Q psy14971 77 -KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|||||+|++....
T Consensus 137 l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 137 IASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEecC
Confidence 4578899999999997653
No 182
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.62 E-value=3.2e-08 Score=79.41 Aligned_cols=90 Identities=14% Similarity=0.113 Sum_probs=65.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh-cC---CCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCc--
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN-IK---QNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIE-- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~-~g---~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~-- 74 (156)
|.++.......+..+|+++|+++++++.|++++... -+ .++ ++++.+|+.+..+ ..++||+|+++...+.
T Consensus 89 G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~---v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~ 165 (314)
T 1uir_A 89 GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPR---AVLVIDDARAYLERTEERYDVVIIDLTDPVGE 165 (314)
T ss_dssp SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTT---EEEEESCHHHHHHHCCCCEEEEEEECCCCBST
T ss_pred CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCc---eEEEEchHHHHHHhcCCCccEEEECCCCcccc
Confidence 444443333334679999999999999999998641 02 246 9999999865322 2467999999986644
Q ss_pred -h----------HHHHHhhCCCCcEEEEEec
Q psy14971 75 -V----------PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 -i----------~~~l~~~L~pGGrLv~~~~ 94 (156)
- -+.+.+.|+|||+|++..+
T Consensus 166 ~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 166 DNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp TCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 1 2456889999999999764
No 183
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.61 E-value=4.5e-08 Score=78.14 Aligned_cols=91 Identities=19% Similarity=0.159 Sum_probs=63.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh---cCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCch-
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN---IKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEV- 75 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~---~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i- 75 (156)
|.++..+....+..+|+++|+++++++.|++++... +...+ ++++.+|+.+... ..+.||+|+++...+..
T Consensus 107 G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~---v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~ 183 (304)
T 3bwc_A 107 GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPR---ATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGP 183 (304)
T ss_dssp SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTT---EEEEESCHHHHHHSSCTTCEEEEEEECC-----
T ss_pred CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCc---EEEEECcHHHHHHhccCCceeEEEECCCCcccc
Confidence 455543333344679999999999999999998431 12346 9999999865332 24689999998765432
Q ss_pred ---------HHHHHhhCCCCcEEEEEecc
Q psy14971 76 ---------PKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 76 ---------~~~l~~~L~pGGrLv~~~~~ 95 (156)
-..+.+.|||||+|++....
T Consensus 184 ~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 184 ASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp ----CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred chhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 24567899999999997643
No 184
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.61 E-value=1.4e-07 Score=71.30 Aligned_cols=74 Identities=16% Similarity=0.088 Sum_probs=58.6
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEcc-CCCch---------HHHHHhhCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGA-ACIEV---------PKEILAQLK 84 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~-~~~~i---------~~~l~~~L~ 84 (156)
.+|+++|+++++++.|++++.. .+ .+ ++++.+|+.+... ..+||+|++.. ....+ ...+.+.|+
T Consensus 55 ~~v~~vD~s~~~~~~a~~~~~~-~~-~~---~~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 128 (243)
T 3d2l_A 55 YEVTGVDLSEEMLEIAQEKAME-TN-RH---VDFWVQDMRELEL-PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLT 128 (243)
T ss_dssp SEEEEEESCHHHHHHHHHHHHH-TT-CC---CEEEECCGGGCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEE
T ss_pred CeEEEEECCHHHHHHHHHhhhh-cC-Cc---eEEEEcChhhcCC-CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcC
Confidence 7999999999999999999987 35 46 9999999876332 37899999976 44433 134678999
Q ss_pred CCcEEEEEec
Q psy14971 85 PGGRLVFHKG 94 (156)
Q Consensus 85 pGGrLv~~~~ 94 (156)
|||++++.+.
T Consensus 129 pgG~l~~~~~ 138 (243)
T 3d2l_A 129 DGGKLLFDVH 138 (243)
T ss_dssp EEEEEEEEEE
T ss_pred CCeEEEEEcC
Confidence 9999998653
No 185
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.60 E-value=1.2e-07 Score=70.61 Aligned_cols=71 Identities=15% Similarity=0.035 Sum_probs=58.0
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH------HHHHhhCCCCcEE
Q psy14971 16 LVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP------KEILAQLKPGGRL 89 (156)
Q Consensus 16 ~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~------~~l~~~L~pGGrL 89 (156)
+|+++|+++++++.|++++ .+ ++++.+|+.+.....++||+|++....++++ ..+.+.|||||++
T Consensus 58 ~v~~vD~s~~~~~~a~~~~------~~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l 128 (211)
T 2gs9_A 58 QKVGVEPSEAMLAVGRRRA------PE---ATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGAL 128 (211)
T ss_dssp EEEEECCCHHHHHHHHHHC------TT---SEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhC------CC---cEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999875 24 8899999876433456899999998877654 3567899999999
Q ss_pred EEEecc
Q psy14971 90 VFHKGL 95 (156)
Q Consensus 90 v~~~~~ 95 (156)
++....
T Consensus 129 ~i~~~~ 134 (211)
T 2gs9_A 129 VVGVLE 134 (211)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 997654
No 186
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.59 E-value=2.8e-08 Score=77.69 Aligned_cols=88 Identities=15% Similarity=0.143 Sum_probs=62.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh---cCCCCccceEEEEccCCCCC---CCCCCcCEEEEc-cCCCc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN---IKQNRKSFKNVSVKDGSKGH---AEEGPYDIIHLG-AACIE 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~---~g~~n~~~v~~~~gD~~~~~---~~~~~fD~I~i~-~~~~~ 74 (156)
|.++......+ .+|+++|+++++++.|++++... .+..+ +.+..+|..+.. ...++||+|++. ....+
T Consensus 69 G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~ 143 (293)
T 3thr_A 69 GVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDK---WVIEEANWLTLDKDVPAGDGFDAVICLGNSFAH 143 (293)
T ss_dssp SHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHT---CEEEECCGGGHHHHSCCTTCEEEEEECTTCGGG
T ss_pred CHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccce---eeEeecChhhCccccccCCCeEEEEEcChHHhh
Confidence 55555433333 59999999999999999987431 01235 889999976532 245789999997 45543
Q ss_pred hH-------------HHHHhhCCCCcEEEEEec
Q psy14971 75 VP-------------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 i~-------------~~l~~~L~pGGrLv~~~~ 94 (156)
++ ..+.+.|||||+|++...
T Consensus 144 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 144 LPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp SCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 32 356789999999998753
No 187
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.59 E-value=1.6e-07 Score=74.96 Aligned_cols=87 Identities=14% Similarity=0.065 Sum_probs=66.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......|..+++++|+ +++++.|++++... ++.++ ++++.+|..+..+ ..||+|++....++.+
T Consensus 179 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~--v~~~~~d~~~~~~--~~~D~v~~~~vl~~~~~~~~~ 252 (334)
T 2ip2_A 179 GELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL-LAGER--VSLVGGDMLQEVP--SNGDIYLLSRIIGDLDEAASL 252 (334)
T ss_dssp CHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH-HHTTS--EEEEESCTTTCCC--SSCSEEEEESCGGGCCHHHHH
T ss_pred hHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc-CCCCc--EEEecCCCCCCCC--CCCCEEEEchhccCCCHHHHH
Confidence 555544333346689999999 99999999998873 54332 9999999877443 5699999998876443
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||+|++...
T Consensus 253 ~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 253 RLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp HHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEEe
Confidence 356789999999999754
No 188
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.59 E-value=8.1e-08 Score=73.18 Aligned_cols=84 Identities=12% Similarity=0.029 Sum_probs=62.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-----CCCcCEEEEccCCCchH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-----EGPYDIIHLGAACIEVP 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-----~~~fD~I~i~~~~~~i~ 76 (156)
|.++......++ +|+++|+++.+++.|++++.. .+ ++++.+|+.+.... ..+||+|++....+.++
T Consensus 68 G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~----~~---~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~ 138 (245)
T 3ggd_A 68 GTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTA----AN---ISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIP 138 (245)
T ss_dssp SHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCC----TT---EEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSC
T ss_pred CHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcc----cC---ceEEECcccccccccccccccCccEEEEcchhhcCC
Confidence 566654333343 899999999999999998743 36 99999998763211 13599999998877655
Q ss_pred --------HHHHhhCCCCcEEEEEec
Q psy14971 77 --------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --------~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 139 ~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 139 VEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp GGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 356789999999887643
No 189
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.59 E-value=1.1e-07 Score=71.37 Aligned_cols=89 Identities=13% Similarity=0.037 Sum_probs=61.9
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHH----HHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCC----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKN----QNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAAC---- 72 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A----~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~---- 72 (156)
.|.++.......|.++|+++|++++|++.+ +++... .+.+| ++++++|+.+....... |.|++..+.
T Consensus 38 ~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~-~~~~~---v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~ 112 (218)
T 3mq2_A 38 DGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAK-GGLPN---LLYLWATAERLPPLSGV-GELHVLMPWGSLL 112 (218)
T ss_dssp TCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGG-TCCTT---EEEEECCSTTCCSCCCE-EEEEEESCCHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhh-cCCCc---eEEEecchhhCCCCCCC-CEEEEEccchhhh
Confidence 367776544456779999999999988753 334444 36678 99999999873333344 777754432
Q ss_pred -------CchHHHHHhhCCCCcEEEEEec
Q psy14971 73 -------IEVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 73 -------~~i~~~l~~~L~pGGrLv~~~~ 94 (156)
..+...+.+.|||||++++...
T Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 113 RGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp HHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 2233567899999999999764
No 190
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.58 E-value=3.5e-08 Score=79.59 Aligned_cols=90 Identities=21% Similarity=0.121 Sum_probs=64.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh---cCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCC----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN---IKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACI---- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~---~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~---- 73 (156)
|.++..+....+..+|+++|+++++++.|++++... +..++ ++++.+|+.+..+ ..++||+|+++...+
T Consensus 128 G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~---v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~ 204 (321)
T 2pt6_A 128 GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKR---VNVFIEDASKFLENVTNTYDVIIVDSSDPIGPA 204 (321)
T ss_dssp CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTT---EEEEESCHHHHHHHCCSCEEEEEEECCCSSSGG
T ss_pred cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCc---EEEEEccHHHHHhhcCCCceEEEECCcCCCCcc
Confidence 555544333334689999999999999999998751 11246 9999999865322 236799999987432
Q ss_pred ------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 ------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+-+.+.+.|+|||++++...
T Consensus 205 ~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 205 ETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp GGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 222466789999999999764
No 191
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.58 E-value=5.1e-07 Score=73.00 Aligned_cols=87 Identities=15% Similarity=0.052 Sum_probs=66.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|.++.......|..+|+++|+ +++++.|+++++. .++.++ ++++.+|..+... ..+|+|++....+..++
T Consensus 202 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~--~~~D~v~~~~vlh~~~d~~~~ 275 (359)
T 1x19_A 202 GDISAAMLKHFPELDSTILNL-PGAIDLVNENAAE-KGVADR--MRGIAVDIYKESY--PEADAVLFCRILYSANEQLST 275 (359)
T ss_dssp CHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHH-TTCTTT--EEEEECCTTTSCC--CCCSEEEEESCGGGSCHHHHH
T ss_pred cHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHh-cCCCCC--EEEEeCccccCCC--CCCCEEEEechhccCCHHHHH
Confidence 566654433456789999999 9999999999988 476544 9999999876422 23599999988776542
Q ss_pred ----HHHhhCCCCcEEEEEec
Q psy14971 78 ----EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 ----~l~~~L~pGGrLv~~~~ 94 (156)
.+.+.|+|||+|++...
T Consensus 276 ~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 276 IMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp HHHHHHHTTCCTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEec
Confidence 46789999999988653
No 192
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.58 E-value=2.3e-07 Score=70.77 Aligned_cols=85 Identities=14% Similarity=0.076 Sum_probs=62.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-c------
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-E------ 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-~------ 74 (156)
|.++...... +.+|+++|+++++++.|++++.. .+. + ++++.+|..+.. ...+||+|++..+.. .
T Consensus 53 G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~-~---v~~~~~d~~~~~-~~~~fD~v~~~~~~~~~~~~~~~ 124 (252)
T 1wzn_A 53 GIPTLELAER--GYEVVGLDLHEEMLRVARRKAKE-RNL-K---IEFLQGDVLEIA-FKNEFDAVTMFFSTIMYFDEEDL 124 (252)
T ss_dssp CHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-TTC-C---CEEEESCGGGCC-CCSCEEEEEECSSGGGGSCHHHH
T ss_pred CHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHh-cCC-c---eEEEECChhhcc-cCCCccEEEEcCCchhcCCHHHH
Confidence 5555433333 46999999999999999999987 364 6 999999987633 336799999864322 1
Q ss_pred --hHHHHHhhCCCCcEEEEEec
Q psy14971 75 --VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 --i~~~l~~~L~pGGrLv~~~~ 94 (156)
+...+.+.|+|||++++.+.
T Consensus 125 ~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 125 RKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEecc
Confidence 12356789999999998654
No 193
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.58 E-value=1.1e-07 Score=77.90 Aligned_cols=89 Identities=12% Similarity=0.048 Sum_probs=67.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCC------
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI------ 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~------ 73 (156)
.|.+++.+...++.++|+++|+++++++.|++|++.+ |+ ++ ++++++|+.+......+||+|+++.+..
T Consensus 228 sG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~-gl~~~---i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~ 303 (373)
T 3tm4_A 228 SGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA-GVLDK---IKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKK 303 (373)
T ss_dssp TCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT-TCGGG---CEEEECCGGGGGGTCSCEEEEEEECCCC------
T ss_pred CcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc-CCCCc---eEEEECChhhCCcccCCcCEEEECCCCCcccCcc
Confidence 4777777767776679999999999999999999984 87 45 9999999987443447899999987632
Q ss_pred -ch-------HHHHHhhCCCCcEEEEEecc
Q psy14971 74 -EV-------PKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 -~i-------~~~l~~~L~pGGrLv~~~~~ 95 (156)
.+ -+.+.+.| ||++++....
T Consensus 304 ~~~~~ly~~~~~~l~r~l--~g~~~~i~~~ 331 (373)
T 3tm4_A 304 SMIPDLYMKFFNELAKVL--EKRGVFITTE 331 (373)
T ss_dssp CCHHHHHHHHHHHHHHHE--EEEEEEEESC
T ss_pred hhHHHHHHHHHHHHHHHc--CCeEEEEECC
Confidence 11 12445556 7777776653
No 194
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.57 E-value=1.6e-07 Score=72.34 Aligned_cols=70 Identities=10% Similarity=0.011 Sum_probs=56.6
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEcc-CCCchH---------HHHHhhC
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGA-ACIEVP---------KEILAQL 83 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~-~~~~i~---------~~l~~~L 83 (156)
..+|+++|+++++++.|++++. + ++++.+|+.+... .++||+|++.. ....++ ..+.+.|
T Consensus 72 ~~~v~gvD~s~~~~~~a~~~~~------~---~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L 141 (263)
T 3pfg_A 72 FGTVEGLELSADMLAIARRRNP------D---AVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHV 141 (263)
T ss_dssp SSEEEEEESCHHHHHHHHHHCT------T---SEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTE
T ss_pred CCeEEEEECCHHHHHHHHhhCC------C---CEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhc
Confidence 4699999999999999998743 4 8899999876433 57899999987 665552 3567899
Q ss_pred CCCcEEEEEe
Q psy14971 84 KPGGRLVFHK 93 (156)
Q Consensus 84 ~pGGrLv~~~ 93 (156)
||||+|++..
T Consensus 142 ~pgG~l~i~~ 151 (263)
T 3pfg_A 142 LPDGVVVVEP 151 (263)
T ss_dssp EEEEEEEECC
T ss_pred CCCcEEEEEe
Confidence 9999999953
No 195
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.57 E-value=1.4e-07 Score=77.33 Aligned_cols=87 Identities=16% Similarity=0.037 Sum_probs=64.8
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-----ch
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-----EV 75 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-----~i 75 (156)
.|.+++.+...|. .+|+++|++ ++++.|+++++.+ ++.++ ++++.+|+.+.... ++||+|+++.... ..
T Consensus 74 tG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~-~~~~~--v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~ 147 (376)
T 3r0q_C 74 SGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKAN-NLDHI--VEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESM 147 (376)
T ss_dssp TTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHT-TCTTT--EEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCT
T ss_pred cCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHc-CCCCe--EEEEECchhhcCcC-CcceEEEEcChhhcccchHH
Confidence 4777776555553 599999999 9999999999984 77554 99999998764333 7899999965322 11
Q ss_pred H----HHHHhhCCCCcEEEEEe
Q psy14971 76 P----KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 ~----~~l~~~L~pGGrLv~~~ 93 (156)
+ ..+.+.|||||+|++..
T Consensus 148 ~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 148 FDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp HHHHHHHHHHHEEEEEEEESSE
T ss_pred HHHHHHHHHhhCCCCeEEEEec
Confidence 2 34568899999997643
No 196
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.57 E-value=6.3e-08 Score=74.08 Aligned_cols=87 Identities=7% Similarity=-0.035 Sum_probs=62.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCC-HHHHHHH---HHHHhhhcCCCCccceEEEEccCCCCCCC--CCCcCEEEEccCCCc-
Q psy14971 2 GDLNVIVGIKGERALVLILNHY-MKVKSKN---QNNKKLNIKQNRKSFKNVSVKDGSKGHAE--EGPYDIIHLGAACIE- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~-~~~~~~A---~~~l~~~~g~~n~~~v~~~~gD~~~~~~~--~~~fD~I~i~~~~~~- 74 (156)
|.++.......+.++|+++|++ +.|++.| +++.+. .++.| ++++.+|+... +. ...+|.|++..+.+.
T Consensus 36 G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~-~~~~~---v~~~~~d~~~l-~~~~~d~v~~i~~~~~~~~~ 110 (225)
T 3p2e_A 36 GRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSK-GGLSN---VVFVIAAAESL-PFELKNIADSISILFPWGTL 110 (225)
T ss_dssp SHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGG-TCCSS---EEEECCBTTBC-CGGGTTCEEEEEEESCCHHH
T ss_pred cHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHH-cCCCC---eEEEEcCHHHh-hhhccCeEEEEEEeCCCcHH
Confidence 5566544334677899999999 7777776 888877 48888 99999998764 32 255777777654322
Q ss_pred ----------hHHHHHhhCCCCcEEEEEe
Q psy14971 75 ----------VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 ----------i~~~l~~~L~pGGrLv~~~ 93 (156)
+...+.+.|||||++++..
T Consensus 111 ~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 111 LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 2346788999999999943
No 197
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.56 E-value=2.9e-07 Score=74.26 Aligned_cols=86 Identities=19% Similarity=0.229 Sum_probs=67.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEccCCCCCCCCCCcCEEEEccCCCchH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP---- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~---- 76 (156)
|.++.......+..+++++|+ +++++.|+++++. .++. + ++++.+|..+..+. .||+|++....++++
T Consensus 195 G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~---v~~~~~d~~~~~~~--~~D~v~~~~vl~~~~~~~~ 267 (360)
T 1tw3_A 195 GGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKD-EGLSDR---VDVVEGDFFEPLPR--KADAIILSFVLLNWPDHDA 267 (360)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHH-TTCTTT---EEEEECCTTSCCSS--CEEEEEEESCGGGSCHHHH
T ss_pred cHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHh-cCCCCc---eEEEeCCCCCCCCC--CccEEEEcccccCCCHHHH
Confidence 666654434456789999999 9999999999988 4765 5 99999998765543 499999988876544
Q ss_pred ----HHHHhhCCCCcEEEEEec
Q psy14971 77 ----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ----~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||+|++...
T Consensus 268 ~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 268 VRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEEE
Confidence 346789999999998653
No 198
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.56 E-value=2.4e-07 Score=73.73 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=66.0
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......|..+|+++|++ ++++.|++++... ++.++ ++++.+|..+... ...||+|++....+..+
T Consensus 177 G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~-~~~~~--v~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~ 251 (335)
T 2r3s_A 177 GLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ-GVASR--YHTIAGSAFEVDY-GNDYDLVLLPNFLHHFDVATCE 251 (335)
T ss_dssp CHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH-TCGGG--EEEEESCTTTSCC-CSCEEEEEEESCGGGSCHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc-CCCcc--eEEEecccccCCC-CCCCcEEEEcchhccCCHHHHH
Confidence 5555433333356899999999 9999999999884 76533 9999999876322 23499999988776653
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||++++...
T Consensus 252 ~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 252 QLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCCcEEEEEee
Confidence 346789999999998754
No 199
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.55 E-value=1.6e-07 Score=69.96 Aligned_cols=81 Identities=19% Similarity=0.094 Sum_probs=61.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++...... +.+|+++|+++++++.|++++ + ++++.+|..... ..++||+|++......++
T Consensus 55 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-------~---~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~ 121 (211)
T 3e23_A 55 GYQAEAMLAA--GFDVDATDGSPELAAEASRRL-------G---RPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELA 121 (211)
T ss_dssp SHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-------T---SCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHH
T ss_pred CHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc-------C---CceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHH
Confidence 5555433222 469999999999999999886 2 456778876543 567899999998887664
Q ss_pred ---HHHHhhCCCCcEEEEEecc
Q psy14971 77 ---KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|||||++++....
T Consensus 122 ~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 122 DVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEEEcC
Confidence 3567899999999998754
No 200
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.55 E-value=2.1e-07 Score=75.52 Aligned_cols=86 Identities=16% Similarity=0.092 Sum_probs=64.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCC-----c
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-----E 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-----~ 74 (156)
.|.++..+...+ ..+|+++|+++ +++.|+++++.+ ++ ++ ++++.+|..+. +..++||+|++..... .
T Consensus 61 tG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~-~l~~~---v~~~~~d~~~~-~~~~~~D~Ivs~~~~~~~~~~~ 133 (348)
T 2y1w_A 61 SGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSN-NLTDR---IVVIPGKVEEV-SLPEQVDIIISEPMGYMLFNER 133 (348)
T ss_dssp TSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHT-TCTTT---EEEEESCTTTC-CCSSCEEEEEECCCBTTBTTTS
T ss_pred ccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHc-CCCCc---EEEEEcchhhC-CCCCceeEEEEeCchhcCChHH
Confidence 377777655543 36999999996 899999999884 77 46 99999998763 2235799999986543 2
Q ss_pred hHH---HHHhhCCCCcEEEEEe
Q psy14971 75 VPK---EILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 i~~---~l~~~L~pGGrLv~~~ 93 (156)
+++ .+.+.|||||++++..
T Consensus 134 ~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 134 MLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp HHHHHHHGGGGEEEEEEEESCE
T ss_pred HHHHHHHHHhhcCCCeEEEEec
Confidence 233 3468999999998544
No 201
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.52 E-value=1.3e-07 Score=74.45 Aligned_cols=79 Identities=11% Similarity=0.049 Sum_probs=57.3
Q ss_pred CCCEE--EEEeCCHHHHHHHHHHHhhhcCCCCccceEEEE--ccCCCCC------CCCCCcCEEEEccCCCchH------
Q psy14971 13 ERALV--LILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSV--KDGSKGH------AEEGPYDIIHLGAACIEVP------ 76 (156)
Q Consensus 13 ~~g~V--~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~--gD~~~~~------~~~~~fD~I~i~~~~~~i~------ 76 (156)
+..+| +++|.+++|++.|+++++..-++.| +++.. +++.+.. ...++||+|++....++++
T Consensus 79 ~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l 155 (292)
T 2aot_A 79 PGVCINNEVVEPSAEQIAKYKELVAKTSNLEN---VKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATL 155 (292)
T ss_dssp TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTT---EEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHH
T ss_pred CCceeeEEEEeCCHHHHHHHHHHHHhccCCCc---ceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHH
Confidence 45655 9999999999999999865114556 76654 3432211 1246899999999988765
Q ss_pred HHHHhhCCCCcEEEEEec
Q psy14971 77 KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 156 ~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 156 KFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp HHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHcCCCcEEEEEEe
Confidence 356889999999999754
No 202
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.51 E-value=2.7e-07 Score=74.18 Aligned_cols=89 Identities=15% Similarity=0.111 Sum_probs=67.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCchHH---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIEVPK--- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~i~~--- 77 (156)
|.++.......|..+++++|+ +++++.|+++++. .+..++ ++++.+|..+..+ ....||+|++....++.++
T Consensus 191 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~--v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~ 266 (352)
T 3mcz_A 191 GTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHA-HDLGGR--VEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREA 266 (352)
T ss_dssp CHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHH-TTCGGG--EEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHH
T ss_pred CHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHh-cCCCCc--eEEEeCCcccCcccCCCCccEEEEecccccCCHHHH
Confidence 556654334456689999999 8999999999988 476443 9999999876431 2356999999988876543
Q ss_pred -----HHHhhCCCCcEEEEEec
Q psy14971 78 -----EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 -----~l~~~L~pGGrLv~~~~ 94 (156)
.+.+.|+|||+|++...
T Consensus 267 ~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 267 REVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEe
Confidence 46789999999998653
No 203
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.51 E-value=4.7e-07 Score=65.72 Aligned_cols=83 Identities=18% Similarity=0.083 Sum_probs=60.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccC-CCch-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAA-CIEV----- 75 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~-~~~i----- 75 (156)
|.++...... +.+|+++|+++++++.|++++. + ++++.+|..+......+||+|++... ...+
T Consensus 58 G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~------~---~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~ 126 (195)
T 3cgg_A 58 GRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP------E---ARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGR 126 (195)
T ss_dssp THHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT------T---SEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHH
T ss_pred CHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC------C---CcEEEcccccCCCCCCceeEEEECCcHHhhcChHHH
Confidence 4555433333 4699999999999999998753 4 78999998764333468999999843 3333
Q ss_pred ---HHHHHhhCCCCcEEEEEecc
Q psy14971 76 ---PKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 76 ---~~~l~~~L~pGGrLv~~~~~ 95 (156)
...+.+.|+|||++++....
T Consensus 127 ~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 127 EPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEET
T ss_pred HHHHHHHHHHhCCCCEEEEEeCC
Confidence 23567899999999997754
No 204
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.50 E-value=1.6e-06 Score=68.17 Aligned_cols=90 Identities=8% Similarity=-0.002 Sum_probs=61.0
Q ss_pred CchHHHHHHhcCCCCEEEEEeC-CHHHHHHHHHHH-----hhhcCCC-----CccceEEEEccCCCC---CC---CCCCc
Q psy14971 1 MGDLNVIVGIKGERALVLILNH-YMKVKSKNQNNK-----KLNIKQN-----RKSFKNVSVKDGSKG---HA---EEGPY 63 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~-~~~~~~~A~~~l-----~~~~g~~-----n~~~v~~~~gD~~~~---~~---~~~~f 63 (156)
.|.+++.+...+ .++|+++|+ ++++++.|++|+ +. .++. + ++++..|..+. .. ...+|
T Consensus 90 ~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~-~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~~f 164 (281)
T 3bzb_A 90 AGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANS-CSSETVKRAS---PKVVPYRWGDSPDSLQRCTGLQRF 164 (281)
T ss_dssp TSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC-----------CC---CEEEECCTTSCTHHHHHHHSCSSB
T ss_pred ccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhh-cccccCCCCC---eEEEEecCCCccHHHHhhccCCCC
Confidence 477887665555 359999999 899999999999 55 2543 5 88886554332 11 23679
Q ss_pred CEEEEccCCCch------HHHHHhhCC---C--CcEEEEEecc
Q psy14971 64 DIIHLGAACIEV------PKEILAQLK---P--GGRLVFHKGL 95 (156)
Q Consensus 64 D~I~i~~~~~~i------~~~l~~~L~---p--GGrLv~~~~~ 95 (156)
|+|++.....+. .+.+.+.|+ | ||++++....
T Consensus 165 D~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 165 QVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp SEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred CEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 999986555432 245678899 9 9998886553
No 205
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.50 E-value=8.2e-08 Score=73.55 Aligned_cols=89 Identities=17% Similarity=0.137 Sum_probs=63.2
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-----------------------------CCccce-EEEEc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-----------------------------NRKSFK-NVSVK 51 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-----------------------------~n~~~v-~~~~g 51 (156)
|.++......+. .+|+++|+++.+++.|+++++.. +. .+ + +++.+
T Consensus 68 G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---v~~~~~~ 142 (265)
T 2i62_A 68 TIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKE-PGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA---IKQVLKC 142 (265)
T ss_dssp CCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTC-TTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH---EEEEEEC
T ss_pred cHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcC-CccccchhhhhhhhcccccccchHHHHHHhhhh---heeEEEe
Confidence 344443333332 48999999999999999998652 20 12 6 89999
Q ss_pred cCCCCCC-CC---CCcCEEEEccCCC----chH------HHHHhhCCCCcEEEEEecc
Q psy14971 52 DGSKGHA-EE---GPYDIIHLGAACI----EVP------KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 52 D~~~~~~-~~---~~fD~I~i~~~~~----~i~------~~l~~~L~pGGrLv~~~~~ 95 (156)
|..+..+ .. ++||+|++....+ .++ ..+.+.|||||+|++....
T Consensus 143 d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 143 DVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp CTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred eeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 9876433 23 6899999988776 432 3567899999999997643
No 206
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.49 E-value=1.1e-07 Score=78.92 Aligned_cols=90 Identities=14% Similarity=0.039 Sum_probs=67.1
Q ss_pred CchHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccc-eEEEEccCCCCCC-C-CCCcCEEEEccCCC--c
Q psy14971 1 MGDLNVIVGIKGE-RALVLILNHYMKVKSKNQNNKKLNIKQNRKSF-KNVSVKDGSKGHA-E-EGPYDIIHLGAACI--E 74 (156)
Q Consensus 1 ~G~la~la~l~g~-~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~-v~~~~gD~~~~~~-~-~~~fD~I~i~~~~~--~ 74 (156)
.|.+++.+..... .++|+++|++++.++.+++|++.+ |+++ . ++++.+|+.+... . ...||+|+++.-.. .
T Consensus 63 tG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N-gl~~--~~v~v~~~Da~~~l~~~~~~~fD~V~lDP~g~~~~ 139 (392)
T 3axs_A 63 SGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN-NIPE--DRYEIHGMEANFFLRKEWGFGFDYVDLDPFGTPVP 139 (392)
T ss_dssp TSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT-TCCG--GGEEEECSCHHHHHHSCCSSCEEEEEECCSSCCHH
T ss_pred ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh-CCCC--ceEEEEeCCHHHHHHHhhCCCCcEEEECCCcCHHH
Confidence 4778876544322 268999999999999999999985 7754 2 7899999855322 2 35799999998321 3
Q ss_pred hHHHHHhhCCCCcEEEEEe
Q psy14971 75 VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pGGrLv~~~ 93 (156)
+-+...+.|++||+|++..
T Consensus 140 ~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 140 FIESVALSMKRGGILSLTA 158 (392)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEe
Confidence 4556778899999888865
No 207
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.47 E-value=6e-07 Score=71.13 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=61.1
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhc------CCCCccceEEEEccCCCCC-----C-CCCCcCEEEEccCCCch----H
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNI------KQNRKSFKNVSVKDGSKGH-----A-EEGPYDIIHLGAACIEV----P 76 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~------g~~n~~~v~~~~gD~~~~~-----~-~~~~fD~I~i~~~~~~i----~ 76 (156)
+..+|+++|+++++++.|++++...- +..+ ++++++|+.+.. + ..++||+|++..+.+.+ +
T Consensus 56 ~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~ 132 (313)
T 3bgv_A 56 RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFS---AEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYE 132 (313)
T ss_dssp TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCE---EEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccce---EEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHH
Confidence 45799999999999999999987620 2235 999999987642 2 23589999999887544 2
Q ss_pred ------HHHHhhCCCCcEEEEEec
Q psy14971 77 ------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ------~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 133 ~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 133 QADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEEecC
Confidence 346789999999999765
No 208
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.47 E-value=7.1e-07 Score=70.17 Aligned_cols=84 Identities=10% Similarity=-0.007 Sum_probs=57.7
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC--CCCCCCCcCEEEEccCCCchH--
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK--GHAEEGPYDIIHLGAACIEVP-- 76 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~--~~~~~~~fD~I~i~~~~~~i~-- 76 (156)
.|.++..+... .++|+++|++++|++.|+++++.. . +.....+... .....++||+|+++...++++
T Consensus 56 tG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~----~---v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~ 126 (261)
T 3iv6_A 56 TRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR----C---VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTE 126 (261)
T ss_dssp CHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS----C---CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHH
T ss_pred chHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc----c---ceeeeeecccccccccCCCccEEEEhhhhHhCCHH
Confidence 36666543333 379999999999999999998752 2 3433334322 111246899999998876542
Q ss_pred ------HHHHhhCCCCcEEEEEec
Q psy14971 77 ------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ------~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.| |||+|++.+.
T Consensus 127 ~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 127 EARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp HHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred HHHHHHHHHHHhC-cCcEEEEEec
Confidence 2456788 9999999765
No 209
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.47 E-value=8.6e-08 Score=78.75 Aligned_cols=90 Identities=13% Similarity=0.081 Sum_probs=64.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcC---CC-----CccceEEEEccCCCCCC----CCCCcCEEEEc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIK---QN-----RKSFKNVSVKDGSKGHA----EEGPYDIIHLG 69 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g---~~-----n~~~v~~~~gD~~~~~~----~~~~fD~I~i~ 69 (156)
|.++..+..-++ .+|+++|+|+++++.|++++.. ++ ++ + ++++.+|+.+.+. ...+||+||++
T Consensus 200 G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~-l~~~~l~dp~~~r---v~vi~~Da~~~L~~~~~~~~~fDvII~D 274 (364)
T 2qfm_A 200 GGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRK-TCGDVLDNLKGDC---YQVLIEDCIPVLKRYAKEGREFDYVIND 274 (364)
T ss_dssp CHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC-----CCSSSEETT---EEEEESCHHHHHHHHHHHTCCEEEEEEE
T ss_pred hHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHH-hccccccccCCCc---EEEEECcHHHHHHhhhccCCCceEEEEC
Confidence 455543333344 8999999999999999999864 22 11 4 9999999976443 24689999999
Q ss_pred cCC-C--chH---------HHH----HhhCCCCcEEEEEeccC
Q psy14971 70 AAC-I--EVP---------KEI----LAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 70 ~~~-~--~i~---------~~l----~~~L~pGGrLv~~~~~~ 96 (156)
... + ..| ..+ .+.|+|||+|++..+..
T Consensus 275 ~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 275 LTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 864 2 112 233 68999999999987653
No 210
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.46 E-value=5.9e-07 Score=71.66 Aligned_cols=78 Identities=12% Similarity=0.090 Sum_probs=57.0
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCC------CccceEEEEccCCCCC--------CCCCCcCEEEEccCCCc-----
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQN------RKSFKNVSVKDGSKGH--------AEEGPYDIIHLGAACIE----- 74 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~------n~~~v~~~~gD~~~~~--------~~~~~fD~I~i~~~~~~----- 74 (156)
.++|+|+|++++|++.|+++... .+.. + +++.++|..... ...++||+|++..+.+.
T Consensus 71 ~~~v~GiD~S~~~l~~A~~~~~~-~~~~~~~~~~~---~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~ 146 (302)
T 2vdw_A 71 IALLVATDPDADAIARGNERYNK-LNSGIKTKYYK---FDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR 146 (302)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHH-HCC----CCCE---EEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT
T ss_pred CCeEEEEECCHHHHHHHHHHHHh-ccccccccccc---cchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHH
Confidence 47999999999999999999876 3532 3 567788762211 12468999998776532
Q ss_pred ----hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 ----VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 ----i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+...+.+.|||||++++....
T Consensus 147 ~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 147 HYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp THHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 224678999999999987653
No 211
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.44 E-value=4.7e-07 Score=74.98 Aligned_cols=78 Identities=10% Similarity=-0.008 Sum_probs=59.1
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-------h---HHHHHhhCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE-------V---PKEILAQLK 84 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~-------i---~~~l~~~L~ 84 (156)
.+|+++|+++++++.|++|++.+ |+.+. ++++++|+.+... ..+||+|+++.+... + -..+.+.||
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~-gl~~~--I~~~~~D~~~~~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEA-GLGDL--ITFRQLQVADFQT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYK 339 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHT-TCTTC--SEEEECCGGGCCC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHc-CCCCc--eEEEECChHhCCC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHh
Confidence 57999999999999999999984 87643 9999999987433 358999999976521 1 122334444
Q ss_pred --CCcEEEEEeccC
Q psy14971 85 --PGGRLVFHKGLH 96 (156)
Q Consensus 85 --pGGrLv~~~~~~ 96 (156)
+||++++.....
T Consensus 340 ~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 340 RMPTWSVYVLTSYE 353 (393)
T ss_dssp TCTTCEEEEEECCT
T ss_pred cCCCCEEEEEECCH
Confidence 499999988754
No 212
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.43 E-value=3.2e-07 Score=65.97 Aligned_cols=79 Identities=11% Similarity=0.089 Sum_probs=59.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++......+ .+|+++|+++++++.|+++ . .+ ++++.+| ... ..+.||.|++......++
T Consensus 29 G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~--~----~~---v~~~~~d--~~~-~~~~~D~v~~~~~l~~~~~~~~~ 94 (170)
T 3i9f_A 29 GFYCKYLLEFA--TKLYCIDINVIALKEVKEK--F----DS---VITLSDP--KEI-PDNSVDFILFANSFHDMDDKQHV 94 (170)
T ss_dssp CTTHHHHHTTE--EEEEEECSCHHHHHHHHHH--C----TT---SEEESSG--GGS-CTTCEEEEEEESCSTTCSCHHHH
T ss_pred CHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh--C----CC---cEEEeCC--CCC-CCCceEEEEEccchhcccCHHHH
Confidence 44444333323 4999999999999999988 1 35 8999999 222 346899999999887653
Q ss_pred -HHHHhhCCCCcEEEEEec
Q psy14971 77 -KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||++++...
T Consensus 95 l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 95 ISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEEc
Confidence 467899999999999754
No 213
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.42 E-value=2.4e-07 Score=71.99 Aligned_cols=77 Identities=17% Similarity=0.027 Sum_probs=56.3
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhc-CC---------------------------CCccceE-EEEccCCCCCC----CCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNI-KQ---------------------------NRKSFKN-VSVKDGSKGHA----EEG 61 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~-g~---------------------------~n~~~v~-~~~gD~~~~~~----~~~ 61 (156)
.+|+++|+++.|++.|+++++..- ++ .+ ++ ++.+|..+..+ ..+
T Consensus 79 ~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~D~~~~~~~~~~~~~ 155 (263)
T 2a14_A 79 QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA---VKRVLKCDVHLGNPLAPAVLP 155 (263)
T ss_dssp EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH---EEEEEECCTTSSSTTTTCCCC
T ss_pred cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh---hheEEeccccCCCCCCccccC
Confidence 479999999999999999875410 00 12 44 88999877422 246
Q ss_pred CcCEEEEccCCCch----H------HHHHhhCCCCcEEEEEec
Q psy14971 62 PYDIIHLGAACIEV----P------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 62 ~fD~I~i~~~~~~i----~------~~l~~~L~pGGrLv~~~~ 94 (156)
+||+|++....+.+ + ..+.+.|||||+|++...
T Consensus 156 ~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 156 LADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 89999999876543 2 345699999999999764
No 214
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.42 E-value=2.2e-06 Score=71.56 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=64.4
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH---
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK--- 77 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~--- 77 (156)
.|.+++.+... ..+|+++|+++++++.|++|++.+ ++ + ++++.+|+.+..+. .||.|+++.+.....+
T Consensus 301 ~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~n-gl-~---v~~~~~d~~~~~~~--~fD~Vv~dPPr~g~~~~~~ 371 (425)
T 2jjq_A 301 VGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEIN-NV-D---AEFEVASDREVSVK--GFDTVIVDPPRAGLHPRLV 371 (425)
T ss_dssp TTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH-TC-C---EEEEECCTTTCCCT--TCSEEEECCCTTCSCHHHH
T ss_pred chHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc-CC-c---EEEEECChHHcCcc--CCCEEEEcCCccchHHHHH
Confidence 36666543332 369999999999999999999885 65 4 89999999875443 7999999987654433
Q ss_pred HHHhhCCCCcEEEEEec
Q psy14971 78 EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 ~l~~~L~pGGrLv~~~~ 94 (156)
.....|+|||++++...
T Consensus 372 ~~l~~l~p~givyvsc~ 388 (425)
T 2jjq_A 372 KRLNREKPGVIVYVSCN 388 (425)
T ss_dssp HHHHHHCCSEEEEEESC
T ss_pred HHHHhcCCCcEEEEECC
Confidence 23456899999988754
No 215
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.42 E-value=5e-07 Score=76.59 Aligned_cols=86 Identities=15% Similarity=0.054 Sum_probs=63.8
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-----
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE----- 74 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~----- 74 (156)
.|.+++.+... +..+|+++|+++ +++.|+++++.+ |+ ++ ++++.+|..+. +..++||+|+++.....
T Consensus 169 tG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~-gl~~~---v~~~~~d~~~~-~~~~~fD~Ivs~~~~~~~~~e~ 241 (480)
T 3b3j_A 169 SGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN-NLTDR---IVVIPGKVEEV-SLPEQVDIIISEPMGYMLFNER 241 (480)
T ss_dssp TTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHT-TCTTT---EEEEESCTTTC-CCSSCEEEEECCCCHHHHTCHH
T ss_pred ccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHc-CCCCc---EEEEECchhhC-ccCCCeEEEEEeCchHhcCcHH
Confidence 37777765554 347999999998 999999999984 87 46 99999998763 22357999999765321
Q ss_pred hHH---HHHhhCCCCcEEEEEe
Q psy14971 75 VPK---EILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 i~~---~l~~~L~pGGrLv~~~ 93 (156)
+.+ .+.+.|||||+|++..
T Consensus 242 ~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 242 MLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHHHHHGGGGEEEEEEEESCE
T ss_pred HHHHHHHHHHhcCCCCEEEEEe
Confidence 222 3368899999998543
No 216
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.41 E-value=4.7e-07 Score=68.20 Aligned_cols=80 Identities=10% Similarity=-0.015 Sum_probs=57.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEcc-CCCch-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGA-ACIEV----- 75 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~-~~~~i----- 75 (156)
|.++......+ .+|+++|+++++++.|++++ .+ ++++.+|+.+... ..+||+|++.. ....+
T Consensus 52 G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~------~~---~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~ 119 (239)
T 3bxo_A 52 GTHLEHFTKEF--GDTAGLELSEDMLTHARKRL------PD---ATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEE 119 (239)
T ss_dssp SHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC------TT---CEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHH
T ss_pred CHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC------CC---CEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHH
Confidence 55554332223 38999999999999999864 25 8899999876433 56899999544 44433
Q ss_pred ----HHHHHhhCCCCcEEEEEe
Q psy14971 76 ----PKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 ----~~~l~~~L~pGGrLv~~~ 93 (156)
...+.+.|+|||++++..
T Consensus 120 ~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 120 LGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCeEEEEEe
Confidence 135678999999999964
No 217
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.41 E-value=2.6e-06 Score=71.06 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=64.0
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC----CCCcCEEEEccCCCchHH
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE----EGPYDIIHLGAACIEVPK 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~~~i~~ 77 (156)
|.+++.+... .++|+++|+++++++.|++|++.+ +++| ++++.+|+.+.+.. ...||.|+++.+.....+
T Consensus 298 G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~-~~~~---v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~ 371 (433)
T 1uwv_A 298 GNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN-GLQN---VTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAG 371 (433)
T ss_dssp TTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT-TCCS---EEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCCHH
T ss_pred CHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc-CCCc---eEEEECCHHHHhhhhhhhcCCCCEEEECCCCccHHH
Confidence 5666543322 479999999999999999999984 8888 99999999874432 357999999987765443
Q ss_pred H--HHhhCCCCcEEEEEec
Q psy14971 78 E--ILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 ~--l~~~L~pGGrLv~~~~ 94 (156)
. ....++|++.+++...
T Consensus 372 ~~~~l~~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 372 VMQQIIKLEPIRIVYVSCN 390 (433)
T ss_dssp HHHHHHHHCCSEEEEEESC
T ss_pred HHHHHHhcCCCeEEEEECC
Confidence 2 1234678887777553
No 218
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.39 E-value=2.1e-06 Score=68.66 Aligned_cols=91 Identities=16% Similarity=0.173 Sum_probs=66.0
Q ss_pred chHHHHHHhc--CCCCEEEEEeCCHHHHHHHHHHHhhh----cCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCCc
Q psy14971 2 GDLNVIVGIK--GERALVLILNHYMKVKSKNQNNKKLN----IKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~la~l~--g~~g~V~avD~~~~~~~~A~~~l~~~----~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~~ 74 (156)
|+-+++-+++ .+..+|+.+|+|+++++.|++.+... +.-++ ++++.+|+.+-+.. ...||+|+++..-+.
T Consensus 93 GdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpR---v~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~ 169 (294)
T 3o4f_A 93 GDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPR---FKLVIDDGVNFVNQTSQTFDVIISDCTDPI 169 (294)
T ss_dssp TTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTT---EEEEESCTTTTTSCSSCCEEEEEESCCCCC
T ss_pred CchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCc---EEEEechHHHHHhhccccCCEEEEeCCCcC
Confidence 3344443333 23579999999999999999988541 12234 99999999875543 468999999986432
Q ss_pred ----------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 ----------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 ----------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
.-+.+.+.|+|||++++-.+.
T Consensus 170 ~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 170 GPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp CTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 125678999999999997653
No 219
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.38 E-value=4.1e-07 Score=70.29 Aligned_cols=81 Identities=10% Similarity=0.052 Sum_probs=59.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++... ..++.+|+++|+++.+++.|+++. | ++++.+|+.+.....++||.|++.....+++
T Consensus 46 G~~~~~l--~~~~~~v~gvD~s~~~~~~a~~~~-------~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 113 (261)
T 3ege_A 46 GGYSVAL--ANQGLFVYAVEPSIVMRQQAVVHP-------Q---VEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKS 113 (261)
T ss_dssp SHHHHHH--HTTTCEEEEECSCHHHHHSSCCCT-------T---EEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHH
T ss_pred cHHHHHH--HhCCCEEEEEeCCHHHHHHHHhcc-------C---CEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHH
Confidence 4444332 236689999999999988776432 5 9999999976433457899999999876553
Q ss_pred -HHHHhhCCCCcEEEEEecc
Q psy14971 77 -KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 -~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|| ||++++....
