BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14977
(469 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80VW5|WHRN_MOUSE Whirlin OS=Mus musculus GN=Dfnb31 PE=1 SV=3
Length = 918
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 127/248 (51%), Gaps = 42/248 (16%)
Query: 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIP 263
VR +++ R++ A+ G G ++GG+ + GVG+Y+S VE GS+AE+ GLR GD IL+VN
Sbjct: 139 VRLVSLRRAK-AHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKS 196
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS-IPPQAPRNHPLPPPPAWTMRQ 322
++H EA+K LK +++L ++V S IP NH
Sbjct: 197 LARVTHAEAVKA-----------LKGSKKLVLSVYSAGRIPGGYVTNH------------ 233
Query: 323 AYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTV------RKVELNIE 376
Y+W+D QGR SPP +P P R R S + +KV L +
Sbjct: 234 IYTWVDPQGRSTSPPSS-------LPQPHGSTLRQREDDRRSTLHLLQSGDEKKVNLVLG 286
Query: 377 PGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFL-ILSDHDKDF 435
G+SLGL IRGG EY LGI+ITGVD S AE +GL V L + FL IL HD+
Sbjct: 287 DGRSLGLTIRGGAEYGLGIYITGVDPGSEAESSGLKVGDQILEVNGRSFLNIL--HDEAV 344
Query: 436 DTVISFSH 443
+ S H
Sbjct: 345 KLLKSSRH 352
Score = 39.3 bits (90), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 76/191 (39%), Gaps = 11/191 (5%)
Query: 98 PPPPPVPLPQPPKPRGTYLGTNGSSYRTQPSSTEYRSNSPSNNTSSSYRNTSSHSHGTKK 157
PPP P P ++ ++P E R+ P T+S+ S +
Sbjct: 715 PPPSPSEHPDAVGANQHFVLVEVHRPDSEPDVNEVRA-LPQTRTASTLSQLSDSGQTLSE 773
Query: 158 GALSPEQVLKMLTSGGGGKKSAEGSEEHHHHPRHRRLT-----PPDIDQLPVRTINMNRS 212
+ + TSG G + ++ ++ PR R PP + + P T+ R
Sbjct: 774 DSGVDAGETEASTSGRGRQTASAKNKNGKEQPRTERTAEGANKPPGLLE-PTSTLVRVRK 832
Query: 213 QDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEE 271
A GI ++GGAN I ++ G A G L+ G IL+VNG G H+E
Sbjct: 833 SAAT--LGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGQTLRGKEHKE 890
Query: 272 ALKMCFFEGYK 282
A ++ E +K
Sbjct: 891 AARI-IAEAFK 900
>sp|Q9P202|WHRN_HUMAN Whirlin OS=Homo sapiens GN=DFNB31 PE=1 SV=3
Length = 907
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 126/247 (51%), Gaps = 40/247 (16%)
Query: 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIP 263
VR +++ R++ A+ G G ++GG+ + GVG+Y+S VE GS+AE+ GLR GD IL+VN
Sbjct: 138 VRLVSLRRAK-AHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKS 195
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS-IPPQAPRNHPLPPPPAWTMRQ 322
++H EA+K LK +++L ++V S IP NH
Sbjct: 196 LARVTHAEAVKA-----------LKGSKKLVLSVYSAGRIPGGYVTNH------------ 232
Query: 323 AYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTV------RKVELNIE 376
Y+W+D QGR SPP +P P R R S + +KV L +
Sbjct: 233 IYTWVDPQGRSISPPSG-------LPQPHGGALRQQEGDRRSTLHLLQGGDEKKVNLVLG 285
Query: 377 PGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFD 436
G+SLGL IRGG EY LGI+ITGVD S AE +GL V L + FL + HD+
Sbjct: 286 DGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNIL-HDEAVR 344
Query: 437 TVISFSH 443
+ S H
Sbjct: 345 LLKSSRH 351
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 12/88 (13%)
Query: 219 FGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFF 278
G+ ++GGA G+G+YI+ V+ GS AE +GL+ GD IL+VNG F I H+EA++
Sbjct: 290 LGLTIRGGAEY-GLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVR---- 344
Query: 279 EGYKEGQMLKSNRELSMTVRSPSIPPQA 306
+LKS+R L +TV+ P+A
Sbjct: 345 -------LLKSSRHLILTVKDVGRLPRA 365
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 206 TINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPF 264
T + R + + GI ++GGAN I ++ G A G L+ G IL+VNG+
Sbjct: 813 TSTLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTL 872
Query: 265 TGISHEEALKMCFFEGYK 282
G H EA ++ E +K
Sbjct: 873 RGKEHREAARI-IAEAFK 889
>sp|Q810W9|WHRN_RAT Whirlin OS=Rattus norvegicus GN=Dfnb31 PE=1 SV=1
Length = 920
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 125/247 (50%), Gaps = 42/247 (17%)
Query: 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIP 263
VR +++ R++ A+ G G ++GG+ + GVG+Y+S VE GS+AE+ GLR GD IL+VN
Sbjct: 139 VRLVSLRRAK-AHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKS 196
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS-IPPQAPRNHPLPPPPAWTMRQ 322
++H EA+K LK +++L ++V S IP NH
Sbjct: 197 LARVTHAEAVKA-----------LKGSKKLVLSVYSAGRIPGGYVTNH------------ 233
Query: 323 AYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTV------RKVELNIE 376
Y+W+D QGR SPP P R + R S + +KV L +
Sbjct: 234 IYTWVDPQGRSTSPPSSL---------PHGSTLRQHEDDRRSALHLLQSGDEKKVNLVLG 284
Query: 377 PGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFD 436
G+SLGL IRGG EY LGI+ITGVD S AE +GL V L + FL + HD+
Sbjct: 285 DGRSLGLTIRGGAEYGLGIYITGVDPGSEAESSGLKVGDQILEVNGRSFLSIL-HDEAVK 343
Query: 437 TVISFSH 443
+ S H
Sbjct: 344 LLKSSRH 350
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 206 TINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPF 264
T + R + + GI ++GGAN I ++ G A G L+ G IL+VNG
Sbjct: 826 TSTLIRVRKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGQTL 885
Query: 265 TGISHEEALKMCFFEGYK 282
G H EA ++ E +K
Sbjct: 886 RGKEHREAARV-IAEAFK 902
>sp|Q9H5P4|PDZD7_HUMAN PDZ domain-containing protein 7 OS=Homo sapiens GN=PDZD7 PE=1 SV=1
Length = 517
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 105/243 (43%), Gaps = 54/243 (22%)
Query: 219 FGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFF 278
G V+GG+ + G+G+++S+VEEGS AERAGL GD I +VNG+ + A+K
Sbjct: 97 LGFSVRGGSEH-GLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVK---- 151
Query: 279 EGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPL 338
+L S+ L M VR P + ++ +W+D R
Sbjct: 152 -------VLTSSSRLHMMVRRMGRVPGIKFS-----------KEKTTWVDVVNR------ 187
Query: 339 DYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVE--LNIEPGQSLGLMIRGGVEYNLGIF 396
R V+ P S SS+D VR++ LG IRGG E+ LGI+
Sbjct: 188 ---RLVVEKCGSTP-------SDTSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIY 237
Query: 397 ITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSHEQTSPSMYGVQAT 456
++ VD +AE G+ V +L+ + FD + SH Q + G
Sbjct: 238 VSKVDHGGLAEENGIKVGD----------QVLAANGVRFDDI---SHSQAVEVLKGQTHI 284
Query: 457 LLS 459
+L+
Sbjct: 285 MLT 287
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 24/125 (19%)
Query: 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPF 264
