Your job contains 1 sequence.
>psy14973
MVKRNQLISFQRFDREGTRGPAKKPQPAASKKGGASKDGESSGGPAGSWCLEGMRFVKVD
EFRGRPLISIREYYEKNGQLLPGKKGISLSATQWRKLLTLQDSVNSELDKY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14973
(111 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015299 - symbol:Ssb-c31a "Single stranded-binding... 206 1.1e-16 1
ASPGD|ASPL0000000236 - symbol:AN5806 species:162425 "Emer... 152 5.8e-11 1
POMBASE|SPAC16A10.02 - symbol:sub1 "transcription coactiv... 142 6.6e-10 1
ZFIN|ZDB-GENE-040718-209 - symbol:sub1b "SUB1 homolog b (... 132 7.6e-09 1
UNIPROTKB|Q5ZK63 - symbol:SUB1 "Activated RNA polymerase ... 129 1.6e-08 1
UNIPROTKB|G4NEJ8 - symbol:MGG_00780 "Uncharacterized prot... 128 2.0e-08 1
ZFIN|ZDB-GENE-050522-151 - symbol:sub1a "SUB1 homolog a (... 127 2.6e-08 1
TAIR|locus:2123416 - symbol:KELP species:3702 "Arabidopsi... 126 3.3e-08 1
UNIPROTKB|A7YWC6 - symbol:SUB1 "Uncharacterized protein" ... 123 6.8e-08 1
UNIPROTKB|E2R6X3 - symbol:SUB1 "Uncharacterized protein" ... 123 6.8e-08 1
UNIPROTKB|F6Y016 - symbol:LOC479283 "Uncharacterized prot... 123 6.8e-08 1
UNIPROTKB|J9P938 - symbol:J9P938 "Uncharacterized protein... 123 6.8e-08 1
UNIPROTKB|P53999 - symbol:SUB1 "Activated RNA polymerase ... 123 6.8e-08 1
UNIPROTKB|I3LQI3 - symbol:SUB1 "Uncharacterized protein" ... 123 6.8e-08 1
MGI|MGI:104811 - symbol:Sub1 "SUB1 homolog (S. cerevisiae... 123 6.8e-08 1
RGD|621582 - symbol:Sub1 "SUB1 homolog (S. cerevisiae)" s... 123 6.8e-08 1
UNIPROTKB|J9NRQ9 - symbol:SUB1 "Uncharacterized protein" ... 120 1.4e-07 1
TAIR|locus:2184747 - symbol:KIWI species:3702 "Arabidopsi... 119 1.8e-07 1
WB|WBGene00011743 - symbol:T13F2.2 species:6239 "Caenorha... 113 7.8e-07 1
UNIPROTKB|F1NKA2 - symbol:LOC777191 "Uncharacterized prot... 100 1.9e-05 1
DICTYBASE|DDB_G0275335 - symbol:DDB_G0275335 "ssDNA-bindi... 99 2.4e-05 1
CGD|CAL0000694 - symbol:orf19.5666 species:5476 "Candida ... 98 3.0e-05 1
UNIPROTKB|Q59UQ4 - symbol:CaO19.13111 "Putative uncharact... 98 3.0e-05 1
DICTYBASE|DDB_G0270054 - symbol:DDB_G0270054 "ssDNA-bindi... 94 8.1e-05 1
UNIPROTKB|F1S1P4 - symbol:F1S1P4 "Uncharacterized protein... 93 0.00010 1
SGD|S000004642 - symbol:SUB1 "Transcriptional coactivator... 94 0.00040 1
>FB|FBgn0015299 [details] [associations]
symbol:Ssb-c31a "Single stranded-binding protein c31A"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=ISS;NAS;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0003713 "transcription coactivator activity" evidence=ISS]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0005634
GO:GO:0045892 EMBL:AE014134 GO:GO:0006351 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:U18971 EMBL:BT023261 PIR:S66164
RefSeq:NP_477136.1 UniGene:Dm.2642 ProteinModelPortal:Q9VLR5
SMR:Q9VLR5 MINT:MINT-1003322 STRING:Q9VLR5 PaxDb:Q9VLR5
PRIDE:Q9VLR5 EnsemblMetazoa:FBtr0079590 GeneID:34120
KEGG:dme:Dmel_CG8396 CTD:34120 FlyBase:FBgn0015299
InParanoid:Q9VLR5 OMA:LDQWKIL OrthoDB:EOG4DZ0BW PhylomeDB:Q9VLR5
GenomeRNAi:34120 NextBio:786953 Bgee:Q9VLR5 GermOnline:CG8396
Uniprot:Q9VLR5
Length = 110
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 39/73 (53%), Positives = 53/73 (72%)
Query: 37 KDGESSGGPAGSWCLEGMRFVKVDEFRGRPLISIREYYEKNGQLLPGKKGISLSATQWRK 96