T Consensus 114 l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 114 FQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp HHHHHHHBC-SSCEEEEEEC
T ss_pred HHHHHHHhC-CcEEEEEEcC
Confidence 35788999 9988876543
No 220
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.36 E-value=2e-06 Score=71.02 Aligned_cols=78 Identities=5% Similarity=-0.101 Sum_probs=59.5
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC-------chH---HHHHhhCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI-------EVP---KEILAQLK 84 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~-------~i~---~~l~~~L~ 84 (156)
.+|+++|+++++++.|++|++.+ |+.+. ++++.+|+.+... ..+||.|+++.+.. .+. ..+.+.||
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~-gl~~~--I~~~~~D~~~l~~-~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREV-GLEDV--VKLKQMRLQDFKT-NKINGVLISNPPYGERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHT-TCTTT--EEEEECCGGGCCC-CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCHHHHHHHHHHHHHc-CCCCc--eEEEECChHHCCc-cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHh
Confidence 57999999999999999999994 87654 9999999887433 35899999997642 111 12344555
Q ss_pred C--CcEEEEEeccC
Q psy14971 85 P--GGRLVFHKGLH 96 (156)
Q Consensus 85 p--GGrLv~~~~~~ 96 (156)
+ ||++++.....
T Consensus 333 ~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 333 PLKTWSQFILTNDT 346 (384)
T ss_dssp TCTTSEEEEEESCT
T ss_pred hCCCcEEEEEECCH
Confidence 4 99999988754
No 221
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.35 E-value=1.5e-06 Score=70.04 Aligned_cols=73 Identities=18% Similarity=0.121 Sum_probs=59.4
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch-------------------
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV------------------- 75 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i------------------- 75 (156)
..|+|+|+++.+++.|+.|+... |. + +.++.+|...... ..+||+|+++.+...+
T Consensus 160 ~~v~GiDi~~~~~~~a~~n~~~~-g~-~---~~i~~~D~l~~~~-~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~ 233 (344)
T 2f8l_A 160 VHASGVDVDDLLISLALVGADLQ-RQ-K---MTLLHQDGLANLL-VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSF 233 (344)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHH-TC-C---CEEEESCTTSCCC-CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEE
T ss_pred ceEEEEECCHHHHHHHHHHHHhC-CC-C---ceEEECCCCCccc-cCCccEEEECCCCCCcCchhhhhhccccCCCCcch
Confidence 78999999999999999999884 77 6 8999999876443 4679999999774221
Q ss_pred -----HHHHHhhCCCCcEEEEEe
Q psy14971 76 -----PKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 -----~~~l~~~L~pGGrLv~~~ 93 (156)
-..+.+.|+|||++++.+
T Consensus 234 ~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 234 AHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEE
Confidence 234568999999999987
No 222
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.35 E-value=9.5e-07 Score=69.83 Aligned_cols=88 Identities=19% Similarity=0.180 Sum_probs=61.5
Q ss_pred HHH-HHHhcCC---CCEEEEEeCCHHHHHHHHHHHh--------------hhc--------C---C-----CCccceEEE
Q psy14971 4 LNV-IVGIKGE---RALVLILNHYMKVKSKNQNNKK--------------LNI--------K---Q-----NRKSFKNVS 49 (156)
Q Consensus 4 la~-la~l~g~---~g~V~avD~~~~~~~~A~~~l~--------------~~~--------g---~-----~n~~~v~~~ 49 (156)
+|+ +++..+. +.+|+|+|+++++++.|+++.- +.+ | + .+ |+|.
T Consensus 123 iAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~---V~F~ 199 (274)
T 1af7_A 123 IAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANY---VEFS 199 (274)
T ss_dssp HHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTT---EEEE
T ss_pred HHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhccc---CeEE
Confidence 554 3455453 3489999999999999999751 000 0 0 24 9999
Q ss_pred EccCCCC-CCCCCCcCEEEEccCCCch--------HHHHHhhCCCCcEEEEEec
Q psy14971 50 VKDGSKG-HAEEGPYDIIHLGAACIEV--------PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 50 ~gD~~~~-~~~~~~fD~I~i~~~~~~i--------~~~l~~~L~pGGrLv~~~~ 94 (156)
.+|..+. ++..++||+|++......+ -..+.+.|+|||.|++-..
T Consensus 200 ~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 200 SVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp ECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTT
T ss_pred ecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence 9998873 3324689999997765433 2356789999999998543
No 223
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.34 E-value=4.5e-07 Score=74.37 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=66.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC------CCccceEEEEccCCCCC-CCCCCcCEEEEccCCCc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ------NRKSFKNVSVKDGSKGH-AEEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~------~n~~~v~~~~gD~~~~~-~~~~~fD~I~i~~~~~~ 74 (156)
|..+.||++ +..+.|+++|+++..++..++|+++ ++. .| +.+...|+.... .....||+|+++++|+.
T Consensus 161 GKT~~la~~-~~~~~l~A~D~~~~R~~~l~~~l~r-~~~~~~~~~~~---v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg 235 (359)
T 4fzv_A 161 GKTLALLQT-GCCRNLAANDLSPSRIARLQKILHS-YVPEEIRDGNQ---VRVTSWDGRKWGELEGDTYDRVLVDVPCTT 235 (359)
T ss_dssp HHHHHHHHT-TCEEEEEEECSCHHHHHHHHHHHHH-HSCTTTTTSSS---EEEECCCGGGHHHHSTTCEEEEEEECCCCC
T ss_pred HHHHHHHHh-cCCCcEEEEcCCHHHHHHHHHHHHH-hhhhhhccCCc---eEEEeCchhhcchhccccCCEEEECCccCC
Confidence 344456654 4558999999999999999999998 464 35 889999976521 12467999999999864
Q ss_pred h--------H----------------------HHHHhhCCCCcEEEEEecc
Q psy14971 75 V--------P----------------------KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 i--------~----------------------~~l~~~L~pGGrLv~~~~~ 95 (156)
- | ....+.|||||+||..+++
T Consensus 236 ~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 236 DRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp HHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 1 1 1235779999999998873
No 224
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.34 E-value=1.5e-06 Score=68.72 Aligned_cols=85 Identities=9% Similarity=0.006 Sum_probs=68.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|-||+......+.++|+++|+|+.+++.+++|+.. +|+ + .++.+.|.....+ .++||++++.-..+.+.+
T Consensus 144 GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~-~g~-~---~~~~v~D~~~~~p-~~~~DvaL~lkti~~Le~q~kg 217 (281)
T 3lcv_B 144 NPLAAPWMGLPAETVYIASDIDARLVGFVDEALTR-LNV-P---HRTNVADLLEDRL-DEPADVTLLLKTLPCLETQQRG 217 (281)
T ss_dssp GGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHH-TTC-C---EEEEECCTTTSCC-CSCCSEEEETTCHHHHHHHSTT
T ss_pred cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHh-cCC-C---ceEEEeeecccCC-CCCcchHHHHHHHHHhhhhhhH
Confidence 45565555556789999999999999999999998 476 4 7899999877654 468999999988877653
Q ss_pred ---HHHhhCCCCcEEEEE
Q psy14971 78 ---EILAQLKPGGRLVFH 92 (156)
Q Consensus 78 ---~l~~~L~pGGrLv~~ 92 (156)
.+++.|+++|.+|-.
T Consensus 218 ~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 218 SGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp HHHHHHHHSSCSEEEEEE
T ss_pred HHHHHHHHhCCCCEEEec
Confidence 578899999887763
No 225
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.30 E-value=2.7e-06 Score=61.86 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=55.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-------
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------- 74 (156)
|.++..+...+ +|+++|+++++++. . ++ ++++.+|+.+..++ ++||+|+++.+...
T Consensus 35 G~~~~~l~~~~---~v~gvD~s~~~~~~------~----~~---~~~~~~d~~~~~~~-~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 35 GVITEQLRKRN---TVVSTDLNIRALES------H----RG---GNLVRADLLCSINQ-ESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp CHHHHHHTTTS---EEEEEESCHHHHHT------C----SS---SCEEECSTTTTBCG-GGCSEEEECCCCBTTCCCTTT
T ss_pred cHHHHHHHhcC---cEEEEECCHHHHhc------c----cC---CeEEECChhhhccc-CCCCEEEECCCCccCCccccc
Confidence 55555443333 99999999999987 2 35 88999999875443 78999999876542
Q ss_pred --------hHHHHHhhCCCCcEEEEEec
Q psy14971 75 --------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 --------i~~~l~~~L~pGGrLv~~~~ 94 (156)
+...+.+.| |||++++...
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 224677788 9999999764
No 226
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.29 E-value=8.7e-07 Score=69.32 Aligned_cols=88 Identities=13% Similarity=0.081 Sum_probs=59.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh----------------cCC-------------CCccceEEEEcc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN----------------IKQ-------------NRKSFKNVSVKD 52 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~----------------~g~-------------~n~~~v~~~~gD 52 (156)
|.++.++... ...+|+++|++++|++.|+++++.. .+. .. ++++.+|
T Consensus 83 G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~D 158 (289)
T 2g72_A 83 TVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV---KRVLPID 158 (289)
T ss_dssp CCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE---EEEECCC
T ss_pred ChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh---ceEEecc
Confidence 4444433332 2469999999999999999876530 010 01 4577778
Q ss_pred CCCCCC------CCCCcCEEEEccCCCc----hH------HHHHhhCCCCcEEEEEe
Q psy14971 53 GSKGHA------EEGPYDIIHLGAACIE----VP------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 53 ~~~~~~------~~~~fD~I~i~~~~~~----i~------~~l~~~L~pGGrLv~~~ 93 (156)
+.+..+ ..++||+|++...... ++ ..+.+.|||||+|++..
T Consensus 159 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 159 VHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp TTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 876322 1246999999988765 33 25689999999999964
No 227
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.27 E-value=5.6e-07 Score=71.60 Aligned_cols=88 Identities=8% Similarity=0.118 Sum_probs=65.4
Q ss_pred chHHH-HHHhcC----CCCEEEEEeCCH--------------------------HHHHHHHHHHhhhcCC--CCccceEE
Q psy14971 2 GDLNV-IVGIKG----ERALVLILNHYM--------------------------KVKSKNQNNKKLNIKQ--NRKSFKNV 48 (156)
Q Consensus 2 G~la~-la~l~g----~~g~V~avD~~~--------------------------~~~~~A~~~l~~~~g~--~n~~~v~~ 48 (156)
|+-++ ||..+. +.++|+++|..+ ..++.+++|+++ .|+ ++ |++
T Consensus 118 G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~-~gl~~~~---I~l 193 (282)
T 2wk1_A 118 GGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN-YDLLDEQ---VRF 193 (282)
T ss_dssp SHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH-TTCCSTT---EEE
T ss_pred hHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH-cCCCcCc---eEE
Confidence 55553 455543 478999999642 147889999999 587 56 999
Q ss_pred EEccCCCCCCC--CCCcCEEEEccCCC-ch---HHHHHhhCCCCcEEEEEe
Q psy14971 49 SVKDGSKGHAE--EGPYDIIHLGAACI-EV---PKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 49 ~~gD~~~~~~~--~~~fD~I~i~~~~~-~i---~~~l~~~L~pGGrLv~~~ 93 (156)
+.||+.+.++. .++||.|++++... .. -+.+.++|+|||.+++..
T Consensus 194 i~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 194 LPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp EESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred EEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEcC
Confidence 99999765543 36899999999862 22 356788999999999854
No 228
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.27 E-value=1.9e-06 Score=66.43 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=57.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch---H--
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV---P-- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i---~-- 76 (156)
|.++...... +.+|+++|+++++++.|+++.. + . ++.+|+.+.....++||+|++.....++ +
T Consensus 66 G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~------~---~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~ 133 (260)
T 2avn_A 66 GKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV------K---N-VVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDK 133 (260)
T ss_dssp CHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC------S---C-EEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHH
T ss_pred CHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC------C---C-EEECcHHHCCCCCCCEEEEEEcchhhhccccHHH
Confidence 4555433222 4699999999999999998753 1 2 6778887643335789999997654332 2
Q ss_pred --HHHHhhCCCCcEEEEEec
Q psy14971 77 --KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 --~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 134 ~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 134 AFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEeC
Confidence 456789999999998754
No 229
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.24 E-value=2.3e-07 Score=67.38 Aligned_cols=67 Identities=25% Similarity=0.238 Sum_probs=53.0
Q ss_pred EEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC---CCCCcCEEEEccCCCch-H------HHHHhhCCCCcE
Q psy14971 19 ILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA---EEGPYDIIHLGAACIEV-P------KEILAQLKPGGR 88 (156)
Q Consensus 19 avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~---~~~~fD~I~i~~~~~~i-~------~~l~~~L~pGGr 88 (156)
++|++++|++.|++++.. + ++++.+|+.+... ...+||+|++....+.+ + ..+.+.|||||+
T Consensus 25 ~vD~s~~ml~~a~~~~~~-----~---~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~ 96 (176)
T 2ld4_A 25 PVEALKGLVDKLQALTGN-----E---GRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGC 96 (176)
T ss_dssp CHHHHHHHHHHHHHHTTT-----T---SEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEE
T ss_pred eeeCCHHHHHHHHHhccc-----C---cEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEE
Confidence 389999999999988642 4 8899999875433 35789999998877665 3 467899999999
Q ss_pred EEEEe
Q psy14971 89 LVFHK 93 (156)
Q Consensus 89 Lv~~~ 93 (156)
+++..
T Consensus 97 l~~~~ 101 (176)
T 2ld4_A 97 LFLKE 101 (176)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99953
No 230
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.24 E-value=1.4e-06 Score=64.73 Aligned_cols=81 Identities=17% Similarity=0.123 Sum_probs=57.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC----CCCCCCcCEEEEccCCC----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG----HAEEGPYDIIHLGAACI---- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~----~~~~~~fD~I~i~~~~~---- 73 (156)
|.++...... +.+|+++|+++++++.|+++ . + +.++.+|..+. .....+||.|++.....
T Consensus 64 G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~--~-----~---~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~~~ 131 (227)
T 3e8s_A 64 GWLLRALADR--GIEAVGVDGDRTLVDAARAA--G-----A---GEVHLASYAQLAEAKVPVGKDYDLICANFALLHQDI 131 (227)
T ss_dssp CHHHHHHHTT--TCEEEEEESCHHHHHHHHHT--C-----S---SCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSSCC
T ss_pred CHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh--c-----c---cccchhhHHhhcccccccCCCccEEEECchhhhhhH
Confidence 4455433222 46999999999999999977 1 3 55677765432 23345699999988765
Q ss_pred -chHHHHHhhCCCCcEEEEEec
Q psy14971 74 -EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 -~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+...+.+.|||||+|++...
T Consensus 132 ~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 132 IELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEEEec
Confidence 223567899999999999765
No 231
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.21 E-value=3.8e-06 Score=61.80 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=55.2
Q ss_pred chHHH-HHHhcCC-CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----------------------
Q psy14971 2 GDLNV-IVGIKGE-RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---------------------- 57 (156)
Q Consensus 2 G~la~-la~l~g~-~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---------------------- 57 (156)
|.++. ++...++ .++|+++|+++. . ...+ ++++.+|..+..
T Consensus 34 G~~~~~l~~~~~~~~~~v~gvD~s~~---------~---~~~~---v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~ 98 (201)
T 2plw_A 34 GSWCQVILERTKNYKNKIIGIDKKIM---------D---PIPN---VYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKL 98 (201)
T ss_dssp CHHHHHHHHHTTTSCEEEEEEESSCC---------C---CCTT---CEEEECCTTTTSSCCC-----------CHHHHHH
T ss_pred CHHHHHHHHHcCCCCceEEEEeCCcc---------C---CCCC---ceEEEccccchhhhhhccccccccccchhhHHHH
Confidence 66665 4555553 689999999983 1 2346 899999987643
Q ss_pred ---CCCCCcCEEEEccCCCc-----------------hHHHHHhhCCCCcEEEEEec
Q psy14971 58 ---AEEGPYDIIHLGAACIE-----------------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 58 ---~~~~~fD~I~i~~~~~~-----------------i~~~l~~~L~pGGrLv~~~~ 94 (156)
....+||.|+++++.+. +...+.+.|||||++++.+.
T Consensus 99 ~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 99 KEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 13468999999886543 12246789999999998654
No 232
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.21 E-value=5.2e-06 Score=68.44 Aligned_cols=78 Identities=10% Similarity=0.059 Sum_probs=59.3
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-h------H---HHHHhhCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE-V------P---KEILAQLK 84 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~-i------~---~~l~~~L~ 84 (156)
.+|+++|+++++++.|++|++.+ |+.+. +++.++|+.+... ..+||+|+++.+... + . ..+.+.|+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~-gl~~~--i~~~~~D~~~l~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIA-GVDEY--IEFNVGDATQFKS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFR 333 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHH-TCGGG--EEEEECCGGGCCC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHc-CCCCc--eEEEECChhhcCc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHh
Confidence 68999999999999999999985 87522 9999999887433 358999999988631 1 1 12344555
Q ss_pred C--CcEEEEEeccC
Q psy14971 85 P--GGRLVFHKGLH 96 (156)
Q Consensus 85 p--GGrLv~~~~~~ 96 (156)
+ ||++++.....
T Consensus 334 ~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 334 KLKNWSYYLITSYE 347 (385)
T ss_dssp TSBSCEEEEEESCT
T ss_pred hCCCCEEEEEECCH
Confidence 4 99999987643
No 233
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.20 E-value=2.3e-07 Score=71.46 Aligned_cols=86 Identities=14% Similarity=0.105 Sum_probs=51.8
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh--cCCCCccceEEEE-ccCCCCCCCCCCcCEEEEccCCCchH
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLN--IKQNRKSFKNVSV-KDGSKGHAEEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~--~g~~n~~~v~~~~-gD~~~~~~~~~~fD~I~i~~~~~~i~ 76 (156)
.|.++. +++. +. .+|+++|++++|++.|+++..+. .+..| +++.. +|.....++...||.++++. ..+.
T Consensus 48 tG~~t~~la~~-g~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~D~v~~~l--~~~l 120 (232)
T 3opn_A 48 TGGFTDVMLQN-GA-KLVYALDVGTNQLAWKIRSDERVVVMEQFN---FRNAVLADFEQGRPSFTSIDVSFISL--DLIL 120 (232)
T ss_dssp TSHHHHHHHHT-TC-SEEEEECSSCCCCCHHHHTCTTEEEECSCC---GGGCCGGGCCSCCCSEEEECCSSSCG--GGTH
T ss_pred CCHHHHHHHhc-CC-CEEEEEcCCHHHHHHHHHhCccccccccce---EEEeCHhHcCcCCCCEEEEEEEhhhH--HHHH
Confidence 366664 4444 43 59999999999999988765541 11123 33333 33222112222344444332 4456
Q ss_pred HHHHhhCCCCcEEEEEe
Q psy14971 77 KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|||||++++.+
T Consensus 121 ~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 121 PPLYEILEKNGEVAALI 137 (232)
T ss_dssp HHHHHHSCTTCEEEEEE
T ss_pred HHHHHhccCCCEEEEEE
Confidence 78899999999999974
No 234
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.18 E-value=2.1e-06 Score=65.15 Aligned_cols=80 Identities=9% Similarity=-0.009 Sum_probs=56.9
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++..+... +.+|+++|+++++++.|+++ ++++.+|..+.. ...++||+|++.....+++
T Consensus 53 G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~ 118 (240)
T 3dli_A 53 GEFLELCKEE--GIESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPER 118 (240)
T ss_dssp THHHHHHHHH--TCCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGG
T ss_pred CHHHHHHHhC--CCcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHH
Confidence 5555433333 36899999999999988755 345666764421 1247899999998876654
Q ss_pred -----HHHHhhCCCCcEEEEEecc
Q psy14971 77 -----KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 -----~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|||||++++....
T Consensus 119 ~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 119 LFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp HHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 3567899999999997654
No 235
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.18 E-value=1.5e-06 Score=69.33 Aligned_cols=72 Identities=14% Similarity=0.046 Sum_probs=53.8
Q ss_pred HHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEE-EEccCCCCCCCCCCcCEEEEccCCC----------
Q psy14971 5 NVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNV-SVKDGSKGHAEEGPYDIIHLGAACI---------- 73 (156)
Q Consensus 5 a~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~-~~gD~~~~~~~~~~fD~I~i~~~~~---------- 73 (156)
.++++++++.++|+++|+++. + .+ +++ +++|+.+... .++||+|+++...+
T Consensus 83 ~~~a~~~~~~~~V~gvDis~~--------v------~~---v~~~i~gD~~~~~~-~~~fD~Vvsn~~~~~~g~~~~d~~ 144 (290)
T 2xyq_A 83 AVLRQWLPTGTLLVDSDLNDF--------V------SD---ADSTLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKEND 144 (290)
T ss_dssp HHHHHHSCTTCEEEEEESSCC--------B------CS---SSEEEESCGGGCCC-SSCEEEEEECCCCCC---CCSCCC
T ss_pred HHHHHHcCCCCEEEEEECCCC--------C------CC---CEEEEECccccCCc-cCcccEEEEcCCcccccccccccc
Confidence 456778887899999999998 1 24 778 9999876322 36799999986532
Q ss_pred -------chHHHHHhhCCCCcEEEEEec
Q psy14971 74 -------EVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 -------~i~~~l~~~L~pGGrLv~~~~ 94 (156)
.+...+.+.|||||++++.+.
T Consensus 145 ~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 145 SKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred chHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 123456789999999999653
No 236
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.18 E-value=1.4e-05 Score=64.83 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=64.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|.++.......|..+++..|. |++++.|+++++.. +.++ |+++.||..+.. ...+|++++...+++.++
T Consensus 191 G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~-~~~r---v~~~~gD~~~~~--~~~~D~~~~~~vlh~~~d~~~~ 263 (353)
T 4a6d_A 191 GALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ-EEEQ---IDFQEGDFFKDP--LPEADLYILARVLHDWADGKCS 263 (353)
T ss_dssp SHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCS---EEEEESCTTTSC--CCCCSEEEEESSGGGSCHHHHH
T ss_pred CHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc-ccCc---eeeecCccccCC--CCCceEEEeeeecccCCHHHHH
Confidence 555554444467788888887 89999999998763 5566 999999987642 245899999998876553
Q ss_pred ----HHHhhCCCCcEEEEEec
Q psy14971 78 ----EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 ----~l~~~L~pGGrLv~~~~ 94 (156)
.+.+.|+|||+|++...
T Consensus 264 ~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 264 HLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp HHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHhhCCCCCEEEEEEe
Confidence 45788999999999753
No 237
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.17 E-value=3.6e-06 Score=62.63 Aligned_cols=81 Identities=15% Similarity=0.190 Sum_probs=57.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC-C-CCCCCcCEEEEccCCCchH---
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG-H-AEEGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~-~-~~~~~fD~I~i~~~~~~i~--- 76 (156)
|.++......+ .+|+++|+++++++.|++++ .+++.+|+.+. . ...++||.|++.....+++
T Consensus 44 G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~~-----------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~ 110 (230)
T 3cc8_A 44 GALGAAIKENG--TRVSGIEAFPEAAEQAKEKL-----------DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPW 110 (230)
T ss_dssp SHHHHHHHTTT--CEEEEEESSHHHHHHHHTTS-----------SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHH
T ss_pred CHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC-----------CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCHH
Confidence 55554333333 89999999999999888543 34677887642 1 2246899999988876653
Q ss_pred ---HHHHhhCCCCcEEEEEecc
Q psy14971 77 ---KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~~ 95 (156)
..+.+.|+|||++++....
T Consensus 111 ~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 111 AVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp HHHHHTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEeCC
Confidence 3457889999999997643
No 238
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.17 E-value=1.1e-06 Score=73.14 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=54.5
Q ss_pred HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC------CCCcCEEEEccCCCchH---
Q psy14971 6 VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE------EGPYDIIHLGAACIEVP--- 76 (156)
Q Consensus 6 ~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~------~~~fD~I~i~~~~~~i~--- 76 (156)
.+++...|.++|+++|++++|. . ...| ++++++|+.+.... .++||+|+++++. ..+
T Consensus 239 ~la~~~fP~a~V~GVDiSp~m~-------~---~~~r---I~fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH-~~~d~~ 304 (419)
T 3sso_A 239 RMWKSFFPRGQIYGLDIMDKSH-------V---DELR---IRTIQGDQNDAEFLDRIARRYGPFDIVIDDGSH-INAHVR 304 (419)
T ss_dssp HHHHHHCTTCEEEEEESSCCGG-------G---CBTT---EEEEECCTTCHHHHHHHHHHHCCEEEEEECSCC-CHHHHH
T ss_pred HHHHHhCCCCEEEEEECCHHHh-------h---cCCC---cEEEEecccccchhhhhhcccCCccEEEECCcc-cchhHH
Confidence 3555556789999999999972 1 2256 99999998763111 4789999998753 322
Q ss_pred ---HHHHhhCCCCcEEEEEe
Q psy14971 77 ---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|||||++++..
T Consensus 305 ~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 305 TSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEe
Confidence 45789999999999964
No 239
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.16 E-value=4e-06 Score=67.58 Aligned_cols=84 Identities=12% Similarity=0.036 Sum_probs=58.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|.++.......|..+++++|+ ++++. +++++. .+..++ ++++.+|..+..+ +||+|++....++.++
T Consensus 196 G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~-~~~~~~--v~~~~~d~~~~~p---~~D~v~~~~vlh~~~d~~~~ 266 (348)
T 3lst_A 196 GGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDA-PDVAGR--WKVVEGDFLREVP---HADVHVLKRILHNWGDEDSV 266 (348)
T ss_dssp SHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCC-GGGTTS--EEEEECCTTTCCC---CCSEEEEESCGGGSCHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEecC-HHHhh--cccccc-cCCCCC--eEEEecCCCCCCC---CCcEEEEehhccCCCHHHHH
Confidence 556644333346689999999 55555 444443 243333 9999999875444 7999999998876553
Q ss_pred ----HHHhhCCCCcEEEEEec
Q psy14971 78 ----EILAQLKPGGRLVFHKG 94 (156)
Q Consensus 78 ----~l~~~L~pGGrLv~~~~ 94 (156)
.+.+.|||||+|++...
T Consensus 267 ~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 267 RILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp HHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEEe
Confidence 46789999999999654
No 240
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.15 E-value=6e-06 Score=65.18 Aligned_cols=65 Identities=14% Similarity=0.022 Sum_probs=48.7
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCCCCCCCcCEEEEccCCC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~ 73 (156)
.|.++......+ ++|+++|+++++++.|+++++. .+. ++ ++++.+|+.+.. ...||.|+++.+..
T Consensus 39 ~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~-~~~~~~---v~~~~~D~~~~~--~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 39 TGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQG-TPVASK---LQVLVGDVLKTD--LPFFDTCVANLPYQ 104 (285)
T ss_dssp TSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTT-STTGGG---EEEEESCTTTSC--CCCCSEEEEECCGG
T ss_pred ccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHh-cCCCCc---eEEEEcceeccc--chhhcEEEEecCcc
Confidence 366665433223 6999999999999999999976 355 46 999999987632 23799999976653
No 241
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.14 E-value=2.7e-06 Score=67.90 Aligned_cols=85 Identities=14% Similarity=0.113 Sum_probs=54.1
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh--cCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch--
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLN--IKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV-- 75 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~--~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i-- 75 (156)
+|.++. +++. | .++|+|+|++++|++.+.++-.+. +...| ++....+ .++ ..+||.|+++.+...+
T Consensus 96 TG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~n---i~~l~~~---~l~-~~~fD~v~~d~sf~sl~~ 166 (291)
T 3hp7_A 96 TGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYN---FRYAEPV---DFT-EGLPSFASIDVSFISLNL 166 (291)
T ss_dssp TSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHTCTTEEEECSCC---GGGCCGG---GCT-TCCCSEEEECCSSSCGGG
T ss_pred ccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHhCcccceecccC---ceecchh---hCC-CCCCCEEEEEeeHhhHHH
Confidence 477774 4444 3 379999999999998865432210 11112 2211111 112 2359999999887654
Q ss_pred -HHHHHhhCCCCcEEEEEec
Q psy14971 76 -PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 -~~~l~~~L~pGGrLv~~~~ 94 (156)
...+.+.|+|||+|++.+.
T Consensus 167 vL~e~~rvLkpGG~lv~lvk 186 (291)
T 3hp7_A 167 ILPALAKILVDGGQVVALVK 186 (291)
T ss_dssp THHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHcCcCCEEEEEEC
Confidence 4678999999999999743
No 242
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.13 E-value=2.8e-05 Score=57.46 Aligned_cols=64 Identities=17% Similarity=0.048 Sum_probs=50.5
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~ 73 (156)
.|.++..+...+. .+|+++|+++++++.|++|++.. ++ + ++++.+|+.+ ++ .+||+|+++.+..
T Consensus 60 ~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~~-~---~~~~~~d~~~-~~--~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 60 TGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEF-KG-K---FKVFIGDVSE-FN--SRVDIVIMNPPFG 123 (207)
T ss_dssp TCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGG-TT-S---EEEEESCGGG-CC--CCCSEEEECCCCS
T ss_pred CCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHc-CC-C---EEEEECchHH-cC--CCCCEEEEcCCCc
Confidence 3666665444443 58999999999999999999984 76 7 9999999876 33 4799999998743
No 243
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.11 E-value=6e-06 Score=61.90 Aligned_cols=67 Identities=15% Similarity=0.075 Sum_probs=53.2
Q ss_pred EEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH------HHHHhhCCCCcEEEE
Q psy14971 18 LILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP------KEILAQLKPGGRLVF 91 (156)
Q Consensus 18 ~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~------~~l~~~L~pGGrLv~ 91 (156)
+++|+++++++.|+++ + ++++.+|+.+.....+.||+|++......++ ..+.+.|+|||++++
T Consensus 69 ~~vD~s~~~~~~a~~~--------~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 69 IGVEPSERMAEIARKR--------G---VFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp EEEESCHHHHHHHHHT--------T---CEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEE
T ss_pred hccCCCHHHHHHHHhc--------C---CEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEE
Confidence 9999999999998866 3 7788999865433346899999998776543 456789999999999
Q ss_pred Eecc
Q psy14971 92 HKGL 95 (156)
Q Consensus 92 ~~~~ 95 (156)
....
T Consensus 138 ~~~~ 141 (219)
T 1vlm_A 138 GIVD 141 (219)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 7653
No 244
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.10 E-value=4.1e-06 Score=69.98 Aligned_cols=75 Identities=16% Similarity=0.117 Sum_probs=59.2
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCC--CccceEEEEccCCCCCCCCCCcCEEEEccCCCc------------------
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQN--RKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------------------ 74 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~--n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------------------ 74 (156)
..++|+|+++.+++.|+.|+..+ |+. + +.++++|...... ...||+|+.+.+...
T Consensus 209 ~~i~G~Ei~~~~~~lA~~nl~l~-g~~~~~---~~i~~gD~l~~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~ 283 (445)
T 2okc_A 209 KALHGVDNTPLVVTLASMNLYLH-GIGTDR---SPIVCEDSLEKEP-STLVDVILANPPFGTRPAGSVDINRPDFYVETK 283 (445)
T ss_dssp TTEEEEESCHHHHHHHHHHHHHT-TCCSSC---CSEEECCTTTSCC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCS
T ss_pred eEEEEEeCCHHHHHHHHHHHHHh-CCCcCC---CCEeeCCCCCCcc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCc
Confidence 68999999999999999999874 764 5 7899999876433 348999999865431
Q ss_pred -----hHHHHHhhCCCCcEEEEEec
Q psy14971 75 -----VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 -----i~~~l~~~L~pGGrLv~~~~ 94 (156)
.-..+.+.|+|||++++++.
T Consensus 284 ~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 284 NNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chHHHHHHHHHHHhccCCEEEEEEC
Confidence 12456789999999988764
No 245
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.08 E-value=2.8e-06 Score=60.29 Aligned_cols=79 Identities=13% Similarity=0.076 Sum_probs=56.9
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--------CCCCCcCEEEEccCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--------AEEGPYDIIHLGAAC 72 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--------~~~~~fD~I~i~~~~ 72 (156)
|.++. ++...++..+|+++|+++ +++ ..+ ++++.+|..+.. ...++||.|+++...
T Consensus 34 G~~~~~l~~~~~~~~~v~~~D~~~-~~~-----------~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~ 98 (180)
T 1ej0_A 34 GGWSQYVVTQIGGKGRIIACDLLP-MDP-----------IVG---VDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAP 98 (180)
T ss_dssp CHHHHHHHHHHCTTCEEEEEESSC-CCC-----------CTT---EEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CHHHHHHHHHhCCCCeEEEEECcc-ccc-----------cCc---EEEEEcccccchhhhhhhccCCCCceeEEEECCCc
Confidence 55554 455557778999999998 642 146 899999987642 234689999998765
Q ss_pred Cc-----------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 73 IE-----------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 73 ~~-----------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
.. +...+.+.|+|||++++....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 99 NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 42 223567899999999996653
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.08 E-value=2e-05 Score=61.61 Aligned_cols=81 Identities=10% Similarity=-0.096 Sum_probs=63.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|-|++.+. +..+++++|+|+.+++.+++++.. .| .+ .++.++|.....+. ++||.+++.-..+.+.+
T Consensus 117 gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~-~g-~~---~~~~v~D~~~~~~~-~~~DvvLllk~lh~LE~q~~~ 187 (253)
T 3frh_A 117 NPLALYER---GIASVWGCDIHQGLGDVITPFARE-KD-WD---FTFALQDVLCAPPA-EAGDLALIFKLLPLLEREQAG 187 (253)
T ss_dssp THHHHHHT---TCSEEEEEESBHHHHHHHHHHHHH-TT-CE---EEEEECCTTTSCCC-CBCSEEEEESCHHHHHHHSTT
T ss_pred cHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHh-cC-CC---ceEEEeecccCCCC-CCcchHHHHHHHHHhhhhchh
Confidence 44444433 679999999999999999999988 47 46 89999998876554 58999999877766542
Q ss_pred ---HHHhhCCCCcEEEE
Q psy14971 78 ---EILAQLKPGGRLVF 91 (156)
Q Consensus 78 ---~l~~~L~pGGrLv~ 91 (156)
.+.+.|+++|.+|.
T Consensus 188 ~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 188 SAMALLQSLNTPRMAVS 204 (253)
T ss_dssp HHHHHHHHCBCSEEEEE
T ss_pred hHHHHHHHhcCCCEEEE
Confidence 57889999876665
No 247
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.08 E-value=3.6e-06 Score=65.90 Aligned_cols=76 Identities=9% Similarity=0.070 Sum_probs=53.3
Q ss_pred CEEEEEeCCH--------------HHHHHHHHHHhhh-----------c--CCCCccceEEEEccCCCCCCCC-----CC
Q psy14971 15 ALVLILNHYM--------------KVKSKNQNNKKLN-----------I--KQNRKSFKNVSVKDGSKGHAEE-----GP 62 (156)
Q Consensus 15 g~V~avD~~~--------------~~~~~A~~~l~~~-----------~--g~~n~~~v~~~~gD~~~~~~~~-----~~ 62 (156)
.+++++|.+| ++.+.|+++++.+ + +..+ ++++.||+.+.++.. .+
T Consensus 97 l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r~~~~~~~~~---l~l~~GDa~~~l~~~~~~~~~~ 173 (257)
T 2qy6_A 97 LHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVT---LDLWFGDINELISQLDDSLNQK 173 (257)
T ss_dssp EEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEEEEEC--CEE---EEEEESCHHHHGGGSCGGGTTC
T ss_pred eEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhheeccCCceE---EEEEECcHHHHHhhcccccCCe
Confidence 4899999987 4555777776541 1 1235 889999997755432 37
Q ss_pred cCEEEEccCCC-c--------hHHHHHhhCCCCcEEEEEe
Q psy14971 63 YDIIHLGAACI-E--------VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 63 fD~I~i~~~~~-~--------i~~~l~~~L~pGGrLv~~~ 93 (156)
||+||+++-.+ . +.+.+.++|+|||+|+...
T Consensus 174 ~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 174 VDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 99999997432 1 2346789999999999744
No 248
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.03 E-value=1.9e-05 Score=62.94 Aligned_cols=65 Identities=12% Similarity=0.060 Sum_probs=50.2
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~ 73 (156)
.|.++...... .++|+++|+|+++++.++++++. .+| ++++++|+.+......+||+|+.+.+..
T Consensus 61 ~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~---~~~---v~vi~gD~l~~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 61 KGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL---YNN---IEIIWGDALKVDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp TSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH---CSS---EEEEESCTTTSCGGGSCCSEEEEECCGG
T ss_pred chHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc---CCC---eEEEECchhhCCcccCCccEEEEeCccc
Confidence 47777643333 37999999999999999999875 257 9999999987444446799999876653
No 249
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.00 E-value=5.2e-06 Score=69.20 Aligned_cols=66 Identities=14% Similarity=0.011 Sum_probs=51.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhc--CCCCccceEEEEccCCCCCCC--CCCcCEEEEccCC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNI--KQNRKSFKNVSVKDGSKGHAE--EGPYDIIHLGAAC 72 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~--g~~n~~~v~~~~gD~~~~~~~--~~~fD~I~i~~~~ 72 (156)
+|..++.+... .++|+++|+++++++.|++|++. + |++| ++++++|+.+.++. ..+||.||++.+.
T Consensus 104 ~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~-~~~gl~~---i~~i~~Da~~~L~~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 104 LGIDFIALMSK--ASQGIYIERNDETAVAARHNIPL-LLNEGKD---VNILTGDFKEYLPLIKTFHPDYIYVDPAR 173 (410)
T ss_dssp SSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHH-HSCTTCE---EEEEESCGGGSHHHHHHHCCSEEEECCEE
T ss_pred chHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHH-hccCCCc---EEEEECcHHHhhhhccCCCceEEEECCCC
Confidence 36666543333 47999999999999999999998 6 7767 99999998764332 2579999998643
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.99 E-value=1.4e-05 Score=63.53 Aligned_cols=64 Identities=16% Similarity=0.053 Sum_probs=45.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~ 73 (156)
|.++..... ..++|+++|+++++++.|+++++. .+.+| ++++.+|+.+.. .+.||+|+++.+..
T Consensus 54 G~lt~~La~--~~~~v~~vDi~~~~~~~a~~~~~~-~~~~~---v~~~~~D~~~~~--~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 54 GNLTVKLLP--LAKKVITIDIDSRMISEVKKRCLY-EGYNN---LEVYEGDAIKTV--FPKFDVCTANIPYK 117 (299)
T ss_dssp STTHHHHTT--TSSEEEEECSCHHHHHHHHHHHHH-TTCCC---EEC----CCSSC--CCCCSEEEEECCGG
T ss_pred cHHHHHHHh--cCCEEEEEECCHHHHHHHHHHHHH-cCCCc---eEEEECchhhCC--cccCCEEEEcCCcc
Confidence 555543322 247999999999999999999987 37778 999999987632 24799999987654
No 251
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.96 E-value=4.6e-05 Score=67.36 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=60.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC--CCCcCEEEEccCCCc-------hHH------HH
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE--EGPYDIIHLGAACIE-------VPK------EI 79 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~--~~~fD~I~i~~~~~~-------i~~------~l 79 (156)
.+|+|+|+++++++.|++|++.+ |+.+. +++..+|+.+.... .+.||.|+++.+... +.+ ..
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~a-gv~~~--i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~ 333 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLA-GIGEL--ITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRI 333 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHT-TCGGG--EEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHc-CCCCc--eEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHH
Confidence 68999999999999999999995 88654 99999998764322 237999999976431 111 23
Q ss_pred HhhCCCCcEEEEEecc
Q psy14971 80 LAQLKPGGRLVFHKGL 95 (156)
Q Consensus 80 ~~~L~pGGrLv~~~~~ 95 (156)
++.+.|||++++..+.
T Consensus 334 lk~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 334 MKNQFGGWNLSLFSAS 349 (703)
T ss_dssp HHHHCTTCEEEEEESC
T ss_pred HHhhCCCCeEEEEeCC
Confidence 5566799999998763
No 252
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.90 E-value=1.2e-05 Score=59.84 Aligned_cols=76 Identities=12% Similarity=0.021 Sum_probs=51.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-----------CCCcCEEEEcc
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-----------EGPYDIIHLGA 70 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-----------~~~fD~I~i~~ 70 (156)
|.++..+... .++|+++|+++. . ...+ ++++.+|+.+.... .++||+|++++
T Consensus 37 G~~s~~la~~--~~~V~gvD~~~~---------~---~~~~---v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~ 99 (191)
T 3dou_A 37 GGWTQVLNSL--ARKIISIDLQEM---------E---EIAG---VRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDA 99 (191)
T ss_dssp CHHHHHHTTT--CSEEEEEESSCC---------C---CCTT---CEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECC
T ss_pred CHHHHHHHHc--CCcEEEEecccc---------c---cCCC---eEEEEccccCHHHHHHHHHHhhcccCCcceEEecCC
Confidence 5556443322 589999999974 1 2356 99999998763210 03899999998
Q ss_pred CCCc-----------------hHHHHHhhCCCCcEEEEEec
Q psy14971 71 ACIE-----------------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 71 ~~~~-----------------i~~~l~~~L~pGGrLv~~~~ 94 (156)
+... +.....+.|||||+|++-+-
T Consensus 100 ~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 100 MAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 6431 11234689999999998664
No 253
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.88 E-value=1.7e-05 Score=57.94 Aligned_cols=78 Identities=15% Similarity=0.080 Sum_probs=53.4
Q ss_pred chHHH-HHHhcCCC--------CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEE-EccCCCCC--------CCCCCc
Q psy14971 2 GDLNV-IVGIKGER--------ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVS-VKDGSKGH--------AEEGPY 63 (156)
Q Consensus 2 G~la~-la~l~g~~--------g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~-~gD~~~~~--------~~~~~f 63 (156)
|.++. +++..++. ++|+++|+++.. ...+ ++++ .+|..... ....+|
T Consensus 34 G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------------~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~f 98 (196)
T 2nyu_A 34 GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------------PLEG---ATFLCPADVTDPRTSQRILEVLPGRRA 98 (196)
T ss_dssp CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------------CCTT---CEEECSCCTTSHHHHHHHHHHSGGGCE
T ss_pred CHHHHHHHHHhccccccccCCCceEEEEechhcc------------cCCC---CeEEEeccCCCHHHHHHHHHhcCCCCC
Confidence 66665 45565653 899999999831 2346 8888 88876421 113479
Q ss_pred CEEEEccCCCc-----------------hHHHHHhhCCCCcEEEEEec
Q psy14971 64 DIIHLGAACIE-----------------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 64 D~I~i~~~~~~-----------------i~~~l~~~L~pGGrLv~~~~ 94 (156)
|+|+++.+... +...+.+.|||||++++...
T Consensus 99 D~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 99 DVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 99999775431 12346789999999999764
No 254
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.87 E-value=2.8e-05 Score=63.29 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=58.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......|..+++++|+ +++++.|++ ..+ ++++.+|..+..+. + |+|++....++.+
T Consensus 215 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~---v~~~~~d~~~~~p~-~--D~v~~~~vlh~~~~~~~~ 280 (368)
T 3reo_A 215 GAVASMIVAKYPSINAINFDL-PHVIQDAPA-------FSG---VEHLGGDMFDGVPK-G--DAIFIKWICHDWSDEHCL 280 (368)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTT---EEEEECCTTTCCCC-C--SEEEEESCGGGBCHHHHH
T ss_pred CHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-------cCC---CEEEecCCCCCCCC-C--CEEEEechhhcCCHHHHH
Confidence 556654333446789999999 888876652 146 99999999875553 3 9999999887554
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|+|||+|++...
T Consensus 281 ~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 281 KLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp HHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEEe
Confidence 346789999999999654
No 255
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.81 E-value=3.7e-05 Score=61.88 Aligned_cols=79 Identities=11% Similarity=0.033 Sum_probs=58.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......|..+|+++|+ +++++.|++ ..+ ++++.+|..+..+ .||+|++....++.+
T Consensus 200 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~---v~~~~~d~~~~~p---~~D~v~~~~~lh~~~d~~~~ 265 (352)
T 1fp2_A 200 GTTAKIICETFPKLKCIVFDR-PQVVENLSG-------SNN---LTYVGGDMFTSIP---NADAVLLKYILHNWTDKDCL 265 (352)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------BTT---EEEEECCTTTCCC---CCSEEEEESCGGGSCHHHHH
T ss_pred cHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-------CCC---cEEEeccccCCCC---CccEEEeehhhccCCHHHHH
Confidence 555543333346689999999 999887763 136 9999999876443 399999999887654
Q ss_pred ---HHHHhhCCC---CcEEEEEec
Q psy14971 77 ---KEILAQLKP---GGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~p---GGrLv~~~~ 94 (156)
..+.+.||| ||+|++...
T Consensus 266 ~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 266 RILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEe
Confidence 246789999 999998753
No 256
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.80 E-value=3.8e-05 Score=61.39 Aligned_cols=67 Identities=10% Similarity=-0.001 Sum_probs=51.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CC--CCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AE--EGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~--~~~fD~I~i~~~~~~ 74 (156)
|..+. ++...+ .++|+++|+++++++.|++|++. .| .+ ++++++|..+.. .. ..+||.|+++.+++.
T Consensus 38 G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~-~g-~~---v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 38 GGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKE-FS-DR---VSLFKVSYREADFLLKTLGIEKVDGILMDLGVST 110 (301)
T ss_dssp SHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGG-GT-TT---EEEEECCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred CHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHh-cC-Cc---EEEEECCHHHHHHHHHhcCCCCCCEEEEcCccch
Confidence 55665 444543 68999999999999999999988 47 67 999999976521 11 147999999988754
No 257
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.80 E-value=3.3e-05 Score=62.67 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=58.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......+..+++++|+ +++++.|++ ..+ ++++.+|..+..+ .||+|++....++++
T Consensus 221 G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-------~~~---v~~~~~d~~~~~~---~~D~v~~~~~lh~~~d~~~~ 286 (372)
T 1fp1_D 221 GRNLELIISKYPLIKGINFDL-PQVIENAPP-------LSG---IEHVGGDMFASVP---QGDAMILKAVCHNWSDEKCI 286 (372)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTT---EEEEECCTTTCCC---CEEEEEEESSGGGSCHHHHH
T ss_pred cHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-------cCC---CEEEeCCcccCCC---CCCEEEEecccccCCHHHHH
Confidence 555544333456789999999 999877653 146 9999999876433 299999999887654
Q ss_pred ---HHHHhhCCCCcEEEEEe
Q psy14971 77 ---KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~ 93 (156)
..+.+.|+|||+|++..