R +++ + D + G ++GG G+G+Y+S+V+ G +AE G++ GD +L NG+ F
Sbjct: 209 RIVHLYTTSD-DFCLGFNIRGG-KEFGLGIYVSKVDHGGLAEENGIKVGDQVLAANGVRF 266
Query: 265 TGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAY 324
ISH +A+ ++LK + +T++ P M Y
Sbjct: 267 DDISHSQAV-----------EVLKGQTHIMLTIKETGRYPAYKE-----------MVSEY 304
Query: 325 SWIDR 329
W+DR
Sbjct: 305 CWLDR 309
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 366 DTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLV 413
D + V + P LG +RGG E+ LGIF++ V++ S AERAGL V
Sbjct: 82 DIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCV 129
>sp|Q5RBI7|PDZD7_PONAB PDZ domain-containing protein 7 OS=Pongo abelii GN=PDZD7 PE=2 SV=1
Length = 528
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 104/243 (42%), Gaps = 54/243 (22%)
Query: 219 FGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFF 278
G V+GG+ + G+G+++S+VEEGS AERAGL GD I +VNG+ + A+K+
Sbjct: 97 LGFSVRGGSEH-GLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKV--- 152
Query: 279 EGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPL 338
L + L M VR P + ++ +W+D R
Sbjct: 153 --------LTGSSRLHMMVRRMGRVPGIKFS-----------KEKTTWVDVVNR------ 187
Query: 339 DYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVE--LNIEPGQSLGLMIRGGVEYNLGIF 396
R V+ P S SS+D +R++ LG IRGG E+ LGI+
Sbjct: 188 ---RLVVEKCSSTP-------SDTSSEDGIRRIVHLYTTSDDFCLGFNIRGGKEFGLGIY 237
Query: 397 ITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSHEQTSPSMYGVQAT 456
++ VD +AE G+ V +L+ + FD + SH Q + G
Sbjct: 238 VSKVDHGGLAEENGIKVGD----------QVLAANGVRFDDI---SHSQAVEVLKGQTHI 284
Query: 457 LLS 459
+L+
Sbjct: 285 MLT 287
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 24/125 (19%)
Query: 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPF 264
R +++ + D + G ++GG G+G+Y+S+V+ G +AE G++ GD +L NG+ F
Sbjct: 209 RIVHLYTTSD-DFCLGFNIRGG-KEFGLGIYVSKVDHGGLAEENGIKVGDQVLAANGVRF 266
Query: 265 TGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAY 324
ISH +A+ ++LK + +T++ P M Y
Sbjct: 267 DDISHSQAV-----------EVLKGQTHIMLTIKETGRYPAYKE-----------MVSEY 304
Query: 325 SWIDR 329
W+DR
Sbjct: 305 CWLDR 309
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 366 DTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLV 413
D + V + P LG +RGG E+ LGIF++ V++ S AERAGL V
Sbjct: 82 DIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCV 129
>sp|A1A5G4|MAGI3_XENTR Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Xenopus tropicalis GN=magi3 PE=2 SV=1
Length = 1107
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 95/237 (40%), Gaps = 35/237 (14%)
Query: 185 HHHHPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVY---ISRVEE 241
H+ PR R+ I +LP ++ + N GFG + N P GV I RV E
Sbjct: 830 HNGSPRLNRIEVSAIPKLPAEAYDVILQRKDNEGFGFVILTSKNKPPPGVIPHKIGRVIE 889
Query: 242 GSIAERA-GLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSP 300
GS A+R L+ GD I VNG +SH+ +++ G + + E R P
Sbjct: 890 GSPADRCRKLKVGDRISAVNGQSIVELSHDNIVQLIKDAGNTVTLTVIAEEEH----RGP 945
Query: 301 SIPPQAPRNHPLP-------PPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPP 353
+ R P P P + YSW D + C P L
Sbjct: 946 PSGSNSARQSPAPQHRPMGQTQPTYGTLDRYSWSDHKAD-CGPAL--------------- 989
Query: 354 PPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG 410
P ++ A S VEL P + G +RGG EYN+G+FI + +D A + G
Sbjct: 990 -PAGSWQALSV--GCYPVELERGP-RGFGFSLRGGKEYNMGLFILRLAEDGPAIKDG 1042
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 196 PPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGD 254
PP+ L V R Q++ GFG V GG + P +YI + AE+ G LR D
Sbjct: 720 PPNTKDLDV----FLRKQES--GFGFRVLGG-DGPDQAIYIGAIIPLGAAEKDGRLRAAD 772
Query: 255 SILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMT 296
++ ++G+P G SH++ L + +L R++ T
Sbjct: 773 ELICIDGVPVKGKSHKQVLDLMTNAARNGHVLLTVRRQIYYT 814
Score = 38.9 bits (89), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276
GFG ++GG +G++I R+ E A + G + GD I+++N P GI+H A+++
Sbjct: 1012 GFGFSLRGGKEY-NMGLFILRLAEDGPAIKDGRIHVGDQIVEINNEPTQGITHTRAIELI 1070
Query: 277 FFEGYKEGQMLK 288
G K +L+
Sbjct: 1071 QAGGSKVLLLLR 1082
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 186 HHHPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRV-EEGSI 244
H P + + T D QL ++ + + A GFG + GG + P + + V ++G
Sbjct: 386 HQEPENSQFTR-DPSQLKGALLHTSLKKSA-MGFGFTIIGG-DRPDEFLQVKNVLKDGPA 442
Query: 245 AERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP 304
A+ + PGD I+ +NG G +H E ++M Q++ N+ ++MT+
Sbjct: 443 AQDGKIAPGDVIVDINGTCVLGHTHAEVVQMF--------QLIPINQYVNMTL------- 487
Query: 305 QAPRNHPLP 313
R +PLP
Sbjct: 488 --CRGYPLP 494
>sp|Q5EBL8|PDZ11_HUMAN PDZ domain-containing protein 11 OS=Homo sapiens GN=PDZD11 PE=1
SV=2
Length = 140
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 18/114 (15%)
Query: 189 PRHRRLTPPD----IDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSI 244
P H R+ PD + Q RTI + + A GF I +GG + +G++IS+V S
Sbjct: 26 PPHERVHHPDYNNELTQFLPRTITLKKPPGAQLGFNI--RGGKAS-QLGIFISKVIPDSD 82
Query: 245 AERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298
A RAGL+ GD +L VN + F I H +A+ ++LK+ RE+SM VR
Sbjct: 83 AHRAGLQEGDQVLAVNDVDFQDIEHSKAV-----------EILKTAREISMRVR 125
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 354 PPRW----------NYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKD 403
PP W +Y+ ++ R + L PG LG IRGG LGIFI+ V D
Sbjct: 21 PPAWIPPHERVHHPDYNNELTQFLPRTITLKKPPGAQLGFNIRGGKASQLGIFISKVIPD 80
Query: 404 SVAERAGL 411
S A RAGL
Sbjct: 81 SDAHRAGL 88
>sp|Q5ZIK2|PDZ11_CHICK PDZ domain-containing protein 11 OS=Gallus gallus GN=PDZD11 PE=2
SV=1
Length = 140
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 18/114 (15%)
Query: 189 PRHRRLTPPD----IDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSI 244
P H R+ PD + Q RT+ + + A GF I +GG + +G++IS+V S
Sbjct: 26 PPHERVYHPDYNNELTQFLPRTVVLKKPPGAQLGFNI--RGGKAS-QLGIFISKVIPDSD 82
Query: 245 AERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298
A RAGL+ GD +L VN + F I H +A+ ++LK+ RE++M VR
Sbjct: 83 AHRAGLQEGDQVLSVNDVDFQDIEHSKAV-----------EILKTAREITMRVR 125
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 349 PPPPPPPRW----------NYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFIT 398
PP PP W +Y+ ++ R V L PG LG IRGG LGIFI+
