Query psy14977
Match_columns 469
No_of_seqs 300 out of 2370
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 17:23:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14977.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14977hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 99.9 9.9E-24 3.4E-28 196.1 20.8 166 202-443 4-180 (196)
2 3r0h_A INAD, inactivation-NO-a 99.9 2.1E-23 7.2E-28 196.4 22.5 173 188-443 8-186 (206)
3 2qt5_A Glutamate receptor-inte 99.9 2E-21 7E-26 182.4 21.3 172 204-443 8-185 (200)
4 1p1d_A PDZ45, glutamate recept 99.9 2.3E-20 7.9E-25 174.9 20.4 173 203-443 6-185 (196)
5 2xkx_A Disks large homolog 4; 99.8 2.6E-20 8.9E-25 206.8 21.9 179 188-443 45-234 (721)
6 1w9e_A Syntenin 1; cell adhesi 99.8 4.5E-19 1.5E-23 162.0 21.4 153 203-443 4-156 (166)
7 2xkx_A Disks large homolog 4; 99.8 8.2E-18 2.8E-22 186.8 25.5 228 204-453 155-396 (721)
8 3suz_A Amyloid beta A4 precurs 99.8 2.6E-20 8.9E-25 192.8 5.0 158 204-444 205-365 (388)
9 3rle_A Golgi reassembly-stacki 99.6 2.6E-15 8.8E-20 142.4 15.1 145 218-437 3-156 (209)
10 4a8c_A Periplasmic PH-dependen 99.6 4.7E-14 1.6E-18 148.0 18.0 143 232-443 263-410 (436)
11 3pv2_A DEGQ; trypsin fold, PDZ 99.5 7E-14 2.4E-18 147.3 14.4 147 232-442 282-432 (451)
12 1r6j_A Syntenin 1; PDZ, membra 99.5 1.4E-13 4.9E-18 111.7 10.5 77 203-299 4-80 (82)
13 2byg_A Channel associated prot 99.5 2E-13 7E-18 117.7 10.7 95 188-300 14-113 (117)
14 2he4_A Na(+)/H(+) exchange reg 99.5 7.9E-13 2.7E-17 108.1 12.9 85 202-301 3-87 (90)
15 2r4h_A Membrane-associated gua 99.4 4.4E-13 1.5E-17 114.6 11.3 94 188-300 14-108 (112)
16 3l4f_D SH3 and multiple ankyri 99.4 4.5E-13 1.6E-17 118.1 11.7 96 188-302 19-125 (132)
17 1v6b_A Harmonin isoform A1; st 99.4 3.7E-13 1.3E-17 116.2 10.3 104 188-302 4-108 (118)
18 1r6j_A Syntenin 1; PDZ, membra 99.4 3.3E-13 1.1E-17 109.6 9.3 69 367-443 4-72 (82)
19 1wi2_A Riken cDNA 2700099C19; 99.4 9.9E-13 3.4E-17 110.7 12.4 88 201-302 13-100 (104)
20 3gge_A PDZ domain-containing p 99.4 7.6E-13 2.6E-17 110.1 11.4 85 204-302 6-91 (95)
21 2d92_A INAD-like protein; PDZ 99.4 1.1E-12 3.6E-17 111.3 11.8 87 203-301 15-105 (108)
22 2fe5_A Presynaptic protein SAP 99.4 2E-12 6.9E-17 106.3 12.8 86 202-300 2-92 (94)
23 1g9o_A NHE-RF; PDZ domain, com 99.4 1.8E-12 6E-17 106.1 12.3 70 203-277 3-72 (91)
24 1va8_A Maguk P55 subfamily mem 99.4 2.5E-12 8.6E-17 110.0 13.6 97 190-302 12-109 (113)
25 3b76_A E3 ubiquitin-protein li 99.4 8.9E-13 3E-17 114.1 10.8 96 188-300 14-112 (118)
26 2q9v_A Membrane-associated gua 99.4 1.1E-12 3.6E-17 107.2 10.7 86 203-300 2-88 (90)
27 2dm8_A INAD-like protein; PDZ 99.4 1.8E-12 6E-17 111.0 12.4 97 188-302 7-104 (116)
28 2jik_A Synaptojanin-2 binding 99.4 1.8E-12 6.3E-17 108.2 12.1 86 204-302 8-98 (101)
29 2dkr_A LIN-7 homolog B; LIN-7B 99.4 1.3E-12 4.5E-17 107.2 11.0 85 203-301 5-90 (93)
30 2i1n_A Discs, large homolog 3; 99.4 2.3E-12 7.8E-17 107.8 12.2 88 202-302 3-95 (102)
31 2uzc_A Human pdlim5, PDZ and L 99.4 1.8E-12 6.3E-17 105.4 11.2 85 202-301 2-86 (88)
32 1uhp_A Hypothetical protein KI 99.4 2E-12 6.7E-17 109.3 11.8 89 201-302 6-102 (107)
33 1qav_A Alpha-1 syntrophin (res 99.4 1.4E-12 4.9E-17 106.5 10.5 85 203-300 4-89 (90)
34 2awx_A Synapse associated prot 99.4 2.7E-12 9.4E-17 108.1 12.5 87 203-302 3-94 (105)
35 4e34_A Golgi-associated PDZ an 99.4 1.4E-12 4.8E-17 105.8 10.2 83 204-299 3-86 (87)
36 1i16_A Interleukin 16, LCF; cy 99.4 8.2E-13 2.8E-17 115.9 9.4 89 202-302 28-119 (130)
37 2jxo_A Ezrin-radixin-moesin-bi 99.4 2.1E-12 7.2E-17 107.2 11.2 89 188-299 3-91 (98)
38 2vwr_A Ligand of NUMB protein 99.4 2.4E-12 8.3E-17 106.2 11.5 87 203-302 3-90 (95)
39 4e34_A Golgi-associated PDZ an 99.4 1.4E-12 4.8E-17 105.8 9.5 75 368-443 3-78 (87)
40 2dc2_A GOPC, golgi associated 99.4 1.6E-12 5.6E-17 109.3 10.2 87 203-302 9-96 (103)
41 1ufx_A KIAA1526 protein; PDZ d 99.4 1.7E-12 5.8E-17 109.5 10.1 91 204-302 7-98 (103)
42 2v90_A PDZ domain-containing p 99.4 4.5E-12 1.5E-16 104.8 12.5 87 203-302 3-90 (96)
43 2ego_A General receptor for ph 99.4 3.8E-12 1.3E-16 105.4 12.0 84 203-299 4-94 (96)
44 2i04_A Membrane-associated gua 99.4 3.8E-12 1.3E-16 102.8 11.6 83 205-299 2-85 (85)
45 1m5z_A GRIP, AMPA receptor int 99.4 4.4E-12 1.5E-16 103.7 12.2 85 203-300 6-90 (91)
46 3cbz_A Dishevelled-2; PDZ doma 99.4 2.5E-12 8.6E-17 109.2 11.1 92 202-302 4-97 (108)
47 1ueq_A Membrane associated gua 99.4 1.2E-11 4E-16 107.4 15.5 88 203-302 19-107 (123)
48 1kwa_A Hcask/LIN-2 protein; PD 99.4 2.6E-12 9E-17 105.0 10.8 83 204-301 2-85 (88)
49 2iwo_A Multiple PDZ domain pro 99.4 1.6E-12 5.4E-17 112.7 9.9 88 203-302 24-114 (120)
50 3qe1_A Sorting nexin-27, G pro 99.4 5.7E-12 1.9E-16 106.3 13.1 87 203-302 6-103 (107)
51 1d5g_A Human phosphatase HPTP1 99.4 8.5E-12 2.9E-16 103.0 13.8 87 203-302 5-94 (96)
52 2f5y_A Regulator of G-protein 99.4 3.3E-12 1.1E-16 104.8 11.0 83 202-302 2-84 (91)
53 2qg1_A Multiple PDZ domain pro 99.4 5.7E-12 2E-16 103.2 12.4 85 203-301 4-89 (92)
54 2q3g_A PDZ and LIM domain prot 99.4 1.9E-12 6.5E-17 105.6 9.3 83 204-301 4-86 (89)
55 1wi4_A Synip, syntaxin binding 99.4 4.6E-12 1.6E-16 107.8 12.1 89 204-302 16-106 (109)
56 3gge_A PDZ domain-containing p 99.4 2.3E-12 8E-17 107.1 9.9 73 367-443 5-78 (95)
57 2opg_A Multiple PDZ domain pro 99.4 5.6E-12 1.9E-16 104.5 12.3 86 204-302 5-91 (98)
58 1n7e_A AMPA receptor interacti 99.4 9.7E-12 3.3E-16 103.1 13.7 86 203-302 5-91 (97)
59 1rgw_A ZAsp protein; PDZ, cyph 99.4 2.4E-12 8.2E-17 103.9 9.7 82 204-300 2-83 (85)
60 1wg6_A Hypothetical protein (r 99.4 1.5E-12 5.3E-17 113.8 9.0 109 188-302 11-123 (127)
61 1uep_A Membrane associated gua 99.4 8.7E-13 3E-17 110.8 7.1 90 201-302 7-97 (103)
62 2dc2_A GOPC, golgi associated 99.4 2.1E-12 7.2E-17 108.6 9.4 76 367-443 9-85 (103)
63 1qav_A Alpha-1 syntrophin (res 99.4 2.8E-12 9.6E-17 104.8 9.9 76 367-443 4-80 (90)
64 2jil_A GRIP1 protein, glutamat 99.4 3.8E-12 1.3E-16 105.4 10.5 87 203-302 3-93 (97)
65 1ihj_A INAD; intermolecular di 99.4 4.2E-12 1.4E-16 105.3 10.8 86 203-300 5-96 (98)
66 3i4w_A Disks large homolog 4; 99.3 5.9E-12 2E-16 105.4 11.7 83 203-300 11-94 (104)
67 3r68_A Na(+)/H(+) exchange reg 99.3 3.7E-12 1.3E-16 104.9 10.1 84 203-301 5-88 (95)
68 2cs5_A Tyrosine-protein phosph 99.3 3.2E-12 1.1E-16 110.0 10.1 91 201-302 13-107 (119)
69 2eeg_A PDZ and LIM domain prot 99.3 2.8E-12 9.4E-17 105.9 9.1 85 202-301 7-91 (94)
70 3nfk_A Tyrosine-protein phosph 99.3 3.9E-12 1.3E-16 107.3 10.2 89 202-299 16-106 (107)
71 3o46_A Maguk P55 subfamily mem 99.3 8.4E-12 2.9E-16 102.6 12.0 84 203-301 4-88 (93)
72 2dls_A PDZ-rhogef, RHO guanine 99.3 5.8E-12 2E-16 103.8 11.0 81 203-302 8-88 (93)
73 1ujd_A KIAA0559 protein; PDZ d 99.3 5.7E-12 2E-16 108.4 11.2 91 202-302 11-110 (117)
74 1wha_A KIAA0147 protein, scrib 99.3 3.3E-12 1.1E-16 107.6 9.5 87 203-302 7-99 (105)
75 3b76_A E3 ubiquitin-protein li 99.3 3.3E-12 1.1E-16 110.5 9.7 76 367-443 24-103 (118)
76 2vsp_A PDZ domain-containing p 99.3 1.6E-12 5.3E-17 106.7 7.3 85 203-302 3-87 (91)
77 2eno_A Synaptojanin-2-binding 99.3 6.7E-12 2.3E-16 108.3 11.6 87 203-302 17-108 (120)
78 1q3o_A Shank1; PDZ, GKAP, pept 99.3 7.7E-12 2.6E-16 106.0 11.8 86 204-301 8-104 (109)
79 1x6d_A Interleukin-16; PDZ dom 99.3 9.6E-12 3.3E-16 107.1 12.5 88 204-302 16-104 (119)
80 3hpk_A Protein interacting wit 99.3 7.2E-12 2.5E-16 108.9 11.8 86 202-300 18-104 (125)
81 2q3g_A PDZ and LIM domain prot 99.3 3.9E-12 1.3E-16 103.7 9.4 73 370-443 4-76 (89)
82 2daz_A INAD-like protein; PDZ 99.3 6E-12 2E-16 109.3 11.1 87 203-302 25-112 (124)
83 1wf8_A Neurabin-I; PDZ domain, 99.3 6.4E-12 2.2E-16 106.1 10.8 89 201-302 7-101 (107)
84 2djt_A Unnamed protein product 99.3 9.8E-12 3.3E-16 104.3 11.8 87 203-302 11-99 (104)
85 2fne_A Multiple PDZ domain pro 99.3 2.6E-12 8.8E-17 110.9 8.3 86 203-301 25-113 (117)
86 1v62_A KIAA1719 protein; struc 99.3 1.7E-11 6E-16 105.4 13.5 88 203-302 15-103 (117)
87 2db5_A INAD-like protein; PDZ 99.3 3.7E-12 1.3E-16 111.1 9.4 88 203-302 25-116 (128)
88 2pkt_A PDZ and LIM domain prot 99.3 6.8E-12 2.3E-16 102.7 10.4 85 203-302 3-87 (91)
89 3kzd_A TIAM-1, T-lymphoma inva 99.3 8.7E-12 3E-16 103.7 11.0 85 203-299 6-90 (94)
90 2ego_A General receptor for ph 99.3 6.3E-12 2.1E-16 104.1 10.0 76 367-443 4-86 (96)
91 2dlu_A INAD-like protein; PDZ 99.3 1.7E-11 6E-16 104.0 12.9 83 204-302 16-99 (111)
92 2iwo_A Multiple PDZ domain pro 99.3 3.4E-12 1.2E-16 110.5 8.6 76 367-443 24-103 (120)
93 2pa1_A PDZ and LIM domain prot 99.3 6.9E-12 2.4E-16 101.8 9.9 83 206-301 3-85 (87)
94 1um1_A KIAA1849 protein, RSGI 99.3 1.8E-11 6.1E-16 103.8 12.8 86 203-301 8-96 (110)
95 3cbz_A Dishevelled-2; PDZ doma 99.3 2.5E-12 8.4E-17 109.2 7.4 74 367-441 5-81 (108)
96 2kpk_A Membrane-associated gua 99.3 2E-11 7E-16 106.8 13.5 88 203-302 18-106 (129)
97 2d90_A PDZ domain containing p 99.3 7.4E-12 2.5E-16 104.7 10.2 86 202-302 5-90 (102)
98 2koj_A Partitioning defective 99.3 3.2E-11 1.1E-15 102.3 14.2 98 191-302 2-102 (111)
99 2pa1_A PDZ and LIM domain prot 99.3 7.2E-12 2.5E-16 101.7 9.7 72 370-442 3-74 (87)
100 2eeh_A PDZ domain-containing p 99.3 1.1E-11 3.6E-16 103.5 11.0 86 203-302 10-95 (100)
101 2ehr_A INAD-like protein; PDZ 99.3 8.7E-12 3E-16 107.0 10.7 88 203-302 15-111 (117)
102 2kom_A Partitioning defective 99.3 2E-11 6.9E-16 105.7 13.1 99 188-300 18-119 (121)
103 2w4f_A Protein LAP4; structura 99.3 1.9E-11 6.7E-16 100.9 12.4 87 203-302 3-94 (97)
104 2ejy_A 55 kDa erythrocyte memb 99.3 9.4E-12 3.2E-16 104.0 10.5 84 202-300 11-95 (97)
105 2uzc_A Human pdlim5, PDZ and L 99.3 7.3E-12 2.5E-16 101.8 9.6 71 372-443 6-76 (88)
106 1x6d_A Interleukin-16; PDZ dom 99.3 7.5E-12 2.6E-16 107.7 10.1 76 367-443 15-92 (119)
107 1wfg_A Regulating synaptic mem 99.3 1.1E-11 3.7E-16 109.0 11.2 94 201-302 25-128 (131)
108 1rgw_A ZAsp protein; PDZ, cyph 99.3 5.6E-12 1.9E-16 101.7 8.6 71 372-443 4-74 (85)
109 1uez_A KIAA1526 protein; PDZ d 99.3 5.8E-12 2E-16 105.2 8.9 86 204-302 9-94 (101)
110 1wi2_A Riken cDNA 2700099C19; 99.3 1.3E-11 4.3E-16 103.9 11.0 74 367-441 15-88 (104)
111 2z17_A Pleckstrin homology SEC 99.3 8.8E-12 3E-16 104.8 9.8 79 188-277 9-93 (104)
112 4amh_A Disks large homolog 1; 99.3 1.3E-11 4.5E-16 104.3 10.9 78 215-302 11-93 (106)
113 1kwa_A Hcask/LIN-2 protein; PD 99.3 1.1E-11 3.6E-16 101.4 9.9 73 368-443 2-75 (88)
114 2jre_A C60-1 PDZ domain peptid 99.3 1.8E-11 6.2E-16 103.3 11.6 91 201-302 10-105 (108)
115 2eei_A PDZ domain-containing p 99.3 1.1E-11 3.9E-16 104.2 10.3 85 203-302 8-92 (106)
116 2qg1_A Multiple PDZ domain pro 99.3 1.4E-11 4.8E-16 100.9 10.6 75 367-443 4-79 (92)
117 3ngh_A PDZ domain-containing p 99.3 1.3E-11 4.3E-16 104.0 10.5 84 204-301 2-85 (106)
118 1x5q_A LAP4 protein; PDZ domai 99.3 4.8E-11 1.6E-15 101.1 14.2 86 204-302 16-106 (110)
119 1wi4_A Synip, syntaxin binding 99.3 1.1E-11 3.7E-16 105.5 10.2 73 367-442 15-90 (109)
120 3egg_C Spinophilin; PP1, serin 99.3 1.4E-11 4.8E-16 113.3 11.5 87 200-299 77-169 (170)
121 3hpk_A Protein interacting wit 99.3 1.2E-11 4E-16 107.5 10.4 76 367-443 19-95 (125)
122 3axa_A Afadin, nectin-3, prote 99.3 2.2E-11 7.6E-16 102.5 11.7 87 202-302 10-99 (106)
123 3l4f_D SH3 and multiple ankyri 99.3 6.6E-12 2.2E-16 110.6 8.5 76 367-443 27-114 (132)
124 2q9v_A Membrane-associated gua 99.3 1.4E-11 4.9E-16 100.4 10.0 72 368-441 3-75 (90)
125 1ufx_A KIAA1526 protein; PDZ d 99.3 7.8E-12 2.7E-16 105.4 8.4 72 368-441 7-80 (103)
126 2kv8_A RGS12, regulator of G-p 99.3 2.5E-12 8.7E-17 103.5 5.2 80 203-300 2-81 (83)
127 3khf_A Microtubule-associated 99.3 1.4E-11 4.8E-16 102.4 9.8 85 205-302 4-94 (99)
128 1wf7_A Enigma homologue protei 99.3 1.6E-11 5.4E-16 103.0 10.3 84 204-302 6-89 (103)
129 1nf3_C PAR-6B; semi-CRIB motif 99.3 1E-11 3.5E-16 108.6 9.4 92 199-301 25-125 (128)
130 3nfk_A Tyrosine-protein phosph 99.3 8.8E-12 3E-16 105.1 8.6 75 367-442 17-93 (107)
131 1uew_A Membrane associated gua 99.3 3.3E-11 1.1E-15 102.9 12.3 89 202-302 9-104 (114)
132 1ky9_A Protease DO, DEGP, HTRA 99.3 5.2E-13 1.8E-17 140.5 1.2 143 232-441 286-428 (448)
133 2vsv_A Rhophilin-2; scaffold p 99.3 1.9E-11 6.6E-16 104.3 10.6 83 203-302 23-105 (109)
134 1q7x_A PDZ2B domain of PTP-BAS 99.3 2.1E-11 7.1E-16 103.1 10.7 88 202-302 8-103 (108)
135 1tp5_A Presynaptic density pro 99.3 2.6E-11 9E-16 104.2 11.4 85 202-301 13-98 (119)
136 1uhp_A Hypothetical protein KI 99.3 2.4E-11 8.2E-16 102.6 10.9 75 367-443 8-91 (107)
137 2i04_A Membrane-associated gua 99.3 1.7E-11 5.7E-16 99.0 9.5 62 379-441 11-73 (85)
138 1wfv_A Membrane associated gua 99.3 4.5E-12 1.5E-16 106.0 6.3 86 203-302 11-97 (103)
139 1ihj_A INAD; intermolecular di 99.3 1.8E-11 6.1E-16 101.5 9.9 75 368-443 6-87 (98)
140 1z87_A Alpha-1-syntrophin; pro 99.3 2.4E-11 8.3E-16 119.1 12.5 87 203-302 77-164 (263)
141 1ujd_A KIAA0559 protein; PDZ d 99.3 8.7E-12 3E-16 107.2 8.1 75 368-443 13-99 (117)
142 2gzv_A PRKCA-binding protein; 99.3 5E-11 1.7E-15 102.3 12.7 91 198-301 19-110 (114)
143 1va8_A Maguk P55 subfamily mem 99.3 3.8E-11 1.3E-15 102.6 11.9 74 366-443 24-98 (113)
144 3o46_A Maguk P55 subfamily mem 99.3 2.4E-11 8.3E-16 99.9 10.2 74 367-443 4-78 (93)
145 2d92_A INAD-like protein; PDZ 99.3 1.7E-11 5.7E-16 103.9 9.4 74 367-442 15-93 (108)
146 1uju_A Scribble; PDZ domain, c 99.3 6.9E-12 2.3E-16 106.7 7.1 87 204-302 10-105 (111)
147 3sfj_A TAX1-binding protein 3; 99.3 3.8E-11 1.3E-15 100.5 11.5 86 205-299 6-103 (104)
148 1mfg_A ERB-B2 interacting prot 99.3 1.5E-11 5.2E-16 101.4 8.9 73 369-443 3-83 (95)
149 2cs5_A Tyrosine-protein phosph 99.3 9.2E-12 3.1E-16 107.2 7.8 74 367-441 15-90 (119)
150 2csj_A TJP2 protein; PDZ domai 99.3 8.9E-12 3E-16 107.0 7.7 88 202-302 13-105 (117)
151 2awx_A Synapse associated prot 99.3 2.7E-11 9.1E-16 101.9 10.4 75 367-443 3-83 (105)
152 2g5m_B Neurabin-2; spinophilin 99.2 1.6E-11 5.5E-16 104.6 9.1 88 202-302 3-96 (113)
153 2ehr_A INAD-like protein; PDZ 99.2 9.8E-12 3.4E-16 106.7 7.7 76 367-443 15-100 (117)
154 2db5_A INAD-like protein; PDZ 99.2 6.9E-12 2.4E-16 109.4 6.8 76 367-443 25-105 (128)
155 2o2t_A Multiple PDZ domain pro 99.2 1.5E-11 5.1E-16 105.4 8.8 89 202-302 19-111 (117)
156 1n7e_A AMPA receptor interacti 99.2 2.1E-11 7.1E-16 101.1 9.3 74 368-443 6-80 (97)
157 1mfg_A ERB-B2 interacting prot 99.2 2.8E-11 9.5E-16 99.8 10.0 82 205-301 5-93 (95)
158 2iwq_A Multiple PDZ domain pro 99.2 3.7E-11 1.3E-15 104.5 11.2 94 188-301 17-119 (123)
159 2jik_A Synaptojanin-2 binding 99.2 2.8E-11 9.5E-16 100.9 10.1 75 367-443 7-87 (101)
160 1q3o_A Shank1; PDZ, GKAP, pept 99.2 3E-11 1E-15 102.3 10.3 76 367-443 7-94 (109)
161 2qkv_A Inactivation-NO-after-p 99.2 5.5E-11 1.9E-15 98.6 11.7 85 201-301 6-91 (96)
162 1v62_A KIAA1719 protein; struc 99.2 2.9E-11 9.8E-16 104.0 10.3 76 367-443 15-92 (117)
163 2ejy_A 55 kDa erythrocyte memb 99.2 1.8E-11 6.3E-16 102.3 8.7 74 367-443 12-86 (97)
164 2he4_A Na(+)/H(+) exchange reg 99.2 3.5E-11 1.2E-15 98.2 10.3 74 367-443 4-77 (90)
165 2dkr_A LIN-7 homolog B; LIN-7B 99.2 2.9E-11 9.9E-16 99.1 9.8 74 368-443 6-80 (93)
166 1ueq_A Membrane associated gua 99.2 4.7E-11 1.6E-15 103.6 11.6 72 369-441 19-92 (123)
167 2vwr_A Ligand of NUMB protein 99.2 3.4E-11 1.2E-15 99.3 10.2 75 367-443 3-79 (95)
168 2pkt_A PDZ and LIM domain prot 99.2 2.9E-11 1E-15 98.9 9.7 71 372-443 6-76 (91)
169 2h2b_A Tight junction protein 99.2 5.1E-11 1.7E-15 100.4 11.5 88 202-302 6-98 (107)
170 2i1n_A Discs, large homolog 3; 99.2 3.1E-11 1.1E-15 100.8 10.1 75 367-443 4-84 (102)
171 1i16_A Interleukin 16, LCF; cy 99.2 8.4E-12 2.9E-16 109.5 6.8 75 367-443 29-107 (130)
172 2dmz_A INAD-like protein; PDZ 99.2 6.1E-11 2.1E-15 103.4 12.3 90 201-302 13-107 (129)
173 2byg_A Channel associated prot 99.2 2.7E-11 9.4E-16 104.3 9.9 75 367-443 24-104 (117)
174 3bpu_A Membrane-associated gua 99.2 2.3E-11 8E-16 98.8 9.0 84 203-301 3-86 (88)
175 1g9o_A NHE-RF; PDZ domain, com 99.2 3.9E-11 1.3E-15 98.0 10.3 73 368-443 4-76 (91)
176 2fne_A Multiple PDZ domain pro 99.2 1.9E-11 6.3E-16 105.4 8.8 75 367-443 25-103 (117)
177 2fcf_A Multiple PDZ domain pro 99.2 6.9E-11 2.3E-15 98.8 11.8 88 202-301 3-99 (103)
178 1wha_A KIAA0147 protein, scrib 99.2 1.9E-11 6.6E-16 102.8 8.4 74 369-443 7-88 (105)
179 2eeh_A PDZ domain-containing p 99.2 3.7E-11 1.3E-15 100.2 9.9 75 366-441 9-83 (100)
180 1v5q_A GRIP1 homolog, glutamat 99.2 5.9E-11 2E-15 102.8 11.5 90 203-302 15-108 (122)
181 2fe5_A Presynaptic protein SAP 99.2 4.9E-11 1.7E-15 98.0 10.4 74 368-443 4-83 (94)
182 2r4h_A Membrane-associated gua 99.2 4.7E-11 1.6E-15 101.9 10.5 75 367-443 24-99 (112)
183 1uep_A Membrane associated gua 99.2 1.6E-11 5.5E-16 103.1 7.4 73 367-441 9-82 (103)
184 3soe_A Membrane-associated gua 99.2 4.2E-11 1.4E-15 102.9 10.1 82 204-302 13-94 (113)
185 1whd_A RGS3, regulator of G-pr 99.2 2.5E-11 8.4E-16 101.4 8.5 85 200-302 12-96 (100)
186 2eno_A Synaptojanin-2-binding 99.2 3.5E-11 1.2E-15 103.7 9.7 75 367-443 17-97 (120)
187 1uju_A Scribble; PDZ domain, c 99.2 1.1E-11 3.7E-16 105.4 6.3 75 368-443 10-94 (111)
188 2eeg_A PDZ and LIM domain prot 99.2 2.1E-11 7.1E-16 100.6 7.7 73 368-443 9-81 (94)
189 4amh_A Disks large homolog 1; 99.2 2.9E-11 1E-15 102.2 8.7 67 376-443 10-82 (106)
190 2kjd_A Sodium/hydrogen exchang 99.2 7.4E-11 2.5E-15 102.6 11.5 86 201-300 7-92 (128)
191 1m5z_A GRIP, AMPA receptor int 99.2 6.8E-11 2.3E-15 96.6 10.5 75 367-443 6-81 (91)
192 2kpk_A Membrane-associated gua 99.2 4.3E-11 1.5E-15 104.7 9.8 72 369-442 20-92 (129)
193 1uit_A Human discs large 5 pro 99.2 8.6E-11 2.9E-15 100.7 11.5 83 204-302 20-102 (117)
194 1y7n_A Amyloid beta A4 precurs 99.2 1.4E-10 4.6E-15 95.5 12.1 76 205-299 13-88 (90)
195 1d5g_A Human phosphatase HPTP1 99.2 6.6E-11 2.2E-15 97.6 10.3 75 367-443 5-83 (96)
196 3axa_A Afadin, nectin-3, prote 99.2 4.6E-11 1.6E-15 100.5 9.5 74 369-443 11-88 (106)
197 3k1r_A Harmonin; protein-prote 99.2 4.3E-11 1.5E-15 111.7 10.2 86 203-302 84-169 (192)
198 1um7_A Synapse-associated prot 99.2 3.2E-11 1.1E-15 102.5 8.5 84 203-301 15-99 (113)
199 3e17_A Tight junction protein 99.2 9.1E-11 3.1E-15 95.8 10.8 79 206-302 3-82 (88)
200 1wf7_A Enigma homologue protei 99.2 1.5E-11 5.2E-16 103.1 6.3 73 368-443 6-78 (103)
201 1n7t_A 99-MER peptide of densi 99.2 4.1E-11 1.4E-15 100.4 8.8 83 204-301 12-101 (103)
202 1wfg_A Regulating synaptic mem 99.2 1E-10 3.4E-15 102.8 11.6 65 377-442 46-114 (131)
203 2opg_A Multiple PDZ domain pro 99.2 7.4E-11 2.5E-15 97.7 10.2 73 369-443 6-80 (98)
204 2jil_A GRIP1 protein, glutamat 99.2 5.9E-11 2E-15 98.1 9.5 73 369-443 5-82 (97)
205 2iwn_A Multiple PDZ domain pro 99.2 1E-10 3.5E-15 96.2 10.9 84 204-300 5-92 (97)
206 2d8i_A T-cell lymphoma invasio 99.2 5.4E-11 1.8E-15 102.3 9.4 94 197-302 9-102 (114)
207 2v90_A PDZ domain-containing p 99.2 7.2E-11 2.5E-15 97.5 9.9 74 368-443 4-79 (96)
208 1vb7_A PDZ and LIM domain 2; P 99.2 2E-11 6.7E-16 100.7 6.3 83 207-302 8-90 (94)
209 2gzv_A PRKCA-binding protein; 99.2 8.4E-11 2.9E-15 100.8 10.4 76 367-443 24-100 (114)
210 3r68_A Na(+)/H(+) exchange reg 99.2 5.8E-11 2E-15 97.7 9.0 73 368-443 6-78 (95)
211 2o2t_A Multiple PDZ domain pro 99.2 2.7E-11 9.3E-16 103.8 7.1 76 367-443 20-100 (117)
212 1z87_A Alpha-1-syntrophin; pro 99.2 2.1E-11 7.1E-16 119.6 7.1 76 367-443 77-153 (263)
213 1x5n_A Harmonin; PDZ domain, u 99.2 6.3E-11 2.2E-15 101.0 9.3 83 204-300 16-98 (114)
214 1wf8_A Neurabin-I; PDZ domain, 99.2 7.4E-11 2.5E-15 99.5 9.5 74 368-443 10-90 (107)
215 2vz5_A TAX1-binding protein 3; 99.2 1.9E-10 6.4E-15 102.2 12.6 91 203-302 23-125 (139)
216 2la8_A Inactivation-NO-after-p 99.2 8.6E-11 2.9E-15 99.5 9.9 83 204-302 3-86 (106)
217 2lob_A Golgi-associated PDZ an 98.8 2.4E-12 8.4E-17 110.2 0.0 85 188-277 14-99 (112)
218 2djt_A Unnamed protein product 99.2 8.9E-11 3E-15 98.4 9.6 74 368-443 12-88 (104)
219 1um1_A KIAA1849 protein, RSGI 99.2 1.1E-10 3.7E-15 98.9 10.2 74 368-443 9-86 (110)
220 2z17_A Pleckstrin homology SEC 99.2 7.4E-11 2.5E-15 99.1 9.0 76 367-443 15-97 (104)
221 3qe1_A Sorting nexin-27, G pro 99.2 1.3E-10 4.3E-15 97.9 10.4 75 367-443 6-92 (107)
222 2yt7_A Amyloid beta A4 precurs 99.2 1.5E-10 5.2E-15 96.8 10.7 88 204-301 10-99 (101)
223 1wg6_A Hypothetical protein (r 99.2 5.7E-11 2E-15 103.8 8.4 72 369-441 25-103 (127)
224 3egg_C Spinophilin; PP1, serin 99.2 9.1E-11 3.1E-15 107.8 10.1 74 368-443 81-161 (170)
225 3tsv_A Tight junction protein 99.2 1.9E-10 6.5E-15 100.1 11.7 83 204-301 30-112 (124)
226 2edz_A PDZ domain-containing p 99.2 8.1E-11 2.8E-15 100.5 9.1 86 202-301 12-97 (114)
227 2csj_A TJP2 protein; PDZ domai 99.2 4.7E-11 1.6E-15 102.5 7.6 75 367-443 14-94 (117)
228 1n7t_A 99-MER peptide of densi 99.2 2.3E-11 7.9E-16 101.9 5.6 73 369-443 11-91 (103)
229 2e7k_A Maguk P55 subfamily mem 99.2 6.6E-11 2.2E-15 97.3 8.1 80 204-300 7-87 (91)
230 3ngh_A PDZ domain-containing p 99.2 8.4E-11 2.9E-15 98.9 8.9 74 368-443 2-75 (106)
231 3i4w_A Disks large homolog 4; 99.2 1.4E-10 4.7E-15 97.0 10.2 74 367-443 11-85 (104)
232 1nf3_C PAR-6B; semi-CRIB motif 99.2 8.3E-11 2.8E-15 102.8 9.1 76 367-443 29-115 (128)
233 1uez_A KIAA1526 protein; PDZ d 99.2 5.5E-11 1.9E-15 99.2 7.5 75 367-442 8-83 (101)
234 2la8_A Inactivation-NO-after-p 99.2 5.2E-11 1.8E-15 100.9 7.4 72 368-443 3-75 (106)
235 2e7k_A Maguk P55 subfamily mem 99.2 7.8E-11 2.7E-15 96.8 8.2 72 367-443 6-78 (91)
236 2eaq_A LIM domain only protein 99.1 1.3E-10 4.5E-15 94.6 9.4 85 204-300 4-88 (90)
237 2edp_A Fragment, shroom family 99.1 5.7E-11 1.9E-15 99.2 7.3 75 367-443 9-84 (100)
238 1vb7_A PDZ and LIM domain 2; P 99.1 2.7E-11 9.2E-16 99.9 5.3 73 369-442 6-78 (94)
239 2fcf_A Multiple PDZ domain pro 99.1 1.4E-10 4.6E-15 97.0 9.6 75 368-443 5-89 (103)
240 1uew_A Membrane associated gua 99.1 8.4E-11 2.9E-15 100.4 8.5 76 367-443 10-93 (114)
241 2jre_A C60-1 PDZ domain peptid 99.1 1.8E-10 6.3E-15 97.1 10.5 76 367-443 12-94 (108)
242 1uf1_A KIAA1526 protein; PDZ d 99.1 5E-10 1.7E-14 97.5 13.5 86 203-302 20-105 (128)
243 3e17_A Tight junction protein 99.1 1.5E-10 5.2E-15 94.4 9.5 66 371-443 4-71 (88)
244 1qau_A Neuronal nitric oxide s 99.1 2.3E-10 7.8E-15 97.1 11.0 85 204-301 2-87 (112)
245 2yuy_A RHO GTPase activating p 99.1 2.1E-11 7.1E-16 106.3 4.4 86 204-302 9-121 (126)
246 2edp_A Fragment, shroom family 99.1 4.9E-11 1.7E-15 99.6 6.5 83 205-301 11-94 (100)
247 2yt7_A Amyloid beta A4 precurs 99.1 1.4E-10 4.9E-15 96.9 9.3 75 366-441 8-85 (101)
248 2lob_A Golgi-associated PDZ an 98.7 4.6E-12 1.6E-16 108.5 0.0 76 367-443 27-103 (112)
249 2qkv_A Inactivation-NO-after-p 99.1 1.4E-10 4.8E-15 96.1 9.0 73 367-443 8-81 (96)
250 1v6b_A Harmonin isoform A1; st 99.1 9.1E-11 3.1E-15 101.1 8.1 65 376-441 25-91 (118)
251 3k1r_A Harmonin; protein-prote 99.1 1.1E-10 3.6E-15 109.0 9.0 75 367-443 84-158 (192)
252 2daz_A INAD-like protein; PDZ 99.1 1.6E-10 5.4E-15 100.2 9.5 75 367-443 25-101 (124)
253 2iwq_A Multiple PDZ domain pro 99.1 1.5E-10 5E-15 100.7 9.2 76 367-443 24-109 (123)
254 2f5y_A Regulator of G-protein 99.1 2.2E-10 7.4E-15 93.8 9.5 70 368-443 4-73 (91)
255 1ujv_A Membrane associated gua 99.1 3.2E-10 1.1E-14 94.1 10.6 82 204-302 11-92 (96)
256 2w4f_A Protein LAP4; structura 99.1 2.8E-10 9.7E-15 93.9 10.3 73 369-443 5-83 (97)
257 1uf1_A KIAA1526 protein; PDZ d 99.1 2E-10 6.9E-15 100.0 9.9 75 368-443 21-95 (128)
258 1v5q_A GRIP1 homolog, glutamat 99.1 9.3E-11 3.2E-15 101.5 7.6 74 367-441 15-93 (122)
259 2g5m_B Neurabin-2; spinophilin 99.1 1.5E-10 5.2E-15 98.5 8.8 72 371-443 6-85 (113)
260 2dmz_A INAD-like protein; PDZ 99.1 1.8E-10 6.2E-15 100.4 9.4 76 367-443 15-96 (129)
261 1wfv_A Membrane associated gua 99.1 3.4E-11 1.2E-15 100.6 4.5 64 379-443 22-86 (103)
262 1wif_A RSGI RUH-020, riken cDN 99.1 2.3E-10 7.9E-15 100.1 9.8 83 203-300 27-110 (126)
263 1x5q_A LAP4 protein; PDZ domai 99.1 3.6E-10 1.2E-14 95.7 10.7 72 371-443 17-95 (110)
264 2h2b_A Tight junction protein 99.1 1.9E-10 6.7E-15 96.8 8.6 75 367-443 7-87 (107)
265 4fln_A Protease DO-like 2, chl 99.1 9.2E-10 3.1E-14 117.9 15.9 164 231-443 276-462 (539)
266 3sfj_A TAX1-binding protein 3; 99.1 2.3E-10 7.8E-15 95.8 8.8 72 369-441 6-92 (104)
267 1x5n_A Harmonin; PDZ domain, u 99.1 1.6E-10 5.4E-15 98.5 7.9 74 368-442 16-89 (114)
268 2vsp_A PDZ domain-containing p 99.1 9.8E-11 3.3E-15 95.8 6.2 73 368-443 4-76 (91)
269 2koj_A Partitioning defective 99.1 4.1E-10 1.4E-14 95.4 10.3 72 369-441 11-87 (111)
270 1uit_A Human discs large 5 pro 99.1 2.3E-10 7.8E-15 98.1 8.7 72 368-443 20-91 (117)
271 1q7x_A PDZ2B domain of PTP-BAS 99.1 1.6E-10 5.4E-15 97.6 7.6 75 367-443 9-92 (108)
272 3kzd_A TIAM-1, T-lymphoma inva 99.1 3.3E-10 1.1E-14 94.1 9.1 73 367-440 6-81 (94)
273 1v5l_A PDZ and LIM domain 3; a 99.1 4.2E-11 1.4E-15 100.5 3.6 83 205-302 7-89 (103)
274 1vae_A Rhophilin 2, rhophilin, 99.1 8.6E-11 2.9E-15 100.4 5.5 82 204-302 16-97 (111)
275 2jxo_A Ezrin-radixin-moesin-bi 99.1 5.9E-10 2E-14 92.3 10.4 72 368-442 10-81 (98)
276 2dlu_A INAD-like protein; PDZ 99.1 2.5E-10 8.7E-15 96.8 8.1 72 368-443 16-88 (111)
277 2iwn_A Multiple PDZ domain pro 99.1 5.8E-10 2E-14 91.7 10.0 72 371-443 6-83 (97)
278 2edv_A FERM and PDZ domain-con 99.1 5.2E-11 1.8E-15 98.8 3.3 81 204-301 9-89 (96)
279 2eei_A PDZ domain-containing p 99.1 2.5E-10 8.5E-15 96.0 7.4 74 367-443 8-81 (106)
280 2kv8_A RGS12, regulator of G-p 99.1 6.3E-11 2.2E-15 95.2 3.4 70 368-443 3-72 (83)
281 2d90_A PDZ domain containing p 99.1 2.7E-10 9.2E-15 95.1 7.3 74 367-443 6-79 (102)
282 3gsl_A Disks large homolog 4; 99.0 6E-10 2E-14 102.8 10.2 75 367-443 5-85 (196)
283 1y7n_A Amyloid beta A4 precurs 99.0 7.5E-10 2.6E-14 90.9 9.7 68 368-443 12-80 (90)
284 2qt5_A Glutamate receptor-inte 99.0 6E-10 2E-14 104.0 10.0 76 367-443 7-83 (200)
285 1v5l_A PDZ and LIM domain 3; a 99.0 4.1E-11 1.4E-15 100.6 1.7 68 375-443 11-78 (103)
286 2qbw_A PDZ-fibronectin fusion 99.0 6.7E-10 2.3E-14 103.1 10.2 80 217-297 2-92 (195)
287 3khf_A Microtubule-associated 99.0 4.4E-10 1.5E-14 93.2 8.0 71 371-443 6-83 (99)
288 2dm8_A INAD-like protein; PDZ 99.0 2.1E-10 7.2E-15 98.0 6.2 74 368-443 18-93 (116)
289 1tp5_A Presynaptic density pro 99.0 9.2E-10 3.1E-14 94.5 10.1 74 367-443 14-88 (119)
290 2vsv_A Rhophilin-2; scaffold p 99.0 6.5E-10 2.2E-14 94.8 8.8 70 368-443 24-93 (109)
291 1b8q_A Protein (neuronal nitri 99.0 3.7E-10 1.3E-14 98.1 7.3 87 203-302 8-95 (127)
292 3qik_A Phosphatidylinositol 3, 99.0 1.1E-09 3.7E-14 92.0 9.7 82 204-299 18-99 (101)
293 2kom_A Partitioning defective 99.0 1.3E-09 4.4E-14 94.2 10.5 72 369-441 30-106 (121)
294 3soe_A Membrane-associated gua 99.0 8.4E-10 2.9E-14 94.7 8.7 68 367-441 12-79 (113)
295 3tsv_A Tight junction protein 99.0 9.3E-10 3.2E-14 95.7 9.1 64 374-440 34-97 (124)
296 2dls_A PDZ-rhogef, RHO guanine 99.0 6.3E-10 2.2E-14 91.5 7.5 68 367-440 8-75 (93)
297 2edz_A PDZ domain-containing p 99.0 4.8E-10 1.6E-14 95.7 6.9 75 367-443 13-87 (114)
298 2d8i_A T-cell lymphoma invasio 99.0 3.3E-10 1.1E-14 97.3 5.9 74 367-441 15-91 (114)
299 1um7_A Synapse-associated prot 99.0 1.6E-10 5.5E-15 98.1 3.7 74 367-443 15-89 (113)
300 3r0h_A INAD, inactivation-NO-a 99.0 1.8E-09 6.1E-14 100.9 11.2 75 368-444 19-98 (206)
301 1whd_A RGS3, regulator of G-pr 99.0 5E-10 1.7E-14 93.4 6.1 70 369-443 15-85 (100)
302 2krg_A Na(+)/H(+) exchange reg 99.0 5.9E-10 2E-14 106.3 7.3 73 200-277 6-78 (216)
303 3shw_A Tight junction protein 99.0 1.4E-09 4.7E-14 114.7 10.8 82 204-300 2-83 (468)
304 2vz5_A TAX1-binding protein 3; 99.0 1.4E-09 4.9E-14 96.5 8.3 73 367-440 23-110 (139)
305 1qau_A Neuronal nitric oxide s 98.9 3.2E-09 1.1E-13 90.0 10.0 71 369-441 3-74 (112)
306 2eaq_A LIM domain only protein 98.9 2.9E-09 9.8E-14 86.6 9.3 68 369-440 5-74 (90)
307 3cyy_A Tight junction protein 98.9 7.6E-09 2.6E-13 84.3 11.8 79 205-301 4-83 (92)
308 3tsz_A Tight junction protein 98.9 2.3E-09 7.8E-14 110.9 10.8 83 203-300 9-91 (391)
309 2yub_A LIMK-2, LIM domain kina 98.9 5.3E-09 1.8E-13 90.3 11.0 88 205-302 14-106 (118)
310 1wh1_A KIAA1095 protein; PDZ d 98.9 4.4E-09 1.5E-13 91.2 10.1 87 204-302 20-108 (124)
311 2kjd_A Sodium/hydrogen exchang 98.9 4.6E-09 1.6E-13 91.1 10.3 72 368-442 10-81 (128)
312 2yuy_A RHO GTPase activating p 98.9 4.9E-10 1.7E-14 97.5 3.9 74 368-443 9-110 (126)
313 2qbw_A PDZ-fibronectin fusion 98.9 1.5E-09 5.2E-14 100.6 7.1 63 379-443 2-72 (195)
314 2rcz_A Tight junction protein 98.9 1.2E-08 3.9E-13 80.8 11.2 68 216-300 12-80 (81)
315 3tsz_A Tight junction protein 98.9 1.6E-09 5.5E-14 112.0 7.8 70 369-443 11-82 (391)
316 3bpu_A Membrane-associated gua 98.9 2.8E-09 9.5E-14 86.4 7.6 68 368-440 4-71 (88)
317 2edv_A FERM and PDZ domain-con 98.9 5.5E-10 1.9E-14 92.5 3.2 70 368-443 9-79 (96)
318 3shw_A Tight junction protein 98.9 1.3E-09 4.5E-14 114.8 6.4 67 369-440 3-69 (468)
319 1ujv_A Membrane associated gua 98.9 4E-09 1.4E-13 87.4 7.9 66 368-441 11-77 (96)
320 2rcz_A Tight junction protein 98.9 9.3E-09 3.2E-13 81.4 9.1 60 376-442 10-70 (81)
321 1vae_A Rhophilin 2, rhophilin, 98.9 1.4E-09 4.8E-14 92.9 4.4 69 369-443 17-85 (111)
322 1p1d_A PDZ45, glutamate recept 98.9 4.4E-09 1.5E-13 97.9 8.1 74 367-441 6-84 (196)
323 1wif_A RSGI RUH-020, riken cDN 98.8 1.9E-09 6.4E-14 94.3 4.3 67 369-441 29-97 (126)
324 3cyy_A Tight junction protein 98.8 1.6E-08 5.6E-13 82.2 9.7 58 379-443 15-73 (92)
325 1b8q_A Protein (neuronal nitri 98.8 3.5E-09 1.2E-13 91.9 5.2 73 367-441 8-81 (127)
326 1w9e_A Syntenin 1; cell adhesi 98.8 1.8E-08 6.3E-13 91.3 9.9 72 367-442 4-75 (166)
327 3qik_A Phosphatidylinositol 3, 98.8 1.7E-08 5.7E-13 84.7 8.2 60 377-440 26-85 (101)
328 3suz_A Amyloid beta A4 precurs 98.7 7.8E-09 2.7E-13 106.7 3.5 76 366-442 203-281 (388)
329 2krg_A Na(+)/H(+) exchange reg 98.7 2.1E-08 7.3E-13 95.5 6.2 74 367-443 9-82 (216)
330 2yub_A LIMK-2, LIM domain kina 98.6 1.8E-08 6.2E-13 86.9 5.0 64 379-443 27-95 (118)
331 1wh1_A KIAA1095 protein; PDZ d 98.6 4.1E-08 1.4E-12 85.0 6.9 60 379-441 32-94 (124)
332 1fc6_A Photosystem II D1 prote 98.6 4.8E-08 1.6E-12 100.6 6.2 105 188-300 62-172 (388)
333 2i6v_A General secretion pathw 98.5 3E-07 1E-11 74.5 7.2 44 232-277 19-62 (87)
334 2pzd_A Serine protease HTRA2; 98.4 9.6E-07 3.3E-11 74.7 9.7 67 231-299 34-100 (113)
335 2p3w_A Probable serine proteas 98.4 1.1E-06 3.9E-11 74.2 9.1 66 231-298 34-99 (112)
336 2i4s_A General secretion pathw 98.3 1.9E-06 6.6E-11 72.2 9.2 37 233-269 38-74 (105)
337 3i18_A LMO2051 protein; alpha- 98.3 8.3E-07 2.8E-11 73.8 6.6 44 231-277 6-49 (100)
338 2l97_A HTRA, putative serine p 98.3 1.3E-06 4.3E-11 76.7 7.9 66 231-299 56-124 (134)
339 3id1_A Regulator of sigma E pr 98.3 1.3E-06 4.6E-11 72.0 6.8 58 234-301 4-61 (95)
340 2zpm_A Regulator of sigma E pr 98.2 1.7E-06 5.9E-11 70.1 6.7 63 233-297 5-69 (91)
341 2i6v_A General secretion pathw 98.2 6.4E-07 2.2E-11 72.5 3.5 45 393-440 19-63 (87)
342 2kl1_A YLBL protein; structure 98.2 9.9E-07 3.4E-11 72.6 4.0 65 232-299 5-72 (94)
343 2kjp_A Uncharacterized protein 98.2 4.7E-07 1.6E-11 74.3 1.7 59 233-302 2-60 (91)
344 4fgm_A Aminopeptidase N family 98.1 6.7E-06 2.3E-10 89.3 10.1 80 217-300 485-564 (597)
345 2pzd_A Serine protease HTRA2; 98.1 3.7E-06 1.3E-10 71.1 6.4 46 392-440 34-79 (113)
346 3id1_A Regulator of sigma E pr 98.1 4.8E-06 1.6E-10 68.6 5.8 43 395-440 4-46 (95)
347 3k50_A Putative S41 protease; 98.1 7.3E-06 2.5E-10 84.9 8.6 59 216-277 73-132 (403)
348 3rle_A Golgi reassembly-stacki 98.0 4.5E-06 1.6E-10 78.5 6.2 52 381-432 4-56 (209)
349 2p3w_A Probable serine proteas 98.0 7.3E-06 2.5E-10 69.2 6.7 47 392-441 34-80 (112)
350 1y8t_A Hypothetical protein RV 98.0 8.5E-06 2.9E-10 81.6 8.1 57 217-277 229-285 (324)
351 1lcy_A HTRA2 serine protease; 98.0 1.1E-05 3.7E-10 81.0 8.8 65 232-298 256-320 (325)
352 3stj_A Protease DEGQ; serine p 98.0 7.2E-06 2.4E-10 83.2 7.5 65 232-298 263-330 (345)
353 2i4s_A General secretion pathw 98.0 4.9E-06 1.7E-10 69.7 5.2 47 393-439 37-83 (105)
354 2zpm_A Regulator of sigma E pr 98.0 4E-06 1.4E-10 67.9 4.2 46 393-441 4-49 (91)
355 2l97_A HTRA, putative serine p 98.0 6.3E-06 2.1E-10 72.2 5.8 45 393-441 57-101 (134)
356 3i18_A LMO2051 protein; alpha- 98.0 4.8E-06 1.6E-10 69.1 4.7 44 393-440 7-50 (100)
357 2kjp_A Uncharacterized protein 97.9 1.1E-06 3.9E-11 71.9 -0.4 44 394-441 2-45 (91)
358 2hga_A Conserved protein MTH13 97.9 1.3E-05 4.3E-10 69.7 6.1 56 231-297 24-79 (125)
359 2kl1_A YLBL protein; structure 97.9 4.1E-06 1.4E-10 68.9 2.1 45 393-441 5-49 (94)
360 1fc6_A Photosystem II D1 prote 97.9 2.1E-05 7.3E-10 80.8 7.7 60 380-440 86-145 (388)
361 1te0_A Protease DEGS; two doma 97.9 1.4E-05 4.9E-10 79.8 6.1 45 231-277 243-287 (318)
362 4a8c_A Periplasmic PH-dependen 97.8 5.5E-05 1.9E-09 79.0 9.1 65 232-298 363-428 (436)
363 3qo6_A Protease DO-like 1, chl 97.7 3E-05 1E-09 78.5 6.6 44 232-277 251-305 (348)
364 3stj_A Protease DEGQ; serine p 97.7 5.7E-05 1.9E-09 76.5 7.7 45 393-440 263-307 (345)
365 3pv2_A DEGQ; trypsin fold, PDZ 97.7 6.7E-05 2.3E-09 78.7 8.5 44 232-277 386-429 (451)
366 1te0_A Protease DEGS; two doma 97.6 4.9E-05 1.7E-09 75.9 6.0 45 393-440 244-288 (318)
367 2hga_A Conserved protein MTH13 97.6 4.2E-05 1.5E-09 66.3 4.1 44 393-440 25-68 (125)
368 3num_A Serine protease HTRA1; 97.6 1E-05 3.4E-10 81.4 0.0 57 232-301 254-310 (332)
369 1y8t_A Hypothetical protein RV 97.5 8.7E-05 3E-09 74.1 6.4 58 379-440 229-286 (324)
370 1lcy_A HTRA2 serine protease; 97.5 7.8E-05 2.7E-09 74.7 6.1 46 393-441 256-301 (325)
371 1k32_A Tricorn protease; prote 97.5 0.00012 4.2E-09 83.5 8.2 56 215-277 735-800 (1045)
372 3k50_A Putative S41 protease; 97.5 9.9E-05 3.4E-09 76.4 6.0 58 379-440 74-133 (403)
373 4fgm_A Aminopeptidase N family 97.5 0.00012 4E-09 79.5 6.4 54 379-436 485-538 (597)
374 3qo6_A Protease DO-like 1, chl 97.2 0.0002 6.7E-09 72.5 4.2 45 393-440 251-306 (348)
375 3num_A Serine protease HTRA1; 97.1 7.3E-05 2.5E-09 75.1 0.0 45 393-440 254-298 (332)
376 1ky9_A Protease DO, DEGP, HTRA 97.1 7.8E-05 2.7E-09 78.2 0.0 58 232-301 383-440 (448)
377 1k32_A Tricorn protease; prote 96.2 0.0036 1.2E-07 71.3 5.3 55 380-441 738-802 (1045)
378 4fln_A Protease DO-like 2, chl 95.9 0.011 3.7E-07 63.3 6.9 54 231-286 414-467 (539)
379 3dor_A Protein CT_858, CPAF; m 38.4 19 0.00065 38.5 3.5 32 393-428 96-127 (583)
380 3dor_A Protein CT_858, CPAF; m 31.8 39 0.0013 36.1 4.6 30 233-266 97-126 (583)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.92 E-value=9.9e-24 Score=196.08 Aligned_cols=166 Identities=23% Similarity=0.407 Sum_probs=136.3
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCC----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
+..++|+|.|+. .||||+|.++.+.. ..+++|..|.+++||+++| |+.||+|++|||+++.++++.+++..+
T Consensus 4 ~~~~~v~l~~~~---~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (196)
T 3gsl_A 4 MEYEEITLERGN---SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 80 (196)
T ss_dssp EEEEEEEEECBT---TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cEEEEEEEEECC---CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456889999985 78999999987642 4689999999999999999 999999999999999999998888875
Q ss_pred hhcCcccceEeecCcEEEEEEECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPR 356 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 356 (469)
+ ..+..+.|+|.+.....