KD +G A SW LEG+R V+++EFRGR + IRE+Y+K GQ+LPGKKGISLS QW+K
Sbjct: 39 KDSGENG--ATSWTLEGLRQVRINEFRGRKSVDIREFYDKGGQILPGKKGISLSLIQWKK 96
Query: 97 LLTLQDSVNSELD 109
LL + + V ++
Sbjct: 97 LLEVAEEVTRAIE 109
>ASPGD|ASPL0000000236 [details] [associations]
symbol:AN5806 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355 GO:GO:0003677
EMBL:BN001301 GO:GO:0003713 EMBL:AACD01000100 eggNOG:NOG299238
Gene3D:2.30.31.10 SUPFAM:SSF54447 OrthoDB:EOG4WQ4C5
RefSeq:XP_663410.1 ProteinModelPortal:Q5B0X4
EnsemblFungi:CADANIAT00007241 GeneID:2871080 KEGG:ani:AN5806.2
HOGENOM:HOG000213471 OMA:LVNIREY Uniprot:Q5B0X4
Length = 168
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 40 ESSGGPAGSWCLEGMRFVKVDEFRGRPLISIREYYEKNGQLLPGKKGISLSATQWRKLLT 99
E S G W + MR V + FRG+ +++IREYYEK+G+ LPGKKGISL Q+ L+T
Sbjct: 49 EDSNGDI-YWEISKMRRVTISSFRGKTMVNIREYYEKDGEELPGKKGISLPIDQFSSLVT 107
Query: 100 LQDSVNSELDK 110
L + L +
Sbjct: 108 LLPEIEIVLQE 118
>POMBASE|SPAC16A10.02 [details] [associations]
symbol:sub1 "transcription coactivator PC4"
species:4896 "Schizosaccharomyces pombe" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
PomBase:SPAC16A10.02 GO:GO:0005634 EMBL:CU329670 GO:GO:0006351
GO:GO:0003713 GO:GO:0003690 GO:GO:0003697 GO:GO:0060261
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
OrthoDB:EOG4WQ4C5 PIR:T37767 RefSeq:NP_594042.1
ProteinModelPortal:P87294 STRING:P87294 EnsemblFungi:SPAC16A10.02.1
GeneID:2542309 KEGG:spo:SPAC16A10.02 NextBio:20803370
Uniprot:P87294
Length = 136
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 57 VKVDEFRGRPLISIREYYEKNGQLLPGKKGISLSATQWRKLLTLQDSVNSEL 108
+ + EFRG + IREYYEK+G +LPGKKGI+L+ +W+KL L V+ L
Sbjct: 40 ITLSEFRGTRYVHIREYYEKDGDMLPGKKGIALNINEWKKLKQLIHEVDDSL 91
>ZFIN|ZDB-GENE-040718-209 [details] [associations]
symbol:sub1b "SUB1 homolog b (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
ZFIN:ZDB-GENE-040718-209 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 EMBL:BX470118 GeneTree:ENSGT00390000008802
HOVERGEN:HBG028243 OMA:LDQWKIL OrthoDB:EOG4NS3D2 EMBL:BC076294
IPI:IPI00505413 RefSeq:NP_001002505.1 UniGene:Dr.13991 SMR:Q6DGP6
Ensembl:ENSDART00000011229 GeneID:436778 KEGG:dre:436778 CTD:436778
InParanoid:Q6DGP6 NextBio:20831213 Uniprot:Q6DGP6
Length = 124
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 37 KDGESSGGPAGSWCLE---------G-MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKK 85
K GESS P+GS E G +R+V V +F+G+ LI IREY+ ++ G++ PGKK
Sbjct: 40 KSGESSK-PSGSAKTEKSSDNMFQIGKLRYVSVRDFKGKVLIDIREYWMDQAGEMKPGKK 98
Query: 86 GISLSATQWRKLLTLQDSVNSELDKY 111
GISL+ QW +L ++ + +Y
Sbjct: 99 GISLNPEQWSQLKEQMSDIDDAIKRY 124
>UNIPROTKB|Q5ZK63 [details] [associations]
symbol:SUB1 "Activated RNA polymerase II transcriptional
coactivator p15" species:9031 "Gallus gallus" [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 EMBL:AJ720221 IPI:IPI00570734
RefSeq:NP_001008479.1 UniGene:Gga.11479 HSSP:P53999
ProteinModelPortal:Q5ZK63 SMR:Q5ZK63 STRING:Q5ZK63 PRIDE:Q5ZK63
GeneID:427425 KEGG:gga:427425 CTD:10923 eggNOG:NOG280527
HOVERGEN:HBG028243 NextBio:20828685 Uniprot:Q5ZK63
Length = 126
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 37 KDGESSGGPAGS----------WCLEGMRFVKVDEFRGRPLISIREYY-EKNGQLLPGKK 85
K GESS G A S + + MR+V V +F+G+ LI IREY+ ++ G++ PG+K