T Consensus 287 ~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 287 EFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 34678999999999874
No 258
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.79 E-value=6.4e-06 Score=64.37 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=50.5
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCH-------HHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC--C--CCcCEEEEc
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYM-------KVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE--E--GPYDIIHLG 69 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~-------~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~--~--~~fD~I~i~ 69 (156)
.|.+++.+... +++|+++|+++ ++++.|++|++.+ ++.|+ ++++++|+.+..+. . .+||+|+++
T Consensus 94 ~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~-~~~~r--i~~~~~d~~~~l~~~~~~~~~fD~V~~d 168 (258)
T 2r6z_A 94 LGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQ-DTAAR--INLHFGNAAEQMPALVKTQGKPDIVYLD 168 (258)
T ss_dssp TCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHH-HHHTT--EEEEESCHHHHHHHHHHHHCCCSEEEEC
T ss_pred cCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhh-CCccC--eEEEECCHHHHHHhhhccCCCccEEEEC
Confidence 47777654444 37999999999 9999999998774 55343 99999998763321 1 579999998
Q ss_pred cCCC
Q psy14971 70 AACI 73 (156)
Q Consensus 70 ~~~~ 73 (156)
.+.+
T Consensus 169 P~~~ 172 (258)
T 2r6z_A 169 PMYP 172 (258)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 7543
No 259
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.78 E-value=4.8e-05 Score=61.84 Aligned_cols=79 Identities=15% Similarity=0.048 Sum_probs=58.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP----- 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~----- 76 (156)
|.++.......|..+++++|+ +++++.|++ .++ ++++.+|..+..+. + |+|++...+++.+
T Consensus 213 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~---v~~~~~D~~~~~p~-~--D~v~~~~vlh~~~d~~~~ 278 (364)
T 3p9c_A 213 GATVAAIAAHYPTIKGVNFDL-PHVISEAPQ-------FPG---VTHVGGDMFKEVPS-G--DTILMKWILHDWSDQHCA 278 (364)
T ss_dssp SHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTT---EEEEECCTTTCCCC-C--SEEEEESCGGGSCHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-------cCC---eEEEeCCcCCCCCC-C--CEEEehHHhccCCHHHHH
Confidence 555543333346789999999 888876652 146 99999999875553 3 9999999887654
Q ss_pred ---HHHHhhCCCCcEEEEEec
Q psy14971 77 ---KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~ 94 (156)
..+.+.|||||+|++...
T Consensus 279 ~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 279 TLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp HHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEEe
Confidence 246789999999999654
No 260
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.78 E-value=6.1e-05 Score=55.41 Aligned_cols=61 Identities=21% Similarity=0.125 Sum_probs=45.5
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCch
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i 75 (156)
|.++..+...+ ..+|+++|+++++++.|++|++ + ++++.+|+.+ ++ .+||.|+++.+....
T Consensus 63 G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~------~---~~~~~~d~~~-~~--~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 63 GILACGSYLLG-AESVTAFDIDPDAIETAKRNCG------G---VNFMVADVSE-IS--GKYDTWIMNPPFGSV 123 (200)
T ss_dssp CHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHCT------T---SEEEECCGGG-CC--CCEEEEEECCCC---
T ss_pred cHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhcC------C---CEEEECcHHH-CC--CCeeEEEECCCchhc
Confidence 66665443333 3689999999999999998864 4 8899999876 33 579999999875433
No 261
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.76 E-value=1.5e-05 Score=68.64 Aligned_cols=85 Identities=15% Similarity=0.113 Sum_probs=64.1
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchHH--
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVPK-- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~~-- 77 (156)
|.++...+..| +.|+|||.++++++.|+.+.... |..+ |+++++++.+.. .+.+.||+|++...++++++
T Consensus 78 G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~~~-~~~~---~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~ 151 (569)
T 4azs_A 78 GFFSLSLASKG--ATIVGIDFQQENINVCRALAEEN-PDFA---AEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLH 151 (569)
T ss_dssp SHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTS-TTSE---EEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHH
T ss_pred cHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHHhc-CCCc---eEEEECCHHHHhhhccCCCccEEEECcchhcCCCHH
Confidence 67775433444 79999999999999999998773 6557 999999986532 13468999999999988874
Q ss_pred ------HHHhhCCCCcEEEEE
Q psy14971 78 ------EILAQLKPGGRLVFH 92 (156)
Q Consensus 78 ------~l~~~L~pGGrLv~~ 92 (156)
.++..|+++|+.++.
T Consensus 152 ~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 152 GIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp CHHHHHHHHHHHHHHSSEEEE
T ss_pred HHHHHHHHHHHhccccceeeE
Confidence 345667777766553
No 262
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.71 E-value=2.6e-06 Score=70.04 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=50.9
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH------HHHHhhCCCCc
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP------KEILAQLKPGG 87 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~------~~l~~~L~pGG 87 (156)
+.+|+++|+++++++.|+++ +.... ...+..+++.......++||+|++....++++ ..+.+.|||||
T Consensus 129 g~~v~gvD~s~~~~~~a~~~-----~~~~~-~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG 202 (416)
T 4e2x_A 129 GVRHLGFEPSSGVAAKAREK-----GIRVR-TDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDG 202 (416)
T ss_dssp TCEEEEECCCHHHHHHHHTT-----TCCEE-CSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHc-----CCCcc-eeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCe
Confidence 36999999999999999876 11110 01122233221111247899999999988775 35688999999
Q ss_pred EEEEEec
Q psy14971 88 RLVFHKG 94 (156)
Q Consensus 88 rLv~~~~ 94 (156)
+|++...
T Consensus 203 ~l~i~~~ 209 (416)
T 4e2x_A 203 VFVFEDP 209 (416)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 9999753
No 263
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.67 E-value=2.2e-05 Score=62.70 Aligned_cols=82 Identities=9% Similarity=-0.151 Sum_probs=51.8
Q ss_pred chHHHHHHhcCCCCEEEEEeC----CHHHHHHHHHHHhhhcCCCCccceEEEEc-cCCCCCCCCCCcCEEEEccCCC---
Q psy14971 2 GDLNVIVGIKGERALVLILNH----YMKVKSKNQNNKKLNIKQNRKSFKNVSVK-DGSKGHAEEGPYDIIHLGAACI--- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~----~~~~~~~A~~~l~~~~g~~n~~~v~~~~g-D~~~~~~~~~~fD~I~i~~~~~--- 73 (156)
|.++..+... ++|+++|+ ++.+++.+ ..+. ++.++ ++++.+ |+... + ..+||+|+++++..
T Consensus 94 G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~--~~~~-~~~~~---v~~~~~~D~~~l-~-~~~fD~V~sd~~~~~g~ 162 (305)
T 2p41_A 94 GGWSYYCGGL---KNVREVKGLTKGGPGHEEPI--PMST-YGWNL---VRLQSGVDVFFI-P-PERCDTLLCDIGESSPN 162 (305)
T ss_dssp SHHHHHHHTS---TTEEEEEEECCCSTTSCCCC--CCCS-TTGGG---EEEECSCCTTTS-C-CCCCSEEEECCCCCCSS
T ss_pred CHHHHHHHhc---CCEEEEeccccCchhHHHHH--Hhhh-cCCCC---eEEEeccccccC-C-cCCCCEEEECCccccCc
Confidence 5555433222 68999999 55433211 1122 23356 999999 88753 3 35899999998763
Q ss_pred ch---------HHHHHhhCCCCcEEEEEec
Q psy14971 74 EV---------PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 74 ~i---------~~~l~~~L~pGGrLv~~~~ 94 (156)
.. ...+.+.|||||++++-+-
T Consensus 163 ~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 163 PTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred chhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 11 1234588999999998654
No 264
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.61 E-value=8.3e-05 Score=63.81 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=57.8
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCC----ccceEEEEccCCCCC-CCCCCcCEEEEccCCCc---------------
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNR----KSFKNVSVKDGSKGH-AEEGPYDIIHLGAACIE--------------- 74 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n----~~~v~~~~gD~~~~~-~~~~~fD~I~i~~~~~~--------------- 74 (156)
..++|+|+++.+++.|+.|+..+ |..+ . +.++++|..... .....||+|+.+.+...
T Consensus 212 ~~i~GiEid~~~~~lA~~nl~l~-gi~~~~~~~--~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~ 288 (541)
T 2ar0_A 212 RAFIGLELVPGTRRLALMNCLLH-DIEGNLDHG--GAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTS 288 (541)
T ss_dssp TSEEEEESCHHHHHHHHHHHHTT-TCCCBGGGT--BSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCS
T ss_pred ceEEEEcCCHHHHHHHHHHHHHh-CCCcccccc--CCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCC
Confidence 47999999999999999999763 6542 1 568999986532 22467999999876431
Q ss_pred -----hHHHHHhhCCCCcEEEEEec
Q psy14971 75 -----VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 -----i~~~l~~~L~pGGrLv~~~~ 94 (156)
.-..+.+.|+|||++++++.
T Consensus 289 ~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 289 NKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chHHHHHHHHHHHhCCCCEEEEEec
Confidence 12345789999999998864
No 265
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.59 E-value=0.0008 Score=57.79 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=58.8
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCC--CCccceEEEEccCCCC-CC--CCCCcCEEEEccCCCc--------------
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQ--NRKSFKNVSVKDGSKG-HA--EEGPYDIIHLGAACIE-------------- 74 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~--~n~~~v~~~~gD~~~~-~~--~~~~fD~I~i~~~~~~-------------- 74 (156)
...++|+|+++.+++.|+.|+..+ |+ ++ +.+.++|.... |+ ....||+|+.+.+...
T Consensus 248 ~~~i~G~Eid~~~~~lA~~Nl~l~-gi~~~~---~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf 323 (542)
T 3lkd_A 248 TVVYFGQELNTSTYNLARMNMILH-GVPIEN---QFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRF 323 (542)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHT-TCCGGG---EEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTT
T ss_pred CceEEEEECcHHHHHHHHHHHHHc-CCCcCc---cceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhh
Confidence 578999999999999999999874 76 46 89999998754 22 2467999999854310
Q ss_pred -----hH----------HHHHhhCC-CCcEEEEEec
Q psy14971 75 -----VP----------KEILAQLK-PGGRLVFHKG 94 (156)
Q Consensus 75 -----i~----------~~l~~~L~-pGGrLv~~~~ 94 (156)
+| ....+.|+ +||++++++.
T Consensus 324 ~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 324 SPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp GGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred hhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 11 23568899 9999988764
No 266
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.57 E-value=3.4e-05 Score=63.62 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=55.9
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhh----cCC---CCccceEEEEccCCCCCC----CCCCcCEEEEccCCC---chH--
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLN----IKQ---NRKSFKNVSVKDGSKGHA----EEGPYDIIHLGAACI---EVP-- 76 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~----~g~---~n~~~v~~~~gD~~~~~~----~~~~fD~I~i~~~~~---~i~-- 76 (156)
+..+|+.+|+|+++++.|++.+... +.. ++ ++++.+|+.+-+. ....||+|+++..-. ..|
T Consensus 227 ~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~r---v~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g 303 (381)
T 3c6k_A 227 KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDC---YQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEE 303 (381)
T ss_dssp CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETT---EEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC---
T ss_pred CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccc---eeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccC
Confidence 4579999999999999999987531 111 23 8999999865332 245799999995321 111
Q ss_pred -----------HHHHhhCCCCcEEEEEec
Q psy14971 77 -----------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 77 -----------~~l~~~L~pGGrLv~~~~ 94 (156)
+.+.+.|+|||+++.-.+
T Consensus 304 ~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 304 DSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp -CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 245688999999998654
No 267
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.56 E-value=8.2e-05 Score=65.10 Aligned_cols=70 Identities=16% Similarity=0.021 Sum_probs=52.6
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCC-----CchHH---HHHhhCCCCc
Q psy14971 16 LVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAAC-----IEVPK---EILAQLKPGG 87 (156)
Q Consensus 16 ~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~-----~~i~~---~l~~~L~pGG 87 (156)
+|+|||.++ ++..|++..+.+ +.+++ |++++||..+... ..+.|+|++.-.- +.+|+ ..-+.|||||
T Consensus 387 kVyAVEknp-~A~~a~~~v~~N-~~~dk--VtVI~gd~eev~L-PEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgG 461 (637)
T 4gqb_A 387 KLYAVEKNP-NAVVTLENWQFE-EWGSQ--VTVVSSDMREWVA-PEKADIIVSELLGSFADNELSPECLDGAQHFLKDDG 461 (637)
T ss_dssp EEEEEESCH-HHHHHHHHHHHH-TTGGG--EEEEESCTTTCCC-SSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEE
T ss_pred EEEEEECCH-HHHHHHHHHHhc-cCCCe--EEEEeCcceeccC-CcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCc
Confidence 799999996 788999998886 77665 9999999987432 3679999995421 12343 3357899999
Q ss_pred EEE
Q psy14971 88 RLV 90 (156)
Q Consensus 88 rLv 90 (156)
+++
T Consensus 462 imi 464 (637)
T 4gqb_A 462 VSI 464 (637)
T ss_dssp EEE
T ss_pred EEc
Confidence 863
No 268
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.48 E-value=0.0002 Score=57.64 Aligned_cols=79 Identities=10% Similarity=0.045 Sum_probs=57.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHH----
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPK---- 77 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~---- 77 (156)
|.++.......|..+++++|+ +.+++.|++ ..+ ++++.+|..+..+ .||+|++....++.++
T Consensus 205 G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~---v~~~~~d~~~~~~---~~D~v~~~~vlh~~~d~~~~ 270 (358)
T 1zg3_A 205 GGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-------NEN---LNFVGGDMFKSIP---SADAVLLKWVLHDWNDEQSL 270 (358)
T ss_dssp SHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-------CSS---EEEEECCTTTCCC---CCSEEEEESCGGGSCHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEecc-HHHHhhccc-------CCC---cEEEeCccCCCCC---CceEEEEcccccCCCHHHHH
Confidence 555544333356689999999 788866553 246 9999999876333 4999999988876542
Q ss_pred ----HHHhhCCC---CcEEEEEec
Q psy14971 78 ----EILAQLKP---GGRLVFHKG 94 (156)
Q Consensus 78 ----~l~~~L~p---GGrLv~~~~ 94 (156)
.+.+.|+| ||+|++...
T Consensus 271 ~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 271 KILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp HHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred HHHHHHHHhCCCCCCCcEEEEEEe
Confidence 46789999 999998643
No 269
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.46 E-value=0.00017 Score=56.23 Aligned_cols=63 Identities=10% Similarity=-0.002 Sum_probs=45.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-C---CCCcCEEEEccCC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-E---EGPYDIIHLGAAC 72 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~---~~~fD~I~i~~~~ 72 (156)
.|.++...... .++|+++|+|++|++.++++++. .+| ++++++|+.+... + ..+|| |+.+-+.
T Consensus 40 ~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~---~~~---v~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 40 RGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQ---QKN---ITIYQNDALQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp TTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTT---CTT---EEEEESCTTTCCGGGSCCSSCEE-EEEECCH
T ss_pred ccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhh---CCC---cEEEEcchHhCCHHHhccCCCeE-EEecCCc
Confidence 36666543332 37999999999999999999875 257 9999999987432 2 24687 6665443
No 270
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.45 E-value=8.9e-05 Score=58.03 Aligned_cols=69 Identities=12% Similarity=0.086 Sum_probs=49.3
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh-----c-C-C-CCccceEEEEccCCCCCCC-CCCcCEEEEccC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN-----I-K-Q-NRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAA 71 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~-----~-g-~-~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~ 71 (156)
.|..++.+...| ++|+++|+++.+++.+++++++. + + + ++ ++++++|+.+.++. ..+||+|+++.+
T Consensus 99 ~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~---i~~~~~D~~~~L~~~~~~fDvV~lDP~ 173 (258)
T 2oyr_A 99 LGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQER---LQLIHASSLTALTDITPRPQVVYLDPM 173 (258)
T ss_dssp TCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHH---EEEEESCHHHHSTTCSSCCSEEEECCC
T ss_pred CCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcC---EEEEECCHHHHHHhCcccCCEEEEcCC
Confidence 367776544444 68999999999999888887652 0 1 2 35 99999998653332 236999999987
Q ss_pred CCc
Q psy14971 72 CIE 74 (156)
Q Consensus 72 ~~~ 74 (156)
.+.
T Consensus 174 y~~ 176 (258)
T 2oyr_A 174 FPH 176 (258)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 271
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.41 E-value=0.00011 Score=60.06 Aligned_cols=80 Identities=19% Similarity=0.080 Sum_probs=56.7
Q ss_pred chHHHH-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC---c---
Q psy14971 2 GDLNVI-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI---E--- 74 (156)
Q Consensus 2 G~la~l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~---~--- 74 (156)
|.+++. ++..++..+|+|+|+++++++.| .+ ++++++|..+. .....||+|+++.+.. .
T Consensus 51 G~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~---~~~~~~D~~~~-~~~~~fD~Ii~NPPy~~~~~~~~ 116 (421)
T 2ih2_A 51 GPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PW---AEGILADFLLW-EPGEAFDLILGNPPYGIVGEASK 116 (421)
T ss_dssp CHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TT---EEEEESCGGGC-CCSSCEEEEEECCCCCCBSCTTT
T ss_pred hHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CC---CcEEeCChhhc-CccCCCCEEEECcCccCcccccc
Confidence 555543 44555568999999999988766 24 88999998763 3346899999974321 0
Q ss_pred -----------------------------hHHHHHhhCCCCcEEEEEecc
Q psy14971 75 -----------------------------VPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 75 -----------------------------i~~~l~~~L~pGGrLv~~~~~ 95 (156)
+-+.+.+.|+|||++++.+..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 117 YPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 122456899999999998653
No 272
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.34 E-value=0.00043 Score=54.41 Aligned_cols=64 Identities=11% Similarity=0.010 Sum_probs=48.2
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACI 73 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~ 73 (156)
.|.++......+ ++|+++|+|++|++.+++++.. .| ++++++|+.+... +...||.|+.+-+..
T Consensus 57 ~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~----~~---v~vi~~D~l~~~~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 57 LGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSG----LP---VRLVFQDALLYPWEEVPQGSLLVANLPYH 121 (271)
T ss_dssp TSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTT----SS---EEEEESCGGGSCGGGSCTTEEEEEEECSS
T ss_pred hHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCC----CC---EEEEECChhhCChhhccCccEEEecCccc
Confidence 477775433333 7999999999999999998763 46 9999999976432 223689999887664
No 273
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.33 E-value=0.0002 Score=52.99 Aligned_cols=61 Identities=21% Similarity=0.163 Sum_probs=45.8
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-----hHHHHHhhCCCCcEE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE-----VPKEILAQLKPGGRL 89 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~-----i~~~l~~~L~pGGrL 89 (156)
.+|+++|+++. + ++++.+|+.+.....++||+|++....+. +...+.+.|+|||++
T Consensus 87 ~~v~~~D~s~~----------------~---~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l 147 (215)
T 2zfu_A 87 NPVHCFDLASL----------------D---PRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLL 147 (215)
T ss_dssp SCEEEEESSCS----------------S---TTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEE
T ss_pred ccEEEEeCCCC----------------C---ceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEE
Confidence 68999999987 2 45778888763333568999999887652 224568899999999
Q ss_pred EEEec
Q psy14971 90 VFHKG 94 (156)
Q Consensus 90 v~~~~ 94 (156)
++...
T Consensus 148 ~i~~~ 152 (215)
T 2zfu_A 148 KVAEV 152 (215)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99653
No 274
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.28 E-value=0.0002 Score=61.51 Aligned_cols=77 Identities=12% Similarity=0.012 Sum_probs=57.3
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC-CCCCCcCEEEEccCCCc-------------------
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH-AEEGPYDIIHLGAACIE------------------- 74 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~-~~~~~fD~I~i~~~~~~------------------- 74 (156)
..++|+|+++.+++.|+.|+..+ |++.. +.+.+||..... .....||+|+.+.+...
T Consensus 284 ~~i~G~Eid~~~~~lA~~Nl~l~-gi~~~--i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~ 360 (544)
T 3khk_A 284 ISVYGQESNPTTWKLAAMNMVIR-GIDFN--FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTN 360 (544)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHT-TCCCB--CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHHh-CCCcc--cceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcc
Confidence 58999999999999999999874 76432 555889976532 22468999999865431
Q ss_pred ------hH----------HHHHhhCCCCcEEEEEec
Q psy14971 75 ------VP----------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 ------i~----------~~l~~~L~pGGrLv~~~~ 94 (156)
+| ..+.+.|+|||++++++.
T Consensus 361 ~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 361 GEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp --CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 22 245789999999888764
No 275
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.16 E-value=4.9e-05 Score=59.93 Aligned_cols=83 Identities=12% Similarity=0.002 Sum_probs=51.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhh-h-cCCCCccceEEE--EccCCCCCCCCCCcCEEEEccCCC--c-
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKL-N-IKQNRKSFKNVS--VKDGSKGHAEEGPYDIIHLGAACI--E- 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~-~-~g~~n~~~v~~~--~gD~~~~~~~~~~fD~I~i~~~~~--~- 74 (156)
|.++..+... ++|+++|+++ |+..|+++... . ++ .| ++++ .+|+.+ ++ ..+||.|+++.+.. .
T Consensus 94 G~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~---v~~~~~~~D~~~-l~-~~~fD~Vvsd~~~~~~~~ 163 (276)
T 2wa2_A 94 GSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFG-WN---LITFKSKVDVTK-ME-PFQADTVLCDIGESNPTA 163 (276)
T ss_dssp CHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTT-GG---GEEEECSCCGGG-CC-CCCCSEEEECCCCCCSCH
T ss_pred CHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcC-CC---eEEEeccCcHhh-CC-CCCcCEEEECCCcCCCch
Confidence 5555433222 7999999998 64433322110 0 11 15 8999 899875 33 46899999987611 0
Q ss_pred ---------hHHHHHhhCCCCc--EEEEEec
Q psy14971 75 ---------VPKEILAQLKPGG--RLVFHKG 94 (156)
Q Consensus 75 ---------i~~~l~~~L~pGG--rLv~~~~ 94 (156)
+-+.+.+.||||| ++++-+-
T Consensus 164 ~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 164 AVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred hhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 1233567899999 8888553
No 276
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.16 E-value=6e-05 Score=59.04 Aligned_cols=82 Identities=9% Similarity=-0.058 Sum_probs=51.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHH---hhhcCCCCccceEEE--EccCCCCCCCCCCcCEEEEccCCC--c
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNK---KLNIKQNRKSFKNVS--VKDGSKGHAEEGPYDIIHLGAACI--E 74 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l---~~~~g~~n~~~v~~~--~gD~~~~~~~~~~fD~I~i~~~~~--~ 74 (156)
|.++..+... ++|+++|+++ |+..++++. +. .+ .| +.++ .+|+.+ ++ ..+||+|+++.+.. .
T Consensus 86 G~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~-~~-~~---v~~~~~~~D~~~-l~-~~~fD~V~sd~~~~~~~ 154 (265)
T 2oxt_A 86 GGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITES-YG-WN---IVKFKSRVDIHT-LP-VERTDVIMCDVGESSPK 154 (265)
T ss_dssp SHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCB-TT-GG---GEEEECSCCTTT-SC-CCCCSEEEECCCCCCSC
T ss_pred CHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhc-cC-CC---eEEEecccCHhH-CC-CCCCcEEEEeCcccCCc
Confidence 5555433222 7999999998 543332211 11 12 15 8999 899876 33 46899999987611 0
Q ss_pred ----------hHHHHHhhCCCCc--EEEEEec
Q psy14971 75 ----------VPKEILAQLKPGG--RLVFHKG 94 (156)
Q Consensus 75 ----------i~~~l~~~L~pGG--rLv~~~~ 94 (156)
+.+.+.+.|+||| .+++-+-
T Consensus 155 ~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 155 WSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred cchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 1233568899999 8988553
No 277
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.13 E-value=0.0033 Score=48.16 Aligned_cols=61 Identities=15% Similarity=0.022 Sum_probs=43.3
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEcc
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGA 70 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~ 70 (156)
.|.++......+ ++|+++|+++++++.|+++++. . ++ ++++.+|+.+.... ..+| .|+.+.
T Consensus 41 ~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~-~--~~---v~~~~~D~~~~~~~~~~~~-~vv~nl 102 (244)
T 1qam_A 41 KGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD-H--DN---FQVLNKDILQFKFPKNQSY-KIFGNI 102 (244)
T ss_dssp TSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT-C--CS---EEEECCCGGGCCCCSSCCC-EEEEEC
T ss_pred chHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc-C--CC---eEEEEChHHhCCcccCCCe-EEEEeC
Confidence 367775433333 7999999999999999999865 2 57 99999998764222 2345 455554
No 278
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.00 E-value=7.6e-06 Score=62.86 Aligned_cols=85 Identities=13% Similarity=-0.048 Sum_probs=58.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCC-------
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACI------- 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~------- 73 (156)
|.++..+...+ ++|+++|+++++++.|+++++. .++ ++++.+|+.+.... .++| .|+++.+..
T Consensus 41 G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~---~~~---v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~ 111 (245)
T 1yub_A 41 GHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL---NTR---VTLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIK 111 (245)
T ss_dssp SSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT---CSE---EEECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHH
T ss_pred CHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc---CCc---eEEEECChhhcCcccCCCc-EEEEeCCccccHHHHH
Confidence 55665433333 7999999999999999988753 246 99999999764322 3568 666654321
Q ss_pred ----------chH----HHHHhhCCCCcEEEEEecc
Q psy14971 74 ----------EVP----KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 74 ----------~i~----~~l~~~L~pGGrLv~~~~~ 95 (156)
.+. +...+.|+|||+|++....
T Consensus 112 ~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 112 KVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp HHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTTT
T ss_pred HHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhee
Confidence 111 4567899999998886654
No 279
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.63 E-value=0.0046 Score=55.62 Aligned_cols=77 Identities=4% Similarity=-0.061 Sum_probs=51.7
Q ss_pred CEEEEEeCCHHHHHHH--HHHHhhh---cCCCCccceEEEEccCCCCC-CCCCCcCEEEEccCCCc---h----------
Q psy14971 15 ALVLILNHYMKVKSKN--QNNKKLN---IKQNRKSFKNVSVKDGSKGH-AEEGPYDIIHLGAACIE---V---------- 75 (156)
Q Consensus 15 g~V~avD~~~~~~~~A--~~~l~~~---~g~~n~~~v~~~~gD~~~~~-~~~~~fD~I~i~~~~~~---i---------- 75 (156)
..++|+|+++.+++.| +.|+..+ .+..+ ..+...|..... .....||+|+.+-+... .
T Consensus 349 ~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~---~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r 425 (878)
T 3s1s_A 349 RQIWANDIETLFLELLSIRLGLLFPQLVSSNNA---PTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHK 425 (878)
T ss_dssp GGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBC---CEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCc---ceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHH
Confidence 6799999999999999 6666431 13333 455555554321 12467999999887621 0
Q ss_pred ----------------------HHHHHhhCCCCcEEEEEec
Q psy14971 76 ----------------------PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 ----------------------~~~l~~~L~pGGrLv~~~~ 94 (156)
-....+.|++||++++.+.
T Consensus 426 ~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 426 IIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp HHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 0124678999999999865
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=96.41 E-value=0.0019 Score=50.04 Aligned_cols=64 Identities=9% Similarity=-0.038 Sum_probs=44.1
Q ss_pred CchHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC-CCC----CCcCEEEEccCC
Q psy14971 1 MGDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH-AEE----GPYDIIHLGAAC 72 (156)
Q Consensus 1 ~G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~-~~~----~~fD~I~i~~~~ 72 (156)
+|.++. +.. +...+|+++|++++|++.++++++. . +| ++++++|+.+.. ++. ...|.|+.+.+.
T Consensus 32 ~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~-~--~~---v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 32 LAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL-G--PK---LTIYQQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp TTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT-G--GG---EEEECSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred CcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc-C--Cc---eEEEECchhhCCHHHhhcccCCceEEEECCCC
Confidence 477888 543 3223399999999999999998865 2 46 999999987632 211 134566666554
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.29 E-value=0.0037 Score=55.37 Aligned_cols=72 Identities=15% Similarity=0.034 Sum_probs=48.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-----CCCcCEEEEccCC----Cc-hHH---HHHh
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-----EGPYDIIHLGAAC----IE-VPK---EILA 81 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-----~~~fD~I~i~~~~----~~-i~~---~l~~ 81 (156)
.+|+|||.++......+.... + |+.++ |+++.||..+.... ..+.|+|++.-.- .+ .|+ ...+
T Consensus 447 ~kVyAVEknp~A~~~l~~~~~-N-g~~d~--VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r 522 (745)
T 3ua3_A 447 VKLYIVEKNPNAIVTLKYMNV-R-TWKRR--VTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTG 522 (745)
T ss_dssp EEEEEEECCHHHHHHHHHHHH-H-TTTTC--SEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGG
T ss_pred cEEEEEeCChHHHHHHHHHHh-c-CCCCe--EEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHH
Confidence 499999999876655554444 3 66555 99999999763221 3679999996542 12 222 3347
Q ss_pred hCCCCcEEE
Q psy14971 82 QLKPGGRLV 90 (156)
Q Consensus 82 ~L~pGGrLv 90 (156)
.|||||+++
T Consensus 523 ~Lkp~Gi~i 531 (745)
T 3ua3_A 523 FLKPTTISI 531 (745)
T ss_dssp GSCTTCEEE
T ss_pred hCCCCcEEE
Confidence 899999754
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=96.13 E-value=0.0067 Score=47.67 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=36.4
Q ss_pred CchHHH-HHHhcCC-CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC
Q psy14971 1 MGDLNV-IVGIKGE-RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG 56 (156)
Q Consensus 1 ~G~la~-la~l~g~-~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~ 56 (156)
.|.++. +++.... .++|+++|++++|++.++++. . .| ++++++|+.+.
T Consensus 53 ~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~----~~---v~~i~~D~~~~ 102 (279)
T 3uzu_A 53 LGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-G----EL---LELHAGDALTF 102 (279)
T ss_dssp TSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G----GG---EEEEESCGGGC
T ss_pred cHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C----CC---cEEEECChhcC
Confidence 477775 4444433 356999999999999999984 2 36 99999998764
No 283
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.07 E-value=0.0067 Score=48.06 Aligned_cols=82 Identities=9% Similarity=-0.021 Sum_probs=59.5
Q ss_pred HHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----CCCCCcCEEEEccCCCc---hH-
Q psy14971 5 NVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----AEEGPYDIIHLGAACIE---VP- 76 (156)
Q Consensus 5 a~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----~~~~~fD~I~i~~~~~~---i~- 76 (156)
++-.+++....+++.+|.+++..+.-++|++.. ++ ++++.+|+...+ +...+||.||++-+... +.
T Consensus 104 aLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~---~~---~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~ 177 (283)
T 2oo3_A 104 YFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN---KK---VYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKE 177 (283)
T ss_dssp HHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT---SC---EEEECSCHHHHHHHHCSCTTSCEEEEECCCCCSTTHHHH
T ss_pred HHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC---Cc---EEEEeCcHHHHHHHhcCCCCCccEEEECCCCCCCcHHHH
Confidence 344455555689999999999999999998752 45 999999986532 23346999999998762 22
Q ss_pred --HHHH--hhCCCCcEEEEE
Q psy14971 77 --KEIL--AQLKPGGRLVFH 92 (156)
Q Consensus 77 --~~l~--~~L~pGGrLv~~ 92 (156)
+.+. ..+.++|.+++=
T Consensus 178 vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 178 IPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp HHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHhCccCCCeEEEEE
Confidence 2232 356789999883
No 284
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.00 E-value=0.012 Score=47.82 Aligned_cols=64 Identities=20% Similarity=0.151 Sum_probs=47.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CCC---CCcCEEEEccCCC
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AEE---GPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~~---~~fD~I~i~~~~~ 73 (156)
|+...+++.+++.|+|+|+|+|+++++.|+ ++ .-++ +++++++..+.. ... +++|.|+.+-+++
T Consensus 70 GHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~R---v~lv~~nF~~l~~~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 70 GHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPR---FSIIHGPFSALGEYVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTT---EEEEESCGGGHHHHHHHTTCTTCEEEEEEECSCC
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCc---EEEEeCCHHHHHHHHHhcCCCCcccEEEECCccC
Confidence 455567888899999999999999999994 44 2245 999999875421 111 3699999998765
No 285
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.86 E-value=0.049 Score=46.48 Aligned_cols=55 Identities=9% Similarity=-0.080 Sum_probs=43.3
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC-C---CCCCcCEEEEccCCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH-A---EEGPYDIIHLGAACI 73 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~-~---~~~~fD~I~i~~~~~ 73 (156)
..++|+|+++.+...|+.|+-.+ |.++ ..+..+|..... . ....||+|+.+.+..
T Consensus 255 ~~i~G~E~~~~~~~la~mNl~lh-g~~~---~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 255 SSIFGGEAKSLPYLLVQMNLLLH-GLEY---PRIDPENSLRFPLREMGDKDRVDVILTNPPFG 313 (530)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHH-TCSC---CEEECSCTTCSCGGGCCGGGCBSEEEECCCSS
T ss_pred hhhhhhhccHHHHHHHHHHHHhc-CCcc---ccccccccccCchhhhcccccceEEEecCCCC
Confidence 46999999999999999999875 7766 678899976421 1 235799999998763
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=95.58 E-value=0.0088 Score=47.41 Aligned_cols=61 Identities=13% Similarity=-0.045 Sum_probs=45.6
Q ss_pred HHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC---CCC--CCCcCEEEEccCCCchH
Q psy14971 5 NVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG---HAE--EGPYDIIHLGAACIEVP 76 (156)
Q Consensus 5 a~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~---~~~--~~~fD~I~i~~~~~~i~ 76 (156)
..+++. +++|+|+|.|+++++.|++ ++. ++ +++++++..+. +.. ..++|.|+.+-+++.+.
T Consensus 38 ~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~r---v~lv~~~f~~l~~~L~~~g~~~vDgIL~DLGvSS~Q 103 (285)
T 1wg8_A 38 RGILER---GGRVIGLDQDPEAVARAKG-LHL----PG---LTVVQGNFRHLKRHLAALGVERVDGILADLGVSSFH 103 (285)
T ss_dssp HHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TT---EEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCHHH
T ss_pred HHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CC---EEEEECCcchHHHHHHHcCCCCcCEEEeCCcccccc
Confidence 345554 5899999999999999998 743 46 99999997652 111 24799999988876543
No 287
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=95.52 E-value=0.054 Score=41.62 Aligned_cols=51 Identities=12% Similarity=-0.073 Sum_probs=36.2
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCC
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAAC 72 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~ 72 (156)
.++|+++|+|+++++.++++ .. .| ++++++|+.+... +......|+.+-+.
T Consensus 54 ~~~v~avEid~~~~~~~~~~-~~----~~---v~~i~~D~~~~~~~~~~~~~~vv~NlPy 105 (249)
T 3ftd_A 54 LKKLYVIELDREMVENLKSI-GD----ER---LEVINEDASKFPFCSLGKELKVVGNLPY 105 (249)
T ss_dssp CSEEEEECCCHHHHHHHTTS-CC----TT---EEEECSCTTTCCGGGSCSSEEEEEECCT
T ss_pred CCeEEEEECCHHHHHHHHhc-cC----CC---eEEEEcchhhCChhHccCCcEEEEECch
Confidence 47999999999999999988 32 46 9999999976432 21112255555554
No 288
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.48 E-value=0.059 Score=42.93 Aligned_cols=80 Identities=11% Similarity=0.040 Sum_probs=50.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC---CC---C---CCCcCEEEEccC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG---HA---E---EGPYDIIHLGAA 71 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~---~~---~---~~~fD~I~i~~~ 71 (156)
|.+++ +|+..| .+|++++.+++.++.++ . +|.+. + +-..|..+. .. . ...+|.||-..+
T Consensus 181 G~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~-lGa~~---~-~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g 249 (352)
T 1e3j_A 181 GLVSVLAAKAYG--AFVVCTARSPRRLEVAK----N-CGADV---T-LVVDPAKEEESSIIERIRSAIGDLPNVTIDCSG 249 (352)
T ss_dssp HHHHHHHHHHTT--CEEEEEESCHHHHHHHH----H-TTCSE---E-EECCTTTSCHHHHHHHHHHHSSSCCSEEEECSC
T ss_pred HHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----H-hCCCE---E-EcCcccccHHHHHHHHhccccCCCCCEEEECCC
Confidence 34443 455565 57999999999888776 3 36432 2 211110110 00 0 246999998877
Q ss_pred CCchHHHHHhhCCCCcEEEEE
Q psy14971 72 CIEVPKEILAQLKPGGRLVFH 92 (156)
Q Consensus 72 ~~~i~~~l~~~L~pGGrLv~~ 92 (156)
........++.|+++|+++..
T Consensus 250 ~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 250 NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CHHHHHHHHHHSCTTCEEEEC
T ss_pred CHHHHHHHHHHHhcCCEEEEE
Confidence 655556778999999999875
No 289
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.35 E-value=0.059 Score=42.84 Aligned_cols=76 Identities=18% Similarity=0.114 Sum_probs=52.6
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
|.+++ +|+..| .+|++++.+++..+.+++ +|.+. + + .|.. .+. ..+|.||-..+.....+..+
T Consensus 189 G~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~---v-~--~~~~-~~~--~~~D~vid~~g~~~~~~~~~ 252 (348)
T 3two_A 189 GSMAVKYAVAMG--AEVSVFARNEHKKQDALS-----MGVKH---F-Y--TDPK-QCK--EELDFIISTIPTHYDLKDYL 252 (348)
T ss_dssp HHHHHHHHHHTT--CEEEEECSSSTTHHHHHH-----TTCSE---E-E--SSGG-GCC--SCEEEEEECCCSCCCHHHHH
T ss_pred HHHHHHHHHHCC--CeEEEEeCCHHHHHHHHh-----cCCCe---e-c--CCHH-HHh--cCCCEEEECCCcHHHHHHHH
Confidence 44444 456665 599999999998887753 36543 2 2 3321 122 27999998887775667788
Q ss_pred hhCCCCcEEEEEe
Q psy14971 81 AQLKPGGRLVFHK 93 (156)
Q Consensus 81 ~~L~pGGrLv~~~ 93 (156)
+.|++||+++..-
T Consensus 253 ~~l~~~G~iv~~G 265 (348)
T 3two_A 253 KLLTYNGDLALVG 265 (348)
T ss_dssp TTEEEEEEEEECC
T ss_pred HHHhcCCEEEEEC
Confidence 9999999999863
No 290
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.70 E-value=0.082 Score=42.41 Aligned_cols=70 Identities=13% Similarity=0.012 Sum_probs=46.6
Q ss_pred HHHhcCCC-CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-----------
Q psy14971 7 IVGIKGER-ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE----------- 74 (156)
Q Consensus 7 la~l~g~~-g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~----------- 74 (156)
+.++ +|. +.|+++|+.+-. . ..+ .++.||..+. ....+||+|+++.+...
T Consensus 131 Lr~~-~p~g~~VVavDL~~~~---------s---da~----~~IqGD~~~~-~~~~k~DLVISDMAPNtTG~~D~d~~Rs 192 (344)
T 3r24_A 131 LRQW-LPTGTLLVDSDLNDFV---------S---DAD----STLIGDCATV-HTANKWDLIISDMYDPRTKHVTKENDSK 192 (344)
T ss_dssp HHHH-SCTTCEEEEEESSCCB---------C---SSS----EEEESCGGGE-EESSCEEEEEECCCCTTSCSSCSCCCCC
T ss_pred HHHh-CCCCcEEEEeeCcccc---------c---CCC----eEEEcccccc-ccCCCCCEEEecCCCCcCCccccchhHH
Confidence 3444 665 699999998631 1 112 3499997652 33578999999986531
Q ss_pred --hH----HHHHhhCCCCcEEEEEec
Q psy14971 75 --VP----KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 --i~----~~l~~~L~pGGrLv~~~~ 94 (156)
+- +-..+.|+|||-+++=+-
T Consensus 193 ~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 193 EGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp CTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 11 234678999999999653
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=93.59 E-value=0.25 Score=40.53 Aligned_cols=66 Identities=9% Similarity=-0.085 Sum_probs=44.0
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc--h---HHHHHhhCCCCcE
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE--V---PKEILAQLKPGGR 88 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~--i---~~~l~~~L~pGGr 88 (156)
+++|+|||+.+ |.. .+.. ..+ |+++.+|+....+..++||.|+++.+..- + ...|...+..++.
T Consensus 233 g~~V~aVD~~~-l~~----~l~~---~~~---V~~~~~d~~~~~~~~~~~D~vvsDm~~~p~~~~~l~~~wl~~~~~~~a 301 (375)
T 4auk_A 233 NMWVYSVDNGP-MAQ----SLMD---TGQ---VTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRET 301 (375)
T ss_dssp TCEEEEECSSC-CCH----HHHT---TTC---EEEECSCTTTCCCCSSCEEEEEECCSSCHHHHHHHHHHHHHTTSCSEE
T ss_pred CCEEEEEEhhh-cCh----hhcc---CCC---eEEEeCccccccCCCCCcCEEEEcCCCChHHhHHHHHHHHhccccceE
Confidence 58999999763 221 2222 256 99999999876666678999999998752 2 2345555554454
Q ss_pred EE
Q psy14971 89 LV 90 (156)
Q Consensus 89 Lv 90 (156)
++
T Consensus 302 I~ 303 (375)
T 4auk_A 302 IF 303 (375)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 292
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.49 E-value=0.12 Score=41.13 Aligned_cols=83 Identities=10% Similarity=-0.017 Sum_probs=52.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEc-----cCCCC---CCCCCCcCEEEEccCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVK-----DGSKG---HAEEGPYDIIHLGAAC 72 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~g-----D~~~~---~~~~~~fD~I~i~~~~ 72 (156)
|.+++ +|+..|. ..|+++|.+++.++.+++. .. . - +..... |..+. ......+|.||-..+.
T Consensus 192 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l-~~--~--~---~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~ 262 (363)
T 3m6i_A 192 GLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI-CP--E--V---VTHKVERLSAEESAKKIVESFGGIEPAVALECTGV 262 (363)
T ss_dssp HHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH-CT--T--C---EEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCC
T ss_pred HHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh-ch--h--c---ccccccccchHHHHHHHHHHhCCCCCCEEEECCCC
Confidence 44444 4566652 3499999999999999876 32 1 1 222211 10000 0113469999988876
Q ss_pred CchHHHHHhhCCCCcEEEEEe
Q psy14971 73 IEVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 73 ~~i~~~l~~~L~pGGrLv~~~ 93 (156)
+......++.|++||+++..-
T Consensus 263 ~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 263 ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HHHHHHHHHHSCTTCEEEECC
T ss_pred hHHHHHHHHHhcCCCEEEEEc
Confidence 656667789999999999853
No 293
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=92.92 E-value=0.016 Score=45.16 Aligned_cols=49 Identities=12% Similarity=0.057 Sum_probs=37.4
Q ss_pred eEEEEccCCCCCCC------CCCcCEEEEccCCC-c---hHHHHHhhCCCCcEEEEEec
Q psy14971 46 KNVSVKDGSKGHAE------EGPYDIIHLGAACI-E---VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 46 v~~~~gD~~~~~~~------~~~fD~I~i~~~~~-~---i~~~l~~~L~pGGrLv~~~~ 94 (156)
|+++.|++.+.++. ..+||.+++++..- . .-+.+...|+|||.+++..-
T Consensus 160 i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 160 SVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp EEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred EEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 99999998765432 34699999999862 1 23567899999999999653
No 294
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.89 E-value=0.022 Score=45.34 Aligned_cols=83 Identities=7% Similarity=-0.030 Sum_probs=51.8
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEE---ccCCCCCCCCCCcCEEEEccCCCchHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSV---KDGSKGHAEEGPYDIIHLGAACIEVPK 77 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~---gD~~~~~~~~~~fD~I~i~~~~~~i~~ 77 (156)
|.+++ +|+...++.+|++++.+++.++.+++ +|.+. + +-. .|..+.......+|.||-..+.....+
T Consensus 183 G~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-----lGa~~---v-i~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~ 253 (344)
T 2h6e_A 183 AVYTIQILKALMKNITIVGISRSKKHRDFALE-----LGADY---V-SEMKDAESLINKLTDGLGASIAIDLVGTEETTY 253 (344)
T ss_dssp HHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-----HTCSE---E-ECHHHHHHHHHHHHTTCCEEEEEESSCCHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-----hCCCE---E-eccccchHHHHHhhcCCCccEEEECCCChHHHH
Confidence 34443 46666223689999999998887764 25432 1 111 111001111236999998887765666
Q ss_pred HHHhhCCCCcEEEEEe
Q psy14971 78 EILAQLKPGGRLVFHK 93 (156)
Q Consensus 78 ~l~~~L~pGGrLv~~~ 93 (156)
..++.|++||+++..-
T Consensus 254 ~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 254 NLGKLLAQEGAIILVG 269 (344)
T ss_dssp HHHHHEEEEEEEEECC
T ss_pred HHHHHhhcCCEEEEeC
Confidence 7789999999998743
No 295
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.82 E-value=0.16 Score=39.78 Aligned_cols=79 Identities=18% Similarity=0.118 Sum_probs=49.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVPKE 78 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~~~ 78 (156)
|.+++ +|+..| ++|++++.+++..+.+++ +|.+. .+-..+... .. ..+.+|.+|-..+.+ ..+.
T Consensus 160 G~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~----vi~~~~~~~-~~~~~~~~~d~v~d~~g~~-~~~~ 226 (324)
T 3nx4_A 160 GSTAVALLHKLG--YQVAAVSGRESTHGYLKS-----LGANR----ILSRDEFAE-SRPLEKQLWAGAIDTVGDK-VLAK 226 (324)
T ss_dssp HHHHHHHHHHTT--CCEEEEESCGGGHHHHHH-----HTCSE----EEEGGGSSC-CCSSCCCCEEEEEESSCHH-HHHH
T ss_pred HHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh-----cCCCE----EEecCCHHH-HHhhcCCCccEEEECCCcH-HHHH
Confidence 33443 456665 599999999998888764 35432 122222111 11 124699887665543 5566
Q ss_pred HHhhCCCCcEEEEEe
Q psy14971 79 ILAQLKPGGRLVFHK 93 (156)
Q Consensus 79 l~~~L~pGGrLv~~~ 93 (156)
.++.|+++|+++..-
T Consensus 227 ~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 227 VLAQMNYGGCVAACG 241 (324)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred HHHHHhcCCEEEEEe
Confidence 788999999999854
No 296
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.75 E-value=0.1 Score=41.30 Aligned_cols=78 Identities=13% Similarity=0.128 Sum_probs=51.8
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-----CCCCcCEEEEccCCCch
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-----EEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-----~~~~fD~I~i~~~~~~i 75 (156)
|.+++ +|+..| .+|+++|.+++.++.+++ +|.+. ++..+.. .+. ..+.+|.++.+......