Sbjct: 16 PPYESPPAWVPPHERVYHPDYNNELTQFLPRTVVLKKPPGAQLGFNIRGGKASQLGIFIS 75
Query: 399 GVDKDSVAERAGL 411
V DS A RAGL
Sbjct: 76 KVIPDSDAHRAGL 88
>sp|Q6QA76|PDZ11_PIG PDZ domain-containing protein 11 OS=Sus scrofa GN=PDZD11 PE=2 SV=1
Length = 140
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 18/114 (15%)
Query: 189 PRHRRLTPPD----IDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSI 244
P H R+ PD + Q R + + + A GF I +GG + +G++IS+V S
Sbjct: 26 PPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNI--RGGKAS-QLGIFISKVIPDSD 82
Query: 245 AERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298
A RAGL+ GD +L VN + F I H +A+ ++LK+ RE+SM VR
Sbjct: 83 AHRAGLQEGDQVLAVNDVDFQDIEHSKAV-----------EILKTAREISMRVR 125
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 354 PPRW----------NYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKD 403
PP W +Y+ ++ R V L PG LG IRGG LGIFI+ V D
Sbjct: 21 PPAWIPPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPD 80
Query: 404 SVAERAGL 411
S A RAGL
Sbjct: 81 SDAHRAGL 88
>sp|Q32LE7|PDZ11_BOVIN PDZ domain-containing protein 11 OS=Bos taurus GN=PDZD11 PE=2 SV=1
Length = 140
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 18/114 (15%)
Query: 189 PRHRRLTPPD----IDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSI 244
P H R+ PD + Q R + + + A GF I +GG + +G++IS+V S
Sbjct: 26 PPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNI--RGGKAS-QLGIFISKVIPDSD 82
Query: 245 AERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298
A RAGL+ GD +L VN + F I H +A+ ++LK+ RE+SM VR
Sbjct: 83 AHRAGLQEGDQVLAVNDVDFQDIEHSKAV-----------EILKTAREISMRVR 125
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 354 PPRW----------NYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKD 403
PP W +Y+ ++ R V L PG LG IRGG LGIFI+ V D
Sbjct: 21 PPAWIPPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPD 80
Query: 404 SVAERAGL 411
S A RAGL
Sbjct: 81 SDAHRAGL 88
>sp|Q9CZG9|PDZ11_MOUSE PDZ domain-containing protein 11 OS=Mus musculus GN=Pdzd11 PE=1
SV=1
Length = 140
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 18/114 (15%)
Query: 189 PRHRRLTPPD----IDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSI 244
P H R+ PD + Q R + + + A GF I +GG + +G++IS+V S
Sbjct: 26 PPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNI--RGGKAS-QLGIFISKVIPDSD 82
Query: 245 AERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298
A RAGL+ GD +L VN + F I H +A+ ++LK+ RE+SM VR
Sbjct: 83 AHRAGLQEGDQVLAVNDVDFQDIEHSKAV-----------EILKTAREISMRVR 125
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 354 PPRW----------NYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKD 403
PP W +Y+ ++ R V L PG LG IRGG LGIFI+ V D
Sbjct: 21 PPAWIPPHERVYHPDYNNELTQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPD 80
Query: 404 SVAERAGL 411
S A RAGL
Sbjct: 81 SDAHRAGL 88
>sp|Q6NXB2|PDZ11_DANRE PDZ domain-containing protein 11 OS=Danio rerio GN=pdzd11 PE=2 SV=1
Length = 142
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 183 EEHHHHPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEG 242
+E HHP + ++ Q RTI + + A GF I +GG + +G++IS+V
Sbjct: 30 QERIHHPDYNN----ELAQFLPRTIVLKKPPGAQLGFNI--RGGKAS-QLGIFISKVVPD 82
Query: 243 SIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298
S A RAGL+ GD +L VN + F I H A+ ++LK+ RE+ M VR
Sbjct: 83 SDAHRAGLQEGDQVLSVNEVDFQDIEHSRAV-----------EILKTAREILMKVR 127
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 339 DYARSVIPMP----PPPPPPPRW-----NYSARSSKDTVRKVELNIEPGQSLGLMIRGGV 389
DY V+ +P PP PP+ +Y+ ++ R + L PG LG IRGG
Sbjct: 9 DYQLPVVFLPSYENPPAWIPPQERIHHPDYNNELAQFLPRTIVLKKPPGAQLGFNIRGGK 68
Query: 390 EYNLGIFITGVDKDSVAERAGL 411
LGIFI+ V DS A RAGL
Sbjct: 69 ASQLGIFISKVVPDSDAHRAGL 90
>sp|Q6RHR9|MAGI1_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 1 OS=Mus musculus GN=Magi1 PE=1 SV=1
Length = 1471
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 77/199 (38%), Gaps = 25/199 (12%)
Query: 216 NHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALK 274
N GFG + + P G R+ EGS A+R G L+ GD IL VNG T SH + +
Sbjct: 998 NEGFGFVIVSSVSRPEAGTTFGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVN 1057
Query: 275 MCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPC 334
+ +E TV IP N L T + + I P
Sbjct: 1058 LI--------------KEAGNTVTLRIIPGDESSNATL-----LTNAEKIATITTTHAPS 1098
Query: 335 SPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPG-QSLGLMIRGGVEYNL 393
R+ P ++ + + + +E G + G +RGG EYN+
Sbjct: 1099 QQGTQETRTTTK----PKQDSQFEFKGPQAAQEQDFYTVELERGAKGFGFSLRGGREYNM 1154
Query: 394 GIFITGVDKDSVAERAGLL 412
+++ + +D AER G +
Sbjct: 1155 DLYVLRLAEDGPAERCGKM 1173
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKM 275
GFG ++GG + +Y+ R+ E AER G +R GD IL++NG + H A+++
Sbjct: 1141 GFGFSLRGGREY-NMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIEL 1198
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276
GFG + GG N PG +YI + A+ G LR GD ++ V+G P G SH+ +++
Sbjct: 842 GFGFRILGG-NEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQL- 899
Query: 277 FFEGYKEGQM-LKSNRELSMTV 297
+ K+G + L R++ V
Sbjct: 900 MQQAAKQGHVNLTVRRKVVFAV 921
>sp|Q09506|YQI7_CAEEL Uncharacterized protein C45G9.7 OS=Caenorhabditis elegans
GN=C45G9.7 PE=1 SV=1
Length = 124
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 230 PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKS 289
P GVYI+ VE GS A+ AGLR D ILQVNG FT ++H+ A+K +K
Sbjct: 57 PDSGVYITNVESGSPADVAGLRKHDKILQVNGADFTMMTHDRAVK-----------FIKQ 105
Query: 290 NRELSMTVRSPSIPP 304
++ L M V +PP
Sbjct: 106 SKVLHMLVARADLPP 120
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 64/263 (24%)
Query: 218 GFGICVKGGANN-----PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEA 272
G GI + GG + G++ISRV E A RAG+R GD +L+VNG+ G H EA
Sbjct: 737 GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEA 796
Query: 273 LKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGR 332
++ G ++ RE + P A PL P YS +R+G
Sbjct: 797 VEA--LRGAGTAVQMRVWRERMVE------PENAVTITPLRP------EDDYSPRERRGG 842
Query: 333 PCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGV--- 389
PL +PP P P R + A ++ + LG I GG
Sbjct: 843 GLRLPL--------LPPESPGPLRQRHVACLARSE-----------RGLGFSIAGGKGST 883
Query: 390 ---EYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSHEQT 446