T Consensus 81 ~----------~~g~~v~l~v~r~~~~~---------------------------------------------------- 98 (196)
T 3gsl_A 81 K----------EAGSIVRLYVMRRKPPA---------------------------------------------------- 98 (196)
T ss_dssp H----------TSCSEEEEEEEEECCCC----------------------------------------------------
T ss_pred H----------hCCCcEEEEEEecCCCc----------------------------------------------------
Confidence 4 44788999988753210
Q ss_pred CccccCCCCCcceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcch
Q psy14977 357 WNYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSD 430 (469)
Q Consensus 357 ~~~~~~~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~ 430 (469)
.....+++... ..+|||.+.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++
T Consensus 99 ---------~~~~~v~l~~~-~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~- 167 (196)
T 3gsl_A 99 ---------EKVMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVM- 167 (196)
T ss_dssp ---------EEEEEEEEEEB-TTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCB-
T ss_pred ---------cccEEEEEecC-CCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCC-
Confidence 01233444332 24899999876542 3589999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHhCCC
Q psy14977 431 HDKDFDTVISFSH 443 (469)
Q Consensus 431 h~eav~~Lk~~g~ 443 (469)
+++++++|++.++
T Consensus 168 ~~~~~~~l~~~~~ 180 (196)
T 3gsl_A 168 HEDAVAALKNTYD 180 (196)
T ss_dssp HHHHHHHHHSCCE
T ss_pred HHHHHHHHHcCCC
Confidence 9999999997654
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.92 E-value=2.1e-23 Score=196.36 Aligned_cols=173 Identities=18% Similarity=0.220 Sum_probs=139.1
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCC-CcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPG-VGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFT 265 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~-~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~ 265 (469)
||+..+..+.+ ..+|+|.|.. .||||+|.++.+... .+++|..|.+++||+++| |+.||+|++|||+++.
T Consensus 8 dp~~~~~~~~~-----~~~v~~~~~~---~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~ 79 (206)
T 3r0h_A 8 EPATAEIKPNK-----KILIELKVEK---KPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIH 79 (206)
T ss_dssp CTTTCCCCTTS-----CEEEEEECTT---SCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECC
T ss_pred CCCcCCCCCCC-----EEEEEEEeCC---CCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcC
Confidence 77777666543 3678888864 899999999887522 589999999999999999 9999999999999999
Q ss_pred C--CCHHHHHHHhhhcCcccceEeecCcE-EEEEEECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccC
Q psy14977 266 G--ISHEEALKMCFFEGYKEGQMLKSNRE-LSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYAR 342 (469)
Q Consensus 266 ~--~s~~~av~~ir~~~~~~~~Ilr~g~~-v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~ 342 (469)
+ +++.+++..++ ..+.. +.|+|.|.....
T Consensus 80 ~~~~~~~~~~~~~~----------~~~~~~v~l~v~R~~~~~-------------------------------------- 111 (206)
T 3r0h_A 80 VGSMTTLKVHQLFH----------TTYEKAVTLTVFRADPPE-------------------------------------- 111 (206)
T ss_dssp GGGSCHHHHHHHHH----------SCCSSEEEEEEECCSSCC--------------------------------------
T ss_pred CCccCHHHHHHHHH----------hcCCCceEEEEEecccCC--------------------------------------
Confidence 9 89999988855 33344 889988754310
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCcceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEe
Q psy14977 343 SVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQF 421 (469)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VN 421 (469)
.....+++......+|||.+.... .|++|.+|.++|+|+++| |++||+|++||
T Consensus 112 -----------------------~~~~~v~l~~~~~~~lG~~~~~~~---~gv~V~~V~~gs~A~~aG~L~~GD~Il~VN 165 (206)
T 3r0h_A 112 -----------------------LEKFNVDLMKKAGKELGLSLSPNE---IGCTIADLIQGQYPEIDSKLQRGDIITKFN 165 (206)
T ss_dssp -----------------------EEEEEEEEECCTTCCCCEEEEECS---SCEEEEEECTTSCHHHHHHCCTTCEEEEET
T ss_pred -----------------------CcEEEEEEecCCCCccCeEEEcCC---ceEEEEEECCCChHHHcCCCCCCCEEEEEC
Confidence 012334443333458999998443 689999999999999999 99999999999
Q ss_pred cEEecCcchHHHHHHHHHhCCC
Q psy14977 422 IKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 422 G~sv~~~s~h~eav~~Lk~~g~ 443 (469)
|++|.+++ +++++++|++.++
T Consensus 166 g~~v~~~~-~~~~~~~l~~~~~ 186 (206)
T 3r0h_A 166 GDALEGLP-FQVCYALFKGANG 186 (206)
T ss_dssp TEECTTCC-HHHHHHHHHTCCS
T ss_pred CEECCCCC-HHHHHHHHHcCCC
Confidence 99999999 9999999998765
No 3
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.88 E-value=2e-21 Score=182.42 Aligned_cols=172 Identities=23% Similarity=0.345 Sum_probs=134.4
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+.|+|.|.. ..+|||+|.++.+. ..+++|..|.+++||+++ ||+.||+|++|||+++.+++|.+++.+++
T Consensus 8 ~~~v~l~~~~--~~~lG~~i~~~~~~-~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~----- 79 (200)
T 2qt5_A 8 STVVELMKKE--GTTLGLTVSGGIDK-DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLK----- 79 (200)
T ss_dssp EEEEEEECCT--TCCCCEEEECCTTS-SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHH-----
T ss_pred CEEEEEEeCC--CCCCCEEEecccCC-CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 5778888864 58999999998775 568999999999999999 89999999999999999999999998854
Q ss_pred cceEeecCcEEEEEEECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCccccC
Q psy14977 283 EGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSAR 362 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (469)
..+..+.|+|.|...+... . +.
T Consensus 80 -----~~g~~v~l~v~R~~~~~~~---------~--------------g~------------------------------ 101 (200)
T 2qt5_A 80 -----NVGERVVLEVEYELPPVSI---------Q--------------GS------------------------------ 101 (200)
T ss_dssp -----TCCSEEEEEEEEECCCCCC---------C--------------CS------------------------------
T ss_pred -----hCCCeEEEEEeccCCCccc---------C--------------CC------------------------------
Confidence 3477889998875431100 0 00
Q ss_pred CCCCcceEEEEEecCCCcccEEEeccccc----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHH
Q psy14977 363 SSKDTVRKVELNIEPGQSLGLMIRGGVEY----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDT 437 (469)
Q Consensus 363 ~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~ 437 (469)
........+++. +....|||.+.++... ..+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++
T Consensus 102 ~~~~~~~~v~l~-~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~-~~~~~~~ 179 (200)
T 2qt5_A 102 SVMFRTVEVTLH-KEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTT-HAEAMSI 179 (200)
T ss_dssp SEEEEEEEEEEE-CBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHH
T ss_pred ccceeEEEEEEe-cCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHH
Confidence 000012333332 2345899999876532 3589999999999999999 9999999999999999888 9999999
Q ss_pred HHhCCC
Q psy14977 438 VISFSH 443 (469)
Q Consensus 438 Lk~~g~ 443 (469)
|+..++
T Consensus 180 l~~~~~ 185 (200)
T 2qt5_A 180 LKQCGQ 185 (200)
T ss_dssp HHTTCS
T ss_pred HHcCCC
Confidence 998443
No 4
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.86 E-value=2.3e-20 Score=174.94 Aligned_cols=173 Identities=23% Similarity=0.268 Sum_probs=134.5
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCC---CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANN---PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~---~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
..++|+|.|++ ..||||+|.++.+. ...+++|..|.+++||+++| |+.||+|++|||+++.++++.++..+|+.
T Consensus 6 ~~~~v~l~~~~--~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 6 ETTEVVLTADP--VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp EEEEEEEECBT--TTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred EEEEEEEEeCC--CCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45778888875 58999999998543 14589999999999999999 99999999999999999889999988652
Q ss_pred cCcccceEeecCcEEEEEEECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCc
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWN 358 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 358 (469)
...+..+.|+|.|....... +
T Consensus 84 --------~~~g~~v~l~v~R~~~~~~~------------------------------~--------------------- 104 (196)
T 1p1d_A 84 --------SSITSKVTLEIEFDVAESVI------------------------------P--------------------- 104 (196)
T ss_dssp --------CCSSSEEEEEEEECSCSCCB------------------------------C---------------------
T ss_pred --------CCCCCeEEEEEEecCCCCCC------------------------------C---------------------
Confidence 12267899999875431100 0
Q ss_pred cccCCCCCcceEEEEEecCCCcccEEEeccccc--CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHH
Q psy14977 359 YSARSSKDTVRKVELNIEPGQSLGLMIRGGVEY--NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDF 435 (469)
Q Consensus 359 ~~~~~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~--~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav 435 (469)
......+.+.......|||.+...... ..+++|..|.++++|+++| |++||+|++|||+++.+++ +++++
T Consensus 105 ------~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~-~~~~~ 177 (196)
T 1p1d_A 105 ------SSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCS-MEDAV 177 (196)
T ss_dssp ------CSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCC-HHHHH
T ss_pred ------CCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCC-HHHHH
Confidence 001133444322335789998865321 3689999999999999999 9999999999999999998 99999
Q ss_pred HHHHhCCC
Q psy14977 436 DTVISFSH 443 (469)
Q Consensus 436 ~~Lk~~g~ 443 (469)
++|+..++
T Consensus 178 ~~l~~~~~ 185 (196)
T 1p1d_A 178 QILQQCED 185 (196)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCCC
Confidence 99988643
No 5
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.85 E-value=2.6e-20 Score=206.81 Aligned_cols=179 Identities=21% Similarity=0.348 Sum_probs=142.4
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCC----CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCE
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANN----PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGI 262 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~----~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~ 262 (469)
.|++.|+.. ....+..++|+|.|+. .||||+|.||.+. ...+++|..|.+++||+++| |+.||+|++|||+
T Consensus 45 ~~~s~~~~~-~~~~~~~~~v~l~k~~---~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~ 120 (721)
T 2xkx_A 45 LEAPGYVNG-TEGEMEYEEITLERGN---SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEV 120 (721)
T ss_pred cCcccccCC-CCCCceEEEEEEEeCC---CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCE
Confidence 344555432 2345667899999986 6999999998864 14689999999999999999 9999999999999
Q ss_pred EcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccC
Q psy14977 263 PFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYAR 342 (469)
Q Consensus 263 ~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~ 342 (469)
++.+++|.+++.+|+ ..+..|.|+|.+.....
T Consensus 121 ~v~~~~~~~~~~~l~----------~~g~~v~l~v~R~~~~~-------------------------------------- 152 (721)
T 2xkx_A 121 DVREVTHSAAVEALK----------EAGSIVRLYVMRRKPPA-------------------------------------- 152 (721)
T ss_pred ECCCCCHHHHHHHhh----------ccccccceEEEeccccc--------------------------------------
Confidence 999999999998854 34678888887653210
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCcceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcE
Q psy14977 343 SVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQL 416 (469)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~ 416 (469)
.....|+|.. ...+|||++.++.+. ..|++|..|.++|+|+++| |++||+
T Consensus 153 -----------------------~~~~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~ 208 (721)
T 2xkx_A 153 -----------------------EKVMEIKLIK-GPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDK 208 (721)
T ss_pred -----------------------ccceeeeeee-ecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCE
Confidence 0012344432 234799999876532 3689999999999999999 999999
Q ss_pred EEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 417 TLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 417 IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
|++|||++|.+++ |.+++.+|+..++
T Consensus 209 Il~Vng~~v~~~~-~~~~~~~l~~~~~ 234 (721)
T 2xkx_A 209 ILAVNSVGLEDVM-HEDAVAALKNTYD 234 (721)
T ss_pred EEEECCeeCCCCC-HHHHHHHHHcCCC
Confidence 9999999999999 9999999987765
No 6
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.83 E-value=4.5e-19 Score=161.95 Aligned_cols=153 Identities=25% Similarity=0.348 Sum_probs=122.7
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+++|+|.|.. ..+|||.+.... .+++|..|.+++||+++||+.||+|++|||+++.+++++.+..+++
T Consensus 4 ~~r~v~l~k~~--~~~lG~~~~~~~----~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~----- 72 (166)
T 1w9e_A 4 DPREVILCKDQ--DGKIGLRLKSID----NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLK----- 72 (166)
T ss_dssp CCEEEEEECCT--TSCCSEEEEEET----TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred CCEEEEEEeCC--CCcEeEEEEeCC----CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-----
Confidence 46899999974 468899988743 4899999999999999999999999999999999998866666644
Q ss_pred cceEeecCcEEEEEEECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCccccC
Q psy14977 283 EGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSAR 362 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (469)
...+..+.|+|.+...
T Consensus 73 ----~~~~~~v~l~vr~~~~------------------------------------------------------------ 88 (166)
T 1w9e_A 73 ----QAFGEKITMTIRDRPF------------------------------------------------------------ 88 (166)
T ss_dssp ----HCCSSEEEEEEECCTT------------------------------------------------------------
T ss_pred ----cCCCCEEEEEEEcCCC------------------------------------------------------------
Confidence 2346688888843211
Q ss_pred CCCCcceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 363 SSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 363 ~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
.+.++|..+....|||.+. .+ +|..|.++++|+++||++||+|++|||+++.++. ++++...++..+
T Consensus 89 -----~~~v~l~~~~~~~lG~~~~------~g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~-~~~v~~~v~r~g 155 (166)
T 1w9e_A 89 -----ERTITMHKDSTGHVGFIFK------NG-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK-DSQIADILSTSG 155 (166)
T ss_dssp -----CEEEEEECCTTSCCSEEEE------TT-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCC-HHHHHHHHHHSC
T ss_pred -----cEEEEEecCCCCcEeEEEe------CC-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCC-hHHHHHHHhhCC
Confidence 1233343223357899887 24 8999999999999999999999999999999999 999888887766
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
+
T Consensus 156 ~ 156 (166)
T 1w9e_A 156 T 156 (166)
T ss_dssp S
T ss_pred C
Confidence 5
No 7
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.79 E-value=8.2e-18 Score=186.79 Aligned_cols=228 Identities=23% Similarity=0.342 Sum_probs=142.5
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC----CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN----PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~----~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
..+|+|.+.. .+|||++.++.+. ...|++|..|.++++|+++| |++||+|++|||++|.++++.+++.+++
T Consensus 155 ~~~v~l~k~~---~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~- 230 (721)
T 2xkx_A 155 VMEIKLIKGP---KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK- 230 (721)
T ss_pred ceeeeeeeec---CCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHH-
Confidence 3568888764 6799999886532 13589999999999999999 9999999999999999999999998854
Q ss_pred cCcccceEeecCcEEEEEEECCCCCCCCCCCCCCCCCCccccccccccccc-CCCCCCCCCCccCCCCCCCCCCCCCCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDR-QGRPCSPPLDYARSVIPMPPPPPPPPRW 357 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 357 (469)
..+..+.|+|.+......... .. .+... ..... ..+. ..........+.....+.. +....+..
T Consensus 231 ---------~~~~~v~l~V~R~g~~~~~~~-~~--~p~~~-~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~ 295 (721)
T 2xkx_A 231 ---------NTYDVVYLKVAKPSNAYLSDS-YA--PPDIT-TSYSQ-HLDNEISHSSYLGTDYPTAMTPTS-PRRYSPVA 295 (721)
T ss_pred ---------cCCCeEEEEEEeCCcccccCC-CC--CCCcc-cCCCC-CcccccCCcccccccccccCCCCC-CcccCCcc
Confidence 346678888877654211100 00 00000 00000 0000 0000000000000000000 00000000
Q ss_pred -cccc-CCCCCcceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHH
Q psy14977 358 -NYSA-RSSKDTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKD 434 (469)
Q Consensus 358 -~~~~-~~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~ea 434 (469)
.... .......+.|.|... ..+|||.+.++.+ ..|++|..|.++|+|+++| |++||+|++|||++|.+++ |+++
T Consensus 296 ~~~~~~~~~~~~~~~v~l~~~-~~~lG~~i~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~-~~e~ 372 (721)
T 2xkx_A 296 KDLLGEEDIPREPRRIVIHRG-STGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNAS-HEQA 372 (721)
T ss_pred cccccccccccceEEEEEEEC-CCCccEEEeccCC-CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCC-HHHH
Confidence 0000 000123456666543 3589999987653 4699999999999999999 9999999999999999999 9999
Q ss_pred HHHHHhCCC-----ccccccccCc
Q psy14977 435 FDTVISFSH-----EQTSPSMYGV 453 (469)
Q Consensus 435 v~~Lk~~g~-----~~~~p~~~~~ 453 (469)
+++|+..+. +++.|..|.+
T Consensus 373 ~~~l~~~~~~v~L~v~r~~~~~~~ 396 (721)
T 2xkx_A 373 AIALKNAGQTVTIIAQYKPEEYSR 396 (721)
T ss_pred HHHHHhcCCeEEEEEEeCchhhhh
Confidence 999998766 3455666643
No 8
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.79 E-value=2.6e-20 Score=192.80 Aligned_cols=158 Identities=19% Similarity=0.290 Sum_probs=71.1
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC-CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN-PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~-~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+.|+|.|.+ +.+|||.|.+.... ...+++|..|.+++||+++| |+.||+|++|||+++.++++.+++.+|+.
T Consensus 205 ~~~V~i~k~~--ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~--- 279 (388)
T 3suz_A 205 CKELQLEKHK--GEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKG--- 279 (388)
T ss_dssp CEEEEECCCS--SCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTT---
T ss_pred ceEEEEECCC--CCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh---
Confidence 4789999975 47899998874421 13468999999999999999 99999999999999999999999988652
Q ss_pred ccceEeecCcEEEEEEECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCcccc
Q psy14977 282 KEGQMLKSNRELSMTVRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSA 361 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (469)
.+.+..+.|+|.+.....
T Consensus 280 -----~~~~~~v~l~v~r~~~~~--------------------------------------------------------- 297 (388)
T 3suz_A 280 -----LKNQTQVKLNIVSCPPVT--------------------------------------------------------- 297 (388)
T ss_dssp -----CTTCSCEEEEEEECCSCC---------------------------------------------------------
T ss_pred -----ccCCCccccccccccccc---------------------------------------------------------
Confidence 234566888888753210
Q ss_pred CCCCCcceEEEEEe-cCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 362 RSSKDTVRKVELNI-EPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 362 ~~~~~~~~~V~L~~-~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.+.+.. .....|||.+.++ +|..|.++|+|+++||++||+|++|||++|.+++ |++++++|++
T Consensus 298 --------~v~l~~~~~~~~lG~~i~~g-------~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s-~~~~~~~l~~ 361 (388)
T 3suz_A 298 --------TVLIKRPDLKYQLGFSVQNG-------IICSLMRGGIAERGGVRVGHRIIEINGQSVVATA-HEKIVQALSN 361 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------eeeEeecCCCCccceEEecC-------EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHh
Confidence 011100 1123688887632 8999999999999999999999999999999999 9999999998
Q ss_pred CCCc
Q psy14977 441 FSHE 444 (469)
Q Consensus 441 ~g~~ 444 (469)
.+..
T Consensus 362 ~~~~ 365 (388)
T 3suz_A 362 SVGE 365 (388)
T ss_dssp ----
T ss_pred CCCe
Confidence 7763
No 9
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.64 E-value=2.6e-15 Score=142.40 Aligned_cols=145 Identities=22% Similarity=0.146 Sum_probs=96.5
Q ss_pred eEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCC-CEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEE
Q psy14977 218 GFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPG-DSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMT 296 (469)
Q Consensus 218 GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~G-D~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~ 296 (469)
|+|+....+... ..|++|..|.++|||+++||+.| |+|++|||+++.++.+... .+++ ...+..+.|+
T Consensus 3 g~~~~~~~~~~~-~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~-~~~~---------~~~g~~v~l~ 71 (209)
T 3rle_A 3 GSSQSVEIPGGG-TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLK-DLLK---------ANVEKPVKML 71 (209)
T ss_dssp -----CCCTTSS-SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHH-HHHH---------HTTTSCEEEE
T ss_pred chhhhhhccCCC-CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHH-HHHh---------cCCCCEEEEE
Confidence 344444433332 46899999999999999999999 9999999999998865332 2222 2346778888
Q ss_pred EECCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCccccCCCCCcceEEEEEe-
Q psy14977 297 VRSPSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNI- 375 (469)
Q Consensus 297 V~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~~- 375 (469)
|.|...... ..++|..
T Consensus 72 v~R~~~~~~---------------------------------------------------------------~~v~l~p~ 88 (209)
T 3rle_A 72 IYSSKTLEL---------------------------------------------------------------RETSVTPS 88 (209)
T ss_dssp EEETTTCCE---------------------------------------------------------------EEEEECCC
T ss_pred EEecCCceE---------------------------------------------------------------EEEEEccc
Confidence 876432100 0001100
Q ss_pred ---cCCCcccEEEecccc---cCCcEEEEEecCCCHHHHcCCCC-CcEEEEEecEEecCcchHHHHHHH
Q psy14977 376 ---EPGQSLGLMIRGGVE---YNLGIFITGVDKDSVAERAGLLV-SQLTLYQFIKEFLILSDHDKDFDT 437 (469)
Q Consensus 376 ---~~g~~LGfsi~Gg~e---~~~GI~V~~V~pgs~A~~aGLr~-GD~IL~VNG~sv~~~s~h~eav~~ 437 (469)
.....||+.+..... ...|++|..|.++|+|+++||++ ||+|++|||+ +.++.|+.++++.
T Consensus 89 ~~~~~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~ 156 (209)
T 3rle_A 89 NLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIET 156 (209)
T ss_dssp SSSSSSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHH
T ss_pred ccccccCccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHh
Confidence 012367777763211 12589999999999999999999 9999999998 8887744444443
No 10
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.57 E-value=4.7e-14 Score=147.97 Aligned_cols=143 Identities=20% Similarity=0.160 Sum_probs=91.8
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCCCCCCCCCCC
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHP 311 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~ 311 (469)
.|++|..|.+++||+++||+.||+|++|||+++.++. ++...+.. ...++.+.|+|.|........
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~--~l~~~l~~--------~~~g~~v~l~v~R~g~~~~~~---- 328 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFA--ELRSRIAT--------TEPGTKVKLGLLRNGKPLEVE---- 328 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHH--HHHHHHHh--------cCCCCEEEEEEEECCEEEEEE----
Confidence 5899999999999999999999999999999999774 44444331 233555666655543210000
Q ss_pred CCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCccccCCCCCcceEEEEEecCCCcccEEEeccc--
Q psy14977 312 LPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGV-- 389 (469)
Q Consensus 312 ~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~~~~g~~LGfsi~Gg~-- 389 (469)
..+.. + +... .. .....+|+......
T Consensus 329 ------v~l~~---~------~~~~-------------------------------~~------~~~~~~gl~~~~~~~~ 356 (436)
T 4a8c_A 329 ------VTLDT---S------TSSS-------------------------------AS------AEMITPALEGATLSDG 356 (436)
T ss_pred ------EEECC---C------Cccc-------------------------------cc------ccccccCceeeecccc
Confidence 00000 0 0000 00 00001222211111
Q ss_pred ---ccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 390 ---EYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 390 ---e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
....|++|..|.++++|+++||++||+|++|||+++.+ ++++.++|+....
T Consensus 357 ~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~---~~~~~~~l~~~~~ 410 (436)
T 4a8c_A 357 QLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNS---IAEMRKVLAAKPA 410 (436)
T ss_pred cccCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCC---HHHHHHHHHhCCC
Confidence 11258999999999999999999999999999999987 5588888887543
No 11
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.52 E-value=7e-14 Score=147.25 Aligned_cols=147 Identities=19% Similarity=0.159 Sum_probs=90.8
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCCCCCCCCCCC
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHP 311 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~ 311 (469)
.|++|..|.+++||+++||+.||+|++|||+++.++ .++...+.. .+.++.+.|+|.|........
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~--~~l~~~l~~--------~~~g~~v~l~V~R~g~~~~~~---- 347 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQA--TQVKTTISL--------LRVGSTVKIIVERDNKPLTLS---- 347 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHT--------SCTTCEEEEEEEETTEEEEEE----
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHh--------cCCCCEEEEEEEECCEEEEEE----
Confidence 589999999999999999999999999999999876 444444331 233455555555543210000
Q ss_pred CCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCccccCCCCCcceEEEEEecCCCcccEEEeccc--
Q psy14977 312 LPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGV-- 389 (469)
Q Consensus 312 ~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~~~~g~~LGfsi~Gg~-- 389 (469)
..+.....+... .. .+ ...-.+++|......
T Consensus 348 ------v~l~~~~~~~~~--------------------------------------~~--~~-~~~~~G~~l~~~~~~~~ 380 (451)
T 3pv2_A 348 ------AVVTDIKSHEQK--------------------------------------LQ--SN-NPFLYGLALRAFEQESP 380 (451)
T ss_dssp ------EECBCHHHHHHH--------------------------------------HH--HH-STTTTTEEEEEEEEECT
T ss_pred ------EEEccCCccccc--------------------------------------cc--cc-cccccccccccCChhHh
Confidence 000000000000 00 00 000011222211100
Q ss_pred --ccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 390 --EYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 390 --e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
....|++|..|.++|+|+++||++||+|++|||+++.+ .+++.++|+..+
T Consensus 381 ~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~---~~~~~~~l~~~~ 432 (451)
T 3pv2_A 381 PHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTD---VKSLQTIAQEKK 432 (451)
T ss_dssp TSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS---HHHHHHHTTSSC
T ss_pred cccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---HHHHHHHHhcCC
Confidence 01248999999999999999999999999999999987 458888887643
No 12
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.49 E-value=1.4e-13 Score=111.68 Aligned_cols=77 Identities=25% Similarity=0.383 Sum_probs=67.4
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+|+|+|.|++ .++|||+++++ +|..|.+++||+++||++||+|++|||+++.+++|++++++||
T Consensus 4 ~~r~v~l~k~~--~g~~Gf~i~~g--------~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr----- 68 (82)
T 1r6j_A 4 DPRTITMHKDS--TGHVGFIFKNG--------KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS----- 68 (82)
T ss_dssp CCEEEEEECCT--TSCCCEEEETT--------EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred ceEEEEEEECC--CCCeEEEEECC--------EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-----
Confidence 46899999985 46799999863 3789999999999999999999999999999999999999966
Q ss_pred cceEeecCcEEEEEEEC
Q psy14977 283 EGQMLKSNRELSMTVRS 299 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~ 299 (469)
..+..|+|+|..
T Consensus 69 -----~~g~~V~L~v~p 80 (82)
T 1r6j_A 69 -----TSGTVVTITIMP 80 (82)
T ss_dssp -----HSCSEEEEEEEE
T ss_pred -----cCCCEEEEEEEe
Confidence 457788888764
No 13
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=2e-13 Score=117.73 Aligned_cols=95 Identities=24% Similarity=0.505 Sum_probs=75.6
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCC----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCE
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGI 262 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~ 262 (469)
||++.|+.+.+ .++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+
T Consensus 14 dp~s~y~~~~~-----~~~v~l~k~~---~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~ 85 (117)
T 2byg_A 14 GTENLYFQSMT-----VVEIKLFKGP---KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNY 85 (117)
T ss_dssp ------CEEEE-----EEEEEEECBT---TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CCcccccCCCc-----eEEEEEEeCC---CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 89999988654 3788888874 79999999886531 3589999999999999999 9999999999999
Q ss_pred EcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECC
Q psy14977 263 PFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 263 ~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~ 300 (469)
++.++++.+++.+|+ ..+..+.|+|.|.
T Consensus 86 ~v~~~~~~~~~~~l~----------~~g~~v~l~v~R~ 113 (117)
T 2byg_A 86 SLEEVTHEEAVAILK----------NTSEVVYLKVGKP 113 (117)
T ss_dssp ECTTCCHHHHHHHHH----------TCCSEEEEEEEEE
T ss_pred ECCCCCHHHHHHHHH----------cCCCeEEEEEEeC
Confidence 999999999999965 3467888888764
No 14
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.46 E-value=7.9e-13 Score=108.08 Aligned_cols=85 Identities=31% Similarity=0.526 Sum_probs=74.4
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
..+++|+|.|.. .||||++.++.+ ..+++|..|.+++||+++||++||+|++|||+++.++++.++.++|+
T Consensus 3 ~~~r~v~l~k~~---~g~G~~~~~~~~--~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~---- 73 (90)
T 2he4_A 3 LRPRLCHLRKGP---QGYGFNLHSDKS--RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIK---- 73 (90)
T ss_dssp TCCEEEEEECBT---TBCCEEEEECSS--SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHT----
T ss_pred CCcEEEEEEECC---CCccEEEEccCC--CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 346899999986 799999998765 45899999999999999999999999999999999999999999965
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.+..
T Consensus 74 ------~~~~~v~l~v~r~~ 87 (90)
T 2he4_A 74 ------AREDEARLLVVGPS 87 (90)
T ss_dssp ------TSSSEEEEEEECCC
T ss_pred ------cCCCcEEEEEEccC
Confidence 33688899988754
No 15
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.45 E-value=4.4e-13 Score=114.56 Aligned_cols=94 Identities=27% Similarity=0.543 Sum_probs=73.0
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTG 266 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~ 266 (469)
||++.|+.+.+ .++|+|.|.. .||||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.+
T Consensus 14 d~~t~~~~~~~-----~~~v~l~~~~---~glG~~l~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~ 84 (112)
T 2r4h_A 14 GTENLYFQSMD-----FYTVELERGA---KGFGFSLRGGREY-NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKN 84 (112)
T ss_dssp ---------CC-----EEEEEEECBT---TBTSEEEEECGGG-TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTT
T ss_pred CCcccccCCCc-----eEEEEEEcCC---CccCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC
Confidence 78888777543 5889999875 6899999988654 5689999999999999999 99999999999999999
Q ss_pred CCHHHHHHHhhhcCcccceEeecCcEEEEEEECC
Q psy14977 267 ISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 267 ~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~ 300 (469)
+++.+++..++ ..+..+.|+|.|.
T Consensus 85 ~~~~~~~~~l~----------~~g~~v~l~v~R~ 108 (112)
T 2r4h_A 85 MKHSRAIELIK----------NGGRRVRLFLKRG 108 (112)
T ss_dssp CCHHHHHHHHH----------TTTTEEEEEEECC
T ss_pred CCHHHHHHHHH----------cCCCeEEEEEEeC
Confidence 99999998854 3467888888764
No 16
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.45 E-value=4.5e-13 Score=118.08 Aligned_cols=96 Identities=25% Similarity=0.443 Sum_probs=80.2
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCC-----------CCcEEEEEeCCCCHHHHcCCCCCCEE
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNP-----------GVGVYISRVEEGSIAERAGLRPGDSI 256 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~-----------~~gi~V~~V~pgspA~~aGL~~GD~I 256 (469)
+|++.|..+ .++|+|.|.. ..||||+|.++.+.. ..+++|..|.+++||+++||+.||+|
T Consensus 19 ~~~s~~~~~-------~r~v~l~r~~--~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~I 89 (132)
T 3l4f_D 19 GSGSDYIIK-------EKTVLLQKKD--SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFL 89 (132)
T ss_dssp CCSCCCCCC-------CCEEEEECCT--TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEE
T ss_pred CCCCCcCCC-------CEEEEEEECC--CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEE
Confidence 666666654 4789999964 479999999987631 12799999999999999999999999
Q ss_pred EEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 257 LQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 257 l~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++|||+++.++++.+++.+|+ ..+..+.|+|.+...
T Consensus 90 l~Vng~~v~~~~~~~~~~~l~----------~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 90 IEVNGQNVVKVGHRQVVNMIR----------QGGNTLMVKVVMVTR 125 (132)
T ss_dssp EEESSSBCTTSCHHHHHHHHH----------HTTTEEEEEEECCCC
T ss_pred EEECCEECCCCCHHHHHHHHH----------cCCCEEEEEEEECCC
Confidence 999999999999999999965 457889999887654
No 17
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.44 E-value=3.7e-13 Score=116.19 Aligned_cols=104 Identities=24% Similarity=0.296 Sum_probs=83.0
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTG 266 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~ 266 (469)
|||+.| ...+......+.+.+.+. .||||+|.++.+.....++|..|.+++||+++ ||++||+|++|||+++.+
T Consensus 4 dP~s~~-~~~~~~~~~~~~~~~~~~----~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~ 78 (118)
T 1v6b_A 4 GAATMF-SPEQIAGKDVRLLRIKKE----GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTD 78 (118)
T ss_dssp CCCSSS-CHHHHSSCCEEEEEEESC----SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTT
T ss_pred CCccee-cccccCCceEEEEEECCC----CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 899987 445555456677777775 58999999987753456999999999999999 799999999999999999
Q ss_pred CCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 267 ISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 267 ~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+++++++++|+... ...+..+.|+|.|...
T Consensus 79 ~~~~~~~~~l~~~~------~~~g~~v~l~v~r~~~ 108 (118)
T 1v6b_A 79 YTLAEAEAALQKAW------NQGGDWIDLVVAVCPP 108 (118)
T ss_dssp CBHHHHHHHHHHHH------HHTCSEEEEEEECCCS
T ss_pred CCHHHHHHHHHHhh------hcCCCeEEEEEEeCCc
Confidence 99999999876210 0127899999988543
No 18
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.44 E-value=3.3e-13 Score=109.56 Aligned_cols=69 Identities=22% Similarity=0.266 Sum_probs=61.7
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+....+|||++.++ +|..|.+++||+++||++||+|++|||+++.+++ |++++++||+.+.
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g-------~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~-~~evv~llr~~g~ 72 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG-------KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK-DSQIADILSTSGT 72 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT-------EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCC-HHHHHHHHHHSCS
T ss_pred ceEEEEEEECCCCCeEEEEECC-------EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCC-HHHHHHHHhcCCC
Confidence 3577888776667899999854 3899999999999999999999999999999999 9999999998776
No 19
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.43 E-value=9.9e-13 Score=110.70 Aligned_cols=88 Identities=35% Similarity=0.579 Sum_probs=76.1
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcC
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEG 280 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~ 280 (469)
...+++|+|.|.+ ..+|||+|.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.+++++|+
T Consensus 13 ~~~~~~v~l~k~~--~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~--- 86 (104)
T 1wi2_A 13 QFLPRIVTLKKPP--GAQLGFNIRGGKAS-QLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILK--- 86 (104)
T ss_dssp SSCCEEEEECCCT--TCCCSEEEECCSSS-CCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHH---
T ss_pred CCCCEEEEEEeCC--CCCccEEEEcccCC-CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh---
Confidence 3346899999985 47899999987764 56899999999999999999999999999999999999999999954
Q ss_pred cccceEeecCcEEEEEEECCCC
Q psy14977 281 YKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 281 ~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
.+..+.|+|.+...