T Consensus 179 G~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~-----~i~~~~~-~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 179 GHVAVQYARAMG--LRVAAVDIDDAKLNLARR-----LGAEV-----AVNARDT-DPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp HHHHHHHHHHTT--CEEEEEESCHHHHHHHHH-----TTCSE-----EEETTTS-CHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred HHHHHHHHHHCC--CeEEEEeCCHHHHHHHHH-----cCCCE-----EEeCCCc-CHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 55554 456665 599999999998887753 35432 1221111 111 11368999988776666
Q ss_pred HHHHHhhCCCCcEEEEE
Q psy14971 76 PKEILAQLKPGGRLVFH 92 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~ 92 (156)
.+..++.|++||+++..
T Consensus 246 ~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 246 FSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HHHHHHHEEEEEEEEEC
T ss_pred HHHHHHHhccCCEEEEe
Confidence 77888999999999875
No 297
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.67 E-value=0.06 Score=43.39 Aligned_cols=78 Identities=15% Similarity=0.253 Sum_probs=50.6
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEcc--CCCCCCCCCCcCEEEEccCCCchHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKD--GSKGHAEEGPYDIIHLGAACIEVPKE 78 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD--~~~~~~~~~~fD~I~i~~~~~~i~~~ 78 (156)
|.+++ +|+..| ++|++++.+++.++.+++ +|.+. + +-..+ ..+... ..+|.||-..+.....+.
T Consensus 207 G~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~-----lGa~~---v-i~~~~~~~~~~~~--~g~Dvvid~~g~~~~~~~ 273 (369)
T 1uuf_A 207 GHMGIKLAHAMG--AHVVAFTTSEAKREAAKA-----LGADE---V-VNSRNADEMAAHL--KSFDFILNTVAAPHNLDD 273 (369)
T ss_dssp HHHHHHHHHHTT--CEEEEEESSGGGHHHHHH-----HTCSE---E-EETTCHHHHHTTT--TCEEEEEECCSSCCCHHH
T ss_pred HHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH-----cCCcE---E-eccccHHHHHHhh--cCCCEEEECCCCHHHHHH
Confidence 44444 455555 579999999998888764 25432 1 11111 001111 469999988877666667
Q ss_pred HHhhCCCCcEEEEE
Q psy14971 79 ILAQLKPGGRLVFH 92 (156)
Q Consensus 79 l~~~L~pGGrLv~~ 92 (156)
.++.|+++|+++..
T Consensus 274 ~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 274 FTTLLKRDGTMTLV 287 (369)
T ss_dssp HHTTEEEEEEEEEC
T ss_pred HHHHhccCCEEEEe
Confidence 78999999999874
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.60 E-value=0.32 Score=37.98 Aligned_cols=34 Identities=9% Similarity=-0.030 Sum_probs=28.3
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhh
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLN 37 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~ 37 (156)
|-+++.|...| .+++++|+++++++.|++|++..
T Consensus 247 Gt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 247 GTTLIAAARWG--RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp THHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHHh
Confidence 55666666665 69999999999999999999873
No 299
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.50 E-value=0.045 Score=44.00 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=50.3
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEcc-CCC---CCCCCCCcCEEEEccCCCchH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKD-GSK---GHAEEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD-~~~---~~~~~~~fD~I~i~~~~~~i~ 76 (156)
|.+++ +|+..+ +.+|++++.+++.++.+++ +|.+. + +-..+ ..+ .. ....+|.||-..+.....
T Consensus 185 G~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~-----lGad~---v-i~~~~~~~~~v~~~-~~~g~Dvvid~~g~~~~~ 253 (363)
T 4dvj_A 185 GSIAVQIARQRT-DLTVIATASRPETQEWVKS-----LGAHH---V-IDHSKPLAAEVAAL-GLGAPAFVFSTTHTDKHA 253 (363)
T ss_dssp HHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH-----TTCSE---E-ECTTSCHHHHHHTT-CSCCEEEEEECSCHHHHH
T ss_pred HHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH-----cCCCE---E-EeCCCCHHHHHHHh-cCCCceEEEECCCchhhH
Confidence 44444 344433 3799999999998887753 36432 1 11111 000 01 234699998876655566
Q ss_pred HHHHhhCCCCcEEEEE
Q psy14971 77 KEILAQLKPGGRLVFH 92 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~ 92 (156)
+..++.|++||+++..
T Consensus 254 ~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 254 AEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHHHHSCTTCEEEEC
T ss_pred HHHHHHhcCCCEEEEE
Confidence 7788999999999986
No 300
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.30 E-value=0.31 Score=38.91 Aligned_cols=81 Identities=10% Similarity=0.106 Sum_probs=51.0
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC---CCC--CCCCcCEEEEccCCCch
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK---GHA--EEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~---~~~--~~~~fD~I~i~~~~~~i 75 (156)
|.+++ +|+..|. .+|+++|.+++.++.+++ +|.+. ++..+..+ ... ..+.+|.||-..+....
T Consensus 203 G~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a~~-----lGa~~-----vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~ 271 (371)
T 1f8f_A 203 GLSALLAAKVCGA-SIIIAVDIVESRLELAKQ-----LGATH-----VINSKTQDPVAAIKEITDGGVNFALESTGSPEI 271 (371)
T ss_dssp HHHHHHHHHHHTC-SEEEEEESCHHHHHHHHH-----HTCSE-----EEETTTSCHHHHHHHHTTSCEEEEEECSCCHHH
T ss_pred HHHHHHHHHHcCC-CeEEEECCCHHHHHHHHH-----cCCCE-----EecCCccCHHHHHHHhcCCCCcEEEECCCCHHH
Confidence 34443 4566652 379999999998888763 35432 22211111 000 11369999988776566
Q ss_pred HHHHHhhCCCCcEEEEEe
Q psy14971 76 PKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~~ 93 (156)
.+..++.|++||+++..-
T Consensus 272 ~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 272 LKQGVDALGILGKIAVVG 289 (371)
T ss_dssp HHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHhcCCEEEEeC
Confidence 667889999999998853
No 301
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.22 E-value=0.33 Score=38.94 Aligned_cols=82 Identities=18% Similarity=0.105 Sum_probs=52.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|+++|.+++.++.|+ + +|.+. + +-..+..+.+. ..+.+|.||-..+.+.
T Consensus 206 G~~a~q~a~~~Ga-~~Vi~~~~~~~~~~~a~----~-lGa~~---v-i~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~ 275 (378)
T 3uko_A 206 GLAVAEGAKTAGA-SRIIGIDIDSKKYETAK----K-FGVNE---F-VNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVS 275 (378)
T ss_dssp HHHHHHHHHHHTC-SCEEEECSCTTHHHHHH----T-TTCCE---E-ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHH
T ss_pred HHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----H-cCCcE---E-EccccCchhHHHHHHHhcCCCCCEEEECCCCHH
Confidence 44454 4566653 48999999999888775 3 46532 1 11111011110 1237999998888766
Q ss_pred hHHHHHhhCCCC-cEEEEEe
Q psy14971 75 VPKEILAQLKPG-GRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pG-GrLv~~~ 93 (156)
..+..++.|++| |+++..-
T Consensus 276 ~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 276 VMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHHHHhhccCCEEEEEc
Confidence 667788999997 9998854
No 302
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.20 E-value=0.066 Score=43.23 Aligned_cols=81 Identities=16% Similarity=0.057 Sum_probs=51.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEcc------CCCC---CCCCCCcCEEEEccC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKD------GSKG---HAEEGPYDIIHLGAA 71 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD------~~~~---~~~~~~fD~I~i~~~ 71 (156)
|.+++ +|+..|. .+|++++.+++.++.++ + +|.+. ++.-+ ..+. ......+|.||-..+
T Consensus 208 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~----~-lGa~~-----vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g 276 (380)
T 1vj0_A 208 GLFGVVIARSLGA-ENVIVIAGSPNRLKLAE----E-IGADL-----TLNRRETSVEERRKAIMDITHGRGADFILEATG 276 (380)
T ss_dssp HHHHHHHHHHTTB-SEEEEEESCHHHHHHHH----H-TTCSE-----EEETTTSCHHHHHHHHHHHTTTSCEEEEEECSS
T ss_pred HHHHHHHHHHcCC-ceEEEEcCCHHHHHHHH----H-cCCcE-----EEeccccCcchHHHHHHHHhCCCCCcEEEECCC
Confidence 33443 4555541 49999999999888776 3 36432 22211 0000 011236999998887
Q ss_pred CCchHHHHHhhCCCCcEEEEEe
Q psy14971 72 CIEVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 72 ~~~i~~~l~~~L~pGGrLv~~~ 93 (156)
........++.|++||+++..-
T Consensus 277 ~~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 277 DSRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp CTTHHHHHHHHEEEEEEEEECC
T ss_pred CHHHHHHHHHHHhcCCEEEEEe
Confidence 7666677789999999998753
No 303
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.72 E-value=0.14 Score=40.88 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=50.3
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEc-----cCCCCCCC--CCCcCEEEEccCCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVK-----DGSKGHAE--EGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~g-----D~~~~~~~--~~~fD~I~i~~~~~ 73 (156)
|.+++ +|+..|. .+|+++|.+++.++.++ + +|.+. + +-.. |..+.... ...+|.||-..+..
T Consensus 184 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~----~-lGa~~---v-i~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 253 (356)
T 1pl8_A 184 GMVTLLVAKAMGA-AQVVVTDLSATRLSKAK----E-IGADL---V-LQISKESPQEIARKVEGQLGCKPEVTIECTGAE 253 (356)
T ss_dssp HHHHHHHHHHTTC-SEEEEEESCHHHHHHHH----H-TTCSE---E-EECSSCCHHHHHHHHHHHHTSCCSEEEECSCCH
T ss_pred HHHHHHHHHHcCC-CEEEEECCCHHHHHHHH----H-hCCCE---E-EcCcccccchHHHHHHHHhCCCCCEEEECCCCh
Confidence 44444 4555552 38999999999888775 3 36432 2 1111 10000000 14699999887766
Q ss_pred chHHHHHhhCCCCcEEEEE
Q psy14971 74 EVPKEILAQLKPGGRLVFH 92 (156)
Q Consensus 74 ~i~~~l~~~L~pGGrLv~~ 92 (156)
......++.|++||+++..
T Consensus 254 ~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 254 ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEE
Confidence 5556778999999999875
No 304
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.61 E-value=0.37 Score=38.44 Aligned_cols=80 Identities=14% Similarity=0.032 Sum_probs=50.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC------CCCCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG------HAEEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~------~~~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..| ++|++++.+++.++.+++ +|.+. ++..+..+. ......+|.||-..+ ..
T Consensus 202 G~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~-----vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~~ 268 (363)
T 3uog_A 202 ALFGLQIAKATG--AEVIVTSSSREKLDRAFA-----LGADH-----GINRLEEDWVERVYALTGDRGADHILEIAG-GA 268 (363)
T ss_dssp HHHHHHHHHHTT--CEEEEEESCHHHHHHHHH-----HTCSE-----EEETTTSCHHHHHHHHHTTCCEEEEEEETT-SS
T ss_pred HHHHHHHHHHcC--CEEEEEecCchhHHHHHH-----cCCCE-----EEcCCcccHHHHHHHHhCCCCceEEEECCC-hH
Confidence 44444 455565 699999999998887653 36532 222221110 011236999998877 45
Q ss_pred hHHHHHhhCCCCcEEEEEec
Q psy14971 75 VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 i~~~l~~~L~pGGrLv~~~~ 94 (156)
.....++.|++||+++..-.
T Consensus 269 ~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 269 GLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHhhcCCEEEEEec
Confidence 55667889999999998643
No 305
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.45 E-value=0.045 Score=43.54 Aligned_cols=73 Identities=10% Similarity=0.013 Sum_probs=48.1
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCchHHHHH
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
+|+..| ++|++++.+++.++.+++ +|.+. + +..+ +.+. ....+|.||-+.+.....+..+
T Consensus 170 la~~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~---v--i~~~--~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~ 235 (346)
T 3fbg_A 170 IAKAYG--LRVITTASRNETIEWTKK-----MGADI---V--LNHK--ESLLNQFKTQGIELVDYVFCTFNTDMYYDDMI 235 (346)
T ss_dssp HHHHTT--CEEEEECCSHHHHHHHHH-----HTCSE---E--ECTT--SCHHHHHHHHTCCCEEEEEESSCHHHHHHHHH
T ss_pred HHHHcC--CEEEEEeCCHHHHHHHHh-----cCCcE---E--EECC--ccHHHHHHHhCCCCccEEEECCCchHHHHHHH
Confidence 455555 699999999998887775 25432 1 1111 1110 1246999998776555556778
Q ss_pred hhCCCCcEEEEEe
Q psy14971 81 AQLKPGGRLVFHK 93 (156)
Q Consensus 81 ~~L~pGGrLv~~~ 93 (156)
+.|+++|+++...
T Consensus 236 ~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 236 QLVKPRGHIATIV 248 (346)
T ss_dssp HHEEEEEEEEESS
T ss_pred HHhccCCEEEEEC
Confidence 9999999998754
No 306
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.34 E-value=0.027 Score=44.90 Aligned_cols=81 Identities=9% Similarity=0.082 Sum_probs=52.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC---C---CCCCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK---G---HAEEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~---~---~~~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|+++|.+++.++.+++ +|.+. ++..+..+ . ......+|.||-..+.+.
T Consensus 179 G~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~-----lGa~~-----vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~~~ 247 (352)
T 3fpc_A 179 GLMSVAGANHLGA-GRIFAVGSRKHCCDIALE-----YGATD-----IINYKNGDIVEQILKATDGKGVDKVVIAGGDVH 247 (352)
T ss_dssp HHHHHHHHHTTTC-SSEEEECCCHHHHHHHHH-----HTCCE-----EECGGGSCHHHHHHHHTTTCCEEEEEECSSCTT
T ss_pred HHHHHHHHHHcCC-cEEEEECCCHHHHHHHHH-----hCCce-----EEcCCCcCHHHHHHHHcCCCCCCEEEECCCChH
Confidence 44454 3555552 489999999998887764 35432 12111111 0 111236999998887767
Q ss_pred hHHHHHhhCCCCcEEEEEe
Q psy14971 75 VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pGGrLv~~~ 93 (156)
..+..++.|++||+++..-
T Consensus 248 ~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 248 TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp HHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCEEEEec
Confidence 7778889999999999854
No 307
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.07 E-value=0.15 Score=41.66 Aligned_cols=50 Identities=14% Similarity=0.023 Sum_probs=34.3
Q ss_pred EEEEccCCCCCCCCCCcCEEEEccCCCch---HHH-----------------------------------------HHhh
Q psy14971 47 NVSVKDGSKGHAEEGPYDIIHLGAACIEV---PKE-----------------------------------------ILAQ 82 (156)
Q Consensus 47 ~~~~gD~~~~~~~~~~fD~I~i~~~~~~i---~~~-----------------------------------------l~~~ 82 (156)
.-+-|.-...+.+..+||.|+++.+.+.+ |+. ..+.
T Consensus 135 ~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~e 214 (374)
T 3b5i_A 135 AGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAE 214 (374)
T ss_dssp EEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444456789999999998753 321 2678
Q ss_pred CCCCcEEEEEeccC
Q psy14971 83 LKPGGRLVFHKGLH 96 (156)
Q Consensus 83 L~pGGrLv~~~~~~ 96 (156)
|+|||+||+.+...
T Consensus 215 L~pGG~mvl~~~gr 228 (374)
T 3b5i_A 215 VKRGGAMFLVCLGR 228 (374)
T ss_dssp EEEEEEEEEEEEEC
T ss_pred hCCCCEEEEEEecC
Confidence 99999999987643
No 308
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.84 E-value=0.18 Score=39.33 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=45.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
|.+++ +|+..| .+|++++ +++..+.+++ +|.+. ++ -| .+.. ...+|.||-..+.... ...+
T Consensus 155 G~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~-----lGa~~-----v~-~d-~~~v--~~g~Dvv~d~~g~~~~-~~~~ 216 (315)
T 3goh_A 155 NNLLTQMLNNAG--YVVDLVS-ASLSQALAAK-----RGVRH-----LY-RE-PSQV--TQKYFAIFDAVNSQNA-AALV 216 (315)
T ss_dssp HHHHHHHHHHHT--CEEEEEC-SSCCHHHHHH-----HTEEE-----EE-SS-GGGC--CSCEEEEECC--------TTG
T ss_pred HHHHHHHHHHcC--CEEEEEE-ChhhHHHHHH-----cCCCE-----EE-cC-HHHh--CCCccEEEECCCchhH-HHHH
Confidence 44444 466666 5999999 8888777753 35432 22 24 2222 4579999876665544 5567
Q ss_pred hhCCCCcEEEEEe
Q psy14971 81 AQLKPGGRLVFHK 93 (156)
Q Consensus 81 ~~L~pGGrLv~~~ 93 (156)
+.|+++|+++..-
T Consensus 217 ~~l~~~G~~v~~g 229 (315)
T 3goh_A 217 PSLKANGHIICIQ 229 (315)
T ss_dssp GGEEEEEEEEEEC
T ss_pred HHhcCCCEEEEEe
Confidence 8999999999873
No 309
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.65 E-value=0.067 Score=42.42 Aligned_cols=81 Identities=6% Similarity=0.006 Sum_probs=52.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CC---CCCCCCcCEEEEccCCCch
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KG---HAEEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~---~~~~~~fD~I~i~~~~~~i 75 (156)
|.+++ +|+..| ..+|+++|.+++.++.+++ +|.+. ++..+.. +. ......+|.||-..+.+..
T Consensus 184 G~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~-----lGa~~-----~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~~~~ 252 (345)
T 3jv7_A 184 GHVGIQILRAVS-AARVIAVDLDDDRLALARE-----VGADA-----AVKSGAGAADAIRELTGGQGATAVFDFVGAQST 252 (345)
T ss_dssp HHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH-----TTCSE-----EEECSTTHHHHHHHHHGGGCEEEEEESSCCHHH
T ss_pred HHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH-----cCCCE-----EEcCCCcHHHHHHHHhCCCCCeEEEECCCCHHH
Confidence 44444 455664 3799999999998887753 36532 2221110 00 0112369999988877656
Q ss_pred HHHHHhhCCCCcEEEEEe
Q psy14971 76 PKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~~ 93 (156)
.+..++.|++||+++..-
T Consensus 253 ~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 253 IDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp HHHHHHHEEEEEEEEECS
T ss_pred HHHHHHHHhcCCEEEEEC
Confidence 677889999999999853
No 310
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.60 E-value=0.05 Score=43.52 Aligned_cols=81 Identities=15% Similarity=0.204 Sum_probs=50.1
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCC--CchHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAAC--IEVPK 77 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~--~~i~~ 77 (156)
|.+++ +|+..| .+|++++.+++.++.+++ +|.+. + +-..+..+.... .+.+|.||-..+. .....
T Consensus 192 G~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~---v-~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~ 260 (360)
T 1piw_A 192 GSMGTLISKAMG--AETYVISRSSRKREDAMK-----MGADH---Y-IATLEEGDWGEKYFDTFDLIVVCASSLTDIDFN 260 (360)
T ss_dssp HHHHHHHHHHHT--CEEEEEESSSTTHHHHHH-----HTCSE---E-EEGGGTSCHHHHSCSCEEEEEECCSCSTTCCTT
T ss_pred HHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH-----cCCCE---E-EcCcCchHHHHHhhcCCCEEEECCCCCcHHHHH
Confidence 34443 456665 589999999998887764 25432 2 211111010000 1469999988776 45555
Q ss_pred HHHhhCCCCcEEEEEe
Q psy14971 78 EILAQLKPGGRLVFHK 93 (156)
Q Consensus 78 ~l~~~L~pGGrLv~~~ 93 (156)
..++.|++||+++..-
T Consensus 261 ~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 261 IMPKAMKVGGRIVSIS 276 (360)
T ss_dssp TGGGGEEEEEEEEECC
T ss_pred HHHHHhcCCCEEEEec
Confidence 6788999999998743
No 311
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.55 E-value=0.41 Score=37.79 Aligned_cols=78 Identities=14% Similarity=0.110 Sum_probs=50.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC-CCCC-----CCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK-GHAE-----EGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~-~~~~-----~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..| .+|++++.+++.++.+++ +|.+. + + |..+ .+.+ .+.+|.++-..+...
T Consensus 177 G~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~---~--~--d~~~~~~~~~~~~~~~~~d~vid~~g~~~ 242 (339)
T 1rjw_A 177 GHVAVQYAKAMG--LNVVAVDIGDEKLELAKE-----LGADL---V--V--NPLKEDAAKFMKEKVGGVHAAVVTAVSKP 242 (339)
T ss_dssp HHHHHHHHHHTT--CEEEEECSCHHHHHHHHH-----TTCSE---E--E--CTTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred HHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH-----CCCCE---E--e--cCCCccHHHHHHHHhCCCCEEEECCCCHH
Confidence 44444 355555 699999999998887753 35432 1 1 2211 1100 046999998877655
Q ss_pred hHHHHHhhCCCCcEEEEEe
Q psy14971 75 VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pGGrLv~~~ 93 (156)
..+..++.|+++|+++..-
T Consensus 243 ~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 243 AFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp HHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHHhhcCCEEEEec
Confidence 6667789999999998753
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.41 E-value=0.71 Score=37.28 Aligned_cols=79 Identities=10% Similarity=-0.026 Sum_probs=48.8
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC----C---CCCCCcCEEEEccCCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG----H---AEEGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~----~---~~~~~fD~I~i~~~~~ 73 (156)
|.+++ +|+..|. .+|+++|.+++.++.++ + +|. .++.-+..+. . .....||+||-..+..
T Consensus 198 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~----~-lGa------~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~ 265 (398)
T 2dph_A 198 GRCAAAGARLLGA-ACVIVGDQNPERLKLLS----D-AGF------ETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFE 265 (398)
T ss_dssp HHHHHHHHHHHTC-SEEEEEESCHHHHHHHH----T-TTC------EEEETTSSSCHHHHHHHHHSSSCEEEEEECSCTT
T ss_pred HHHHHHHHHHcCC-CEEEEEcCCHHHHHHHH----H-cCC------cEEcCCCcchHHHHHHHHhCCCCCCEEEECCCCc
Confidence 44444 4556652 49999999999887765 3 353 1222111111 0 1123699999877654
Q ss_pred c--------------hHHHHHhhCCCCcEEEEE
Q psy14971 74 E--------------VPKEILAQLKPGGRLVFH 92 (156)
Q Consensus 74 ~--------------i~~~l~~~L~pGGrLv~~ 92 (156)
. ..+..++.|++||++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 266 AHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp CBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred cccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 3 345678899999999874
No 313
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.30 E-value=0.16 Score=40.63 Aligned_cols=82 Identities=18% Similarity=0.047 Sum_probs=51.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|+++|.+++.++.++ + +|.+. + +-..+..+.+. ..+.+|.||-..+...
T Consensus 204 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~----~-lGa~~---v-i~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~ 273 (373)
T 1p0f_A 204 GFSAIVGCKAAGA-SRIIGVGTHKDKFPKAI----E-LGATE---C-LNPKDYDKPIYEVICEKTNGGVDYAVECAGRIE 273 (373)
T ss_dssp HHHHHHHHHHHTC-SEEEEECSCGGGHHHHH----H-TTCSE---E-ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHH
T ss_pred HHHHHHHHHHcCC-CeEEEECCCHHHHHHHH----H-cCCcE---E-EecccccchHHHHHHHHhCCCCCEEEECCCCHH
Confidence 34443 4566652 38999999999888776 3 36432 1 11111001110 1137999998877655
Q ss_pred hHHHHHhhCCCC-cEEEEEe
Q psy14971 75 VPKEILAQLKPG-GRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pG-GrLv~~~ 93 (156)
.....++.|+++ |+++..-
T Consensus 274 ~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 274 TMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHHHHHHTBCTTTCEEEECC
T ss_pred HHHHHHHHHhcCCCEEEEEc
Confidence 666778999999 9998753
No 314
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.02 E-value=1 Score=35.41 Aligned_cols=71 Identities=10% Similarity=0.071 Sum_probs=47.6
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC-CC-------CCCCCcCEEEEccCCCchHHHH
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK-GH-------AEEGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~-~~-------~~~~~fD~I~i~~~~~~i~~~l 79 (156)
++..| .+|++++.+++.++.+++ +|.+. + + |..+ .+ .....+|.++-+.+ .......
T Consensus 187 a~~~G--~~Vi~~~~~~~~~~~~~~-----~ga~~---~--~--d~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~ 251 (343)
T 2eih_A 187 AKLFG--ARVIATAGSEDKLRRAKA-----LGADE---T--V--NYTHPDWPKEVRRLTGGKGADKVVDHTG-ALYFEGV 251 (343)
T ss_dssp HHHTT--CEEEEEESSHHHHHHHHH-----HTCSE---E--E--ETTSTTHHHHHHHHTTTTCEEEEEESSC-SSSHHHH
T ss_pred HHHCC--CEEEEEeCCHHHHHHHHh-----cCCCE---E--E--cCCcccHHHHHHHHhCCCCceEEEECCC-HHHHHHH
Confidence 44444 699999999998887753 25322 2 2 2111 00 11246999999888 6666778
Q ss_pred HhhCCCCcEEEEEe
Q psy14971 80 LAQLKPGGRLVFHK 93 (156)
Q Consensus 80 ~~~L~pGGrLv~~~ 93 (156)
.+.|+++|+++..-
T Consensus 252 ~~~l~~~G~~v~~g 265 (343)
T 2eih_A 252 IKATANGGRIAIAG 265 (343)
T ss_dssp HHHEEEEEEEEESS
T ss_pred HHhhccCCEEEEEe
Confidence 89999999998753
No 315
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.00 E-value=0.085 Score=42.15 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=49.9
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCchHHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~i~~~l 79 (156)
|.+++ +|+..| ++|++++.+++.++.+++ + +|.+. + +..+-.+... ..+.+|.||-..+.....+..
T Consensus 193 G~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~---~-lGa~~---v--i~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~ 261 (357)
T 2cf5_A 193 GHMGVKIAKAMG--HHVTVISSSNKKREEALQ---D-LGADD---Y--VIGSDQAKMSELADSLDYVIDTVPVHHALEPY 261 (357)
T ss_dssp HHHHHHHHHHHT--CEEEEEESSTTHHHHHHT---T-SCCSC---E--EETTCHHHHHHSTTTEEEEEECCCSCCCSHHH
T ss_pred HHHHHHHHHHCC--CeEEEEeCChHHHHHHHH---H-cCCce---e--eccccHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 33443 456666 689999999987776653 3 46543 2 2111000000 113699999887766555567
Q ss_pred HhhCCCCcEEEEE
Q psy14971 80 LAQLKPGGRLVFH 92 (156)
Q Consensus 80 ~~~L~pGGrLv~~ 92 (156)
++.|++||+++..
T Consensus 262 ~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 262 LSLLKLDGKLILM 274 (357)
T ss_dssp HTTEEEEEEEEEC
T ss_pred HHHhccCCEEEEe
Confidence 8899999999875
No 316
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=89.96 E-value=0.82 Score=36.40 Aligned_cols=82 Identities=15% Similarity=0.123 Sum_probs=51.0
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|++++.+++.++.+++ +|.+. + +-..+..+.+. ..+.+|.||-..+...
T Consensus 203 G~~avqla~~~Ga-~~Vi~~~~~~~~~~~~~~-----lGa~~---v-i~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~ 272 (373)
T 2fzw_A 203 GLAVIMGCKVAGA-SRIIGVDINKDKFARAKE-----FGATE---C-INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVK 272 (373)
T ss_dssp HHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH-----HTCSE---E-ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHH
T ss_pred HHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH-----cCCce---E-eccccccccHHHHHHHHhCCCCCEEEECCCcHH
Confidence 34444 4556652 389999999998888763 35432 1 11111001110 0136999998877655
Q ss_pred hHHHHHhhCCCC-cEEEEEe
Q psy14971 75 VPKEILAQLKPG-GRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pG-GrLv~~~ 93 (156)
.....++.|+++ |+++..-
T Consensus 273 ~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 273 VMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHHHhhccCCcEEEEEe
Confidence 566778999999 9998753
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.93 E-value=0.76 Score=36.80 Aligned_cols=81 Identities=21% Similarity=0.273 Sum_probs=51.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEE--ccCCC---C---CCCCCCcCEEEEccCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSV--KDGSK---G---HAEEGPYDIIHLGAAC 72 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~--gD~~~---~---~~~~~~fD~I~i~~~~ 72 (156)
|.+++ +|+..|. .+|++++.+++..+.+++ +|.+. + +-. .|..+ . .. .+.+|.||-..+.
T Consensus 195 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~-----lGa~~---v-i~~~~~~~~~~i~~~~~~~-~gg~Dvvid~~G~ 263 (370)
T 4ej6_A 195 GLLTVQLARLAGA-TTVILSTRQATKRRLAEE-----VGATA---T-VDPSAGDVVEAIAGPVGLV-PGGVDVVIECAGV 263 (370)
T ss_dssp HHHHHHHHHHTTC-SEEEEECSCHHHHHHHHH-----HTCSE---E-ECTTSSCHHHHHHSTTSSS-TTCEEEEEECSCC
T ss_pred HHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH-----cCCCE---E-ECCCCcCHHHHHHhhhhcc-CCCCCEEEECCCC
Confidence 44444 4566652 499999999998887764 25432 1 110 11000 0 11 2379999987776
Q ss_pred CchHHHHHhhCCCCcEEEEEe
Q psy14971 73 IEVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 73 ~~i~~~l~~~L~pGGrLv~~~ 93 (156)
....+..++.|++||+++..-
T Consensus 264 ~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 264 AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp HHHHHHHHHHEEEEEEEEECS
T ss_pred HHHHHHHHHHhccCCEEEEEe
Confidence 666677889999999998853
No 318
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.69 E-value=1.4 Score=33.02 Aligned_cols=81 Identities=12% Similarity=0.065 Sum_probs=54.7
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCCc-----
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACIE----- 74 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~~----- 74 (156)
+...+.+|+.+++++...+.+++..+. ++-.+ +.++.+|..+... ..++.|.++.+++...
T Consensus 29 l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~---~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~ 104 (266)
T 3oig_A 29 LHEAGARLIFTYAGERLEKSVHELAGT-LDRND---SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELV 104 (266)
T ss_dssp HHHTTCEEEEEESSGGGHHHHHHHHHT-SSSCC---CEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGS
T ss_pred HHHCCCEEEEecCchHHHHHHHHHHHh-cCCCC---ceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccc
Confidence 444567999999998777777766665 35445 8999999875311 0147899999887532
Q ss_pred -----hH-------------------HHHHhhCCCCcEEEEEec
Q psy14971 75 -----VP-------------------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 -----i~-------------------~~l~~~L~pGGrLv~~~~ 94 (156)
.. ..+.+.++++|++|....
T Consensus 105 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 105 GEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred cchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 10 123566778999988653
No 319
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=89.64 E-value=0.11 Score=40.55 Aligned_cols=50 Identities=26% Similarity=0.360 Sum_probs=36.3
Q ss_pred eEEEEccCCCCCC--CCCCcCEEEEccCCCch--------------------------HHHHHhhCCCCcEEEEEecc
Q psy14971 46 KNVSVKDGSKGHA--EEGPYDIIHLGAACIEV--------------------------PKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 46 v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i--------------------------~~~l~~~L~pGGrLv~~~~~ 95 (156)
+++++||+.+... ..++||+|+++-+.... -..+.+.|||||.|++.++.
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 7899999876332 24689999999875310 12346889999999998763
No 320
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.54 E-value=0.66 Score=36.96 Aligned_cols=76 Identities=18% Similarity=0.136 Sum_probs=49.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCH---HHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-----CCCcCEEEEccCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYM---KVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-----EGPYDIIHLGAAC 72 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~---~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-----~~~fD~I~i~~~~ 72 (156)
|.+++ +++..| ++|++++.++ +.++.++ . +|.+. + | .+.+.+ ...+|.||-..+.
T Consensus 193 G~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~~----~-~ga~~---v-----~-~~~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 193 GVLFTLLFRTYG--LEVWMANRREPTEVEQTVIE----E-TKTNY---Y-----N-SSNGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp HHHHHHHHHHHT--CEEEEEESSCCCHHHHHHHH----H-HTCEE---E-----E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred HHHHHHHHHhCC--CEEEEEeCCccchHHHHHHH----H-hCCce---e-----c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence 33443 455555 5999999998 7666654 3 35432 2 2 111111 1469999998887
Q ss_pred CchH-HHHHhhCCCCcEEEEEe
Q psy14971 73 IEVP-KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 73 ~~i~-~~l~~~L~pGGrLv~~~ 93 (156)
.... +...+.|+++|+++..-
T Consensus 257 ~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 257 DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp CTHHHHHHGGGEEEEEEEEECS
T ss_pred hHHHHHHHHHHHhcCCEEEEEe
Confidence 6666 77889999999998753
No 321
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=89.44 E-value=0.34 Score=39.38 Aligned_cols=80 Identities=10% Similarity=-0.039 Sum_probs=52.3
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCC-CccceEEEEcc---CCCCCCCCCCcCEEEEccCCCch---HHH-------
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQN-RKSFKNVSVKD---GSKGHAEEGPYDIIHLGAACIEV---PKE------- 78 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~-n~~~v~~~~gD---~~~~~~~~~~fD~I~i~~~~~~i---~~~------- 78 (156)
|.-.|+.-|.-...-+..-+++.. +... + ..++.|. ....+....++|.|+++.+++.+ |+.
T Consensus 90 pe~~v~~nDLp~NDFntlF~~L~~-~~~~~~---~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~ 165 (359)
T 1m6e_X 90 PEYQIFLNDLPGNDFNAIFRSLPI-ENDVDG---VCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGN 165 (359)
T ss_dssp CEEEEEEEECTTSCHHHHHTTTTT-SCSCTT---CEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTT
T ss_pred CceEEEecCCCchHHHHHHHhcch-hcccCC---CEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCc
Confidence 456788888877777777666654 2211 2 3444443 34344456789999999987642 311
Q ss_pred -----------------------------HHhhCCCCcEEEEEeccC
Q psy14971 79 -----------------------------ILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 79 -----------------------------l~~~L~pGGrLv~~~~~~ 96 (156)
-.+-|+|||+||+.+...
T Consensus 166 i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 166 IYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp TSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred eEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 167899999999987643
No 322
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.84 E-value=0.68 Score=36.31 Aligned_cols=74 Identities=14% Similarity=0.040 Sum_probs=47.3
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC------CCCCCCcCEEEEccCCCchHHHHH
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG------HAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~------~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
+++..| ++|++++.+++.++.+++ +|.+. ++..+..+. ......+|.+|-+.+. ...+..+
T Consensus 168 ~a~~~G--a~Vi~~~~~~~~~~~~~~-----~ga~~-----~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~ 234 (334)
T 3qwb_A 168 LLKMKG--AHTIAVASTDEKLKIAKE-----YGAEY-----LINASKEDILRQVLKFTNGKGVDASFDSVGK-DTFEISL 234 (334)
T ss_dssp HHHHTT--CEEEEEESSHHHHHHHHH-----TTCSE-----EEETTTSCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHH
T ss_pred HHHHCC--CEEEEEeCCHHHHHHHHH-----cCCcE-----EEeCCCchHHHHHHHHhCCCCceEEEECCCh-HHHHHHH
Confidence 345555 699999999998877653 35322 222111110 0112469999988775 5556778
Q ss_pred hhCCCCcEEEEEe
Q psy14971 81 AQLKPGGRLVFHK 93 (156)
Q Consensus 81 ~~L~pGGrLv~~~ 93 (156)
+.|++||+++..-
T Consensus 235 ~~l~~~G~iv~~G 247 (334)
T 3qwb_A 235 AALKRKGVFVSFG 247 (334)
T ss_dssp HHEEEEEEEEECC
T ss_pred HHhccCCEEEEEc
Confidence 8999999999853
No 323
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.76 E-value=0.27 Score=39.36 Aligned_cols=82 Identities=17% Similarity=0.115 Sum_probs=51.1
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|+++|.+++.++.++ + +|.+. + +-..+..+.+. ..+.+|.||-..+...
T Consensus 205 G~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~----~-lGa~~---v-i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 274 (374)
T 1cdo_A 205 GLAAVMGCHSAGA-KRIIAVDLNPDKFEKAK----V-FGATD---F-VNPNDHSEPISQVLSKMTNGGVDFSLECVGNVG 274 (374)
T ss_dssp HHHHHHHHHHTTC-SEEEEECSCGGGHHHHH----H-TTCCE---E-ECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHH
T ss_pred HHHHHHHHHHcCC-CEEEEEcCCHHHHHHHH----H-hCCce---E-EeccccchhHHHHHHHHhCCCCCEEEECCCCHH
Confidence 34444 4555552 38999999999888776 3 35432 2 11111001111 0136999998877655
Q ss_pred hHHHHHhhCCCC-cEEEEEe
Q psy14971 75 VPKEILAQLKPG-GRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pG-GrLv~~~ 93 (156)
.....++.|++| |+++..-
T Consensus 275 ~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 275 VMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHHHHHHTBCTTTCEEEECS
T ss_pred HHHHHHHHhhcCCcEEEEEc
Confidence 666778999999 9998753
No 324
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.49 E-value=0.19 Score=40.29 Aligned_cols=76 Identities=14% Similarity=0.151 Sum_probs=47.3
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCchHHHHHhhCCC
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIEVPKEILAQLKP 85 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~i~~~l~~~L~p 85 (156)
+|+..| .+|++++.+++..+.+++ . +|.+. ++..+-.+... ..+.+|.||-..+........++.|++
T Consensus 206 ~a~~~G--a~Vi~~~~~~~~~~~~~~---~-lGa~~-----v~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~ 274 (366)
T 1yqd_A 206 FAKAFG--SKVTVISTSPSKKEEALK---N-FGADS-----FLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKS 274 (366)
T ss_dssp HHHHTT--CEEEEEESCGGGHHHHHH---T-SCCSE-----EEETTCHHHHHHTTTCEEEEEECCSSCCCSHHHHHHEEE
T ss_pred HHHHCC--CEEEEEeCCHHHHHHHHH---h-cCCce-----EEeccCHHHHHHhhCCCCEEEECCCcHHHHHHHHHHHhc
Confidence 455555 699999999987776653 3 35432 12111000000 013699999887766544567789999
Q ss_pred CcEEEEEe
Q psy14971 86 GGRLVFHK 93 (156)
Q Consensus 86 GGrLv~~~ 93 (156)
+|+++..-
T Consensus 275 ~G~iv~~g 282 (366)
T 1yqd_A 275 HGKLILVG 282 (366)
T ss_dssp EEEEEECC
T ss_pred CCEEEEEc
Confidence 99988753
No 325
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=88.43 E-value=1.5 Score=34.31 Aligned_cols=83 Identities=12% Similarity=0.008 Sum_probs=52.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--C---CCCCCCCcCEEEEccCCCch
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--K---GHAEEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~---~~~~~~~fD~I~i~~~~~~i 75 (156)
|.+++ +|++.|. ..|+++|.+++.++.|+ + +|.+. .+-..+.. + ...+...+|.|+-..+....
T Consensus 173 G~~aiq~ak~~G~-~~vi~~~~~~~k~~~a~----~-lGa~~----~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G~~~~ 242 (346)
T 4a2c_A 173 GLLAIQCAVALGA-KSVTAIDISSEKLALAK----S-FGAMQ----TFNSSEMSAPQMQSVLRELRFNQLILETAGVPQT 242 (346)
T ss_dssp HHHHHHHHHHTTC-SEEEEEESCHHHHHHHH----H-TTCSE----EEETTTSCHHHHHHHHGGGCSSEEEEECSCSHHH
T ss_pred chHHHHHHHHcCC-cEEEEEechHHHHHHHH----H-cCCeE----EEeCCCCCHHHHHHhhcccCCcccccccccccch
Confidence 33444 4566663 57899999999888776 3 46432 12111110 0 01123458988887777666
Q ss_pred HHHHHhhCCCCcEEEEEec
Q psy14971 76 PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~~~ 94 (156)
.+..++.|++||++++.-.
T Consensus 243 ~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 243 VELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp HHHHHHHCCTTCEEEECCC
T ss_pred hhhhhheecCCeEEEEEec
Confidence 6778899999999998543
No 326
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=88.07 E-value=0.64 Score=36.76 Aligned_cols=73 Identities=8% Similarity=-0.026 Sum_probs=47.3
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-------CCCcCEEEEccCCCchHHHH
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-------EGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-------~~~fD~I~i~~~~~~i~~~l 79 (156)
+|+..| ++|++++.+++.++.++ + +|.+. ++.-+. +.+.+ ...+|.+|-..+.... ...
T Consensus 184 la~~~G--a~Vi~~~~~~~~~~~~~----~-~Ga~~-----~~~~~~-~~~~~~v~~~~~~~g~D~vid~~g~~~~-~~~ 249 (349)
T 3pi7_A 184 LAKEEG--FRPIVTVRRDEQIALLK----D-IGAAH-----VLNEKA-PDFEATLREVMKAEQPRIFLDAVTGPLA-SAI 249 (349)
T ss_dssp HHHHHT--CEEEEEESCGGGHHHHH----H-HTCSE-----EEETTS-TTHHHHHHHHHHHHCCCEEEESSCHHHH-HHH
T ss_pred HHHHCC--CEEEEEeCCHHHHHHHH----H-cCCCE-----EEECCc-HHHHHHHHHHhcCCCCcEEEECCCChhH-HHH
Confidence 455665 69999999999888776 3 35432 222111 11111 1369999887765444 567
Q ss_pred HhhCCCCcEEEEEe
Q psy14971 80 LAQLKPGGRLVFHK 93 (156)
Q Consensus 80 ~~~L~pGGrLv~~~ 93 (156)
++.|++||+++..-
T Consensus 250 ~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 250 FNAMPKRARWIIYG 263 (349)
T ss_dssp HHHSCTTCEEEECC
T ss_pred HhhhcCCCEEEEEe
Confidence 88999999999853
No 327
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.06 E-value=3.4 Score=31.24 Aligned_cols=60 Identities=12% Similarity=0.073 Sum_probs=45.1
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC-CC----------CCCCcCEEEEccCCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG-HA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~-~~----------~~~~fD~I~i~~~~~ 73 (156)
++..+.+|+.++++++..+.+.+.++. .+-.+ +.++.+|..+. .. ..++.|.++.+++..
T Consensus 32 L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~---~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 32 LSSNGIMVVLTCRDVTKGHEAVEKLKN-SNHEN---VVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHT-TTCCS---EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCCc---eEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCccc
Confidence 444567999999999998888888876 35456 99999998764 10 024799999999863
No 328
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=88.02 E-value=1.4 Score=35.45 Aligned_cols=79 Identities=10% Similarity=0.023 Sum_probs=48.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC-------CCCCCcCEEEEccCCC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH-------AEEGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~-------~~~~~fD~I~i~~~~~ 73 (156)
|.+++ +|+..|. .+|+++|.+++.++.|++ +|. ..+.-+..+.+ .....+|.||-..+..
T Consensus 198 G~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a~~-----lGa------~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~ 265 (398)
T 1kol_A 198 GLAAAASARLLGA-AVVIVGDLNPARLAHAKA-----QGF------EIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFE 265 (398)
T ss_dssp HHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH-----TTC------EEEETTSSSCHHHHHHHHHSSSCEEEEEECCCTT
T ss_pred HHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHH-----cCC------cEEccCCcchHHHHHHHHhCCCCCCEEEECCCCc
Confidence 44444 4566652 489999999998888753 353 12221111100 1123699999877654
Q ss_pred c---------------hHHHHHhhCCCCcEEEEE
Q psy14971 74 E---------------VPKEILAQLKPGGRLVFH 92 (156)
Q Consensus 74 ~---------------i~~~l~~~L~pGGrLv~~ 92 (156)
. .....++.|++||++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 266 ARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred ccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 2 345678899999999874
No 329
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=87.86 E-value=1.6 Score=31.19 Aligned_cols=71 Identities=15% Similarity=0.071 Sum_probs=44.8
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC-C-------CCCCCcCEEEEccCCCchHHHH
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG-H-------AEEGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~-~-------~~~~~fD~I~i~~~~~~i~~~l 79 (156)
+...| .+|++++.+++..+.++ . +|.+ ..+ |..+. . .....+|.++.+++ ....+..
T Consensus 59 ~~~~G--~~V~~~~~~~~~~~~~~----~-~g~~----~~~---d~~~~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~ 123 (198)
T 1pqw_A 59 AKMIG--ARIYTTAGSDAKREMLS----R-LGVE----YVG---DSRSVDFADEILELTDGYGVDVVLNSLA-GEAIQRG 123 (198)
T ss_dssp HHHHT--CEEEEEESSHHHHHHHH----T-TCCS----EEE---ETTCSTHHHHHHHHTTTCCEEEEEECCC-THHHHHH
T ss_pred HHHcC--CEEEEEeCCHHHHHHHH----H-cCCC----EEe---eCCcHHHHHHHHHHhCCCCCeEEEECCc-hHHHHHH
Confidence 34444 69999999998776654 3 3532 212 22111 0 11236999998775 3445667
Q ss_pred HhhCCCCcEEEEEe
Q psy14971 80 LAQLKPGGRLVFHK 93 (156)
Q Consensus 80 ~~~L~pGGrLv~~~ 93 (156)
.+.|++||+++..-
T Consensus 124 ~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 124 VQILAPGGRFIELG 137 (198)
T ss_dssp HHTEEEEEEEEECS
T ss_pred HHHhccCCEEEEEc
Confidence 88999999999854
No 330
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.79 E-value=0.18 Score=40.08 Aligned_cols=51 Identities=18% Similarity=0.198 Sum_probs=37.2
Q ss_pred eEEEEccCCCCCC--CCCCcCEEEEccCCCc-----------------h---HHHHHhhCCCCcEEEEEeccC
Q psy14971 46 KNVSVKDGSKGHA--EEGPYDIIHLGAACIE-----------------V---PKEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 46 v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~-----------------i---~~~l~~~L~pGGrLv~~~~~~ 96 (156)
.++++||+.+.+. ..++||+|+++.+... + ...+.+.|+|||.+++.++..