Sbjct: 41 KTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRK 100
Query: 86 GISLSATQWRKL 97
GISL+ QW +L
Sbjct: 101 GISLNPEQWNQL 112
>UNIPROTKB|G4NEJ8 [details] [associations]
symbol:MGG_00780 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0006355 EMBL:CM001235 GO:GO:0003677 GO:GO:0003713
Gene3D:2.30.31.10 SUPFAM:SSF54447 RefSeq:XP_003718212.1 PDB:4AGH
PDBsum:4AGH ProteinModelPortal:G4NEJ8 EnsemblFungi:MGG_00780T0
GeneID:2674441 KEGG:mgr:MGG_00780 Uniprot:G4NEJ8
Length = 162
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 40 ESSGGPAGSWCLEGMRFVKVDEFRGRPLISIREYYEKNGQLLPGKKGISLSATQWRKLLT 99
++ G P W + R V + +F+ I+IREYYE G++ PGKKGI L+ Q+ L
Sbjct: 46 DAEGNPF--WEISDKRRVGISQFKKMDFINIREYYEAGGEMKPGKKGIGLTVDQYTAFLK 103
Query: 100 LQDSVNSEL 108
++N+EL
Sbjct: 104 AIPAINAEL 112
>ZFIN|ZDB-GENE-050522-151 [details] [associations]
symbol:sub1a "SUB1 homolog a (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
ZFIN:ZDB-GENE-050522-151 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:BX664706
EMBL:BC095096 IPI:IPI00503863 RefSeq:NP_001018376.1
UniGene:Dr.84297 SMR:Q504B1 STRING:Q504B1
Ensembl:ENSDART00000075485 Ensembl:ENSDART00000143848 GeneID:553561
KEGG:dre:553561 CTD:553561 InParanoid:Q504B1 NextBio:20880301
Uniprot:Q504B1
Length = 123
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKLLTLQDSVNSELD 109
MR+V V +F+G+ LI IREY+ ++ G++ PG+KGISL+ QW +L ++ + SE+D
Sbjct: 65 MRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQL---KEQI-SEID 117
>TAIR|locus:2123416 [details] [associations]
symbol:KELP species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003173 InterPro:IPR009044
InterPro:IPR009057 Pfam:PF02229 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 GO:GO:0003713 InterPro:IPR014876 Pfam:PF08766
EMBL:AL161518 EMBL:AF080118 EMBL:AL049525 EMBL:AF053303
EMBL:AY085896 EMBL:BT005847 IPI:IPI00522129 PIR:T52114
RefSeq:NP_001078372.1 RefSeq:NP_192830.1 UniGene:At.21693
ProteinModelPortal:O65155 SMR:O65155 IntAct:O65155 PaxDb:O65155
PRIDE:O65155 DNASU:826690 EnsemblPlants:AT4G10920.1
EnsemblPlants:AT4G10920.2 GeneID:826690 KEGG:ath:AT4G10920
GeneFarm:2402 TAIR:At4g10920 eggNOG:NOG299238 HOGENOM:HOG000238208
InParanoid:O65155 OMA:LVSIREY PhylomeDB:O65155
ProtClustDB:CLSN2686069 Genevestigator:O65155 GermOnline:AT4G10920
Gene3D:2.30.31.10 InterPro:IPR017415 PIRSF:PIRSF038156
SUPFAM:SSF54447 Uniprot:O65155
Length = 165
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 51 LEGMRFVKVDEFRGRPLISIREYYEKNGQLLPGKKGISLSATQW 94
L R V + EF+G+ L+SIREYY+K+G+ LP KGISL+ QW
Sbjct: 101 LSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQW 144
>UNIPROTKB|A7YWC6 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802 CTD:10923
HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:DAAA02050690
EMBL:BC134490 IPI:IPI00695331 RefSeq:NP_001098877.1
UniGene:Bt.23529 SMR:A7YWC6 STRING:A7YWC6
Ensembl:ENSBTAT00000029284 GeneID:533984 KEGG:bta:533984
InParanoid:A7YWC6 NextBio:20876218 Uniprot:A7YWC6
Length = 127
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 69 MRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLNPEQWSQL 113
>UNIPROTKB|E2R6X3 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10
SUPFAM:SSF54447 RefSeq:XP_536425.3 Ensembl:ENSCAFT00000029964