T Consensus 87 --------~~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 87 --------TAREISMRVRFFSG 100 (104)
T ss_dssp --------HSSSEEEEEECCCC
T ss_pred --------CCCEEEEEEEECCC
Confidence 37788999988654
No 20
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.43 E-value=7.6e-13 Score=110.06 Aligned_cols=85 Identities=21% Similarity=0.379 Sum_probs=73.7
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.++|.|.|.. .+|||+|.++.. ..+||++|.++++|+++| |++||+|++|||+++.+++|.+++++||.
T Consensus 6 ~k~V~l~K~~---~~LG~tI~~~g~---g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~---- 75 (95)
T 3gge_A 6 EKEVNVYKSE---DSLGLTITDNGV---GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKE---- 75 (95)
T ss_dssp EEEEEEECCS---SCCCEEEECSSS---SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHH----
T ss_pred EEEEEEEECC---CCceEEEEcCCC---CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh----
Confidence 5789999975 899999986532 368999999999999999 99999999999999999999999999874
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+..+..++|.+.++..
T Consensus 76 ----~~~g~~~~L~lv~p~~ 91 (95)
T 3gge_A 76 ----LKKEELFTMKLIEPKK 91 (95)
T ss_dssp ----SCTTCEEEEEEEEECS
T ss_pred ----CCCCCEEEEEEECccc
Confidence 4567889998877543
No 21
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=111.34 Aligned_cols=87 Identities=21% Similarity=0.318 Sum_probs=74.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCC---CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANN---PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~---~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
.+++|+|.|.. .||||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++++++.+|+
T Consensus 15 ~~~~v~l~k~~---~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~- 90 (108)
T 2d92_A 15 EVKIVELVKDC---KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK- 90 (108)
T ss_dssp SCEEEEEEECS---SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHH-
T ss_pred ceEEEEEEECC---CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-
Confidence 46889999985 7999999987552 14689999999999999999 9999999999999999999999999966
Q ss_pred cCcccceEeecCcEEEEEEECCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
...+..+.|+|.|..
T Consensus 91 --------~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 91 --------AVPPGLVHLGICSGP 105 (108)
T ss_dssp --------HSCSEEEEEEEECCC
T ss_pred --------hCCCCeEEEEEEcCC
Confidence 223568899988864
No 22
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.42 E-value=2e-12 Score=106.31 Aligned_cols=86 Identities=28% Similarity=0.571 Sum_probs=73.1
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCC----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
+..++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..+
T Consensus 2 ~~~~~v~l~k~~---~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (94)
T 2fe5_A 2 MTIMEVNLLKGP---KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASL 78 (94)
T ss_dssp CCEEEEEEECCT---TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred cEEEEEEEEECC---CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 457889999985 78999999987531 3589999999999999999 999999999999999999999998885
Q ss_pred hhcCcccceEeecCcEEEEEEECC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~ 300 (469)
+ ..+..+.|+|.|.
T Consensus 79 ~----------~~~~~v~l~v~R~ 92 (94)
T 2fe5_A 79 K----------NTSDMVYLKVAKP 92 (94)
T ss_dssp H----------TCCSEEEEEEECC
T ss_pred H----------cCCCeEEEEEEcC
Confidence 4 3356888888764
No 23
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.41 E-value=1.8e-12 Score=106.11 Aligned_cols=70 Identities=31% Similarity=0.519 Sum_probs=63.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
.+++|+|.|.. .||||++.++.+ ..+++|..|.+++||+++||++||+|++|||+++.++++.+++.+++
T Consensus 3 ~~r~v~l~r~~---~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 72 (91)
T 1g9o_A 3 LPRLCCLEKGP---NGYGFHLHGEKG--KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIR 72 (91)
T ss_dssp CCEEEEEECBT---TBCCEEEEECTT--CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ccEEEEEEeCC---CcccEEEEecCC--CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 46899999986 689999998775 35899999999999999999999999999999999999999999965
No 24
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.41 E-value=2.5e-12 Score=109.96 Aligned_cols=97 Identities=23% Similarity=0.370 Sum_probs=78.7
Q ss_pred CCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCC-CCCCEEEEECCEEcCCCC
Q psy14977 190 RHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGL-RPGDSILQVNGIPFTGIS 268 (469)
Q Consensus 190 ~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL-~~GD~Il~VNG~~v~~~s 268 (469)
...+.....+....+++|+|.|.. ..||||.+.+.. .+++|..|.+++||+++|| +.||+|++|||+++.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~v~l~k~~--~~~lG~~i~~~~----~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~ 85 (113)
T 1va8_A 12 ERVYESIGHYGGETVKIVRIEKAR--DIPLGATVRNEM----DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKD 85 (113)
T ss_dssp CCCSSCCSEETTEECEEEEEEECT--TCCCCEEEEECS----SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCC
T ss_pred cccccccccCCCCceEEEEEEeCC--CCceeEEEEeCC----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC
Confidence 334455555566678899999985 358999998753 3899999999999999997 999999999999999999
Q ss_pred HHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 269 HEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 269 ~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+++++.+|+ ..+..+.|+|.+...
T Consensus 86 ~~~~~~~l~----------~~~~~v~l~v~r~~~ 109 (113)
T 1va8_A 86 VNEVFDLLS----------DMHGTLTFVLIPSSG 109 (113)
T ss_dssp HHHHHHHHH----------HCCEEEEEEEECCCC
T ss_pred HHHHHHHHH----------cCCCeEEEEEEECCc
Confidence 999999965 334678888887543
No 25
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.41 E-value=8.9e-13 Score=114.07 Aligned_cols=96 Identities=22% Similarity=0.468 Sum_probs=76.4
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCC--CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEc
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANN--PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPF 264 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~--~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v 264 (469)
+|++.|+.+. ..++|+|.|+. ..+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++
T Consensus 14 ~~~~~~~~~~-----~~~~v~l~k~~--~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v 86 (118)
T 3b76_A 14 GTENLYFQSM-----HEKVVNIQKDP--GESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVEL 86 (118)
T ss_dssp ----CCCEEE-----EEEEEEEECCT--TCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEG
T ss_pred CccccccCCC-----CcEEEEEEeCC--CCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC
Confidence 5566565533 34789998874 48999999998742 24689999999999999999 999999999999999
Q ss_pred CCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECC
Q psy14977 265 TGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 265 ~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~ 300 (469)
.++++.+++.+|+ ..+..+.|+|.|.
T Consensus 87 ~~~~~~~~~~~l~----------~~~~~v~L~v~R~ 112 (118)
T 3b76_A 87 TEVSRSEAVALLK----------RTSSSIVLKALEV 112 (118)
T ss_dssp GGSCHHHHHHHHH----------SCCSEEEEEEEEE
T ss_pred CCCCHHHHHHHHH----------cCCCeEEEEEEEC
Confidence 9999999999965 3467788888764
No 26
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=107.22 Aligned_cols=86 Identities=29% Similarity=0.521 Sum_probs=72.3
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
..++|+|.|.. .||||++.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+.
T Consensus 2 ~~~~v~l~~~~---~g~G~~~~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~--- 74 (90)
T 2q9v_A 2 MEQDIFLWRKE---TGFGFRILGGNEP-GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQ--- 74 (90)
T ss_dssp EEEEEEEECBT---TBCCEEEEECSST-TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHH---
T ss_pred CcEEEEEEECC---CccCEEEEccccC-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh---
Confidence 35789999986 7899999998765 4679999999999999999 99999999999999999999999988652
Q ss_pred ccceEeecCcEEEEEEECC
Q psy14977 282 KEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~ 300 (469)
...+..+.|+|.|.
T Consensus 75 -----~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 75 -----AAKQGHVNLTVRQT 88 (90)
T ss_dssp -----HHHHTEEEEEEEEC
T ss_pred -----CCCCCeEEEEEEec
Confidence 11134788888764
No 27
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.41 E-value=1.8e-12 Score=111.02 Aligned_cols=97 Identities=29% Similarity=0.495 Sum_probs=82.1
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTG 266 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~ 266 (469)
||++.|+.+.+. +.|+|.+.. .||||+|.++.+....+++|..|.+++||+++| |+.||+|++|||+++.+
T Consensus 7 Dp~s~~~~~~~~-----~~v~l~~~~---~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 78 (116)
T 2dm8_A 7 GPATCPIVPGQE-----MIIEISKGR---SGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRN 78 (116)
T ss_dssp CSSSCCCCTTSC-----EEEEEECCS---SCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSS
T ss_pred CcccCccCCCCE-----EEEEEEECC---CcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCC
Confidence 889988876543 778888864 899999998776423589999999999999999 99999999999999999
Q ss_pred CCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 267 ISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 267 ~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+++.+++.+|+ ..+..+.|+|.|...
T Consensus 79 ~~~~~~~~~l~----------~~~~~v~l~v~R~~~ 104 (116)
T 2dm8_A 79 SSHEEAITALR----------QTPQKVRLVVYRDEA 104 (116)
T ss_dssp SCHHHHHHHHH----------TCCSEEEEEEECCSS
T ss_pred CCHHHHHHHHH----------hCCCeEEEEEEeCCc
Confidence 99999998854 335788999988654
No 28
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.41 E-value=1.8e-12 Score=108.17 Aligned_cols=86 Identities=30% Similarity=0.568 Sum_probs=74.1
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCC----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
.++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |+.||+|++|||+++.++++.+++.+++
T Consensus 8 ~~~v~l~~~~---~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~- 83 (101)
T 2jik_A 8 EEEINLTRGP---SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR- 83 (101)
T ss_dssp EEEEEEECCT---TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH-
T ss_pred cEEEEEEeCC---CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-
Confidence 5889999975 89999999987642 3689999999999999999 9999999999999999999999988854
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 84 ---------~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 84 ---------NAGYAVSLRVQHRLE 98 (101)
T ss_dssp ---------TCCSEEEEEEEEESC
T ss_pred ---------hCCCeEEEEEEeCCC
Confidence 346788888877543
No 29
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=107.23 Aligned_cols=85 Identities=32% Similarity=0.628 Sum_probs=73.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+++|+|.|.. .||||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 5 ~~r~v~l~k~~---~glG~~l~~~~~~-~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~---- 76 (93)
T 2dkr_A 5 SSGVVELPKTD---EGLGFNIMGGKEQ-NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLK---- 76 (93)
T ss_dssp CSCEEEEECCT---TCCCEEEECSSSS-SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHH----
T ss_pred CCEEEEEEeCC---CCccEEEecccCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 35889999974 8999999987764 5689999999999999996 9999999999999999999999998854
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 77 ------~~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 77 ------AAQGSVKLVVRSGP 90 (93)
T ss_dssp ------HCCSEEEEEECCCC
T ss_pred ------hCCCcEEEEEEeCC
Confidence 34567888887754
No 30
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.40 E-value=2.3e-12 Score=107.79 Aligned_cols=88 Identities=25% Similarity=0.505 Sum_probs=75.8
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCC----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
+..++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..+
T Consensus 3 ~~~~~v~l~k~~---~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 79 (102)
T 2i1n_A 3 FKYEEIVLERGN---SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEAL 79 (102)
T ss_dssp EEEEEEEEECBT---TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred ceEEEEEEEECC---CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 456889999974 79999999987531 4699999999999999999 999999999999999999999999886
Q ss_pred hhcCcccceEeecCcEEEEEEECCCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+ ..+..+.|+|.|...
T Consensus 80 ~----------~~g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 80 K----------EAGPVVRLVVRRRQP 95 (102)
T ss_dssp H----------HSCSEEEEEEEEECC
T ss_pred H----------cCCCeEEEEEEeCCC
Confidence 5 457889999988654
No 31
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.40 E-value=1.8e-12 Score=105.35 Aligned_cols=85 Identities=26% Similarity=0.447 Sum_probs=71.3
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
+...+|+| +.. .+|||++.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.++..+++
T Consensus 2 ~~~~~v~l-~~~---~~~G~~l~~g~~~-~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~---- 72 (88)
T 2uzc_A 2 MSNYSVSL-VGP---APWGFRLQGGKDF-NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIK---- 72 (88)
T ss_dssp CCEEEEEE-ESS---SCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH----
T ss_pred CcEEEEEE-cCC---CcccEEEECcCCC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 34567787 332 7899999988765 56899999999999999999999999999999999999999888854
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 73 ------~~g~~v~l~v~R~g 86 (88)
T 2uzc_A 73 ------GCTGSLNMTLQRES 86 (88)
T ss_dssp ------TCCSEEEEEEECCC
T ss_pred ------hCCCeEEEEEEeCC
Confidence 33778888888753
No 32
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=2e-12 Score=109.32 Aligned_cols=89 Identities=20% Similarity=0.394 Sum_probs=75.0
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCC-------CCCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCCCCHHHH
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANN-------PGVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTGISHEEA 272 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~-------~~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~~s~~~a 272 (469)
+..+++|+|.|.. .+|||+|.++.+. ...+++|..|.+++||+++ ||++||+|++|||+++.++++.++
T Consensus 6 ~~~~~~v~l~k~~---~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~ 82 (107)
T 1uhp_A 6 SGKSLTLVLHRDS---GSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQA 82 (107)
T ss_dssp SSEEEEEEECCSS---SCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEEEeCC---CccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4557889999974 8999999987642 1468999999999999999 799999999999999999999999
Q ss_pred HHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 273 LKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 273 v~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+.+++ ..+..+.|+|.|...
T Consensus 83 ~~~~~----------~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 83 VEAFK----------TAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHHH----------HCCSSEEEEEEECCS
T ss_pred HHHHH----------cCCCcEEEEEEeCCC
Confidence 99865 346778888877644
No 33
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.40 E-value=1.4e-12 Score=106.55 Aligned_cols=85 Identities=31% Similarity=0.550 Sum_probs=72.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+++|+|.|.. ..+|||++.++.+. ..+++|..|.+++||+++ ||++||+|++|||+++.++++.+++..++
T Consensus 4 ~~~~v~l~k~~--~~~lG~~i~~~~~~-~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~---- 76 (90)
T 1qav_A 4 QRRRVTVRKAD--AGGLGISIKGGREN-KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALK---- 76 (90)
T ss_dssp SCEEEEEECCT--TTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHH----
T ss_pred ccEEEEEEeCC--CCCcCEEEEcccCC-CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 46899999974 47999999987654 468999999999999999 79999999999999999999999998855
Q ss_pred ccceEeecCcEEEEEEECC
Q psy14977 282 KEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.+.
T Consensus 77 ------~~~~~v~l~v~r~ 89 (90)
T 1qav_A 77 ------KTGKEVVLEVKYM 89 (90)
T ss_dssp ------TCCSEEEEEEEEC
T ss_pred ------hCCCeEEEEEEEe
Confidence 3467788888763
No 34
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.39 E-value=2.7e-12 Score=108.06 Aligned_cols=87 Identities=26% Similarity=0.558 Sum_probs=74.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
.+++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++
T Consensus 3 ~~~~v~l~k~~---~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (105)
T 2awx_A 3 KIMEIKLIKGP---KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALK 79 (105)
T ss_dssp CEEEEEEECBT---TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred eEEEEEEEECC---CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35789999986 79999999987631 2589999999999999999 9999999999999999999999998854
Q ss_pred hcCcccceEeecCcEEEEEEECCCC
Q psy14977 278 FEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 278 ~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 80 ----------~~~~~v~l~v~R~~~ 94 (105)
T 2awx_A 80 ----------NTSDFVYLKVAKPTS 94 (105)
T ss_dssp ----------SCCSEEEEEEECCCC
T ss_pred ----------cCCCeEEEEEEcCCC
Confidence 347889999988654
No 35
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.39 E-value=1.4e-12 Score=105.80 Aligned_cols=83 Identities=33% Similarity=0.623 Sum_probs=71.1
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHH-cCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~-aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
+++|+|.|.. ..+|||++.++.+. ..+++|..|.+++||++ +||++||+|++|||+++.++++.+++.+++
T Consensus 3 ~~~v~l~~~~--~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~----- 74 (87)
T 4e34_A 3 IRKVLLLKED--HEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILS----- 74 (87)
T ss_dssp CEEEEEECCT--TBCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred EEEEEEEECC--CCcccEEEEccCCC-CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 5789999975 47999999988765 56799999999999999 699999999999999999999999999965
Q ss_pred cceEeecCcEEEEEEEC
Q psy14977 283 EGQMLKSNRELSMTVRS 299 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~ 299 (469)
..+..+.|+|..
T Consensus 75 -----~~~~~v~l~v~~ 86 (87)
T 4e34_A 75 -----QQRGEIEFEVVY 86 (87)
T ss_dssp -----HCCSEEEEEEEE
T ss_pred -----cCCCeEEEEEEE
Confidence 345677777653
No 36
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.39 E-value=8.2e-13 Score=115.94 Aligned_cols=89 Identities=25% Similarity=0.498 Sum_probs=75.0
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCC--CCCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANN--PGVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~--~~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
...++|+|.|.. .||||+|.++.+. ...+++|..|.+++||+++ ||++||+|++|||+++.+++|++++++||
T Consensus 28 ~~~~~v~l~k~~---~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~- 103 (130)
T 1i16_A 28 ATVCTVTLEKMS---AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIK- 103 (130)
T ss_dssp EEEEEEEEETTS---SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHH-
T ss_pred CcEEEEEEEcCC---CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-
Confidence 446889999874 7999999998872 1458999999999999999 79999999999999999999999999976
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 104 --------~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 104 --------ALPDGPVTIVIRRKSL 119 (130)
T ss_dssp --------TSCSSEEEEEEEEESS
T ss_pred --------hCCCceEEEEEEeCCC
Confidence 2335678888887643
No 37
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.39 E-value=2.1e-12 Score=107.22 Aligned_cols=89 Identities=25% Similarity=0.395 Sum_probs=72.5
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGI 267 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~ 267 (469)
||++.+.. +.++|.+.. .||||++.++.+ ..+++|..|.+++||+++||++||+|++|||+++.++
T Consensus 3 Dp~~~~~~---------~~~~l~~~~---~g~G~~~~~~~~--~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 68 (98)
T 2jxo_A 3 DPFTMLRP---------RLCTMKKGP---SGYGFNLHSDKS--KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGK 68 (98)
T ss_dssp CSSCSSCC---------EEEEEECTT---TCCCEEEECCCS--SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTC
T ss_pred CCCccCCc---------EEEEEEeCC---CcccEEEEecCC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 66665544 889999875 789999998764 3589999999999999999999999999999999999
Q ss_pred CHHHHHHHhhhcCcccceEeecCcEEEEEEEC
Q psy14977 268 SHEEALKMCFFEGYKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 268 s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~ 299 (469)
++.++.++|+. ..+..+.|+|.|
T Consensus 69 ~~~~~~~~l~~---------~~~~~~~l~v~R 91 (98)
T 2jxo_A 69 QHGDVVSAIRA---------GGDETKLLVVDR 91 (98)
T ss_dssp CHHHHHHHHHT---------TTTEEEEEECCH
T ss_pred CHHHHHHHHHh---------CCCcEEEEEEEC
Confidence 99999998662 234455566654
No 38
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.39 E-value=2.4e-12 Score=106.23 Aligned_cols=87 Identities=22% Similarity=0.388 Sum_probs=74.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
...+|+|.|.. .+.+|||++.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++
T Consensus 3 ~~~~v~l~k~~-~~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~---- 75 (95)
T 2vwr_A 3 EILQVALHKRD-SGEQLGIKLVRRTD--EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQ---- 75 (95)
T ss_dssp EEEEEEEECSS-TTCCCCEEEEECSS--SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH----
T ss_pred EEEEEEEEECC-CCCcccEEEEeccC--CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 45789999863 34789999988765 4589999999999999999 9999999999999999999998888854
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 76 ------~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 76 ------ASGERVNLTIARPGK 90 (95)
T ss_dssp ------HCCSEEEEEEEEESC
T ss_pred ------cCCCEEEEEEEcCCc
Confidence 457889999887543
No 39
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.38 E-value=1.4e-12 Score=105.82 Aligned_cols=75 Identities=27% Similarity=0.299 Sum_probs=67.3
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHH-cCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAER-AGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~-aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+....+|||.+.++.+...+++|..|.++|+|++ +||++||+|++|||+++.+++ +++++.+++..++
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 78 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTK-HKEAVTILSQQRG 78 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCC-HHHHHHHHHHCCS
T ss_pred EEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 46788877667799999998877677899999999999999 589999999999999999999 9999999998755
No 40
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.38 E-value=1.6e-12 Score=109.32 Aligned_cols=87 Identities=32% Similarity=0.632 Sum_probs=74.4
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+++|+|.|.. ..+|||+|.++.+. ..+++|..|.+++||+++ ||++||+|++|||+++.++++.+++.+|+
T Consensus 9 ~~~~v~l~~~~--~~~lG~~l~~g~~~-~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~---- 81 (103)
T 2dc2_A 9 PIRKVLLLKED--HEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILS---- 81 (103)
T ss_dssp CEEEEEEECCS--SSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHH----
T ss_pred CcEEEEEEeCC--CCccCEEEEeccCC-CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 45889999874 47999999998765 458999999999999996 89999999999999999999999999965
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.+...
T Consensus 82 ------~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 82 ------QQRGEIEFEVVYVAL 96 (103)
T ss_dssp ------HCCSEEEEEEEECC-
T ss_pred ------hCCCcEEEEEEecCC
Confidence 445688998887654
No 41
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=1.7e-12 Score=109.50 Aligned_cols=91 Identities=26% Similarity=0.374 Sum_probs=74.4
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.++|+|.|.. .||||+|.++.+.....++|..|.+++||+++| |++||+|++|||+++.+++|++++++|+.+...
T Consensus 7 ~~~v~l~k~~---~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 83 (103)
T 1ufx_A 7 GTLVRVKKSA---ATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKT 83 (103)
T ss_dssp SEEEEEECCS---SSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHC
T ss_pred eEEEEEEcCC---CcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhccc
Confidence 4788887764 899999999987633445999999999999999 999999999999999999999999998732110
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..++.+.++|.|...
T Consensus 84 -----~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 84 -----KDRDYIDFLVTEFNS 98 (103)
T ss_dssp -----SSCSEEEEEECCCCC
T ss_pred -----CCCCeEEEEEEEccc
Confidence 146778888877644
No 42
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.38 E-value=4.5e-12 Score=104.80 Aligned_cols=87 Identities=25% Similarity=0.475 Sum_probs=74.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCC-CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANN-PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~-~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+++|+|.|.. .||||++.+.... ...+++|..|.+++||+++||++||+|++|||+++.++++.++..+|+
T Consensus 3 ~~r~v~l~k~~---~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~---- 75 (96)
T 2v90_A 3 KPRCLHLEKGP---QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQ---- 75 (96)
T ss_dssp CCEEEEEECBT---TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHH----
T ss_pred CCEEEEEEeCC---CcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 46899999986 6999999874321 145899999999999999999999999999999999999999999865
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 76 ------~~g~~v~l~v~r~~~ 90 (96)
T 2v90_A 76 ------GQGSCVSLTVVDPEA 90 (96)
T ss_dssp ------TTTTEEEEEEECCCT
T ss_pred ------cCCCEEEEEEECCCC
Confidence 337899999988754
No 43
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.37 E-value=3.8e-12 Score=105.41 Aligned_cols=84 Identities=29% Similarity=0.490 Sum_probs=70.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEc-------CCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHH
Q psy14977 203 PVRTINMNRSQDANHGFGICVKG-------GANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKM 275 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~g-------g~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ 275 (469)
.+++|+|.|.. ..+|||+|.+ +.+. ..+++|..|.+++||+++||++||+|++|||+++.+++++++.++
T Consensus 4 ~~r~v~l~k~~--~~~~Gf~l~~~g~~~~~~~~~-~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~ 80 (96)
T 2ego_A 4 QRKVLTLEKGD--NQTFGFEIQTYGLHHREEQRV-EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDI 80 (96)
T ss_dssp CEEEEEEECCT--TCCCSEEEEEEEC-------C-CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ccEEEEEEeCC--CCCccEEEEeccccccCCCCC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 46889999985 4699999997 3332 458999999999999999999999999999999999999999999
Q ss_pred hhhcCcccceEeecCcEEEEEEEC
Q psy14977 276 CFFEGYKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 276 ir~~~~~~~~Ilr~g~~v~l~V~~ 299 (469)
|+ ..+..+.|+|.+
T Consensus 81 l~----------~~~~~v~l~v~~ 94 (96)
T 2ego_A 81 IK----------ASGNVLRLETLY 94 (96)
T ss_dssp HH----------HTTTEEEEEEEC
T ss_pred HH----------hCCCeEEEEEEE
Confidence 66 335688888765
No 44
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.37 E-value=3.8e-12 Score=102.80 Aligned_cols=83 Identities=22% Similarity=0.330 Sum_probs=69.4
Q ss_pred EEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 205 ~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.+|+|.|.. .||||++.++.+. ..+++|..|.+++||+++| |+.||+|++|||+++.++++.++.++|+.
T Consensus 2 ~~v~l~k~~---~g~G~~i~~~~~~-~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~----- 72 (85)
T 2i04_A 2 IHTKLRKSS---RGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQS----- 72 (85)
T ss_dssp EEEEEECBT---TBSSEEEEECCST-TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-----
T ss_pred EEEEEEECC---CCCCEEEEcccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-----
Confidence 357888875 7899999987653 5689999999999999999 99999999999999999999999988652
Q ss_pred ceEeecCcEEEEEEEC
Q psy14977 284 GQMLKSNRELSMTVRS 299 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~ 299 (469)
...+..+.|+|.|
T Consensus 73 ---~~~g~~v~l~v~R 85 (85)
T 2i04_A 73 ---IPIGASVDLELCR 85 (85)
T ss_dssp ---SCTTCEEEEEEEC
T ss_pred ---CCCCCeEEEEEEC
Confidence 1226778887754
No 45
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.37 E-value=4.4e-12 Score=103.72 Aligned_cols=85 Identities=20% Similarity=0.382 Sum_probs=71.4
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..++|+|.|.. ...+|||.|.++.+ ..+++|..|.+++||+++||+.||+|++|||+++.++++.+++..++
T Consensus 6 ~~~~v~l~k~~-~~~~~G~~~~~~~~--~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~----- 77 (91)
T 1m5z_A 6 ELHKVTLYKDS-GMEDFGFSVADGLL--EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIA----- 77 (91)
T ss_dssp EEEEEEEECCT-TCSSSSEEEEECTT--SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred ceEEEEEEECC-CCCCccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 35789999875 34689999998765 35899999999999999999999999999999999999988887754
Q ss_pred cceEeecCcEEEEEEECC
Q psy14977 283 EGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.|.
T Consensus 78 -----~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 78 -----ESGNKLDLVISRN 90 (91)
T ss_dssp -----TSTTEEEEEEEEC
T ss_pred -----cCCCEEEEEEEeC
Confidence 3477888888764
No 46
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.37 E-value=2.5e-12 Score=109.16 Aligned_cols=92 Identities=25% Similarity=0.462 Sum_probs=75.1
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCC-CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANN-PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~-~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
+.+++|+|.|.. ..+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++++++.+|+.+
T Consensus 4 ~~~~~v~l~k~~--~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 4 MNIITVTLNMEK--YNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp CCEEEEEECHHH--HCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHH
T ss_pred ceEEEEEEEeCC--CCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 457889999863 47899999987542 14689999999999999999 999999999999999999999999997621
Q ss_pred CcccceEeecCcEEEEEEECCCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
......+.|+|.|...
T Consensus 82 -------~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 82 -------VHKPGPIVLTVAKSGG 97 (108)
T ss_dssp -------HTSSSCEEEEEECCCC
T ss_pred -------ccCCCeEEEEEEeCCC
Confidence 0023468999988654
No 47
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=1.2e-11 Score=107.38 Aligned_cols=88 Identities=18% Similarity=0.325 Sum_probs=75.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
...+|+|.|.. .||||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++++|+.
T Consensus 19 ~~~~v~l~~~~---~glG~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--- 91 (123)
T 1ueq_A 19 TFLSTTLKKSN---MGFGFTIIGGDEP-DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQS--- 91 (123)
T ss_dssp EEEEEEEECCT---TSCSEEEECCSSS-SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHT---
T ss_pred cEEEEEEEeCC---CceeEEEecccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh---
Confidence 45678888874 7999999987764 5689999999999999999 99999999999999999999999999662
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 92 -----~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 92 -----VPIGQSVNLVLCRGYP 107 (123)
T ss_dssp -----SCTTCEEEEEEEESCC
T ss_pred -----CCCCCeEEEEEEeCCC
Confidence 1237889999988654
No 48
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=2.6e-12 Score=105.03 Aligned_cols=83 Identities=20% Similarity=0.355 Sum_probs=70.1
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHH-cCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~-aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
+|.|+|.|.+ +.+|||+|.+..+ .+++|..|.+++||++ +||++||+|++|||+++.++++++++++|+
T Consensus 2 ~r~V~l~K~~--~~~lG~~i~~~~~---~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~----- 71 (88)
T 1kwa_A 2 SRLVQFQKNT--DEPMGITLKMNEL---NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLR----- 71 (88)
T ss_dssp CEEEEEEECS--SSCCCEEEECSCG---GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHH-----
T ss_pred eEEEEEEeCC--CCceeEEEEeCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh-----
Confidence 5889999985 4789999997543 3799999999999999 679999999999999999999999999976
Q ss_pred cceEeecCcEEEEEEECCC
Q psy14977 283 EGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~ 301 (469)
.....+.|+|.+..
T Consensus 72 -----~~~~~v~l~v~r~~ 85 (88)
T 1kwa_A 72 -----EMRGSITFKIVPSY 85 (88)
T ss_dssp -----HCCEEEEEEEECCC
T ss_pred -----cCCCcEEEEEECCc
Confidence 22237888887754
No 49
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.37 E-value=1.6e-12 Score=112.68 Aligned_cols=88 Identities=25% Similarity=0.517 Sum_probs=72.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP--GVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
.+++|+|.|.+ ..+|||+|.++.+.. ..+++|..|.+++||+++ ||++||+|++|||+++.++++.+++.+|+
T Consensus 24 ~~~~v~l~k~~--~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~-- 99 (120)
T 2iwo_A 24 GLRTVEMKKGP--TDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLK-- 99 (120)
T ss_dssp -CEEEEEEC------CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHH--
T ss_pred CcEEEEEEcCC--CCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH--
Confidence 46889999985 369999999976521 348999999999999999 79999999999999999999999999965
Q ss_pred CcccceEeecCcEEEEEEECCCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 100 --------~~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 100 --------NASGSIEMQVVAGGD 114 (120)
T ss_dssp --------HCCSEEEEEEECCTT
T ss_pred --------cCCCeEEEEEEECCc
Confidence 446679999988654
No 50
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.37 E-value=5.7e-12 Score=106.29 Aligned_cols=87 Identities=32% Similarity=0.529 Sum_probs=73.6
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC-----------CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHH
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP-----------GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEE 271 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~-----------~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~ 271 (469)
.+++|+|.|.. .||||+|.++.+.. ...++|..|.+++||+++||+.||+|++|||+++.++++++
T Consensus 6 ~~r~v~l~k~~---~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 6 SPRVVRIVKSE---SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp CCEEEEEECBT---TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred CcEEEEEEECC---CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 46899999986 58999999985432 12457999999999999999999999999999999999999
Q ss_pred HHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 272 ALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 272 av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++.+|+ ..+..+.|+|.+...
T Consensus 83 ~~~~l~----------~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 83 VVDLIR----------AGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHH----------HCSSEEEEEEECSSC
T ss_pred HHHHHH----------cCCCEEEEEEEcCCC
Confidence 999965 447889999988654
No 51
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.37 E-value=8.5e-12 Score=103.03 Aligned_cols=87 Identities=24% Similarity=0.510 Sum_probs=74.5
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
.+++|.|.|.. .+|||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 5 ~~~~v~l~k~~---~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-- 79 (96)
T 1d5g_A 5 DIFEVELAKND---NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLR-- 79 (96)
T ss_dssp CEEEEEEECSS---SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHH--
T ss_pred CEEEEEEEeCC---CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--
Confidence 46789999875 89999999876531 3589999999999999999 9999999999999999999999998855
Q ss_pred CcccceEeecCcEEEEEEECCCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 80 --------~~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 80 --------NTGQVVHLLLEKGQS 94 (96)
T ss_dssp --------SCCSEEEEEEECCSC
T ss_pred --------cCCCeEEEEEEcCCC
Confidence 357888999887543
No 52
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=3.3e-12 Score=104.77 Aligned_cols=83 Identities=28% Similarity=0.350 Sum_probs=70.5
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
+.+++|+|.|.. .||||.+.+. .+++|..|.+++||+++||+.||+|++|||+++.++++.++..+++
T Consensus 2 ~~~r~v~l~~~~---~g~G~~l~~~-----~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~---- 69 (91)
T 2f5y_A 2 MRYRQITIPRGK---DGFGFTICCD-----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIR---- 69 (91)
T ss_dssp CEEEEEEEECBT---TBTSEEEECS-----SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH----
T ss_pred CceEEEEEEeCC---CCccEEEecC-----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 457899999986 7899999763 2699999999999999999999999999999999999999998854
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 70 ------~~~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 70 ------SCPSEIILLVWRMVP 84 (91)
T ss_dssp ------TCSSEEEEEEEECC-
T ss_pred ------cCCCeEEEEEEeCCC
Confidence 335678888887643
No 53
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.37 E-value=5.7e-12 Score=103.25 Aligned_cols=85 Identities=29% Similarity=0.472 Sum_probs=73.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
...+|+|.|.+ ..+|||++.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++
T Consensus 4 ~~~~v~l~k~~--~~~lG~~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~---- 75 (92)
T 2qg1_A 4 DTLTIGLQKKP--GKGLGLSIVGKRN--DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLK---- 75 (92)
T ss_dssp CEEEEEEECCT--TSCCSEEEECCSS--SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH----
T ss_pred eEEEEEEEeCC--CCcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 35789999874 4799999998765 4589999999999999999 9999999999999999999999888854
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 76 ------~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 76 ------CSLGTVTLEVGRIS 89 (92)
T ss_dssp ------HCCSEEEEEEECCC
T ss_pred ------cCCCeEEEEEEccc
Confidence 35678899988764
No 54
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.36 E-value=1.9e-12 Score=105.59 Aligned_cols=83 Identities=24% Similarity=0.361 Sum_probs=69.0
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
..+|++.+. .+|||+|.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.+++..++
T Consensus 4 ~~~v~~~~~----~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~------ 72 (89)
T 2q3g_A 4 SFKVVLEGP----APWGFRLQGGKDF-NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIR------ 72 (89)
T ss_dssp EEEEEEESS----SCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH------
T ss_pred EEEEEEcCC----CcccEEEECcCCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH------
Confidence 345666542 7899999987764 56899999999999999999999999999999999999999988854
Q ss_pred ceEeecCcEEEEEEECCC
Q psy14977 284 GQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 73 ----~~g~~v~l~v~R~~ 86 (89)
T 2q3g_A 73 ----ACGERLSLGLSRAI 86 (89)
T ss_dssp ----TCTTEEEEEEEEEC
T ss_pred ----hCCCEEEEEEEeCC
Confidence 34677888887653
No 55
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.36 E-value=4.6e-12 Score=107.84 Aligned_cols=89 Identities=29% Similarity=0.483 Sum_probs=74.6
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCC-CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNP-GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~-~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.++|+|.|. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.+++|++++++||.+.
T Consensus 16 ~~~v~l~k~----~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~- 90 (109)
T 1wi4_A 16 FRVITVTKE----TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK- 90 (109)
T ss_dssp EEEEEECCS----SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC-
T ss_pred EEEEEEeCC----CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc-
Confidence 578888885 68999999987642 3479999999999999999 9999999999999999999999999987432
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
.+.+..+.|.+.|...
T Consensus 91 -----~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 91 -----LRSESPWEIAFIRSGP 106 (109)
T ss_dssp -----CSSSSCEEEEEECCCC
T ss_pred -----cCCCceEEEEEEeCCC
Confidence 2236778888887643
No 56
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.36 E-value=2.3e-12 Score=107.12 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=63.5
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+++.|+|.+. ..+|||+|.++. ...+||+.|.++++|+++| |++||+|++|||+++.+++ |.|++++||+...
T Consensus 5 ~~k~V~l~K~-~~~LG~tI~~~g--~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~-h~evv~lLk~~~~ 78 (95)
T 3gge_A 5 IEKEVNVYKS-EDSLGLTITDNG--VGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWR-HYDVAKKLKELKK 78 (95)
T ss_dssp EEEEEEEECC-SSCCCEEEECSS--SSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCC-HHHHHHHHHHSCT
T ss_pred eEEEEEEEEC-CCCceEEEEcCC--CCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCC-HHHHHHHHHhCCC
Confidence 4677888653 479999999642 2468999999999999999 9999999999999999999 9999999999644
No 57
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.36 E-value=5.6e-12 Score=104.53 Aligned_cols=86 Identities=28% Similarity=0.486 Sum_probs=73.4
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.++|+|.|.. .||||++.++.+....+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++
T Consensus 5 ~~~v~l~~~~---~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~----- 76 (98)
T 2opg_A 5 ETTIEISKGR---TGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLR----- 76 (98)
T ss_dssp EEEEEEECBT---TBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred EEEEEEEECC---CcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 4778999875 789999999876533589999999999999999 9999999999999999999999988854
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 77 -----~~~~~v~l~v~R~~~ 91 (98)
T 2opg_A 77 -----QTPQRVRLTLYRDEA 91 (98)
T ss_dssp -----TCCSEEEEEEEECSS
T ss_pred -----hCCCeEEEEEEcCCC
Confidence 335788888887654
No 58
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.36 E-value=9.7e-12 Score=103.07 Aligned_cols=86 Identities=23% Similarity=0.415 Sum_probs=73.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
..++|+|.|.. .+|||+|.++.+. ..+++|..|.+++||+++| |+.||+|++|||+++.++++.+++.+|+
T Consensus 5 ~~~~v~l~~~~---~~lG~~i~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~---- 76 (97)
T 1n7e_A 5 IIYTVELKRYG---GPLGITISGTEEP-FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ---- 76 (97)
T ss_dssp CEEEEEEECTT---SCCCEEEECCSST-TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH----
T ss_pred eEEEEEEEeCC---CCcCEEEEcccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 45778887763 6799999987653 4689999999999999999 9999999999999999999999998854
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 77 ------~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 77 ------MAGETVTLKIKKQTD 91 (97)
T ss_dssp ------TCCSEEEEEEECCCC
T ss_pred ------cCCCeEEEEEEeCCC
Confidence 357789999988654
No 59
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.36 E-value=2.4e-12 Score=103.87 Aligned_cols=82 Identities=23% Similarity=0.420 Sum_probs=68.5
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
..+|+|.+. .+|||.+.++.+. ..+++|..|.+++||+++||+.||+|++|||+++.++++.+++..++
T Consensus 2 ~~~v~l~~~----~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~------ 70 (85)
T 1rgw_A 2 AYSVTLTGP----GPWGFRLQGGKDF-NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIK------ 70 (85)
T ss_dssp EEEEEECCS----SCCCEEECCCGGG-TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHT------
T ss_pred cEEEEEeCC----CccCEEEEeccCC-CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHH------
Confidence 356777433 7899999988765 56899999999999999999999999999999999999999988854
Q ss_pred ceEeecCcEEEEEEECC
Q psy14977 284 GQMLKSNRELSMTVRSP 300 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.|.
T Consensus 71 ----~~~~~v~l~v~R~ 83 (85)
T 1rgw_A 71 ----SASYNLSLTLQKS 83 (85)
T ss_dssp ----TCSSCEEEEEESC
T ss_pred ----cCCCeEEEEEEeC
Confidence 3355688888764
No 60
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.36 E-value=1.5e-12 Score=113.79 Aligned_cols=109 Identities=24% Similarity=0.336 Sum_probs=80.1
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCC---CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEE
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNP---GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIP 263 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~---~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~ 263 (469)
+|++.|+.+.+... ...+|.|.|. ...||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||++
T Consensus 11 ~~~~~~~~~~~~~~-~~~~v~l~k~--~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~ 87 (127)
T 1wg6_A 11 EPDCYALSLESSEQ-LTLEIPLNDS--GSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGET 87 (127)
T ss_dssp CSSSCCSSCCCCEE-EEEEEECSSS--TTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEE
T ss_pred CCcccccCCCCCCc-eEEEEEEeeC--CCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEE
Confidence 77887877655432 2333444433 3589999999876421 2489999999999999999 99999999999999
Q ss_pred cCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 264 FTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 264 v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+.+++|.+++.+|+.++.. .-..+..|.|+|.|...
T Consensus 88 v~~~~~~~~~~~l~~~~~~---~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 88 LLGKSNHEAMETLRRSMSM---EGNIRGMIQLVILRRSG 123 (127)
T ss_dssp STTSCHHHHHHHHHHHHHH---HHHHTCEEEEEEEECSC
T ss_pred CCCCCHHHHHHHHHHhhcc---ccCCCCEEEEEEEeCCC
Confidence 9999999999996621000 00126789999988654
No 61
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=8.7e-13 Score=110.84 Aligned_cols=90 Identities=29% Similarity=0.547 Sum_probs=75.4
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
++..++|+|.|.. .||||+|.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++++|+.
T Consensus 7 ~~~~~~v~l~~~~---~g~G~~i~~g~~~-~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~- 81 (103)
T 1uep_A 7 GYKELDVHLRRME---SGFGFRILGGDEP-GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHH- 81 (103)
T ss_dssp SEEEECCEEESSS---SSCCEEECCCCST-TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHH-
T ss_pred CceEEEEEEEeCC---CccCEEEeeecCC-CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-
Confidence 3456778999864 7899999987764 5689999999999999999 99999999999999999999999999651
Q ss_pred CcccceEeecCcEEEEEEECCCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 82 -------~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 82 -------AARNGQVNLTVRRKVL 97 (103)
T ss_dssp -------HHHHTEEEEEEEEECC
T ss_pred -------CCCCCcEEEEEEeCCC
Confidence 1116789999988654
No 62
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.36 E-value=2.1e-12 Score=108.64 Aligned_cols=76 Identities=26% Similarity=0.296 Sum_probs=68.6
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+..+.+|||.+.++.+...+++|..|.++|+|+++ ||++||+|++|||+++.+++ +++++++|+..++
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~-~~~~~~~l~~~~~ 85 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTK-HKEAVTILSQQRG 85 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSC-HHHHHHHHHHCCS
T ss_pred CcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 4577888777677999999998876679999999999999996 79999999999999999999 9999999998876
No 63
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.36 E-value=2.8e-12 Score=104.79 Aligned_cols=76 Identities=22% Similarity=0.335 Sum_probs=68.0
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+....+|||.+.++.+...+++|..|.++|+|+++ ||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~-~~~~~~~~~~~~~ 80 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSAT-HDEAVQALKKTGK 80 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCC-HHHHHHHHHTCCS
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 3577888776677999999988776779999999999999999 79999999999999999999 9999999998654
No 64
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.35 E-value=3.8e-12 Score=105.38 Aligned_cols=87 Identities=28% Similarity=0.567 Sum_probs=73.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC---CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP---GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~---~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
...+|+|.|.. .+|||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.++..+|+
T Consensus 3 ~~~~v~l~k~~---~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~- 78 (97)
T 2jil_A 3 RTVEVTLHKEG---NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILK- 78 (97)
T ss_dssp EEEEEEEECBT---TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH-
T ss_pred eEEEEEEEeCC---CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-
Confidence 35678888864 79999999886531 4589999999999999999 9999999999999999999999999965
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 79 ---------~~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 79 ---------QCGQEAALLIEYDVS 93 (97)
T ss_dssp ---------HSCSEEEEEEEEECC
T ss_pred ---------cCCCeEEEEEEeCCC
Confidence 357888898887654
No 65
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.35 E-value=4.2e-12 Score=105.28 Aligned_cols=86 Identities=20% Similarity=0.471 Sum_probs=73.2
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC-----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP-----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~-----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
.+++|+|.|.. ..||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.++..++
T Consensus 5 ~~~~v~l~k~~--~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (98)
T 1ihj_A 5 LIHMVTLDKTG--KKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 82 (98)
T ss_dssp EEEEEEEECTT--SSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEEeCC--CCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 36789999953 479999999876541 2389999999999999999 999999999999999999999999886
Q ss_pred hhcCcccceEeecCcEEEEEEECC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~ 300 (469)
+ ..+..+.|+|.|.