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 8899999865332 2468999999977531 1 124578999999999987643
No 331
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.21 E-value=0.088 Score=41.40 Aligned_cols=76 Identities=11% Similarity=0.059 Sum_probs=48.2
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CC---CCCCCCcCEEEEccCCCchHHHHHh
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KG---HAEEGPYDIIHLGAACIEVPKEILA 81 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~---~~~~~~fD~I~i~~~~~~i~~~l~~ 81 (156)
+|+..| ++|++++.+++.++.+++ +|.+. .+-..+.. +. ......+|.+|-+.+. ......++
T Consensus 160 ~a~~~G--a~Vi~~~~~~~~~~~~~~-----~Ga~~----~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~ 227 (325)
T 3jyn_A 160 WAKALG--AKLIGTVSSPEKAAHAKA-----LGAWE----TIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLD 227 (325)
T ss_dssp HHHHHT--CEEEEEESSHHHHHHHHH-----HTCSE----EEETTTSCHHHHHHHHTTTCCEEEEEESSCG-GGHHHHHT
T ss_pred HHHHCC--CEEEEEeCCHHHHHHHHH-----cCCCE----EEeCCCccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHH
Confidence 355555 699999999998887763 25322 12111110 00 0112469999887776 45567789
Q ss_pred hCCCCcEEEEEec
Q psy14971 82 QLKPGGRLVFHKG 94 (156)
Q Consensus 82 ~L~pGGrLv~~~~ 94 (156)
.|++||+++..-.
T Consensus 228 ~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 228 SVAPRGLVVSFGN 240 (325)
T ss_dssp TEEEEEEEEECCC
T ss_pred HhcCCCEEEEEec
Confidence 9999999998643
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=87.03 E-value=1.9 Score=34.36 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=50.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|+++|.+++.++.++ + +|.+. + +-..+..+.+. ..+.+|.||-..+...
T Consensus 208 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~----~-lGa~~---v-i~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~ 277 (376)
T 1e3i_A 208 GLSAIIGCKIAGA-SRIIAIDINGEKFPKAK----A-LGATD---C-LNPRELDKPVQDVITELTAGGVDYSLDCAGTAQ 277 (376)
T ss_dssp HHHHHHHHHHTTC-SEEEEECSCGGGHHHHH----H-TTCSE---E-ECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHH
T ss_pred HHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----H-hCCcE---E-EccccccchHHHHHHHHhCCCccEEEECCCCHH
Confidence 34444 4555552 38999999999888775 3 35432 1 11111001110 0136999998877655
Q ss_pred hHHHHHhhCCCC-cEEEEEe
Q psy14971 75 VPKEILAQLKPG-GRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pG-GrLv~~~ 93 (156)
..+..++.|++| |+++..-
T Consensus 278 ~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 278 TLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHHHHHTBCTTTCEEEECC
T ss_pred HHHHHHHHhhcCCCEEEEEC
Confidence 566778999999 9998743
No 333
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.85 E-value=0.99 Score=35.19 Aligned_cols=74 Identities=8% Similarity=0.070 Sum_probs=45.3
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccC-CCCCC--CCCCcCEEEEccCCCchHHHHHhhC
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDG-SKGHA--EEGPYDIIHLGAACIEVPKEILAQL 83 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~-~~~~~--~~~~fD~I~i~~~~~~i~~~l~~~L 83 (156)
+|+..| ++|++++.+++.++.+++ +|.+. + +-..+. .+... ....+|.+|-..+.. ..+..++.|
T Consensus 169 ~a~~~G--a~vi~~~~~~~~~~~~~~-----lGa~~---~-i~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l 236 (328)
T 1xa0_A 169 MLAKRG--YTVEASTGKAAEHDYLRV-----LGAKE---V-LAREDVMAERIRPLDKQRWAAAVDPVGGR-TLATVLSRM 236 (328)
T ss_dssp HHHHTT--CCEEEEESCTTCHHHHHH-----TTCSE---E-EECC---------CCSCCEEEEEECSTTT-THHHHHHTE
T ss_pred HHHHCC--CEEEEEECCHHHHHHHHH-----cCCcE---E-EecCCcHHHHHHHhcCCcccEEEECCcHH-HHHHHHHhh
Confidence 455555 589999999888877753 35432 1 111111 01001 124699998877664 445678899
Q ss_pred CCCcEEEEE
Q psy14971 84 KPGGRLVFH 92 (156)
Q Consensus 84 ~pGGrLv~~ 92 (156)
++||+++..
T Consensus 237 ~~~G~~v~~ 245 (328)
T 1xa0_A 237 RYGGAVAVS 245 (328)
T ss_dssp EEEEEEEEC
T ss_pred ccCCEEEEE
Confidence 999999874
No 334
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=86.84 E-value=1.4 Score=34.90 Aligned_cols=71 Identities=13% Similarity=0.052 Sum_probs=45.9
Q ss_pred HhcCCCCEEEEEeCCHH---HHHHHHHHHhhhcCCCCccceEEEEccCCC-CCCC----CCCcCEEEEccCCCchHHHHH
Q psy14971 9 GIKGERALVLILNHYMK---VKSKNQNNKKLNIKQNRKSFKNVSVKDGSK-GHAE----EGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~---~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~-~~~~----~~~fD~I~i~~~~~~i~~~l~ 80 (156)
+..|. .+|++++.+++ .++.++ + +|.+. + |..+ .+.+ .+.+|.||-..+........+
T Consensus 195 k~~Ga-~~Vi~~~~~~~~~~~~~~~~----~-lGa~~---v-----~~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~ 260 (357)
T 2b5w_A 195 DDKGY-ENLYCLGRRDRPDPTIDIIE----E-LDATY---V-----DSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSV 260 (357)
T ss_dssp CTTCC-CEEEEEECCCSSCHHHHHHH----H-TTCEE---E-----ETTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHH
T ss_pred HHcCC-cEEEEEeCCcccHHHHHHHH----H-cCCcc---c-----CCCccCHHHHHHhCCCCCEEEECCCChHHHHHHH
Confidence 44442 24999999988 777765 3 36432 2 2211 1110 136999998777655556778
Q ss_pred hhCCCCcEEEEEe
Q psy14971 81 AQLKPGGRLVFHK 93 (156)
Q Consensus 81 ~~L~pGGrLv~~~ 93 (156)
+.|++||+++..-
T Consensus 261 ~~l~~~G~iv~~g 273 (357)
T 2b5w_A 261 QALAPNGVGALLG 273 (357)
T ss_dssp HHEEEEEEEEECC
T ss_pred HHHhcCCEEEEEe
Confidence 9999999998853
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=86.81 E-value=1.9 Score=34.26 Aligned_cols=82 Identities=15% Similarity=0.048 Sum_probs=50.7
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|++++.+++.++.++ + +|.+. + +-..+..+.+. ..+.+|.||-..+...
T Consensus 204 G~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~----~-lGa~~---v-i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 273 (374)
T 2jhf_A 204 GLSVIMGCKAAGA-ARIIGVDINKDKFAKAK----E-VGATE---C-VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLD 273 (374)
T ss_dssp HHHHHHHHHHTTC-SEEEEECSCGGGHHHHH----H-TTCSE---E-ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHH
T ss_pred HHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----H-hCCce---E-ecccccchhHHHHHHHHhCCCCcEEEECCCCHH
Confidence 34443 4555552 38999999999888775 3 35432 1 11111001110 1136999998877655
Q ss_pred hHHHHHhhCCCC-cEEEEEe
Q psy14971 75 VPKEILAQLKPG-GRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pG-GrLv~~~ 93 (156)
.....++.|+++ |+++..-
T Consensus 274 ~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 274 TMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHHHHHHHBCTTTCEEEECS
T ss_pred HHHHHHHHhhcCCcEEEEec
Confidence 666778999999 9998753
No 336
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=86.67 E-value=0.031 Score=44.32 Aligned_cols=75 Identities=8% Similarity=0.022 Sum_probs=46.6
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CC---CCCCCCcCEEEEccCCCchHHHHHh
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KG---HAEEGPYDIIHLGAACIEVPKEILA 81 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~---~~~~~~fD~I~i~~~~~~i~~~l~~ 81 (156)
+|+..| ++|++++.+++.++.+++ +|.+. .+-..+.. +. ......+|.+|-+.+...... ..+
T Consensus 164 ~a~~~G--a~Vi~~~~~~~~~~~~~~-----lga~~----~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~-~~~ 231 (340)
T 3gms_A 164 LSQILN--FRLIAVTRNNKHTEELLR-----LGAAY----VIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNE-LAF 231 (340)
T ss_dssp HHHHHT--CEEEEEESSSTTHHHHHH-----HTCSE----EEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHH-HHH
T ss_pred HHHHcC--CEEEEEeCCHHHHHHHHh-----CCCcE----EEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHH-HHH
Confidence 455555 699999999998887764 24322 12111100 00 011236999998777655544 448
Q ss_pred hCCCCcEEEEEe
Q psy14971 82 QLKPGGRLVFHK 93 (156)
Q Consensus 82 ~L~pGGrLv~~~ 93 (156)
.|++||+++..-
T Consensus 232 ~l~~~G~iv~~G 243 (340)
T 3gms_A 232 SLRPNGHFLTIG 243 (340)
T ss_dssp TEEEEEEEEECC
T ss_pred HhcCCCEEEEEe
Confidence 999999999854
No 337
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=86.58 E-value=0.59 Score=36.50 Aligned_cols=77 Identities=16% Similarity=0.059 Sum_probs=45.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC-CCCCCCCcCEEEEccCCCchHHHH
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK-GHAEEGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~-~~~~~~~fD~I~i~~~~~~i~~~l 79 (156)
|.+++ +|+..| .+|++++.+ +..+.++ + +|.+. ++.-+..+ .......+|.||-..+.... ...
T Consensus 166 G~~a~q~a~~~G--a~vi~~~~~-~~~~~~~----~-lGa~~-----~i~~~~~~~~~~~~~g~D~v~d~~g~~~~-~~~ 231 (321)
T 3tqh_A 166 GHLAIQLAKQKG--TTVITTASK-RNHAFLK----A-LGAEQ-----CINYHEEDFLLAISTPVDAVIDLVGGDVG-IQS 231 (321)
T ss_dssp HHHHHHHHHHTT--CEEEEEECH-HHHHHHH----H-HTCSE-----EEETTTSCHHHHCCSCEEEEEESSCHHHH-HHH
T ss_pred HHHHHHHHHHcC--CEEEEEecc-chHHHHH----H-cCCCE-----EEeCCCcchhhhhccCCCEEEECCCcHHH-HHH
Confidence 34443 456665 589999854 4344443 4 46532 22211111 00112469999887765555 677
Q ss_pred HhhCCCCcEEEEE
Q psy14971 80 LAQLKPGGRLVFH 92 (156)
Q Consensus 80 ~~~L~pGGrLv~~ 92 (156)
++.|++||+++..
T Consensus 232 ~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 232 IDCLKETGCIVSV 244 (321)
T ss_dssp GGGEEEEEEEEEC
T ss_pred HHhccCCCEEEEe
Confidence 8999999999985
No 338
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.18 E-value=0.75 Score=36.30 Aligned_cols=76 Identities=11% Similarity=0.012 Sum_probs=47.5
Q ss_pred HHHhc-CCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC-----CCCCCCCcCEEEEccCCCchHHHHH
Q psy14971 7 IVGIK-GERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK-----GHAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 7 la~l~-g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~-----~~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
++... | .+|+++|.+++.++.+++ +|.+. .+-..+... .....+.+|.+|-+.+.....+..+
T Consensus 190 ~a~~~~G--a~Vi~~~~~~~~~~~~~~-----~g~~~----~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~ 258 (347)
T 1jvb_A 190 IAKAVSG--ATIIGVDVREEAVEAAKR-----AGADY----VINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYP 258 (347)
T ss_dssp HHHHHTC--CEEEEEESSHHHHHHHHH-----HTCSE----EEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGG
T ss_pred HHHHcCC--CeEEEEcCCHHHHHHHHH-----hCCCE----EecCCCccHHHHHHHHhcCCCceEEEECCCCHHHHHHHH
Confidence 34445 5 689999999998887753 24322 221112100 0011147999998887654555678
Q ss_pred hhCCCCcEEEEEe
Q psy14971 81 AQLKPGGRLVFHK 93 (156)
Q Consensus 81 ~~L~pGGrLv~~~ 93 (156)
+.|+++|+++..-
T Consensus 259 ~~l~~~G~iv~~g 271 (347)
T 1jvb_A 259 KALAKQGKYVMVG 271 (347)
T ss_dssp GGEEEEEEEEECC
T ss_pred HHHhcCCEEEEEC
Confidence 8999999998843
No 339
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=85.92 E-value=0.32 Score=39.94 Aligned_cols=55 Identities=4% Similarity=-0.099 Sum_probs=32.5
Q ss_pred CCCEEEEEeCC-----------HHHHHHHHHHHhhhcCC-CCccceEEEEccC---CCCCCCCCCcCEEEEccCCCc
Q psy14971 13 ERALVLILNHY-----------MKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDG---SKGHAEEGPYDIIHLGAACIE 74 (156)
Q Consensus 13 ~~g~V~avD~~-----------~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~---~~~~~~~~~fD~I~i~~~~~~ 74 (156)
|.-.|+.-|.- +.+.+.+++.. |- .+ ..++.|.. ...+....++|.|+++.+++.
T Consensus 92 pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~----g~~~~---~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 161 (384)
T 2efj_A 92 PTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN----GRKIG---SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHW 161 (384)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT----CCCTT---SEEEEECCSCTTSCCSCTTCEEEEEEESCTTB
T ss_pred CceEEEecCCCccchHHHHhhhhhhHhhhhhhc----cCCCC---ceEEEecchhhhhccCCCCceEEEEecceeee
Confidence 34567788876 55555443321 21 12 45666654 233344678999999998764
No 340
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=85.90 E-value=0.37 Score=38.30 Aligned_cols=32 Identities=13% Similarity=0.065 Sum_probs=24.6
Q ss_pred CCcCEEEEccCCCchHHHHHhhCCCCcEEEEEe
Q psy14971 61 GPYDIIHLGAACIEVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 61 ~~fD~I~i~~~~~~i~~~l~~~L~pGGrLv~~~ 93 (156)
..+|.||-..+..... ..++.|+++|+++..-
T Consensus 244 ~g~Dvvid~~G~~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 244 GEAKLALNCVGGKSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp CCEEEEEESSCHHHHH-HHHHTSCTTCEEEECC
T ss_pred CCceEEEECCCchhHH-HHHHHhccCCEEEEec
Confidence 4699999877655544 5679999999998853
No 341
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=85.84 E-value=1.2 Score=34.95 Aligned_cols=73 Identities=11% Similarity=0.089 Sum_probs=45.7
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC------CCCCcCEEEEccCCCchHHHHHh
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA------EEGPYDIIHLGAACIEVPKEILA 81 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~------~~~~fD~I~i~~~~~~i~~~l~~ 81 (156)
++..| ++|++++.+++.++.+++. +|.+. .+-..+. +.+. ....+|.++-+.+. ......++
T Consensus 176 a~~~G--~~V~~~~~~~~~~~~~~~~----~g~~~----~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~ 243 (345)
T 2j3h_A 176 AKMMG--CYVVGSAGSKEKVDLLKTK----FGFDD----AFNYKEE-SDLTAALKRCFPNGIDIYFENVGG-KMLDAVLV 243 (345)
T ss_dssp HHHTT--CEEEEEESSHHHHHHHHHT----SCCSE----EEETTSC-SCSHHHHHHHCTTCEEEEEESSCH-HHHHHHHT
T ss_pred HHHCC--CEEEEEeCCHHHHHHHHHH----cCCce----EEecCCH-HHHHHHHHHHhCCCCcEEEECCCH-HHHHHHHH
Confidence 44444 6999999999888777533 35322 1111111 0111 01469999988765 44556788
Q ss_pred hCCCCcEEEEE
Q psy14971 82 QLKPGGRLVFH 92 (156)
Q Consensus 82 ~L~pGGrLv~~ 92 (156)
.|++||+++..
T Consensus 244 ~l~~~G~~v~~ 254 (345)
T 2j3h_A 244 NMNMHGRIAVC 254 (345)
T ss_dssp TEEEEEEEEEC
T ss_pred HHhcCCEEEEE
Confidence 99999999875
No 342
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=85.83 E-value=0.39 Score=37.76 Aligned_cols=75 Identities=9% Similarity=-0.133 Sum_probs=42.9
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC----chH--------HHHHh
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI----EVP--------KEILA 81 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~----~i~--------~~l~~ 81 (156)
...|+++|+..++...++.. .. +|. + +....++.........+||.|+++.+.. .+. +...+
T Consensus 98 ~~~v~g~dVGvDl~~~pi~~-~~-~g~-~---ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~ 171 (277)
T 3evf_A 98 VSGVKGFTLGRDGHEKPMNV-QS-LGW-N---IITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEK 171 (277)
T ss_dssp EEEEEEECCCCTTCCCCCCC-CB-TTG-G---GEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCcceeEEEeccCccccccc-Cc-CCC-C---eEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHH
Confidence 35788888875542111110 11 122 4 4445555432222346899999998765 111 22357
Q ss_pred hCCCC-cEEEEEec
Q psy14971 82 QLKPG-GRLVFHKG 94 (156)
Q Consensus 82 ~L~pG-GrLv~~~~ 94 (156)
.|+|| |.+|+-+=
T Consensus 172 ~LkpG~G~FV~KVf 185 (277)
T 3evf_A 172 WLACGVDNFCVKVL 185 (277)
T ss_dssp HHTTCCSEEEEEES
T ss_pred HhCCCCCeEEEEec
Confidence 89999 99999553
No 343
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=85.65 E-value=0.15 Score=40.28 Aligned_cols=77 Identities=14% Similarity=0.020 Sum_probs=48.0
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccC--CCC---CCCCCCcCEEEEccCCCchHHHHHh
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDG--SKG---HAEEGPYDIIHLGAACIEVPKEILA 81 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~--~~~---~~~~~~fD~I~i~~~~~~i~~~l~~ 81 (156)
+++..+ ..+|+++|.+++.++.+++ +|.+. .+-..+. .+. ......+|.++.+...........+
T Consensus 182 ~a~~~~-g~~Vi~~~~~~~r~~~~~~-----~Ga~~----~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~ 251 (348)
T 4eez_A 182 YAKNVF-GAKVIAVDINQDKLNLAKK-----IGADV----TINSGDVNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVA 251 (348)
T ss_dssp HHHHTS-CCEEEEEESCHHHHHHHHH-----TTCSE----EEEC-CCCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHH
T ss_pred HHHHhC-CCEEEEEECcHHHhhhhhh-----cCCeE----EEeCCCCCHHHHhhhhcCCCCceEEEEeccCcchhheehe
Confidence 344444 3799999999998776663 34322 2211121 000 1122357888887776666677789
Q ss_pred hCCCCcEEEEEe
Q psy14971 82 QLKPGGRLVFHK 93 (156)
Q Consensus 82 ~L~pGGrLv~~~ 93 (156)
.|+++|++++.-
T Consensus 252 ~l~~~G~~v~~g 263 (348)
T 4eez_A 252 SLKPMGKMVAVA 263 (348)
T ss_dssp TEEEEEEEEECC
T ss_pred eecCCceEEEEe
Confidence 999999998854
No 344
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=85.48 E-value=0.26 Score=38.17 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=45.1
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHHhhCCCC
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEILAQLKPG 86 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~~~L~pG 86 (156)
+|+..| .+|++++.+++.++.+++ +|.+. + +-..+..+.......+|.++- .+. .......+.|+++
T Consensus 145 ~a~~~G--a~Vi~~~~~~~~~~~~~~-----~ga~~---~-~~~~~~~~~~~~~~~~d~vid-~g~-~~~~~~~~~l~~~ 211 (302)
T 1iz0_A 145 VARAMG--LRVLAAASRPEKLALPLA-----LGAEE---A-ATYAEVPERAKAWGGLDLVLE-VRG-KEVEESLGLLAHG 211 (302)
T ss_dssp HHHHTT--CEEEEEESSGGGSHHHHH-----TTCSE---E-EEGGGHHHHHHHTTSEEEEEE-CSC-TTHHHHHTTEEEE
T ss_pred HHHHCC--CEEEEEeCCHHHHHHHHh-----cCCCE---E-EECCcchhHHHHhcCceEEEE-CCH-HHHHHHHHhhccC
Confidence 345555 699999999988877643 35432 2 111110000000146999998 665 4556778899999
Q ss_pred cEEEEE
Q psy14971 87 GRLVFH 92 (156)
Q Consensus 87 GrLv~~ 92 (156)
|+++..
T Consensus 212 G~~v~~ 217 (302)
T 1iz0_A 212 GRLVYI 217 (302)
T ss_dssp EEEEEC
T ss_pred CEEEEE
Confidence 999874
No 345
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.24 E-value=3.6 Score=31.00 Aligned_cols=59 Identities=10% Similarity=0.046 Sum_probs=44.4
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----------CCCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----------AEEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----------~~~~~fD~I~i~~~~ 72 (156)
+...+++|+..+++++.++.+.+.++. ++-.+ +.++..|..+.. ...+..|.++.+++.
T Consensus 28 la~~Ga~Vvi~~r~~~~~~~~~~~~~~-~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 28 LDQLGAKLVFTYRKERSRKELEKLLEQ-LNQPE---AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHTTCEEEEEESSGGGHHHHHHHHGG-GTCSS---CEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHCCCEEEEEECCHHHHHHHHHHHHh-cCCCc---EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEecccc
Confidence 444568999999999999888888877 46556 888999986521 112678999998764
No 346
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=85.10 E-value=1.4 Score=35.65 Aligned_cols=47 Identities=6% Similarity=-0.116 Sum_probs=34.7
Q ss_pred CchHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC
Q psy14971 1 MGDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK 55 (156)
Q Consensus 1 ~G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~ 55 (156)
.|.||- |++... ..+|+++|+|+.++...++.+ . . +| ++++.+|+.+
T Consensus 69 ~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~-~--~~---l~ii~~D~l~ 116 (353)
T 1i4w_A 69 VGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E-G--SP---LQILKRDPYD 116 (353)
T ss_dssp TCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T-T--SS---CEEECSCTTC
T ss_pred CCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c-C--CC---EEEEECCccc
Confidence 366664 333322 268999999999999988876 3 1 47 9999999964
No 347
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=84.84 E-value=1.3 Score=34.86 Aligned_cols=76 Identities=11% Similarity=0.079 Sum_probs=47.8
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC---CC---CCCCCcCEEEEccCCCchHHHHH
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK---GH---AEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~---~~---~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
+|+..|. .+|++++.+++.++.+++ +|.+. ++..+..+ .. .....+|.||-..+.........
T Consensus 186 ~a~~~Ga-~~Vi~~~~~~~~~~~~~~-----~Ga~~-----~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~ 254 (348)
T 2d8a_A 186 VAKASGA-YPVIVSEPSDFRRELAKK-----VGADY-----VINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGL 254 (348)
T ss_dssp HHHHTTC-CSEEEECSCHHHHHHHHH-----HTCSE-----EECTTTSCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHH
T ss_pred HHHHcCC-CEEEEECCCHHHHHHHHH-----hCCCE-----EECCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHH
Confidence 3555542 389999999998887763 35422 11111110 00 11236999998887655566778
Q ss_pred hhCCCCcEEEEEe
Q psy14971 81 AQLKPGGRLVFHK 93 (156)
Q Consensus 81 ~~L~pGGrLv~~~ 93 (156)
+.|+++|+++..-
T Consensus 255 ~~l~~~G~iv~~g 267 (348)
T 2d8a_A 255 QAVTPAGRVSLLG 267 (348)
T ss_dssp HHEEEEEEEEECC
T ss_pred HHHhcCCEEEEEc
Confidence 8999999998753
No 348
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=84.79 E-value=0.32 Score=38.52 Aligned_cols=72 Identities=15% Similarity=0.119 Sum_probs=45.6
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC-------CCCCCcCEEEEccCCCchHHHH
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH-------AEEGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~-------~~~~~fD~I~i~~~~~~i~~~l 79 (156)
+|+..| .+|++++.+++.++.+++ +|.+. ++..+ +.+ .....+|.+|-+.+.. .....
T Consensus 179 ~a~~~G--a~Vi~~~~~~~~~~~~~~-----~ga~~-----v~~~~--~~~~~~v~~~~~~~g~Dvvid~~g~~-~~~~~ 243 (342)
T 4eye_A 179 IAKGMG--AKVIAVVNRTAATEFVKS-----VGADI-----VLPLE--EGWAKAVREATGGAGVDMVVDPIGGP-AFDDA 243 (342)
T ss_dssp HHHHTT--CEEEEEESSGGGHHHHHH-----HTCSE-----EEESS--TTHHHHHHHHTTTSCEEEEEESCC---CHHHH
T ss_pred HHHHcC--CEEEEEeCCHHHHHHHHh-----cCCcE-----EecCc--hhHHHHHHHHhCCCCceEEEECCchh-HHHHH
Confidence 455555 699999999998877764 25432 22222 111 1123699999877764 44567
Q ss_pred HhhCCCCcEEEEEe
Q psy14971 80 LAQLKPGGRLVFHK 93 (156)
Q Consensus 80 ~~~L~pGGrLv~~~ 93 (156)
++.|++||+++..-
T Consensus 244 ~~~l~~~G~iv~~G 257 (342)
T 4eye_A 244 VRTLASEGRLLVVG 257 (342)
T ss_dssp HHTEEEEEEEEEC-
T ss_pred HHhhcCCCEEEEEE
Confidence 88999999999853
No 349
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=84.74 E-value=2.1 Score=34.02 Aligned_cols=79 Identities=10% Similarity=0.005 Sum_probs=48.5
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC---CCC--CCCCcCEEEEccCCCch
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK---GHA--EEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~---~~~--~~~~fD~I~i~~~~~~i 75 (156)
|.+++ +|+..| ++|++++.+++.++.+++ +|.+. ++..+-.+ ... ....+|.+|-+.+. ..
T Consensus 177 G~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~-----~Ga~~-----~~~~~~~~~~~~~~~~~~~g~D~vid~~g~-~~ 243 (362)
T 2c0c_A 177 GQFAMQLSKKAK--CHVIGTCSSDEKSAFLKS-----LGCDR-----PINYKTEPVGTVLKQEYPEGVDVVYESVGG-AM 243 (362)
T ss_dssp HHHHHHHHHHTT--CEEEEEESSHHHHHHHHH-----TTCSE-----EEETTTSCHHHHHHHHCTTCEEEEEECSCT-HH
T ss_pred HHHHHHHHHhCC--CEEEEEECCHHHHHHHHH-----cCCcE-----EEecCChhHHHHHHHhcCCCCCEEEECCCH-HH
Confidence 33443 345554 689999999988877763 35432 12111111 000 12469999987775 44
Q ss_pred HHHHHhhCCCCcEEEEEe
Q psy14971 76 PKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 ~~~l~~~L~pGGrLv~~~ 93 (156)
.+..++.|+++|+++..-
T Consensus 244 ~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 244 FDLAVDALATKGRLIVIG 261 (362)
T ss_dssp HHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHHhcCCEEEEEe
Confidence 556788999999998854
No 350
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.62 E-value=2.1 Score=33.28 Aligned_cols=74 Identities=8% Similarity=-0.008 Sum_probs=47.0
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CCC---CCCCCcCEEEEccCCCchHHHHHhh
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KGH---AEEGPYDIIHLGAACIEVPKEILAQ 82 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~~---~~~~~fD~I~i~~~~~~i~~~l~~~ 82 (156)
+...| .+|++++.+++.++.+++ +|.+. .+-..|.. +.. .....+|.++-+++ .......++.
T Consensus 161 a~~~G--~~V~~~~~~~~~~~~~~~-----~g~~~----~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~ 228 (327)
T 1qor_A 161 AKALG--AKLIGTVGTAQKAQSALK-----AGAWQ----VINYREEDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDC 228 (327)
T ss_dssp HHHHT--CEEEEEESSHHHHHHHHH-----HTCSE----EEETTTSCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHT
T ss_pred HHHcC--CEEEEEeCCHHHHHHHHH-----cCCCE----EEECCCccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHH
Confidence 44455 699999999988877764 24321 12111110 000 01236999999888 5566678899
Q ss_pred CCCCcEEEEEe
Q psy14971 83 LKPGGRLVFHK 93 (156)
Q Consensus 83 L~pGGrLv~~~ 93 (156)
|++||+++..-
T Consensus 229 l~~~G~iv~~g 239 (327)
T 1qor_A 229 LQRRGLMVSFG 239 (327)
T ss_dssp EEEEEEEEECC
T ss_pred hcCCCEEEEEe
Confidence 99999998754
No 351
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=84.38 E-value=0.39 Score=38.47 Aligned_cols=74 Identities=12% Similarity=-0.007 Sum_probs=42.9
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC---CCCCCCCcCEEEEccCCC-chHHHHHhh
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK---GHAEEGPYDIIHLGAACI-EVPKEILAQ 82 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~---~~~~~~~fD~I~i~~~~~-~i~~~l~~~ 82 (156)
+|+..| ++|++++ +++..+.++ + +|.+. ++.-+-.+ .......+|.+|-+.+.. ..-...++.
T Consensus 203 la~~~G--a~Vi~~~-~~~~~~~~~----~-lGa~~-----v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~ 269 (375)
T 2vn8_A 203 VMKAWD--AHVTAVC-SQDASELVR----K-LGADD-----VIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLK 269 (375)
T ss_dssp HHHHTT--CEEEEEE-CGGGHHHHH----H-TTCSE-----EEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBC
T ss_pred HHHhCC--CEEEEEe-ChHHHHHHH----H-cCCCE-----EEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHh
Confidence 355555 6899998 566555553 4 46432 12111111 011124699999877665 222455678
Q ss_pred CCCCcEEEEEe
Q psy14971 83 LKPGGRLVFHK 93 (156)
Q Consensus 83 L~pGGrLv~~~ 93 (156)
|++||+++..-
T Consensus 270 l~~~G~iv~~g 280 (375)
T 2vn8_A 270 KWSGATYVTLV 280 (375)
T ss_dssp SSSCCEEEESC
T ss_pred hcCCcEEEEeC
Confidence 99999998853
No 352
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=84.31 E-value=2.5 Score=34.68 Aligned_cols=79 Identities=10% Similarity=0.037 Sum_probs=48.4
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--------------------C---
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--------------------H--- 57 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--------------------~--- 57 (156)
|.+++ +|+..| ++|++++.+++.++.+++ +|.+. ++.-...+. .
T Consensus 242 G~~avqlak~~G--a~vi~~~~~~~~~~~~~~-----lGa~~-----vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~ 309 (456)
T 3krt_A 242 GSYATQFALAGG--ANPICVVSSPQKAEICRA-----MGAEA-----IIDRNAEGYRFWKDENTQDPKEWKRFGKRIREL 309 (456)
T ss_dssp HHHHHHHHHHTT--CEEEEEESSHHHHHHHHH-----HTCCE-----EEETTTTTCCSEEETTEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CeEEEEECCHHHHHHHHh-----hCCcE-----EEecCcCcccccccccccchHHHHHHHHHHHHH
Confidence 34444 355554 699999999998887753 35432 121111000 0
Q ss_pred CCCCCcCEEEEccCCCchHHHHHhhCCCCcEEEEEe
Q psy14971 58 AEEGPYDIIHLGAACIEVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 58 ~~~~~fD~I~i~~~~~~i~~~l~~~L~pGGrLv~~~ 93 (156)
.....+|++|-..+. ......++.|++||+++..-
T Consensus 310 t~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 310 TGGEDIDIVFEHPGR-ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HTSCCEEEEEECSCH-HHHHHHHHHEEEEEEEEESC
T ss_pred hCCCCCcEEEEcCCc-hhHHHHHHHhhCCcEEEEEe
Confidence 112479999877665 44556788999999999854
No 353
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=84.22 E-value=1.4 Score=34.81 Aligned_cols=74 Identities=16% Similarity=-0.009 Sum_probs=47.3
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC------CCCcCEEEEccCCCchHHHHH
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE------EGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~------~~~fD~I~i~~~~~~i~~~l~ 80 (156)
+|+..| ++|++++.+++.++.+++ +|.+. ++..+..+ +.+ ...+|.+|-+.+.. .....+
T Consensus 187 ~a~~~G--a~Vi~~~~~~~~~~~~~~-----lGa~~-----~~~~~~~~-~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~ 252 (353)
T 4dup_A 187 LARAFG--AEVYATAGSTGKCEACER-----LGAKR-----GINYRSED-FAAVIKAETGQGVDIILDMIGAA-YFERNI 252 (353)
T ss_dssp HHHHTT--CEEEEEESSHHHHHHHHH-----HTCSE-----EEETTTSC-HHHHHHHHHSSCEEEEEESCCGG-GHHHHH
T ss_pred HHHHcC--CEEEEEeCCHHHHHHHHh-----cCCCE-----EEeCCchH-HHHHHHHHhCCCceEEEECCCHH-HHHHHH
Confidence 355555 689999999998887764 25322 12111111 100 24699999877754 445678
Q ss_pred hhCCCCcEEEEEec
Q psy14971 81 AQLKPGGRLVFHKG 94 (156)
Q Consensus 81 ~~L~pGGrLv~~~~ 94 (156)
+.|+++|+++..-.
T Consensus 253 ~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 253 ASLAKDGCLSIIAF 266 (353)
T ss_dssp HTEEEEEEEEECCC
T ss_pred HHhccCCEEEEEEe
Confidence 89999999988543
No 354
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=84.19 E-value=2.2 Score=33.25 Aligned_cols=71 Identities=13% Similarity=0.064 Sum_probs=45.9
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC-C-------CCCCCcCEEEEccCCCchHHHH
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG-H-------AEEGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~-~-------~~~~~fD~I~i~~~~~~i~~~l 79 (156)
+...| .+|++++.+++.++.+++ +|.+. .+ |..+. . .....+|.+|-+++. ...+..
T Consensus 166 a~~~G--~~Vi~~~~~~~~~~~~~~-----~g~~~----~~---d~~~~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~ 230 (333)
T 1wly_A 166 ARHLG--ATVIGTVSTEEKAETARK-----LGCHH----TI---NYSTQDFAEVVREITGGKGVDVVYDSIGK-DTLQKS 230 (333)
T ss_dssp HHHTT--CEEEEEESSHHHHHHHHH-----HTCSE----EE---ETTTSCHHHHHHHHHTTCCEEEEEECSCT-TTHHHH
T ss_pred HHHCC--CEEEEEeCCHHHHHHHHH-----cCCCE----EE---ECCCHHHHHHHHHHhCCCCCeEEEECCcH-HHHHHH
Confidence 44444 699999999988877754 24321 11 21110 0 012369999988776 455677
Q ss_pred HhhCCCCcEEEEEe
Q psy14971 80 LAQLKPGGRLVFHK 93 (156)
Q Consensus 80 ~~~L~pGGrLv~~~ 93 (156)
++.|++||+++..-
T Consensus 231 ~~~l~~~G~iv~~g 244 (333)
T 1wly_A 231 LDCLRPRGMCAAYG 244 (333)
T ss_dssp HHTEEEEEEEEECC
T ss_pred HHhhccCCEEEEEe
Confidence 88999999998754
No 355
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.89 E-value=1.1 Score=35.89 Aligned_cols=77 Identities=16% Similarity=0.075 Sum_probs=46.6
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc------hHHHHHh
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE------VPKEILA 81 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~------i~~~l~~ 81 (156)
+...| .+|+.+|++++.++.+++.... . +..+..+..+.......+|.|+.+.+.+. +.+...+
T Consensus 186 a~~~G--a~V~v~dr~~~r~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~ 255 (361)
T 1pjc_A 186 AVGLG--AQVQIFDINVERLSYLETLFGS-----R---VELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVE 255 (361)
T ss_dssp HHHTT--CEEEEEESCHHHHHHHHHHHGG-----G---SEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHT
T ss_pred HHhCC--CEEEEEeCCHHHHHHHHHhhCc-----e---eEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHh
Confidence 34444 5999999999988888765432 1 32222110000001135899988765543 2456678
Q ss_pred hCCCCcEEEEEec
Q psy14971 82 QLKPGGRLVFHKG 94 (156)
Q Consensus 82 ~L~pGGrLv~~~~ 94 (156)
.+++||+++-...
T Consensus 256 ~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 256 QMRTGSVIVDVAV 268 (361)
T ss_dssp TSCTTCEEEETTC
T ss_pred hCCCCCEEEEEec
Confidence 9999998877543
No 356
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=83.82 E-value=1.3 Score=34.44 Aligned_cols=75 Identities=9% Similarity=0.082 Sum_probs=46.6
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccC-CCCCC--CCCCcCEEEEccCCCchHHHHHhhC
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDG-SKGHA--EEGPYDIIHLGAACIEVPKEILAQL 83 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~-~~~~~--~~~~fD~I~i~~~~~~i~~~l~~~L 83 (156)
+|+..| .+|++++.+++.++.+++ +|.+. + +-..+. .+... ....+|.+|-..+. ......++.|
T Consensus 170 ~a~~~G--a~vi~~~~~~~~~~~~~~-----lGa~~---v-~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l 237 (330)
T 1tt7_A 170 MLNKRG--YDVVASTGNREAADYLKQ-----LGASE---V-ISREDVYDGTLKALSKQQWQGAVDPVGG-KQLASLLSKI 237 (330)
T ss_dssp HHHHHT--CCEEEEESSSSTHHHHHH-----HTCSE---E-EEHHHHCSSCCCSSCCCCEEEEEESCCT-HHHHHHHTTE
T ss_pred HHHHCC--CEEEEEeCCHHHHHHHHH-----cCCcE---E-EECCCchHHHHHHhhcCCccEEEECCcH-HHHHHHHHhh
Confidence 455666 579999999888777753 25432 2 111111 11111 12469999887765 3445678899
Q ss_pred CCCcEEEEEe
Q psy14971 84 KPGGRLVFHK 93 (156)
Q Consensus 84 ~pGGrLv~~~ 93 (156)
++||+++..-
T Consensus 238 ~~~G~iv~~G 247 (330)
T 1tt7_A 238 QYGGSVAVSG 247 (330)
T ss_dssp EEEEEEEECC
T ss_pred cCCCEEEEEe
Confidence 9999998753
No 357
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=83.21 E-value=4.3 Score=32.70 Aligned_cols=81 Identities=10% Similarity=-0.007 Sum_probs=48.9
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC------CCCCCCcCEEEEccCCC-
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG------HAEEGPYDIIHLGAACI- 73 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~------~~~~~~fD~I~i~~~~~- 73 (156)
|.+++ +|+..|. .+|+++|.+++.++.+++ +|.+. ++..+..+. ......+|.||-..+..
T Consensus 226 G~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~-----lGa~~-----vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~ 294 (404)
T 3ip1_A 226 GLAAVAILKHAGA-SKVILSEPSEVRRNLAKE-----LGADH-----VIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQ 294 (404)
T ss_dssp HHHHHHHHHHTTC-SEEEEECSCHHHHHHHHH-----HTCSE-----EECTTTSCHHHHHHHHTTTCCCSEEEECSSCHH
T ss_pred HHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH-----cCCCE-----EEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcH
Confidence 44444 4556652 499999999998888763 35432 221111110 01123699999877765
Q ss_pred chHHHHHhhC----CCCcEEEEEe
Q psy14971 74 EVPKEILAQL----KPGGRLVFHK 93 (156)
Q Consensus 74 ~i~~~l~~~L----~pGGrLv~~~ 93 (156)
...+.+.+.| ++||+++..-
T Consensus 295 ~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 295 LVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp HHHHHHHHHHHHCSCCCCEEEECS
T ss_pred HHHHHHHHHHHhccCCCcEEEEeC
Confidence 2444555566 9999999853
No 358
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=83.15 E-value=0.17 Score=40.09 Aligned_cols=79 Identities=14% Similarity=0.066 Sum_probs=48.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC------CCCcCEEEEccCCCc
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE------EGPYDIIHLGAACIE 74 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~------~~~fD~I~i~~~~~~ 74 (156)
|.+++ +|+..|. .+|++++.+++.++.+++. .. . ++..+. +.+.+ ...+|.||-..+...
T Consensus 177 G~~~~q~a~~~Ga-~~Vi~~~~~~~~~~~~~~l-a~-----~-----v~~~~~-~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 177 GLMAAMVVRASGA-GPILVSDPNPYRLAFARPY-AD-----R-----LVNPLE-EDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp HHHHHHHHHHTTC-CSEEEECSCHHHHGGGTTT-CS-----E-----EECTTT-SCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred HHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh-HH-----h-----ccCcCc-cCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 33443 4555552 3899999999887766543 11 1 111110 01100 236999998877655
Q ss_pred hHHHHHhhCCCCcEEEEEe
Q psy14971 75 VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 i~~~l~~~L~pGGrLv~~~ 93 (156)
..+..++.|+++|+++..-
T Consensus 244 ~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 244 AIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCEEEEEe
Confidence 5667789999999998753
No 359
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=83.06 E-value=0.55 Score=37.05 Aligned_cols=38 Identities=29% Similarity=0.521 Sum_probs=27.8
Q ss_pred CCCCCC-CCcCEEEEccCCC----chH-------------HHHHhhCCCCcEEEEE
Q psy14971 55 KGHAEE-GPYDIIHLGAACI----EVP-------------KEILAQLKPGGRLVFH 92 (156)
Q Consensus 55 ~~~~~~-~~fD~I~i~~~~~----~i~-------------~~l~~~L~pGGrLv~~ 92 (156)
-|+|.. +.||.||++..-+ ++- ...++.|+|||.+++-
T Consensus 203 lG~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~ 258 (324)
T 3trk_A 203 LGLPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR 258 (324)
T ss_dssp GCCCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE
T ss_pred cCCCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 355554 8999999998764 221 2346889999999986
No 360
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=81.94 E-value=0.28 Score=38.53 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=45.6
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CCCC--CCCCcCEEEEccCCCchHHHHHhhC
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KGHA--EEGPYDIIHLGAACIEVPKEILAQL 83 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~~~--~~~~fD~I~i~~~~~~i~~~l~~~L 83 (156)
++..| .+|++++.+++.++.+.+ . +|.+. .+-..+.. +... ..+.+|.++-+.+. ......++.|
T Consensus 170 a~~~G--a~Vi~~~~~~~~~~~~~~---~-~g~~~----~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l 238 (336)
T 4b7c_A 170 ARLKG--CRVVGIAGGAEKCRFLVE---E-LGFDG----AIDYKNEDLAAGLKRECPKGIDVFFDNVGG-EILDTVLTRI 238 (336)
T ss_dssp HHHTT--CEEEEEESSHHHHHHHHH---T-TCCSE----EEETTTSCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTE
T ss_pred HHHCC--CEEEEEeCCHHHHHHHHH---H-cCCCE----EEECCCHHHHHHHHHhcCCCceEEEECCCc-chHHHHHHHH
Confidence 44444 699999999988776633 3 35422 12111110 0000 02469999887764 3455678899
Q ss_pred CCCcEEEEEe
Q psy14971 84 KPGGRLVFHK 93 (156)
Q Consensus 84 ~pGGrLv~~~ 93 (156)
++||+++..-
T Consensus 239 ~~~G~iv~~G 248 (336)
T 4b7c_A 239 AFKARIVLCG 248 (336)
T ss_dssp EEEEEEEECC
T ss_pred hhCCEEEEEe
Confidence 9999999853
No 361
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=81.34 E-value=3.4 Score=33.43 Aligned_cols=63 Identities=21% Similarity=0.140 Sum_probs=43.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--------CCCCcCEEEEccCCC
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--------EEGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--------~~~~fD~I~i~~~~~ 73 (156)
|-+++-++..| ...|.++|+++...+..+.|+. + ..++.+|..+... ....+|+|+.+.+|.
T Consensus 13 GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~------~---~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ 82 (376)
T 3g7u_A 13 GGLSLGAARAG-FDVKMAVEIDQHAINTHAINFP------R---SLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQ 82 (376)
T ss_dssp SHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCT------T---SEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCC
T ss_pred CHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCC------C---CceEecChhhcCHHHHHhhcccCCCeeEEEecCCCC
Confidence 44555444555 3568899999998887777753 3 5677888765432 135799999999886
Q ss_pred c
Q psy14971 74 E 74 (156)
Q Consensus 74 ~ 74 (156)
.
T Consensus 83 ~ 83 (376)
T 3g7u_A 83 G 83 (376)
T ss_dssp T
T ss_pred C
Confidence 3
No 362
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=81.10 E-value=13 Score=28.42 Aligned_cols=58 Identities=9% Similarity=-0.032 Sum_probs=41.0
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
+...+.+|+.++++++..+.+++..+. .+ + +.++.+|..+... ..+..|.++.+++..
T Consensus 53 la~~G~~V~~~~r~~~~~~~~~~~~~~-~~--~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 53 AREAGAELAFTYQGDALKKRVEPLAEE-LG--A---FVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp HHHTTCEEEEEECSHHHHHHHHHHHHH-HT--C---EEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred HHHCCCEEEEEcCCHHHHHHHHHHHHh-cC--C---ceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 444567999999998777766666555 33 5 8899999875211 125789999998764
No 363
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=80.87 E-value=3.1 Score=33.99 Aligned_cols=49 Identities=16% Similarity=0.024 Sum_probs=36.4
Q ss_pred CchHHHH-H-HhcCCCCEEEEEeCCHHHHHHHHHHHhhhc---CC-CCccceEEEEccC
Q psy14971 1 MGDLNVI-V-GIKGERALVLILNHYMKVKSKNQNNKKLNI---KQ-NRKSFKNVSVKDG 53 (156)
Q Consensus 1 ~G~la~l-a-~l~g~~g~V~avD~~~~~~~~A~~~l~~~~---g~-~n~~~v~~~~gD~ 53 (156)
.|+.++. + +..++.++|+++|-+|+..+..++|++. + +. +| ++++..-+
T Consensus 237 ~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~-~~N~~~~~~---v~~~~~al 291 (409)
T 2py6_A 237 IGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR-YTDTNFASR---ITVHGCGA 291 (409)
T ss_dssp TSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH-TTTSTTGGG---EEEECSEE
T ss_pred cCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh-hhccCCCCC---EEEEEeEE
Confidence 3777765 4 3455558999999999999999999986 2 24 56 88776443
No 364
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=80.74 E-value=3.5 Score=33.62 Aligned_cols=75 Identities=9% Similarity=0.051 Sum_probs=46.3
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEcc--CCCC------------------CC--CCCCcC
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKD--GSKG------------------HA--EEGPYD 64 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD--~~~~------------------~~--~~~~fD 64 (156)
+|+..| ++|++++.+++.++.++ + +|.+. + +-..+ ..+. .. ....+|
T Consensus 240 la~~~G--a~vi~~~~~~~~~~~~~----~-lGa~~---~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~D 308 (447)
T 4a0s_A 240 FVKNGG--GIPVAVVSSAQKEAAVR----A-LGCDL---V-INRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPD 308 (447)
T ss_dssp HHHHTT--CEEEEEESSHHHHHHHH----H-TTCCC---E-EEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCS
T ss_pred HHHHcC--CEEEEEeCCHHHHHHHH----h-cCCCE---E-EecccccccccccccccccchhhhHHHHHHHHHhCCCce
Confidence 345554 69999999999888774 3 36533 2 21111 1000 00 024699
Q ss_pred EEEEccCCCchHHHHHhhCCCCcEEEEEe
Q psy14971 65 IIHLGAACIEVPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 65 ~I~i~~~~~~i~~~l~~~L~pGGrLv~~~ 93 (156)
.+|-..+.. .....++.|++||+++..-
T Consensus 309 vvid~~G~~-~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 309 IVFEHTGRV-TFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp EEEECSCHH-HHHHHHHHSCTTCEEEESC
T ss_pred EEEECCCch-HHHHHHHHHhcCCEEEEEe
Confidence 999877653 3456678999999999854
No 365
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=80.52 E-value=2.8 Score=33.13 Aligned_cols=30 Identities=23% Similarity=0.194 Sum_probs=22.9
Q ss_pred CcCEEEEccCCCchHHHHHhhCCCCcEEEEE
Q psy14971 62 PYDIIHLGAACIEVPKEILAQLKPGGRLVFH 92 (156)
Q Consensus 62 ~fD~I~i~~~~~~i~~~l~~~L~pGGrLv~~ 92 (156)
.+|.||-..+-... ...++.|++||+++..