GeneID:479283 KEGG:cfa:479283 NextBio:20854490 Uniprot:E2R6X3
Length = 127
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 69 MRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQL 113
>UNIPROTKB|F6Y016 [details] [associations]
symbol:LOC479283 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:QWNQLKD Ensembl:ENSCAFT00000029964
EMBL:AAEX03003186 EMBL:AAEX03003187 Uniprot:F6Y016
Length = 144
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 86 MRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQL 130
>UNIPROTKB|J9P938 [details] [associations]
symbol:J9P938 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:AAEX03002980
Ensembl:ENSCAFT00000026464 OMA:VDIREHY Uniprot:J9P938
Length = 132
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 74 MRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQL 118
>UNIPROTKB|P53999 [details] [associations]
symbol:SUB1 "Activated RNA polymerase II transcriptional
coactivator p15" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
SUPFAM:SSF54447 CTD:10923 HOVERGEN:HBG028243 EMBL:X79805
EMBL:U12979 EMBL:BC009610 EMBL:BC010537 EMBL:BC018189 EMBL:BC022339
IPI:IPI00221222 PIR:A54670 RefSeq:NP_006704.3 UniGene:Hs.229641
PDB:1PCF PDB:2C62 PDB:2PHE PDBsum:1PCF PDBsum:2C62 PDBsum:2PHE
ProteinModelPortal:P53999 SMR:P53999 DIP:DIP-29044N IntAct:P53999
MINT:MINT-138673 STRING:P53999 PhosphoSite:P53999 DMDM:1709514
PaxDb:P53999 PeptideAtlas:P53999 PRIDE:P53999
Ensembl:ENST00000265073 Ensembl:ENST00000502897
Ensembl:ENST00000506237 Ensembl:ENST00000512913
Ensembl:ENST00000515355 GeneID:10923 KEGG:hsa:10923 UCSC:uc003jhs.2
GeneCards:GC05P032622 HGNC:HGNC:19985 HPA:CAB015351 HPA:HPA001311
MIM:600503 neXtProt:NX_P53999 PharmGKB:PA142670858
InParanoid:P53999 OMA:QWNQLKD OrthoDB:EOG4NS3D2 PhylomeDB:P53999
ChiTaRS:SUB1 EvolutionaryTrace:P53999 GenomeRNAi:10923
NextBio:41499 ArrayExpress:P53999 Bgee:P53999 CleanEx:HS_SUB1
Genevestigator:P53999 GermOnline:ENSG00000113387 Uniprot:P53999
Length = 127
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 69 MRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQL 113
>UNIPROTKB|I3LQI3 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:QWNQLKD EMBL:FP085384
Ensembl:ENSSSCT00000023763 Uniprot:I3LQI3
Length = 134
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 76 MRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQL 120
>MGI|MGI:104811 [details] [associations]
symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 MGI:MGI:104811
GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
SUPFAM:SSF54447 HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2
ChiTaRS:SUB1 EMBL:J03750 EMBL:AK048371 EMBL:AK049260 EMBL:AK132021
EMBL:AK146335 EMBL:AK151734 EMBL:AK154114 EMBL:BC010967
IPI:IPI00225633 PIR:A28084 RefSeq:NP_035424.1 UniGene:Mm.41746
ProteinModelPortal:P11031 SMR:P11031 STRING:P11031
PhosphoSite:P11031 PaxDb:P11031 PRIDE:P11031
Ensembl:ENSMUST00000022816 Ensembl:ENSMUST00000110504 GeneID:20024
KEGG:mmu:20024 UCSC:uc007vhj.1 InParanoid:P11031 NextBio:297547
Bgee:P11031 CleanEx:MM_SUB1 Genevestigator:P11031
GermOnline:ENSMUSG00000022205 Uniprot:P11031
Length = 127
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 69 MRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQL 113