+ GIF++ + + A RAG L + D V+S +
Sbjct: 884 PYRAGDAGIFVSRIAEGGAAHRAGTL--------------------QVGDRVLSINGVDV 923
Query: 447 SPSMYGVQATLLSSSSGSIVITL 469
+ + + +LL+++S +I + L
Sbjct: 924 TEARHDHAVSLLTAASPTIALLL 946
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 184 EHHHHPRHRR-------LTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNP-----G 231
E + PR RR L PP+ P+R ++ + G G + GG +
Sbjct: 831 EDDYSPRERRGGGLRLPLLPPESPG-PLRQRHVACLARSERGLGFSIAGGKGSTPYRAGD 889
Query: 232 VGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKM 275
G+++SR+ EG A RAG L+ GD +L +NG+ T H+ A+ +
Sbjct: 890 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSL 934
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 20/109 (18%)
Query: 203 PVRTINMNRSQDANHGFGICVKGGANNP----GV---GVYISRVEEGSIAERAGLRPGDS 255
PV I + R A G+ + GG+++ GV GV+IS+V +A R+GLR GD
Sbjct: 1001 PVEEIRLPR---AGGPLGLSIVGGSDHSSHPFGVQEPGVFISKVLPRGLAARSGLRVGDR 1057
Query: 256 ILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP 304
IL VNG +H+EA+ +L+ ELS+ VR PP
Sbjct: 1058 ILAVNGQDVRDATHQEAVSA----------LLRPCLELSLLVRRDPAPP 1096
Score = 35.4 bits (80), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 219 FGICVKGGAN----NP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISH 269
GI ++GGA NP G++IS+V A R G LR G +L+VN G++H
Sbjct: 1111 LGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTH 1170
Query: 270 EEALKM 275
EA+++
Sbjct: 1171 GEAVQL 1176
>sp|P54792|DVL1L_HUMAN Putative Segment polarity protein dishevelled homolog DVL-1-like
OS=Homo sapiens GN=DVL1L1 PE=5 SV=1
Length = 670
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 20/122 (16%)
Query: 206 TINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQVNGIP 263
T+NM R +H GIC+ G +N+ G G +YI + +G ++A + PGD +LQVN +
Sbjct: 253 TLNMER----HHFLGICIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVN 308
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP-----QAPRNHPLPP--PP 316
F +S+++A+++ +++ +S+TV P PR P+ P P
Sbjct: 309 FENMSNDDAVRVL-------REIVSQTGPISLTVAKCWDPTPRSYFTVPRPDPVRPIDPA 361
Query: 317 AW 318
AW
Sbjct: 362 AW 363
>sp|Q9QXY1|ZO3_MOUSE Tight junction protein ZO-3 OS=Mus musculus GN=Tjp3 PE=1 SV=1
Length = 905
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 219 FGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277
G+ + GG + VG+++S V+ GS A+ G++ GD ILQVNG+PF ++ EEA++
Sbjct: 380 IGLRLAGGND---VGIFVSGVQAGSPADGQGIQEGDEILQVNGMPFRNLTREEAVQFLL 435
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 191 HRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-G 249
++RL D+ P++++ + R + FG+ + G ++I + E +A R G
Sbjct: 172 YKRLPKQDVLMRPLKSVLVKRRN--SEEFGVKL-------GSQIFIKHITESGLAARNHG 222
Query: 250 LRPGDSILQVNGIPFTGISHEEALKMC 276
L+ GD ILQ+NG+ +S + ++
Sbjct: 223 LQEGDLILQINGVSSANLSLSDTRRLI 249
>sp|Q4L1J4|MAGI1_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 1 OS=Rattus norvegicus GN=Magi1 PE=1 SV=1
Length = 1255
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 37/211 (17%)
Query: 216 NHGFGICVKGGANNPGVGVY------------ISRVEEGSIAERAG-LRPGDSILQVNGI 262
N GFG + + P G I R+ EGS A+R G L+ GD IL VNG
Sbjct: 1005 NEGFGFVIVSSVSRPEAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGC 1064
Query: 263 PFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQ 322
T SH + + + +E TV IP N L T +
Sbjct: 1065 SITNKSHSDIVNLI--------------KEAGNTVTLRIIPGDESSNATL-----LTNAE 1105
Query: 323 AYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPG-QSL 381
+ I P R+ P P ++ + + + +E G +
Sbjct: 1106 KIATITTTHAPSQQGTQETRTTTK----PKPDSQFEFKGPQATQEQDFYTVELERGAKGF 1161
Query: 382 GLMIRGGVEYNLGIFITGVDKDSVAERAGLL 412
G +RGG EYN+ +++ + +D AER G +
Sbjct: 1162 GFSLRGGREYNMDLYVLRLAEDGPAERCGKM 1192
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276
GFG + GG N PG +YI + A+ G LR GD ++ V+G P G SH+ +++
Sbjct: 849 GFGFRILGG-NEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQL- 906
Query: 277 FFEGYKEGQM-LKSNRELSMTV 297
+ K+G + L R++ TV
Sbjct: 907 MQQAAKQGHVNLTVRRKVVFTV 928
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKM 275
GFG ++GG + +Y+ R+ E AER G +R GD IL++NG + H A+++
Sbjct: 1160 GFGFSLRGGREY-NMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIEL 1217
>sp|O62683|ZO3_CANFA Tight junction protein ZO-3 OS=Canis familiaris GN=TJP3 PE=1 SV=1
Length = 898
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 219 FGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277
G+ + GG + VG+++S V+EGS A+ G++ GD ILQVN +PF ++ EEA++
Sbjct: 381 IGLRLAGGND---VGIFVSGVQEGSPADGQGIQEGDQILQVNDVPFRNLTREEAVQFLV 436
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 192 RRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGL 250
+RL D+ PV+++ + R++ + FG+ + G ++I + + +A R GL
Sbjct: 173 KRLPRQDVHMRPVKSVLVRRTE--SEEFGVTL-------GSQIFIKHITDSGLAARNRGL 223
Query: 251 RPGDSILQVNGIPFTGISHEEALKMC 276
+ GD ILQ+NG+ +S + ++
Sbjct: 224 QEGDLILQINGVSSENLSLSDTRRLI 249
>sp|Q9ES64|USH1C_MOUSE Harmonin OS=Mus musculus GN=Ush1c PE=1 SV=1
Length = 910
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 14/83 (16%)
Query: 216 NHGFGICVKGG-ANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALK 274
+ G G + G PG+ ++S V+ GS++ GL GD I++VNGI FT + H+EA+
Sbjct: 219 SRGLGCSISSGPIQKPGI--FVSHVKPGSLSAEVGLETGDQIVEVNGIDFTNLDHKEAV- 275
Query: 275 MCFFEGYKEGQMLKSNRELSMTV 297
+LKS+R L++++
Sbjct: 276 ----------NVLKSSRSLTISI 288
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 187 HHPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAE 246
H + +LTP +L + + ++R G G+ V+GG G G++IS + +G A+
Sbjct: 70 HQVEYDQLTPRRSRKL--KEVRLDRLHP--EGLGLSVRGGLEF-GCGLFISHLIKGGQAD 124
Query: 247 RAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP 304
GL+ GD I+++NG + +HEE + ++++ + +S+ VR + P
Sbjct: 125 SVGLQVGDEIVRINGYSISSCTHEEVI-----------NLIRTKKTVSIKVRHIGLIP 171
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 28/206 (13%)
Query: 79 KAGLYYSPPGTSYTIVERPPPPPPVPLPQPPKPRGTYLGTNGSSYRTQPSSTEYRSNSPS 138
+A + P +S T PP P P P PRG G S ++P N
Sbjct: 648 EANTHSGKPSSSPTTERSFPPAPKTFCPSPQPPRGP-----GVSTISKPVMVHQEHNF-- 700
Query: 139 NNTSSSYRNTSSHSHGTKKGALSPEQVLKMLTSGGGGKKSAEGSEEHHHHPRHRRLTPPD 198
YR K + P+++LK + + E P + +P
Sbjct: 701 -----VYRPAV-------KSEVLPQEMLKRMVVYQTAFRQDFRKYEEGFDP-YSMFSPEQ 747