T Consensus 240 ~~Dvvid~~g~~~~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 240 QPRLALNCVGGKSS-TELLRQLARGGTMVTY 269 (357)
T ss_dssp CCSEEEESSCHHHH-HHHHTTSCTTCEEEEC
T ss_pred CceEEEECCCcHHH-HHHHHhhCCCCEEEEE
Confidence 49999877664444 3467899999999885
No 366
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=79.38 E-value=8 Score=26.07 Aligned_cols=72 Identities=3% Similarity=-0.088 Sum_probs=47.5
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--CC--CCCCcCEEEEccCCCchHH---HHHhhCCC
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--HA--EEGPYDIIHLGAACIEVPK---EILAQLKP 85 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--~~--~~~~fD~I~i~~~~~~i~~---~l~~~L~p 85 (156)
.+..|+.+|.+++.++.+++ .| +.++.||+.+. +. .....|.+++..+-..... ...+.+.|
T Consensus 29 ~g~~v~vid~~~~~~~~~~~-----~g------~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~ 97 (140)
T 3fwz_A 29 SDIPLVVIETSRTRVDELRE-----RG------VRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNP 97 (140)
T ss_dssp TTCCEEEEESCHHHHHHHHH-----TT------CEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCHHHHHHHHH-----cC------CCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCC
Confidence 35689999999998876653 13 66788998652 11 1246899998766543221 23566778
Q ss_pred CcEEEEEecc
Q psy14971 86 GGRLVFHKGL 95 (156)
Q Consensus 86 GGrLv~~~~~ 95 (156)
+.++++-...
T Consensus 98 ~~~iiar~~~ 107 (140)
T 3fwz_A 98 DIEIIARAHY 107 (140)
T ss_dssp SSEEEEEESS
T ss_pred CCeEEEEECC
Confidence 8887776543
No 367
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=79.20 E-value=6.3 Score=31.72 Aligned_cols=82 Identities=9% Similarity=0.053 Sum_probs=48.8
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc--h---H
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE--V---P 76 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~--i---~ 76 (156)
|-|+|.+.. ..++.+.-+--.....+.|++++ ++++ +.+++.. ..+.. ...||.+++--+.+. + -
T Consensus 50 gal~~~~~~----~~~~~~~ds~~~~~~~~~n~~~~-~~~~-~~~~~~~--~~~~~--~~~~~~v~~~lpk~~~~l~~~L 119 (375)
T 4dcm_A 50 GALSCALAE----HKPYSIGDSYISELATRENLRLN-GIDE-SSVKFLD--STADY--PQQPGVVLIKVPKTLALLEQQL 119 (375)
T ss_dssp SHHHHHTGG----GCCEEEESCHHHHHHHHHHHHHT-TCCG-GGSEEEE--TTSCC--CSSCSEEEEECCSCHHHHHHHH
T ss_pred CHHHHhhcc----CCceEEEhHHHHHHHHHHHHHHc-CCCc-cceEecc--ccccc--ccCCCEEEEEcCCCHHHHHHHH
Confidence 555554332 24566644444445677899885 7643 0155543 22322 356999999776642 1 1
Q ss_pred HHHHhhCCCCcEEEEEe
Q psy14971 77 KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~ 93 (156)
..+...|++|+++++.-
T Consensus 120 ~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 120 RALRKVVTSDTRIIAGA 136 (375)
T ss_dssp HHHHTTCCTTSEEEEEE
T ss_pred HHHHhhCCCCCEEEEEe
Confidence 35678899999997754
No 368
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=79.12 E-value=1 Score=38.96 Aligned_cols=38 Identities=26% Similarity=0.528 Sum_probs=28.8
Q ss_pred CCCCCCCCcCEEEEccCCC----chH-------------HHHHhhCCCCcEEEEE
Q psy14971 55 KGHAEEGPYDIIHLGAACI----EVP-------------KEILAQLKPGGRLVFH 92 (156)
Q Consensus 55 ~~~~~~~~fD~I~i~~~~~----~i~-------------~~l~~~L~pGGrLv~~ 92 (156)
.|+|..+.||.||++..-+ ++- ...+..|+|||.+++-
T Consensus 214 lG~p~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~ 268 (670)
T 4gua_A 214 FGFPPQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVK 268 (670)
T ss_dssp GCCCCCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCCCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEE
Confidence 3677778999999998754 222 2347899999999986
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=77.93 E-value=5.9 Score=31.20 Aligned_cols=74 Identities=14% Similarity=0.085 Sum_probs=45.5
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CC---CCCCCCcCEEEEccCCCchHHHHHhh
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KG---HAEEGPYDIIHLGAACIEVPKEILAQ 82 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~---~~~~~~fD~I~i~~~~~~i~~~l~~~ 82 (156)
+...| .+|++++.+++.++.++ . +|.+ ..+-..+.. +. ......+|.+|-+++.. .....++.
T Consensus 183 a~~~G--a~Vi~~~~~~~~~~~~~----~-~g~~----~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~ 250 (354)
T 2j8z_A 183 TRMAG--AIPLVTAGSQKKLQMAE----K-LGAA----AGFNYKKEDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNC 250 (354)
T ss_dssp HHHTT--CEEEEEESCHHHHHHHH----H-HTCS----EEEETTTSCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHH
T ss_pred HHHcC--CEEEEEeCCHHHHHHHH----H-cCCc----EEEecCChHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHh
Confidence 44444 69999999999887774 2 2432 111111100 00 01123699999888765 34456889
Q ss_pred CCCCcEEEEEe
Q psy14971 83 LKPGGRLVFHK 93 (156)
Q Consensus 83 L~pGGrLv~~~ 93 (156)
|++||+++..-
T Consensus 251 l~~~G~iv~~G 261 (354)
T 2j8z_A 251 LALDGRWVLYG 261 (354)
T ss_dssp EEEEEEEEECC
T ss_pred ccCCCEEEEEe
Confidence 99999998853
No 370
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.53 E-value=1.4 Score=35.31 Aligned_cols=72 Identities=17% Similarity=0.046 Sum_probs=41.7
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCCc------hHHHHHhhCCCC
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACIE------VPKEILAQLKPG 86 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~~------i~~~l~~~L~pG 86 (156)
+.+|+.+|++++.++.+++.+ +. . +.....+..+ +.+ ....|.|+.+.+.+. +.+...+.+++|
T Consensus 189 Ga~V~~~d~~~~~~~~~~~~~----g~-~---~~~~~~~~~~-l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~g 259 (369)
T 2eez_A 189 GAQVTILDVNHKRLQYLDDVF----GG-R---VITLTATEAN-IKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEG 259 (369)
T ss_dssp TCEEEEEESCHHHHHHHHHHT----TT-S---EEEEECCHHH-HHHHHHHCSEEEECCC-------CCSCHHHHTTSCTT
T ss_pred CCEEEEEECCHHHHHHHHHhc----Cc-e---EEEecCCHHH-HHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCC
Confidence 369999999998877665432 32 2 3222211100 111 135799988876543 245678889999
Q ss_pred cEEEEEec
Q psy14971 87 GRLVFHKG 94 (156)
Q Consensus 87 GrLv~~~~ 94 (156)
|++|....
T Consensus 260 g~iV~v~~ 267 (369)
T 2eez_A 260 AVIVDVAV 267 (369)
T ss_dssp CEEEECC-
T ss_pred CEEEEEec
Confidence 98776543
No 371
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=77.29 E-value=1.8 Score=34.02 Aligned_cols=72 Identities=13% Similarity=0.003 Sum_probs=46.8
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CCCC----C--CCCcCEEEEccCCCchHHHH
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KGHA----E--EGPYDIIHLGAACIEVPKEI 79 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~~~----~--~~~fD~I~i~~~~~~i~~~l 79 (156)
+...| .+|++++.+++.++.+++ +|.+. .+ |.. +.+. . .+.+|.++.+.+.....+..
T Consensus 190 a~~~G--a~V~~~~~~~~~~~~~~~-----~g~~~----~~---d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~ 255 (347)
T 2hcy_A 190 AKAMG--YRVLGIDGGEGKEELFRS-----IGGEV----FI---DFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEAS 255 (347)
T ss_dssp HHHTT--CEEEEEECSTTHHHHHHH-----TTCCE----EE---ETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHH
T ss_pred HHHCC--CcEEEEcCCHHHHHHHHH-----cCCce----EE---ecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHH
Confidence 44444 699999999887766653 35322 11 322 1110 0 12699999988875666778
Q ss_pred HhhCCCCcEEEEEe
Q psy14971 80 LAQLKPGGRLVFHK 93 (156)
Q Consensus 80 ~~~L~pGGrLv~~~ 93 (156)
.+.|+++|+++..-
T Consensus 256 ~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 256 TRYVRANGTTVLVG 269 (347)
T ss_dssp TTSEEEEEEEEECC
T ss_pred HHHHhcCCEEEEEe
Confidence 89999999998753
No 372
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=77.04 E-value=1.2 Score=35.53 Aligned_cols=79 Identities=9% Similarity=0.018 Sum_probs=46.8
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC---CC--CCCCcCEEEEccCCCch
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG---HA--EEGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~---~~--~~~~fD~I~i~~~~~~i 75 (156)
|.+++ +|++.| .+|+++- +++.++.++ + +|.+. ++.-+..+. .. ..+.+|.+|-..+....
T Consensus 178 G~~a~qla~~~G--a~Vi~~~-~~~~~~~~~----~-lGa~~-----vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~ 244 (371)
T 3gqv_A 178 ATVTMQMLRLSG--YIPIATC-SPHNFDLAK----S-RGAEE-----VFDYRAPNLAQTIRTYTKNNLRYALDCITNVES 244 (371)
T ss_dssp HHHHHHHHHHTT--CEEEEEE-CGGGHHHHH----H-TTCSE-----EEETTSTTHHHHHHHHTTTCCCEEEESSCSHHH
T ss_pred HHHHHHHHHHCC--CEEEEEe-CHHHHHHHH----H-cCCcE-----EEECCCchHHHHHHHHccCCccEEEECCCchHH
Confidence 33443 455665 5898885 777666554 3 46532 222111110 00 12349999987776665
Q ss_pred HHHHHhhC-CCCcEEEEEe
Q psy14971 76 PKEILAQL-KPGGRLVFHK 93 (156)
Q Consensus 76 ~~~l~~~L-~pGGrLv~~~ 93 (156)
.+..++.| ++||+++..-
T Consensus 245 ~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 245 TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp HHHHHHHSCTTCEEEEESS
T ss_pred HHHHHHHhhcCCCEEEEEe
Confidence 66677888 6999998753
No 373
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=76.68 E-value=11 Score=28.17 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=53.6
Q ss_pred HhcCCCCEEEEEeCC------------HHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEE
Q psy14971 9 GIKGERALVLILNHY------------MKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDII 66 (156)
Q Consensus 9 ~l~g~~g~V~avD~~------------~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I 66 (156)
++...+.+|+.++++ .+.++.+...++. .+ .+ +.++.+|..+... ..++.|.+
T Consensus 29 ~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 103 (287)
T 3pxx_A 29 KLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-TG-RK---AYTAEVDVRDRAAVSRELANAVAEFGKLDVV 103 (287)
T ss_dssp HHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-TT-SC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred HHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh-cC-Cc---eEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 344456899999987 7777777777766 34 35 8999999875211 01478999
Q ss_pred EEccCCCch----H-------------------HHHHhhCCCCcEEEEEe
Q psy14971 67 HLGAACIEV----P-------------------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 67 ~i~~~~~~i----~-------------------~~l~~~L~pGGrLv~~~ 93 (156)
+.+++.... . ..+.+.++.+|++|...
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 104 VANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp EECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred EECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 999875321 0 12356677889988764
No 374
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=76.22 E-value=4.6 Score=29.80 Aligned_cols=59 Identities=10% Similarity=-0.038 Sum_probs=41.7
Q ss_pred hcC-CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 10 IKG-ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g-~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
++. .+.+|+.++++++..+...+.++. .+ .+ +.++.+|..+... ..+++|.++.+++..
T Consensus 24 L~~~~g~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 24 LCRLFSGDVVLTARDVTRGQAAVQQLQA-EG-LS---PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHSSSEEEEEESSHHHHHHHHHHHHH-TT-CC---CEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHhcCCeEEEEeCChHHHHHHHHHHHh-cC-Ce---eEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccc
Confidence 444 467999999999888877777766 34 35 8899999865210 013789999988653
No 375
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=76.05 E-value=1.6 Score=35.24 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=42.4
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCCc------hHHHHHhhCCCCc
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACIE------VPKEILAQLKPGG 87 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~~------i~~~l~~~L~pGG 87 (156)
.+|+++|++++.++.+++.+ |.. +.....+..+ +.+ ....|.|+.....+. +.+...+.+++||
T Consensus 192 a~V~~~d~~~~~l~~~~~~~----g~~----~~~~~~~~~~-l~~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~ 262 (377)
T 2vhw_A 192 ATVTVLDINIDKLRQLDAEF----CGR----IHTRYSSAYE-LEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGA 262 (377)
T ss_dssp CEEEEEESCHHHHHHHHHHT----TTS----SEEEECCHHH-HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTC
T ss_pred CEEEEEeCCHHHHHHHHHhc----CCe----eEeccCCHHH-HHHHHcCCCEEEECCCcCCCCCcceecHHHHhcCCCCc
Confidence 59999999999887776543 321 2221111000 111 134799998665443 2466788999999
Q ss_pred EEEEEe
Q psy14971 88 RLVFHK 93 (156)
Q Consensus 88 rLv~~~ 93 (156)
+++-..
T Consensus 263 ~iV~va 268 (377)
T 2vhw_A 263 VLVDIA 268 (377)
T ss_dssp EEEEGG
T ss_pred EEEEEe
Confidence 987654
No 376
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=75.35 E-value=1.2 Score=38.76 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=34.9
Q ss_pred eEEEEccCCCCCCC-----CCCcCEEEEccCCCc---------hHHHHHhhCCCCcEEEEEe
Q psy14971 46 KNVSVKDGSKGHAE-----EGPYDIIHLGAACIE---------VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 46 v~~~~gD~~~~~~~-----~~~fD~I~i~~~~~~---------i~~~l~~~L~pGGrLv~~~ 93 (156)
+++..||+.+.++. ...+|++|+++-.+. +...+.+.++|||++....
T Consensus 150 l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 150 LDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 77889998765543 367999999986543 2345678889999987654
No 377
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=75.10 E-value=2.4 Score=33.74 Aligned_cols=63 Identities=14% Similarity=0.122 Sum_probs=41.9
Q ss_pred chHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCC---CCcCEEEEccCCC
Q psy14971 2 GDLNVIVGIKGE-RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEE---GPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~la~l~g~-~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~---~~fD~I~i~~~~~ 73 (156)
|-+++-++..|- ...|+++|+++..++..+.|+.. ..++.+|..+..... ..+|.|+.+.+|.
T Consensus 13 Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq 79 (343)
T 1g55_A 13 GGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDMILMSPPCQ 79 (343)
T ss_dssp CHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSEEEECCC--
T ss_pred cHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCEEEEcCCCc
Confidence 445554444442 24799999999999999888643 346678876643211 1589999998864
No 378
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=74.68 E-value=13 Score=28.29 Aligned_cols=59 Identities=17% Similarity=0.058 Sum_probs=41.1
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
++...+.+|+.++++++..+.+++..+. .+ + +.++.+|..+... ..++.|.++.+++..
T Consensus 51 ~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~--~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 51 AVCAQGAEVALTYLSETFKKRVDPLAES-LG--V---KLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp HHHHTTCEEEEEESSGGGHHHHHHHHHH-HT--C---CEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHCCCEEEEEeCChHHHHHHHHHHHh-cC--C---eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 3444568999999998877766666655 33 4 7788899865211 015789999998764
No 379
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=73.64 E-value=1 Score=35.55 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=44.6
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC------CCCCCCcCEEEEccCCCchHHHHH
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG------HAEEGPYDIIHLGAACIEVPKEIL 80 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~------~~~~~~fD~I~i~~~~~~i~~~l~ 80 (156)
+|+..| .+|+++ .+++.++.++ + +|.+ . +. +..+. ......+|.+|-..+. ......+
T Consensus 170 ~a~~~G--a~Vi~~-~~~~~~~~~~----~-lGa~----~--i~-~~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~ 233 (343)
T 3gaz_A 170 IALARG--ARVFAT-ARGSDLEYVR----D-LGAT----P--ID-ASREPEDYAAEHTAGQGFDLVYDTLGG-PVLDASF 233 (343)
T ss_dssp HHHHTT--CEEEEE-ECHHHHHHHH----H-HTSE----E--EE-TTSCHHHHHHHHHTTSCEEEEEESSCT-HHHHHHH
T ss_pred HHHHCC--CEEEEE-eCHHHHHHHH----H-cCCC----E--ec-cCCCHHHHHHHHhcCCCceEEEECCCc-HHHHHHH
Confidence 355555 589999 8888776664 3 3532 2 22 21110 0112469999887764 4455677
Q ss_pred hhCCCCcEEEEEec
Q psy14971 81 AQLKPGGRLVFHKG 94 (156)
Q Consensus 81 ~~L~pGGrLv~~~~ 94 (156)
+.|+++|+++..-.
T Consensus 234 ~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 234 SAVKRFGHVVSCLG 247 (343)
T ss_dssp HHEEEEEEEEESCC
T ss_pred HHHhcCCeEEEEcc
Confidence 89999999998543
No 380
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=73.20 E-value=1 Score=35.73 Aligned_cols=50 Identities=22% Similarity=0.239 Sum_probs=35.5
Q ss_pred eEEE-EccCCCCCC--CCCCcCEEEEccCCCch--------------H---HHHHhhCCCCcEEEEEecc
Q psy14971 46 KNVS-VKDGSKGHA--EEGPYDIIHLGAACIEV--------------P---KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 46 v~~~-~gD~~~~~~--~~~~fD~I~i~~~~~~i--------------~---~~l~~~L~pGGrLv~~~~~ 95 (156)
.+++ +||+.+.+. ...+||+||++.+...- . ..+.+.|+|||.+++....
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 5677 999865322 24589999999875321 1 2457889999999998764
No 381
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=73.09 E-value=1 Score=35.91 Aligned_cols=49 Identities=18% Similarity=0.063 Sum_probs=35.4
Q ss_pred eEEEEccCCCCCCC--CCCcCEEEEccCCC-c--------hHHHHHhhCCCCcEEEEEec
Q psy14971 46 KNVSVKDGSKGHAE--EGPYDIIHLGAACI-E--------VPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 46 v~~~~gD~~~~~~~--~~~fD~I~i~~~~~-~--------i~~~l~~~L~pGGrLv~~~~ 94 (156)
+++..||+.+.++. ...||+||.|+=.+ . +...+.+.++|||+|+....
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYta 227 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSS 227 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCC
T ss_pred EEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeC
Confidence 56788998765544 34699999998332 2 23467889999999998654
No 382
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=72.93 E-value=9.1 Score=28.53 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=38.9
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
+...+.+|+.++++++.++...+.+. .+ +.++.+|..+... ..++.|.++.+++..
T Consensus 28 l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 93 (255)
T 4eso_A 28 LVEGGAEVLLTGRNESNIARIREEFG-----PR---VHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVS 93 (255)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHG-----GG---EEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHhC-----Cc---ceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 44456799999999987776665542 24 8889999865211 114789999988754
No 383
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=71.26 E-value=16 Score=23.55 Aligned_cols=73 Identities=10% Similarity=-0.029 Sum_probs=47.2
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcC-CCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH-----HHHHhhCCCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIK-QNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP-----KEILAQLKPG 86 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g-~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~-----~~l~~~L~pG 86 (156)
.+|.-+|-++...+..++.++. .| + + +. ...++.+.. ....+||+|+++...+... ..+ +...+.
T Consensus 15 ~~ilivdd~~~~~~~l~~~L~~-~g~~-~---v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l-~~~~~~ 87 (135)
T 3snk_A 15 KQVALFSSDPNFKRDVATRLDA-LAIY-D---VR-VSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEA-RALWAT 87 (135)
T ss_dssp EEEEEECSCHHHHHHHHHHHHH-TSSE-E---EE-EECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHH-HGGGTT
T ss_pred cEEEEEcCCHHHHHHHHHHHhh-cCCe-E---EE-EeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHH-HhhCCC
Confidence 5899999999999999999988 46 4 2 44 444443322 2346799999998776533 222 333444
Q ss_pred cEEEEEec
Q psy14971 87 GRLVFHKG 94 (156)
Q Consensus 87 GrLv~~~~ 94 (156)
-.+++...
T Consensus 88 ~~ii~~s~ 95 (135)
T 3snk_A 88 VPLIAVSD 95 (135)
T ss_dssp CCEEEEES
T ss_pred CcEEEEeC
Confidence 55555444
No 384
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=70.72 E-value=2.3 Score=33.14 Aligned_cols=70 Identities=13% Similarity=0.007 Sum_probs=42.6
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC---CC--CCCCcCEEEEccCCCchHHHHHhhCCCCcE
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG---HA--EEGPYDIIHLGAACIEVPKEILAQLKPGGR 88 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~---~~--~~~~fD~I~i~~~~~~i~~~l~~~L~pGGr 88 (156)
+.+|++++.+++.++.++ . +|.+ ..+-..|..+. .. ..+.+|.++.+++.. .....++.|++||+
T Consensus 170 G~~V~~~~~~~~~~~~~~----~-~g~~----~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~ 239 (333)
T 1v3u_A 170 GCKVVGAAGSDEKIAYLK----Q-IGFD----AAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGK 239 (333)
T ss_dssp TCEEEEEESSHHHHHHHH----H-TTCS----EEEETTSCSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHH----h-cCCc----EEEecCCHHHHHHHHHHHhCCCCeEEEECCChH-HHHHHHHHHhcCCE
Confidence 369999999998887763 2 3432 22211110000 00 014699999887753 34566789999999
Q ss_pred EEEEe
Q psy14971 89 LVFHK 93 (156)
Q Consensus 89 Lv~~~ 93 (156)
++..-
T Consensus 240 ~v~~g 244 (333)
T 1v3u_A 240 IAICG 244 (333)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 98753
No 385
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=70.32 E-value=4.4 Score=31.97 Aligned_cols=73 Identities=16% Similarity=0.063 Sum_probs=44.4
Q ss_pred HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC---C---CCCCCcCEEEEccCCCchHHHHHh
Q psy14971 8 VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG---H---AEEGPYDIIHLGAACIEVPKEILA 81 (156)
Q Consensus 8 a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~---~---~~~~~fD~I~i~~~~~~i~~~l~~ 81 (156)
+...| .+|++++.+++.++.++ . +|.+. .+-..+ .+. . .....+|.++-+++...+ ...++
T Consensus 191 a~~~G--a~Vi~~~~~~~~~~~~~----~-~ga~~----~~d~~~-~~~~~~~~~~~~~~~~D~vi~~~G~~~~-~~~~~ 257 (351)
T 1yb5_A 191 ARAYG--LKILGTAGTEEGQKIVL----Q-NGAHE----VFNHRE-VNYIDKIKKYVGEKGIDIIIEMLANVNL-SKDLS 257 (351)
T ss_dssp HHHTT--CEEEEEESSHHHHHHHH----H-TTCSE----EEETTS-TTHHHHHHHHHCTTCEEEEEESCHHHHH-HHHHH
T ss_pred HHHCC--CEEEEEeCChhHHHHHH----H-cCCCE----EEeCCC-chHHHHHHHHcCCCCcEEEEECCChHHH-HHHHH
Confidence 44444 69999999998887654 3 35322 111111 110 0 012369999988765433 45678
Q ss_pred hCCCCcEEEEEe
Q psy14971 82 QLKPGGRLVFHK 93 (156)
Q Consensus 82 ~L~pGGrLv~~~ 93 (156)
.|+++|+++..-
T Consensus 258 ~l~~~G~iv~~g 269 (351)
T 1yb5_A 258 LLSHGGRVIVVG 269 (351)
T ss_dssp HEEEEEEEEECC
T ss_pred hccCCCEEEEEe
Confidence 999999998753
No 386
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=69.85 E-value=0.86 Score=34.74 Aligned_cols=49 Identities=10% Similarity=0.093 Sum_probs=32.8
Q ss_pred eEEEEccCCCCCC--CCCCcCEEEEccCCCch--------------------HHHHHhhCCCCcEEEEEec
Q psy14971 46 KNVSVKDGSKGHA--EEGPYDIIHLGAACIEV--------------------PKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 46 v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i--------------------~~~l~~~L~pGGrLv~~~~ 94 (156)
.++++||+.+.+. ..++||+||++.+...- ...+.+.|+|||.+++...
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~ 75 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT 75 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC
Confidence 4578888754321 23579999998875311 1234688999999999753
No 387
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=68.88 E-value=4.8 Score=31.65 Aligned_cols=74 Identities=7% Similarity=0.073 Sum_probs=44.5
Q ss_pred HHhcCCCC-EEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCC--CCCC--CCCCcCEEEEccCCCchHHHHHhh
Q psy14971 8 VGIKGERA-LVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGS--KGHA--EEGPYDIIHLGAACIEVPKEILAQ 82 (156)
Q Consensus 8 a~l~g~~g-~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~--~~~~--~~~~fD~I~i~~~~~~i~~~l~~~ 82 (156)
+...| . +|++++.+++.++.+++. +|.+ ..+-..+.. +... ..+.+|.++-+.+. ......++.
T Consensus 181 a~~~G--a~~Vi~~~~~~~~~~~~~~~----~g~~----~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~ 249 (357)
T 2zb4_A 181 GHFLG--CSRVVGICGTHEKCILLTSE----LGFD----AAINYKKDNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQ 249 (357)
T ss_dssp HHHTT--CSEEEEEESCHHHHHHHHHT----SCCS----EEEETTTSCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHT
T ss_pred HHHCC--CCeEEEEeCCHHHHHHHHHH----cCCc----eEEecCchHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHH
Confidence 44444 5 999999999877776643 2432 111111100 0000 01269999988774 444567889
Q ss_pred CCCCcEEEEE
Q psy14971 83 LKPGGRLVFH 92 (156)
Q Consensus 83 L~pGGrLv~~ 92 (156)
|++||+++..
T Consensus 250 l~~~G~iv~~ 259 (357)
T 2zb4_A 250 MNENSHIILC 259 (357)
T ss_dssp EEEEEEEEEC
T ss_pred hccCcEEEEE
Confidence 9999999875
No 388
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=68.82 E-value=33 Score=25.88 Aligned_cols=68 Identities=13% Similarity=-0.061 Sum_probs=42.3
Q ss_pred chHHH-H-HHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEE-EccCCCCC--CC-CCCcCEEEEccCCC
Q psy14971 2 GDLNV-I-VGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVS-VKDGSKGH--AE-EGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~-l-a~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~-~gD~~~~~--~~-~~~fD~I~i~~~~~ 73 (156)
|++.. + ..++..+.+|++++++++-.+...+.+....+ .+ ++++ .+|..+.. .. ...+|.||..++..
T Consensus 21 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~---~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~ 94 (342)
T 1y1p_A 21 GFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP-GR---FETAVVEDMLKQGAYDEVIKGAAGVAHIASVV 94 (342)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST-TT---EEEEECSCTTSTTTTTTTTTTCSEEEECCCCC
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC-Cc---eEEEEecCCcChHHHHHHHcCCCEEEEeCCCC
Confidence 56652 3 33444557999999998766555544433112 35 8888 78976532 11 23689999988754
No 389
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=68.31 E-value=11 Score=24.74 Aligned_cols=75 Identities=11% Similarity=0.142 Sum_probs=48.0
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcC-CCCccceEEEEccCCC---CCCCC-CCcCEEEEccCCCchHH-HHH---hhCC
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIK-QNRKSFKNVSVKDGSK---GHAEE-GPYDIIHLGAACIEVPK-EIL---AQLK 84 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g-~~n~~~v~~~~gD~~~---~~~~~-~~fD~I~i~~~~~~i~~-~l~---~~L~ 84 (156)
..+|.-+|-++...+..++.++. .| + . +.. ..++.+ .+... .+||+|+++...+.... .+. +...
T Consensus 20 ~~~ilivdd~~~~~~~l~~~L~~-~g~~-~---v~~-~~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~ 93 (146)
T 4dad_A 20 MINILVASEDASRLAHLARLVGD-AGRY-R---VTR-TVGRAAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLH 93 (146)
T ss_dssp GCEEEEECSCHHHHHHHHHHHHH-HCSC-E---EEE-ECCCHHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCHHHHHHHHHHHhh-CCCe-E---EEE-eCCHHHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhC
Confidence 46899999999999999999988 46 4 2 332 334332 22223 67999999998876431 222 2234
Q ss_pred CCcEEEEEec
Q psy14971 85 PGGRLVFHKG 94 (156)
Q Consensus 85 pGGrLv~~~~ 94 (156)
+.-.+++...
T Consensus 94 ~~~~ii~lt~ 103 (146)
T 4dad_A 94 PGLTCLLVTT 103 (146)
T ss_dssp TTCEEEEEES
T ss_pred CCCcEEEEeC
Confidence 5666666554
No 390
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=67.84 E-value=22 Score=24.01 Aligned_cols=78 Identities=6% Similarity=-0.080 Sum_probs=48.1
Q ss_pred hcCCCCEEEEEeCC-HHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--C--CCCCcCEEEEccCCCchHH---HHHh
Q psy14971 10 IKGERALVLILNHY-MKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--A--EEGPYDIIHLGAACIEVPK---EILA 81 (156)
Q Consensus 10 l~g~~g~V~avD~~-~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~--~~~~fD~I~i~~~~~~i~~---~l~~ 81 (156)
+...+..|+.+|.+ ++..+..++.+.. . +.++.||+.+.. . .....|.|++...-..... ...+
T Consensus 22 L~~~g~~V~vid~~~~~~~~~~~~~~~~-----~---~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~ 93 (153)
T 1id1_A 22 LNQRGQNVTVISNLPEDDIKQLEQRLGD-----N---ADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAK 93 (153)
T ss_dssp HHHTTCCEEEEECCCHHHHHHHHHHHCT-----T---CEEEESCTTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEECCChHHHHHHHHhhcC-----C---CeEEEcCCCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHH
Confidence 33345689999998 4655544443322 3 778999986421 1 1356899998776543332 3356
Q ss_pred hCCCCcEEEEEecc
Q psy14971 82 QLKPGGRLVFHKGL 95 (156)
Q Consensus 82 ~L~pGGrLv~~~~~ 95 (156)
.+.|..++++-...
T Consensus 94 ~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 94 DMSSDVKTVLAVSD 107 (153)
T ss_dssp HHTSSSCEEEECSS
T ss_pred HHCCCCEEEEEECC
Confidence 67777788776543
No 391
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=67.43 E-value=6.7 Score=30.56 Aligned_cols=46 Identities=9% Similarity=-0.039 Sum_probs=30.6
Q ss_pred eEEEEc-cCCCCCCCCCCcCEEEEccCCCc-hH-----------HHHHhhCCCCc-EEEEEe
Q psy14971 46 KNVSVK-DGSKGHAEEGPYDIIHLGAACIE-VP-----------KEILAQLKPGG-RLVFHK 93 (156)
Q Consensus 46 v~~~~g-D~~~~~~~~~~fD~I~i~~~~~~-i~-----------~~l~~~L~pGG-rLv~~~ 93 (156)
+.|..| |..+ .+..++|.|+++++... .+ +-..+.|+||| -+++=+
T Consensus 124 i~~~~G~Df~~--~~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 124 VTMKSGVDVFY--KPSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp EEEECSCCGGG--SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EEeeccCCccC--CCCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEE
Confidence 566667 8875 22357999999997641 11 12347899999 777743
No 392
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=67.39 E-value=2.9 Score=28.67 Aligned_cols=69 Identities=14% Similarity=0.266 Sum_probs=47.6
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchH-HHHHhhC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVP-KEILAQL 83 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~-~~l~~~L 83 (156)
++..+-+|.-+|-++...+..++.++. .|+.. +. ...|+.+.+. ...+||.|+++...+.+. -.+.+.+
T Consensus 8 ~m~k~~rILiVDD~~~~r~~l~~~L~~-~G~~~---v~-~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~i 79 (134)
T 3to5_A 8 ILNKNMKILIVDDFSTMRRIVKNLLRD-LGFNN---TQ-EADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNI 79 (134)
T ss_dssp -CCTTCCEEEECSCHHHHHHHHHHHHH-TTCCC---EE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHH
T ss_pred HhCCCCEEEEEeCCHHHHHHHHHHHHH-cCCcE---EE-EECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 344456899999999999999999998 58754 33 3445544322 235799999999888764 2344444
No 393
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=67.25 E-value=3 Score=33.11 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=25.5
Q ss_pred CCcCEEEEccCCC----chH-------------HHHHhhCCCCcEEEEEec
Q psy14971 61 GPYDIIHLGAACI----EVP-------------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 61 ~~fD~I~i~~~~~----~i~-------------~~l~~~L~pGGrLv~~~~ 94 (156)
+.||+|+++++.+ ++. +...+.|+|||.+|+-.-
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvy 255 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGY 255 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEEC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 6799999999764 211 234689999999999763
No 394
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=65.51 E-value=11 Score=28.23 Aligned_cols=59 Identities=14% Similarity=0.021 Sum_probs=43.9
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++.+.+.++. .+..+ +.++.+|..+... ..++.|.++.+++.
T Consensus 30 l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 30 FARAGANVAVAGRSTADIDACVADLDQ-LGSGK---VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV 98 (262)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHT-TSSSC---EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHh-hCCCc---EEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 444567999999999999888888876 35346 8999999875211 11478999999875
No 395
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=64.33 E-value=16 Score=23.69 Aligned_cols=74 Identities=5% Similarity=-0.046 Sum_probs=47.2
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCc--hHH-HHHh---hCCCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIE--VPK-EILA---QLKPG 86 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~--i~~-~l~~---~L~pG 86 (156)
.+|.-+|-++...+..++.++. .|+ + +. ...++.+.. ....+||+|+++...+. ... .+.+ ...+.
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~ 80 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSP-LDV-T---IQ-CFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFH 80 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTT-SSS-E---EE-EESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHH-CCc-E---EE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCC
Confidence 5899999999999999999887 464 2 43 333433222 22457999999988766 441 2222 23355
Q ss_pred cEEEEEec
Q psy14971 87 GRLVFHKG 94 (156)
Q Consensus 87 GrLv~~~~ 94 (156)
-.+++...
T Consensus 81 ~~ii~~s~ 88 (136)
T 3kto_A 81 LPTIVMAS 88 (136)
T ss_dssp CCEEEEES
T ss_pred CCEEEEEc
Confidence 55555544
No 396
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=64.12 E-value=15 Score=28.91 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=40.6
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC-CCCcCEEEEccCCC
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE-EGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~-~~~fD~I~i~~~~~ 73 (156)
|-+++-++..| ...|.++|+++...+..+.|+... . .+|..+.... ...+|.|+.+.+|.
T Consensus 22 Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~--------~---~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 22 GGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEK--------P---EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp THHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCC--------C---BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCC--------C---cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 44555455555 357999999999999988887541 2 4666543322 34699999998775
No 397
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=64.09 E-value=36 Score=25.73 Aligned_cols=79 Identities=16% Similarity=0.079 Sum_probs=50.1
Q ss_pred hcCCCCEEEEEeCCHH-HHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCCc----
Q psy14971 10 IKGERALVLILNHYMK-VKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACIE---- 74 (156)
Q Consensus 10 l~g~~g~V~avD~~~~-~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~~---- 74 (156)
+...+.+|+.++++++ ..+.+.+.++. .+ .+ +.++.+|..+... ..++.|.++.+++...
T Consensus 67 la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 141 (291)
T 3ijr_A 67 FAKEGANIAIAYLDEEGDANETKQYVEK-EG-VK---CVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQG 141 (291)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHHT-TT-CC---EEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSS
T ss_pred HHHCCCEEEEEeCCchHHHHHHHHHHHh-cC-Cc---EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCC
Confidence 4445679999998865 44555555555 24 35 8899999875210 1147899999876421
Q ss_pred h---H-------------------HHHHhhCCCCcEEEEEe
Q psy14971 75 V---P-------------------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 i---~-------------------~~l~~~L~pGGrLv~~~ 93 (156)
+ . +.+.+.++.+|++|...
T Consensus 142 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 142 LEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 1 1 12356677899988764
No 398
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=63.76 E-value=36 Score=25.28 Aligned_cols=80 Identities=19% Similarity=0.164 Sum_probs=52.5
Q ss_pred hcCCCCEEEEEeC-CHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCCch---
Q psy14971 10 IKGERALVLILNH-YMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACIEV--- 75 (156)
Q Consensus 10 l~g~~g~V~avD~-~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~~i--- 75 (156)
+...+.+|+.++. +++..+...+.++. .+ .+ +.++.+|..+... ..++.|.++.+++....
T Consensus 38 l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 112 (270)
T 3is3_A 38 LGRLGAKVVVNYANSTKDAEKVVSEIKA-LG-SD---AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHL 112 (270)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHHH-TT-CC---EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHHHh-cC-Cc---EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 4445678988775 56667777777766 35 35 8899999875211 11478999998875321
Q ss_pred ---H-------------------HHHHhhCCCCcEEEEEec
Q psy14971 76 ---P-------------------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 76 ---~-------------------~~l~~~L~pGGrLv~~~~ 94 (156)
. ..+.+.++.+|++|....
T Consensus 113 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 113 KDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp GGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 1 134567888999888654
No 399
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=63.72 E-value=36 Score=24.01 Aligned_cols=81 Identities=11% Similarity=0.053 Sum_probs=49.5
Q ss_pred chHH--HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCc----
Q psy14971 2 GDLN--VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIE---- 74 (156)
Q Consensus 2 G~la--~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~---- 74 (156)
|++. +..+++..+.+|++++++++-++ .+. . .+ ++++.+|..+... ....+|.||..++...
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~---~-~~---~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 10 GRAGSAIVAEARRRGHEVLAVVRDPQKAA----DRL---G-AT---VATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHT---C-TT---SEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred CHHHHHHHHHHHHCCCEEEEEEecccccc----ccc---C-CC---ceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 5555 23344455679999999986543 111 1 35 8899999865322 1246899999887631
Q ss_pred ------hHHHHHhhCCC-CcEEEEEe
Q psy14971 75 ------VPKEILAQLKP-GGRLVFHK 93 (156)
Q Consensus 75 ------i~~~l~~~L~p-GGrLv~~~ 93 (156)
....+.+.++. |+++|+..
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 11345665544 57777763
No 400
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=63.50 E-value=23 Score=22.53 Aligned_cols=74 Identities=12% Similarity=0.077 Sum_probs=47.3
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchHH-HH---HhhCCCCcEE
Q psy14971 16 LVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVPK-EI---LAQLKPGGRL 89 (156)
Q Consensus 16 ~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~~-~l---~~~L~pGGrL 89 (156)
+|.-+|-++...+..++.++. .|. . +.....++.+... ...+||.|+++...+.... .+ .+...|.-.+
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~-~g~-~---v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~i 77 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIK-NDI-E---ILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGII 77 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHH-TTE-E---EEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEE
T ss_pred EEEEEcCCHHHHHHHHHHHhh-CCc-E---EEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeE
Confidence 688899999999999999988 353 2 3324455544322 1357999999988765431 22 2334566666
Q ss_pred EEEec
Q psy14971 90 VFHKG 94 (156)
Q Consensus 90 v~~~~ 94 (156)
++...
T Consensus 78 i~~s~ 82 (134)
T 3f6c_A 78 IIVSA 82 (134)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66554
No 401
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=63.17 E-value=34 Score=23.63 Aligned_cols=72 Identities=21% Similarity=0.085 Sum_probs=47.9
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHHhhCC---CCcEEEE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEILAQLK---PGGRLVF 91 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~~~L~---pGGrLv~ 91 (156)
.+|.-+|-++...+..+..+.. .|+. +. ...+..+.. ...||+|+++...+.....+.+.++ +.-.+++
T Consensus 13 ~~iLivdd~~~~~~~l~~~L~~-~g~~----v~-~~~~~~~al--~~~~dlvl~D~~mp~~~g~l~~~~~~~~~~~~ii~ 84 (196)
T 1qo0_D 13 LQVLVLNPPGEVSDALVLQLIR-IGCS----VR-QCWPPPEAF--DVPVDVVFTSIFQNRHHDEIAALLAAGTPRTTLVA 84 (196)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH-HTCE----EE-EECSCCSSC--SSCCSEEEEECCSSTHHHHHHHHHHHSCTTCEEEE
T ss_pred CeEEEEcCChhHHHHHHHHHHH-cCCe----EE-EecCchhhC--CCCCCEEEEeCCCCccchHHHHHHhccCCCCCEEE
Confidence 5899999999999999999987 4652 33 333444433 3479999999988765433444333 5555555
Q ss_pred Eec
Q psy14971 92 HKG 94 (156)
Q Consensus 92 ~~~ 94 (156)
..+
T Consensus 85 lt~ 87 (196)
T 1qo0_D 85 LVE 87 (196)
T ss_dssp EEC
T ss_pred EEc
Confidence 544
No 402
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=62.33 E-value=10 Score=29.04 Aligned_cols=59 Identities=14% Similarity=-0.017 Sum_probs=43.7
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
++..+.+|+.++++++.++.+.+.++. .+..+ +.++.+|..+... ..++.|.++.+++.
T Consensus 61 la~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 61 FARAGANVAVAARSPRELSSVTAELGE-LGAGN---VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129 (293)
T ss_dssp HHHTTCEEEEEESSGGGGHHHHHHHTT-SSSSC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHCCCEEEEEECCHHHHHHHHHHHHh-hCCCc---EEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 444567999999999988888888776 35446 8999999875210 12578999999875
No 403
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=62.00 E-value=29 Score=24.38 Aligned_cols=80 Identities=11% Similarity=0.026 Sum_probs=48.9
Q ss_pred chHH--HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-CCCCcCEEEEccCCCch---
Q psy14971 2 GDLN--VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-EEGPYDIIHLGAACIEV--- 75 (156)
Q Consensus 2 G~la--~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-~~~~fD~I~i~~~~~~i--- 75 (156)
|++. +..+++..+.+|++++++++.++ . +. .+ ++++.+|..+... ....+|.||..++...-
T Consensus 10 G~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~-~~-~~---~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 10 GRAGSRILEEAKNRGHEVTAIVRNAGKIT-------Q-TH-KD---INILQKDIFDLTLSDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESCSHHHH-------H-HC-SS---SEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTT
T ss_pred chhHHHHHHHHHhCCCEEEEEEcCchhhh-------h-cc-CC---CeEEeccccChhhhhhcCCCEEEECCcCCccccc
Confidence 5555 23344445579999999976432 2 12 35 8899999865322 12468999998876421
Q ss_pred -----HHHHHhhCCC--CcEEEEEe
Q psy14971 76 -----PKEILAQLKP--GGRLVFHK 93 (156)
Q Consensus 76 -----~~~l~~~L~p--GGrLv~~~ 93 (156)
...+.+.++. .+++|+..
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEe
Confidence 1345555544 46777754
No 404
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=61.51 E-value=32 Score=25.73 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=49.7
Q ss_pred hcCCCCEEEEEeCCHH-HHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCCch---
Q psy14971 10 IKGERALVLILNHYMK-VKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACIEV--- 75 (156)
Q Consensus 10 l~g~~g~V~avD~~~~-~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~~i--- 75 (156)
+...+.+|+.++++++ ..+.+.+.++. .+ .+ +.++.+|..+... ..+..|.++.+++....
T Consensus 49 l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~ 123 (283)
T 1g0o_A 49 LGRRGCKVIVNYANSTESAEEVVAAIKK-NG-SD---AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHV 123 (283)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred HHHCCCEEEEEeCCchHHHHHHHHHHHH-hC-CC---eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 4445679999998864 34555555655 34 35 8889999764210 01478999999875321
Q ss_pred ----H------------------HHHHhhCCCCcEEEEEe
Q psy14971 76 ----P------------------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 76 ----~------------------~~l~~~L~pGGrLv~~~ 93 (156)
+ +.+.+.|+.+|++|...
T Consensus 124 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 124 KDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp GGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 1 12355667789988864
No 405
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=60.66 E-value=35 Score=24.68 Aligned_cols=59 Identities=15% Similarity=0.064 Sum_probs=42.9
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC------------CCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE------------EGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~------------~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++...+.++. .+..+ +.++..|......+ .++.|.++.+++.
T Consensus 34 l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~---~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 34 YAAHGASVVLLGRTEASLAEVSDQIKS-AGQPQ---PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASI 104 (247)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TTSCC---CEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHCCCEEEEEecCHHHHHHHHHHHHh-cCCCC---ceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 444567999999999999988888877 35455 78888887321111 1478999999875
No 406
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=60.10 E-value=1.4 Score=34.62 Aligned_cols=75 Identities=11% Similarity=-0.063 Sum_probs=41.7
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC----chH--------HHHH
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI----EVP--------KEIL 80 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~----~i~--------~~l~ 80 (156)
+...|+++|+..++...+... +. ++. + +.....+.........++|.|+++++.. .+. +...