>RGD|621582 [details] [associations]
symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0003697 "single-stranded DNA binding"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] InterPro:IPR003173 InterPro:IPR009044
Pfam:PF02229 RGD:621582 GO:GO:0005634 GO:GO:0005730 GO:GO:0006357
GO:GO:0006351 GO:GO:0005667 GO:GO:0003713 GO:GO:0003697
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD
OrthoDB:EOG4NS3D2 EMBL:BC088346 EMBL:K02816 IPI:IPI00208123
PIR:A23063 RefSeq:NP_001009618.1 UniGene:Rn.231328 UniGene:Rn.8706
ProteinModelPortal:Q63396 SMR:Q63396 IntAct:Q63396
MINT:MINT-4598677 STRING:Q63396 PRIDE:Q63396
Ensembl:ENSRNOT00000015443 GeneID:192269 KEGG:rno:192269
InParanoid:Q63396 NextBio:622964 Genevestigator:Q63396
GermOnline:ENSRNOG00000011558 Uniprot:Q63396
Length = 127
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR+V V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 69 MRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQL 113
>UNIPROTKB|J9NRQ9 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:IFKITRT EMBL:AAEX03016493
Ensembl:ENSCAFT00000037797 Uniprot:J9NRQ9
Length = 125
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
MR++ V +F+G+ LI IREY+ + G++ PG+KGISL+ QW +L
Sbjct: 67 MRYLSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQL 111
>TAIR|locus:2184747 [details] [associations]
symbol:KIWI species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AL391712 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447 EMBL:AF053302
EMBL:BT004745 IPI:IPI00531083 PIR:T52113 RefSeq:NP_196487.1
UniGene:At.10039 ProteinModelPortal:O65154 SMR:O65154 IntAct:O65154
STRING:O65154 PaxDb:O65154 PRIDE:O65154 EnsemblPlants:AT5G09250.1
GeneID:830784 KEGG:ath:AT5G09250 TAIR:At5g09250
HOGENOM:HOG000239157 InParanoid:O65154 OMA:WIDIREF PhylomeDB:O65154
ProtClustDB:CLSN2916867 Genevestigator:O65154 GermOnline:AT5G09250
Uniprot:O65154
Length = 107
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 55 RFVKVDEFRGRPLISIREYYEKNGQLLPGKKGISLSATQWRKLLTLQDSVNSEL 108
R V V + G+ I IRE+Y K+G+ LPGKKGISLS QW L + + L
Sbjct: 50 RRVSVRNWNGKIWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKAL 103
>WB|WBGene00011743 [details] [associations]
symbol:T13F2.2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003713 EMBL:Z81122
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802 PIR:T24876
RefSeq:NP_501750.1 ProteinModelPortal:Q94045 SMR:Q94045
STRING:Q94045 PaxDb:Q94045 EnsemblMetazoa:T13F2.2.1
EnsemblMetazoa:T13F2.2.2 GeneID:188475 KEGG:cel:CELE_T13F2.2
UCSC:T13F2.2.1 CTD:188475 WormBase:T13F2.2 InParanoid:Q94045
OMA:LSTEQWE NextBio:938940 Uniprot:Q94045
Length = 124
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 54 MRFVKVDEFRGRPLISIREYY-EKNGQ-LLPGKKGISLSATQWRKLLTLQDSVNSELDK 110
+R+ V +F+G+ ++IREYY +++ Q ++P +KGISLS QW L +D + E+DK
Sbjct: 68 LRYATVSKFKGKEYVNIREYYIDRDSQKMMPSRKGISLSKAQWANL---KDLI-PEIDK 122
>UNIPROTKB|F1NKA2 [details] [associations]
symbol:LOC777191 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 IPI:IPI00570734 OMA:QWNQLKD
EMBL:AADN02060500 EMBL:AADN02060501 EMBL:AADN02060502
Ensembl:ENSGALT00000039243 Uniprot:F1NKA2
Length = 124
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 37 KDGESSGGPAGS----------WCLEGMRFVKVDEFRGRPLISIREYYEKNGQLLPGKKG 86