Query: 199 IDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGLRPGDSIL 257
I VR + + + + ++GG ++P V +S V EG AER G+ GD I+
Sbjct: 748 IAGKDVRLLRIKK----EGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIM 803
Query: 258 QVNG---IPFTGISHEEALKMCFFEG 280
+NG +T E AL+ + +G
Sbjct: 804 AINGKIVTDYTLAEAEAALQKAWNQG 829
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLV 413
+++V L+ + LGL +RGG+E+ G+FI+ + K A+ GL V
Sbjct: 85 LKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQV 130
>sp|O95049|ZO3_HUMAN Tight junction protein ZO-3 OS=Homo sapiens GN=TJP3 PE=1 SV=2
Length = 933
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 219 FGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277
G+ + GG + VG+++S V+ GS A+ G++ GD ILQVN +PF ++ EEA++
Sbjct: 406 IGLRLAGGND---VGIFVSGVQAGSPADGQGIQEGDQILQVNDVPFQNLTREEAVQFLL 461
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 212 SQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEE 271
S+D GFGI + GG + PG + +S V G AE L+ GD I+ VNG+ +
Sbjct: 15 SKDPRRGFGIAISGGRDRPGGSMVVSDVVPGGPAE-GRLQTGDHIVMVNGVSMENATSAF 73
Query: 272 A---LKMC 276
A LK C
Sbjct: 74 AIQILKTC 81
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 192 RRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGL 250
+RL D+ PV+++ + R + FG+ + G ++I + + +A R GL
Sbjct: 181 KRLPRQDVQMKPVKSVLVKRRD--SEEFGVKL-------GSQIFIKHITDSGLAARHRGL 231
Query: 251 RPGDSILQVNGIPFTGISHEEALKMC 276
+ GD ILQ+NG+ +S + ++
Sbjct: 232 QEGDLILQINGVSSQNLSLNDTRRLI 257
>sp|Q96QZ7|MAGI1_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 1 OS=Homo sapiens GN=MAGI1 PE=1 SV=3
Length = 1491
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 37/211 (17%)
Query: 216 NHGFGICVKGGANNPGVGV------------YISRVEEGSIAERAG-LRPGDSILQVNGI 262
N GFG + + P G I R+ EGS A+R G L+ GD IL VNG
Sbjct: 1006 NEGFGFVIVSSVSRPEAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGC 1065
Query: 263 PFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQ 322
T SH + + + +E TV IP N L T +
Sbjct: 1066 SITNKSHSDIVNLI--------------KEAGNTVTLRIIPGDESSNATL-----LTNAE 1106
Query: 323 AYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPG-QSL 381
+ I P R+ P ++ + A + + +E G +
Sbjct: 1107 KIATITTTHTPSQQGTQETRNTTK----PKQESQFEFKAPQATQEQDFYTVELERGAKGF 1162
Query: 382 GLMIRGGVEYNLGIFITGVDKDSVAERAGLL 412
G +RGG EYN+ +++ + +D AER G +
Sbjct: 1163 GFSLRGGREYNMDLYVLRLAEDGPAERCGKM 1193
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276
GFG ++GG + +Y+ R+ E AER G +R GD IL++NG + H A+++
Sbjct: 1161 GFGFSLRGGREY-NMDLYVLRLAEDGPAERCGKMRIGDEILEINGETTKNMKHSRAIELI 1219
Query: 277 FFEGYKEGQMLK 288
G + LK
Sbjct: 1220 KNGGRRVRLFLK 1231
Score = 38.9 bits (89), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276
GFG + GG N PG +YI + A+ G LR GD ++ V+G P G SH+ +++
Sbjct: 850 GFGFRILGG-NEPGEPIYIGHIVPLGAADTDGRLRSGDELICVDGTPVIGKSHQLVVQL- 907
Query: 277 FFEGYKEGQM-LKSNRELSMTV 297
+ K+G + L R++ V
Sbjct: 908 MQQAAKQGHVNLTVRRKVVFAV 929
>sp|Q4H4B6|SCRIB_DANRE Protein scribble homolog OS=Danio rerio GN=scrib PE=1 SV=1
Length = 1724
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 18/93 (19%)
Query: 212 SQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEE 271
S A+H FGI N PGV +IS+V +A ++GLR GD IL+VN I +H+E
Sbjct: 1023 SDHASHPFGI------NEPGV--FISKVIPNGLASQSGLRVGDRILEVNSIDLRHATHQE 1074
Query: 272 ALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP 304
A++ +L + +E+ M VR PP
Sbjct: 1075 AVRA----------LLSNKQEIRMLVRRDPSPP 1097
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 218 GFGICVKGGANN-----PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEA 272
G GI + GG + G++ISRV E A RAG++ GD +L+VNG+ G H A
Sbjct: 740 GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHGAEHHTA 799
Query: 273 LK 274
++
Sbjct: 800 VE 801
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 216 NHGFGICVKGGANNP-----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISH 269
+ G G + GG + G++ISR+ EG A R L+ GD ++ +NG+ T H
Sbjct: 874 DKGLGFSIAGGKGSTLYRVGDTGIFISRIAEGGAAHRDNILQVGDRVISINGVDMTEARH 933
Query: 270 EEALKMC 276
++A+ +
Sbjct: 934 DQAVALL 940
>sp|Q9Y4G8|RPGF2_HUMAN Rap guanine nucleotide exchange factor 2 OS=Homo sapiens GN=RAPGEF2
PE=1 SV=1
Length = 1499
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 226 GANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQ 285
G + G G+++ V+ GS A AGL+ GD IL+VNG F I +A+ +
Sbjct: 403 GGSEKGFGIFVDSVDSGSKATEAGLKRGDQILEVNGQNFENIQLSKAM-----------E 451
Query: 286 MLKSNRELSMTVRS 299
+L++N LS+TV++
Sbjct: 452 ILRNNTHLSITVKT 465
>sp|Q61235|SNTB2_MOUSE Beta-2-syntrophin OS=Mus musculus GN=Sntb2 PE=1 SV=2
Length = 520
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-GLRPGDSILQVNG 261
PVR + + + Q+A G GI +KGG N + + IS++ G A+++ LR GD+IL VNG
Sbjct: 92 PVRRVRVVK-QEAG-GLGISIKGGRENR-MPILISKIFPGLAADQSRALRLGDAILSVNG 148
Query: 262 IPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMR 321
+H++A++ G + +K RE++ ++ PS+ P P P
Sbjct: 149 TDLRQATHDQAVQALKRAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGASPQSP----- 203
Query: 322 QAYSWIDRQGRPCSPPLDYARSVIPM 347
++S + G P R VIP+
Sbjct: 204 -SFSGSEDSGSPKHQNTTKDRKVIPL 228
>sp|Q3MHQ0|USH1C_BOVIN Harmonin OS=Bos taurus GN=USH1C PE=2 SV=1
Length = 551
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 11/65 (16%)
Query: 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRE 292
G++IS V+ GS++ GL GD I++VNGI F+ + H+EA+ +LKS+R
Sbjct: 235 GIFISHVKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEAV-----------NVLKSSRS 283
Query: 293 LSMTV 297
L++++
Sbjct: 284 LTISI 288
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 187 HHPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAE 246
H + +LTP +L + + ++R G G+ V+GG G G++IS + + A+
Sbjct: 70 HQVEYDQLTPRRSRKL--KEVRLDRLH--PEGLGLSVRGGLEF-GCGLFISHLIKDGQAD 124
Query: 247 RAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS-IPPQ 305
GL+ GD I+++NG + +HEE + ++++ + +S+ VR IP +
Sbjct: 125 SVGLQVGDEIVRINGYSISSCTHEEVI-----------NLIRTKKTVSIKVRHIGLIPVK 173
Query: 306 APRNHPL 312
+ + PL
Sbjct: 174 SSPDEPL 180
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 336 PPLDYARSVIPMPPP---PPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYN 392
P D R +IP+ PR RS K +++V L+ + LGL +RGG+E+