T Consensus 113 gv~sV~GvdvG~d~~~~pi~~-~~-~g~-~---ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~ 186 (282)
T 3gcz_A 113 NVKKVMAFTLGVQGHEKPIMR-TT-LGW-N---LIRFKDKTDVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAK 186 (282)
T ss_dssp TEEEEEEECCCCTTSCCCCCC-CB-TTG-G---GEEEECSCCGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCeeeeEEeccCcccccccc-cc-CCC-c---eEEeeCCcchhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHH
Confidence 346789999976643333210 11 132 3 3333322211112246899999999876 111 1225
Q ss_pred hhCCCC--cEEEEEe
Q psy14971 81 AQLKPG--GRLVFHK 93 (156)
Q Consensus 81 ~~L~pG--GrLv~~~ 93 (156)
+.|+|| |.+|+=+
T Consensus 187 ~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 187 QWLQEGNYTEFCIKV 201 (282)
T ss_dssp HHHHHHCCCEEEEEE
T ss_pred HHcCCCCCCcEEEEE
Confidence 789999 9999855
No 407
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=60.05 E-value=35 Score=24.72 Aligned_cols=60 Identities=20% Similarity=0.020 Sum_probs=44.1
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----------CCCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----------AEEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----------~~~~~fD~I~i~~~~~ 73 (156)
++...+.+|+.++++++..+...+.++. .+ .+ +.++.+|..+.. ...++.|.++.+++..
T Consensus 24 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 24 ALASKGATVVGTATSQASAEKFENSMKE-KG-FK---ARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3444567999999999998888888876 35 35 899999986521 1124789999998764
No 408
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=59.33 E-value=12 Score=24.85 Aligned_cols=79 Identities=10% Similarity=0.053 Sum_probs=48.8
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchHH-HH---HhhCCCC
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVPK-EI---LAQLKPG 86 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~~-~l---~~~L~pG 86 (156)
...+|.-+|-++...+..++.++.. +... +.....++.+... ...+||+|+++...+.... .+ .+...|.
T Consensus 14 ~~~~iLivdd~~~~~~~l~~~L~~~-~~~~---~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~ 89 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVVRALSLS-GSVN---VVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELP 89 (152)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHH-SSEE---EEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCS
T ss_pred ceEEEEEEcCCHHHHHHHHHHHhhC-CCeE---EEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCC
Confidence 3568999999999999999999883 5322 2223444433221 1356999999988765431 22 2233566
Q ss_pred cEEEEEecc
Q psy14971 87 GRLVFHKGL 95 (156)
Q Consensus 87 GrLv~~~~~ 95 (156)
-.+++....
T Consensus 90 ~~ii~~s~~ 98 (152)
T 3eul_A 90 TRVLLISAH 98 (152)
T ss_dssp CEEEEEESC
T ss_pred CeEEEEEcc
Confidence 666665543
No 409
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=59.15 E-value=36 Score=25.74 Aligned_cols=79 Identities=18% Similarity=0.062 Sum_probs=50.8
Q ss_pred hcCCCCEEEEEeCC--HHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCCc---
Q psy14971 10 IKGERALVLILNHY--MKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACIE--- 74 (156)
Q Consensus 10 l~g~~g~V~avD~~--~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~~--- 74 (156)
+...+.+|+.++++ ++..+...+.++. .+ .+ +.++.+|..+... ..+..|.++.+++...
T Consensus 69 la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 143 (294)
T 3r3s_A 69 YAREGADVAINYLPAEEEDAQQVKALIEE-CG-RK---AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIP 143 (294)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHH-TT-CC---EEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCS
T ss_pred HHHCCCEEEEEeCCcchhHHHHHHHHHHH-cC-Cc---EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCC
Confidence 44456789999987 3455555555655 34 35 8889999865210 0157899999987531
Q ss_pred -h---H-------------------HHHHhhCCCCcEEEEEe
Q psy14971 75 -V---P-------------------KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 75 -i---~-------------------~~l~~~L~pGGrLv~~~ 93 (156)
+ . +.+.+.++.+|++|...
T Consensus 144 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 144 EIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp SGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 1 1 12356778899988864
No 410
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=58.87 E-value=23 Score=25.69 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=41.9
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--C--------CCCcCEEEEccCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--E--------EGPYDIIHLGAAC 72 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~--------~~~fD~I~i~~~~ 72 (156)
+++..+.+|+.++++++..+...+.++. .+ .+ +.++.+|..+... . .++.|.++.+++.
T Consensus 30 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 30 TFATAGASVVVSDINADAANHVVDEIQQ-LG-GQ---AFACRCDITSEQELSALADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHTTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHCCCEEEEEcCCHHHHHHHHHHHHH-hC-Cc---eEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4555567999999999887777777765 34 35 8889999865210 0 1378999998875
No 411
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=58.55 E-value=20 Score=23.11 Aligned_cols=77 Identities=14% Similarity=0.046 Sum_probs=47.5
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CC-----CCCcCEEEEccCCCchH-HHHHhhCC
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AE-----EGPYDIIHLGAACIEVP-KEILAQLK 84 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~-----~~~fD~I~i~~~~~~i~-~~l~~~L~ 84 (156)
.-+|.-+|-++...+..++.++. .|.... +. ...++.+.. .. ..+||+|+++...+... -.+.+.|+
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~-~g~~~~--v~-~~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~ 82 (143)
T 2qvg_A 7 KVDILYLEDDEVDIQSVERVFHK-ISSLIK--IE-IAKSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELR 82 (143)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHH-HCTTCC--EE-EESSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHT
T ss_pred CCeEEEEeCCHHHHHHHHHHHHH-hCCCce--EE-EECCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHH
Confidence 35799999999999999999988 475321 33 233332211 11 25799999998876543 23444444
Q ss_pred -----CCcEEEEEec
Q psy14971 85 -----PGGRLVFHKG 94 (156)
Q Consensus 85 -----pGGrLv~~~~ 94 (156)
+.-.+++...
T Consensus 83 ~~~~~~~~~ii~ls~ 97 (143)
T 2qvg_A 83 DDSSFTDIEVFVLTA 97 (143)
T ss_dssp TSGGGTTCEEEEEES
T ss_pred cCccccCCcEEEEeC
Confidence 3445555443
No 412
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=58.51 E-value=23 Score=26.45 Aligned_cols=59 Identities=17% Similarity=-0.035 Sum_probs=42.0
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CC-CCcCEEEEccCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EE-GPYDIIHLGAAC 72 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~-~~fD~I~i~~~~ 72 (156)
++...+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... .. +..|.++.+++.
T Consensus 40 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 40 ELAGLGARVYTCSRNEKELDECLEIWRE-KG-LN---VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---eEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCC
Confidence 3444567999999999888777777765 34 35 8889999865210 01 678999999875
No 413
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=58.31 E-value=19 Score=27.39 Aligned_cols=59 Identities=14% Similarity=-0.000 Sum_probs=44.8
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----------CCCCCcCEEEEccCCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----------AEEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----------~~~~~fD~I~i~~~~~ 73 (156)
+...+++|+..|++++.++.+.+.++. .|. + +..+.+|..+.. ...++.|.++.+++..
T Consensus 29 la~~Ga~Vvi~~~~~~~~~~~~~~l~~-~g~-~---~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 29 LAAAGARVILNDIRATLLAESVDTLTR-KGY-D---AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQ 97 (255)
T ss_dssp HHHTTCEEEECCSCHHHHHHHHHHHHH-TTC-C---EEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCC
T ss_pred HHHCCCEEEEEECCHHHHHHHHHHHHh-cCC-c---EEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCC
Confidence 445568999999999999988888877 353 5 888889986521 1236789999998753
No 414
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.28 E-value=14 Score=25.78 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=43.2
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--CC---CCCCcCEEEEccCCCchHH---HHHhhCCC
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--HA---EEGPYDIIHLGAACIEVPK---EILAQLKP 85 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--~~---~~~~fD~I~i~~~~~~i~~---~l~~~L~p 85 (156)
+..|+.+|.+++.++.++ . .| +.++.||..+. +. ....+|.|++..+-..... ...+.+.|
T Consensus 63 g~~V~vid~~~~~~~~~~----~-~g------~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~ 131 (183)
T 3c85_A 63 GKISLGIEIREEAAQQHR----S-EG------RNVISGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNY 131 (183)
T ss_dssp CSCEEEEESCHHHHHHHH----H-TT------CCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred CCeEEEEECCHHHHHHHH----H-CC------CCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCC
Confidence 468999999998776544 3 23 44677887541 11 1346899998665433222 23456677
Q ss_pred CcEEEEEec
Q psy14971 86 GGRLVFHKG 94 (156)
Q Consensus 86 GGrLv~~~~ 94 (156)
.+++++...
T Consensus 132 ~~~ii~~~~ 140 (183)
T 3c85_A 132 KGQIAAIAE 140 (183)
T ss_dssp CSEEEEEES
T ss_pred CCEEEEEEC
Confidence 778777543
No 415
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=58.16 E-value=50 Score=23.87 Aligned_cols=82 Identities=6% Similarity=-0.070 Sum_probs=50.8
Q ss_pred chHH-HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----CCCCCcCEEEEccCCCchH
Q psy14971 2 GDLN-VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----AEEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 2 G~la-~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----~~~~~fD~I~i~~~~~~i~ 76 (156)
|.++ .+++.+...+.|+.+|.+++.++.++ . + +.++.||+.+.. ......|.+++..+-....
T Consensus 18 G~~G~~la~~L~~~g~v~vid~~~~~~~~~~----~-----~---~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 85 (234)
T 2aef_A 18 SESTLECLRELRGSEVFVLAEDENVRKKVLR----S-----G---ANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 85 (234)
T ss_dssp CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH----T-----T---CEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH
T ss_pred ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh----c-----C---CeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH
Confidence 4444 34555544334999999998775544 2 3 678899986421 1134689999876554322
Q ss_pred ---HHHHhhCCCCcEEEEEecc
Q psy14971 77 ---KEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~~~~~ 95 (156)
....+.+.|+.++++-+..
T Consensus 86 ~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 86 IHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp HHHHHHHHHHCSSSEEEEECSS
T ss_pred HHHHHHHHHHCCCCeEEEEECC
Confidence 2345667787788886643
No 416
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=58.07 E-value=14 Score=24.52 Aligned_cols=75 Identities=11% Similarity=0.132 Sum_probs=45.9
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH-HHHHhh---CCCCc
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP-KEILAQ---LKPGG 87 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~-~~l~~~---L~pGG 87 (156)
..+|.-+|-++...+..++.++. .|+ + +. ...++.+.. ....+||+|+++...+... ..+.+. ..+.-
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~ 76 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLEL-AGF-T---VS-SFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDL 76 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHH-cCc-E---EE-EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCC
Confidence 46899999999999999999987 464 2 43 333332211 1235699999998876533 122222 24555
Q ss_pred EEEEEec
Q psy14971 88 RLVFHKG 94 (156)
Q Consensus 88 rLv~~~~ 94 (156)
.+++...
T Consensus 77 pii~ls~ 83 (155)
T 1qkk_A 77 PMILVTG 83 (155)
T ss_dssp CEEEEEC
T ss_pred CEEEEEC
Confidence 5555544
No 417
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=57.22 E-value=27 Score=22.60 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=47.1
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH-HHHHhhCC-----CC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP-KEILAQLK-----PG 86 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~-~~l~~~L~-----pG 86 (156)
.+|.-+|-++...+..++.++. .|... ......++.+.. ....+||+|+++...+... -.+.+.|+ ++
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~-~~~~~---~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~ 81 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDR-KDIHC---QLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQH 81 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHH-TTCCE---EEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTT
T ss_pred CEEEEEeCCHHHHHHHHHHHHh-cCCCe---eEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccC
Confidence 5899999999999999999988 46532 223333433221 1235799999998876543 23333333 44
Q ss_pred cEEEEEec
Q psy14971 87 GRLVFHKG 94 (156)
Q Consensus 87 GrLv~~~~ 94 (156)
-.+++...
T Consensus 82 ~pii~~s~ 89 (144)
T 3kht_A 82 TPIVILTD 89 (144)
T ss_dssp CCEEEEET
T ss_pred CCEEEEeC
Confidence 44555444
No 418
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=57.10 E-value=24 Score=29.65 Aligned_cols=63 Identities=14% Similarity=-0.008 Sum_probs=42.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchH-HHHHhhCCCCcEEEEEe
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVP-KEILAQLKPGGRLVFHK 93 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~-~~l~~~L~pGGrLv~~~ 93 (156)
.+|+++|+++..++.|+ . +|. .+. +..+. ....|+|+...+...+. ...++.+|+||+++..-
T Consensus 298 a~Viv~d~~~~~~~~A~----~-~Ga------~~~--~l~e~---l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 298 ARVSVTEIDPINALQAM----M-EGF------DVV--TVEEA---IGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp CEEEEECSCHHHHHHHH----H-TTC------EEC--CHHHH---GGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECS
T ss_pred CEEEEEeCCHHHHHHHH----H-cCC------EEe--cHHHH---HhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeC
Confidence 69999999998776654 2 243 211 11111 13479999987766643 46788999999997743
No 419
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=57.02 E-value=19 Score=36.28 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=49.2
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccC--CC---CCCCCCCcCEEEEccCCCchHHHHHh
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDG--SK---GHAEEGPYDIIHLGAACIEVPKEILA 81 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~--~~---~~~~~~~fD~I~i~~~~~~i~~~l~~ 81 (156)
+|+..| ++|++++.+++..+.+++++.. +|.+. + +-..+. .+ .......+|+|+-..+ ....+..++
T Consensus 1687 lAk~~G--a~Viat~~s~~k~~~l~~~~~~-lga~~---v-~~~~~~~~~~~i~~~t~g~GvDvVld~~g-~~~l~~~l~ 1758 (2512)
T 2vz8_A 1687 IALSRG--CRVFTTVGSAEKRAYLQARFPQ-LDETC---F-ANSRDTSFEQHVLRHTAGKGVDLVLNSLA-EEKLQASVR 1758 (2512)
T ss_dssp HHHHTT--CEEEEEESCHHHHHHHHHHCTT-CCSTT---E-EESSSSHHHHHHHHTTTSCCEEEEEECCC-HHHHHHHHT
T ss_pred HHHHcC--CEEEEEeCChhhhHHHHhhcCC-CCceE---E-ecCCCHHHHHHHHHhcCCCCceEEEECCC-chHHHHHHH
Confidence 456665 6999999999998888876543 35433 2 111111 00 0111245999987654 344556788
Q ss_pred hCCCCcEEEEE
Q psy14971 82 QLKPGGRLVFH 92 (156)
Q Consensus 82 ~L~pGGrLv~~ 92 (156)
.|++||++|..
T Consensus 1759 ~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1759 CLAQHGRFLEI 1769 (2512)
T ss_dssp TEEEEEEEEEC
T ss_pred hcCCCcEEEEe
Confidence 99999999875
No 420
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=56.61 E-value=12 Score=29.20 Aligned_cols=33 Identities=0% Similarity=-0.166 Sum_probs=27.4
Q ss_pred chHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhh
Q psy14971 2 GDLNVIVGIKGERALVLILNHYMKVKSKNQNNKKL 36 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~~~~~~A~~~l~~ 36 (156)
|-.++.|..+| .+.+++|+++...+.|++++++
T Consensus 264 Gtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 264 NTTGLVAERES--RKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSC
T ss_pred CHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHh
Confidence 44555666665 7999999999999999999987
No 421
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=56.05 E-value=21 Score=22.70 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=38.6
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CC------CCCcCEEEEccCCCch
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AE------EGPYDIIHLGAACIEV 75 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~------~~~fD~I~i~~~~~~i 75 (156)
..+|.-+|-++...+..++.++. .|.... +. ...++.+.. .. ..+||+|+++...+..
T Consensus 2 ~~~ilivdd~~~~~~~l~~~L~~-~~~~~~--v~-~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~ 68 (140)
T 1k68_A 2 HKKIFLVEDNKADIRLIQEALAN-STVPHE--VV-TVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKK 68 (140)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHT-CSSCCE--EE-EECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSS
T ss_pred CCeEEEEeCCHHHHHHHHHHHHh-cCCCce--EE-EECCHHHHHHHHHcccccccCCCCcEEEEecCCCcc
Confidence 35899999999999999999988 465320 22 233332211 11 1579999999887654
No 422
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=56.03 E-value=60 Score=24.17 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=52.2
Q ss_pred HhcCCCCEEEEEeCC-HHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCCc---
Q psy14971 9 GIKGERALVLILNHY-MKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACIE--- 74 (156)
Q Consensus 9 ~l~g~~g~V~avD~~-~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~~--- 74 (156)
++...+.+|+.++.+ ++..+...+.++. .+ .+ +.++.+|..+... ..++.|.++.+++...
T Consensus 50 ~la~~G~~V~~~~~~~~~~~~~~~~~l~~-~~-~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 124 (271)
T 3v2g_A 50 RLALEGAAVALTYVNAAERAQAVVSEIEQ-AG-GR---AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP 124 (271)
T ss_dssp HHHHTTCEEEEEESSCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cC-Cc---EEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC
Confidence 344456789888654 5666666666666 35 35 8899999865210 1147899999987531
Q ss_pred ---hH-------------------HHHHhhCCCCcEEEEEec
Q psy14971 75 ---VP-------------------KEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 75 ---i~-------------------~~l~~~L~pGGrLv~~~~ 94 (156)
.+ ..+.+.++.+|++|....
T Consensus 125 ~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 125 LEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 11 133567788999888643
No 423
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=55.94 E-value=28 Score=25.89 Aligned_cols=60 Identities=10% Similarity=0.025 Sum_probs=43.2
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
+...+.+|+.++++++.++.+.+.+....+ .+ +.++.+|..+... ..++.|.++.+++..
T Consensus 40 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 40 FAAAGARLVLSGRDVSELDAARRALGEQFG-TD---VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CC---EEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-Cc---EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 444567999999999988888777755113 35 8999999876321 014789999998753
No 424
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=55.91 E-value=33 Score=22.44 Aligned_cols=57 Identities=11% Similarity=0.162 Sum_probs=39.3
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-----------CCCCcCEEEEccCCCch
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-----------EEGPYDIIHLGAACIEV 75 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-----------~~~~fD~I~i~~~~~~i 75 (156)
-+|.-+|-++...+..++.++. .|.... +. ...++.+... ...+||+|+++...+..
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~-~g~~~~--v~-~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~ 72 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRR-AGVNNE--II-AFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDM 72 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHH-TTCCCC--EE-EESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSS
T ss_pred ceEEEEeCCHHHHHHHHHHHHh-CCCcce--EE-EeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCC
Confidence 5899999999999999999988 475321 33 2333322111 24679999999887754
No 425
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=55.88 E-value=23 Score=26.18 Aligned_cols=59 Identities=17% Similarity=0.020 Sum_probs=41.7
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CC-CCcCEEEEccCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EE-GPYDIIHLGAAC 72 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~-~~fD~I~i~~~~ 72 (156)
+++..+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... .. +..|.++.+++.
T Consensus 28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 28 ELASLGASVYTCSRNQKELNDCLTQWRS-KG-FK---VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CE---EEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---EEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCC
Confidence 3444567999999999888777777665 24 24 8889999865210 01 579999999875
No 426
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=55.68 E-value=4.6 Score=34.78 Aligned_cols=48 Identities=15% Similarity=0.143 Sum_probs=34.2
Q ss_pred eEEEEccCCCCCCC-----CCCcCEEEEccCCCc---------hHHHHHhhCCCCcEEEEEe
Q psy14971 46 KNVSVKDGSKGHAE-----EGPYDIIHLGAACIE---------VPKEILAQLKPGGRLVFHK 93 (156)
Q Consensus 46 v~~~~gD~~~~~~~-----~~~fD~I~i~~~~~~---------i~~~l~~~L~pGGrLv~~~ 93 (156)
+++..||+.+.++. ...||+||+++=.+. +...+.+.++|||.+....
T Consensus 158 l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 158 LDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 56788888664443 367999999985432 2346778899999988754
No 427
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=55.50 E-value=33 Score=25.17 Aligned_cols=59 Identities=10% Similarity=-0.019 Sum_probs=42.0
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccC--CCCC----------CCCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDG--SKGH----------AEEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~--~~~~----------~~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++.+.+.+... +..+ +.++..|. .+.. ...++.|.++.+++.
T Consensus 32 l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 32 YARYGATVILLGRNEEKLRQVASHINEE-TGRQ---PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHHH-HSCC---CEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHhh-cCCC---ceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 4445689999999999888887777652 4335 88889997 3210 012478999999875
No 428
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=55.13 E-value=29 Score=25.40 Aligned_cols=58 Identities=17% Similarity=0.097 Sum_probs=41.7
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..+..|.++.+++.
T Consensus 27 l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 27 LAAEGAAVAIAARRVEKLRALGDELTA-AG-AK---VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHCCCEEEEEECCHHHHHHHHHHHHh-cC-Cc---EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 444567999999999888877777765 34 35 8889999865211 01478999998875
No 429
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=55.12 E-value=58 Score=23.90 Aligned_cols=59 Identities=5% Similarity=-0.081 Sum_probs=39.8
Q ss_pred chHH--HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCC
Q psy14971 2 GDLN--VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la--~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~ 73 (156)
|++. +...++..+.+|++++++++-.+. +.. .+ ++++.+|..+. . ...+|.||..++..
T Consensus 14 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~----~~---~~~~~~D~~d~-~-~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 14 GYTARVLSRALAPQGWRIIGTSRNPDQMEA----IRA----SG---AEPLLWPGEEP-S-LDGVTHLLISTAPD 74 (286)
T ss_dssp CHHHHHHHHHHGGGTCEEEEEESCGGGHHH----HHH----TT---EEEEESSSSCC-C-CTTCCEEEECCCCB
T ss_pred cHHHHHHHHHHHHCCCEEEEEEcChhhhhh----Hhh----CC---CeEEEeccccc-c-cCCCCEEEECCCcc
Confidence 5555 233455556799999999864422 222 24 88999998763 3 56789999988764
No 430
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=55.10 E-value=32 Score=25.40 Aligned_cols=62 Identities=11% Similarity=0.066 Sum_probs=40.3
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
+++..+.+|+.++++++..+.+.+.+.....-.+ +.++.+|..+... ..++.|.++.+++..
T Consensus 26 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 26 ALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQK---TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN 97 (267)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGG---EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCc---eEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3444567999999998877666665543111124 8889999865210 014689999998753
No 431
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=54.67 E-value=17 Score=23.06 Aligned_cols=75 Identities=11% Similarity=0.005 Sum_probs=44.0
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH-HHHH---hhCCCCc
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP-KEIL---AQLKPGG 87 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~-~~l~---~~L~pGG 87 (156)
..+|.-+|-++...+..++.++. .|. . +. ...++.+.. ....+||.|+++...+... -.+. +...+.-
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 80 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSS-LGA-T---TV-LAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQT 80 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHh-CCc-e---EE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCC
Confidence 46899999999999999998988 464 2 33 233433322 1235699999998766432 1222 2234455
Q ss_pred EEEEEec
Q psy14971 88 RLVFHKG 94 (156)
Q Consensus 88 rLv~~~~ 94 (156)
.+++...
T Consensus 81 ~ii~~t~ 87 (130)
T 3eod_A 81 PVLVISA 87 (130)
T ss_dssp CEEEEEC
T ss_pred CEEEEEc
Confidence 5555444
No 432
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=54.10 E-value=8.9 Score=29.72 Aligned_cols=76 Identities=13% Similarity=-0.049 Sum_probs=46.5
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEc-cCCCCCCCCCCcCEEEEccCCCc-hH--------
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVK-DGSKGHAEEGPYDIIHLGAACIE-VP-------- 76 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~g-D~~~~~~~~~~fD~I~i~~~~~~-i~-------- 76 (156)
.+...+. .+|+|+|+-..-.+.-+ ..+. +|.+. |+|+.+ |.....+ .++|.|+++.+.+. .|
T Consensus 96 ~a~~~g~-~~V~avdvG~~ghe~P~-~~~s-~gwn~---v~fk~gvDv~~~~~--~~~DtllcDIgeSs~~~~vE~~Rtl 167 (267)
T 3p8z_A 96 CAGLKKV-TEVRGYTKGGPGHEEPV-PMST-YGWNI---VKLMSGKDVFYLPP--EKCDTLLCDIGESSPSPTVEESRTI 167 (267)
T ss_dssp HHTSTTE-EEEEEECCCSTTSCCCC-CCCC-TTTTS---EEEECSCCGGGCCC--CCCSEEEECCCCCCSCHHHHHHHHH
T ss_pred HHHhcCC-CEEEEEecCCCCccCcc-hhhh-cCcCc---eEEEeccceeecCC--ccccEEEEecCCCCCChhhhhhHHH
Confidence 4444444 58999998765331111 1134 57777 999999 8643222 67999999987642 11
Q ss_pred ---HHHHhhCCCCcEEEE
Q psy14971 77 ---KEILAQLKPGGRLVF 91 (156)
Q Consensus 77 ---~~l~~~L~pGGrLv~ 91 (156)
+-+.+.|++ |-+++
T Consensus 168 rvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 168 RVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp HHHHHHGGGCSS-CEEEE
T ss_pred HHHHHHHHhccc-CCEEE
Confidence 112466888 56655
No 433
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=54.04 E-value=38 Score=25.61 Aligned_cols=58 Identities=10% Similarity=-0.002 Sum_probs=44.5
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----------CCCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----------AEEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----------~~~~~fD~I~i~~~~ 72 (156)
+...+++|+.+|++++.++.+.+.++. .|. + +.++.+|..+.. ...++.|.++.+++.
T Consensus 27 la~~Ga~Vv~~~~~~~~~~~~~~~i~~-~g~-~---~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 27 FALNDSIVVAVELLEDRLNQIVQELRG-MGK-E---VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TTC-C---EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHcCCEEEEEECCHHHHHHHHHHHHh-cCC-c---EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 344568999999999999999988887 463 5 889999987521 112678999999874
No 434
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=54.01 E-value=24 Score=25.77 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=41.5
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--C--------CCCcCEEEEccCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--E--------EGPYDIIHLGAAC 72 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~--------~~~fD~I~i~~~~ 72 (156)
+++..+.+|+.++++++..+...+.++. .+ .+ +.++.+|..+... . .++.|.++.+++.
T Consensus 32 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 32 ALAEAGARVIIADLDEAMATKAVEDLRM-EG-HD---VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3444567999999999887777677765 24 35 8999999875211 0 1478999998864
No 435
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=53.87 E-value=22 Score=22.97 Aligned_cols=67 Identities=13% Similarity=0.046 Sum_probs=42.6
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CC-------C--CCcCEEEEccCCCchH-HHHH
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AE-------E--GPYDIIHLGAACIEVP-KEIL 80 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~-------~--~~fD~I~i~~~~~~i~-~~l~ 80 (156)
..+|.-+|-++...+..++.++. .|.... +. ...++.+.. .. . .+||+|+++...+... -.+.
T Consensus 6 ~~~iLivdd~~~~~~~l~~~L~~-~g~~~~--v~-~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~ 81 (149)
T 1k66_A 6 TQPLLVVEDSDEDFSTFQRLLQR-EGVVNP--IY-RCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVL 81 (149)
T ss_dssp TSCEEEECCCHHHHHHHHHHHHH-TTBCSC--EE-EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHH-cCCCce--EE-EECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHH
Confidence 46899999999999999999988 465311 33 233332211 11 1 5799999998877543 2344
Q ss_pred hhCC
Q psy14971 81 AQLK 84 (156)
Q Consensus 81 ~~L~ 84 (156)
+.|+
T Consensus 82 ~~l~ 85 (149)
T 1k66_A 82 QEIK 85 (149)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 4444
No 436
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=53.25 E-value=39 Score=24.96 Aligned_cols=59 Identities=10% Similarity=0.014 Sum_probs=40.7
Q ss_pred hcCCCCEEEEEeC-CHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC----CC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNH-YMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG----HA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~-~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~----~~----------~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.+++ +++.++...+.++...+ .+ +.++.+|..+. .. ..+..|.++.+++.
T Consensus 31 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~---~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 31 LHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GS---AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TC---EEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-Cc---eEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444679999999 88887777666654113 35 88999998753 10 01368999999874
No 437
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=53.23 E-value=32 Score=25.61 Aligned_cols=60 Identities=12% Similarity=-0.129 Sum_probs=41.5
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
++..+.+|+.++++++.++...+.++. .+...+ +.++.+|..+... ..+++|.++.+++.
T Consensus 52 l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 52 LVQQGLKVVGCARTVGNIEELAAECKS-AGYPGT--LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TTCSSE--EEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHCCCEEEEEECChHHHHHHHHHHHh-cCCCce--EEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 344457999999999888777777766 354222 7888999865211 01378999998874
No 438
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.03 E-value=31 Score=22.76 Aligned_cols=71 Identities=7% Similarity=-0.006 Sum_probs=43.0
Q ss_pred CCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--C--CCCCcCEEEEccCCCchHH---HHHhhCC
Q psy14971 12 GERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--A--EEGPYDIIHLGAACIEVPK---EILAQLK 84 (156)
Q Consensus 12 g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~--~~~~fD~I~i~~~~~~i~~---~l~~~L~ 84 (156)
..+..|+.+|.+++.++.+++ . + +.++.||..+.. . .....|.|++..+-..... ...+.+.
T Consensus 27 ~~g~~V~~id~~~~~~~~~~~---~--~------~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 27 AAGKKVLAVDKSKEKIELLED---E--G------FDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVS 95 (141)
T ss_dssp HTTCCEEEEESCHHHHHHHHH---T--T------CEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHC
T ss_pred HCCCeEEEEECCHHHHHHHHH---C--C------CcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhC
Confidence 345689999999987765542 1 2 567889986521 1 1246899998776332222 2234455
Q ss_pred CCcEEEEEec
Q psy14971 85 PGGRLVFHKG 94 (156)
Q Consensus 85 pGGrLv~~~~ 94 (156)
..++++-..
T Consensus 96 -~~~iia~~~ 104 (141)
T 3llv_A 96 -DVYAIVRVS 104 (141)
T ss_dssp -CCCEEEEES
T ss_pred -CceEEEEEc
Confidence 556666544
No 439
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=53.02 E-value=42 Score=24.89 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=41.9
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
++..+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..+++|.++.+++.
T Consensus 51 L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 51 FAKLKSKLVLWDINKHGLEETAAKCKG-LG-AK---VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCC
T ss_pred HHHCCCEEEEEEcCHHHHHHHHHHHHh-cC-Ce---EEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCc
Confidence 444467999999999888777777766 34 35 8999999865210 12478999999875
No 440
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=52.96 E-value=40 Score=21.21 Aligned_cols=73 Identities=16% Similarity=0.112 Sum_probs=44.9
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC--CCCCCCCcCEEEEccCCCchHH-HHH---hhCCCCcE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK--GHAEEGPYDIIHLGAACIEVPK-EIL---AQLKPGGR 88 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~--~~~~~~~fD~I~i~~~~~~i~~-~l~---~~L~pGGr 88 (156)
-+|.-+|-++...+..++.++. .+. . +... .+..+ ...... ||+|+++...+.... .+. +...+.-.
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~-~~~-~---v~~~-~~~~~~~~~~~~~-~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ 76 (135)
T 3eqz_A 4 NRVFIVDDDTLTCNLLKTIVEP-IFG-N---VEAF-QHPRAFLTLSLNK-QDIIILDLMMPDMDGIEVIRHLAEHKSPAS 76 (135)
T ss_dssp CEEEEECSCHHHHHHHHHHHTT-TCS-C---EEEE-SCHHHHTTSCCCT-TEEEEEECCTTTTHHHHHHHHHHHTTCCCE
T ss_pred ceEEEEeCCHHHHHHHHHHHHh-hcc-e---eeee-cCHHHHHHhhccC-CCEEEEeCCCCCCCHHHHHHHHHhCCCCCC
Confidence 5899999999999999988887 332 3 3322 22221 122234 999999998876442 222 23345556
Q ss_pred EEEEec
Q psy14971 89 LVFHKG 94 (156)
Q Consensus 89 Lv~~~~ 94 (156)
+++...
T Consensus 77 ii~~s~ 82 (135)
T 3eqz_A 77 LILISG 82 (135)
T ss_dssp EEEEES
T ss_pred EEEEEe
Confidence 665544
No 441
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=52.90 E-value=9.9 Score=25.44 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=39.4
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCch
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEV 75 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i 75 (156)
..+|.-+|-++...+..++.++. .|+ + +. ...++.+.. ....+||+|+++...+..
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~al~~l~~~~~dlii~D~~l~~~ 64 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEE-TGY-Q---TE-HVRNGREAVRFLSLTRPDLIISDVLMPEM 64 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHT-TTC-E---EE-EESSHHHHHHHHTTCCCSEEEEESCCSSS
T ss_pred CCcEEEEeCCHHHHHHHHHHHHH-CCC-E---EE-EeCCHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999987 464 2 42 333433221 123579999999887654
No 442
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=52.80 E-value=13 Score=23.48 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=36.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--CCCCCCcCEEEEccCCCch
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--HAEEGPYDIIHLGAACIEV 75 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--~~~~~~fD~I~i~~~~~~i 75 (156)
.+|.-+|-++...+..+..++. .|+ . +. ...++.+. .....++|.|+++...+..
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~-~g~-~---v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~~~ 59 (127)
T 2jba_A 3 RRILVVEDEAPIREMVCFVLEQ-NGF-Q---PV-EAEDYDSAVNQLNEPWPDLILLAWMLPGG 59 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EECSHHHHHTTCSSSCCSEEEEESEETTE
T ss_pred cEEEEEcCCHHHHHHHHHHHHH-CCc-e---EE-EeCCHHHHHHHHhccCCCEEEEecCCCCC
Confidence 4788999999999998888887 354 2 33 23333221 1223569999999876643
No 443
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=52.73 E-value=54 Score=24.66 Aligned_cols=58 Identities=14% Similarity=-0.008 Sum_probs=41.3
Q ss_pred hcCCCCEEEEEe-CCHHHHHHHHHHHh-hhcCCCCccceEEEEccCCCCC-----------------C----------CC
Q psy14971 10 IKGERALVLILN-HYMKVKSKNQNNKK-LNIKQNRKSFKNVSVKDGSKGH-----------------A----------EE 60 (156)
Q Consensus 10 l~g~~g~V~avD-~~~~~~~~A~~~l~-~~~g~~n~~~v~~~~gD~~~~~-----------------~----------~~ 60 (156)
+...+.+|+.++ ++++.++.+.+.++ . .+ .+ +.++.+|..+.. . ..
T Consensus 29 la~~G~~V~~~~~r~~~~~~~~~~~l~~~-~~-~~---~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 103 (291)
T 1e7w_A 29 LHAEGYAVCLHYHRSAAEANALSATLNAR-RP-NS---AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW 103 (291)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHHHH-ST-TC---EEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHHhhh-cC-Ce---eEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhc
Confidence 344467999999 99988887777775 3 24 35 889999987532 0 01
Q ss_pred CCcCEEEEccCC
Q psy14971 61 GPYDIIHLGAAC 72 (156)
Q Consensus 61 ~~fD~I~i~~~~ 72 (156)
++.|.++.+++.
T Consensus 104 g~iD~lvnnAg~ 115 (291)
T 1e7w_A 104 GRCDVLVNNASS 115 (291)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999999875
No 444
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=52.62 E-value=39 Score=27.48 Aligned_cols=71 Identities=10% Similarity=0.073 Sum_probs=47.4
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----CCCCCcCEEEEccCCCchH---HHHHhhCCC
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----AEEGPYDIIHLGAACIEVP---KEILAQLKP 85 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----~~~~~fD~I~i~~~~~~i~---~~l~~~L~p 85 (156)
.+-.|+.+|.+++.++.++ . .| +.++.||+.... ......|.|++...-.... -...+.+.|
T Consensus 26 ~g~~vvvId~d~~~v~~~~----~-~g------~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 26 SGVKMVVLDHDPDHIETLR----K-FG------MKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp TTCCEEEEECCHHHHHHHH----H-TT------CCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCHHHHHHHH----h-CC------CeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 3568999999999988775 3 24 457889987631 1234689999877654322 234566778
Q ss_pred CcEEEEEec
Q psy14971 86 GGRLVFHKG 94 (156)
Q Consensus 86 GGrLv~~~~ 94 (156)
..++++-..
T Consensus 95 ~~~Iiara~ 103 (413)
T 3l9w_A 95 HLQIIARAR 103 (413)
T ss_dssp TCEEEEEES
T ss_pred CCeEEEEEC
Confidence 877777543
No 445
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=52.61 E-value=23 Score=26.38 Aligned_cols=59 Identities=17% Similarity=0.040 Sum_probs=36.5
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
.+...+.+|+.++++++ .+...+.+....+ + +.++.+|..+... ..++.|.++.+++..
T Consensus 27 ~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~---~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 95 (275)
T 2pd4_A 27 SCFNQGATLAFTYLNES-LEKRVRPIAQELN--S---PYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFA 95 (275)
T ss_dssp HHHTTTCEEEEEESSTT-THHHHHHHHHHTT--C---CCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCC
T ss_pred HHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--C---cEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 34555689999999986 3333333333122 4 6788889865210 124789999998753
No 446
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=52.56 E-value=17 Score=28.28 Aligned_cols=63 Identities=14% Similarity=0.119 Sum_probs=39.9
Q ss_pred chHHHHHHhcCCCCE-EEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC----CCCcCEEEEccCCC
Q psy14971 2 GDLNVIVGIKGERAL-VLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE----EGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la~la~l~g~~g~-V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~----~~~fD~I~i~~~~~ 73 (156)
|-+++-.+..|-... |.++|+++...+.-+.|.. + ..++.+|..+.... .+.+|+++.+.+|.
T Consensus 27 GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~---~~~~~~DI~~i~~~~i~~~~~~Dll~ggpPCQ 94 (295)
T 2qrv_A 27 ATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------G---KIMYVGDVRSVTQKHIQEWGPFDLVIGGSPCN 94 (295)
T ss_dssp THHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------T---CEEEECCGGGCCHHHHHHTCCCSEEEECCCCG
T ss_pred cHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------C---CceeCCChHHccHHHhcccCCcCEEEecCCCc
Confidence 334444444553222 7999999998776666542 3 45778888764322 24699999988764
No 447
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=52.50 E-value=42 Score=24.63 Aligned_cols=60 Identities=18% Similarity=0.098 Sum_probs=44.5
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
+++..+.+|+.++++++.++.+.+.++. .+..+ +.++.+|..+... ..++.|.++.+++.
T Consensus 42 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~---~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 42 RALLEGADVVISDYHERRLGETRDQLAD-LGLGR---VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHHHHHT-TCSSC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHCCCEEEEecCCHHHHHHHHHHHHh-cCCCc---eEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 3444568999999999998888888866 34446 9999999875211 01478999999875
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=52.47 E-value=41 Score=25.60 Aligned_cols=66 Identities=9% Similarity=-0.013 Sum_probs=42.1
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEE-ccCCCCCCCCCCcCEEEEccCCCchHHHHHhhCCCCcEEEEE
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSV-KDGSKGHAEEGPYDIIHLGAACIEVPKEILAQLKPGGRLVFH 92 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~-gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~~~L~pGGrLv~~ 92 (156)
+.+|+.+|.+++..+.+ .. +|. +.+. .+..+. ....|.|++..+..-+.+...+.+++|+.++-.
T Consensus 178 G~~V~~~dr~~~~~~~~----~~-~g~------~~~~~~~l~~~---l~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 178 GAKVKVGARESDLLARI----AE-MGM------EPFHISKAAQE---LRDVDVCINTIPALVVTANVLAEMPSHTFVIDL 243 (293)
T ss_dssp TCEEEEEESSHHHHHHH----HH-TTS------EEEEGGGHHHH---TTTCSEEEECCSSCCBCHHHHHHSCTTCEEEEC
T ss_pred CCEEEEEECCHHHHHHH----HH-CCC------eecChhhHHHH---hcCCCEEEECCChHHhCHHHHHhcCCCCEEEEe
Confidence 35999999998755433 23 342 2221 111111 245899999988766666778889999877654
Q ss_pred e
Q psy14971 93 K 93 (156)
Q Consensus 93 ~ 93 (156)
.
T Consensus 244 a 244 (293)
T 3d4o_A 244 A 244 (293)
T ss_dssp S
T ss_pred c
Confidence 4
No 449
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=52.00 E-value=30 Score=25.96 Aligned_cols=59 Identities=20% Similarity=0.170 Sum_probs=43.3
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC---------CCCCcCEEEEccCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA---------EEGPYDIIHLGAAC 72 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~---------~~~~fD~I~i~~~~ 72 (156)
.+...+.+|+.++++++.++.+.+.+.. .+ .+ +.++.+|..+... ..++.|.++.+++.
T Consensus 52 ~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 52 GLAGAGAHVILHGVKPGSTAAVQQRIIA-SG-GT---AQELAGDLSEAGAGTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp HHHHTTCEEEEEESSTTTTHHHHHHHHH-TT-CC---EEEEECCTTSTTHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHCCCEEEEEcCCHHHHHHHHHHHHh-cC-Ce---EEEEEecCCCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 3444568999999999888888877766 34 35 8999999875321 01478999999875
No 450
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=51.54 E-value=44 Score=24.91 Aligned_cols=58 Identities=12% Similarity=0.011 Sum_probs=41.4
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..+..|.++.+++.
T Consensus 42 l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 42 LGKEGLRVFVCARGEEGLRTTLKELRE-AG-VE---ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---eEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 344457999999999888777777765 34 35 8889999865210 12478999999875
No 451
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=51.28 E-value=37 Score=21.76 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=47.0
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhh-hcCCCCccceEEEEccCCCC--CCCC-CCcCEEEEccCCC-chHH-HHHh---h--
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKL-NIKQNRKSFKNVSVKDGSKG--HAEE-GPYDIIHLGAACI-EVPK-EILA---Q-- 82 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~-~~g~~n~~~v~~~~gD~~~~--~~~~-~~fD~I~i~~~~~-~i~~-~l~~---~-- 82 (156)
..+|.-+|-++...+..+..++. . |+ + +. ...++.+. .... .+||+|+++...+ .... .+.+ .
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~-~~-~---v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~ 77 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIG-EY-D---FI-EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNS 77 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHC-CC-E---EE-EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSG
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcc-Cc-c---EE-EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCc
Confidence 36899999999999999988887 3 43 2 33 33343221 1223 6799999999887 5431 2222 2
Q ss_pred CCCCcEEEEEec
Q psy14971 83 LKPGGRLVFHKG 94 (156)
Q Consensus 83 L~pGGrLv~~~~ 94 (156)
..+.-.+++...
T Consensus 78 ~~~~~~ii~ls~ 89 (140)
T 3lua_A 78 RTANTPVIIATK 89 (140)
T ss_dssp GGTTCCEEEEES
T ss_pred ccCCCCEEEEeC
Confidence 345555655554
No 452
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=51.25 E-value=35 Score=25.02 Aligned_cols=59 Identities=15% Similarity=0.014 Sum_probs=41.3
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC-----C------CCCcCEEEEccCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA-----E------EGPYDIIHLGAAC 72 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~-----~------~~~fD~I~i~~~~ 72 (156)
+++..+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... . .++.|.++.+++.
T Consensus 33 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 33 EFAGFGAVIHTCARNEYELNECLSKWQK-KG-FQ---VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Ce---eEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCC
Confidence 3444567999999999887777777765 24 35 8889999765210 0 0578999998875
No 453
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=50.95 E-value=7.4 Score=39.09 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=35.0
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC-CCCCCCcCEEEEccCCCchH------HHHHhhCCCCcE
Q psy14971 16 LVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG-HAEEGPYDIIHLGAACIEVP------KEILAQLKPGGR 88 (156)
Q Consensus 16 ~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~-~~~~~~fD~I~i~~~~~~i~------~~l~~~L~pGGr 88 (156)
.-+-.|+++.+.+.|+++++. + + ++.-.-|..+. -.....||.|+.....+..+ ..+.+.|||||+
T Consensus 1271 ~yt~td~s~~~~~~a~~~f~~-~---d---i~~~~~d~~~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~ 1343 (2512)
T 2vz8_A 1271 DYTATDRNPQALEAAQAKLEQ-L---H---VTQGQWDPANPAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGF 1343 (2512)
T ss_dssp EEEEECSSSSSTTTTTTTHHH-H---T---EEEECCCSSCCCC-----CCEEEEECC--------------------CCE
T ss_pred eEEEecCChHHHHHHHHHhhh-c---c---cccccccccccccCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcE
Confidence 556678998888888888876 3 2 33321132211 00234699999887665322 356788999999
Q ss_pred EEEEe
Q psy14971 89 LVFHK 93 (156)
Q Consensus 89 Lv~~~ 93 (156)
|++..
T Consensus 1344 l~~~e 1348 (2512)
T 2vz8_A 1344 LLLHT 1348 (2512)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98864
No 454
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=50.39 E-value=54 Score=23.44 Aligned_cols=61 Identities=8% Similarity=0.104 Sum_probs=39.6
Q ss_pred chHH--HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccce-EEEEccCCCCCCC-CCCcCEEEEccCCC
Q psy14971 2 GDLN--VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFK-NVSVKDGSKGHAE-EGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la--~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v-~~~~gD~~~~~~~-~~~fD~I~i~~~~~ 73 (156)
|++. +..+++..+.+|++++++++.++. +.. .+ + +++.+|..+.+.. .+..|.|+..++..
T Consensus 31 G~iG~~l~~~L~~~G~~V~~~~R~~~~~~~----~~~----~~---~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 31 GKVARYLLSELKNKGHEPVAMVRNEEQGPE----LRE----RG---ASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSGGGHHH----HHH----TT---CSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ChHHHHHHHHHHhCCCeEEEEECChHHHHH----HHh----CC---CceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 4554 233445556799999999875432 222 14 7 8899998733322 35789999998764
No 455
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=50.11 E-value=77 Score=23.62 Aligned_cols=57 Identities=9% Similarity=-0.117 Sum_probs=40.1
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC----------CCCCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG----------HAEEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~----------~~~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++...+.+.. . .+ +.++.+|..+. ....++.|.++.+++.