K GESS G A S + + MR+V V +F+G+ LI +K G++ PG+KG
Sbjct: 46 KTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLI------DKEGEMKPGRKG 99
Query: 87 ISLSATQWRKL 97
ISL+ QW +L
Sbjct: 100 ISLNPEQWNQL 110
>DICTYBASE|DDB_G0275335 [details] [associations]
symbol:DDB_G0275335 "ssDNA-binding transcriptional
regulator" species:44689 "Dictyostelium discoideum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA;ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0003697 "single-stranded DNA binding" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 dictyBase:DDB_G0275335
GO:GO:0006357 EMBL:AAFI02000013 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 InterPro:IPR017415
PIRSF:PIRSF038156 SUPFAM:SSF54447 RefSeq:XP_643662.1
ProteinModelPortal:Q553Q8 EnsemblProtists:DDB0216410 GeneID:8619927
KEGG:ddi:DDB_G0275335 InParanoid:Q553Q8 OMA:KEMRSKS
ProtClustDB:CLSZ2430970 Uniprot:Q553Q8
Length = 141
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 36 SKDGESSGGPAGSWCLEGMRFVKVDEFRGRPLISIREYYE-KNGQLLPGKKGISLSATQW 94
S SS S+ L R + F+G I IRE++E K+G+L P KGISL+ Q+
Sbjct: 64 SSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQF 123
Query: 95 RKLLTLQDSV 104
+L D++
Sbjct: 124 MVILENGDTI 133
>CGD|CAL0000694 [details] [associations]
symbol:orf19.5666 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0045945 "positive regulation
of transcription from RNA polymerase III promoter" evidence=IEA]
[GO:0006972 "hyperosmotic response" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0043618 "regulation of
transcription from RNA polymerase II promoter in response to
stress" evidence=IEA] [GO:0070898 "RNA polymerase III
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 CGD:CAL0000694
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 EMBL:AACQ01000129
EMBL:AACQ01000128 Gene3D:2.30.31.10 SUPFAM:SSF54447
RefSeq:XP_713347.1 RefSeq:XP_713394.1 ProteinModelPortal:Q59UQ4
GeneID:3644958 GeneID:3645016 KEGG:cal:CaO19.13111
KEGG:cal:CaO19.5666 eggNOG:NOG275260 HOGENOM:HOG000248055
Uniprot:Q59UQ4
Length = 146
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 51 LEGMRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKLLTLQDSVNSELD 109
L+ + V V ++ L+ IRE+Y +++G PGKKGISL+ + KLL + + + LD
Sbjct: 19 LDSKKQVTVRKYNNVNLVDIREFYTDRDGVKRPGKKGISLTEDTYYKLLEATNKIQNALD 78
>UNIPROTKB|Q59UQ4 [details] [associations]
symbol:CaO19.13111 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 CGD:CAL0000694 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 EMBL:AACQ01000129 EMBL:AACQ01000128
Gene3D:2.30.31.10 SUPFAM:SSF54447 RefSeq:XP_713347.1
RefSeq:XP_713394.1 ProteinModelPortal:Q59UQ4 GeneID:3644958
GeneID:3645016 KEGG:cal:CaO19.13111 KEGG:cal:CaO19.5666
eggNOG:NOG275260 HOGENOM:HOG000248055 Uniprot:Q59UQ4
Length = 146
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 51 LEGMRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKLLTLQDSVNSELD 109
L+ + V V ++ L+ IRE+Y +++G PGKKGISL+ + KLL + + + LD
Sbjct: 19 LDSKKQVTVRKYNNVNLVDIREFYTDRDGVKRPGKKGISLTEDTYYKLLEATNKIQNALD 78
>DICTYBASE|DDB_G0270054 [details] [associations]
symbol:DDB_G0270054 "ssDNA-binding transcriptional