Sbjct: 57 PLFDAIRPLIPLKHQVEYDQLTPR-----RSRK--LKEVRLDRLHPEGLGLSVRGGLEFG 109
Query: 393 LGIFITGVDKDSVAERAGLLV 413
G+FI+ + KD A+ GL V
Sbjct: 110 CGLFISHLIKDGQADSVGLQV 130
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 194 LTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGLRP 252
TP I VR + + + + ++GG ++P V +S V EG AER G+
Sbjct: 443 FTPEQIMGKDVRLLRVKKE----GALDLALEGGVDSPIGKVVVSAVYEGGAAERHGGIVK 498
Query: 253 GDSILQVNGIPFTGISHEEA 272
GD I+ +NG T + EA
Sbjct: 499 GDEIMAINGKIVTDYTLAEA 518
>sp|Q13425|SNTB2_HUMAN Beta-2-syntrophin OS=Homo sapiens GN=SNTB2 PE=1 SV=1
Length = 540
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-GLRPGDSILQVNG 261
PVR + + + Q+A G GI +KGG N + + IS++ G A+++ LR GD+IL VNG
Sbjct: 112 PVRRVRVVK-QEAG-GLGISIKGGRENR-MPILISKIFPGLAADQSRALRLGDAILSVNG 168
Query: 262 IPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWT 319
+H++A++ G + +K RE++ ++ PS+ P P P+++
Sbjct: 169 TDLRQATHDQAVQALKRAGKEVLLEVKFIREVTPYIKKPSLVSDLPWEGAAPQSPSFS 226
>sp|Q9DBG9|TX1B3_MOUSE Tax1-binding protein 3 OS=Mus musculus GN=Tax1bp3 PE=1 SV=1
Length = 124
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALK 274
G+Y++RV EG AE AGL+ GD I+QVNG T ++H++A K
Sbjct: 54 GIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARK 95
>sp|O14907|TX1B3_HUMAN Tax1-binding protein 3 OS=Homo sapiens GN=TAX1BP3 PE=1 SV=2
Length = 124
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALK 274
G+Y++RV EG AE AGL+ GD I+QVNG T ++H++A K
Sbjct: 54 GIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARK 95
>sp|Q5F488|MAGI3_CHICK Membrane-associated guanylate kinase, WW and PDZ domain-containing
protein 3 OS=Gallus gallus GN=MAGI3 PE=2 SV=1
Length = 1128
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 116/287 (40%), Gaps = 47/287 (16%)
Query: 161 SPEQVLKMLTSGG---------------GGKKSAEGSEEH-----HHHPRHRRLTPPDID 200
S +QVL ++TS GG+K AE E + PR R
Sbjct: 787 SHKQVLDLMTSAARNGQVLLTVRRKIFFGGEKQAEEDESQAVVTQNSSPRLNRAEFATQQ 846
Query: 201 QLPVRTINMNRSQDANHGFGICVKGGANNPGVGVY---ISRVEEGSIAERAG-LRPGDSI 256
V + + R + N GFG + N P GV I RV +GS A++ G L+ GD I
Sbjct: 847 SPEVYDVCLQRKE--NEGFGFVILTSKNKPPPGVIPHKIGRVIDGSPADQCGKLKVGDRI 904
Query: 257 LQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNREL----SMTVRSPSIPPQAPRNHPL 312
VNG +SH+ +++ G+ + + E S T + P AP++ PL
Sbjct: 905 SAVNGQSIVELSHDSIVQLIKDAGHVVTLTVVAEEEHRGPPSGTNSAKQSP--APQHRPL 962
Query: 313 PPPPAWTMRQAYSWIDR---QGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVR 369
P + + S DR +G + R P P + S S+ +
Sbjct: 963 GP-----AQSSASSTDRGATEGEAGKEVSNSYRLSWPEHKHLAQPDAGSASGVGSRHSQA 1017
Query: 370 K------VELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG 410
+ VEL P + G +RGG EYN+G+FI + +D A + G
Sbjct: 1018 QNSGCFPVELERGP-RGFGFSLRGGKEYNMGLFILRLAEDGPAVKDG 1063
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 196 PPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGD 254
PP+ L V R Q++ GF + GA+ P +YI + AE+ G LR D
Sbjct: 721 PPNTRDLDV----FLRKQESGFGFRVLGGDGADQP---IYIGAIIPLGAAEKDGRLRAAD 773
Query: 255 SILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNR 291
++ ++G+P G SH++ L + + GQ+L + R
Sbjct: 774 ELMCIDGVPVKGKSHKQVLDL-MTSAARNGQVLLTVR 809
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276
GFG ++GG +G++I R+ E A + G + GD I+++NG P GI+H A+++
Sbjct: 1033 GFGFSLRGGKEY-NMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELI 1091
Query: 277 FFEGYKEGQMLK 288
G K +L+
Sbjct: 1092 QAGGNKVLLLLR 1103
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 213 QDANHGFGICVKGGANNPGVGVYISRV-EEGSIAERAGLRPGDSILQVNGIPFTGISHEE 271
+ + GFG + GG + P + + V ++G A+ + PGD I+ +NG G +H +
Sbjct: 416 KKSTMGFGFTIIGG-DRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGNCVLGHTHAD 474
Query: 272 ALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLP 313
++M Q++ N+ ++MT+ R +PLP
Sbjct: 475 VVQMF--------QLVPVNQYVNMTL---------CRGYPLP 499
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 252 PGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNR 291
PGD +L+VNG P +G++H + L + ++E LK+ R
Sbjct: 69 PGDVLLEVNGTPVSGLTHRDTLAV--IRHFREPVRLKTVR 106
>sp|Q80U72|SCRIB_MOUSE Protein scribble homolog OS=Mus musculus GN=Scrib PE=1 SV=2
Length = 1612
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 218 GFGICVKGGANNP-----GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEA 272
G GI + GG + G++ISRV E A RAG+R GD +L+VNG+ H EA
Sbjct: 723 GLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQDAEHHEA 782
Query: 273 LK 274
++
Sbjct: 783 VE 784
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 20/109 (18%)
Query: 203 PVRTINMNRSQDANHGFGICVKGGANNP----GV---GVYISRVEEGSIAERAGLRPGDS 255
PV I + R A G+ + GG+++ GV GV+IS+V +A R GLR GD
Sbjct: 987 PVEEICLPR---AGGPLGLSIVGGSDHSSHPFGVQDPGVFISKVLPRGLAARCGLRVGDR 1043
Query: 256 ILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP 304
IL VNG +H+EA+ +L+ EL + VR PP
Sbjct: 1044 ILAVNGQDVREATHQEAVSA----------LLRPCLELCLLVRRDPPPP 1082
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 215 ANHGFGICVKGGANNP-----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGIS 268
+ G G + GG + G++ISR+ EG A RAG L+ GD +L +NG+ T
Sbjct: 854 SEKGLGFSIAGGKGSTPYRAGDGGIFISRIAEGGAAHRAGTLQVGDRVLSINGVDMTEAR 913
Query: 269 HEEALKM 275
H+ A+ +
Sbjct: 914 HDHAVSL 920
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 219 FGICVKGGAN----NP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISH 269
GI ++GGA NP G++IS+V A R G LR G +L+VN G++H
Sbjct: 1097 LGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTH 1156
Query: 270 EEALKM 275
EA+++
Sbjct: 1157 AEAVQL 1162
>sp|Q5IS48|DVL1_PANTR Segment polarity protein dishevelled homolog DVL-1 OS=Pan
troglodytes GN=DVL1 PE=2 SV=1
Length = 670
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 20/122 (16%)
Query: 206 TINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQVNGIP 263
T+NM R +H GI + G +N+ G G +YI + +G ++A + PGD +LQVN +
Sbjct: 253 TLNMER----HHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVN 308
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP-----QAPRNHPLPP--PP 316
F +S+++A+++ +++ +S+TV P PR P+ P P
Sbjct: 309 FENMSNDDAVRVL-------REIVSQTGPISLTVAKCWDPTPRSYFTVPRADPVRPIDPA 361
Query: 317 AW 318
AW
Sbjct: 362 AW 363
>sp|Q9Y6N9|USH1C_HUMAN Harmonin OS=Homo sapiens GN=USH1C PE=1 SV=3