T Consensus 41 La~~G~~V~~~~r~~~~~~~~~~~~~~--~-~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~ 107 (272)
T 2nwq_A 41 FAEAGWSLVLTGRREERLQALAGELSA--K-TR---VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGL 107 (272)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHTT--T-SC---EEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCC
T ss_pred HHHCCCEEEEEECCHHHHHHHHHHhhc--C-Cc---EEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 444567999999999887776666544 1 35 88899998652 1112568999999875
No 456
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=50.10 E-value=34 Score=25.59 Aligned_cols=59 Identities=17% Similarity=0.086 Sum_probs=40.9
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC----------CCCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH----------AEEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~----------~~~~~fD~I~i~~~~ 72 (156)
++..+.+|+.++++++.++...+.+....+ .+ +.++.+|..+.. ...+++|.++.+++.
T Consensus 46 L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~---~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 46 LSSLGAQCVIASRKMDVLKATAEQISSQTG-NK---VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SC---EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-Cc---eEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 444467999999999887776666654113 35 899999986521 012468999999874
No 457
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=50.08 E-value=40 Score=27.37 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=45.0
Q ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEE-EccCCCCCC----------------C-CCCcCEEEE
Q psy14971 7 IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVS-VKDGSKGHA----------------E-EGPYDIIHL 68 (156)
Q Consensus 7 la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~-~gD~~~~~~----------------~-~~~fD~I~i 68 (156)
++...| .+|+.+|++++.++.+++ +|..- +.+- .+++..++. + ....|+|+.
T Consensus 202 ~a~~lG--a~V~v~D~~~~~l~~~~~-----lGa~~---~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~ 271 (381)
T 3p2y_A 202 TAKRLG--AKTTGYDVRPEVAEQVRS-----VGAQW---LDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVIT 271 (381)
T ss_dssp HHHHHT--CEEEEECSSGGGHHHHHH-----TTCEE---CCCC-------------CHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHCC--CEEEEEeCCHHHHHHHHH-----cCCeE---EeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEE
Confidence 344455 689999999998877764 13110 1000 011111111 1 256899998
Q ss_pred ccCCC-----c-hHHHHHhhCCCCcEEEEEeccC
Q psy14971 69 GAACI-----E-VPKEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 69 ~~~~~-----~-i~~~l~~~L~pGGrLv~~~~~~ 96 (156)
+...+ . +.+...+.+|||..+|-...+.
T Consensus 272 tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~ 305 (381)
T 3p2y_A 272 TALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET 305 (381)
T ss_dssp CCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred CCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC
Confidence 75332 2 4578899999988877655443
No 458
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=49.68 E-value=46 Score=24.62 Aligned_cols=61 Identities=15% Similarity=0.033 Sum_probs=42.7
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCC-CCccceEEEEccCCCCC------CCCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQ-NRKSFKNVSVKDGSKGH------AEEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~-~n~~~v~~~~gD~~~~~------~~~~~fD~I~i~~~~~ 73 (156)
++...+.+|+.++++++.++.+.+.+... +. .. +.++.+|..+.. ...++.|.++.+++..
T Consensus 29 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~---~~~~~~D~~~~~~~~~~~~~~g~id~lv~nAg~~ 96 (267)
T 3t4x_A 29 SLVAEGANVLINGRREENVNETIKEIRAQ-YPDAI---LQPVVADLGTEQGCQDVIEKYPKVDILINNLGIF 96 (267)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHHHHHHHH-CTTCE---EEEEECCTTSHHHHHHHHHHCCCCSEEEECCCCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCce---EEEEecCCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 34445689999999999888877777652 32 23 778888876421 1135789999998753
No 459
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=49.53 E-value=41 Score=21.98 Aligned_cols=76 Identities=18% Similarity=0.152 Sum_probs=46.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEE-EEccCCCCC--CCCCCcCEEEEccCCCchHH-HHH---hhCCCCc
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNV-SVKDGSKGH--AEEGPYDIIHLGAACIEVPK-EIL---AQLKPGG 87 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~-~~gD~~~~~--~~~~~fD~I~i~~~~~~i~~-~l~---~~L~pGG 87 (156)
-+|.-+|-++...+..++.++. .+. . ..+ ...++.+.. ....+||+|+++...+.... .+. +...+.-
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~-~~~-~---~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~ 95 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTL-QPD-V---ESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLET 95 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHT-STT-E---EEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSC
T ss_pred cEEEEEcCCHHHHHHHHHHHHh-CCC-c---EEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCC
Confidence 3799999999999999888876 341 1 223 233333221 12356999999988765431 222 2334566
Q ss_pred EEEEEecc
Q psy14971 88 RLVFHKGL 95 (156)
Q Consensus 88 rLv~~~~~ 95 (156)
.+++....
T Consensus 96 ~ii~ls~~ 103 (150)
T 4e7p_A 96 KVVVVTTF 103 (150)
T ss_dssp EEEEEESC
T ss_pred eEEEEeCC
Confidence 66665543
No 460
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=49.39 E-value=55 Score=26.01 Aligned_cols=70 Identities=10% Similarity=0.043 Sum_probs=45.6
Q ss_pred chHH-HHH-HhcCCC-CEEEEEeCCHHHHHHHHHHHhhhcCC--CCccceEEEEccCCCCC-----CCCCCcCEEEEccC
Q psy14971 2 GDLN-VIV-GIKGER-ALVLILNHYMKVKSKNQNNKKLNIKQ--NRKSFKNVSVKDGSKGH-----AEEGPYDIIHLGAA 71 (156)
Q Consensus 2 G~la-~la-~l~g~~-g~V~avD~~~~~~~~A~~~l~~~~g~--~n~~~v~~~~gD~~~~~-----~~~~~fD~I~i~~~ 71 (156)
|++. .++ +++..+ ..|+++++++..+....+.+....+. .+ +.++.+|..+.. .....+|.||..++
T Consensus 45 G~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~---v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 45 GSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGD---FQTFALDIGSIEYDAFIKADGQYDYVLNLSA 121 (399)
T ss_dssp SHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSE---EEEECCCTTSHHHHHHHHHCCCCSEEEECCC
T ss_pred hHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCc---EEEEEEeCCCHHHHHHHHHhCCCCEEEECCC
Confidence 5555 233 344444 59999999998877766666542121 34 899999987531 11256899999887
Q ss_pred CCc
Q psy14971 72 CIE 74 (156)
Q Consensus 72 ~~~ 74 (156)
..+
T Consensus 122 ~~~ 124 (399)
T 3nzo_A 122 LKH 124 (399)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
No 461
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=49.12 E-value=28 Score=22.35 Aligned_cols=75 Identities=9% Similarity=0.079 Sum_probs=47.2
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCC-CCcCEEEEccCCCchH-HHHHhhCC---C
Q psy14971 13 ERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEE-GPYDIIHLGAACIEVP-KEILAQLK---P 85 (156)
Q Consensus 13 ~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~-~~fD~I~i~~~~~~i~-~~l~~~L~---p 85 (156)
+..+|.-+|-++...+..++.++. .|+ + +. ...++.+.. ... ..||+|+++...+... -.+.+.|+ +
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~ 87 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYHLNQ-LGA-E---VT-VHPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTK 87 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHH-cCC-E---EE-EeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCC
Confidence 457899999999999999999987 464 3 43 333332221 123 5799999998876543 23344443 4
Q ss_pred CcEEEEEe
Q psy14971 86 GGRLVFHK 93 (156)
Q Consensus 86 GGrLv~~~ 93 (156)
.-.+++..
T Consensus 88 ~~~ii~ls 95 (138)
T 2b4a_A 88 QPSVLILT 95 (138)
T ss_dssp CCEEEEEE
T ss_pred CCCEEEEE
Confidence 44555544
No 462
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=48.83 E-value=19 Score=28.22 Aligned_cols=34 Identities=9% Similarity=-0.068 Sum_probs=25.7
Q ss_pred chHHHHHHhcCCCCEEEEEeCCH---HHHHHHHHHHhhh
Q psy14971 2 GDLNVIVGIKGERALVLILNHYM---KVKSKNQNNKKLN 37 (156)
Q Consensus 2 G~la~la~l~g~~g~V~avD~~~---~~~~~A~~~l~~~ 37 (156)
|-.++.|..+| .+.+++|+++ +..+.|++++++.
T Consensus 254 Gtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 254 GVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 44555666665 7999999999 9999999999873
No 463
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=48.69 E-value=22 Score=23.44 Aligned_cols=59 Identities=12% Similarity=0.089 Sum_probs=38.2
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CC------CCCcCEEEEccCCCchH
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AE------EGPYDIIHLGAACIEVP 76 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~------~~~fD~I~i~~~~~~i~ 76 (156)
.-+|.-+|-++...+..+..++. .+... ......++.+.+ .. ...+|+|+++...+...
T Consensus 8 ~~~ILivdd~~~~~~~l~~~L~~-~~~~~---~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~ 75 (149)
T 1i3c_A 8 PKVILLVEDSKADSRLVQEVLKT-STIDH---ELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKD 75 (149)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHS-CCSCE---EEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSC
T ss_pred CCeEEEEECCHHHHHHHHHHHHh-cCCCc---cEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCc
Confidence 35799999999999999999887 35421 112333332211 11 13699999998877543
No 464
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=48.61 E-value=53 Score=24.50 Aligned_cols=60 Identities=17% Similarity=0.052 Sum_probs=41.9
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
.++..+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..++.|.++.+++..
T Consensus 63 ~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 63 MLAKSVSHVICISRTQKSCDSVVDEIKS-FG-YE---SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp HHTTTSSEEEEEESSHHHHHHHHHHHHT-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred HHHHcCCEEEEEcCCHHHHHHHHHHHHh-cC-Cc---eeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4455567999999998877777666665 24 35 8889999865210 114689999998753
No 465
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=48.46 E-value=26 Score=26.23 Aligned_cols=60 Identities=13% Similarity=0.039 Sum_probs=44.0
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
+++..+.+|+.++++++.++.+.+.++. .+ .+ +.++.+|..+... ..++.|.++.+++..
T Consensus 45 ~la~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 45 GLAVAGARILINGTDPSRVAQTVQEFRN-VG-HD---AEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQ 114 (271)
T ss_dssp HHHHTTCEEEECCSCHHHHHHHHHHHHH-TT-CC---EEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---eEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 3444567999999999998888888876 35 35 8899999865211 124789999998753
No 466
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=48.06 E-value=10 Score=24.60 Aligned_cols=75 Identities=11% Similarity=0.088 Sum_probs=46.9
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchH-HHHHhhCC-----C
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVP-KEILAQLK-----P 85 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~-~~l~~~L~-----p 85 (156)
..+|.-+|-++...+..++.++. .|+ + +. ...++.+... ...+||+|+++...+... -.+.+.|+ +
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~-~g~-~---v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 79 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEK-GGF-D---SD-MVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTR 79 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGT
T ss_pred CCCEEEEcCCHHHHHHHHHHHHH-CCC-e---EE-EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccC
Confidence 36899999999999999999988 464 2 32 2334332221 235799999998877543 23333333 4
Q ss_pred CcEEEEEec
Q psy14971 86 GGRLVFHKG 94 (156)
Q Consensus 86 GGrLv~~~~ 94 (156)
.-.+++...
T Consensus 80 ~~~ii~~s~ 88 (140)
T 3grc_A 80 DLAIVVVSA 88 (140)
T ss_dssp TCEEEEECT
T ss_pred CCCEEEEec
Confidence 555555444
No 467
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=47.99 E-value=33 Score=25.20 Aligned_cols=58 Identities=14% Similarity=0.043 Sum_probs=41.1
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..++.|.++.+++.
T Consensus 22 l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 22 LVKDGFAVAIADYNDATAKAVASEINQ-AG-GH---AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---EEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 444457999999999887777777765 34 35 8889999865210 12478999998864
No 468
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=47.96 E-value=47 Score=25.33 Aligned_cols=66 Identities=9% Similarity=-0.052 Sum_probs=41.8
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEE-ccCCCCCCCCCCcCEEEEccCCCchHHHHHhhCCCCcEEEEE
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSV-KDGSKGHAEEGPYDIIHLGAACIEVPKEILAQLKPGGRLVFH 92 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~-gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~~~L~pGGrLv~~ 92 (156)
+.+|+.+|++++..+.++ . +| ++.+. .+..+. ....|.|++..+..-+.+...+.+++|+.++-.
T Consensus 180 G~~V~~~d~~~~~~~~~~----~-~g------~~~~~~~~l~~~---l~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 180 GANVKVGARSSAHLARIT----E-MG------LVPFHTDELKEH---VKDIDICINTIPSMILNQTVLSSMTPKTLILDL 245 (300)
T ss_dssp TCEEEEEESSHHHHHHHH----H-TT------CEEEEGGGHHHH---STTCSEEEECCSSCCBCHHHHTTSCTTCEEEEC
T ss_pred CCEEEEEECCHHHHHHHH----H-CC------CeEEchhhHHHH---hhCCCEEEECCChhhhCHHHHHhCCCCCEEEEE
Confidence 469999999987544332 3 24 22222 121111 245899999988866666677889998877654
Q ss_pred e
Q psy14971 93 K 93 (156)
Q Consensus 93 ~ 93 (156)
.
T Consensus 246 a 246 (300)
T 2rir_A 246 A 246 (300)
T ss_dssp S
T ss_pred e
Confidence 4
No 469
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=47.73 E-value=55 Score=27.30 Aligned_cols=72 Identities=10% Similarity=-0.005 Sum_probs=42.2
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCc-hH----------------
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIE-VP---------------- 76 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~-i~---------------- 76 (156)
+..|++.|..+.- ...+.|+. .| +.+..|.-.+.+ ...+|.|+.+.+++. -|
T Consensus 43 G~~V~~sD~~~~~--~~~~~L~~-~g------i~~~~G~~~~~~--~~~~d~vV~Spgi~~~~p~l~~a~~~gi~v~~~~ 111 (524)
T 3hn7_A 43 GHTVTGSDANIYP--PMSTQLEQ-AG------VTIEEGYLIAHL--QPAPDLVVVGNAMKRGMDVIEYMLDTGLRYTSGP 111 (524)
T ss_dssp TCEEEEEESCCCT--THHHHHHH-TT------CEEEESCCGGGG--CSCCSEEEECTTCCTTSHHHHHHHHHTCCEEEHH
T ss_pred CCEEEEECCCCCc--HHHHHHHH-CC------CEEECCCCHHHc--CCCCCEEEECCCcCCCCHHHHHHHHCCCcEEEHH
Confidence 4799999986421 12345555 34 667776432212 135899999988752 22
Q ss_pred HHHHhhCCCCcEEEEEeccC
Q psy14971 77 KEILAQLKPGGRLVFHKGLH 96 (156)
Q Consensus 77 ~~l~~~L~pGGrLv~~~~~~ 96 (156)
+-+.+.+..+..+|.+.++.
T Consensus 112 e~l~~~~~~~~~vIaVTGTn 131 (524)
T 3hn7_A 112 QFLSEQVLQSRHVIAVAGTH 131 (524)
T ss_dssp HHHHHHTGGGSEEEEEECSS
T ss_pred HHHHHHHhccCcEEEEECCC
Confidence 12344455566788877754
No 470
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=47.69 E-value=48 Score=25.08 Aligned_cols=58 Identities=16% Similarity=0.063 Sum_probs=41.4
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
++..+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..+..|.++.+++.
T Consensus 54 L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 121 (291)
T 3cxt_A 54 YAKAGATIVFNDINQELVDRGMAAYKA-AG-IN---AHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGI 121 (291)
T ss_dssp HHHTTCEEEEEESSHHHHHHHHHHHHH-TT-CC---CEEEECCTTCHHHHHHHHHHHHHHTCCCCEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Ce---EEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCc
Confidence 444567999999999888777777765 34 35 8889999865210 12468999999875
No 471
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=47.66 E-value=43 Score=26.37 Aligned_cols=34 Identities=9% Similarity=-0.017 Sum_probs=24.8
Q ss_pred CCCcCEEEEccCCC----chH--------HHHHhhCCCC-cEEEEEe
Q psy14971 60 EGPYDIIHLGAACI----EVP--------KEILAQLKPG-GRLVFHK 93 (156)
Q Consensus 60 ~~~fD~I~i~~~~~----~i~--------~~l~~~L~pG-GrLv~~~ 93 (156)
..++|.|+++.+.. .+. +...+.|+|| |.+|+=+
T Consensus 145 ~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 145 TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 46899999998876 111 1235789999 9999854
No 472
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=47.55 E-value=24 Score=22.31 Aligned_cols=74 Identities=12% Similarity=-0.003 Sum_probs=45.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH-HHHHhh---CCCCcE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP-KEILAQ---LKPGGR 88 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~-~~l~~~---L~pGGr 88 (156)
.+|.-+|-++...+..+..++. .|+ . +. ...++.+.. ....++|.|+++...+... -.+.+. ..+.-.
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~-~~~-~---v~-~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ 77 (126)
T 1dbw_A 4 YTVHIVDDEEPVRKSLAFMLTM-NGF-A---VK-MHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIP 77 (126)
T ss_dssp CEEEEEESSHHHHHHHHHHHHH-TTC-E---EE-EESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCC
T ss_pred CEEEEEcCCHHHHHHHHHHHHh-CCc-E---EE-EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCC
Confidence 5899999999999999988887 354 2 33 333432221 1235689999998776543 122222 345555
Q ss_pred EEEEec
Q psy14971 89 LVFHKG 94 (156)
Q Consensus 89 Lv~~~~ 94 (156)
+++...
T Consensus 78 ii~~s~ 83 (126)
T 1dbw_A 78 SIVITG 83 (126)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 555544
No 473
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=46.52 E-value=79 Score=24.33 Aligned_cols=58 Identities=14% Similarity=-0.008 Sum_probs=41.4
Q ss_pred hcCCCCEEEEEe-CCHHHHHHHHHHHh-hhcCCCCccceEEEEccCCCCC-----------------C----------CC
Q psy14971 10 IKGERALVLILN-HYMKVKSKNQNNKK-LNIKQNRKSFKNVSVKDGSKGH-----------------A----------EE 60 (156)
Q Consensus 10 l~g~~g~V~avD-~~~~~~~~A~~~l~-~~~g~~n~~~v~~~~gD~~~~~-----------------~----------~~ 60 (156)
++..+.+|+.++ ++++.++.+.+.+. . .+ .+ +.++.+|..+.. . ..
T Consensus 66 La~~G~~Vv~~~~r~~~~~~~~~~~l~~~-~~-~~---~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 140 (328)
T 2qhx_A 66 LHAEGYAVCLHYHRSAAEANALSATLNAR-RP-NS---AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW 140 (328)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHHHH-ST-TC---EEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHHHhh-cC-Ce---EEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhc
Confidence 344567999999 99988887777775 3 24 35 889999987532 0 01
Q ss_pred CCcCEEEEccCC
Q psy14971 61 GPYDIIHLGAAC 72 (156)
Q Consensus 61 ~~fD~I~i~~~~ 72 (156)
+..|.++.+++.
T Consensus 141 g~iD~lVnnAG~ 152 (328)
T 2qhx_A 141 GRCDVLVNNASS 152 (328)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999999875
No 474
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=46.14 E-value=63 Score=24.08 Aligned_cols=58 Identities=19% Similarity=0.081 Sum_probs=35.5
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
++..+.+|+.++++++..+. .+.+.... .+ +.++.+|..+... ..++.|.++.+++..
T Consensus 43 l~~~G~~V~~~~r~~~~~~~-~~~l~~~~--~~---~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 43 FHREGAQLAFTYATPKLEKR-VREIAKGF--GS---DLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHHTTCEEEEEESSGGGHHH-HHHHHHHT--TC---CCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCC
T ss_pred HHHcCCEEEEEeCCHHHHHH-HHHHHHhc--CC---eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 44456799999999863222 23333212 24 6788889865210 124789999998753
No 475
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=45.96 E-value=26 Score=22.56 Aligned_cols=74 Identities=7% Similarity=0.034 Sum_probs=46.1
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchHH-HHHhh---CCCCc
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVPK-EILAQ---LKPGG 87 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~~-~l~~~---L~pGG 87 (156)
..+|.-+|-++...+..++.++. .|+ . +. ...++.+.. ....+||+|+++. .+.... .+.+. ..+.-
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~ 76 (142)
T 2qxy_A 4 TPTVMVVDESRITFLAVKNALEK-DGF-N---VI-WAKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDT 76 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHGG-GTC-E---EE-EESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHh-CCC-E---EE-EECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCC
Confidence 35899999999999999999987 465 2 44 333433221 1235799999998 765431 22222 24555
Q ss_pred EEEEEec
Q psy14971 88 RLVFHKG 94 (156)
Q Consensus 88 rLv~~~~ 94 (156)
.+++...
T Consensus 77 pii~ls~ 83 (142)
T 2qxy_A 77 KVAVLSA 83 (142)
T ss_dssp EEEEEES
T ss_pred CEEEEEC
Confidence 5555544
No 476
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=45.63 E-value=1e+02 Score=23.75 Aligned_cols=66 Identities=12% Similarity=0.021 Sum_probs=39.5
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCC-CCCCCCCcCEEEEccCCCchH---HHHHhhCCCCcEEE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSK-GHAEEGPYDIIHLGAACIEVP---KEILAQLKPGGRLV 90 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~-~~~~~~~fD~I~i~~~~~~i~---~~l~~~L~pGGrLv 90 (156)
..|+++|++++.++.++ . .|... -...|..+ . ....|.|++..+...+. +.+...|++|..+
T Consensus 59 ~~V~~~dr~~~~~~~a~----~-~G~~~-----~~~~~~~~~~---~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv- 124 (314)
T 3ggo_A 59 GKIYGYDINPESISKAV----D-LGIID-----EGTTSIAKVE---DFSPDFVMLSSPVRTFREIAKKLSYILSEDATV- 124 (314)
T ss_dssp SEEEEECSCHHHHHHHH----H-TTSCS-----EEESCTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHHSCTTCEE-
T ss_pred CEEEEEECCHHHHHHHH----H-CCCcc-----hhcCCHHHHh---hccCCEEEEeCCHHHHHHHHHHHhhccCCCcEE-
Confidence 38999999998877654 3 25321 12233222 1 23479999987766544 3455667777654
Q ss_pred EEec
Q psy14971 91 FHKG 94 (156)
Q Consensus 91 ~~~~ 94 (156)
+.++
T Consensus 125 ~d~~ 128 (314)
T 3ggo_A 125 TDQG 128 (314)
T ss_dssp EECC
T ss_pred EECC
Confidence 4443
No 477
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=45.56 E-value=13 Score=29.51 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=39.9
Q ss_pred HHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC---CCCcCEEEEccCCCc
Q psy14971 4 LNVIVGIKGE-RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE---EGPYDIIHLGAACIE 74 (156)
Q Consensus 4 la~la~l~g~-~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~---~~~fD~I~i~~~~~~ 74 (156)
+++-.+..|- ...|.++|+++...+.-+.|+.. ..++.+|..+.... ...+|.++.+.+|..
T Consensus 16 ~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~ 81 (333)
T 4h0n_A 16 MHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTILMSPPCQP 81 (333)
T ss_dssp HHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEEEECCCCCC
T ss_pred HHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEEEecCCCcc
Confidence 3433344443 24588999999988877777543 33566777654322 136899999888753
No 478
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=45.46 E-value=33 Score=25.75 Aligned_cols=57 Identities=14% Similarity=0.011 Sum_probs=40.1
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++...+.++. .+ + +.++.+|..+... ..++.|.++.+++.
T Consensus 49 L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~--~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 115 (276)
T 2b4q_A 49 LLEAGARVFICARDAEACADTATRLSA-YG--D---CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGT 115 (276)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHHHHTT-SS--C---EEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHh-cC--c---eEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 444567999999999887766666654 23 5 8888889765210 12478999999874
No 479
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=45.36 E-value=14 Score=23.26 Aligned_cols=74 Identities=14% Similarity=0.142 Sum_probs=44.5
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchH-HHHHhhCC--CCcEE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVP-KEILAQLK--PGGRL 89 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~-~~l~~~L~--pGGrL 89 (156)
.+|.-+|-++...+..+..++. .|+ . +. ...++.+... ...++|.|+++...+... -.+.+.|+ +.-.+
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~-~~~-~---v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~i 77 (123)
T 1xhf_A 4 PHILIVEDELVTRNTLKSIFEA-EGY-D---VF-EATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVAL 77 (123)
T ss_dssp CEEEEECSCHHHHHHHHHHHHT-TTC-E---EE-EESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEE
T ss_pred ceEEEEeCCHHHHHHHHHHHhh-CCc-E---EE-EeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcE
Confidence 5899999999999998888877 354 2 32 2333332211 134689999998876543 12223332 45555
Q ss_pred EEEec
Q psy14971 90 VFHKG 94 (156)
Q Consensus 90 v~~~~ 94 (156)
++...
T Consensus 78 i~~s~ 82 (123)
T 1xhf_A 78 MFLTG 82 (123)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 55443
No 480
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=45.35 E-value=23 Score=27.99 Aligned_cols=64 Identities=13% Similarity=0.030 Sum_probs=41.7
Q ss_pred chHHHHHHhcCC-CCEE-EEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCCC---CCCcCEEEEccCCCch
Q psy14971 2 GDLNVIVGIKGE-RALV-LILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAE---EGPYDIIHLGAACIEV 75 (156)
Q Consensus 2 G~la~la~l~g~-~g~V-~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~---~~~fD~I~i~~~~~~i 75 (156)
|=+++-.+..|- ...| .++|+++...+.-+.|+.. . ++.+|..+...+ ...+|.++.+.+|...
T Consensus 21 GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---------~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 21 GGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---------E-VQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp THHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---------C-CBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred hHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---------C-cccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 334444444542 2456 7999999999888888643 1 345777654332 1268999999888765
No 481
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=45.27 E-value=62 Score=21.19 Aligned_cols=64 Identities=13% Similarity=0.070 Sum_probs=39.5
Q ss_pred HHHHHHHHHhhhcCCCCccceEEEEccCCCCCCCCCCcCEEEEccCCCchHHHHHhhCCCCcEEEEEec
Q psy14971 26 VKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHAEEGPYDIIHLGAACIEVPKEILAQLKPGGRLVFHKG 94 (156)
Q Consensus 26 ~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~~~~~fD~I~i~~~~~~i~~~l~~~L~pGGrLv~~~~ 94 (156)
+++..++.++. .|++ +++......+.......||+|+++.-+....+.+.+...+-|.=|..+.
T Consensus 22 lv~km~~~a~~-~gi~----v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 22 LANAINEGANL-TEVR----VIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATR 85 (108)
T ss_dssp HHHHHHHHHHH-HTCS----EEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEECC
T ss_pred HHHHHHHHHHH-CCCc----eEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEEEeC
Confidence 34445555555 3653 6665433322222234599999988888777888887777777666553
No 482
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=45.05 E-value=40 Score=24.54 Aligned_cols=59 Identities=14% Similarity=0.056 Sum_probs=41.1
Q ss_pred hcCCCCEEEEEeC-CHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 10 IKGERALVLILNH-YMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 10 l~g~~g~V~avD~-~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
+...+.+|+.+++ +++.++...+.++. .+ .+ +.++.+|..+... ..++.|.++.+++..
T Consensus 24 l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 24 LAKQGANVVVNYAGNEQKANEVVDEIKK-LG-SD---AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp HHHTTCEEEEEESSCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHCCCEEEEEeCCCHHHHHHHHHHHHh-cC-Cc---EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3444679999999 88877777777765 34 35 8889999865211 014789999998753
No 483
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=44.86 E-value=35 Score=27.99 Aligned_cols=35 Identities=29% Similarity=0.261 Sum_probs=24.8
Q ss_pred CCcCEEEEccCCC------chHHHHHhhCCCCcEEEEEecc
Q psy14971 61 GPYDIIHLGAACI------EVPKEILAQLKPGGRLVFHKGL 95 (156)
Q Consensus 61 ~~fD~I~i~~~~~------~i~~~l~~~L~pGGrLv~~~~~ 95 (156)
...|+|+.+...+ -+.+...+.+|||..+|-....
T Consensus 274 ~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d 314 (405)
T 4dio_A 274 AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE 314 (405)
T ss_dssp HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence 3579999875333 2457889999999888776543
No 484
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=44.81 E-value=84 Score=24.84 Aligned_cols=69 Identities=17% Similarity=-0.009 Sum_probs=41.6
Q ss_pred chHH--HHHHhcCCCCEEEEEeCCHH---HHHHHHHHHhhhc-------CCCCccceEEEEccCCCC--CCCCCCcCEEE
Q psy14971 2 GDLN--VIVGIKGERALVLILNHYMK---VKSKNQNNKKLNI-------KQNRKSFKNVSVKDGSKG--HAEEGPYDIIH 67 (156)
Q Consensus 2 G~la--~la~l~g~~g~V~avD~~~~---~~~~A~~~l~~~~-------g~~n~~~v~~~~gD~~~~--~~~~~~fD~I~ 67 (156)
|++. ++.++...+.+|++++++++ ..+..++.++..+ ...+ +.++.+|..+. +.....+|.||
T Consensus 79 G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---v~~v~~Dl~d~~~l~~~~~~d~Vi 155 (427)
T 4f6c_A 79 GFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSN---IEVIVGDFECMDDVVLPENMDTII 155 (427)
T ss_dssp SHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTT---EEEEEECC---CCCCCSSCCSEEE
T ss_pred cHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCc---eEEEeCCCCCcccCCCcCCCCEEE
Confidence 5665 23345555678999999887 4444444443310 0135 99999998652 11235789999
Q ss_pred EccCCC
Q psy14971 68 LGAACI 73 (156)
Q Consensus 68 i~~~~~ 73 (156)
-.++..
T Consensus 156 h~A~~~ 161 (427)
T 4f6c_A 156 HAGART 161 (427)
T ss_dssp ECCCCC
T ss_pred ECCccc
Confidence 988764
No 485
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=44.73 E-value=50 Score=24.74 Aligned_cols=61 Identities=11% Similarity=-0.023 Sum_probs=41.6
Q ss_pred HhcCCCCEEEEEeC-CHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNH-YMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~-~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
+++..+.+|+.+++ +++.++...+.++. ..-.+ +.++.+|..+... ..++.|.++.+++..
T Consensus 44 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 115 (281)
T 3v2h_A 44 TLAKAGANIVLNGFGAPDEIRTVTDEVAG-LSSGT---VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQ 115 (281)
T ss_dssp HHHHTTCEEEEECCCCHHHHHHHHHHHHT-TCSSC---EEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCC
T ss_pred HHHHCCCEEEEEeCCChHHHHHHHHHHhh-ccCCc---EEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 34445679999998 77777777666655 22245 8899999865210 124789999998763
No 486
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=44.68 E-value=23 Score=26.69 Aligned_cols=60 Identities=13% Similarity=0.009 Sum_probs=43.7
Q ss_pred HhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCCC
Q psy14971 9 GIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAACI 73 (156)
Q Consensus 9 ~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~~ 73 (156)
++...+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..++.|.++.+++..
T Consensus 51 ~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~---~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 51 AYAEAGAQVAVAARHSDALQVVADEIAG-VG-GK---ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp HHHHTTCEEEEEESSGGGGHHHHHHHHH-TT-CC---CEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Ce---EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3444568999999999988888888776 35 35 8889999875211 014789999998764
No 487
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=44.31 E-value=22 Score=23.47 Aligned_cols=75 Identities=11% Similarity=0.029 Sum_probs=47.1
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH-HHHHhh---CCCCc
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP-KEILAQ---LKPGG 87 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~-~~l~~~---L~pGG 87 (156)
.-+|.-+|-++...+..+..++. .|+ . +. ...++.+.. ....+||+|+++...+... ..+.+. ..|.-
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 80 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKR-LGC-N---II-TFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDI 80 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHT-TTC-E---EE-EESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTS
T ss_pred CCeEEEEcCCHHHHHHHHHHHHH-cCC-e---EE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCC
Confidence 36899999999999999999887 364 2 33 333433221 1235699999998876543 122222 24556
Q ss_pred EEEEEec
Q psy14971 88 RLVFHKG 94 (156)
Q Consensus 88 rLv~~~~ 94 (156)
.+++...
T Consensus 81 ~ii~ls~ 87 (154)
T 2rjn_A 81 ERVVISG 87 (154)
T ss_dssp EEEEEEC
T ss_pred cEEEEec
Confidence 6666554
No 488
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=44.27 E-value=45 Score=27.46 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=43.2
Q ss_pred chHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCC--CC--CCCCcCEEEEccC
Q psy14971 2 GDLNV-IVGIKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKG--HA--EEGPYDIIHLGAA 71 (156)
Q Consensus 2 G~la~-la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~--~~--~~~~fD~I~i~~~ 71 (156)
|-++. +|+.+.....|.-+|.+++..+...+.+ ++ ..+++||+.+. +. .-...|.++..-.
T Consensus 244 G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l------~~---~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 244 GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL------EN---TIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC------TT---SEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC------CC---ceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 34443 6777777789999999999887776654 34 78999999863 11 1246798888543
No 489
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=43.98 E-value=80 Score=25.76 Aligned_cols=69 Identities=17% Similarity=-0.002 Sum_probs=42.5
Q ss_pred chHH--HHHHhcCCCCEEEEEeCCHH---HHHHHHHHHhhh-------cCCCCccceEEEEccCCCC--CCCCCCcCEEE
Q psy14971 2 GDLN--VIVGIKGERALVLILNHYMK---VKSKNQNNKKLN-------IKQNRKSFKNVSVKDGSKG--HAEEGPYDIIH 67 (156)
Q Consensus 2 G~la--~la~l~g~~g~V~avD~~~~---~~~~A~~~l~~~-------~g~~n~~~v~~~~gD~~~~--~~~~~~fD~I~ 67 (156)
|++. ++.++...+.+|+++.+++. ..+...++++.. ....+ ++++.+|..+. +.....+|.||
T Consensus 160 G~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---v~~v~~Dl~d~~~l~~~~~~D~Vi 236 (508)
T 4f6l_B 160 GFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSN---IEVIVGDFECMDDVVLPENMDTII 236 (508)
T ss_dssp SHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTT---EEEEEEBTTBCSSCCCSSCCSEEE
T ss_pred cchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCc---eEEEecCCcccccCCCccCCCEEE
Confidence 6776 33445555678999998877 333444443321 01135 99999998752 11235789999
Q ss_pred EccCCC
Q psy14971 68 LGAACI 73 (156)
Q Consensus 68 i~~~~~ 73 (156)
-.++..
T Consensus 237 h~Aa~~ 242 (508)
T 4f6l_B 237 HAGART 242 (508)
T ss_dssp ECCCC-
T ss_pred ECCcee
Confidence 988753
No 490
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=43.88 E-value=48 Score=25.63 Aligned_cols=53 Identities=15% Similarity=-0.038 Sum_probs=36.6
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--C-CCCcCEEEEccCCCch
Q psy14971 16 LVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--E-EGPYDIIHLGAACIEV 75 (156)
Q Consensus 16 ~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~-~~~fD~I~i~~~~~~i 75 (156)
+|+++++++.-.+..++.+.. .+ ++++.+|..+... . ...+|.||..++....
T Consensus 49 ~V~~~~r~~~~~~~~~~~~~~----~~---v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~ 104 (344)
T 2gn4_A 49 KIIVYSRDELKQSEMAMEFND----PR---MRFFIGDVRDLERLNYALEGVDICIHAAALKHV 104 (344)
T ss_dssp EEEEEESCHHHHHHHHHHHCC----TT---EEEEECCTTCHHHHHHHTTTCSEEEECCCCCCH
T ss_pred EEEEEECChhhHHHHHHHhcC----CC---EEEEECCCCCHHHHHHHHhcCCEEEECCCCCCC
Confidence 899999998766555444432 35 9999999875211 1 2368999999987643
No 491
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=43.13 E-value=44 Score=24.49 Aligned_cols=58 Identities=16% Similarity=0.054 Sum_probs=40.8
Q ss_pred hcCCCCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
+...+.+|+.++++++.++...+.++. .+ .+ +.++.+|..+... ..+..|.++.+++.
T Consensus 34 l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~-~~---~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 34 LAQDGAHVVVSSRKQENVDRTVATLQG-EG-LS---VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHTTCEEEEEESCHHHHHHHHHHHHH-TT-CC---EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHHHHh-cC-Cc---eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 444457999999999887777777765 24 35 8888899765210 01478999998875
No 492
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=42.91 E-value=23 Score=25.18 Aligned_cols=58 Identities=14% Similarity=0.239 Sum_probs=39.8
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC---------------CCCCcCEEEEccCCCchH
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA---------------EEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~---------------~~~~fD~I~i~~~~~~i~ 76 (156)
..+|.-+|-++...+..++.++. .|+.. +. ...++.+.+. ...+||+|+++...+.+.
T Consensus 61 ~~~ILiVdDd~~~~~~l~~~L~~-~g~~~---v~-~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~ 133 (206)
T 3mm4_A 61 GKRVLVVDDNFISRKVATGKLKK-MGVSE---VE-QCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMD 133 (206)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHH-TTCSE---EE-EESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHH-cCCCe---ee-eeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCC
Confidence 35899999999999999999988 47533 33 2334332211 113799999999887543
No 493
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=42.50 E-value=10 Score=24.21 Aligned_cols=56 Identities=16% Similarity=0.041 Sum_probs=39.1
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC--CCCCCcCEEEEccCCCchH
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH--AEEGPYDIIHLGAACIEVP 76 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~--~~~~~fD~I~i~~~~~~i~ 76 (156)
.+|.-+|-++...+..+..++. .|+ . +. ...++.+.. ....+||.|+++...+...
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~-~g~-~---v~-~~~~~~~al~~l~~~~~dlvllD~~~p~~~ 60 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKK-EGY-E---VI-EAENGQIALEKLSEFTPDLIVLXIMMPVMD 60 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EESSHHHHHHHHTTBCCSEEEECSCCSSSC
T ss_pred ceEEEEeCCHHHHHHHHHHHHH-CCc-E---EE-EeCCHHHHHHHHHhcCCCEEEEeccCCCCc
Confidence 4799999999999999988887 464 2 33 344443322 1235799999998877654
No 494
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=42.28 E-value=48 Score=25.25 Aligned_cols=69 Identities=14% Similarity=0.007 Sum_probs=40.4
Q ss_pred chHH--HHHHhcCCCCEEEEEeCCHHHHHHHHHHHhhhcC---CCCccceEEEEccCCCCCC---CCCCcCEEEEccCCC
Q psy14971 2 GDLN--VIVGIKGERALVLILNHYMKVKSKNQNNKKLNIK---QNRKSFKNVSVKDGSKGHA---EEGPYDIIHLGAACI 73 (156)
Q Consensus 2 G~la--~la~l~g~~g~V~avD~~~~~~~~A~~~l~~~~g---~~n~~~v~~~~gD~~~~~~---~~~~fD~I~i~~~~~ 73 (156)
|++. ++..++..+.+|+++++++.-.......+..... ..+ ++++.+|..+... -...+|.||..++..
T Consensus 35 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~ 111 (351)
T 3ruf_A 35 GFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSR---FCFIEGDIRDLTTCEQVMKGVDHVLHQAALG 111 (351)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTT---EEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCc---eEEEEccCCCHHHHHHHhcCCCEEEECCccC
Confidence 6666 3344555567999999965432222223322000 135 9999999865210 123689999998864
No 495
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=42.09 E-value=56 Score=21.35 Aligned_cols=75 Identities=15% Similarity=0.179 Sum_probs=47.2
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchH-HHHHh---hCCCCc
Q psy14971 14 RALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVP-KEILA---QLKPGG 87 (156)
Q Consensus 14 ~g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~-~~l~~---~L~pGG 87 (156)
..+|.-+|-++...+..++.++. .|+ . +. ...++.+... ...+||+|+++...+... -.+.+ ...+.-
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 87 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSP-LPY-T---LH-FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPST 87 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTT-SSC-E---EE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTS
T ss_pred CceEEEECCCHHHHHHHHHHhcc-cCc-E---EE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCC
Confidence 46899999999999999999887 454 2 33 3334333221 235799999998876543 12222 234555
Q ss_pred EEEEEec
Q psy14971 88 RLVFHKG 94 (156)
Q Consensus 88 rLv~~~~ 94 (156)
.+++...
T Consensus 88 ~ii~~s~ 94 (153)
T 3hv2_A 88 TRILLTG 94 (153)
T ss_dssp EEEEECC
T ss_pred eEEEEEC
Confidence 6665544
No 496
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=41.83 E-value=84 Score=23.44 Aligned_cols=58 Identities=12% Similarity=-0.079 Sum_probs=40.9
Q ss_pred hcCCCCEEEEEeC-CHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC----------CCCCcCEEEEccCC
Q psy14971 10 IKGERALVLILNH-YMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA----------EEGPYDIIHLGAAC 72 (156)
Q Consensus 10 l~g~~g~V~avD~-~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~----------~~~~fD~I~i~~~~ 72 (156)
++..+.+|+.+++ +++.++...+.+.. .+ .+ +.++.+|..+... ..++.|.++.+++.
T Consensus 49 la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~-~~---~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 49 LAASGFDIAITGIGDAEGVAPVIAELSG-LG-AR---VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHTTCEEEEEESCCHHHHHHHHHHHHH-TT-CC---EEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred HHHCCCeEEEEeCCCHHHHHHHHHHHHh-cC-Cc---EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 4445679999995 77777777777766 35 35 8999999875311 01478999999876
No 497
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=41.76 E-value=33 Score=21.25 Aligned_cols=75 Identities=12% Similarity=0.173 Sum_probs=46.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchH-HHHHhhC---CCCcE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVP-KEILAQL---KPGGR 88 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~-~~l~~~L---~pGGr 88 (156)
.+|.-+|-++...+..++.++. .|+. +.....++.+... ...++|.|+++...+... -.+.+.| .|+-.
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~-~g~~----vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ 77 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITK-AGYE----VAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAK 77 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHH-TTCE----EEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCC
T ss_pred ceEEEEcCcHHHHHHHHHHHhh-cCcE----EEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCe
Confidence 4789999999999999988887 3642 3333444433221 124689999998876543 1233322 35555
Q ss_pred EEEEec
Q psy14971 89 LVFHKG 94 (156)
Q Consensus 89 Lv~~~~ 94 (156)
+++...
T Consensus 78 ii~~s~ 83 (120)
T 1tmy_A 78 IIVCSA 83 (120)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 555544
No 498
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=41.72 E-value=22 Score=23.00 Aligned_cols=74 Identities=12% Similarity=0.200 Sum_probs=46.2
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCC---CC-CCCcCEEEEccCCCchHH-HHH---hhCCCC
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGH---AE-EGPYDIIHLGAACIEVPK-EIL---AQLKPG 86 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~---~~-~~~fD~I~i~~~~~~i~~-~l~---~~L~pG 86 (156)
.+|.-+|-++...+.-+..++. .|. . +. ...++.+.. .. ..+||+|+++...+.... .+. +...|.
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~-~g~-~---v~-~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~ 77 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEI-DGN-E---VL-TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPH 77 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTT
T ss_pred CEEEEEcCCHHHHHHHHHHHHh-CCc-e---EE-EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCC
Confidence 5899999999999999999987 464 2 33 333333221 11 357999999988765431 222 223456
Q ss_pred cEEEEEec
Q psy14971 87 GRLVFHKG 94 (156)
Q Consensus 87 GrLv~~~~ 94 (156)
-.+++...
T Consensus 78 ~~ii~ls~ 85 (143)
T 3jte_A 78 MAVIILTG 85 (143)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 66666554
No 499
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=41.34 E-value=16 Score=25.50 Aligned_cols=65 Identities=20% Similarity=0.278 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHhhhcCCCCccceEEEE----ccCCCCCCCCCCcCEEEEccCC----CchH----HHHHhhCCCCcEE
Q psy14971 22 HYMKVKSKNQNNKKLNIKQNRKSFKNVSV----KDGSKGHAEEGPYDIIHLGAAC----IEVP----KEILAQLKPGGRL 89 (156)
Q Consensus 22 ~~~~~~~~A~~~l~~~~g~~n~~~v~~~~----gD~~~~~~~~~~fD~I~i~~~~----~~i~----~~l~~~L~pGGrL 89 (156)
-+|+.++.++....+. +... +.... .|+.-.++ ...||.|++-... ..+| ..+.+.|||||.|
T Consensus 20 t~pe~le~~k~~~~~~-~~~~---~d~qmlDRLa~G~VsLp-~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L 94 (136)
T 2km1_A 20 TTPELVENTKAQAASK-KVKF---VDQFLINKLNDGSITLE-NAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSL 94 (136)
T ss_dssp TSHHHHHHHHHHHHHT-TEEE---EEEEEHHHHHHTCCCCC-SSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCE
T ss_pred CCHHHHHHHHHhhhcc-ccch---hhHHHHHHHhcCcccCC-cccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEE
Confidence 4688888888777651 1011 23333 23333233 4679999885533 2344 4567899999999
Q ss_pred EE
Q psy14971 90 VF 91 (156)
Q Consensus 90 v~ 91 (156)
..
T Consensus 95 ~g 96 (136)
T 2km1_A 95 IG 96 (136)
T ss_dssp EC
T ss_pred Ee
Confidence 96
No 500
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=41.29 E-value=46 Score=21.12 Aligned_cols=74 Identities=14% Similarity=0.245 Sum_probs=46.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhcCCCCccceEEEEccCCCCCC--CCCCcCEEEEccCCCchH-HHHHhhC---CCCcE
Q psy14971 15 ALVLILNHYMKVKSKNQNNKKLNIKQNRKSFKNVSVKDGSKGHA--EEGPYDIIHLGAACIEVP-KEILAQL---KPGGR 88 (156)
Q Consensus 15 g~V~avD~~~~~~~~A~~~l~~~~g~~n~~~v~~~~gD~~~~~~--~~~~fD~I~i~~~~~~i~-~~l~~~L---~pGGr 88 (156)
.+|.-+|-++...+..+..++. .|+ . +. ...++.+.+. ....+|+|+++...+... -.+.+.| .++-.
T Consensus 4 ~~Ilivdd~~~~~~~l~~~L~~-~g~-~---v~-~~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ 77 (132)
T 3crn_A 4 KRILIVDDDTAILDSTKQILEF-EGY-E---VE-IAATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMK 77 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHH-TTC-E---EE-EESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSE
T ss_pred cEEEEEeCCHHHHHHHHHHHHH-CCc-e---EE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCc
Confidence 5799999999999999998887 464 2 43 4444433221 135689999998876543 1222222 45556
Q ss_pred EEEEec
Q psy14971 89 LVFHKG 94 (156)
Q Consensus 89 Lv~~~~ 94 (156)
+++...
T Consensus 78 ii~~s~ 83 (132)
T 3crn_A 78 KIMVTG 83 (132)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 655544
Done!