T Consensus 83 ~----------~~g~~v~l~v~R~ 96 (98)
T 1ihj_A 83 K----------EADFKIELEIQTF 96 (98)
T ss_dssp H----------HSCSEEEEEEEEC
T ss_pred h----------cCCCeEEEEEEeC
Confidence 5 3577888888775
No 66
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.35 E-value=5.9e-12 Score=105.42 Aligned_cols=83 Identities=33% Similarity=0.562 Sum_probs=72.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+++|+|.|.. .||||.+.++.+ ..+++|..|.+++||+++| |+.||+|++|||+++.++++.+++..++
T Consensus 11 ~~~~v~l~k~~---~glG~~~~~~~~--~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~---- 81 (104)
T 3i4w_A 11 EPRRIVIHRGS---TGLGFNIVGGEX--GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK---- 81 (104)
T ss_dssp SCEEEEEECBT---TBTSEEEEECC---CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHH----
T ss_pred ccEEEEEEeCC---CccCEEEECCCC--CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 46889999985 789999998765 4589999999999999999 9999999999999999999999888854
Q ss_pred ccceEeecCcEEEEEEECC
Q psy14977 282 KEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.+.
T Consensus 82 ------~~~~~v~l~v~r~ 94 (104)
T 3i4w_A 82 ------NAGQTVTIIAQYK 94 (104)
T ss_dssp ------TSCSEEEEEEEEC
T ss_pred ------cCCCeEEEEEEEC
Confidence 4567888888775
No 67
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.35 E-value=3.7e-12 Score=104.95 Aligned_cols=84 Identities=26% Similarity=0.493 Sum_probs=70.4
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+++|+|.|.. .||||.+.++.+ ..+++|..|.+++||+++||++||+|++|||+++.++++++++.+|+
T Consensus 5 ~~r~v~l~~~~---~~~G~~l~~~~~--~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~----- 74 (95)
T 3r68_A 5 QPRVVVIKKGS---NGYGFYLRAGPE--QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIR----- 74 (95)
T ss_dssp CCEEEEEECBT---TBCSCEEEEC----CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred CcEEEEEecCC---CcccEEEEecCC--CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 45889999975 799999998665 25899999999999999999999999999999999999999999965
Q ss_pred cceEeecCcEEEEEEECCC
Q psy14977 283 EGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.+++.+..
T Consensus 75 -----~~~~~~~~~~~r~~ 88 (95)
T 3r68_A 75 -----KGGDQTTLLVLDKE 88 (95)
T ss_dssp -----TTTTEEEEEEEECC
T ss_pred -----hCCCeEEEEEECCc
Confidence 34667777766544
No 68
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=3.2e-12 Score=110.04 Aligned_cols=91 Identities=27% Similarity=0.418 Sum_probs=75.1
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHc--CCCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA--GLRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~a--GL~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
.-..++|+|.|.. ..+|||+|.++.+. ..+++|..|.+++||+++ ||++||+|++|||+++.++++.+++.+++.
T Consensus 13 ~~~~~~v~l~k~~--~~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~ 89 (119)
T 2cs5_A 13 HDNLVLIRMKPDE--NGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKA 89 (119)
T ss_dssp SSCCEEEEECCCS--SSCCSEEEEEEGGG-TEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHH
T ss_pred CCCeEEEEEEeCC--CCCcCEEEecccCC-CCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3446889999975 36799999998765 568999999999999999 899999999999999999999999998652
Q ss_pred cCcccceEeec--CcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKS--NRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~--g~~v~l~V~~~~~ 302 (469)
. .. ...+.|+|.|...
T Consensus 90 ~--------~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 90 S--------CERHSGELMLLVRPNAV 107 (119)
T ss_dssp H--------HHCCSSCEEEEEECCCC
T ss_pred c--------cccCCCEEEEEEEcccc
Confidence 1 11 2478999988654
No 69
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=2.8e-12 Score=105.88 Aligned_cols=85 Identities=28% Similarity=0.346 Sum_probs=71.8
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
+..++|+|.+. .+|||.+.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.+++..++
T Consensus 7 ~~~~~v~l~~~----~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~---- 77 (94)
T 2eeg_A 7 GMPHSVTLRGP----SPWGFRLVGGRDF-SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIK---- 77 (94)
T ss_dssp CCCEEEEECCS----SCCSCCEECCTTT-TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHH----
T ss_pred CceEEEEEeCC----CccCEEEECccCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 44578888443 6899999998875 56899999999999999999999999999999999999988888854
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 78 ------~~g~~v~l~v~R~g 91 (94)
T 2eeg_A 78 ------GCHDHLTLSVSSGP 91 (94)
T ss_dssp ------TCCSCEEEEEECCS
T ss_pred ------cCCCeEEEEEEeCC
Confidence 34677888887754
No 70
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.34 E-value=3.9e-12 Score=107.28 Aligned_cols=89 Identities=28% Similarity=0.403 Sum_probs=72.3
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC--CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG--LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG--L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
...+.|+|.|.. ..+|||.+.++.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 16 ~~~~~v~l~~~~--~~~~G~~~~gg~~~-~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 16 DNLVLIRMKPDE--NGRFGFNVKGGYDQ-KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp CCCEEEEECCCT--TSCCCEEEEEEGGG-TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CCEEEEEEEcCC--CCCCCEEEEccCCC-CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 346889998874 47999999998764 4689999999999999999 999999999999999999999999986521
Q ss_pred CcccceEeecCcEEEEEEEC
Q psy14977 280 GYKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~ 299 (469)
+. +.+..+.|+|.+
T Consensus 93 ~~------~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CE------RHSGELMLLVRP 106 (107)
T ss_dssp GG------SBTTBEEEEEEC
T ss_pred cc------cCCcEEEEEEEc
Confidence 10 002478888876
No 71
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.34 E-value=8.4e-12 Score=102.64 Aligned_cols=84 Identities=24% Similarity=0.472 Sum_probs=71.4
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+++|+|.|.. .+|||++.++.. ..+++|..|.+++||+++| |++||+|++|||+++.++++++++.+|+
T Consensus 4 ~~r~v~l~k~~---~~lG~~i~~~~~--~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~---- 74 (93)
T 3o46_A 4 SVKIIRLVKNR---EPLGATIKKDEQ--TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILA---- 74 (93)
T ss_dssp CCEEEEEEESS---SCCCEEEEECTT--TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHH----
T ss_pred cEEEEEEEeCC---CCccEEEEecCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 35889999974 699999998632 4589999999999999999 9999999999999999999999999965
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.+..
T Consensus 75 ------~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 75 ------QSQGAITFKIIPGS 88 (93)
T ss_dssp ------HCCEEEEEEEECC-
T ss_pred ------hCCCeEEEEEEeCC
Confidence 33457888887643
No 72
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.34 E-value=5.8e-12 Score=103.80 Aligned_cols=81 Identities=36% Similarity=0.558 Sum_probs=71.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..|+|+|.|+. .+|||.+.+. .+++|..|.+++||+++||+.||+|++|||+++.++++.+++..
T Consensus 8 ~~r~v~l~~~~---~~~G~~l~~~-----~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~------- 72 (93)
T 2dls_A 8 VQRCVIIQKDQ---HGFGFTVSGD-----RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKL------- 72 (93)
T ss_dssp CEEEEEEECSS---SSCCEEEECS-----SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHH-------
T ss_pred CCEEEEEEeCC---CceeEEEeCC-----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHh-------
Confidence 45889999975 7899999863 37999999999999999999999999999999999999888887
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++.+..+.|+|.|...
T Consensus 73 ----~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 73 ----IKSGAYVALTLLGSSS 88 (93)
T ss_dssp ----HTSSSEEEEEEECCCC
T ss_pred ----hcCCCEEEEEEEECCC
Confidence 4568899999998654
No 73
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=5.7e-12 Score=108.40 Aligned_cols=91 Identities=31% Similarity=0.516 Sum_probs=76.1
Q ss_pred CCeEEEEEecCCCC----cceEEEEEEcCCCC----CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHH
Q psy14977 202 LPVRTINMNRSQDA----NHGFGICVKGGANN----PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEA 272 (469)
Q Consensus 202 ~~~~~V~L~r~~~~----~~GlGf~i~gg~~~----~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~a 272 (469)
+..++|+|.|.... ..+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.++
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~ 90 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEV 90 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH
Confidence 34678999998521 37899999988753 13489999999999999999 99999999999999999999999
Q ss_pred HHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 273 LKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 273 v~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+.+|+ ..+..+.|+|.|...
T Consensus 91 ~~~l~----------~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 91 QSIIS----------QQSGEAEICVRLDLN 110 (117)
T ss_dssp HHHHS----------CCSSCEEEEEESSCC
T ss_pred HHHHh----------cCCCEEEEEEEECCc
Confidence 99965 356789999988654
No 74
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=3.3e-12 Score=107.57 Aligned_cols=87 Identities=28% Similarity=0.565 Sum_probs=73.8
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCC-----CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANN-----PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~-----~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
...+|+|.|.. .||||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|
T Consensus 7 ~~~~v~l~~~~---~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 7 GRHVACLARSE---RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp EEEEEEECCCT---TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred eeEEEEEEeCC---CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34678888875 7899999998762 24689999999999999999 999999999999999999999999995
Q ss_pred hhcCcccceEeecCcEEEEEEECCCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+ ..+..+.|+|.|...
T Consensus 84 ~----------~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 84 T----------AASPTIALLLEREAG 99 (105)
T ss_dssp T----------SCCSCEEEEEEECCC
T ss_pred H----------cCCCeEEEEEEECCC
Confidence 5 336788999888643
No 75
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.34 E-value=3.3e-12 Score=110.48 Aligned_cols=76 Identities=24% Similarity=0.413 Sum_probs=66.7
Q ss_pred cceEEEEEecCCCcccEEEecccc---cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVE---YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e---~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.|+|.+....+|||++.++.+ ...|++|..|.++|+|+++| |++||+|++|||+++.+++ +++++++|+..+
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~-~~~~~~~l~~~~ 102 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVS-RSEAVALLKRTS 102 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSC-HHHHHHHHHSCC
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCC
Confidence 356677765555799999998863 35689999999999999999 9999999999999999999 999999999876
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
+
T Consensus 103 ~ 103 (118)
T 3b76_A 103 S 103 (118)
T ss_dssp S
T ss_pred C
Confidence 5
No 76
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.34 E-value=1.6e-12 Score=106.66 Aligned_cols=85 Identities=21% Similarity=0.368 Sum_probs=70.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+|+|+|.|+. .+|||++.+..+ ..+++|..|.+++||+++||++||+|++|||+++.++++.++..+|+
T Consensus 3 ~pr~v~l~k~~---~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~----- 72 (91)
T 2vsp_A 3 KPKLCRLAKGE---NGYGFHLNAIRG--LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQ----- 72 (91)
T ss_dssp CEEEEEEECBT---TBTSCCCBCCTT--CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHT-----
T ss_pred CcEEEEEEeCC---CcccEEEEeccC--CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 46899999986 589999987654 35899999999999999999999999999999999999999999965
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.+...
T Consensus 73 -----~~g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 73 -----SSGKNVTLLVCGKKA 87 (91)
T ss_dssp -----TSCSEEEEEEEC---
T ss_pred -----cCCCEEEEEEEeCCc
Confidence 227889999987643
No 77
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=6.7e-12 Score=108.30 Aligned_cols=87 Identities=30% Similarity=0.563 Sum_probs=74.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCC----CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANN----PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~----~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
..++|+|.|.. .+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 17 ~~~~v~l~r~~---~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 17 TEEEINLTRGP---SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEECCS---SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred ceEEEEEEECC---CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35789999985 8999999997763 14689999999999999999 9999999999999999999999998855
Q ss_pred hcCcccceEeecCcEEEEEEECCCC
Q psy14977 278 FEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 278 ~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 94 ----------~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 94 ----------NAGYAVSLRVQHRLQ 108 (120)
T ss_dssp ----------HHCSEEEEEEEEEEE
T ss_pred ----------cCCCeEEEEEEeCCc
Confidence 347788999887644
No 78
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.34 E-value=7.7e-12 Score=106.02 Aligned_cols=86 Identities=28% Similarity=0.514 Sum_probs=72.3
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCC-----------CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHH
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNP-----------GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEA 272 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~-----------~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~a 272 (469)
.++|+|.|.. ..||||+|.++.+.. ..+++|..|.+++||+++||+.||+|++|||+++.++++.++
T Consensus 8 ~~~v~l~~~~--~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 8 EKTVLLQKKD--SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEECCT--TSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH
T ss_pred cEEEEEEECC--CCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 5789998764 479999999987631 137999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcccceEeecCcEEEEEEECCC
Q psy14977 273 LKMCFFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 273 v~~ir~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
+.+|+ ..+..+.|+|.+..
T Consensus 86 ~~~l~----------~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 86 VNMIR----------QGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHH----------HTTTEEEEEEEEEE
T ss_pred HHHHH----------hCCCEEEEEEEECC
Confidence 98865 34678888887654
No 79
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.34 E-value=9.6e-12 Score=107.07 Aligned_cols=88 Identities=20% Similarity=0.417 Sum_probs=71.9
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+.|.|.|.. +.+|||+|.++.+....+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+.
T Consensus 16 ~~~v~l~~~~--~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~---- 89 (119)
T 1x6d_A 16 IHVTILHKEE--GAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQ---- 89 (119)
T ss_dssp EEEEEEECCT--TSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHH----
T ss_pred eEEEEEEeCC--CCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh----
Confidence 5677888864 4899999999886545689999999999999999 99999999999999999999999998652
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.+++.|...
T Consensus 90 -----~~~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 90 -----AREPRQAVIVTRKLT 104 (119)
T ss_dssp -----TTSSSEEEEEEECCC
T ss_pred -----CCCCeEEEEEEcCCC
Confidence 223445566666544
No 80
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.33 E-value=7.2e-12 Score=108.86 Aligned_cols=86 Identities=24% Similarity=0.356 Sum_probs=74.7
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcC
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEG 280 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~ 280 (469)
...++|+|.|.. ..+|||++.++.+. ..+++|..|.+++||+++| |+.||+|++|||+++.++++.+++.+|+
T Consensus 18 ~~~~~v~l~k~~--~~~lG~~i~gg~~~-~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~--- 91 (125)
T 3hpk_A 18 TVPGKVTLQKDA--QNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQ--- 91 (125)
T ss_dssp EEEEEEEEECCT--TSCCCEEEEECSSC-CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH---
T ss_pred CCCeEEEEEeCC--CCCcCEEEeccCCC-CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH---
Confidence 356889999975 47899999998865 5789999999999999999 9999999999999999999999999965
Q ss_pred cccceEeecCcEEEEEEECC
Q psy14977 281 YKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 281 ~~~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.+.
T Consensus 92 -------~~~~~v~l~v~r~ 104 (125)
T 3hpk_A 92 -------EVKGEVTIHYNKL 104 (125)
T ss_dssp -------HSCSEEEEEEEEE
T ss_pred -------cCCCeEEEEEEEC
Confidence 3456688888774
No 81
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.33 E-value=3.9e-12 Score=103.75 Aligned_cols=73 Identities=18% Similarity=0.253 Sum_probs=64.3
Q ss_pred EEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 370 KVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 370 ~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.++++++...+|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.+++ +.+++++++..++
T Consensus 4 ~~~v~~~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~~~~~g~ 76 (89)
T 2q3g_A 4 SFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLT-HIEAQNKIRACGE 76 (89)
T ss_dssp EEEEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCC-HHHHHHHHHTCTT
T ss_pred EEEEEEcCCCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 344555666799999998887777999999999999999999999999999999999998 9999999987654
No 82
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=6e-12 Score=109.31 Aligned_cols=87 Identities=17% Similarity=0.398 Sum_probs=74.8
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
..++|+|.|.. .+|||+|.++.+....+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++
T Consensus 25 ~~~~v~l~k~~---~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~---- 97 (124)
T 2daz_A 25 ELHIIELEKDK---NGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIK---- 97 (124)
T ss_dssp EEEEEEEECCS---SCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHH----
T ss_pred ceEEEEEEeCC---CccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 35788999874 799999999876545699999999999999999 9999999999999999999999988854
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 98 ------~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 98 ------TAPSKVKLVFIRNED 112 (124)
T ss_dssp ------HSCSEEEEEEEECTT
T ss_pred ------cCCCeEEEEEEeCCC
Confidence 445688999887643
No 83
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=6.4e-12 Score=106.13 Aligned_cols=89 Identities=24% Similarity=0.543 Sum_probs=74.8
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEc---CCCC--CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHH
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKG---GANN--PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALK 274 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~g---g~~~--~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~ 274 (469)
.+..++|+|.|.. .+|||+|.+ +.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.
T Consensus 7 ~~~~~~v~l~k~~---~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 83 (107)
T 1wf8_A 7 GLELFPVELEKDE---DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAAT 83 (107)
T ss_dssp CEEEEEEEEECBT---TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHH
T ss_pred CceEEEEEEEECC---CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4456789998875 799999998 4432 13589999999999999999 9999999999999999999999998
Q ss_pred HhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 275 MCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 275 ~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+++ ..+..+.|+|.|...
T Consensus 84 ~~~----------~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 84 VLR----------NTKGNVRFVIGREKP 101 (107)
T ss_dssp HHH----------HCCSEEEEEEEEECC
T ss_pred HHh----------cCCCeEEEEEEeCCC
Confidence 855 447889999988654
No 84
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=9.8e-12 Score=104.29 Aligned_cols=87 Identities=24% Similarity=0.454 Sum_probs=73.6
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC-CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcC
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP-GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEG 280 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~-~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~ 280 (469)
..++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 11 ~~~~v~l~~~~---~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~--- 84 (104)
T 2djt_A 11 GHFSVELVRGY---AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIR--- 84 (104)
T ss_dssp CCEEEEEECCS---SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHH---
T ss_pred ceEEEEEEeCC---CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH---
Confidence 34789999875 79999999876431 3589999999999999999 9999999999999999999999988854
Q ss_pred cccceEeecCcEEEEEEECCCC
Q psy14977 281 YKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 281 ~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 85 -------~~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 85 -------AGGPQLHLVIRRPLS 99 (104)
T ss_dssp -------HTCSEEEEEECCCCC
T ss_pred -------cCCCeEEEEEEECCC
Confidence 357889999987654
No 85
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=2.6e-12 Score=110.85 Aligned_cols=86 Identities=29% Similarity=0.599 Sum_probs=72.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
..++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+
T Consensus 25 ~~~~v~L~k~~---~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~-- 99 (117)
T 2fne_A 25 QCKSITLERGP---DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILK-- 99 (117)
T ss_dssp EEEEEEECCBT---TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH--
T ss_pred ccEEEEEEeCC---CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--
Confidence 46889999986 78999999876431 2489999999999999999 9999999999999999999999999965
Q ss_pred CcccceEeecCcEEEEEEECCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 100 --------~~~~~v~l~v~R~g 113 (117)
T 2fne_A 100 --------RTKGTVTLMVLSSD 113 (117)
T ss_dssp --------HCCSSEEEEEEECS
T ss_pred --------cCCCeEEEEEEeCC
Confidence 23445778777654
No 86
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=1.7e-11 Score=105.42 Aligned_cols=88 Identities=20% Similarity=0.351 Sum_probs=75.4
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.++.|.|.|.. ..+|||.|.++.+....+++|..|.+++||+++| |++||+|++|||+++.++++++++++|+
T Consensus 15 ~~~~v~l~k~~--~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~---- 88 (117)
T 1v62_A 15 GPLMVEIVKTP--GSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLA---- 88 (117)
T ss_dssp SSEEEEEECCT--TCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHH----
T ss_pred CcEEEEEEcCC--CCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 35889999985 3789999998766423459999999999999999 9999999999999999999999999965
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 89 ------~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 89 ------SISEKVRLEILPVPQ 103 (117)
T ss_dssp ------SCSSEEEEEECCBTT
T ss_pred ------hCCCeEEEEEEECCC
Confidence 357899999988654
No 87
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.32 E-value=3.7e-12 Score=111.13 Aligned_cols=88 Identities=26% Similarity=0.515 Sum_probs=75.3
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcC-CCCHHHHHHHhhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFT-GISHEEALKMCFF 278 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~-~~s~~~av~~ir~ 278 (469)
.+++|+|.|.. ..||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++. ++++.+++.+|+
T Consensus 25 ~~~~v~l~k~~--~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~- 101 (128)
T 2db5_A 25 QIEYIDIERPS--TGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQ- 101 (128)
T ss_dssp EEEEEEEECCS--SSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHH-
T ss_pred ceEEEEEEECC--CCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHH-
Confidence 46789999975 479999999876542 2489999999999999999 9999999999999997 999999999965
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 102 ---------~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 102 ---------QTTGSLRLIVAREPV 116 (128)
T ss_dssp ---------HCCSEEEEEEEECCC
T ss_pred ---------cCCCeEEEEEEcCCC
Confidence 357889999988654
No 88
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.32 E-value=6.8e-12 Score=102.69 Aligned_cols=85 Identities=27% Similarity=0.339 Sum_probs=71.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+++|++.+. .+|||++.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++.+.++..+++
T Consensus 3 ~~~~v~~~~~----~~~G~~l~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~----- 72 (91)
T 2pkt_A 3 TTQQIDLQGP----GPWGFRLVGGKDF-EQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIK----- 72 (91)
T ss_dssp EEEEEEEESS----SCCSEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred ccEEEEECCC----CCCCEEEEccCCC-CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 3566777654 7899999987764 46899999999999999999999999999999999999999988865
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 73 -----~~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 73 -----GCTDNLTLTVARSEH 87 (91)
T ss_dssp -----TCSSEEEEEEEEECC
T ss_pred -----cCCCeEEEEEEECCc
Confidence 357888888887654
No 89
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.32 E-value=8.7e-12 Score=103.70 Aligned_cols=85 Identities=21% Similarity=0.395 Sum_probs=67.3
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..+.|+|.|......+|||+|.........+++|..|.+++||+++||+.||+|++|||+++.+++++++.+.++
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~----- 80 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLS----- 80 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH-----
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-----
Confidence 468899999875556899999875433245899999999999999999999999999999999999999988843
Q ss_pred cceEeecCcEEEEEEEC
Q psy14977 283 EGQMLKSNRELSMTVRS 299 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~ 299 (469)
...+.++|..
T Consensus 81 -------~~~l~ltV~~ 90 (94)
T 3kzd_A 81 -------QPSLGLLVRT 90 (94)
T ss_dssp -------SSEEEEEEEE
T ss_pred -------CCeEEEEEEe
Confidence 3567777765
No 90
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.32 E-value=6.3e-12 Score=104.12 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=64.9
Q ss_pred cceEEEEEecCCCcccEEEec-------ccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRG-------GVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVI 439 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~G-------g~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk 439 (469)
..+.|+|.+....+|||.+.+ +.+...+++|..|.++++|+++||++||+|++|||+++.+++ +++++++|+
T Consensus 4 ~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~l~ 82 (96)
T 2ego_A 4 QRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIR-HREIVDIIK 82 (96)
T ss_dssp CEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCC-HHHHHHHHH
T ss_pred ccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHH
Confidence 357788877666799999997 334456899999999999999999999999999999999999 999999999
Q ss_pred hCCC
Q psy14977 440 SFSH 443 (469)
Q Consensus 440 ~~g~ 443 (469)
..++
T Consensus 83 ~~~~ 86 (96)
T 2ego_A 83 ASGN 86 (96)
T ss_dssp HTTT
T ss_pred hCCC
Confidence 8754
No 91
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.32 E-value=1.7e-11 Score=104.04 Aligned_cols=83 Identities=25% Similarity=0.527 Sum_probs=72.4
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
++.|+|.|.. .+|||.|.++.+. +++|..|.+++||+++| |+.||+|++|||+++.++++.+++.+|+
T Consensus 16 ~~~v~l~~~~---~~lG~~l~~~~~~---g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~----- 84 (111)
T 2dlu_A 16 VEEVELINDG---SGLGFGIVGGKTS---GVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR----- 84 (111)
T ss_dssp EEEEEEECCS---SCCCEEEECCSSS---SBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHH-----
T ss_pred eEEEEEEeCC---CccCEEEeccCCC---CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 5789999864 7899999987654 89999999999999999 9999999999999999999999998855
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 85 -----~~g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 85 -----NCGNSVRMLVARDPA 99 (111)
T ss_dssp -----HHCSEEEEEEEESCT
T ss_pred -----hCCCeEEEEEEeCCC
Confidence 347789999987654
No 92
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.32 E-value=3.4e-12 Score=110.54 Aligned_cols=76 Identities=26% Similarity=0.317 Sum_probs=64.2
Q ss_pred cceEEEEEecCCCcccEEEecccc---cCCcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVE---YNLGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e---~~~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.|+|.+....+|||.|.++.+ ...+++|..|.++|+|+++ ||++||+|++|||+++.+++ |.+++.+|+..+
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~-~~~~~~~l~~~~ 102 (120)
T 2iwo_A 24 GLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMT-HTQAVNLLKNAS 102 (120)
T ss_dssp -CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCB-HHHHHHHHHHCC
T ss_pred CcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCC
Confidence 467788876655699999998875 2458999999999999999 69999999999999999999 999999999886
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
+
T Consensus 103 ~ 103 (120)
T 2iwo_A 103 G 103 (120)
T ss_dssp S
T ss_pred C
Confidence 6
No 93
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.32 E-value=6.9e-12 Score=101.78 Aligned_cols=83 Identities=25% Similarity=0.405 Sum_probs=68.3
Q ss_pred EEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccce
Q psy14977 206 TINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQ 285 (469)
Q Consensus 206 ~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~ 285 (469)
++++.+.. ..+|||.+.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.++.++|+.
T Consensus 3 ~~~v~~~~--~~~lG~~l~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~------- 72 (87)
T 2pa1_A 3 ALTVDVAG--PAPWGFRITGGRDF-HTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQ------- 72 (87)
T ss_dssp EEEEEECS--SSCCSEEEEEEGGG-TEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHT-------
T ss_pred EEEEEECC--CCccCEEEecccCC-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-------
Confidence 35555542 47899999988764 568999999999999999999999999999999999999999999662
Q ss_pred EeecCcEEEEEEECCC
Q psy14977 286 MLKSNRELSMTVRSPS 301 (469)
Q Consensus 286 Ilr~g~~v~l~V~~~~ 301 (469)
....+.|+|.|..
T Consensus 73 ---~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 73 ---SPSPLRLQLDRIT 85 (87)
T ss_dssp ---CCSSEEEEEEECC
T ss_pred ---CCCeEEEEEEecC
Confidence 2367778877753
No 94
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1.8e-11 Score=103.81 Aligned_cols=86 Identities=28% Similarity=0.472 Sum_probs=74.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
..++|+|.|.. .||||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++
T Consensus 8 ~~~~v~l~~~~---~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~-- 82 (110)
T 1um1_A 8 YVFTVELERGP---SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR-- 82 (110)
T ss_dssp CEEEEEEECCT---TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH--
T ss_pred cEEEEEEEECC---CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--
Confidence 35789999975 79999999876542 3689999999999999999 9999999999999999999999998855
Q ss_pred CcccceEeecCcEEEEEEECCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 83 --------~~~~~v~l~v~R~~ 96 (110)
T 1um1_A 83 --------HGGKKMRFLVAKSD 96 (110)
T ss_dssp --------TCCSEEEEEEECCC
T ss_pred --------cCCCeEEEEEEeCC
Confidence 34788899998864
No 95
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.31 E-value=2.5e-12 Score=109.22 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=65.5
Q ss_pred cceEEEEEecCCCcccEEEeccccc--CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY--NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~--~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.|+|.++...+|||++.++.+. ..+++|.+|.++++|+++| |++||+|++|||+++.+++ |++++++|+..
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~ 81 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMS-NDDAVRVLRDI 81 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCC-HHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhc
Confidence 4567777655567999999987543 4799999999999999999 9999999999999999999 99999999876
No 96
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.31 E-value=2e-11 Score=106.78 Aligned_cols=88 Identities=20% Similarity=0.287 Sum_probs=74.2
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
...+|+|.|.. .||||+|.++.+. ..+++|..|.+++||+++| |+.||+|++|||+++.++++.+++++|+.
T Consensus 18 ~~~~v~l~~~~---~g~G~~i~g~~~~-~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~--- 90 (129)
T 2kpk_A 18 KFIHTKLRKSS---RGFGFTVVGGDEP-DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQS--- 90 (129)
T ss_dssp EEEEEEEEECS---SCCSEEEEEEEET-TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHH---
T ss_pred cEEEEEEEECC---CcccEEEeCccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh---
Confidence 45678888865 7999999986653 4679999999999999999 99999999999999999999999999762
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 91 -----~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 91 -----IPIGASVDLELCRGYP 106 (129)
T ss_dssp -----SCTTEEEEEEEEECSC
T ss_pred -----CCCCCeEEEEEEeCCC
Confidence 1227789999988654
No 97
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.31 E-value=7.4e-12 Score=104.74 Aligned_cols=86 Identities=26% Similarity=0.467 Sum_probs=74.0
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
..+++|+|.|.. .||||++.++.+ ..+++|..|.+++||+++||+.||+|++|||+++.++++.+++..|+
T Consensus 5 ~~~r~v~l~k~~---~g~G~~l~~~~~--~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~---- 75 (102)
T 2d90_A 5 SSGRVVVIKKGS---NGYGFYLRAGPE--QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIR---- 75 (102)
T ss_dssp SSSEEEEEECCS---SSSSCEEEECSS--SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHH----
T ss_pred CCCEEEEEeeCC---CCccEEEEeecC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 346899999975 799999998654 35899999999999999999999999999999999999999988854
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.+...
T Consensus 76 ------~~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 76 ------KGGDQTTLLVLDKEA 90 (102)
T ss_dssp ------HSTTEEEEEECSTTC
T ss_pred ------cCCCEEEEEEEECCC
Confidence 347889999987644
No 98
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.31 E-value=3.2e-11 Score=102.33 Aligned_cols=98 Identities=20% Similarity=0.299 Sum_probs=77.5
Q ss_pred CCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCC
Q psy14977 191 HRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGI 267 (469)
Q Consensus 191 ~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~ 267 (469)
+.|+.+.+. ....++|.+.. .||||+|.+..+.. ..+++|..|.+++||+++| |++||+|++|||+++.++
T Consensus 2 s~y~~~~~~---~~~~~~l~~~~---~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~ 75 (111)
T 2koj_A 2 SVYNTKKVG---KRLNIQLKKGT---EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGK 75 (111)
T ss_dssp CCCCCSSSC---EEEEEEEECBT---TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTS
T ss_pred CcccCcccC---cEEEEEEEECC---CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCC
Confidence 456665443 35667777764 79999999876421 2589999999999999999 999999999999999999
Q ss_pred CHHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 268 SHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 268 s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++.+++.+|+. ...+..+.|+|.|...
T Consensus 76 ~~~~~~~~l~~--------~~~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 76 SQEEVVSLLRS--------TKMEGTVSLLVFRQEE 102 (111)
T ss_dssp CHHHHHHHHHH--------CCCSSEEEEEEEECCC
T ss_pred CHHHHHHHHHh--------CCCCCeEEEEEEeCCC
Confidence 99999988651 1237889999987654
No 99
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.31 E-value=7.2e-12 Score=101.68 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=65.0
Q ss_pred EEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 370 KVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 370 ~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
.+++.++...+|||.+.++.+...+++|..|.++|+|+++||++||+|++|||+++.+++ ++++.++|+...
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~ 74 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGML-HAEAQSKIRQSP 74 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCC-HHHHHHHHHTCC
T ss_pred EEEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCC
Confidence 456666666799999998887777999999999999999999999999999999999999 999999999864
No 100
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=103.52 Aligned_cols=86 Identities=37% Similarity=0.651 Sum_probs=73.3
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+++|+|.|.. ...|||++.+..+. ..+++|..|.+++||+++||++||+|++|||+++.++++.+++..+
T Consensus 10 ~~~~v~l~~~~--~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~------ 80 (100)
T 2eeh_A 10 IIHSVRVEKSP--AGRLGFSVRGGSEH-GLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVL------ 80 (100)
T ss_dssp EECCEEECCCS--SSSCSEEEECCTTT-TCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHH------
T ss_pred eEEEEEEEECC--CCCccEEEEccccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhh------
Confidence 46779998875 24699999987654 4689999999999999999999999999999999999988888884
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+.+..+.|+|.|...
T Consensus 81 -----~~~~~v~l~v~R~g~ 95 (100)
T 2eeh_A 81 -----TSSSRLHMMVRRMGS 95 (100)
T ss_dssp -----HSCSSEEEEEEECSC
T ss_pred -----cCCCEEEEEEEECCc
Confidence 447888999888654
No 101
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.31 E-value=8.7e-12 Score=107.02 Aligned_cols=88 Identities=32% Similarity=0.496 Sum_probs=75.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCC--------CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHH
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNP--------GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEAL 273 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~--------~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av 273 (469)
.+++|+|.|.. +.+|||+|.++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++
T Consensus 15 ~~~~v~l~k~~--~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 15 PPRIVEIFREP--NVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp CCEEEEECCCS--SSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCEEEEEEeCC--CCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 35889999974 489999999987531 3589999999999999999 999999999999999999999999
Q ss_pred HHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 274 KMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 274 ~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
.+++ ..+..+.|+|.+...
T Consensus 93 ~~~~----------~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 93 EAIK----------NAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHH----------TSCSSEEEEECCBSC
T ss_pred HHHH----------cCCCeEEEEEEECCC
Confidence 8855 346788888877654
No 102
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.31 E-value=2e-11 Score=105.71 Aligned_cols=99 Identities=20% Similarity=0.287 Sum_probs=77.3
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEc
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPF 264 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v 264 (469)
||+..|+.+.+. ....|+|.+.. .+|||+|.+..+.. ..+++|..|.+++||+++| |++||+|++|||+++
T Consensus 18 D~~~~y~~~~~~---~~~~v~l~~~~---~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v 91 (121)
T 2kom_A 18 YFQGSYNTKKIG---KRLNIQLKKGT---EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDL 91 (121)
T ss_dssp ---CCCCCCCSC---EEEEEEEECCT---TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEEC
T ss_pred CccccccCccCC---eEEEEEEEcCC---CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEc
Confidence 889888887654 34567777764 78999999876421 2589999999999999999 999999999999999
Q ss_pred CCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECC
Q psy14977 265 TGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 265 ~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~ 300 (469)
.++++.+++++|+. ...+..+.|+|.|.
T Consensus 92 ~~~~~~~~~~~l~~--------~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 92 VGKSQEEVVSLLRS--------TKMEGTVSLLVFRQ 119 (121)
T ss_dssp TTSCHHHHHHHHHH--------CCSSCEEEEEEEEC
T ss_pred CCCCHHHHHHHHhc--------CCCCCEEEEEEEeC
Confidence 99999999988652 12367888888764
No 103
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.31 E-value=1.9e-11 Score=100.94 Aligned_cols=87 Identities=34% Similarity=0.568 Sum_probs=72.6
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCC-----CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANN-----PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~-----~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
...++.+.+.. .||||+|.++.+. ...+++|..|.+++||+++||++||+|++|||+++.++++.+++..++
T Consensus 3 ~~~~v~~~~~~---~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 3 EELTLTILRQT---GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp CEEEEEEECBT---TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeCC---CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 34667888874 8999999987652 146899999999999999999999999999999999999987777643
Q ss_pred hcCcccceEeecCcEEEEEEECCCC
Q psy14977 278 FEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 278 ~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 80 ----------~~g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 80 ----------GAGTAVQMRVWRERE 94 (97)
T ss_dssp ----------TSCSEEEEEEECCSS
T ss_pred ----------CCCCeEEEEEEeCCc
Confidence 457889999988653
No 104
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.31 E-value=9.4e-12 Score=104.04 Aligned_cols=84 Identities=27% Similarity=0.434 Sum_probs=70.2
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcC
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEG 280 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~ 280 (469)
.+++.|.|.|.. +.+|||++....+ .+++|..|.+++||+++| |++||+|++|||+++.++++++++++|+
T Consensus 11 ~~~~~v~l~K~~--~~~lG~~l~~~~~---~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~--- 82 (97)
T 2ejy_A 11 HMVRLIQFEKVT--EEPMGICLKLNEK---QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMK--- 82 (97)
T ss_dssp --CEEEEEEECS--SSCCSEEEEECTT---CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHH---
T ss_pred CccEEEEEEeCC--CCCeeEEEEeCCC---CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH---
Confidence 346899999986 3789999987543 389999999999999999 9999999999999999988899999966
Q ss_pred cccceEeecCcEEEEEEECC
Q psy14977 281 YKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 281 ~~~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.+.
T Consensus 83 -------~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 83 -------ETKGMISLKVIPN 95 (97)
T ss_dssp -------HCCEEEEEEEECC
T ss_pred -------cCCCeEEEEEEEC
Confidence 2356788887753
No 105
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.31 E-value=7.3e-12 Score=101.76 Aligned_cols=71 Identities=13% Similarity=0.215 Sum_probs=63.0
Q ss_pred EEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 372 ELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 372 ~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
++.++...+|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.+++ +++++++++..++
T Consensus 6 ~v~l~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~~~~~g~ 76 (88)
T 2uzc_A 6 SVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMT-HLEAQNKIKGCTG 76 (88)
T ss_dssp EEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC-HHHHHHHHHTCCS
T ss_pred EEEEcCCCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 3444556799999999887777999999999999999999999999999999999999 9999999987644
No 106
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.31 E-value=7.5e-12 Score=107.74 Aligned_cols=76 Identities=20% Similarity=0.224 Sum_probs=66.7
Q ss_pred cceEEEEEecCCCcccEEEeccccc-CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.+.|.+....+|||.+.++.+. ..|++|..|.++++|+++| |++||+|++|||+++.+++ |.+++.+|+..+.
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~-~~~~~~~l~~~~~ 92 (119)
T 1x6d_A 15 GIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTT-HHDALAILRQARE 92 (119)
T ss_dssp TEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCC-HHHHHHHHHHTTS
T ss_pred CeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 4566667665667999999988763 4699999999999999999 9999999999999999999 9999999988765
No 107
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.30 E-value=1.1e-11 Score=109.02 Aligned_cols=94 Identities=28% Similarity=0.485 Sum_probs=75.0
Q ss_pred CCCeEEEEEecCC-------CCcceEEEEEEcCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHH
Q psy14977 201 QLPVRTINMNRSQ-------DANHGFGICVKGGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHE 270 (469)
Q Consensus 201 ~~~~~~V~L~r~~-------~~~~GlGf~i~gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~ 270 (469)
...+..++|.|.. ....+|||+|.++++.. ..+++|..|.+++||+++| |++||+|++|||+++.+++++
T Consensus 25 ~~~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~ 104 (131)
T 1wfg_A 25 DRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFE 104 (131)
T ss_dssp SEEEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHH
T ss_pred CceeeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 3445667777761 23578999999876542 3489999999999999999 999999999999999999999
Q ss_pred HHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 271 EALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 271 ~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+++++|+. .+.+..+.|+|.|...
T Consensus 105 ~~~~~l~~--------~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 105 EVYNIILE--------SKPEPQVELVVSRSGP 128 (131)
T ss_dssp HHHHHHHH--------TSSSSEEEEEEEEECS
T ss_pred HHHHHHHh--------cCCCCEEEEEEEcCCC
Confidence 99999762 2245889999887643
No 108
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.30 E-value=5.6e-12 Score=101.68 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=62.8
Q ss_pred EEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 372 ELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 372 ~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+|+++...+|||.+.++.+...+++|..|.++|+|+++||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 4 ~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 74 (85)
T 1rgw_A 4 SVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMT-HLEAQNKIKSASY 74 (85)
T ss_dssp EEEECCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCC-HHHHHHHHTTCSS
T ss_pred EEEEeCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcC-HHHHHHHHHcCCC
Confidence 3444555799999999887777999999999999999999999999999999999998 9999999986544
No 109
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=5.8e-12 Score=105.20 Aligned_cols=86 Identities=43% Similarity=0.796 Sum_probs=72.2
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.++|+|.+.. .+.+|||.|.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.+++..
T Consensus 9 ~~~v~l~~~~-~~~~lG~~~~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~-------- 78 (101)
T 1uez_A 9 VRLVSLRRAK-AHEGLGFSIRGGSEH-GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKA-------- 78 (101)
T ss_dssp CEEECCCCCC-TTTCSSEEEEECTTT-TCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHH--------
T ss_pred cEEEEEEECC-CCCcccEEEeCCCCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHh--------
Confidence 4778887753 458999999988764 568999999999999999999999999999999999999887777
Q ss_pred ceEeecCcEEEEEEECCCC
Q psy14977 284 GQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~~ 302 (469)
++.+..+.|+|.|...
T Consensus 79 ---~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 79 ---LKGSKKLVLSVYSAGR 94 (101)
T ss_dssp ---SSSSSSCCEEECCCCC
T ss_pred ---hcCCCeEEEEEEECCc
Confidence 4556678888877644
No 110
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1.3e-11 Score=103.85 Aligned_cols=74 Identities=38% Similarity=0.469 Sum_probs=67.0
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.|+|.+..+..|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.+++ +++++++|+..
T Consensus 15 ~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~l~~~ 88 (104)
T 1wi2_A 15 LPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIE-HSKAVEILKTA 88 (104)
T ss_dssp CCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCC-HHHHHHHHHHS
T ss_pred CCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHhCC
Confidence 357788877666799999998876667999999999999999999999999999999999999 99999999983
No 111
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.30 E-value=8.8e-12 Score=104.75 Aligned_cols=79 Identities=19% Similarity=0.351 Sum_probs=64.6
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCC------CCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGAN------NPGVGVYISRVEEGSIAERAGLRPGDSILQVNG 261 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~------~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG 261 (469)
+|++.+.. ++|+|.|.. ..+|||+|.+... ....+++|..|.+++||+++||++||+|++|||
T Consensus 9 ~p~s~~~~---------~~v~l~~~~--~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng 77 (104)
T 2z17_A 9 SDFSWSQR---------KLVTVEKQD--NETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANING 77 (104)
T ss_dssp --CCCSCC---------CEEEEECCT--TSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETT
T ss_pred ccCCCCcc---------eEEEEEeCC--CCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECC
Confidence 66666554 778898874 3689999997321 114689999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHhh
Q psy14977 262 IPFTGISHEEALKMCF 277 (469)
Q Consensus 262 ~~v~~~s~~~av~~ir 277 (469)
+++.++++++++++|+
T Consensus 78 ~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 78 VSTEGFTYKQVVDLIR 93 (104)
T ss_dssp EECTTCCHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHH
Confidence 9999999999999976
No 112
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.30 E-value=1.3e-11 Score=104.31 Aligned_cols=78 Identities=28% Similarity=0.587 Sum_probs=66.9
Q ss_pred CcceEEEEEEcCCCCC----CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeec
Q psy14977 215 ANHGFGICVKGGANNP----GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKS 289 (469)
Q Consensus 215 ~~~GlGf~i~gg~~~~----~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~ 289 (469)
.+.+|||+|.+|.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++ ..
T Consensus 11 ~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~----------~~ 80 (106)
T 4amh_A 11 GSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALK----------NT 80 (106)
T ss_dssp -CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH----------SC
T ss_pred CCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHh----------CC
Confidence 3589999999998752 2389999999999999999 9999999999999999999999998865 44
Q ss_pred CcEEEEEEECCCC
Q psy14977 290 NRELSMTVRSPSI 302 (469)
Q Consensus 290 g~~v~l~V~~~~~ 302 (469)
+..+.|+|.|...
T Consensus 81 ~~~v~l~v~R~~~ 93 (106)
T 4amh_A 81 SDFVYLKVAKPGS 93 (106)
T ss_dssp CSEEEEEEECCSS
T ss_pred CCeEEEEEEeCCC
Confidence 6688888887643
No 113
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=1.1e-11 Score=101.40 Aligned_cols=73 Identities=8% Similarity=0.014 Sum_probs=64.0
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHH-cCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAER-AGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~-aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+..+.+|||++.+.. ..+++|.+|.++|+|++ +||++||+|++|||+++.+++ |++++++|+....
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~--~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~-~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNE--LNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQT-VEQLQKMLREMRG 75 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSC--GGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSC-HHHHHHHHHHCCE
T ss_pred eEEEEEEeCCCCceeEEEEeCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHhcCCC
Confidence 3678888777789999999643 25899999999999999 669999999999999999999 9999999998744
No 114
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.29 E-value=1.8e-11 Score=103.32 Aligned_cols=91 Identities=18% Similarity=0.422 Sum_probs=73.9
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCC----CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHH
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANN----PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKM 275 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~----~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ 275 (469)
++...+|+|.|.. ...+|||++.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+
T Consensus 10 ~~~~~~v~l~r~~-~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 88 (108)
T 2jre_A 10 GFSLYSVELFREK-DTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEV 88 (108)
T ss_dssp SCEEEEEEEECCS-TTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHH
T ss_pred CcEEEEEEEEecC-CCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3456778886422 358999999987643 13589999999999999999 99999999999999999999999988
Q ss_pred hhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 276 CFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 276 ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++ ..+..+.|+|.|...