Length = 552
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 11/65 (16%)
Query: 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRE 292
G++IS V+ GS++ GL GD I++VNG+ F+ + H+EA+ +LKS+R
Sbjct: 235 GIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAV-----------NVLKSSRS 283
Query: 293 LSMTV 297
L++++
Sbjct: 284 LTISI 288
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 17/127 (13%)
Query: 187 HHPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAE 246
H + +LTP +L + + ++R G G+ V+GG G G++IS + +G A+
Sbjct: 70 HQVEYDQLTPRRSRKL--KEVRLDRLH--PEGLGLSVRGGLEF-GCGLFISHLIKGGQAD 124
Query: 247 RAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS-IPPQ 305
GL+ GD I+++NG + +HEE + ++++ + +S+ VR IP +
Sbjct: 125 SVGLQVGDEIVRINGYSISSCTHEEVI-----------NLIRTKKTVSIKVRHIGLIPVK 173
Query: 306 APRNHPL 312
+ + PL
Sbjct: 174 SSPDEPL 180
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 336 PPLDYARSVIPMPPP---PPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYN 392
P D R +IP+ PR RS K +++V L+ + LGL +RGG+E+
Sbjct: 57 PLFDAIRPLIPLKHQVEYDQLTPR-----RSRK--LKEVRLDRLHPEGLGLSVRGGLEFG 109
Query: 393 LGIFITGVDKDSVAERAGLLV 413
G+FI+ + K A+ GL V
Sbjct: 110 CGLFISHLIKGGQADSVGLQV 130
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 194 LTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGLRP 252
TP I VR + + + + ++GG ++P V +S V E AER G+
Sbjct: 443 FTPEQIMGKDVRLLRIKK----EGSLDLALEGGVDSPIGKVVVSAVYERGAAERHGGIVK 498
Query: 253 GDSILQVNGIPFTGISHEEA 272
GD I+ +NG T + EA
Sbjct: 499 GDEIMAINGKIVTDYTLAEA 518
>sp|O14640|DVL1_HUMAN Segment polarity protein dishevelled homolog DVL-1 OS=Homo sapiens
GN=DVL1 PE=1 SV=2
Length = 695
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 20/122 (16%)
Query: 206 TINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQVNGIP 263
T+NM R +H GI + G +N+ G G +YI + +G ++A + PGD +LQVN +
Sbjct: 253 TLNMER----HHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVN 308
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP-----QAPRNHPLPP--PP 316
F +S+++A+++ +++ +S+TV P PR P+ P P
Sbjct: 309 FENMSNDDAVRVL-------REIVSQTGPISLTVAKCWDPTPRSYFTVPRADPVRPIDPA 361
Query: 317 AW 318
AW
Sbjct: 362 AW 363
>sp|Q3UHD6|SNX27_MOUSE Sorting nexin-27 OS=Mus musculus GN=Snx27 PE=1 SV=2
Length = 539
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 235 YISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELS 294
++S V G A+RAG+R GD IL+VNG+ G +H++ + + + +EL
Sbjct: 78 HVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDL----------IRAGEKELI 127
Query: 295 MTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPP 337
+TV S+PP N L P + Y + ++Q P S P
Sbjct: 128 LTV--LSVPPHEADN--LDPSDDSLGQSFYDYTEKQAVPISVP 166
>sp|A5PKA5|SNX27_BOVIN Sorting nexin-27 OS=Bos taurus GN=SNX27 PE=2 SV=1
Length = 541
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 235 YISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELS 294
++S V G A+RAG+R GD IL+VNG+ G +H++ + + + +EL
Sbjct: 80 HVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDL----------IRAGEKELI 129
Query: 295 MTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPP 337
+TV S+PP N L P + Y + ++Q P S P
Sbjct: 130 LTV--LSVPPHEADN--LDPSDDSLGQSFYDYTEKQAVPISVP 168
>sp|Q8K4V4|SNX27_RAT Sorting nexin-27 OS=Rattus norvegicus GN=Snx27 PE=1 SV=2
Length = 539
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 235 YISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELS 294
++S V G A+RAG+R GD IL+VNG+ G +H++ + + + +EL
Sbjct: 78 HVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDL----------IRAGEKELI 127
Query: 295 MTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPP 337
+TV S+PP N L P + Y + ++Q P S P
Sbjct: 128 LTV--LSVPPHEADN--LDPSDDSLGQSFYDYTEKQAVPISVP 166
>sp|Q9NZN5|ARHGC_HUMAN Rho guanine nucleotide exchange factor 12 OS=Homo sapiens
GN=ARHGEF12 PE=1 SV=1
Length = 1544
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 21/96 (21%)
Query: 213 QDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEA 272
Q ++GFG+ V G +NP V++ V+E A RAG++ GD I++VNG T +H E
Sbjct: 76 QKDDNGFGLTVSG--DNP---VFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEV 130
Query: 273 LKMCFFEGYKEGQMLKSNRELSMTVR-----SPSIP 303
+K ++KS +++TV+ SP IP
Sbjct: 131 VK-----------LIKSGSYVALTVQGRPPGSPQIP 155
>sp|Q9WVB9|DVL1_RAT Segment polarity protein dishevelled homolog DVL-1 OS=Rattus
norvegicus GN=Dvl1 PE=1 SV=3
Length = 695
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 20/122 (16%)
Query: 206 TINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQVNGIP 263
T+NM R +H GI + G +N+ G G +YI + +G ++A + PGD +LQVN +
Sbjct: 253 TLNMER----HHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVN 308
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP-----QAPRNHPLPP--PP 316
F +S+++A+++ +++ +S+TV P PR P+ P P
Sbjct: 309 FENMSNDDAVRVL-------REIVSQTGPISLTVAKCWDPTPRSYFTIPRADPVRPIDPA 361
Query: 317 AW 318
AW
Sbjct: 362 AW 363
>sp|Q05AS8|DVL2_XENTR Segment polarity protein dishevelled homolog DVL-2 OS=Xenopus
tropicalis GN=dvl2 PE=2 SV=1
Length = 732
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 18/131 (13%)
Query: 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQV 259
L + T+ +N + + GI + G +N G G +YI + +G ++A + PGD +LQV
Sbjct: 246 LNIITVTLN--MEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQV 303
Query: 260 NGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIP-PQA----PRNHPLPP 314
N I F +S+++A+++ +K G ++ +TV P PQ PRN P+ P
Sbjct: 304 NDINFENMSNDDAVRVLRDIVHKPGPII-------LTVAKCWDPSPQGYFTLPRNEPIQP 356
Query: 315 --PPAWTMRQA 323
P AW A
Sbjct: 357 IDPAAWVSHSA 367
>sp|F1M386|RPGF2_RAT Rap guanine nucleotide exchange factor 2 OS=Rattus norvegicus
GN=Rapgef2 PE=1 SV=2
Length = 1496
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Query: 226 GANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQ 285
G + G G+++ V+ S A AGL+ GD IL+VNG F I +A+ +
Sbjct: 403 GGSEKGFGIFVDSVDSSSKATEAGLKRGDQILEVNGQNFENIQLSKAM-----------E 451
Query: 286 MLKSNRELSMTVRS 299
+L++N LS+TV++
Sbjct: 452 ILRNNTHLSITVKT 465
>sp|P51141|DVL1_MOUSE Segment polarity protein dishevelled homolog DVL-1 OS=Mus musculus
GN=Dvl1 PE=1 SV=2
Length = 695
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 20/122 (16%)