regulator" species:44689 "Dictyostelium discoideum" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA;ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0003697 "single-stranded DNA binding" evidence=ISS]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
dictyBase:DDB_G0270054 EMBL:AAFI02000005 GO:GO:0006357
GO:GO:0005667 GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238
Gene3D:2.30.31.10 InterPro:IPR017415 PIRSF:PIRSF038156
SUPFAM:SSF54447 ProtClustDB:CLSZ2430970 RefSeq:XP_646504.1
ProteinModelPortal:Q55CH7 EnsemblProtists:DDB0220621 GeneID:8617464
KEGG:ddi:DDB_G0270054 InParanoid:Q55CH7 OMA:IFKITRT Uniprot:Q55CH7
Length = 129
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 36 SKDGESSGGPAGSWCLEGMRFVKVDEFRGRPLISIREYYE-KNGQLLPGKKGISLSATQW 94
S SS S+ L R + F+G I IRE++E K+G+L P KGISL+ Q
Sbjct: 52 SSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQL 111
Query: 95 RKLLTLQDSV 104
+L D++
Sbjct: 112 VVILENGDTI 121
>UNIPROTKB|F1S1P4 [details] [associations]
symbol:F1S1P4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:CU914264 EMBL:FP102115
Ensembl:ENSSSCT00000013632 Ensembl:ENSSSCT00000017102
Uniprot:F1S1P4
Length = 123
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 41 SSGGPAGSWCLEGMRFVKVDEFRGRPLISIREYY-EKNGQLLPGKKGISLSATQWRKL 97
SS A + + MR+V V +F+ + LI IREY + ++ PG KGISL+ Q +L
Sbjct: 52 SSSRDANMFQIGKMRYVSVRDFKEKVLIDIREYQMDPEHEMKPGTKGISLNPEQQNQL 109
>SGD|S000004642 [details] [associations]
symbol:SUB1 "Transcriptional coactivator" species:4932
"Saccharomyces cerevisiae" [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter"
evidence=IGI;IDA;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IC]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISS;IPI] [GO:0003713
"transcription coactivator activity" evidence=IEA;IGI;ISS;IPI]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IGI;IMP;IDA]
[GO:0006972 "hyperosmotic response" evidence=IGI] [GO:0070898 "RNA
polymerase III transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
SGD:S000004642 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
GO:GO:0006972 EMBL:BK006946 GO:GO:0003713 GO:GO:0045945 EMBL:Z48502
GO:GO:0043618 GO:GO:0032968 GO:GO:0006369 eggNOG:NOG299238
Gene3D:2.30.31.10 SUPFAM:SSF54447 GO:GO:0070898 PIR:S52888
RefSeq:NP_013753.1 ProteinModelPortal:P54000 SMR:P54000
DIP:DIP-4696N IntAct:P54000 MINT:MINT-540355 STRING:P54000
PaxDb:P54000 EnsemblFungi:YMR039C GeneID:855055 KEGG:sce:YMR039C
CYGD:YMR039c GeneTree:ENSGT00390000008802 HOGENOM:HOG000000752
OMA:EREANAT OrthoDB:EOG4WQ4C5 NextBio:978301 Genevestigator:P54000
GermOnline:YMR039C Uniprot:P54000
Length = 292
Score = 94 (38.1 bits), Expect = 0.00040, P = 0.00040
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 57 VKVDEFRGRPLISIREYY--EKNGQLLPGKKGISLSATQWRKLLTLQDSVNSEL 108
V V +FR LI IREYY G++ PGKKGISL+ + +LL + +++ L
Sbjct: 49 VTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNIDEAL 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 111 95 0.00091 102 3 11 22 0.40 30
29 0.43 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 529 (56 KB)
Total size of DFA: 108 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.10u 0.11s 9.21t Elapsed: 00:00:04
Total cpu time: 9.10u 0.11s 9.21t Elapsed: 00:00:04
Start: Thu Aug 15 12:38:23 2013 End: Thu Aug 15 12:38:27 2013