T Consensus 89 l~----------~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 89 LR----------NAGNPVRLLLIRRLP 105 (108)
T ss_dssp HH----------HHCSEEEEEEEECCC
T ss_pred HH----------cCCCeEEEEEEeCCc
Confidence 55 357788888877543
No 115
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=104.22 Aligned_cols=85 Identities=24% Similarity=0.366 Sum_probs=73.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+|+|+|.|.. .+|||.|.+... ..+++|..|.+++||+++||+.||+|++|||+++.++++.+++..++
T Consensus 8 ~~r~v~l~k~~---~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~----- 77 (106)
T 2eei_A 8 QPRLCYLVKEG---GSYGFSLKTVQG--KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVK----- 77 (106)
T ss_dssp SSEEEEEECCS---SSCSCCEECCSS--CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred CCEEEEEEECC---CCCCEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 46899999963 899999987654 45899999999999999999999999999999999999999988854
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.+...
T Consensus 78 -----~~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 78 -----KSGSRVMFLLVDKET 92 (106)
T ss_dssp -----HHCSEEEEEECCTTT
T ss_pred -----hCCCeEEEEEEcCch
Confidence 346788888887654
No 116
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.29 E-value=1.4e-11 Score=100.89 Aligned_cols=75 Identities=20% Similarity=0.306 Sum_probs=65.4
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+...|+|.+....+|||.+.++.+ ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +++++.+++..++
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 79 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRN-DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNAT-QEAVAALLKCSLG 79 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSS-SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCC-HHHHHHHHHHCCS
T ss_pred eEEEEEEEeCCCCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 356777766666799999997653 4699999999999999999 9999999999999999999 9999999987655
No 117
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.29 E-value=1.3e-11 Score=103.98 Aligned_cols=84 Identities=26% Similarity=0.451 Sum_probs=71.5
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
++.|+|.|.++ .+|||.+....+ ..+++|..|.+++||+++||+.||+|++|||+++.++++.+++..|+
T Consensus 2 ~r~v~l~~~~~--~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~------ 71 (106)
T 3ngh_A 2 PRESKLSKQEG--QNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR------ 71 (106)
T ss_dssp CEEEEEECCTT--CCCCCEEECCTT--CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHH------
T ss_pred CEEEEEEeCCC--CeeCEEEEEEeC--CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH------
Confidence 57899999863 567777776654 35899999999999999999999999999999999999999998854
Q ss_pred ceEeecCcEEEEEEECCC
Q psy14977 284 GQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.+..
T Consensus 72 ----~~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 72 ----KSGNSVTLLVLDGD 85 (106)
T ss_dssp ----HTTTEEEEEEECHH
T ss_pred ----hCCCEEEEEEEECC
Confidence 45788999998754
No 118
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=4.8e-11 Score=101.15 Aligned_cols=86 Identities=36% Similarity=0.579 Sum_probs=72.4
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC-----CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN-----PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~-----~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
..++.|.+.. .||||+|.++.+. ...+++|..|.+++||+++||++||+|++|||+++.++.+.+++..++
T Consensus 16 ~~~~~l~~~~---~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~- 91 (110)
T 1x5q_A 16 ELTLTILRQT---GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALR- 91 (110)
T ss_dssp EEEEEEECSS---SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-
T ss_pred eEEEEEecCC---CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhh-
Confidence 4567788764 8999999987652 246899999999999999999999999999999999999988887743
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 92 ---------~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 92 ---------GAGTAVQMRVWRESG 106 (110)
T ss_dssp ---------SCCSEEEEEEEECSS
T ss_pred ---------CCCCeEEEEEEECCc
Confidence 357899999988654
No 119
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=1.1e-11 Score=105.49 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=64.1
Q ss_pred cceEEEEEecCCCcccEEEeccccc--CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY--NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~--~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.|++ .++.+|||.+.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ |++++++|+...
T Consensus 15 ~~~~v~l--~k~~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~-~~~~~~~l~~~~ 90 (109)
T 1wi4_A 15 AFRVITV--TKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVS-FEEAKSIITRAK 90 (109)
T ss_dssp TEEEEEE--CCSSCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCC-HHHHHHHHHHSC
T ss_pred cEEEEEE--eCCCccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHccc
Confidence 3456666 4458999999998753 3479999999999999999 9999999999999999999 999999999876
No 120
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.29 E-value=1.4e-11 Score=113.31 Aligned_cols=87 Identities=22% Similarity=0.531 Sum_probs=73.9
Q ss_pred CCCCeEEEEEecCCCCcceEEEEEEc---CCCC--CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHH
Q psy14977 200 DQLPVRTINMNRSQDANHGFGICVKG---GANN--PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEAL 273 (469)
Q Consensus 200 ~~~~~~~V~L~r~~~~~~GlGf~i~g---g~~~--~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av 273 (469)
..+...+|+|.|+. .||||+|.+ +.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++
T Consensus 77 ~~~~~~~v~l~k~~---~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~ 153 (170)
T 3egg_C 77 ERLELFPVELEKDS---EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAA 153 (170)
T ss_dssp TTSEEEEEEEECBT---TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHH
T ss_pred CCceEEEEEEEeCC---CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 45556789999985 689999998 3332 13689999999999999999 999999999999999999999999
Q ss_pred HHhhhcCcccceEeecCcEEEEEEEC
Q psy14977 274 KMCFFEGYKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 274 ~~ir~~~~~~~~Ilr~g~~v~l~V~~ 299 (469)
.+|+ ..+..|.|+|.|
T Consensus 154 ~~l~----------~~g~~v~L~V~R 169 (170)
T 3egg_C 154 SVLR----------NTKGRVRFMIGR 169 (170)
T ss_dssp HHHH----------HCCSEEEEEEEE
T ss_pred HHHH----------cCCCEEEEEEEe
Confidence 9976 356788888876
No 121
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.29 E-value=1.2e-11 Score=107.52 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=68.7
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+....+|||.+.++.+...+++|..|.++|+|+++| |++||+|++|||+++.+++ |++++++|+..++
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~-~~~~~~~l~~~~~ 95 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKT-KVEVAKMIQEVKG 95 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHHSCS
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 35677777666679999999998777899999999999999999 9999999999999999999 9999999998766
No 122
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.29 E-value=2.2e-11 Score=102.54 Aligned_cols=87 Identities=23% Similarity=0.517 Sum_probs=71.8
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCC--CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANN--PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~--~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
....+|+| |. ..||||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++
T Consensus 10 ~~~~~v~l-~~---~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~- 84 (106)
T 3axa_A 10 PEIITVTL-KK---QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMT- 84 (106)
T ss_dssp CCEEEEEE-EC---SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH-
T ss_pred ceEEEEEE-CC---CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-
Confidence 34566777 54 38899999875432 14589999999999999999 9999999999999999999999998854
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 85 ---------~~g~~v~l~v~R~~~ 99 (106)
T 3axa_A 85 ---------RTSSVVTLEVAKQGA 99 (106)
T ss_dssp ---------TCCSEEEEEEECCCS
T ss_pred ---------cCCCeEEEEEEeCCc
Confidence 457889999988654
No 123
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.28 E-value=6.6e-12 Score=110.61 Aligned_cols=76 Identities=18% Similarity=0.263 Sum_probs=66.6
Q ss_pred cceEEEEEecCCCcccEEEeccccc------------CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY------------NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKD 434 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~------------~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~ea 434 (469)
..+.|+|.+....+|||+|.++... ..|++|..|.++++|+++||++||+|++|||+++.+++ ++++
T Consensus 27 ~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~-~~~~ 105 (132)
T 3l4f_D 27 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVG-HRQV 105 (132)
T ss_dssp CCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSC-HHHH
T ss_pred CCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHH
Confidence 4577888766667999999988752 23799999999999999999999999999999999999 9999
Q ss_pred HHHHHhCCC
Q psy14977 435 FDTVISFSH 443 (469)
Q Consensus 435 v~~Lk~~g~ 443 (469)
+++|+..++
T Consensus 106 ~~~l~~~g~ 114 (132)
T 3l4f_D 106 VNMIRQGGN 114 (132)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHcCCC
Confidence 999998765
No 124
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.28 E-value=1.4e-11 Score=100.42 Aligned_cols=72 Identities=18% Similarity=0.094 Sum_probs=62.9
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.+.|.|.+. ..+|||.+.++.+...+++|..|.++|+|+++| |++||+|++|||+++.+++ +++++++|+..
T Consensus 3 ~~~v~l~~~-~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~-~~~~~~~l~~~ 75 (90)
T 2q9v_A 3 EQDIFLWRK-ETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKS-HQLVVQLMQQA 75 (90)
T ss_dssp EEEEEEECB-TTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSC-HHHHHHHHHHH
T ss_pred cEEEEEEEC-CCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 356666543 358999999887666789999999999999999 9999999999999999999 99999999875
No 125
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=7.8e-12 Score=105.39 Aligned_cols=72 Identities=18% Similarity=0.184 Sum_probs=62.8
Q ss_pred ceEEEEEecCCCcccEEEecccccCCc-EEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLG-IFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~G-I~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.+.|.|. +...+|||.|.++.+...+ ++|..|.++++|+++| |++||+|++|||+++.+++ |++++++|+..
T Consensus 7 ~~~v~l~-k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~ 80 (103)
T 1ufx_A 7 GTLVRVK-KSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKE-HREAARIIAEA 80 (103)
T ss_dssp SEEEEEE-CCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCB-HHHHHHHHHHH
T ss_pred eEEEEEE-cCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHHh
Confidence 4666663 3446999999998875545 4999999999999999 9999999999999999999 99999999985
No 126
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.28 E-value=2.5e-12 Score=103.47 Aligned_cols=80 Identities=35% Similarity=0.524 Sum_probs=68.4
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+++|+|.|.. .||||++.+. .+++|..|.+++||+++||+.||+|++|||+++.++++.+++.+++
T Consensus 2 ~~r~v~l~~~~---~g~G~~~~~~-----~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~----- 68 (83)
T 2kv8_A 2 RVRSVEVARGR---AGYGFTLSGQ-----APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIG----- 68 (83)
T ss_dssp CEEEEEECCCS---SCCSCBCCCS-----SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHT-----
T ss_pred CcEEEEEEeCC---CcccEEEEcC-----CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 46889999986 7899988763 2799999999999999999999999999999999999999998854
Q ss_pred cceEeecCcEEEEEEECC
Q psy14977 283 EGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.|.
T Consensus 69 -----~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 69 -----KCSGVLHMVIAEG 81 (83)
T ss_dssp -----TCSSCEEEEEECC
T ss_pred -----hCCCeEEEEEEcC
Confidence 3345688888774
No 127
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.28 E-value=1.4e-11 Score=102.41 Aligned_cols=85 Identities=27% Similarity=0.406 Sum_probs=69.3
Q ss_pred EEEEEecCCCCcceEEEEEEcCCCCC------CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 205 RTINMNRSQDANHGFGICVKGGANNP------GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 205 ~~V~L~r~~~~~~GlGf~i~gg~~~~------~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
.+|+|.|.. .+|||++.+..... ..+++|..|.+++||+++||+.||+|++|||+++.++++++++..|+
T Consensus 4 ~~v~l~~~~---~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~- 79 (99)
T 3khf_A 4 PPIVIHSSG---KKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL- 79 (99)
T ss_dssp CCEEEEC-C---CCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-
T ss_pred CCEEEEeCC---CCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-
Confidence 357788764 78999998754321 13679999999999999999999999999999999999999998854
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+.+..+.|+|.+...
T Consensus 80 ---------~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 80 ---------KSGNKISLRTTALEN 94 (99)
T ss_dssp ---------HSCSEEEEEEECSCS
T ss_pred ---------cCCCEEEEEEEECCC
Confidence 467889999988543
No 128
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.28 E-value=1.6e-11 Score=103.00 Aligned_cols=84 Identities=26% Similarity=0.445 Sum_probs=71.3
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
..+|+|... .+|||+|.++.+. ..+++|..|.+++||+++||+.||+|++|||+++.++++.+++..++
T Consensus 6 ~~~v~l~~~----~~~G~~l~gg~~~-~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~------ 74 (103)
T 1wf7_A 6 SGSVSLVGP----APWGFRLQGGKDF-NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIK------ 74 (103)
T ss_dssp CEEEEEESS----SCCSCCEEEETTT-TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHH------
T ss_pred EEEEEEeCC----CccCEEEeccccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH------
Confidence 467777743 7899999998875 56799999999999999999999999999999999999988888754
Q ss_pred ceEeecCcEEEEEEECCCC
Q psy14977 284 GQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 75 ----~~g~~v~l~v~R~g~ 89 (103)
T 1wf7_A 75 ----ACTGSLNMTLQRASA 89 (103)
T ss_dssp ----HCSSEEEEEECCCSC
T ss_pred ----cCCCeEEEEEEeCCC
Confidence 346788999887654
No 129
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.28 E-value=1e-11 Score=108.59 Aligned_cols=92 Identities=28% Similarity=0.499 Sum_probs=75.1
Q ss_pred CCCCCeEEEEEecCCCCcceEEEEEEcCCCC--------CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCH
Q psy14977 199 IDQLPVRTINMNRSQDANHGFGICVKGGANN--------PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISH 269 (469)
Q Consensus 199 ~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~--------~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~ 269 (469)
......+.|+|.|.. .+.+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++
T Consensus 25 ~~~~~~r~v~l~k~~-~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 103 (128)
T 1nf3_C 25 ILPETHRRVRLCKYG-TEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSL 103 (128)
T ss_dssp TSCTTCEEEEECCSS-TTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCH
T ss_pred cCCCccEEEEEEECC-CCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 344456899999974 247899999987531 02479999999999999999 99999999999999999999
Q ss_pred HHHHHHhhhcCcccceEeecCcEEEEEEECCC
Q psy14977 270 EEALKMCFFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 270 ~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
++++.+|+ ..+..+.|+|.+..
T Consensus 104 ~~~~~~l~----------~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 104 DQVTDMMI----------ANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHHH----------HTTTSEEEEEECCC
T ss_pred HHHHHHHH----------cCCCeEEEEEEECC
Confidence 99999965 34566888887754
No 130
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.27 E-value=8.8e-12 Score=105.09 Aligned_cols=75 Identities=11% Similarity=0.177 Sum_probs=66.7
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC--CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG--LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG--Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.+.|.+....+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ |.+++.+|+..+
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~-~~~~~~~i~~~~ 93 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHT-HDQVVLFIKASC 93 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCC-HHHHHHHHHCGG
T ss_pred CEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCC-HHHHHHHHHhcc
Confidence 45667776555569999999987766789999999999999999 9999999999999999999 999999998864
No 131
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=3.3e-11 Score=102.94 Aligned_cols=89 Identities=29% Similarity=0.502 Sum_probs=74.9
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCC------CCcEEEEEeCCCCHHHH-cCCCCCCEEEEECCEEcCCCCHHHHHH
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNP------GVGVYISRVEEGSIAER-AGLRPGDSILQVNGIPFTGISHEEALK 274 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~------~~gi~V~~V~pgspA~~-aGL~~GD~Il~VNG~~v~~~s~~~av~ 274 (469)
+.+++|+|.|.. ..+|||+|.++.+.. ..+++|..|.+++||++ +||++||+|++|||+++.++++.++++
T Consensus 9 ~~~~~v~l~~~~--~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 9 LQTSDVVIHRKE--NEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCEEEEEECCT--TSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred ccceEEEEEECC--CCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 345889999864 479999999875431 12679999999999999 999999999999999999999999999
Q ss_pred HhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 275 MCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 275 ~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+|+ ..+..+.|+|.|...
T Consensus 87 ~l~----------~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 87 LIK----------DAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHH----------HTTTEEEEEECCCSC
T ss_pred HHH----------cCCCeEEEEEEeCCc
Confidence 965 367899999988654
No 132
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.27 E-value=5.2e-13 Score=140.50 Aligned_cols=143 Identities=16% Similarity=0.169 Sum_probs=49.5
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCCCCCCCCCCC
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSIPPQAPRNHP 311 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~~~~~~~~~~ 311 (469)
.+++|..|.+++||+++||+.||+|++|||+++.++ .++...|.. .+.++.+.|+|.|............
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~--~~l~~~l~~--------~~~g~~v~l~v~R~g~~~~~~v~~~ 355 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF--AALRAQVGT--------MPVGSKLTLGLLRDGKQVNVNLELQ 355 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS--HHHHHHTTS--------SBTTCCCEEEEESSSCEEECCCC--
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHh--------cCCCCEEEEEEEECCEEEEEEEEEe
Confidence 589999999999999999999999999999999987 555656431 2346777888777543110000000
Q ss_pred CCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCccccCCCCCcceEEEEEecCCCcccEEEeccccc
Q psy14977 312 LPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNIEPGQSLGLMIRGGVEY 391 (469)
Q Consensus 312 ~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~~~~g~~LGfsi~Gg~e~ 391 (469)
. .+. ... .... . ....+|+.+..- ..
T Consensus 356 ----------~-------------~~~---~~~----------------------~~~~--~---~~~~~G~~l~~~-~~ 381 (448)
T 1ky9_A 356 ----------Q-------------SSQ---NQV----------------------DSSS--I---FNGIEGAEMSNK-GK 381 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------c-------------CCC---ccc----------------------cccc--c---cccccceEeecc-CC
Confidence 0 000 000 0000 0 001235554311 12
Q ss_pred CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 392 NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 392 ~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..|++|..|.++++|+++||++||+|++|||+++.+ ++++.++|+..
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~---~~~l~~~l~~~ 428 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKN---IAELRKVLDSK 428 (448)
T ss_dssp --------------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCC---HHHHHHHHHcC
Confidence 358899999999999999999999999999999987 44777777654
No 133
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.27 E-value=1.9e-11 Score=104.28 Aligned_cols=83 Identities=22% Similarity=0.261 Sum_probs=69.0
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.+++|.|.|.+ .+|||.+.+. .+++|..|.+++||+++||+.||+|++|||+++.++++++++++|+
T Consensus 23 ~~r~v~l~k~~---~~~G~~l~~~-----~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~----- 89 (109)
T 2vsv_A 23 MPRSIRFTAEE---GDLGFTLRGN-----APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLK----- 89 (109)
T ss_dssp SCEEEEECCGG---GCCCEEEESS-----SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH-----
T ss_pred CCEEEEEEeCC---CceeEEEeCC-----CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-----
Confidence 46899999975 8999999753 3789999999999999999999999999999999999999998865
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.+...
T Consensus 90 ----~~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 90 ----SFGEDEIEMKVVSLLD 105 (109)
T ss_dssp ----TTTTSCEEEEEESCC-
T ss_pred ----hCCCCeEEEEEEECCC
Confidence 1223458888877543
No 134
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=2.1e-11 Score=103.08 Aligned_cols=88 Identities=24% Similarity=0.488 Sum_probs=75.0
Q ss_pred CCeEEEEEecCCCCcceEEEEEE-----cCCCCC--CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHH
Q psy14977 202 LPVRTINMNRSQDANHGFGICVK-----GGANNP--GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEAL 273 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~-----gg~~~~--~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av 273 (469)
...++|+|.|.. .+|||+|. ++.+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++
T Consensus 8 ~~~~~v~l~k~~---~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 84 (108)
T 1q7x_A 8 GDIFEVELAKND---NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAV 84 (108)
T ss_dssp SSEEEEEEESSS---CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHH
T ss_pred CcEEEEEEEECC---CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 346889999975 78999999 766531 3689999999999999999 999999999999999999998988
Q ss_pred HHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 274 KMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 274 ~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..++ ..+..+.|+|.|...
T Consensus 85 ~~~~----------~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 85 ETLR----------NTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHH----------HTTSEEEEEEECCCC
T ss_pred HHHH----------cCCCeEEEEEEeCCc
Confidence 8865 457889999988654
No 135
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.27 E-value=2.6e-11 Score=104.21 Aligned_cols=85 Identities=32% Similarity=0.551 Sum_probs=72.7
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcC
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEG 280 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~ 280 (469)
..+++|+|.|.. .||||+|.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++..++
T Consensus 13 ~~~~~v~l~k~~---~glG~~l~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~--- 84 (119)
T 1tp5_A 13 REPRRIVIHRGS---TGLGFNIVGGED--GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK--- 84 (119)
T ss_dssp CSCEEEEEECTT---SCCCEEEEECGG--GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHH---
T ss_pred CccEEEEEEECC---CCccEEEecCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH---
Confidence 356899999975 689999998764 3589999999999999999 9999999999999999999888877743
Q ss_pred cccceEeecCcEEEEEEECCC
Q psy14977 281 YKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 281 ~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.+..
T Consensus 85 -------~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 85 -------NAGQTVTIIAQYKP 98 (119)
T ss_dssp -------TSCSEEEEEEEECH
T ss_pred -------cCCCeEEEEEEECC
Confidence 45778889888753
No 136
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=2.4e-11 Score=102.60 Aligned_cols=75 Identities=20% Similarity=0.295 Sum_probs=63.6
Q ss_pred cceEEEEEecCCCcccEEEeccccc--------CCcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY--------NLGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDT 437 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~--------~~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~ 437 (469)
..+.|+|.+. ..+|||.|.++.+. ..+++|..|.++++|+++ ||++||+|++|||+++.+++ |.+++.+
T Consensus 8 ~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~-~~~~~~~ 85 (107)
T 1uhp_A 8 KSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRAT-HDQAVEA 85 (107)
T ss_dssp EEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCC-HHHHHHH
T ss_pred EEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHH
Confidence 3455565433 46999999987642 469999999999999999 79999999999999999999 9999999
Q ss_pred HHhCCC
Q psy14977 438 VISFSH 443 (469)
Q Consensus 438 Lk~~g~ 443 (469)
++..++
T Consensus 86 ~~~~~~ 91 (107)
T 1uhp_A 86 FKTAKE 91 (107)
T ss_dssp HHHCCS
T ss_pred HHcCCC
Confidence 998655
No 137
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.27 E-value=1.7e-11 Score=98.97 Aligned_cols=62 Identities=18% Similarity=0.138 Sum_probs=57.7
Q ss_pred CcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 379 QSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 379 ~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..
T Consensus 11 ~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~l~~~ 73 (85)
T 2i04_A 11 RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHT-HAQVVKIFQSI 73 (85)
T ss_dssp TBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHTS
T ss_pred CCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 49999999877666789999999999999999 9999999999999999999 99999999876
No 138
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=4.5e-12 Score=105.99 Aligned_cols=86 Identities=26% Similarity=0.540 Sum_probs=72.7
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
...+++|.+.. .||||+|.++.+. ..+++|..|.+++||+++| |+.||+|++|||+++.++++.+++.+++
T Consensus 11 ~~~~v~l~~~~---~g~G~~~~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~---- 82 (103)
T 1wfv_A 11 DYFTVDMEKGA---KGFGFSIRGGREY-KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK---- 82 (103)
T ss_dssp CCEECCEECCT---TSSSBCCEEETTT-TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH----
T ss_pred eEEEEEEecCC---CcCCEEEeccccC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 45667787764 7899999987764 4589999999999999999 9999999999999999999999988844
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 83 ------~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 83 ------SGGRRVRLLLKRGTG 97 (103)
T ss_dssp ------HHCSEECEEEECTTC
T ss_pred ------cCCCeEEEEEEECCC
Confidence 347788899887643
No 139
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.27 E-value=1.8e-11 Score=101.48 Aligned_cols=75 Identities=27% Similarity=0.282 Sum_probs=65.7
Q ss_pred ceEEEEEecCCCcccEEEecccccC------CcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYN------LGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~------~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.+.|+|.+....+|||.+.++.+.. .+++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+|+.
T Consensus 6 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~-~~~~~~~l~~ 84 (98)
T 1ihj_A 6 IHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNST-EQAVIDLIKE 84 (98)
T ss_dssp EEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCC-HHHHHHHHHH
T ss_pred EEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHhc
Confidence 5677887656679999999887543 389999999999999999 9999999999999999999 9999999987
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 85 ~g~ 87 (98)
T 1ihj_A 85 ADF 87 (98)
T ss_dssp SCS
T ss_pred CCC
Confidence 554
No 140
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.26 E-value=2.4e-11 Score=119.09 Aligned_cols=87 Identities=30% Similarity=0.526 Sum_probs=76.3
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHH-cCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~-aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+++|+|.|.. +.||||+|.++.+. ..+++|..|.+++||++ +||++||+|++|||+++.++++.+++.+|+
T Consensus 77 ~~r~V~L~k~~--~~glGf~I~gg~d~-~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~---- 149 (263)
T 1z87_A 77 QRRRVTVRKAD--AGGLGISIKGGREN-KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALK---- 149 (263)
T ss_dssp SSEEECCCTTT--TCCCCCEEEEETTT-TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHH----
T ss_pred ccEEEEEEeCC--CCCEeEEEeeccCC-CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHh----
Confidence 46899999974 48999999998875 57899999999999999 689999999999999999999999999966
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..|.|+|.+...
T Consensus 150 ------~~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 150 ------KTGKEVVLEVKYMKE 164 (263)
T ss_dssp ------HCCSCCCEEEECCSS
T ss_pred ------cCCCeEEEEEEeCcc
Confidence 346778999988654
No 141
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=8.7e-12 Score=107.24 Aligned_cols=75 Identities=20% Similarity=0.269 Sum_probs=64.5
Q ss_pred ceEEEEEecC------CCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHH
Q psy14977 368 VRKVELNIEP------GQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDF 435 (469)
Q Consensus 368 ~~~V~L~~~~------g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav 435 (469)
.+.|+|.+.. +.+|||+|.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ |++++
T Consensus 13 ~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~-~~~~~ 91 (117)
T 1ujd_A 13 HARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKT-YEEVQ 91 (117)
T ss_dssp EEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCC-HHHHH
T ss_pred eEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCC-HHHHH
Confidence 4566665544 36899999988753 3489999999999999999 9999999999999999999 99999
Q ss_pred HHHHhCCC
Q psy14977 436 DTVISFSH 443 (469)
Q Consensus 436 ~~Lk~~g~ 443 (469)
.+|+..++
T Consensus 92 ~~l~~~~~ 99 (117)
T 1ujd_A 92 SIISQQSG 99 (117)
T ss_dssp HHHSCCSS
T ss_pred HHHhcCCC
Confidence 99998665
No 142
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.26 E-value=5e-11 Score=102.26 Aligned_cols=91 Identities=23% Similarity=0.349 Sum_probs=72.7
Q ss_pred cCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 198 DIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 198 ~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
.+.....++|+|.|.. ..+|||++.++.+. ..+++|..|.+++||+++| |+.||+|++|||+++.+.++.++..+|
T Consensus 19 ~~q~~~~~~V~l~~~~--~~~lG~~l~~~~~~-~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l 95 (114)
T 2gzv_A 19 YFQSMVPGKVTLQKDA--QNLIGISIGGGAQY-CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 95 (114)
T ss_dssp ---CCCCEEEEEECCT--TSCCSEEEEECCC---CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eeccCCCEEEEEEECC--CCcEeEEEEeCCCC-CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3445567999999986 35699999987764 4689999999999999999 999999999999999888999999886
Q ss_pred hhcCcccceEeecCcEEEEEEECCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
+ ..+..+.|+|....
T Consensus 96 ~----------~~~~~v~l~v~~~~ 110 (114)
T 2gzv_A 96 Q----------EVKGEVTIHYNKLQ 110 (114)
T ss_dssp H----------HCCSEEEEEEECCC
T ss_pred H----------cCCCeEEEEEEecc
Confidence 5 23456788876543
No 143
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.26 E-value=3.8e-11 Score=102.60 Aligned_cols=74 Identities=22% Similarity=0.208 Sum_probs=65.0
Q ss_pred CcceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCC-CCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 366 DTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGL-LVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 366 ~~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGL-r~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+..+.|+|.+....+|||.+.+. ..+++|..|.++++|+++|| ++||+|++|||+++.+++ +++++++|+..++
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~---~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~-~~~~~~~l~~~~~ 98 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNE---MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKD-VNEVFDLLSDMHG 98 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEEC---SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCC-HHHHHHHHHHCCE
T ss_pred CceEEEEEEeCCCCceeEEEEeC---CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 35677888777666999999865 36999999999999999996 999999999999999999 9999999987654
No 144
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.26 E-value=2.4e-11 Score=99.87 Aligned_cols=74 Identities=15% Similarity=0.119 Sum_probs=65.1
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+. +.+|||.+.++ +...+++|.+|.++++|+++| |++||+|++|||+++.+++ |++++++|+..+.
T Consensus 4 ~~r~v~l~k~-~~~lG~~i~~~-~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~~ 78 (93)
T 3o46_A 4 SVKIIRLVKN-REPLGATIKKD-EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKR-PEEIIQILAQSQG 78 (93)
T ss_dssp CCEEEEEEES-SSCCCEEEEEC-TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSC-HHHHHHHHHHCCE
T ss_pred cEEEEEEEeC-CCCccEEEEec-CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 4577888765 46999999876 345799999999999999999 9999999999999999999 9999999998764
No 145
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.26 E-value=1.7e-11 Score=103.91 Aligned_cols=74 Identities=24% Similarity=0.182 Sum_probs=64.6
Q ss_pred cceEEEEEecCCCcccEEEecccc----cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVE----YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e----~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.|.|.+. ..+|||.|.++.+ ...+++|..|.++++|+++| |++||+|++|||+++.+++ |++++++|+..
T Consensus 15 ~~~~v~l~k~-~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~ 92 (108)
T 2d92_A 15 EVKIVELVKD-CKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTS-LAEAVEILKAV 92 (108)
T ss_dssp SCEEEEEEEC-SSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCC-HHHHHHHHHHS
T ss_pred ceEEEEEEEC-CCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 3567777655 3699999998765 34689999999999999999 9999999999999999999 99999999986
Q ss_pred C
Q psy14977 442 S 442 (469)
Q Consensus 442 g 442 (469)
.
T Consensus 93 ~ 93 (108)
T 2d92_A 93 P 93 (108)
T ss_dssp C
T ss_pred C
Confidence 3
No 146
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=6.9e-12 Score=106.66 Aligned_cols=87 Identities=29% Similarity=0.504 Sum_probs=73.5
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC--------CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHH
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN--------PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALK 274 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~--------~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~ 274 (469)
.++|+|.|.. +.+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.
T Consensus 10 ~~~v~l~k~~--~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 10 LRELCIQKAP--GERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp SSCEEEECCT--TCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred cEEEEEEECC--CCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3668899875 47999999998742 14589999999999999999 9999999999999999999999999
Q ss_pred HhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 275 MCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 275 ~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+++ ..+..+.|+|.|...
T Consensus 88 ~l~----------~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 88 LLR----------SVGDTLTVLVCDGFE 105 (111)
T ss_dssp HHS----------SCSSEEEECCCCCCC
T ss_pred HHH----------cCCCeEEEEEEECCC
Confidence 954 356788888877543
No 147
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.26 E-value=3.8e-11 Score=100.55 Aligned_cols=86 Identities=33% Similarity=0.551 Sum_probs=69.5
Q ss_pred EEEEEecCC-CCcceEEEEEEcCCCC-----------CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHH
Q psy14977 205 RTINMNRSQ-DANHGFGICVKGGANN-----------PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEA 272 (469)
Q Consensus 205 ~~V~L~r~~-~~~~GlGf~i~gg~~~-----------~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~a 272 (469)
+.|++.+.. +...+|||++.++.+. ...+++|..|.+++||+++||++||+|++|||+++.+++++++
T Consensus 6 ~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 6 QRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 556676653 1234799999977652 2568999999999999999999999999999999999999999
Q ss_pred HHHhhhcCcccceEeecCcEEEEEEEC
Q psy14977 273 LKMCFFEGYKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 273 v~~ir~~~~~~~~Ilr~g~~v~l~V~~ 299 (469)
+..++ ...+..+.|+|.|
T Consensus 86 ~~~l~---------~~~g~~v~l~v~R 103 (104)
T 3sfj_A 86 RKRLT---------KRSEEVVRLLVTR 103 (104)
T ss_dssp HHHHT---------CTTCSEEEEEEEE
T ss_pred HHHHH---------hCCCCEEEEEEEc
Confidence 99865 2346788888865
No 148
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.25 E-value=1.5e-11 Score=101.38 Aligned_cols=73 Identities=23% Similarity=0.378 Sum_probs=63.7
Q ss_pred eEEEEEecCCCcccEEEecccc--------cCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVE--------YNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e--------~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..++|.+.++.+|||.|.++.+ ...|++|..|.++++|++ ||++||+|++|||+++.+++ +.+++.+++.
T Consensus 3 ~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 80 (95)
T 1mfg_A 3 MEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIE-HGQAVSLLKT 80 (95)
T ss_dssp EEEEEEEECSSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCB-HHHHHHHHHH
T ss_pred eEEEEEECCCCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCC-HHHHHHHhhc
Confidence 4556667777899999998764 345999999999999999 99999999999999999999 9999999987
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 81 ~~~ 83 (95)
T 1mfg_A 81 FQN 83 (95)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 149
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=9.2e-12 Score=107.19 Aligned_cols=74 Identities=11% Similarity=0.189 Sum_probs=65.6
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHc--CCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERA--GLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~a--GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.|+|.+.....|||.+.++.+...+++|..|.++++|+++ ||++||+|++|||+++.+++ |.+++++++..
T Consensus 15 ~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~-~~~~~~~~~~~ 90 (119)
T 2cs5_A 15 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHT-HDQVVLFIKAS 90 (119)
T ss_dssp CCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSC-HHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhc
Confidence 4566777655555899999998877778999999999999999 79999999999999999999 99999999876
No 150
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.25 E-value=8.9e-12 Score=107.05 Aligned_cols=88 Identities=30% Similarity=0.483 Sum_probs=74.1
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCC-----CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANN-----PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~-----~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
+..++|+|.|.+ +.+|||+|.++.+. ...+++|..|.+++||+ +||++||+|++|||+++.++++.+++..+
T Consensus 13 ~~~~~v~l~k~~--~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l 89 (117)
T 2csj_A 13 WEQYTVTLQKDS--KRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQL 89 (117)
T ss_dssp EEEEEEEEECCS--SSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred ceEEEEEEEECC--CCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 346789999874 47999999998763 14589999999999997 88999999999999999999999999886
Q ss_pred hhcCcccceEeecCcEEEEEEECCCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+ ..+..+.|+|.|...
T Consensus 90 ~----------~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 90 R----------KSGKIAAIVVKRPRK 105 (117)
T ss_dssp H----------HSCSEEEEEEEEEEE
T ss_pred h----------cCCCeEEEEEEECCc
Confidence 5 457889999887543
No 151
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.25 E-value=2.7e-11 Score=101.95 Aligned_cols=75 Identities=21% Similarity=0.349 Sum_probs=64.2
Q ss_pred cceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|.+.. .+|||++.++.+. ..+++|.+|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++.
T Consensus 3 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 80 (105)
T 2awx_A 3 KIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVT-HEEAVTALKN 80 (105)
T ss_dssp CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCB-HHHHHHHHHS
T ss_pred eEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHc
Confidence 34566665443 5999999988652 3599999999999999999 9999999999999999999 9999999998
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 81 ~~~ 83 (105)
T 2awx_A 81 TSD 83 (105)
T ss_dssp CCS
T ss_pred CCC
Confidence 765
No 152
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.25 E-value=1.6e-11 Score=104.57 Aligned_cols=88 Identities=20% Similarity=0.492 Sum_probs=73.5
Q ss_pred CCeEEEEEecCCCCcceEEEEEEc---CCCC--CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHH
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKG---GANN--PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKM 275 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~g---g~~~--~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ 275 (469)
+...+|+|.|.. .||||+|.+ +.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++..
T Consensus 3 ~~~~~v~l~k~~---~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 79 (113)
T 2g5m_B 3 MELFPVELEKDS---EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASV 79 (113)
T ss_dssp CEEEEEECCCCS---SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHH
T ss_pred eEEEEEEEEeCC---CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 446778888864 799999998 4332 14689999999999999999 99999999999999999999999888
Q ss_pred hhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 276 CFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 276 ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++ ..+..+.|+|.|...
T Consensus 80 ~~----------~~g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 80 LR----------NTKGRVRFMIGRERP 96 (113)
T ss_dssp HH----------HSCSSCEEEEEECCC
T ss_pred Hh----------cCCCeEEEEEEeCCC
Confidence 65 447788888888654
No 153
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.25 E-value=9.8e-12 Score=106.67 Aligned_cols=76 Identities=30% Similarity=0.323 Sum_probs=67.3
Q ss_pred cceEEEEEecCCCcccEEEeccccc---------CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY---------NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFD 436 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~---------~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~ 436 (469)
..+.|+|.+....+|||.|.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~-~~~~~~ 93 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNAS-HSEAVE 93 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCC-HHHHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHH
Confidence 4577888766667999999988753 3599999999999999999 9999999999999999999 999999
Q ss_pred HHHhCCC
Q psy14977 437 TVISFSH 443 (469)
Q Consensus 437 ~Lk~~g~ 443 (469)
+++..++
T Consensus 94 ~~~~~g~ 100 (117)
T 2ehr_A 94 AIKNAGN 100 (117)
T ss_dssp HHHTSCS
T ss_pred HHHcCCC
Confidence 9998765
No 154
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.25 E-value=6.9e-12 Score=109.41 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=66.0
Q ss_pred cceEEEEEecCCCcccEEEecccccC---CcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEec-CcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYN---LGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFL-ILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~---~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~-~~s~h~eav~~Lk~~ 441 (469)
..+.|+|.+....+|||.+.++.+.. .|++|..|.++++|+++| |++||+|++|||+++. +++ |++++++|+..
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~-~~~~~~~l~~~ 103 (128)
T 2db5_A 25 QIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNIS-HQQAIALLQQT 103 (128)
T ss_dssp EEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSC-HHHHHHHHHHC
T ss_pred ceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCC-HHHHHHHHHcC
Confidence 45677776555569999999877542 489999999999999999 9999999999999997 999 99999999987
Q ss_pred CC
Q psy14977 442 SH 443 (469)
Q Consensus 442 g~ 443 (469)
++
T Consensus 104 ~~ 105 (128)
T 2db5_A 104 TG 105 (128)
T ss_dssp CS
T ss_pred CC
Confidence 66
No 155
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.25 E-value=1.5e-11 Score=105.45 Aligned_cols=89 Identities=26% Similarity=0.534 Sum_probs=75.3
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCC--CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcC-CCCHHHHHHHhh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANN--PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFT-GISHEEALKMCF 277 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~--~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~-~~s~~~av~~ir 277 (469)
..+++|+|.|.. ..+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++. ++++.+++.+++
T Consensus 19 ~~~~~v~l~k~~--~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~ 96 (117)
T 2o2t_A 19 RHVEVFELLKPP--SGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQ 96 (117)
T ss_dssp SCEEEEEEECCS--SSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHH
T ss_pred CeEEEEEEEECC--CCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHH
Confidence 346889999974 47899999987642 13589999999999999999 9999999999999998 999999999865
Q ss_pred hcCcccceEeecCcEEEEEEECCCC
Q psy14977 278 FEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 278 ~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 97 ----------~~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 97 ----------KAKDTVQLVIARGSL 111 (117)
T ss_dssp ----------HCCSEEEEEEESSCC
T ss_pred ----------cCCCEEEEEEEeCCc
Confidence 357889999988654
No 156
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.25 E-value=2.1e-11 Score=101.07 Aligned_cols=74 Identities=23% Similarity=0.239 Sum_probs=62.7
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|. +...+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..++
T Consensus 6 ~~~v~l~-~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~l~~~g~ 80 (97)
T 1n7e_A 6 IYTVELK-RYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKP-LSEAIHLLQMAGE 80 (97)
T ss_dssp EEEEEEE-CTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCC-HHHHHHHHHTCCS
T ss_pred EEEEEEE-eCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4555552 23447999999877655799999999999999999 9999999999999999999 9999999986554
No 157
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.25 E-value=2.8e-11 Score=99.81 Aligned_cols=82 Identities=23% Similarity=0.492 Sum_probs=68.1
Q ss_pred EEEEEecCCCCcceEEEEEEcCCCC-------CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 205 RTINMNRSQDANHGFGICVKGGANN-------PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 205 ~~V~L~r~~~~~~GlGf~i~gg~~~-------~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
.+|++.++ .+|||+|.++.+. ...+++|..|.+++||++ ||++||+|++|||+++.++++.+++..++
T Consensus 5 ~~v~l~~~----~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 5 IRVRVEKD----PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEECS----SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEECCC----CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 45677765 4899999997641 246899999999999999 99999999999999999999998888854
Q ss_pred hcCcccceEeecCcEEEEEEECCC
Q psy14977 278 FEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 278 ~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 80 ----------~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 80 ----------TFQNTVELIIVREV 93 (95)
T ss_dssp ----------HCCSEEEEEEEEEC
T ss_pred ----------cCCCeEEEEEEeCC
Confidence 44778888887753
No 158
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.25 E-value=3.7e-11 Score=104.53 Aligned_cols=94 Identities=29% Similarity=0.484 Sum_probs=72.0
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCC--------CCCcEEEEEeCCCCHHHHcC-CCCCCEEEE
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANN--------PGVGVYISRVEEGSIAERAG-LRPGDSILQ 258 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~--------~~~gi~V~~V~pgspA~~aG-L~~GD~Il~ 258 (469)
|+++.|+. +++|++.|.. ..+|||++.+..+. ...+++|..|.+++||+++| |++||+|++
T Consensus 17 d~~s~~~~--------p~~v~l~k~~--~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ 86 (123)
T 2iwq_A 17 NLYFQSMQ--------PRRVELWREP--SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVE 86 (123)
T ss_dssp ------CC--------CEEEEECCCT--TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEE
T ss_pred cCCcccCC--------CEEEEEEecC--CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEE
Confidence 66666665 4889999874 36899999875432 12589999999999999999 999999999
Q ss_pred ECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCC
Q psy14977 259 VNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 259 VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
|||+++.++++.+++++|+ ..+..+.|+|.+..
T Consensus 87 Vng~~v~~~~~~~~~~~l~----------~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 87 VDGMDLRDASHEQAVEAIR----------KAGNPVVFMVQSII 119 (123)
T ss_dssp ETTEECTTCCHHHHHHHHH----------HCCSSEEEEEECCC
T ss_pred ECCEECCCCCHHHHHHHHH----------cCCCeEEEEEEECC
Confidence 9999999999999999965 33557888887754
No 159
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.25 E-value=2.8e-11 Score=100.95 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=65.0
Q ss_pred cceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|.+.. .+|||++.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++.
T Consensus 7 ~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 84 (101)
T 2jik_A 7 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLL-HQDAVDLFRN 84 (101)
T ss_dssp EEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCC-HHHHHHHHHT
T ss_pred ccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHh
Confidence 35677776543 6999999998763 3699999999999999999 9999999999999999999 9999999987
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 85 ~g~ 87 (101)
T 2jik_A 85 AGY 87 (101)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 160
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.24 E-value=3e-11 Score=102.35 Aligned_cols=76 Identities=18% Similarity=0.263 Sum_probs=65.3
Q ss_pred cceEEEEEecCCCcccEEEeccccc------------CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY------------NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKD 434 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~------------~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~ea 434 (469)
..+.|.|.++...+|||.+.++.+. ..|++|..|.++++|+++||++||+|++|||+++.+++ |+++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~-~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVG-HRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC-HHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHH
Confidence 3466777666667999999987652 23799999999999999999999999999999999999 9999
Q ss_pred HHHHHhCCC
Q psy14977 435 FDTVISFSH 443 (469)
Q Consensus 435 v~~Lk~~g~ 443 (469)
+++|+..++
T Consensus 86 ~~~l~~~~~ 94 (109)
T 1q3o_A 86 VNMIRQGGN 94 (109)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHhCCC
Confidence 999987654
No 161
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.24 E-value=5.5e-11 Score=98.57 Aligned_cols=85 Identities=21% Similarity=0.391 Sum_probs=70.6
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
++...+|.|.+.. ..||||.+... ..+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++
T Consensus 6 ~~~~~~v~l~~~~--~~glG~~~~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~-- 77 (96)
T 2qkv_A 6 SLEKFNVDLMKKA--GKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFK-- 77 (96)
T ss_dssp CCCCEEEEEECBT--TBCCCEEEEEC----SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH--
T ss_pred HCceEEEEEEeCC--CCCccEEEEeC----CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHh--
Confidence 3455778888754 47899998872 2489999999999999999 9999999999999999999988888854
Q ss_pred CcccceEeecCcEEEEEEECCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 78 --------~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 78 --------GANGKVSMEVTRPK 91 (96)
T ss_dssp --------TCSSEEEEEEECCC
T ss_pred --------cCCCcEEEEEEeCC
Confidence 34567999998854
No 162
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=2.9e-11 Score=104.05 Aligned_cols=76 Identities=24% Similarity=0.154 Sum_probs=66.7
Q ss_pred cceEEEEEecCCCcccEEEecccccC-CcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYN-LGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~-~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+..+.+|||.+.++.+.. .+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..++
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~-~~~~~~~l~~~g~ 92 (117)
T 1v62_A 15 GPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCS-LLEATKLLASISE 92 (117)
T ss_dssp SSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCC-HHHHHHHHHSCSS
T ss_pred CcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 46788887776679999999875533 349999999999999999 9999999999999999999 9999999997665
No 163
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.24 E-value=1.8e-11 Score=102.27 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=65.5
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
-++.|+|.+..+..|||.+....+ .+++|.+|.++|+|+++| |++||+|++|||+++.+++ +++++++|+..++
T Consensus 12 ~~~~v~l~K~~~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~-~~~~~~~l~~~~~ 86 (97)
T 2ejy_A 12 MVRLIQFEKVTEEPMGICLKLNEK--QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHS-VDQLQKAMKETKG 86 (97)
T ss_dssp -CEEEEEEECSSSCCSEEEEECTT--CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSC-SHHHHHHHHHCCE
T ss_pred ccEEEEEEeCCCCCeeEEEEeCCC--CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 468899988888899999985432 589999999999999999 9999999999999999988 9999999997643
No 164
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.24 E-value=3.5e-11 Score=98.20 Aligned_cols=74 Identities=22% Similarity=0.232 Sum_probs=63.5
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+.. .+|||.+.++.+ ..|++|..|.++++|+++||++||+|++|||+++.+++ |++++++|+..++
T Consensus 4 ~~r~v~l~k~~-~g~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~~ 77 (90)
T 2he4_A 4 RPRLCHLRKGP-QGYGFNLHSDKS-RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLR-HAEVVASIKARED 77 (90)
T ss_dssp CCEEEEEECBT-TBCCEEEEECSS-SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSC-HHHHHHHHTTSSS
T ss_pred CcEEEEEEECC-CCccEEEEccCC-CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 35777775433 599999987653 45899999999999999999999999999999999999 9999999988644
No 165
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=2.9e-11 Score=99.12 Aligned_cols=74 Identities=28% Similarity=0.251 Sum_probs=65.2
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+ ...+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++++..++
T Consensus 6 ~r~v~l~k-~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 80 (93)
T 2dkr_A 6 SGVVELPK-TDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQ-HEKAVELLKAAQG 80 (93)
T ss_dssp SCEEEEEC-CTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSC-HHHHHHHHHHCCS
T ss_pred CEEEEEEe-CCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 46777754 3469999999887667899999999999999997 9999999999999999998 9999999987654
No 166
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=4.7e-11 Score=103.55 Aligned_cols=72 Identities=18% Similarity=0.168 Sum_probs=62.3
Q ss_pred eEEEEEecCC-CcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 369 RKVELNIEPG-QSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 369 ~~V~L~~~~g-~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
+.+++.+.++ .+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..