Query: 206 TINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQVNGIP 263
T+NM R +H GI + G +N+ G G +YI + +G ++A + PGD +LQVN +
Sbjct: 253 TLNMER----HHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVN 308
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPP-----QAPRNHPLPP--PP 316
F +S+++A+++ +++ +S+TV P PR P+ P P
Sbjct: 309 FENMSNDDAVRVL-------REIVSQTGPISLTVAKCWDPTPRSYFTIPRADPVRPIDPA 361
Query: 317 AW 318
AW
Sbjct: 362 AW 363
>sp|Q925E1|SNTG1_MOUSE Gamma-1-syntrophin OS=Mus musculus GN=Sntg1 PE=2 SV=2
Length = 517
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 17/110 (15%)
Query: 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLR-PGDSILQVNGIP 263
RT+ + R GFG+ +KGGA + + V IS++ + AE +GL GD+ILQ+NGI
Sbjct: 56 RTVTIRRQTVG--GFGLSIKGGAEH-NIPVVISKISKEQRAELSGLLFIGDAILQINGIN 112
Query: 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLP 313
HEE +++ + + E+++TV S +AP LP
Sbjct: 113 VRKCRHEEVVQV----------LRNAGEEVTLTV---SFLKRAPAFLKLP 149
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 369 RKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLL 412
R V + + GL I+GG E+N+ + I+ + K+ AE +GLL
Sbjct: 56 RTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLL 99
>sp|Q60838|DVL2_MOUSE Segment polarity protein dishevelled homolog DVL-2 OS=Mus musculus
GN=Dvl2 PE=1 SV=2
Length = 736
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQV 259
L + T+ +N + + GI + G +N G G +YI + +G ++A + PGD +LQV
Sbjct: 263 LNIITVTLN--MEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQV 320
Query: 260 NGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIP-PQA----PRNHPLPP 314
N + F +S+++A+++ +K G ++ +TV P PQA PRN P+ P
Sbjct: 321 NDMNFENMSNDDAVRVLRDIVHKPGPIV-------LTVAKCWDPSPQAYFTLPRNEPIQP 373
Query: 315 --PPAWTMRQA 323
P AW A
Sbjct: 374 IDPAAWVSHSA 384
>sp|Q8CHG7|RPGF2_MOUSE Rap guanine nucleotide exchange factor 2 OS=Mus musculus GN=Rapgef2
PE=1 SV=2
Length = 1496
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Query: 226 GANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQ 285
G + G G+++ V+ S A AGL+ GD IL+VNG F I +A+ +
Sbjct: 403 GGSEKGFGIFVDSVDSCSKATEAGLKRGDQILEVNGQNFENIQLSKAM-----------E 451
Query: 286 MLKSNRELSMTVRS 299
+L++N LS+TV++
Sbjct: 452 ILRNNTHLSITVKT 465
>sp|O14641|DVL2_HUMAN Segment polarity protein dishevelled homolog DVL-2 OS=Homo sapiens
GN=DVL2 PE=1 SV=1
Length = 736
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVG-VYISRVEEG-SIAERAGLRPGDSILQV 259
+ + I + + + + GI + G +N G G +YI + +G ++A + PGD +LQV
Sbjct: 261 MSLNIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQV 320
Query: 260 NGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIP-PQA----PRNHPLPP 314
N + F +S+++A+++ +K G ++ +TV P PQA PRN P+ P
Sbjct: 321 NDMNFENMSNDDAVRVLRDIVHKPGPIV-------LTVAKCWDPSPQAYFTLPRNEPIQP 373
Query: 315 --PPAWTMRQA 323
P AW A
Sbjct: 374 IDPAAWVSHSA 384
>sp|Q12923|PTN13_HUMAN Tyrosine-protein phosphatase non-receptor type 13 OS=Homo sapiens
GN=PTPN13 PE=1 SV=2
Length = 2485
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 203 PVRTINM-NRSQDANHGFGICVKGGAN--NPGVGVYISRVEEGSIAERAG-LRPGDSILQ 258
P R I + N +DA +G G + GG +G++IS V G A+ G L+PGD ++
Sbjct: 1087 PEREITLVNLKKDAKYGLGFQIIGGEKMGRLDLGIFISSVAPGGPADLDGCLKPGDRLIS 1146
Query: 259 VNGIPFTGISHEEALKM 275
VN + G+SH A+++
Sbjct: 1147 VNSVSLEGVSHHAAIEI 1163
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 216 NHGFGICVKGGANNPGV--GVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEA 272
++ GI V GG N G+Y+ V AE G + GD +L VNG+ G +H++A
Sbjct: 1375 DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQA 1434
Query: 273 LK 274
++
Sbjct: 1435 VE 1436
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 207 INMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTG 266
I + +S+ + GF + KG N +G Y+ V + L+PGD +++VN T
Sbjct: 1789 ITLIKSEKGSLGFTV-TKG---NQRIGCYVHDVIQDPAKSDGRLKPGDRLIKVNDTDVTN 1844
Query: 267 ISHEEALKM 275
++H +A+ +
Sbjct: 1845 MTHTDAVNL 1853
>sp|O61967|LAP1_CAEEL Protein lap1 OS=Caenorhabditis elegans GN=let-413 PE=1 SV=3
Length = 699
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 45/199 (22%)
Query: 110 KPRGTYLGTNGSSYRTQPSSTEYRSNSPSNNTSSSYRNTSSHSHGTKKGALSPEQVLKML 169
+PR L +N +RT SS SNS + + + +G ++ LSPE+ +M
Sbjct: 499 QPRQLSLVSN---HRTSTSSFGESSNSINRDLADIR-----AQNGVREATLSPEREERMA 550
Query: 170 TSGGGGKKSAEGSEEHHHHPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANN 229
TS A G++ H TI + + D G+ GG +N
Sbjct: 551 TSLSSLSNLAAGTQNMH-------------------TIRIQK--DDTGKLGLSFAGGTSN 589
Query: 230 P-------GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282
G+++++V GS A R GLR GD +++ N + S + A+ E K
Sbjct: 590 DPAPNSNGDSGLFVTKVTPGSAAYRCGLREGDKLIRANDVNMINASQDNAM-----EAIK 644
Query: 283 EGQMLKSNRELSMTVRSPS 301
+ + + EL + RSPS
Sbjct: 645 KRETV----ELVVLRRSPS 659
>sp|Q9Z250|LIN7A_RAT Protein lin-7 homolog A OS=Rattus norvegicus GN=Lin7a PE=1 SV=2
Length = 232
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 216 NHGFGICVKGGA--NNPGVGVYISRVEEGSIAER-AGLRPGDSILQVNGIPFTGISHEEA 272
+ G G V GG N+P +YISR+ G +AER GL+ GD +L VNG+ G HE+A
Sbjct: 115 DEGLGFNVMGGKEQNSP---IYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKA 171
Query: 273 LKM 275
+++
Sbjct: 172 VEL 174
>sp|Q8JZS0|LIN7A_MOUSE Protein lin-7 homolog A OS=Mus musculus GN=Lin7a PE=1 SV=2
Length = 233
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 216 NHGFGICVKGGA--NNPGVGVYISRVEEGSIAER-AGLRPGDSILQVNGIPFTGISHEEA 272
+ G G V GG N+P +YISR+ G +AER GL+ GD +L VNG+ G HE+A
Sbjct: 115 DEGLGFNVMGGKEQNSP---IYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKA 171
Query: 273 LKM 275
+++
Sbjct: 172 VEL 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,375,462
Number of Sequences: 539616
Number of extensions: 10211152
Number of successful extensions: 88733
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 848
Number of HSP's that attempted gapping in prelim test: 63486
Number of HSP's gapped (non-prelim): 18928
length of query: 469
length of database: 191,569,459
effective HSP length: 121
effective length of query: 348
effective length of database: 126,275,923
effective search space: 43944021204
effective search space used: 43944021204
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)