T Consensus 19 ~~~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~ 92 (123)
T 1ueq_A 19 TFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHT-HADVVKLFQSV 92 (123)
T ss_dssp EEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSC-HHHHHHHHHTS
T ss_pred cEEEEEEEeCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 3334444444 49999999887767789999999999999999 9999999999999999999 99999999984
No 167
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.24 E-value=3.4e-11 Score=99.30 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=64.0
Q ss_pred cceEEEEEec-CCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIE-PGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~-~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+...|+|.+. .+.+|||.+.++.+ ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~~g~ 79 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTD-EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGT-PELAAQIIQASGE 79 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSS-SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHHCCS
T ss_pred EEEEEEEEECCCCCcccEEEEeccC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3466777654 34689999987653 4599999999999999999 9999999999999999999 9999999987765
No 168
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.24 E-value=2.9e-11 Score=98.88 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=62.7
Q ss_pred EEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 372 ELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 372 ~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.+....+|||.+.++.+...+++|..|.++|+|+++||++||+|++|||+++.++. +.+++.+++..++
T Consensus 6 ~v~~~~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 76 (91)
T 2pkt_A 6 QIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMT-HLEAQNRIKGCTD 76 (91)
T ss_dssp EEEEESSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC-HHHHHHHHHTCSS
T ss_pred EEEECCCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3344566799999998877667999999999999999999999999999999999999 9999999988544
No 169
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.24 E-value=5.1e-11 Score=100.40 Aligned_cols=88 Identities=30% Similarity=0.491 Sum_probs=73.2
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCC-----CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANN-----PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~-----~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
..+++|+|.|.+ +.||||+|.++.+. ...+++|..|.+++||+ +||++||+|++|||+++.++++.+++..+
T Consensus 6 ~~~~~v~l~k~~--~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (107)
T 2h2b_A 6 WEQHTVTLHRAP--GFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQL 82 (107)
T ss_dssp EEEEEEEEECBT--TTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ceeEEEEEEeCC--CCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHh
Confidence 346889999984 47999999987763 14589999999999999 99999999999999999999988777663
Q ss_pred hhcCcccceEeecCcEEEEEEECCCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+ +.+..+.|+|.|...
T Consensus 83 ~----------~~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 83 R----------KSGKNAKITIRRKKG 98 (107)
T ss_dssp H----------TCCSEEEEEEEEESC
T ss_pred h----------CCCCEEEEEEEECCC
Confidence 2 457889999887654
No 170
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.24 E-value=3.1e-11 Score=100.81 Aligned_cols=75 Identities=23% Similarity=0.314 Sum_probs=64.5
Q ss_pred cceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|.+. ..+|||.+.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++.
T Consensus 4 ~~~~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 81 (102)
T 2i1n_A 4 KYEEIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVV-HSRAVEALKE 81 (102)
T ss_dssp EEEEEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCC-HHHHHHHHHH
T ss_pred eEEEEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHc
Confidence 3466676543 45999999987652 4699999999999999999 9999999999999999999 9999999998
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 82 ~g~ 84 (102)
T 2i1n_A 82 AGP 84 (102)
T ss_dssp SCS
T ss_pred CCC
Confidence 755
No 171
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.24 E-value=8.4e-12 Score=109.46 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=64.9
Q ss_pred cceEEEEEecCCCcccEEEecccc---cCCcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVE---YNLGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e---~~~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.|+|.+. ..+|||.|.++.+ ...++||.+|.++++|+++ ||++||+|++|||+++.+++ |++++++|+..+
T Consensus 29 ~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~~ 106 (130)
T 1i16_A 29 TVCTVTLEKM-SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLT-RFEAWNIIKALP 106 (130)
T ss_dssp EEEEEEEETT-SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSC-HHHHHHHHHTSC
T ss_pred cEEEEEEEcC-CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCC
Confidence 4556666432 4599999999876 3568999999999999999 69999999999999999999 999999999875
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
.
T Consensus 107 ~ 107 (130)
T 1i16_A 107 D 107 (130)
T ss_dssp S
T ss_pred C
Confidence 4
No 172
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.24 E-value=6.1e-11 Score=103.43 Aligned_cols=90 Identities=19% Similarity=0.406 Sum_probs=74.5
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCC----CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHH
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANN----PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKM 275 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~----~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ 275 (469)
.+...+|.|.+.. ..+|||+|.++.+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++++
T Consensus 13 ~~~~~~v~l~~~~--~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 90 (129)
T 2dmz_A 13 LFETYNVELVRKD--GQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEV 90 (129)
T ss_dssp CEEEEEEEECCCT--TCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHH
T ss_pred CCcEEEEEEEeCC--CCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3446788887753 48999999986542 13589999999999999999 99999999999999999999999999
Q ss_pred hhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 276 CFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 276 ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
|+ ..+..+.|+|.|...
T Consensus 91 l~----------~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 91 LR----------NAGQVVHLTLVRRKT 107 (129)
T ss_dssp HH----------HCCSSEEEEEEEESS
T ss_pred HH----------cCCCeEEEEEEeCCc
Confidence 65 257788888887654
No 173
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=2.7e-11 Score=104.31 Aligned_cols=75 Identities=24% Similarity=0.318 Sum_probs=64.5
Q ss_pred cceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|.+. ..+|||+|.++.+. ..+++|..|.++|+|+++| |++||+|++|||+++.+++ +++++++|+.
T Consensus 24 ~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~ 101 (117)
T 2byg_A 24 TVVEIKLFKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVT-HEEAVAILKN 101 (117)
T ss_dssp EEEEEEEECB-TTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHT
T ss_pred ceEEEEEEeC-CCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHc
Confidence 4566777544 36999999987642 3589999999999999999 9999999999999999999 9999999997
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.+.
T Consensus 102 ~g~ 104 (117)
T 2byg_A 102 TSE 104 (117)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 174
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.24 E-value=2.3e-11 Score=98.83 Aligned_cols=84 Identities=21% Similarity=0.409 Sum_probs=67.5
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..++|+|.|.. .||||++.+..+ ..+++|..| +++||+ +||++||+|++|||+++.++++.+++..|+.
T Consensus 3 ~~~~v~l~k~~---~g~G~~~~~~~~--~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~---- 71 (88)
T 3bpu_A 3 ELITVHIVKGP---MGFGFTIADSPG--GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVE---- 71 (88)
T ss_dssp EEEEEEEECBT---TBSSCEEEECTT--SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHT----
T ss_pred cEEEEEEEcCC---CceeEEEEecCC--CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHh----
Confidence 35789999986 799999997654 358999887 999999 9999999999999999999999999988541
Q ss_pred cceEeecCcEEEEEEECCC
Q psy14977 283 EGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~ 301 (469)
...+..+.|+|.|..
T Consensus 72 ----~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 72 ----SPKGSEVTLLVQRQT 86 (88)
T ss_dssp ----SCTTCEEEEEEEEEC
T ss_pred ----CCCCCEEEEEEEeCC
Confidence 134678888887643
No 175
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.24 E-value=3.9e-11 Score=98.01 Aligned_cols=73 Identities=23% Similarity=0.260 Sum_probs=63.2
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+.. .+|||.+.++.+ ..+++|..|.++|+|+++||++||+|++|||+++.+++ +.+++++++....
T Consensus 4 ~r~v~l~r~~-~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~~ 76 (91)
T 1g9o_A 4 PRLCCLEKGP-NGYGFHLHGEKG-KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKET-HQQVVSRIRAALN 76 (91)
T ss_dssp CEEEEEECBT-TBCCEEEEECTT-CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC-HHHHHHHHHTCSS
T ss_pred cEEEEEEeCC-CcccEEEEecCC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4677775443 489999987653 35999999999999999999999999999999999999 9999999998654
No 176
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=1.9e-11 Score=105.44 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=64.7
Q ss_pred cceEEEEEecCCCcccEEEeccccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.|+|.+.. .+|||++.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +++++++|+..+
T Consensus 25 ~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~~ 102 (117)
T 2fne_A 25 QCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVT-HEEAVAILKRTK 102 (117)
T ss_dssp EEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHHCC
T ss_pred ccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCC
Confidence 45677775443 5999999987653 3589999999999999999 9999999999999999999 999999999765
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
.
T Consensus 103 ~ 103 (117)
T 2fne_A 103 G 103 (117)
T ss_dssp S
T ss_pred C
Confidence 4
No 177
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=6.9e-11 Score=98.80 Aligned_cols=88 Identities=31% Similarity=0.523 Sum_probs=70.2
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCC--------CCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHH
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNP--------GVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEA 272 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~--------~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~a 272 (469)
+.+++|.|.|.. ...|||.+.+..+.. ..+++|..|.+++||+++| |++||+|++|||+++.++++.++
T Consensus 3 ldp~~v~l~~~~--~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~ 80 (103)
T 2fcf_A 3 MQPRRVELWREP--SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQA 80 (103)
T ss_dssp CSCEEEEECCCC---CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred CCCEEEEEEeCC--CCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 456889998875 367999998865421 2489999999999999999 99999999999999999999999
Q ss_pred HHHhhhcCcccceEeecCcEEEEEEECCC
Q psy14977 273 LKMCFFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 273 v~~ir~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+|+ ..+..+.|+|.+..
T Consensus 81 ~~~l~----------~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 81 VEAIR----------KAGNPVVFMVQSII 99 (103)
T ss_dssp HHHHH----------TCCSSEEEEEECCC
T ss_pred HHHHH----------hCCCcEEEEEEECC
Confidence 99965 22457888887754
No 178
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=1.9e-11 Score=102.83 Aligned_cols=74 Identities=24% Similarity=0.318 Sum_probs=62.8
Q ss_pred eEEEEEecCC-CcccEEEeccccc------CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 369 RKVELNIEPG-QSLGLMIRGGVEY------NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 369 ~~V~L~~~~g-~~LGfsi~Gg~e~------~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
+.+++.+.++ .+|||.+.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ +++++.+|+.
T Consensus 7 ~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~l~~ 85 (105)
T 1wha_A 7 GRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEAR-HDHAVSLLTA 85 (105)
T ss_dssp EEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCC-HHHHHHHHTS
T ss_pred eeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHc
Confidence 3444444544 4899999988752 4699999999999999999 9999999999999999999 9999999987
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 86 ~g~ 88 (105)
T 1wha_A 86 ASP 88 (105)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 179
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=3.7e-11 Score=100.19 Aligned_cols=75 Identities=31% Similarity=0.413 Sum_probs=66.4
Q ss_pred CcceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 366 DTVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 366 ~~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
...+.|+|.+.....|||.+.+..+...|++|..|.++++|+++||++||+|++|||+++.+++ ++++++.++..
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~~~ 83 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-MGSAVKVLTSS 83 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-HHHHHHHHHSC
T ss_pred CeEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHhhcCC
Confidence 3567788866666689999998766667999999999999999999999999999999999999 99999999874
No 180
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.23 E-value=5.9e-11 Score=102.76 Aligned_cols=90 Identities=26% Similarity=0.365 Sum_probs=73.6
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCC---CCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhh
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGAN---NPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFF 278 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~---~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~ 278 (469)
..++|+|.|.+ ..+|||+|.++.. ....+++|..|.+++||+++| |++||+|++|||+++.++++++++++|+.
T Consensus 15 ~~~~v~l~k~~--~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 15 ETTEVVLTADP--VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp EEEEEEECCCS--SSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred eeEEEEEEeCC--CCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35778888874 5899999998732 124579999999999999999 99999999999999999999999999762
Q ss_pred cCcccceEeecCcEEEEEEECCCC
Q psy14977 279 EGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 279 ~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 93 --------~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 93 --------SSITSKVTLEIEFDVA 108 (122)
T ss_dssp --------HTTTTCEEEEEEEECC
T ss_pred --------CCCCCeEEEEEEECCc
Confidence 1226789999988654
No 181
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.22 E-value=4.9e-11 Score=97.95 Aligned_cols=74 Identities=22% Similarity=0.322 Sum_probs=63.5
Q ss_pred ceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.+.|+|.+. ..+|||.+.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++..
T Consensus 4 ~~~v~l~k~-~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~~ 81 (94)
T 2fe5_A 4 IMEVNLLKG-PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVR-HEEAVASLKNT 81 (94)
T ss_dssp EEEEEEECC-TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCB-HHHHHHHHHTC
T ss_pred EEEEEEEEC-CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcC
Confidence 466777543 45899999987652 3489999999999999999 9999999999999999999 99999999876
Q ss_pred CC
Q psy14977 442 SH 443 (469)
Q Consensus 442 g~ 443 (469)
++
T Consensus 82 ~~ 83 (94)
T 2fe5_A 82 SD 83 (94)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 182
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.22 E-value=4.7e-11 Score=101.86 Aligned_cols=75 Identities=23% Similarity=0.392 Sum_probs=65.1
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+.+.|+|.+. ..+|||.+.++.+...+++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 24 ~~~~v~l~~~-~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~g~ 99 (112)
T 2r4h_A 24 DFYTVELERG-AKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMK-HSRAIELIKNGGR 99 (112)
T ss_dssp CEEEEEEECB-TTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCC-HHHHHHHHHTTTT
T ss_pred ceEEEEEEcC-CCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4566676433 358999999887767899999999999999999 9999999999999999999 9999999987654
No 183
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=1.6e-11 Score=103.06 Aligned_cols=73 Identities=23% Similarity=0.135 Sum_probs=63.5
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.|+|.. ...+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..
T Consensus 9 ~~~~v~l~~-~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~-~~~~~~~l~~~ 82 (103)
T 1uep_A 9 KELDVHLRR-MESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKT-HRYVIDLMHHA 82 (103)
T ss_dssp EEECCEEES-SSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSC-HHHHHHHHHHH
T ss_pred eEEEEEEEe-CCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 345556643 3459999999887767899999999999999999 9999999999999999999 99999999876
No 184
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.22 E-value=4.2e-11 Score=102.85 Aligned_cols=82 Identities=15% Similarity=0.270 Sum_probs=69.6
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.++|+|.|+. .||||+|.++.. +.+|..|.+ +|+.+||++||+|++|||+++.+++|++++++||.
T Consensus 13 ~~~V~L~Kg~---~G~GFsI~~~~~----g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~----- 78 (113)
T 3soe_A 13 LVTIPLIKGP---KGFGFAIADSPT----GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQ----- 78 (113)
T ss_dssp EEEEEEECBT---TBSSEEEEEETT----EEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHH-----
T ss_pred EEEEEEEECC---CcccEEEeCCCC----CcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-----
Confidence 5789999985 799999976543 688999988 48888999999999999999999999999999762
Q ss_pred ceEeecCcEEEEEEECCCC
Q psy14977 284 GQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 79 ---~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 79 ---FPVGADVPLLILRGGP 94 (113)
T ss_dssp ---SCTTCEEEEEEEESSC
T ss_pred ---CCCCCEEEEEEEECCc
Confidence 2347899999998765
No 185
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.22 E-value=2.5e-11 Score=101.42 Aligned_cols=85 Identities=27% Similarity=0.311 Sum_probs=70.7
Q ss_pred CCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 200 DQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 200 ~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
..+....|+|.+.. .+|||.+.+. .+++|..|.+++||+++||+.||+|++|||+++.++++.+++++|+
T Consensus 12 ~~~~~~~v~l~~~~---~g~G~~~~~~-----~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~-- 81 (100)
T 1whd_A 12 ENGEKLQITIRRGK---DGFGFTICCD-----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIR-- 81 (100)
T ss_dssp CCCEEEEEEEECCS---SSSSCBCCCS-----SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHH--
T ss_pred cccceEEEEEECCC---CeeeEEEeCC-----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH--
Confidence 44556778888875 7899988764 3799999999999999999999999999999999999999998865
Q ss_pred CcccceEeecCcEEEEEEECCCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 82 --------~~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 82 --------SCPSEIILLVWRVSG 96 (100)
T ss_dssp --------HCSSEEEEEEEECCS
T ss_pred --------cCCCeEEEEEEECCC
Confidence 335568888887654
No 186
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=3.5e-11 Score=103.72 Aligned_cols=75 Identities=23% Similarity=0.340 Sum_probs=65.1
Q ss_pred cceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|.+.. .+|||.+.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ |.+++.+++.
T Consensus 17 ~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~-~~~~~~~~~~ 94 (120)
T 2eno_A 17 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLL-HQDAVDLFRN 94 (120)
T ss_dssp EEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCC-HHHHHHHHHH
T ss_pred ceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHc
Confidence 45666765443 6999999987763 5699999999999999999 9999999999999999999 9999999987
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 95 ~g~ 97 (120)
T 2eno_A 95 AGY 97 (120)
T ss_dssp HCS
T ss_pred CCC
Confidence 665
No 187
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=1.1e-11 Score=105.39 Aligned_cols=75 Identities=32% Similarity=0.477 Sum_probs=66.4
Q ss_pred ceEEEEEecCCCcccEEEecccc---------cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHH
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVE---------YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDT 437 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e---------~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~ 437 (469)
.+.|+|.+..+.+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+
T Consensus 10 ~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~-~~~~~~~ 88 (111)
T 1uju_A 10 LRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLT-HGEAVQL 88 (111)
T ss_dssp SSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSC-HHHHHHH
T ss_pred cEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHH
Confidence 46788876666799999998873 24589999999999999999 9999999999999999999 9999999
Q ss_pred HHhCCC
Q psy14977 438 VISFSH 443 (469)
Q Consensus 438 Lk~~g~ 443 (469)
|+..++
T Consensus 89 l~~~g~ 94 (111)
T 1uju_A 89 LRSVGD 94 (111)
T ss_dssp HSSCSS
T ss_pred HHcCCC
Confidence 988665
No 188
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=2.1e-11 Score=100.56 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=64.2
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+| +....|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 9 ~~~v~l--~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~~~~~g~ 81 (94)
T 2eeg_A 9 PHSVTL--RGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMT-HLEAQNRIKGCHD 81 (94)
T ss_dssp CEEEEE--CCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCC-HHHHHHHHHTCCS
T ss_pred eEEEEE--eCCCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 355555 555699999999887778999999999999999999999999999999999998 9999999987654
No 189
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.21 E-value=2.9e-11 Score=102.20 Aligned_cols=67 Identities=21% Similarity=0.310 Sum_probs=59.9
Q ss_pred cCCCcccEEEecccccC-----CcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 376 EPGQSLGLMIRGGVEYN-----LGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 376 ~~g~~LGfsi~Gg~e~~-----~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
....+|||+|.+|.+.. .+++|.+|.++|+|+++| |++||+|++|||+++.+++ +++++.+++..+.
T Consensus 10 ~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~~~ 82 (106)
T 4amh_A 10 RGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVT-HEEAVTALKNTSD 82 (106)
T ss_dssp --CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCC-HHHHHHHHHSCCS
T ss_pred CCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHhCCCC
Confidence 44569999999998743 389999999999999999 9999999999999999999 9999999998766
No 190
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.21 E-value=7.4e-11 Score=102.58 Aligned_cols=86 Identities=26% Similarity=0.414 Sum_probs=71.8
Q ss_pred CCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcC
Q psy14977 201 QLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEG 280 (469)
Q Consensus 201 ~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~ 280 (469)
.+.+++|+|.+.. .||||.+.++.+ ..+++|..|.+++||+++||+.||+|++|||+++.++++.++..+|+.
T Consensus 7 ~~~~r~v~l~~~~---~g~G~~l~~~~~--~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-- 79 (128)
T 2kjd_A 7 MLRPRLCTMKKGP---SGYGFNLHSDKS--KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRA-- 79 (128)
T ss_dssp TCCCEEEEEECCS---SSCCEEEEECSS--SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT--
T ss_pred CCCcEEEEEecCC---CcccEEEEecCC--CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--
Confidence 3456899999985 789999998765 348999999999999999999999999999999999999999998652
Q ss_pred cccceEeecCcEEEEEEECC
Q psy14977 281 YKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 281 ~~~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.|.
T Consensus 80 -------~~~~~~~l~v~R~ 92 (128)
T 2kjd_A 80 -------GGDETKLLVVDRE 92 (128)
T ss_dssp -------TCSEEEEEEECHH
T ss_pred -------CCCCEEEEEEEeC
Confidence 2345666777664
No 191
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.21 E-value=6.8e-11 Score=96.59 Aligned_cols=75 Identities=13% Similarity=0.173 Sum_probs=63.8
Q ss_pred cceEEEEEecCC-CcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPG-QSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g-~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+.+.|+|.+..+ .+|||.+.++.. ..|++|..|.++++|+++||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~g~ 81 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLL-EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFD-CCLVVPLIAESGN 81 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTT-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHTSTT
T ss_pred ceEEEEEEECCCCCCccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 456777766555 489999987653 36999999999999999999999999999999999999 9999999887654
No 192
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.21 E-value=4.3e-11 Score=104.68 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=62.2
Q ss_pred eEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..|+|.+ ...+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ |++++++|+...
T Consensus 20 ~~v~l~~-~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~-~~~~~~~l~~~~ 92 (129)
T 2kpk_A 20 IHTKLRK-SSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHT-HAQVVKIFQSIP 92 (129)
T ss_dssp EEEEEEE-CSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSC-HHHHHHHHHHSC
T ss_pred EEEEEEE-CCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCC
Confidence 4444433 2349999999877666689999999999999999 9999999999999999999 999999999873
No 193
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=8.6e-11 Score=100.75 Aligned_cols=83 Identities=27% Similarity=0.502 Sum_probs=71.3
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
++.|+|.+.. .+|||.+.++.+. +++|..|.+++||+++||++||+|++|||+++.++++.+++..+
T Consensus 20 ~~~v~l~~~~---~~lG~~~~~~~~~---gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~------- 86 (117)
T 1uit_A 20 PRHVKVQKGS---EPLGISIVSGEKG---GIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLII------- 86 (117)
T ss_dssp CEEEEEECSS---CCCCEEEEECTTS---CEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHT-------
T ss_pred CEEEEEEeCC---CCccEEEEccCCC---CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH-------
Confidence 5789999875 7899999987654 89999999999999999999999999999999999998877653
Q ss_pred ceEeecCcEEEEEEECCCC
Q psy14977 284 GQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~~ 302 (469)
.+.+..+.|+|.|...
T Consensus 87 ---~~~g~~v~l~v~r~~~ 102 (117)
T 1uit_A 87 ---GQQCDTITILAQYNPH 102 (117)
T ss_dssp ---TSCCSEEEEEECCCSC
T ss_pred ---HcCCCeEEEEEEECCc
Confidence 2457889999987654
No 194
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=1.4e-10 Score=95.45 Aligned_cols=76 Identities=28% Similarity=0.492 Sum_probs=63.1
Q ss_pred EEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccc
Q psy14977 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEG 284 (469)
Q Consensus 205 ~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~ 284 (469)
+.+++.+.. ...+|||.+.+ + +|..|.+++||+++||+.||+|++|||+++.++++.+++++|+
T Consensus 13 ~~~~i~~~~-~~~~lG~~~~~-------G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~------- 76 (90)
T 1y7n_A 13 TTVLIRRPD-LRYQLGFSVQN-------G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILS------- 76 (90)
T ss_dssp EEEEEEESS-TTSCCCEEEET-------T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHH-------
T ss_pred ceEEEEeCC-CccccCeEecC-------C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-------
Confidence 555555543 45789999854 3 8999999999999999999999999999999999999999965
Q ss_pred eEeecCcEEEEEEEC
Q psy14977 285 QMLKSNRELSMTVRS 299 (469)
Q Consensus 285 ~Ilr~g~~v~l~V~~ 299 (469)
+.+..+.|+|.+
T Consensus 77 ---~~g~~v~l~v~p 88 (90)
T 1y7n_A 77 ---NAVGEIHMKTMP 88 (90)
T ss_dssp ---HCCEEEEEEEEC
T ss_pred ---cCCCeEEEEEEE
Confidence 347788888764
No 195
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.20 E-value=6.6e-11 Score=97.64 Aligned_cols=75 Identities=24% Similarity=0.305 Sum_probs=64.1
Q ss_pred cceEEEEEecCCCcccEEEeccccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
+.+.|.|.+ ...+|||++.++.+. ..+++|..|.++|+|+++| |++||+|++|||+++.+++ +++++.+++..+
T Consensus 5 ~~~~v~l~k-~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~l~~~g 82 (96)
T 1d5g_A 5 DIFEVELAK-NDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGAT-HKQAVETLRNTG 82 (96)
T ss_dssp CEEEEEEEC-SSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCC-HHHHHHHHHSCC
T ss_pred CEEEEEEEe-CCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCC
Confidence 356667653 346999999987653 3599999999999999999 9999999999999999999 999999998765
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
+
T Consensus 83 ~ 83 (96)
T 1d5g_A 83 Q 83 (96)
T ss_dssp S
T ss_pred C
Confidence 4
No 196
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.20 E-value=4.6e-11 Score=100.55 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=63.1
Q ss_pred eEEEEEecCCCcccEEEecccc---cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVE---YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e---~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+.++++++...+|||++.++.+ ...+++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 11 ~~~~v~l~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~-~~~~~~~~~~~g~ 88 (106)
T 3axa_A 11 EIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLS-QERAAELMTRTSS 88 (106)
T ss_dssp CEEEEEEECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHTCCS
T ss_pred eEEEEEECCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3444555556799999987643 34589999999999999999 9999999999999999999 9999999988765
No 197
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.20 E-value=4.3e-11 Score=111.71 Aligned_cols=86 Identities=29% Similarity=0.651 Sum_probs=75.2
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..+.|+|.|.. ..||||++.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.+++.+|+
T Consensus 84 ~~~~v~l~k~~--~~~lG~~i~~~~~~-~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~----- 155 (192)
T 3k1r_A 84 KLKEVRLDRLH--PEGLGLSVRGGLEF-GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIR----- 155 (192)
T ss_dssp SCEEEEEETTS--TTCCCEEEEEEGGG-TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHT-----
T ss_pred ceEEEEEEeCC--CCceeEEEEccccc-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHc-----
Confidence 46889999984 37999999988654 56899999999999999999999999999999999999999999954
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
.+..+.|+|.+...
T Consensus 156 ------~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 156 ------TEKTVSIKVRHIGL 169 (192)
T ss_dssp ------SSSEEEEEEEECCE
T ss_pred ------CCCeEEEEEEECCc
Confidence 37889999988654
No 198
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=3.2e-11 Score=102.47 Aligned_cols=84 Identities=29% Similarity=0.565 Sum_probs=72.6
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.++.|+|.|.. .||||+|.++.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 15 ~~~~v~l~k~~---~glG~~l~~~~~--~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~---- 85 (113)
T 1um7_A 15 EPRKIILHKGS---TGLGFNIVGGED--GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK---- 85 (113)
T ss_dssp SEEEEEEECCS---SCSSBCCBCCST--TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH----
T ss_pred ceEEEEEEECC---CcccEEEEeccC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 46889999974 789999998765 3589999999999999999 9999999999999999999988888854
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.+..
T Consensus 86 ------~~~~~v~l~v~r~~ 99 (113)
T 1um7_A 86 ------RAGQSVTIVAQYRP 99 (113)
T ss_dssp ------SCCSEEEEEEECCH
T ss_pred ------hCCCcEEEEEEECc
Confidence 45778889888753
No 199
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.20 E-value=9.1e-11 Score=95.79 Aligned_cols=79 Identities=25% Similarity=0.417 Sum_probs=65.6
Q ss_pred EEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccc
Q psy14977 206 TINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEG 284 (469)
Q Consensus 206 ~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~ 284 (469)
.|+|.+.. ...+|||.+.+ +++|..|.+++||+++| |+.||+|++|||+++.++++++++++|+
T Consensus 3 ~v~l~~~~-~~~~~G~~~~~-------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~------- 67 (88)
T 3e17_A 3 GVLLMKSR-ANEEYGLRLGS-------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIE------- 67 (88)
T ss_dssp EEEEECBT-TBCCCCEEEEE-------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH-------
T ss_pred EEEEEeCC-CCCCCCEEEeC-------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-------
Confidence 35666654 34689998864 79999999999999999 9999999999999999999999999966
Q ss_pred eEeecCcEEEEEEECCCC
Q psy14977 285 QMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 285 ~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|++.+...
T Consensus 68 ---~~~~~v~L~v~~~~~ 82 (88)
T 3e17_A 68 ---KSRGKLQLVVLRDLE 82 (88)
T ss_dssp ---HTTTEEEEEECCC--
T ss_pred ---cCCCeEEEEEeCCCc
Confidence 456788888876543
No 200
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=1.5e-11 Score=103.09 Aligned_cols=73 Identities=15% Similarity=0.202 Sum_probs=64.2
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
...|+| ....+|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 6 ~~~v~l--~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~~~g~ 78 (103)
T 1wf7_A 6 SGSVSL--VGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMT-HLEAQNKIKACTG 78 (103)
T ss_dssp CEEEEE--ESSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCC-HHHHHHHHHHCSS
T ss_pred EEEEEE--eCCCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 344555 455799999999887777899999999999999999999999999999999998 9999999987765
No 201
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.20 E-value=4.1e-11 Score=100.38 Aligned_cols=83 Identities=23% Similarity=0.479 Sum_probs=69.6
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC-------CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN-------PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~-------~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
..+|++.|+ .+|||+|.++.+. ...+++|..|.+++||++ ||++||+|++|||+++.++++.+++..+
T Consensus 12 ~~~v~l~~~----~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 12 EIRVRVEKD----PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp CEEEEEECS----SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred EEEEEEccC----CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 356777775 4899999997641 246899999999999999 9999999999999999999999988885
Q ss_pred hhcCcccceEeecCcEEEEEEECCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
+ ..+..+.|+|.|..
T Consensus 87 ~----------~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 87 K----------TFQNTVELIIVREV 101 (103)
T ss_dssp H----------HCCSEEEEEEECCC
T ss_pred h----------cCCCeEEEEEEecC
Confidence 4 44788899988753
No 202
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.20 E-value=1e-10 Score=102.82 Aligned_cols=65 Identities=26% Similarity=0.312 Sum_probs=58.8
Q ss_pred CCCcccEEEeccccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 377 PGQSLGLMIRGGVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 377 ~g~~LGfsi~Gg~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
...+|||.+.++.+. ..++||..|.++++|+++| |++||+|++|||+++.+++ |++++++|+...
T Consensus 46 ~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~-~~~~~~~l~~~~ 114 (131)
T 1wfg_A 46 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGAT-FEEVYNIILESK 114 (131)
T ss_dssp SCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCC-HHHHHHHHHHTS
T ss_pred CCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhcC
Confidence 356999999987764 3489999999999999999 9999999999999999999 999999999864
No 203
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.20 E-value=7.4e-11 Score=97.70 Aligned_cols=73 Identities=22% Similarity=0.260 Sum_probs=62.3
Q ss_pred eEEEEEecCCCcccEEEecccccC-CcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEYN-LGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~~-~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+.|+|.+. ..+|||.+.++.+.. .+++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 6 ~~v~l~~~-~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 80 (98)
T 2opg_A 6 TTIEISKG-RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKAT-HDEAINVLRQTPQ 80 (98)
T ss_dssp EEEEEECB-TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHTCCS
T ss_pred EEEEEEEC-CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 45555432 358999999877543 599999999999999999 9999999999999999999 9999999987654
No 204
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.19 E-value=5.9e-11 Score=98.11 Aligned_cols=73 Identities=23% Similarity=0.310 Sum_probs=61.6
Q ss_pred eEEEEEecCCCcccEEEeccccc----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEY----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..|+|.+ ...+|||.+.++.+. ..+++|..|.++|+|+++| |++||+|++|||+++.+++ +++++++|+..++
T Consensus 5 ~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 82 (97)
T 2jil_A 5 VEVTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTT-HAEAMSILKQCGQ 82 (97)
T ss_dssp EEEEEEC-BTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCC-HHHHHHHHHHSCS
T ss_pred EEEEEEe-CCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4455532 235999999987542 4689999999999999999 9999999999999999999 9999999998544
No 205
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=96.24 Aligned_cols=84 Identities=19% Similarity=0.481 Sum_probs=69.4
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC---CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN---PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~---~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
..+|+|.+.. .+|||++.+..+. ...+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 5 ~~~v~l~~~~---~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~-- 79 (97)
T 2iwn_A 5 TFDVELTKNV---QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLR-- 79 (97)
T ss_dssp EEEEEEECBT---TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHH--
T ss_pred EEEEEEecCC---CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH--
Confidence 4567777764 7899999987431 14589999999999999999 9999999999999999999999888854
Q ss_pred CcccceEeecCcEEEEEEECC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.|.
T Consensus 80 --------~~~~~v~l~v~r~ 92 (97)
T 2iwn_A 80 --------HTGQTVLLTLMRR 92 (97)
T ss_dssp --------TCCSEEEEEEEEE
T ss_pred --------cCCCeEEEEEEeC
Confidence 3567888888764
No 206
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=5.4e-11 Score=102.29 Aligned_cols=94 Identities=20% Similarity=0.337 Sum_probs=74.1
Q ss_pred ccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHh
Q psy14977 197 PDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMC 276 (469)
Q Consensus 197 ~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~i 276 (469)
.+.....++.|+|.|......+|||+|.+..+....+++|..|.+++||+++||++||+|++|||+++.++++.++.++|
T Consensus 9 ~e~~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l 88 (114)
T 2d8i_A 9 IEICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFL 88 (114)
T ss_dssp CCSSCCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHH
T ss_pred eEeccCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 34445567899999986322379999887443212589999999999999999999999999999999999998988884
Q ss_pred hhcCcccceEeecCcEEEEEEECCCC
Q psy14977 277 FFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 277 r~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+ +..+.|+|.|...
T Consensus 89 ~------------~~~v~l~v~R~p~ 102 (114)
T 2d8i_A 89 S------------QPSLGLLVRTYPE 102 (114)
T ss_dssp T------------SSEEEEEEEECCC
T ss_pred h------------CCcEEEEEEECCC
Confidence 3 2488898888654
No 207
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.19 E-value=7.2e-11 Score=97.48 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=62.6
Q ss_pred ceEEEEEecCCCcccEEEeccc--ccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGV--EYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~--e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|.|.+.. .+|||.+.+.. +...|++|..|.++|+|+++||++||+|++|||+++.+++ +++++++|+..++
T Consensus 4 ~r~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 79 (96)
T 2v90_A 4 PRCLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLG-HEETVSRIQGQGS 79 (96)
T ss_dssp CEEEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCC-HHHHHHHHHTTTT
T ss_pred CEEEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4677775433 49999998733 3345899999999999999999999999999999999999 9999999988644
No 208
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=2e-11 Score=100.71 Aligned_cols=83 Identities=27% Similarity=0.402 Sum_probs=68.5
Q ss_pred EEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceE
Q psy14977 207 INMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQM 286 (469)
Q Consensus 207 V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~I 286 (469)
+++.+.. ..+|||++.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.++...|+
T Consensus 8 ~~~~~~~--~~~lG~~l~~g~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~--------- 75 (94)
T 1vb7_A 8 LTVDVAG--PAPWGFRISGGRDF-HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIR--------- 75 (94)
T ss_dssp EEEEECS--SSCCSBCCEEETTT-TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH---------
T ss_pred EEEEecC--CCCccEEEecccCC-CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHH---------
Confidence 4444442 37899999987764 56899999999999999999999999999999999999999998865
Q ss_pred eecCcEEEEEEECCCC
Q psy14977 287 LKSNRELSMTVRSPSI 302 (469)
Q Consensus 287 lr~g~~v~l~V~~~~~ 302 (469)
.....+.|+|.|...
T Consensus 76 -~~~~~v~l~v~R~g~ 90 (94)
T 1vb7_A 76 -QSASPLRLQLDRSSG 90 (94)
T ss_dssp -TCCSSEEEEEECCCC
T ss_pred -hCCCcEEEEEEECCc
Confidence 223778888888654
No 209
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.19 E-value=8.4e-11 Score=100.85 Aligned_cols=76 Identities=16% Similarity=0.137 Sum_probs=65.7
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+.....|||.+.++.+...+++|..|.++|+|+++| |++||+|++|||+++.+.+ +++++++|+..++
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~-~~~~~~~l~~~~~ 100 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKT-KVEVAKMIQEVKG 100 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHHCCS
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 45778887666668999999887666689999999999999999 9999999999999998888 9999999987654
No 210
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.18 E-value=5.8e-11 Score=97.67 Aligned_cols=73 Identities=26% Similarity=0.279 Sum_probs=61.8
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.+.|.+ ...+|||.+.++.+. .+++|..|.++|+|+++||++||+|++|||+++.+++ |++++++|+..+.
T Consensus 6 ~r~v~l~~-~~~~~G~~l~~~~~~-~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~~ 78 (95)
T 3r68_A 6 PRVVVIKK-GSNGYGFYLRAGPEQ-KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALD-HDGVVEMIRKGGD 78 (95)
T ss_dssp CEEEEEEC-BTTBCSCEEEEC--C-CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCC-HHHHHHHHHTTTT
T ss_pred cEEEEEec-CCCcccEEEEecCCC-CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 46667643 346999999876532 4899999999999999999999999999999999999 9999999998655
No 211
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.18 E-value=2.7e-11 Score=103.81 Aligned_cols=76 Identities=25% Similarity=0.319 Sum_probs=66.0
Q ss_pred cceEEEEEecCCCcccEEEecccc---cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEec-CcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVE---YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFL-ILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e---~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~-~~s~h~eav~~Lk~~ 441 (469)
..+.|+|.+....+|||.+.++.+ ...|++|..|.++|+|+++| |++||+|++|||+++. +++ +++++.+|+..
T Consensus 20 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~-~~~~~~~l~~~ 98 (117)
T 2o2t_A 20 HVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTIT-HQQAISILQKA 98 (117)
T ss_dssp CEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSC-HHHHHHHHHHC
T ss_pred eEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCC-HHHHHHHHHcC
Confidence 467788876656799999998763 23589999999999999999 9999999999999998 889 99999999986
Q ss_pred CC
Q psy14977 442 SH 443 (469)
Q Consensus 442 g~ 443 (469)
++
T Consensus 99 ~~ 100 (117)
T 2o2t_A 99 KD 100 (117)
T ss_dssp CS
T ss_pred CC
Confidence 65
No 212
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.18 E-value=2.1e-11 Score=119.60 Aligned_cols=76 Identities=22% Similarity=0.332 Sum_probs=68.4
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHH-cCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAER-AGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~-aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+..+.+|||.|.++.+...++||.+|.++++|++ +||++||+|++|||++|.+++ |++++.+|+..++
T Consensus 77 ~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t-~~e~v~~l~~~g~ 153 (263)
T 1z87_A 77 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSAT-HDEAVQALKKTGK 153 (263)
T ss_dssp SSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSC-HHHHHHHHHHCCS
T ss_pred ccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcC-HHHHHHHHhcCCC
Confidence 457777765556799999999987778999999999999999 579999999999999999999 9999999999876
No 213
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.18 E-value=6.3e-11 Score=101.03 Aligned_cols=83 Identities=29% Similarity=0.597 Sum_probs=69.5
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.++|++.+.. ..+|||+|.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++.+.+++.+++
T Consensus 16 ~~~v~~~~~~--~~~lG~~l~~~~~~-~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~------ 86 (114)
T 1x5n_A 16 EKKVFISLVG--SRGLGCSISSGPIQ-KPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLK------ 86 (114)
T ss_dssp SEEEEECCCS--SCCCCEEEEECCSS-SCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHH------
T ss_pred cEEEEEEEcC--CCceeEEEeecCCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh------
Confidence 4778887763 57999999987654 56899999999999999999999999999999999999888888844
Q ss_pred ceEeecCcEEEEEEECC
Q psy14977 284 GQMLKSNRELSMTVRSP 300 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~ 300 (469)
....+.|+|.|.
T Consensus 87 -----~~~~v~l~v~r~ 98 (114)
T 1x5n_A 87 -----SSRSLTISIVAA 98 (114)
T ss_dssp -----HCSSEEEEECSS
T ss_pred -----cCCeEEEEEEcC
Confidence 335677877665
No 214
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.18 E-value=7.4e-11 Score=99.54 Aligned_cols=74 Identities=23% Similarity=0.304 Sum_probs=61.5
Q ss_pred ceEEEEEecCCCcccEEEec---ccc---cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 368 VRKVELNIEPGQSLGLMIRG---GVE---YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~G---g~e---~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.+.|+|.+ ...+|||.+.+ +.+ ...+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++.
T Consensus 10 ~~~v~l~k-~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 87 (107)
T 1wf8_A 10 LFPVELEK-DEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVT-QNFAATVLRN 87 (107)
T ss_dssp EEEEEEEC-BTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCC-HHHHHHHHHH
T ss_pred EEEEEEEE-CCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHhc
Confidence 34455532 23599999998 333 23589999999999999999 9999999999999999999 9999999998
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 88 ~~~ 90 (107)
T 1wf8_A 88 TKG 90 (107)
T ss_dssp CCS
T ss_pred CCC
Confidence 765
No 215
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.18 E-value=1.9e-10 Score=102.17 Aligned_cols=91 Identities=33% Similarity=0.542 Sum_probs=73.0
Q ss_pred CeEEEEEecCC-CCcceEEEEEEcCCCC-----------CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHH
Q psy14977 203 PVRTINMNRSQ-DANHGFGICVKGGANN-----------PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHE 270 (469)
Q Consensus 203 ~~~~V~L~r~~-~~~~GlGf~i~gg~~~-----------~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~ 270 (469)
..++|.|.+.. ....+|||.+.++.+. ...+++|..|.+++||+++||++||+|++|||+++.++++.
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~ 102 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHD 102 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHH
Confidence 35778888853 1224799999887652 14699999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 271 EALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 271 ~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
+++.+|+ ...+..+.|+|.|...
T Consensus 103 ~~~~~l~---------~~~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 103 QARKRLT---------KRSEEVVRLLVTRQSL 125 (139)
T ss_dssp HHHHHHC---------CTTCSEEEEEEEECC-
T ss_pred HHHHHHH---------hCCCCEEEEEEEECCE
Confidence 9999965 2346788888887654
No 216
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.18 E-value=8.6e-11 Score=99.52 Aligned_cols=83 Identities=20% Similarity=0.373 Sum_probs=68.9
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..+|.|.|.. ..||||.+.+. ..+++|..|.+++||+++| |++||+|++|||+++.++++.++..+++
T Consensus 3 ~~~v~L~k~~--~~glG~~i~~~----~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~----- 71 (106)
T 2la8_A 3 KFNVDLMKKA--GKELGLSLSPN----EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFK----- 71 (106)
T ss_dssp EEEEEECCBS--SSTTCCEEEEC----SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHH-----
T ss_pred EEEEEEEeCC--CCccCEEEEeC----CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHh-----
Confidence 4678888664 47899998872 3489999999999999999 9999999999999999999998888854
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 72 -----~~~~~v~l~v~R~~~ 86 (106)
T 2la8_A 72 -----GANGKVSMEVTRPKP 86 (106)
T ss_dssp -----SCBSCEEEEEEECCS
T ss_pred -----CCCCeEEEEEEeCCC
Confidence 334678999888643
No 217
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.79 E-value=2.4e-12 Score=110.24 Aligned_cols=85 Identities=32% Similarity=0.584 Sum_probs=69.5
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHH-cCCCCCCEEEEECCEEcCC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAER-AGLRPGDSILQVNGIPFTG 266 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~-aGL~~GD~Il~VNG~~v~~ 266 (469)
||+..++..... ..+++|.|.|.. ..+|||++.++.+. ..+++|..|.+++||++ +||++||+|++|||+++.+
T Consensus 14 ~~~~~~me~~~~--~~~~~v~l~k~~--~~glG~~l~~g~~~-~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~ 88 (112)
T 2lob_A 14 HIEGRHMENLYF--QGIRKVLLLKED--HEGLGISITGGKEH-GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRD 88 (112)
Confidence 566666554322 245678888874 47999999988765 56899999999999999 8999999999999999999
Q ss_pred CCHHHHHHHhh
Q psy14977 267 ISHEEALKMCF 277 (469)
Q Consensus 267 ~s~~~av~~ir 277 (469)
.++.+++.+|+
T Consensus 89 ~~~~~~~~~l~ 99 (112)
T 2lob_A 89 TKHKEAVTILS 99 (112)
Confidence 88999988854
No 218
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=8.9e-11 Score=98.37 Aligned_cols=74 Identities=26% Similarity=0.267 Sum_probs=63.3
Q ss_pred ceEEEEEecCCCcccEEEeccccc--CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEY--NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~--~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|... ..+|||.+.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++++++..++
T Consensus 12 ~~~v~l~~~-~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~~g~ 88 (104)
T 2djt_A 12 HFSVELVRG-YAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLT-HAQAVERIRAGGP 88 (104)
T ss_dssp CEEEEEECC-SSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCC-HHHHHHHHHHTCS
T ss_pred eEEEEEEeC-CCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 456666433 25999999987654 4689999999999999999 9999999999999999999 9999999988655
No 219
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.1e-10 Score=98.95 Aligned_cols=74 Identities=23% Similarity=0.192 Sum_probs=62.6
Q ss_pred ceEEEEEecCCCcccEEEeccccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+. ..+|||.+.++.+. ..|++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 9 ~~~v~l~~~-~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 86 (110)
T 1um1_A 9 VFTVELERG-PSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLG-YLRAVDLIRHGGK 86 (110)
T ss_dssp EEEEEEECC-TTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCC-HHHHHHHHHTCCS
T ss_pred EEEEEEEEC-CCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 455555432 25999999987653 3589999999999999999 9999999999999999999 9999999998765
No 220
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.17 E-value=7.4e-11 Score=99.05 Aligned_cols=76 Identities=16% Similarity=0.103 Sum_probs=64.5
Q ss_pred cceEEEEEecCCCcccEEEeccc-------ccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGV-------EYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVI 439 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~-------e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk 439 (469)
..+.+.|.+....+|||.+.+.. +...+++|..|.++++|+++||++||+|++|||+++.+++ +++++++|+
T Consensus 15 ~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~-~~~~~~~l~ 93 (104)
T 2z17_A 15 QRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFT-YKQVVDLIR 93 (104)
T ss_dssp CCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCC-HHHHHHHHH
T ss_pred cceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCC-HHHHHHHHH
Confidence 34667776665679999999732 2346999999999999999999999999999999999998 999999998
Q ss_pred hCCC
Q psy14977 440 SFSH 443 (469)
Q Consensus 440 ~~g~ 443 (469)
..+.
T Consensus 94 ~~~~ 97 (104)
T 2z17_A 94 SSGN 97 (104)
T ss_dssp HTTT
T ss_pred hCCC
Confidence 8643
No 221
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.17 E-value=1.3e-10 Score=97.93 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=62.8
Q ss_pred cceEEEEEecCCCcccEEEeccccc------------CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY------------NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKD 434 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~------------~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~ea 434 (469)
..+.|.|.+.. .+|||++.++.+. ..++||..|.++|+|+++||++||+|++|||+++.+++ ++++
T Consensus 6 ~~r~v~l~k~~-~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~ 83 (107)
T 3qe1_A 6 SPRVVRIVKSE-SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGAT-HKQV 83 (107)
T ss_dssp CCEEEEEECBT-TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHH
T ss_pred CcEEEEEEECC-CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHH
Confidence 34677776543 3899999987432 23567999999999999999999999999999999999 9999
Q ss_pred HHHHHhCCC
Q psy14977 435 FDTVISFSH 443 (469)
Q Consensus 435 v~~Lk~~g~ 443 (469)
+++|+..++
T Consensus 84 ~~~l~~~g~ 92 (107)
T 3qe1_A 84 VDLIRAGEK 92 (107)
T ss_dssp HHHHHHCSS
T ss_pred HHHHHcCCC
Confidence 999998655
No 222
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.16 E-value=1.5e-10 Score=96.76 Aligned_cols=88 Identities=19% Similarity=0.335 Sum_probs=70.7
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC-CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN-PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~-~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+.|+|.|.++ .+|||+|...... ...+++|..|.+++||++++ |++||+|++|||+++.+.++++++++|+.
T Consensus 10 ~~~v~l~k~~g--~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~--- 84 (101)
T 2yt7_A 10 CREVHLEKRRG--EGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRE--- 84 (101)
T ss_dssp CEEEEEECCTT--CCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHH---
T ss_pred eEEEEEEeCCC--CccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh---
Confidence 48899998753 6899999753221 12369999999999999954 99999999999999999999999999762
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
.+.+..+.|+|.|..
T Consensus 85 -----~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 85 -----TKSQTSVTLSIVHCP 99 (101)
T ss_dssp -----TTTSSEEEEEECCCC
T ss_pred -----CCCCCeEEEEEEeCC
Confidence 125788999987754
No 223
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.16 E-value=5.7e-11 Score=103.75 Aligned_cols=72 Identities=21% Similarity=0.310 Sum_probs=61.8
Q ss_pred eEEEEEec--CCCcccEEEeccccc----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 369 RKVELNIE--PGQSLGLMIRGGVEY----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 369 ~~V~L~~~--~g~~LGfsi~Gg~e~----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
+.+++.+. ...+|||.|.++.+. ..++||..|.++++|+++| |++||+|++|||+++.+++ |++++++|+..
T Consensus 25 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~ 103 (127)
T 1wg6_A 25 LTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKS-NHEAMETLRRS 103 (127)
T ss_dssp EEEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSC-HHHHHHHHHHH
T ss_pred eEEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHHh
Confidence 44555554 345999999987643 3589999999999999999 9999999999999999999 99999999975
No 224
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.16 E-value=9.1e-11 Score=107.84 Aligned_cols=74 Identities=24% Similarity=0.360 Sum_probs=61.5
Q ss_pred ceEEEEEecCCCcccEEEec---cccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 368 VRKVELNIEPGQSLGLMIRG---GVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~G---g~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
...|+|.+. ..+|||+|.+ +.+. ..++||..|.++++|+++| |++||+|++|||++|.+++ |++++++|+.
T Consensus 81 ~~~v~l~k~-~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~-~~~~~~~l~~ 158 (170)
T 3egg_C 81 LFPVELEKD-SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVT-QSFAASVLRN 158 (170)
T ss_dssp EEEEEEECB-TTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBC-HHHHHHHHHH
T ss_pred EEEEEEEeC-CCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHc
Confidence 344444332 2599999998 3332 3589999999999999999 9999999999999999999 9999999998
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.+.
T Consensus 159 ~g~ 161 (170)
T 3egg_C 159 TKG 161 (170)
T ss_dssp CCS
T ss_pred CCC
Confidence 765
No 225
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.16 E-value=1.9e-10 Score=100.10 Aligned_cols=83 Identities=29% Similarity=0.547 Sum_probs=67.9
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.+.+.+.+. .+|||.+.++.+. +++|..|.+++||+++||++||+|++|||+++.++++++++..|+.
T Consensus 30 ~~~~~~~~~----~~lG~~l~~~~~~---gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~----- 97 (124)
T 3tsv_A 30 MKLVKFRKG----DSVGLRLAGGNDV---GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLD----- 97 (124)
T ss_dssp CEEEEEECS----SCCCEEEEECTTS---CEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHH-----
T ss_pred eEEEEcCCC----CceeEEEecCCCC---CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-----
Confidence 344444443 6899999987654 8999999999999999999999999999999999999998887541
Q ss_pred ceEeecCcEEEEEEECCC
Q psy14977 284 GQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~ 301 (469)
...+..+.|+|.+..
T Consensus 98 ---~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 98 ---LPKGEEVTILAQKKK 112 (124)
T ss_dssp ---SCTTCEEEEEEEECH
T ss_pred ---cCCCCEEEEEEEECC
Confidence 245788999988753
No 226
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.16 E-value=8.1e-11 Score=100.52 Aligned_cols=86 Identities=26% Similarity=0.449 Sum_probs=71.8
Q ss_pred CCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 202 LPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 202 ~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
+.++++.|.+.. ..+|||.+....+ ..+++|..|.+++||+++||+.||+|++|||+++.++++.+++..|+
T Consensus 12 ldp~~~~l~~~~--~~~~G~~l~~~~~--~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~---- 83 (114)
T 2edz_A 12 FNPRECKLSKQE--GQNYGFFLRIEKD--TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR---- 83 (114)
T ss_dssp CCCEEEEEECCT--TCCCSCEEECCTT--CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHH----
T ss_pred CCCEEEEEeCCC--CCcccEEEEEecC--CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 356888888875 3677887776544 35899999999999999999999999999999999999999999865
Q ss_pred ccceEeecCcEEEEEEECCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 84 ------~~g~~v~l~v~R~~ 97 (114)
T 2edz_A 84 ------KSGNSVTLLVLDGD 97 (114)
T ss_dssp ------HTCSEEEEEEECHH
T ss_pred ------cCCCEEEEEEEECC
Confidence 34788999988754
No 227
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.16 E-value=4.7e-11 Score=102.50 Aligned_cols=75 Identities=15% Similarity=0.133 Sum_probs=64.1
Q ss_pred cceEEEEEecCCCcccEEEeccccc------CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY------NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~------~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|.+....+|||.|.++.+. ..|++|..|.++++|+ +||++||+|++|||+++.+++ |.+++.+++.
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~-~~~~~~~l~~ 91 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVL-HSFAVQQLRK 91 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCC-HHHHHHHHHH
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcC-HHHHHHHHhc
Confidence 3456666655557999999998752 4589999999999997 779999999999999999999 9999999998
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 92 ~~~ 94 (117)
T 2csj_A 92 SGK 94 (117)
T ss_dssp SCS
T ss_pred CCC
Confidence 766
No 228
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.16 E-value=2.3e-11 Score=101.89 Aligned_cols=73 Identities=23% Similarity=0.392 Sum_probs=63.1
Q ss_pred eEEEEEecCCCcccEEEecccc--------cCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVE--------YNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e--------~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
+.++|.+.++.+|||.+.++.+ ...|++|..|.++|+|++ ||++||+|++|||+++.+++ +.+++.+++.
T Consensus 11 ~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 88 (103)
T 1n7t_A 11 QEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIE-HGQAVSLLKT 88 (103)
T ss_dssp CCEEEEEECSSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCC-HHHHHHHHHH
T ss_pred EEEEEEEccCCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCC-HHHHHHHhhc
Confidence 3445556677799999998764 346999999999999999 99999999999999999999 9999999987
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 89 ~g~ 91 (103)
T 1n7t_A 89 FQN 91 (103)
T ss_dssp CCS
T ss_pred CCC
Confidence 655
No 229
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=6.6e-11 Score=97.26 Aligned_cols=80 Identities=21% Similarity=0.395 Sum_probs=66.6
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
+|+|.|.|.. ..+|||++.+. ..+++|..|.+++||+++| |++||+|++|||+++ +.+++++.++|+
T Consensus 7 ~r~v~l~k~~--~~~lG~~i~~~----~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~----- 74 (91)
T 2e7k_A 7 GRMVGIRKTA--GEHLGVTFRVE----GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLR----- 74 (91)
T ss_dssp SCBCCBCCCT--TCCCCEEEEES----SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHH-----
T ss_pred cEEEEEEECC--CCcEeEEEEec----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHH-----
Confidence 4678887764 47899999883 2489999999999999998 999999999999999 889999999966
Q ss_pred cceEeecCcEEEEEEECC
Q psy14977 283 EGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~ 300 (469)
..+..+.|+|.+.
T Consensus 75 -----~~~~~v~l~v~~~ 87 (91)
T 2e7k_A 75 -----NASGSVILKILSG 87 (91)
T ss_dssp -----TCCSSBCEEEECC
T ss_pred -----cCCCeEEEEEEEC
Confidence 2355677777764
No 230
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.16 E-value=8.4e-11 Score=98.87 Aligned_cols=74 Identities=24% Similarity=0.222 Sum_probs=65.0
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|.|.+..+..|||.+....+ ..|++|..|.++|+|+++||++||+|++|||+++.+++ |++++++|+..++
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 75 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEE-HAQVVELVRKSGN 75 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTT-CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSC-HHHHHHHHHHTTT
T ss_pred CEEEEEEeCCCCeeCEEEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 36778877777799999986643 35899999999999999999999999999999999999 9999999987665
No 231
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.16 E-value=1.4e-10 Score=97.03 Aligned_cols=74 Identities=22% Similarity=0.234 Sum_probs=63.8
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.+. ..+|||.+.++.+ ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 11 ~~~~v~l~k~-~~glG~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 85 (104)
T 3i4w_A 11 EPRRIVIHRG-STGLGFNIVGGEX-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNAS-HEQAAIALKNAGQ 85 (104)
T ss_dssp SCEEEEEECB-TTBTSEEEEECC--CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCC-HHHHHHHHHTSCS
T ss_pred ccEEEEEEeC-CCccCEEEECCCC-CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3567777544 4599999997764 3599999999999999999 9999999999999999999 9999999998765
No 232
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.16 E-value=8.3e-11 Score=102.75 Aligned_cols=76 Identities=32% Similarity=0.291 Sum_probs=65.3
Q ss_pred cceEEEEEecC-CCcccEEEeccccc---------CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHH
Q psy14977 367 TVRKVELNIEP-GQSLGLMIRGGVEY---------NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDF 435 (469)
Q Consensus 367 ~~~~V~L~~~~-g~~LGfsi~Gg~e~---------~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav 435 (469)
..+.|.|.+.. +.+|||.+.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++ |++++
T Consensus 29 ~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~-~~~~~ 107 (128)
T 1nf3_C 29 THRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKS-LDQVT 107 (128)
T ss_dssp TCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCC-HHHHH
T ss_pred ccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHH
Confidence 45778886554 46999999987641 2489999999999999999 9999999999999999999 99999
Q ss_pred HHHHhCCC
Q psy14977 436 DTVISFSH 443 (469)
Q Consensus 436 ~~Lk~~g~ 443 (469)
++|+..+.
T Consensus 108 ~~l~~~~~ 115 (128)
T 1nf3_C 108 DMMIANSR 115 (128)
T ss_dssp HHHHHTTT
T ss_pred HHHHcCCC
Confidence 99987655
No 233
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=5.5e-11 Score=99.20 Aligned_cols=75 Identities=31% Similarity=0.430 Sum_probs=63.2
Q ss_pred cceEEEEEecC-CCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEP-GQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~-g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
+.+.+.|.+.. ..+|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.++. +.+++..++...
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~~~~ 83 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVT-HAEAVKALKGSK 83 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCC-HHHHHHHSSSSS
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcC-HHHHHHhhcCCC
Confidence 45666665433 3599999998876667999999999999999999999999999999999999 788888876653
No 234
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.15 E-value=5.2e-11 Score=100.90 Aligned_cols=72 Identities=15% Similarity=0.109 Sum_probs=62.8
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+|+|.++...+|||.+.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +++++.+++..++
T Consensus 3 ~~~v~L~k~~~~glG~~i~~~---~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~-~~~~~~~~~~~~~ 75 (106)
T 2la8_A 3 KFNVDLMKKAGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLP-FQVCYALFKGANG 75 (106)
T ss_dssp EEEEEECCBSSSTTCCEEEEC---SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSC-HHHHHHHHHSCBS
T ss_pred EEEEEEEeCCCCccCEEEEeC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHhCCCC
Confidence 356677666667999998762 3689999999999999999 9999999999999999999 9999999988765
No 235
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=7.8e-11 Score=96.80 Aligned_cols=72 Identities=15% Similarity=0.096 Sum_probs=62.1
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.++.+..|||.+.+. ..+++|.+|.++++|+++| |++||+|++|||+++ +.+ +++++++|+..++
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~~---~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~-~~~~~~~l~~~~~ 78 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRVE---GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSD-PRALQELLRNASG 78 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEES---SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTC-HHHHHHHHHTCCS
T ss_pred CcEEEEEEECCCCcEeEEEEec---CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCC-HHHHHHHHHcCCC
Confidence 3466777666667999999863 3699999999999999998 999999999999999 888 9999999997654
No 236
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.15 E-value=1.3e-10 Score=94.64 Aligned_cols=85 Identities=26% Similarity=0.335 Sum_probs=67.7
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
...+.|.+.++...+|||.+.... .+++|..|.+++||+++||+.||+|++|||+++.+.++.++..+|+.
T Consensus 4 ~~~~~~~~~~~~~~~lG~~~~~~~----~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~----- 74 (90)
T 2eaq_A 4 DMRISINQTPGKSLDFGFTIKWDI----PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAK----- 74 (90)
T ss_dssp EEEEEEECCTTCSSCCSEEEEEET----TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHH-----
T ss_pred ceEEEEEecCCCCCcccEEEEecC----CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHh-----
Confidence 456777877655568999887533 38999999999999999999999999999999977788888887541
Q ss_pred ceEeecCcEEEEEEECC
Q psy14977 284 GQMLKSNRELSMTVRSP 300 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~ 300 (469)
.+.+..+.|+|.|.
T Consensus 75 ---~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 75 ---AQETGHLVMDVRRY 88 (90)
T ss_dssp ---HHHHTEEEEEEEEE
T ss_pred ---cCCCCEEEEEEEeC
Confidence 13467888888764
No 237
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=5.7e-11 Score=99.20 Aligned_cols=75 Identities=9% Similarity=0.126 Sum_probs=65.4
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+.+.+.+.+....+|||.+.++.+...+++|..|.++++|+++ ||++||+|++|||+++.++ +++++++++..++
T Consensus 9 ~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~--~~~~~~~~~~~~~ 84 (100)
T 2edp_A 9 SFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS--RQEALILIKGSFR 84 (100)
T ss_dssp CCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC--SHHHHHHHHTCCS
T ss_pred CcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch--HHHHHHHHHhCCC
Confidence 4567778777667999999988776678999999999999999 7999999999999999984 6789999987654
No 238
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.15 E-value=2.7e-11 Score=99.87 Aligned_cols=73 Identities=16% Similarity=0.203 Sum_probs=64.7
Q ss_pred eEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.+.++...+|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.+++ |++++++|+...
T Consensus 6 ~~~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~ 78 (94)
T 1vb7_A 6 SGLTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENML-HAEAQSKIRQSA 78 (94)
T ss_dssp CCEEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHTCC
T ss_pred EEEEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCC
Confidence 3456666666799999998877667999999999999999999999999999999999999 999999998764
No 239
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=1.4e-10 Score=96.98 Aligned_cols=75 Identities=32% Similarity=0.362 Sum_probs=62.2
Q ss_pred ceEEEEEecCCCcccEEEeccccc---------CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHH
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEY---------NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDT 437 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~---------~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~ 437 (469)
.+.|.|.+.....|||.+.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +++++++
T Consensus 5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~-~~~~~~~ 83 (103)
T 2fcf_A 5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDAS-HEQAVEA 83 (103)
T ss_dssp CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHH
T ss_pred CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHH
Confidence 467777666667999999876542 1489999999999999999 9999999999999999999 9999999
Q ss_pred HHhCCC
Q psy14977 438 VISFSH 443 (469)
Q Consensus 438 Lk~~g~ 443 (469)
|+..+.
T Consensus 84 l~~~~~ 89 (103)
T 2fcf_A 84 IRKAGN 89 (103)
T ss_dssp HHTCCS
T ss_pred HHhCCC
Confidence 988654
No 240
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.15 E-value=8.4e-11 Score=100.43 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=65.3
Q ss_pred cceEEEEEecCCCcccEEEeccccc-------CCcEEEEEecCCCHHHH-cCCCCCcEEEEEecEEecCcchHHHHHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-------NLGIFITGVDKDSVAER-AGLLVSQLTLYQFIKEFLILSDHDKDFDTV 438 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-------~~GI~V~~V~pgs~A~~-aGLr~GD~IL~VNG~sv~~~s~h~eav~~L 438 (469)
..+.|.|.++...+|||.|.++.+. ..+++|..|.++++|++ +||++||+|++|||+++.+++ |++++++|
T Consensus 10 ~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~-~~~~~~~l 88 (114)
T 1uew_A 10 QTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMP-HADIVKLI 88 (114)
T ss_dssp CCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSC-HHHHHHHH
T ss_pred cceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCC-HHHHHHHH
Confidence 4578888766667999999876432 23679999999999999 899999999999999999999 99999999
Q ss_pred HhCCC
Q psy14977 439 ISFSH 443 (469)
Q Consensus 439 k~~g~ 443 (469)
+..++
T Consensus 89 ~~~g~ 93 (114)
T 1uew_A 89 KDAGL 93 (114)
T ss_dssp HHTTT
T ss_pred HcCCC
Confidence 98555
No 241
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.15 E-value=1.8e-10 Score=97.09 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=63.1
Q ss_pred cceEEEEEe-cCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHH
Q psy14977 367 TVRKVELNI-EPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVI 439 (469)
Q Consensus 367 ~~~~V~L~~-~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk 439 (469)
..+.|+|.+ ....+|||.+.++.+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ +++++.+|+
T Consensus 12 ~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~l~ 90 (108)
T 2jre_A 12 SLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMA-QSDVVEVLR 90 (108)
T ss_dssp EEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSC-HHHHHHHHH
T ss_pred EEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHH
Confidence 345556543 3345999999987542 3499999999999999999 9999999999999999998 999999998
Q ss_pred hCCC
Q psy14977 440 SFSH 443 (469)
Q Consensus 440 ~~g~ 443 (469)
..++
T Consensus 91 ~~g~ 94 (108)
T 2jre_A 91 NAGN 94 (108)
T ss_dssp HHCS
T ss_pred cCCC
Confidence 7544
No 242
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=5e-10 Score=97.55 Aligned_cols=86 Identities=41% Similarity=0.730 Sum_probs=72.3
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..++|+|.... ..+|||.+.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.+++..
T Consensus 20 ~~~~v~v~~~~--~~~lG~~~~~~~~~-~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~------- 89 (128)
T 1uf1_A 20 DEKKVNLVLGD--GRSLGLTIRGGAEY-GLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRL------- 89 (128)
T ss_dssp SEEEEEEECCS--SCCCCEEEECCTTT-TCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHH-------
T ss_pred cEEEEEEEECC--CCccCEEEECcccC-CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHH-------
Confidence 44677777653 26799999987654 468999999999999999999999999999999999999888888
Q ss_pred cceEeecCcEEEEEEECCCC
Q psy14977 283 EGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++.+..+.|+|.|...
T Consensus 90 ----~~~~~~v~l~v~R~g~ 105 (128)
T 1uf1_A 90 ----LKSSRHLILTVKDVGR 105 (128)
T ss_dssp ----HTTCSEEEEEEECCSC
T ss_pred ----HhcCCeEEEEEEECCc
Confidence 4556789999988765
No 243
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.14 E-value=1.5e-10 Score=94.44 Aligned_cols=66 Identities=17% Similarity=0.122 Sum_probs=57.3
Q ss_pred EEEEec-CCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 371 VELNIE-PGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 371 V~L~~~-~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
|+|.+. ....|||.+. .++||.+|.++|+|+++| |++||+|++|||+++.+++ |++++++|+..+.
T Consensus 4 v~l~~~~~~~~~G~~~~------~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~-~~~~~~~i~~~~~ 71 (88)
T 3e17_A 4 VLLMKSRANEEYGLRLG------SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMS-LTDARKLIEKSRG 71 (88)
T ss_dssp EEEECBTTBCCCCEEEE------EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHHTTT
T ss_pred EEEEeCCCCCCCCEEEe------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 344332 3358999886 379999999999999999 9999999999999999999 9999999998876
No 244
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.14 E-value=2.3e-10 Score=97.14 Aligned_cols=85 Identities=27% Similarity=0.359 Sum_probs=69.6
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCC-CCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGL-RPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL-~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
..+|+|.|.. +.||||.+....+ ..+++|..|.+++||+++|| +.||+|++|||+++.++++.++..+|+.
T Consensus 2 ~~~v~l~~~~--~~glG~~~~~~~~--~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~---- 73 (112)
T 1qau_A 2 VISVRLFKRK--VGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG---- 73 (112)
T ss_dssp EEEEEEECBT--TTBTSEEEEECSS--SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHH----
T ss_pred EEEEEEEcCC--CCceeEEEEecCC--CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh----
Confidence 3578888864 5789999988664 45899999999999999997 9999999999999999989999998762
Q ss_pred cceEeecCcEEEEEEECCC
Q psy14977 283 EGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 74 -----~~g~~v~l~v~R~g 87 (112)
T 1qau_A 74 -----IASETHVVLILRGP 87 (112)
T ss_dssp -----SCSSSEEEEEEECC
T ss_pred -----CCCCcEEEEEEeCC
Confidence 23566677776654
No 245
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=2.1e-11 Score=106.25 Aligned_cols=86 Identities=27% Similarity=0.469 Sum_probs=71.1
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCC-----------------------C----CCCcEEEEEeCCCCHHHHcCCCCCCEE
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGAN-----------------------N----PGVGVYISRVEEGSIAERAGLRPGDSI 256 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~-----------------------~----~~~gi~V~~V~pgspA~~aGL~~GD~I 256 (469)
+++|+|.|.. .||||+|.+... . ...+++|..|.+++||+++||++||+|
T Consensus 9 ~r~v~l~r~~---~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I 85 (126)
T 2yuy_A 9 PKTVTLKRTS---QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRI 85 (126)
T ss_dssp CCCEEEECCS---SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCC
T ss_pred CEEEEEEECC---CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEE
Confidence 4779999975 789999975110 0 125699999999999999999999999
Q ss_pred EEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 257 LQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 257 l~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
++|||+++.++++.+++.+|+ ..+..+.|+|.+...
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~----------~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQ----------NSDTTLELSVMPKDS 121 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHH----------TCTTEEEEECCCCCC
T ss_pred EEECCEECCCCCHHHHHHHHH----------cCCCEEEEEEEECCC
Confidence 999999999999999999965 347889999887654
No 246
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=4.9e-11 Score=99.59 Aligned_cols=83 Identities=28% Similarity=0.476 Sum_probs=67.4
Q ss_pred EEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHc-CCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERA-GLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 205 ~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~a-GL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
+++++.+.. ..+|||++.++.+. ..+++|..|.+++||+++ ||++||+|++|||+++.++ +.+++..++
T Consensus 11 ~~~~v~~~~--~~~~G~~~~gg~~~-~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~------ 80 (100)
T 2edp_A 11 QYVPVQLQG--GAPWGFTLKGGLEH-CEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIK------ 80 (100)
T ss_dssp EEEEEECCS--CSCCCCCEEEEGGG-TEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHH------
T ss_pred EEEEEEECC--CCCcCEEEeccCCC-CCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHH------
Confidence 566666653 26899999987764 457999999999999999 8999999999999999987 788888855
Q ss_pred ceEeecCcEEEEEEECCC
Q psy14977 284 GQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 81 ----~~~~~v~l~v~R~~ 94 (100)
T 2edp_A 81 ----GSFRILKLIVRRRN 94 (100)
T ss_dssp ----TCCSSCEEEEEECC
T ss_pred ----hCCCeEEEEEEeCC
Confidence 33567788887754
No 247
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.14 E-value=1.4e-10 Score=96.90 Aligned_cols=75 Identities=20% Similarity=0.129 Sum_probs=63.3
Q ss_pred CcceEEEEEecCCCcccEEEecccc--cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 366 DTVRKVELNIEPGQSLGLMIRGGVE--YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 366 ~~~~~V~L~~~~g~~LGfsi~Gg~e--~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
+..+.|++.+.++.+|||.+..... ...+++|.+|.++++|+++| |++||+|++|||+++.+.+ +++++++|+..
T Consensus 8 ~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~-~~~~~~~l~~~ 85 (101)
T 2yt7_A 8 DNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLP-LAACQAAVRET 85 (101)
T ss_dssp CCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSC-HHHHHHHHHHT
T ss_pred CceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 4568888887777899999974221 12369999999999999965 9999999999999999889 99999999873
No 248
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.74 E-value=4.6e-12 Score=108.54 Aligned_cols=76 Identities=26% Similarity=0.291 Sum_probs=66.8
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHH-cCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAER-AGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~-aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+....+|||.+.++.+...+++|..|.++|+|++ +||++||+|++|||+++.+++ +++++++|+..++
T Consensus 27 ~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~-~~~~~~~l~~~~~ 103 (112)
T 2lob_A 27 GIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTK-HKEAVTILSQQRG 103 (112)
Confidence 456777776666799999998877667899999999999999 789999999999999999998 9999999987654
No 249
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.13 E-value=1.4e-10 Score=96.06 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=62.9
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
....++|......+|||.+... ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~-~~~~~~~~~~~~~ 81 (96)
T 2qkv_A 8 EKFNVDLMKKAGKELGLSLSPN---EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLP-FQVSYALFKGANG 81 (96)
T ss_dssp CCEEEEEECBTTBCCCEEEEEC---SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCC-HHHHHHHHHTCSS
T ss_pred ceEEEEEEeCCCCCccEEEEeC---CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHhcCCC
Confidence 3456677655667999998752 3689999999999999999 9999999999999999999 9999999988765
No 250
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.13 E-value=9.1e-11 Score=101.10 Aligned_cols=65 Identities=18% Similarity=0.158 Sum_probs=57.6
Q ss_pred cCCCcccEEEecccccC-CcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 376 EPGQSLGLMIRGGVEYN-LGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 376 ~~g~~LGfsi~Gg~e~~-~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
++..+|||+|.++.+.. ..++|.+|.++++|+++ ||++||+|++|||+++.+++ |++++++|+..
T Consensus 25 ~~~~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~-~~~~~~~l~~~ 91 (118)
T 1v6b_A 25 KKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYT-LAEAEAALQKA 91 (118)
T ss_dssp ESCSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCB-HHHHHHHHHHH
T ss_pred CCCCccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHHh
Confidence 44469999999887543 35999999999999999 69999999999999999999 99999999864
No 251
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.13 E-value=1.1e-10 Score=109.02 Aligned_cols=75 Identities=24% Similarity=0.389 Sum_probs=67.6
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+....+|||.+.++.+...+++|..|.++|+|+++||++||+|++|||+++.+++ +++++++|+. ++
T Consensus 84 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~-~~~~~~~l~~-~~ 158 (192)
T 3k1r_A 84 KLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCT-HEEVINLIRT-EK 158 (192)
T ss_dssp SCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCC-HHHHHHHHTS-SS
T ss_pred ceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHcC-CC
Confidence 457788876666799999998877677999999999999999999999999999999999999 9999999998 54
No 252
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.13 E-value=1.6e-10 Score=100.25 Aligned_cols=75 Identities=19% Similarity=0.300 Sum_probs=63.9
Q ss_pred cceEEEEEecCCCcccEEEeccccc-CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+. ..+|||.+.++.+. ..+++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 25 ~~~~v~l~k~-~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~-~~~~~~~~~~~~~ 101 (124)
T 2daz_A 25 ELHIIELEKD-KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRS-HQNASAIIKTAPS 101 (124)
T ss_dssp EEEEEEEECC-SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSC-HHHHHHHHHHSCS
T ss_pred ceEEEEEEeC-CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3455666433 35999999988653 3699999999999999999 9999999999999999999 9999999988765
No 253
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.13 E-value=1.5e-10 Score=100.69 Aligned_cols=76 Identities=32% Similarity=0.358 Sum_probs=64.6
Q ss_pred cceEEEEEecCCCcccEEEeccccc---------CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY---------NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFD 436 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~---------~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~ 436 (469)
..+.+++.+.....|||.+.++.+. ..|++|..|.++|||+++| |++||+|++|||+++.+++ ++++++
T Consensus 24 ~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~ 102 (123)
T 2iwq_A 24 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDAS-HEQAVE 102 (123)
T ss_dssp CCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHH
T ss_pred CCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHH
Confidence 3577777666667999999875531 2489999999999999999 9999999999999999999 999999
Q ss_pred HHHhCCC
Q psy14977 437 TVISFSH 443 (469)
Q Consensus 437 ~Lk~~g~ 443 (469)
+|+..+.
T Consensus 103 ~l~~~~~ 109 (123)
T 2iwq_A 103 AIRKAGN 109 (123)
T ss_dssp HHHHCCS
T ss_pred HHHcCCC
Confidence 9988754
No 254
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=2.2e-10 Score=93.81 Aligned_cols=70 Identities=19% Similarity=0.129 Sum_probs=59.9
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+. ..+|||.+.+. .+++|..|.++|+|+++||++||+|++|||+++.+++ +.+++++|+..++
T Consensus 4 ~r~v~l~~~-~~g~G~~l~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~-~~~~~~~l~~~~~ 73 (91)
T 2f5y_A 4 YRQITIPRG-KDGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWK-CVELAHEIRSCPS 73 (91)
T ss_dssp EEEEEEECB-TTBTSEEEECS----SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHTCSS
T ss_pred eEEEEEEeC-CCCccEEEecC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 466676533 35899999754 4799999999999999999999999999999999999 9999999987554
No 255
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=3.2e-10 Score=94.09 Aligned_cols=82 Identities=21% Similarity=0.323 Sum_probs=67.9
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
..+|+|.|.. .||||+|.... .+++|..|.++ |+++||++||+|++|||+++.+++|++++++|+.
T Consensus 11 ~~~v~l~~~~---~g~G~~i~~~~----~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~----- 76 (96)
T 1ujv_A 11 LMTLTIVKGA---QGFGFTIADSP----TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKD----- 76 (96)
T ss_dssp CEEEEEECCS---SSSSEEEEEET----TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHH-----
T ss_pred EEEEEEEeCC---CceeEEEEcCC----CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-----
Confidence 4778899875 89999997533 27999999984 7889999999999999999999999999999762
Q ss_pred ceEeecCcEEEEEEECCCC
Q psy14977 284 GQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 77 ---~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 77 ---CPIGSETSLIIHRGSG 92 (96)
T ss_dssp ---SCTTSEEEEEEECCSS
T ss_pred ---CCCCCEEEEEEEECCC
Confidence 1237899999988654
No 256
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.12 E-value=2.8e-10 Score=93.85 Aligned_cols=73 Identities=23% Similarity=0.271 Sum_probs=60.8
Q ss_pred eEEEEEecCCCcccEEEecccc------cCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVE------YNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e------~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.+... ..+|||.+.++.+ ...+++|..|.++++|+++||++||+|++|||+++.+++ +.+++..++..+
T Consensus 5 ~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~~~~~g 82 (97)
T 2w4f_A 5 LTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAE-HHEAVEALRGAG 82 (97)
T ss_dssp EEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHTSC
T ss_pred EEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcC-HHHHHHHHhCCC
Confidence 44555433 4699999998754 246999999999999999999999999999999999999 888888887665
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
+
T Consensus 83 ~ 83 (97)
T 2w4f_A 83 T 83 (97)
T ss_dssp S
T ss_pred C
Confidence 4
No 257
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=2e-10 Score=100.05 Aligned_cols=75 Identities=47% Similarity=0.651 Sum_probs=64.8
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.++|.+.....|||.+.++.++..|++|..|.++++|+++||++||+|++|||+++.+++ +.++++.++....
T Consensus 21 ~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 95 (128)
T 1uf1_A 21 EKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNIL-HDEAVRLLKSSRH 95 (128)
T ss_dssp EEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCC-HHHHHHHHTTCSE
T ss_pred EEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCC-HHHHHHHHhcCCe
Confidence 35666666555789999998766667999999999999999999999999999999999999 8999999987543
No 258
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=9.3e-11 Score=101.50 Aligned_cols=74 Identities=19% Similarity=0.208 Sum_probs=62.3
Q ss_pred cceEEEEEecCCCcccEEEeccc----ccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGV----EYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~----e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.|.|++....+|||.+.++. +...+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..
T Consensus 15 ~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~-~~~~~~~l~~~ 93 (122)
T 1v5q_A 15 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDST-FEEANQLLRDS 93 (122)
T ss_dssp EEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSC-HHHHHHHHHHH
T ss_pred eeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 34556664444469999999762 234689999999999999999 9999999999999999999 99999999876
No 259
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.12 E-value=1.5e-10 Score=98.49 Aligned_cols=72 Identities=22% Similarity=0.346 Sum_probs=60.9
Q ss_pred EEEEecCC-CcccEEEec---ccc---cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 371 VELNIEPG-QSLGLMIRG---GVE---YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 371 V~L~~~~g-~~LGfsi~G---g~e---~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
+++.+.++ .+|||++.+ +.+ ...|++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++..+
T Consensus 6 ~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~~g 84 (113)
T 2g5m_B 6 FPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVT-QSFAASVLRNTK 84 (113)
T ss_dssp EEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCC-HHHHHHHHHHSC
T ss_pred EEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHhcCC
Confidence 34444444 599999998 333 23599999999999999999 9999999999999999999 999999999876
Q ss_pred C
Q psy14977 443 H 443 (469)
Q Consensus 443 ~ 443 (469)
+
T Consensus 85 ~ 85 (113)
T 2g5m_B 85 G 85 (113)
T ss_dssp S
T ss_pred C
Confidence 5
No 260
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.12 E-value=1.8e-10 Score=100.41 Aligned_cols=76 Identities=24% Similarity=0.221 Sum_probs=64.2
Q ss_pred cceEEEEEecCCCcccEEEecccc-----cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVE-----YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e-----~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|......+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+.
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~l~~ 93 (129)
T 2dmz_A 15 ETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFA-NHDVVEVLRN 93 (129)
T ss_dssp EEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCC-HHHHHHHHHH
T ss_pred cEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHc
Confidence 345566644456699999998654 23589999999999999999 9999999999999999999 9999999998
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 94 ~~~ 96 (129)
T 2dmz_A 94 AGQ 96 (129)
T ss_dssp CCS
T ss_pred CCC
Confidence 554
No 261
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.12 E-value=3.4e-11 Score=100.59 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=58.4
Q ss_pred CcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 379 QSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 379 ~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+|||.+.++.+...+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 22 ~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~~g~ 86 (103)
T 1wfv_A 22 KGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMT-HARAIELIKSGGR 86 (103)
T ss_dssp TSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCC-HHHHHHHHHHHCS
T ss_pred CcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 48999999887666699999999999999999 9999999999999999999 9999999986554
No 262
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=2.3e-10 Score=100.13 Aligned_cols=83 Identities=22% Similarity=0.282 Sum_probs=70.8
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
...++.|.+.. .||||++.+.. .+++|..|.+++||+++| |++||+|++|||+++.+.++.+++.+|+.
T Consensus 27 ~~~~~~l~k~~---~glG~~i~~~~----~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~--- 96 (126)
T 1wif_A 27 KVIQTKLTVGN---LGLGLVVIQNG----PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQN--- 96 (126)
T ss_dssp CEEEEEEECCT---TCCCCCEEEET----TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTS---
T ss_pred ceEEEEEecCC---ceEeEEEEcCC----CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc---
Confidence 45677888864 89999998743 379999999999999999 99999999999999999999999999661
Q ss_pred ccceEeecCcEEEEEEECC
Q psy14977 282 KEGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~ 300 (469)
...+..+.|+|.|.
T Consensus 97 -----~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 97 -----ITIGTVLQIKAYRG 110 (126)
T ss_dssp -----CCSSCEEEEEEESS
T ss_pred -----CCCCCEEEEEEEEC
Confidence 23478999999986
No 263
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=3.6e-10 Score=95.67 Aligned_cols=72 Identities=26% Similarity=0.310 Sum_probs=60.4
Q ss_pred EEEEecC-CCcccEEEecccc------cCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 371 VELNIEP-GQSLGLMIRGGVE------YNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 371 V~L~~~~-g~~LGfsi~Gg~e------~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+.+.+.+ ..+|||.+.++.+ ...+++|..|.++++|+++||++||+|++|||+++.+++ +.+++..++..++
T Consensus 17 ~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~~~g~ 95 (110)
T 1x5q_A 17 LTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAE-HHEAVEALRGAGT 95 (110)
T ss_dssp EEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHSCCS
T ss_pred EEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcC-HHHHHHHhhCCCC
Confidence 3333343 4599999998754 346999999999999999999999999999999999999 8889888887554
No 264
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.10 E-value=1.9e-10 Score=96.77 Aligned_cols=75 Identities=21% Similarity=0.208 Sum_probs=63.6
Q ss_pred cceEEEEEecCCCcccEEEeccccc------CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY------NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~------~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|+|.+.+..+|||.+.++.+. ..+++|..|.++++|+ +||++||+|++|||+++.+++ +.+++..++.
T Consensus 7 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 84 (107)
T 2h2b_A 7 EQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVE-HAFAVQQLRK 84 (107)
T ss_dssp EEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCC-HHHHHHHHHT
T ss_pred eeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCcc-HHHHHHHhhC
Confidence 4567777766667999999987652 3599999999999999 899999999999999999999 8888887776
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 85 ~g~ 87 (107)
T 2h2b_A 85 SGK 87 (107)
T ss_dssp CCS
T ss_pred CCC
Confidence 555
No 265
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.10 E-value=9.2e-10 Score=117.87 Aligned_cols=164 Identities=15% Similarity=0.063 Sum_probs=97.2
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCC-----------HHHHHHHhhhcCcccceEeecCcEEEEEEEC
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGIS-----------HEEALKMCFFEGYKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s-----------~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~ 299 (469)
..|++|..|.+++||+++ |+.||.|++|||+.|.... ...++...+......++|+|+++..++.|.-
T Consensus 276 ~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl 354 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVL 354 (539)
T ss_dssp SBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred cCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 369999999999999876 9999999999999996532 1334444332223347777777777776654
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCCCccCCCCCCCCCCCCCCCCccccCCCCCcceEEEEEe----
Q psy14977 300 PSIPPQAPRNHPLPPPPAWTMRQAYSWIDRQGRPCSPPLDYARSVIPMPPPPPPPPRWNYSARSSKDTVRKVELNI---- 375 (469)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~L~~---- 375 (469)
...+...........+ ...... +..-..|..
T Consensus 355 ~~~~~~~~~~~~~~~p---------------------------------------~~~~~~------Gl~f~~Lt~~~~~ 389 (539)
T 4fln_A 355 RPRVHLVPYHIDGGQP---------------------------------------SYIIVA------GLVFTPLSEPLIE 389 (539)
T ss_dssp BCCCCSSCSCTTSSCC---------------------------------------CCCCST------TEEEEECCHHHHT
T ss_pred ccCccccccccccCCC---------------------------------------cccccc------ceEEeeCCHHHHH
Confidence 4332110000000000 000000 000000000
Q ss_pred -cCCCcccEEEe-------cccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 376 -EPGQSLGLMIR-------GGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 376 -~~g~~LGfsi~-------Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.....+++.+. .......+++|.+|.++++|+..|++.||+|++|||++|.++. ++.++|+++.+
T Consensus 390 ~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~---~l~~~l~~~k~ 462 (539)
T 4fln_A 390 EECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIH---HLAHLIDMCKD 462 (539)
T ss_dssp TSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHH---HHHHHHHTCCS
T ss_pred hhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHH---HHHHHHHHcCC
Confidence 00001111110 0001124899999999999999999999999999999999955 77888877654
No 266
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.10 E-value=2.3e-10 Score=95.76 Aligned_cols=72 Identities=25% Similarity=0.383 Sum_probs=60.2
Q ss_pred eEEEEEecCCC---cccEEEeccccc------------CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHH
Q psy14977 369 RKVELNIEPGQ---SLGLMIRGGVEY------------NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDK 433 (469)
Q Consensus 369 ~~V~L~~~~g~---~LGfsi~Gg~e~------------~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~e 433 (469)
+.+++.+.... .|||++.++.+. ..|++|..|.++|+|+++||++||+|++|||+++.+++ |++
T Consensus 6 ~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~ 84 (104)
T 3sfj_A 6 QRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVT-HDQ 84 (104)
T ss_dssp EEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHH
T ss_pred EEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHH
Confidence 45555443322 799999976642 45899999999999999999999999999999999999 999
Q ss_pred HHHHHHhC
Q psy14977 434 DFDTVISF 441 (469)
Q Consensus 434 av~~Lk~~ 441 (469)
++++|+..
T Consensus 85 ~~~~l~~~ 92 (104)
T 3sfj_A 85 ARKRLTKR 92 (104)
T ss_dssp HHHHHTCT
T ss_pred HHHHHHhC
Confidence 99999763
No 267
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.10 E-value=1.6e-10 Score=98.53 Aligned_cols=74 Identities=24% Similarity=0.301 Sum_probs=66.1
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
.+.|.+.++...+|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.++. +.+++.+++...
T Consensus 16 ~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~-~~~~~~~~~~~~ 89 (114)
T 1x5n_A 16 EKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLD-HKEAVNVLKSSR 89 (114)
T ss_dssp SEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCC-TTHHHHHHHHCS
T ss_pred cEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHhcCC
Confidence 47777777766799999998876667999999999999999999999999999999999999 889999998764
No 268
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.09 E-value=9.8e-11 Score=95.81 Aligned_cols=73 Identities=21% Similarity=0.129 Sum_probs=60.9
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|.|.+.. .+|||.+.+..+ ..+++|..|.++|+|+++||++||+|++|||+++.+++ ++++.++|+..++
T Consensus 4 pr~v~l~k~~-~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 76 (91)
T 2vsp_A 4 PKLCRLAKGE-NGYGFHLNAIRG-LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEP-YEKVVDRIQSSGK 76 (91)
T ss_dssp EEEEEEECBT-TBTSCCCBCCTT-CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSC-HHHHHHHHTTSCS
T ss_pred cEEEEEEeCC-CcccEEEEeccC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4677775543 389999986543 35889999999999999999999999999999999888 9999999987644
No 269
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.09 E-value=4.1e-10 Score=95.38 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=60.5
Q ss_pred eEEEEEecCC-CcccEEEeccccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 369 RKVELNIEPG-QSLGLMIRGGVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 369 ~~V~L~~~~g-~~LGfsi~Gg~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
+.+.+.+.++ .+|||.+.+..+. ..+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..
T Consensus 11 ~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~-~~~~~~~l~~~ 87 (111)
T 2koj_A 11 KRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKS-QEEVVSLLRST 87 (111)
T ss_dssp EEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSC-HHHHHHHHHHC
T ss_pred cEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 3344444444 4999999976532 2589999999999999999 9999999999999999999 99999999975
No 270
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=2.3e-10 Score=98.07 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=60.1
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|.+... ...|||.+.++.+ .|++|..|.++++|+++||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 20 ~~~v~l~~~-~~~lG~~~~~~~~--~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~-~~~~~~~~~~~g~ 91 (117)
T 1uit_A 20 PRHVKVQKG-SEPLGISIVSGEK--GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSAT-EQQARLIIGQQCD 91 (117)
T ss_dssp CEEEEEECS-SCCCCEEEEECTT--SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCC-HHHHHHHTTSCCS
T ss_pred CEEEEEEeC-CCCccEEEEccCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 456676433 3599999987653 5999999999999999999999999999999999999 8888776766555
No 271
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.6e-10 Score=97.60 Aligned_cols=75 Identities=24% Similarity=0.305 Sum_probs=63.6
Q ss_pred cceEEEEEecCCCcccEEEe-----ccccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHH
Q psy14977 367 TVRKVELNIEPGQSLGLMIR-----GGVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDT 437 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~-----Gg~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~ 437 (469)
..+.|+|.+ .+.+|||.+. ++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+
T Consensus 9 ~~~~v~l~k-~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~ 86 (108)
T 1q7x_A 9 DIFEVELAK-NDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGAT-HKQAVET 86 (108)
T ss_dssp SEEEEEEES-SSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCT-TSHHHHH
T ss_pred cEEEEEEEE-CCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHH
Confidence 345666643 2459999999 76653 3699999999999999999 9999999999999999998 9999999
Q ss_pred HHhCCC
Q psy14977 438 VISFSH 443 (469)
Q Consensus 438 Lk~~g~ 443 (469)
++..++
T Consensus 87 ~~~~g~ 92 (108)
T 1q7x_A 87 LRNTGQ 92 (108)
T ss_dssp HHHTTS
T ss_pred HHcCCC
Confidence 998765
No 272
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.08 E-value=3.3e-10 Score=94.10 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=59.5
Q ss_pred cceEEEEEecCC--CcccEEEecccc-cCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPG--QSLGLMIRGGVE-YNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g--~~LGfsi~Gg~e-~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.+.|++... .+|||++....+ ...+++|..|.++|+|+++||++||+|++|||+++.+++ ++++.++++.
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~-~~~l~~~l~~ 81 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALN-SSMLKDFLSQ 81 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCC-HHHHHHHHHS
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHhC
Confidence 356667765543 389999987443 235899999999999999999999999999999999999 9999999874
No 273
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.08 E-value=4.2e-11 Score=100.47 Aligned_cols=83 Identities=23% Similarity=0.401 Sum_probs=69.2
Q ss_pred EEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccc
Q psy14977 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEG 284 (469)
Q Consensus 205 ~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~ 284 (469)
++|.+... .+|||.+.++.+. ..+++|..|.+++||+++||++||+|++|||+++.++++.++.++|+
T Consensus 7 ~~v~~~~~----~~lG~~l~~g~~~-~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~------- 74 (103)
T 1v5l_A 7 GNVVLPGP----APWGFRLSGGIDF-NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK------- 74 (103)
T ss_dssp BCCEEESS----SCCSBCCEEETTT-TEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHT-------
T ss_pred EEEEEcCC----CCcCEEEeccccC-CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-------
Confidence 34555433 6899999988764 45899999999999999999999999999999999999999999965
Q ss_pred eEeecCcEEEEEEECCCC
Q psy14977 285 QMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 285 ~Ilr~g~~v~l~V~~~~~ 302 (469)
..+..+.|+|.|...
T Consensus 75 ---~~g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 75 ---AASYQLCLKIDRAET 89 (103)
T ss_dssp ---TCCSEEECEECCCTT
T ss_pred ---hCCCeEEEEEEECCe
Confidence 227889999987654
No 274
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.08 E-value=8.6e-11 Score=100.44 Aligned_cols=82 Identities=22% Similarity=0.304 Sum_probs=68.1
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
+++|+|.|.. .+|||.+.+. .+++|..|.+++||+++||+.||+|++|||+++.++++++++++|+
T Consensus 16 ~r~v~l~~~~---~~~G~~l~~~-----~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~------ 81 (111)
T 1vae_A 16 PRGIHFTVEE---GDLGFTLRGN-----TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLK------ 81 (111)
T ss_dssp CCCCCEECCS---SCCSCCEESS-----SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHH------
T ss_pred CeEEEEEcCC---CcccEEEeCC-----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH------
Confidence 4678888864 7899999764 3789999999999999999999999999999999989999998865
Q ss_pred ceEeecCcEEEEEEECCCC
Q psy14977 284 GQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.+...
T Consensus 82 ---~~~~~~v~l~V~~~~~ 97 (111)
T 1vae_A 82 ---SFGGEEVEMKVVSLLD 97 (111)
T ss_dssp ---HTTTSEECEEEECEEC
T ss_pred ---hCCCceEEEEEEecCC
Confidence 2235568888877543
No 275
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.08 E-value=5.9e-10 Score=92.30 Aligned_cols=72 Identities=19% Similarity=0.137 Sum_probs=60.9
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
.+.+.+... ..+|||.+.++.+ ..+++|..|.++|+|+++||++||+|++|||+++.+++ ++++.++|+...
T Consensus 10 ~~~~~l~~~-~~g~G~~~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~ 81 (98)
T 2jxo_A 10 PRLCTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQ-HGDVVSAIRAGG 81 (98)
T ss_dssp CEEEEEECT-TTCCCEEEECCCS-SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHTTT
T ss_pred cEEEEEEeC-CCcccEEEEecCC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCC
Confidence 355666432 3599999987652 34899999999999999999999999999999999999 999999998763
No 276
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.07 E-value=2.5e-10 Score=96.79 Aligned_cols=72 Identities=22% Similarity=0.272 Sum_probs=62.0
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+ .+.+|||.+.++.+ .+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..++
T Consensus 16 ~~~v~l~~-~~~~lG~~l~~~~~--~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~l~~~g~ 88 (111)
T 2dlu_A 16 VEEVELIN-DGSGLGFGIVGGKT--SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMT-SEQVAQVLRNCGN 88 (111)
T ss_dssp EEEEEEEC-CSSCCCEEEECCSS--SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSC-HHHHHHHHHHHCS
T ss_pred eEEEEEEe-CCCccCEEEeccCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 45666643 34589999997653 589999999999999999 9999999999999999999 9999999987655
No 277
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.07 E-value=5.8e-10 Score=91.66 Aligned_cols=72 Identities=17% Similarity=0.290 Sum_probs=59.9
Q ss_pred EEEEecC-CCcccEEEecccc----cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 371 VELNIEP-GQSLGLMIRGGVE----YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 371 V~L~~~~-g~~LGfsi~Gg~e----~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+++.+++ ..+|||.+.+..+ ...+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 6 ~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 83 (97)
T 2iwn_A 6 FDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFT-NQQAVEVLRHTGQ 83 (97)
T ss_dssp EEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSC-HHHHHHHHHTCCS
T ss_pred EEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3344443 3589999997743 24699999999999999999 9999999999999999999 9999999987554
No 278
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=5.2e-11 Score=98.78 Aligned_cols=81 Identities=26% Similarity=0.413 Sum_probs=68.9
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.++|+|.|++ ...+|||.+.+ ..+++|..|.+++||+ +||++||+|++|||+++.++++.+++..++
T Consensus 9 ~~~v~l~~~~-~~~~~G~~l~~-----~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~------ 75 (96)
T 2edv_A 9 RHTVKIDKDT-LLQDYGFHISE-----SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILR------ 75 (96)
T ss_dssp EEEEEECCCS-SSCSCSBCCCS-----SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHH------
T ss_pred cEEEEEEECC-CCCcccEEEec-----CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHH------
Confidence 5789999975 23489999876 2389999999999996 899999999999999999999999998854
Q ss_pred ceEeecCcEEEEEEECCC
Q psy14977 284 GQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 76 ----~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 76 ----EAEDSLSITVVRCT 89 (96)
T ss_dssp ----HCSSCEEEEEEECC
T ss_pred ----cCCCeEEEEEEECC
Confidence 35788999998865
No 279
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=2.5e-10 Score=95.96 Aligned_cols=74 Identities=22% Similarity=0.219 Sum_probs=63.3
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+ ...+|||.+.+.. ...+++|..|.++++|+++||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 8 ~~r~v~l~k-~~~~~G~~l~~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 81 (106)
T 2eei_A 8 QPRLCYLVK-EGGSYGFSLKTVQ-GKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDAS-HEEVVEKVKKSGS 81 (106)
T ss_dssp SSEEEEEEC-CSSSCSCCEECCS-SCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCC-HHHHHHHHHHHCS
T ss_pred CCEEEEEEE-CCCCCCEEEEecc-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 357777765 3569999997654 346899999999999999999999999999999999999 9999999987655
No 280
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.05 E-value=6.3e-11 Score=95.20 Aligned_cols=70 Identities=21% Similarity=0.170 Sum_probs=59.1
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+.. .+|||.+.+. .+++|..|.++++|+++||++||+|++|||+++.+++ |++++++++..++
T Consensus 3 ~r~v~l~~~~-~g~G~~~~~~----~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~~ 72 (83)
T 2kv8_A 3 VRSVEVARGR-AGYGFTLSGQ----APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKAS-HEDVVKLIGKCSG 72 (83)
T ss_dssp EEEEEECCCS-SCCSCBCCCS----SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCC-HHHHHHHHTTCSS
T ss_pred cEEEEEEeCC-CcccEEEEcC----CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 4666664332 5899988754 3799999999999999999999999999999999999 9999999987643
No 281
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.05 E-value=2.7e-10 Score=95.15 Aligned_cols=74 Identities=26% Similarity=0.290 Sum_probs=63.0
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+. ..+|||.+.+..+ ..+++|..|.++|+|+++||++||+|++|||+++.+++ +++++++|+..++
T Consensus 6 ~~r~v~l~k~-~~g~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 79 (102)
T 2d90_A 6 SGRVVVIKKG-SNGYGFYLRAGPE-QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALD-HDGVVEMIRKGGD 79 (102)
T ss_dssp SSEEEEEECC-SSSSSCEEEECSS-SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSC-HHHHHHHHHHSTT
T ss_pred CCEEEEEeeC-CCCccEEEEeecC-CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4577777543 3489999987542 35899999999999999999999999999999999999 9999999988655
No 282
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.05 E-value=6e-10 Score=102.75 Aligned_cols=75 Identities=21% Similarity=0.330 Sum_probs=65.6
Q ss_pred cceEEEEEecCCCcccEEEeccccc-----CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEY-----NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~-----~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
+.++|+|... +.+|||++.++.+. ..|++|..|.++|+|+++| |++||+|++|||+++.+++ +.+++.+++.
T Consensus 5 ~~~~v~l~~~-~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~ 82 (196)
T 3gsl_A 5 EYEEITLERG-NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVT-HSAAVEALKE 82 (196)
T ss_dssp EEEEEEEECB-TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHT
T ss_pred EEEEEEEEEC-CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHh
Confidence 4566777543 45899999998764 4699999999999999999 9999999999999999999 9999999998
Q ss_pred CCC
Q psy14977 441 FSH 443 (469)
Q Consensus 441 ~g~ 443 (469)
.++
T Consensus 83 ~g~ 85 (196)
T 3gsl_A 83 AGS 85 (196)
T ss_dssp SCS
T ss_pred CCC
Confidence 776
No 283
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=7.5e-10 Score=90.95 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=56.7
Q ss_pred ceEEEEEecC-CCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEP-GQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~-g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.+.+.... ...|||.+.+ | +|.+|.++|+|+++||++||+|++|||+++.+++ +++++++|+..++
T Consensus 12 ~~~~~i~~~~~~~~lG~~~~~------G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~-~~~~~~~l~~~g~ 80 (90)
T 1y7n_A 12 VTTVLIRRPDLRYQLGFSVQN------G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATP-HEKIVHILSNAVG 80 (90)
T ss_dssp CEEEEEEESSTTSCCCEEEET------T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSC-HHHHHHHHHHCCE
T ss_pred cceEEEEeCCCccccCeEecC------C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3455554444 3599999863 3 8999999999999999999999999999999889 9999999987643
No 284
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.04 E-value=6e-10 Score=103.99 Aligned_cols=76 Identities=20% Similarity=0.242 Sum_probs=68.5
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHc-CCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERA-GLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~a-GLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|+|.++.+.+|||.+.++.+...+++|..|.++++|+++ ||++||+|++|||+++.+++ |.+++.+++..++
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~g~ 83 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFR-HDEIISLLKNVGE 83 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSC-HHHHHHHHHTCCS
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 4567788766777999999998877778999999999999999 79999999999999999999 9999999988776
No 285
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.04 E-value=4.1e-11 Score=100.56 Aligned_cols=68 Identities=21% Similarity=0.217 Sum_probs=61.4
Q ss_pred ecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 375 IEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 375 ~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
++....|||.+.++.+...+++|..|.++++|+++||++||+|++|||+++.+++ +++++++|+..++
T Consensus 11 ~~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 78 (103)
T 1v5l_A 11 LPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMT-HADAQDRIKAASY 78 (103)
T ss_dssp EESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCC-HHHHHHHHTTCCS
T ss_pred EcCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 3556799999998877667899999999999999999999999999999999999 9999999988754
No 286
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.04 E-value=6.7e-10 Score=103.06 Aligned_cols=80 Identities=26% Similarity=0.479 Sum_probs=64.7
Q ss_pred ceEEEEEEcCCCC-------CCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc-cceEee
Q psy14977 217 HGFGICVKGGANN-------PGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK-EGQMLK 288 (469)
Q Consensus 217 ~GlGf~i~gg~~~-------~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~-~~~Ilr 288 (469)
.||||+|.|+.+. ...+++|..|.+++||++ ||+.||+|++|||+++.++++.+++..++..+.. .++|+|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 6899999998741 246999999999999999 9999999999999999999999999998755433 356666
Q ss_pred ---cCcEEEEEE
Q psy14977 289 ---SNRELSMTV 297 (469)
Q Consensus 289 ---~g~~v~l~V 297 (469)
++....+.+
T Consensus 81 ~~~~G~~~~~~v 92 (195)
T 2qbw_A 81 EVGNGAKQEIRV 92 (195)
T ss_dssp ECSSSCEEEEEE
T ss_pred cCCCCCCceeEe
Confidence 555544443
No 287
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.04 E-value=4.4e-10 Score=93.24 Aligned_cols=71 Identities=20% Similarity=0.242 Sum_probs=59.0
Q ss_pred EEEEecCCCcccEEEeccccc-------CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 371 VELNIEPGQSLGLMIRGGVEY-------NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 371 V~L~~~~g~~LGfsi~Gg~e~-------~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
++|. +.+.+|||.+.+.... ..|++|..|.++|+|+++||++||+|++|||+++.+++ +++++.+|+..++
T Consensus 6 v~l~-~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 83 (99)
T 3khf_A 6 IVIH-SSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLV-HMDVVELLLKSGN 83 (99)
T ss_dssp EEEE-C-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHHSCS
T ss_pred EEEE-eCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHhcCCC
Confidence 4443 3456999999865431 23779999999999999999999999999999999999 9999999997665
No 288
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.04 E-value=2.1e-10 Score=97.98 Aligned_cols=74 Identities=23% Similarity=0.241 Sum_probs=62.8
Q ss_pred ceEEEEEecCCCcccEEEecccccC-CcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYN-LGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~-~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.++|.. ...+|||.+.++.+.. .+++|..|.++++|+++| |++||+|++|||+++.+++ +++++++|+..++
T Consensus 18 ~~~v~l~~-~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~l~~~~~ 93 (116)
T 2dm8_A 18 EMIIEISK-GRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSS-HEEAITALRQTPQ 93 (116)
T ss_dssp CEEEEEEC-CSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSC-HHHHHHHHHTCCS
T ss_pred EEEEEEEE-CCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 35555532 2359999999876544 599999999999999999 9999999999999999999 9999999987655
No 289
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.03 E-value=9.2e-10 Score=94.47 Aligned_cols=74 Identities=22% Similarity=0.244 Sum_probs=63.8
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+. ..+|||.+.++.+ ..+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 14 ~~~~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 88 (119)
T 1tp5_A 14 EPRRIVIHRG-STGLGFNIVGGED-GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNAS-HEQAAIALKNAGQ 88 (119)
T ss_dssp SCEEEEEECT-TSCCCEEEEECGG-GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCC-HHHHHHHHHTSCS
T ss_pred ccEEEEEEEC-CCCccEEEecCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 4577777543 3579999997653 3699999999999999999 9999999999999999999 8999999988776
No 290
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.03 E-value=6.5e-10 Score=94.77 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=59.5
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|.|.+ ...+|||.+.+. .+++|..|.++++|+++||++||+|++|||+++.+++ +++++++|+..++
T Consensus 24 ~r~v~l~k-~~~~~G~~l~~~----~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~-~~dv~~~i~~~~~ 93 (109)
T 2vsv_A 24 PRSIRFTA-EEGDLGFTLRGN----APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLT-LSEVMKLLKSFGE 93 (109)
T ss_dssp CEEEEECC-GGGCCCEEEESS----SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC-HHHHHHHHHTTTT
T ss_pred CEEEEEEe-CCCceeEEEeCC----CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 46667643 235999998743 4789999999999999999999999999999999988 9999999987654
No 291
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.02 E-value=3.7e-10 Score=98.14 Aligned_cols=87 Identities=26% Similarity=0.340 Sum_probs=71.9
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCC-CCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGL-RPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL-~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
..++|+|.+.. +.||||++.+..+ ..+++|..|.+++||+++|| +.||+|++|||+++.++++.++.++|+
T Consensus 8 ~~~~v~l~~~~--~~glG~~~~~~~~--~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~---- 79 (127)
T 1b8q_A 8 NVISVRLFKRK--VGGLGFLVKERVS--KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLR---- 79 (127)
T ss_dssp CSEEEEEECTT--TSCCSCCEEECTT--SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHH----
T ss_pred ceEEEEEEeCC--CCcEeEEEEecCC--CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH----
Confidence 35788998874 4799999987654 35899999999999999997 999999999999999999999999976
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 80 -----~~~g~~v~l~v~R~g~ 95 (127)
T 1b8q_A 80 -----GIASETHVVLILRGPE 95 (127)
T ss_dssp -----SCCSSCEEEEEECCCC
T ss_pred -----hCCCCeEEEEEEeCCc
Confidence 2335677777777543
No 292
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.02 E-value=1.1e-09 Score=91.96 Aligned_cols=82 Identities=22% Similarity=0.274 Sum_probs=66.7
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.+.+.|.+.. .||||.+.... .+.+|..|.+++||+++||++||+|++|||+++...+++++...|+.+
T Consensus 18 ~~~l~l~~~~---~g~G~~l~~~~----~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~---- 86 (101)
T 3qik_A 18 AKRLLILPQE---EDYGFDIEEKN----KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQS---- 86 (101)
T ss_dssp EEEEEECCCS---SSSSEEEEEET----TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHH----
T ss_pred cCeEEEEeCC---CcccEEEEccC----CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHh----
Confidence 4667777764 78999887632 378999999999999999999999999999999878899999886621
Q ss_pred ceEeecCcEEEEEEEC
Q psy14977 284 GQMLKSNRELSMTVRS 299 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~ 299 (469)
...++.+.|.|..
T Consensus 87 ---~~~g~~v~LLV~~ 99 (101)
T 3qik_A 87 ---FCSRRPLRLLVAT 99 (101)
T ss_dssp ---HHTTCCEEEEEEC
T ss_pred ---hccCCeEEEEEec
Confidence 1347888888765
No 293
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.02 E-value=1.3e-09 Score=94.24 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=60.4
Q ss_pred eEEEEEecCC-CcccEEEeccccc---CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 369 RKVELNIEPG-QSLGLMIRGGVEY---NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 369 ~~V~L~~~~g-~~LGfsi~Gg~e~---~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
+.+.+.+.+. .+|||.+.++... ..+++|..|.++|+|+++| |++||+|++|||+++.+++ +++++++|+..
T Consensus 30 ~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~-~~~~~~~l~~~ 106 (121)
T 2kom_A 30 KRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKS-QEEVVSLLRST 106 (121)
T ss_dssp EEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSC-HHHHHHHHHHC
T ss_pred eEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCC-HHHHHHHHhcC
Confidence 3444444444 4999999977532 2589999999999999999 9999999999999999999 99999999875
No 294
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.01 E-value=8.4e-10 Score=94.72 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=55.5
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
+.+.|+|.+. ..+|||+|.++. .+.+|+.|.+ +|+.+||++||+|++|||+++.+++ |+|++++|+..
T Consensus 12 ~~~~V~L~Kg-~~G~GFsI~~~~---~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~-h~evv~~lk~~ 79 (113)
T 3soe_A 12 LLVTIPLIKG-PKGFGFAIADSP---TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLT-HLQVVEVLKQF 79 (113)
T ss_dssp EEEEEEEECB-TTBSSEEEEEET---TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSC-HHHHHHHHHHS
T ss_pred CEEEEEEEEC-CCcccEEEeCCC---CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcC
Confidence 3455555432 349999997543 4788999988 4777789999999999999999999 99999999986
No 295
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.01 E-value=9.3e-10 Score=95.71 Aligned_cols=64 Identities=28% Similarity=0.451 Sum_probs=57.5
Q ss_pred EecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 374 NIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 374 ~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.+.++..|||.+.++.+ .|++|..|.++|||+++||++||+|++|||+++.+++ +++++++|+.
T Consensus 34 ~~~~~~~lG~~l~~~~~--~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~-~~~~~~~l~~ 97 (124)
T 3tsv_A 34 KFRKGDSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNII-REEAVLFLLD 97 (124)
T ss_dssp EEECSSCCCEEEEECTT--SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCC-HHHHHHHHHH
T ss_pred EcCCCCceeEEEecCCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHh
Confidence 34566799999987654 6999999999999999999999999999999999999 9999998885
No 296
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.00 E-value=6.3e-10 Score=91.46 Aligned_cols=68 Identities=16% Similarity=0.120 Sum_probs=58.0
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..+.|.|.+ ...+|||.+.+. .+++|..|.++++|+++||++||+|++|||+++.+++ +.++++.++.
T Consensus 8 ~~r~v~l~~-~~~~~G~~l~~~----~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~~ 75 (93)
T 2dls_A 8 VQRCVIIQK-DQHGFGFTVSGD----RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSS-HLEVVKLIKS 75 (93)
T ss_dssp CEEEEEEEC-SSSSCCEEEECS----SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSC-HHHHHHHHTS
T ss_pred CCEEEEEEe-CCCceeEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHhhcC
Confidence 346667643 335999999853 5899999999999999999999999999999999999 8899998874
No 297
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.00 E-value=4.8e-10 Score=95.70 Aligned_cols=75 Identities=24% Similarity=0.226 Sum_probs=64.7
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.+.|..+....|||.+....+ ..|++|..|.++|+|+++||++||+|++|||+++.+++ +++++++|+..++
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~~~~~~l~~~g~ 87 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEE-HAQVVELVRKSGN 87 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTT-CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSC-HHHHHHHHHHTCS
T ss_pred CCEEEEEeCCCCCcccEEEEEecC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 357778877767799999886532 35899999999999999999999999999999999998 9999999987655
No 298
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=3.3e-10 Score=97.32 Aligned_cols=74 Identities=12% Similarity=0.113 Sum_probs=62.0
Q ss_pred cceEEEEEecCCC--cccEEEecccccC-CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQ--SLGLMIRGGVEYN-LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~--~LGfsi~Gg~e~~-~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.+.|.+.... .|||.+.+..+.. .+++|..|.++++|+++||++||+|++|||+++.+++ ++++.++|+..
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~-~~~~~~~l~~~ 91 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALN-SSMLKDFLSQP 91 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCC-HHHHHHHHTSS
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcC-HHHHHHHHhCC
Confidence 4567777655443 6999998754332 5899999999999999999999999999999999998 99999999864
No 299
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=1.6e-10 Score=98.06 Aligned_cols=74 Identities=22% Similarity=0.240 Sum_probs=63.6
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+. ..+|||.+.++.+ ..+++|..|.++++|+++| |++||+|++|||+++.+++ +.+++.+++..++
T Consensus 15 ~~~~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~~~~~~~ 89 (113)
T 1um7_A 15 EPRKIILHKG-STGLGFNIVGGED-GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNAT-HEQAAAALKRAGQ 89 (113)
T ss_dssp SEEEEEEECC-SSCSSBCCBCCST-TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCC-HHHHHHHHHSCCS
T ss_pred ceEEEEEEEC-CCcccEEEEeccC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 4577777543 3589999987753 4689999999999999999 9999999999999999999 9999999987665
No 300
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.99 E-value=1.8e-09 Score=100.89 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=64.0
Q ss_pred ceEEEEEecCCCcccEEEecccccC--CcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecC--cchHHHHHHHHHhCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYN--LGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLI--LSDHDKDFDTVISFS 442 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~--~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~--~s~h~eav~~Lk~~g 442 (469)
...++|.+ .+.+|||++.++.+.. .|++|..|.++|+|+++| |++||+|++|||+++.+ ++ |.+++.+++..+
T Consensus 19 ~~~v~~~~-~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~-~~~~~~~~~~~~ 96 (206)
T 3r0h_A 19 KILIELKV-EKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMT-TLKVHQLFHTTY 96 (206)
T ss_dssp CEEEEEEC-TTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSC-HHHHHHHHHSCC
T ss_pred EEEEEEEe-CCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccC-HHHHHHHHHhcC
Confidence 34555543 3469999999987643 489999999999999999 99999999999999999 99 999999999876
Q ss_pred Cc
Q psy14977 443 HE 444 (469)
Q Consensus 443 ~~ 444 (469)
+.
T Consensus 97 ~~ 98 (206)
T 3r0h_A 97 EK 98 (206)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 301
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.98 E-value=5e-10 Score=93.43 Aligned_cols=70 Identities=21% Similarity=0.199 Sum_probs=58.8
Q ss_pred eEEEEEecCC-CcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 369 RKVELNIEPG-QSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 369 ~~V~L~~~~g-~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.+.+.+. .+|||.+.+. .+++|..|.++++|+++||++||+|++|||+++.+++ +++++++|+..+.
T Consensus 15 ~~~~v~l~~~~~g~G~~~~~~----~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~-~~~~~~~l~~~~~ 85 (100)
T 1whd_A 15 EKLQITIRRGKDGFGFTICCD----SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWK-CVELAHEIRSCPS 85 (100)
T ss_dssp EEEEEEEECCSSSSSCBCCCS----SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCC-HHHHHHHHHHCSS
T ss_pred ceEEEEEECCCCeeeEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 3444444544 4899988754 5899999999999999999999999999999999999 9999999987654
No 302
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.98 E-value=5.9e-10 Score=106.26 Aligned_cols=73 Identities=29% Similarity=0.485 Sum_probs=64.6
Q ss_pred CCCCeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 200 DQLPVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 200 ~~~~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
..+.++.|+|.+.. .||||.|.++.+ ..+++|..|.+++||+++||+.||+|++|||++|.++++.+++.+|+
T Consensus 6 ~~~~~r~v~l~k~~---~glG~~l~~~~~--~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~ 78 (216)
T 2krg_A 6 TMLRPRLCTMKKGP---SGYGFNLHSDKS--KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIR 78 (216)
T ss_dssp TTCCCEEEEEECCS---SSSCEEECCCSS--SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHH
T ss_pred cccceEEEEEEeCC---CCceEEEEecCC--CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45567999999975 789999988664 35899999999999999999999999999999999888999998866
No 303
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.98 E-value=1.4e-09 Score=114.66 Aligned_cols=82 Identities=29% Similarity=0.553 Sum_probs=69.7
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
++.|+|.|. .+|||.+.++.+. |++|..|.+|+||+++||++||+|++|||+++.++++++++.+|+.
T Consensus 2 ~r~V~l~k~----~~lG~~i~gg~~~---Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~----- 69 (468)
T 3shw_A 2 MKLVKFRKG----DSVGLRLAGGNDV---GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLD----- 69 (468)
T ss_dssp EEEEEEECC----SSCCEEEEEETTT---EEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHH-----
T ss_pred ceEEEEecC----CccceEEEccCcC---CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-----
Confidence 578889885 7899999988764 8999999999999999999999999999999999999999999763
Q ss_pred ceEeecCcEEEEEEECC
Q psy14977 284 GQMLKSNRELSMTVRSP 300 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~ 300 (469)
...+..+.|+|.+.
T Consensus 70 ---~~~g~~v~L~V~r~ 83 (468)
T 3shw_A 70 ---LPKGEEVTILAQKK 83 (468)
T ss_dssp ---SCTTSEEEEEEEEC
T ss_pred ---cCCCCEEEEEEEEC
Confidence 12456666666653
No 304
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.95 E-value=1.4e-09 Score=96.46 Aligned_cols=73 Identities=26% Similarity=0.401 Sum_probs=61.1
Q ss_pred cceEEEEEecCC---CcccEEEecccc------------cCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchH
Q psy14977 367 TVRKVELNIEPG---QSLGLMIRGGVE------------YNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDH 431 (469)
Q Consensus 367 ~~~~V~L~~~~g---~~LGfsi~Gg~e------------~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h 431 (469)
..+.|+|.+... ..|||.+.++.+ ...|++|..|.++|+|+++||++||+|++|||+++.+++ +
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~-~ 101 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVT-H 101 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-H
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCC-H
Confidence 356666644321 289999987654 136999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHh
Q psy14977 432 DKDFDTVIS 440 (469)
Q Consensus 432 ~eav~~Lk~ 440 (469)
++++++|+.
T Consensus 102 ~~~~~~l~~ 110 (139)
T 2vz5_A 102 DQARKRLTK 110 (139)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHHh
Confidence 999999986
No 305
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.95 E-value=3.2e-09 Score=89.98 Aligned_cols=71 Identities=20% Similarity=0.264 Sum_probs=60.5
Q ss_pred eEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCC-CCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGL-LVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGL-r~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.+|+|.+.+..+|||.+.+.. ...+++|..|.++|+|+++|| ++||+|++|||+++.+++ ++++.++|+..
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~-~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~-~~~~~~~l~~~ 74 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERV-SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLS-YDSALEVLRGI 74 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECS-SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSC-HHHHHHHHHHS
T ss_pred EEEEEEcCCCCceeEEEEecC-CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 456665444569999998654 245899999999999999996 999999999999999999 99999999874
No 306
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.95 E-value=2.9e-09 Score=86.61 Aligned_cols=68 Identities=22% Similarity=0.295 Sum_probs=56.1
Q ss_pred eEEEEEecCCC--cccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 369 RKVELNIEPGQ--SLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 369 ~~V~L~~~~g~--~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
+.+.+++.++. .|||.+... ..+++|..|.++++|+++||++||+|++|||+++.+.+ ++++.++|+.
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~---~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~ 74 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWD---IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYND-SKEWEEAMAK 74 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTC-HHHHHHHHHH
T ss_pred eEEEEEecCCCCCcccEEEEec---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCC-HHHHHHHHHh
Confidence 45666655554 899988733 35899999999999999999999999999999997666 8888888874
No 307
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.94 E-value=7.6e-09 Score=84.26 Aligned_cols=79 Identities=23% Similarity=0.475 Sum_probs=62.8
Q ss_pred EEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCccc
Q psy14977 205 RTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYKE 283 (469)
Q Consensus 205 ~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~ 283 (469)
.+|++.+.. ....|||.+. .+++|..|.+++||+++| |+.||+|++|||+++.++++.++..+|+
T Consensus 4 ~~v~~~~~~-~~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~------ 69 (92)
T 3cyy_A 4 TKVTLVKSA-KNEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIE------ 69 (92)
T ss_dssp EEEEEECSS-TTSCCCEEEE-------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHH------
T ss_pred EEEEEEeCC-CCCCCCEEEe-------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH------
Confidence 456666654 3467888775 289999999999999999 9999999999999999999999998865
Q ss_pred ceEeecCcEEEEEEECCC
Q psy14977 284 GQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 284 ~~Ilr~g~~v~l~V~~~~ 301 (469)
..+..+.|+|.|..
T Consensus 70 ----~~~~~v~l~v~r~g 83 (92)
T 3cyy_A 70 ----RSKGKLKMVVQRDE 83 (92)
T ss_dssp ----TTTTEEEEEEEC--
T ss_pred ----cCCCcEEEEEEeCC
Confidence 23457777777654
No 308
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.94 E-value=2.3e-09 Score=110.86 Aligned_cols=83 Identities=29% Similarity=0.548 Sum_probs=70.1
Q ss_pred CeEEEEEecCCCCcceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc
Q psy14977 203 PVRTINMNRSQDANHGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK 282 (469)
Q Consensus 203 ~~~~V~L~r~~~~~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~ 282 (469)
.++.|.+.+. .+|||++.++.+. |++|..|.+||||+++||++||+|++|||+++.++++++++.+|+.
T Consensus 9 ~~~~v~~~k~----~~lG~~i~gg~~~---gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~---- 77 (391)
T 3tsz_A 9 SMKLVKFRKG----DSVGLRLAGGNDV---GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLD---- 77 (391)
T ss_dssp CEEEEEEECC----SSCCEEEEEETTT---EEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHH----
T ss_pred CcEEEEeecC----CceeEEEEecCCC---CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh----
Confidence 3577888886 4799999987754 9999999999999999999999999999999999999999999652
Q ss_pred cceEeecCcEEEEEEECC
Q psy14977 283 EGQMLKSNRELSMTVRSP 300 (469)
Q Consensus 283 ~~~Ilr~g~~v~l~V~~~ 300 (469)
...+..+.|+|.+.
T Consensus 78 ----~~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 78 ----LPKGEEVTILAQKK 91 (391)
T ss_dssp ----SCTTSEEEEEEEEC
T ss_pred ----hcCCCeEEEEEeeC
Confidence 13567777777764
No 309
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.93 E-value=5.3e-09 Score=90.26 Aligned_cols=88 Identities=22% Similarity=0.409 Sum_probs=66.3
Q ss_pred EEEEEec---CCCCcceEEEEEEcCCCCCCCcEEEEEeCC--CCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhc
Q psy14977 205 RTINMNR---SQDANHGFGICVKGGANNPGVGVYISRVEE--GSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFE 279 (469)
Q Consensus 205 ~~V~L~r---~~~~~~GlGf~i~gg~~~~~~gi~V~~V~p--gspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~ 279 (469)
++|+|.+ ......||+|.+.........+++|..|.+ ++||+++||+.||+|++|||+++.++++.++...|+
T Consensus 14 ~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~-- 91 (118)
T 2yub_A 14 YSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIK-- 91 (118)
T ss_dssp CEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHH--
T ss_pred ceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHH--
Confidence 4555555 322234666665543211146899999999 999999999999999999999999999999988865
Q ss_pred CcccceEeecCcEEEEEEECCCC
Q psy14977 280 GYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 280 ~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
.. +..+.|+|.|...
T Consensus 92 -------~~-g~~v~l~v~R~g~ 106 (118)
T 2yub_A 92 -------QT-SQTLQLLIEHDPV 106 (118)
T ss_dssp -------CC-SSCEEEEEEECSS
T ss_pred -------hC-CCEEEEEEEECCE
Confidence 23 7788899888655
No 310
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=4.4e-09 Score=91.16 Aligned_cols=87 Identities=29% Similarity=0.600 Sum_probs=66.7
Q ss_pred eEEEEEecCCCCcceEEEEEEcCCCC-CCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCc
Q psy14977 204 VRTINMNRSQDANHGFGICVKGGANN-PGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGY 281 (469)
Q Consensus 204 ~~~V~L~r~~~~~~GlGf~i~gg~~~-~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~ 281 (469)
.+.+.+.+.. .+.+|||++....+. ...+++|..|.+++||+++| |++||+|++|||++|.+ +.++..+|+
T Consensus 20 ~~~~~~~~~~-~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~---- 92 (124)
T 1wh1_A 20 LEEVDLYRMN-SQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLT---- 92 (124)
T ss_dssp ECCBCCCCSS-TTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHT----
T ss_pred EEEEEEEecC-CCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHH----
Confidence 3445565653 346899999876531 12589999999999999999 99999999999999985 678888865
Q ss_pred ccceEeecCcEEEEEEECCCC
Q psy14977 282 KEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 282 ~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
...+..+.|+|.|...
T Consensus 93 -----~~~g~~v~l~v~R~g~ 108 (124)
T 1wh1_A 93 -----SEENKNFSLLIARPEL 108 (124)
T ss_dssp -----CSSCCSCCEEEEECSS
T ss_pred -----hCCCCEEEEEEEECCE
Confidence 2336778888887654
No 311
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.92 E-value=4.6e-09 Score=91.12 Aligned_cols=72 Identities=19% Similarity=0.137 Sum_probs=61.0
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
.+.+.|... ..+|||.+.++.+ ..+++|..|.++|+|+++||++||+|++|||+++.+++ ++++.++|+...
T Consensus 10 ~r~v~l~~~-~~g~G~~l~~~~~-~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~ 81 (128)
T 2kjd_A 10 PRLCTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQ-HGDVVSAIRAGG 81 (128)
T ss_dssp CEEEEEECC-SSSCCEEEEECSS-SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC-HHHHHHHHHTTC
T ss_pred cEEEEEecC-CCcccEEEEecCC-CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCC
Confidence 456666433 3589999987653 34999999999999999999999999999999999999 999999998763
No 312
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=4.9e-10 Score=97.46 Aligned_cols=74 Identities=16% Similarity=0.112 Sum_probs=60.8
Q ss_pred ceEEEEEecCCCcccEEEecccc----------------------------cCCcEEEEEecCCCHHHHcCCCCCcEEEE
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVE----------------------------YNLGIFITGVDKDSVAERAGLLVSQLTLY 419 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e----------------------------~~~GI~V~~V~pgs~A~~aGLr~GD~IL~ 419 (469)
.+.|+|.+. ..+|||.+.+... ...+++|..|.++++|+++||++||+|++
T Consensus 9 ~r~v~l~r~-~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ 87 (126)
T 2yuy_A 9 PKTVTLKRT-SQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRIIK 87 (126)
T ss_dssp CCCEEEECC-SSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCCCE
T ss_pred CEEEEEEEC-CCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEEEE
Confidence 466777543 3589999975211 12469999999999999999999999999
Q ss_pred EecEEecCcchHHHHHHHHHhCCC
Q psy14977 420 QFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 420 VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
|||+++.+++ +++++++|+..++
T Consensus 88 ing~~v~~~~-~~~~~~~l~~~g~ 110 (126)
T 2yuy_A 88 VNGESVIGKT-YSQVIALIQNSDT 110 (126)
T ss_dssp ETTEECSSCC-HHHHHHHHHTCTT
T ss_pred ECCEECCCCC-HHHHHHHHHcCCC
Confidence 9999999999 9999999998654
No 313
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.91 E-value=1.5e-09 Score=100.63 Aligned_cols=63 Identities=25% Similarity=0.377 Sum_probs=57.8
Q ss_pred CcccEEEecccc--------cCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 379 QSLGLMIRGGVE--------YNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 379 ~~LGfsi~Gg~e--------~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+|||+|.|+.+ ...|++|..|.++++|++ ||++||+|++|||+++.+++ |.+++.+++..+.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~~ 72 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIE-HGQAVSLLKTFQN 72 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCC-HHHHHHHHHHCCS
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 479999999763 246999999999999999 99999999999999999999 9999999998876
No 314
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.90 E-value=1.2e-08 Score=80.85 Aligned_cols=68 Identities=25% Similarity=0.510 Sum_probs=57.0
Q ss_pred cceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEE
Q psy14977 216 NHGFGICVKGGANNPGVGVYISRVEEGSIAERAG-LRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELS 294 (469)
Q Consensus 216 ~~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aG-L~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~ 294 (469)
...|||.+. .+++|..|.+++||+++| |+.||+|++|||+++.++++.++..+|+ .....+.
T Consensus 12 ~~~~g~~~~-------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~----------~~~~~v~ 74 (81)
T 2rcz_A 12 NEEYGLRLA-------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIE----------RSKGKLK 74 (81)
T ss_dssp TCCCCEEEE-------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHH----------TSTTEEE
T ss_pred CCCCCEEEe-------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH----------CCCCeEE
Confidence 467888776 279999999999999999 9999999999999999999999998865 2345778
Q ss_pred EEEECC
Q psy14977 295 MTVRSP 300 (469)
Q Consensus 295 l~V~~~ 300 (469)
|+|.|.
T Consensus 75 l~v~R~ 80 (81)
T 2rcz_A 75 MVVQRD 80 (81)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 887663
No 315
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.90 E-value=1.6e-09 Score=111.97 Aligned_cols=70 Identities=27% Similarity=0.426 Sum_probs=61.2
Q ss_pred eEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh--CCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS--FSH 443 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~--~g~ 443 (469)
+.|.+ .++.+|||++.++.+ .|++|..|.+||+|+++||++||+|++|||+++.+++ +++++.+|+. .++
T Consensus 11 ~~v~~--~k~~~lG~~i~gg~~--~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~-~~e~~~~l~~~~~g~ 82 (391)
T 3tsz_A 11 KLVKF--RKGDSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNII-REEAVLFLLDLPKGE 82 (391)
T ss_dssp EEEEE--ECCSSCCEEEEEETT--TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCC-HHHHHHHHHHSCTTS
T ss_pred EEEEe--ecCCceeEEEEecCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhhcCCC
Confidence 44444 556689999998764 7999999999999999999999999999999999999 9999999995 554
No 316
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.90 E-value=2.8e-09 Score=86.42 Aligned_cols=68 Identities=19% Similarity=0.210 Sum_probs=53.9
Q ss_pred ceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 368 VRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 368 ~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.+.|+|.+. ..+|||.+.+..+ ..+++|..| ++++|+ +||++||+|++|||+++.+++ +++++++|+.
T Consensus 4 ~~~v~l~k~-~~g~G~~~~~~~~-~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~-~~~~~~~l~~ 71 (88)
T 3bpu_A 4 LITVHIVKG-PMGFGFTIADSPG-GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALT-HNQVVDMLVE 71 (88)
T ss_dssp EEEEEEECB-TTBSSCEEEECTT-SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSC-HHHHHHHHHT
T ss_pred EEEEEEEcC-CCceeEEEEecCC-CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCC-HHHHHHHHHh
Confidence 345555332 2599999986532 358899887 999999 999999999999999999999 9999999985
No 317
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=5.5e-10 Score=92.55 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=59.3
Q ss_pred ceEEEEEecCCC-cccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 368 VRKVELNIEPGQ-SLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 368 ~~~V~L~~~~g~-~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
.+.|+|.+.... +|||.+.+ ..+++|..|.++++|+ +||++||+|++|||+++.+++ +.+++.+++..++
T Consensus 9 ~~~v~l~~~~~~~~~G~~l~~----~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~-~~~~~~~~~~~g~ 79 (96)
T 2edv_A 9 RHTVKIDKDTLLQDYGFHISE----SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLS-WERAVDILREAED 79 (96)
T ss_dssp EEEEEECCCSSSCSCSBCCCS----SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCC-HHHHHHHHHHCSS
T ss_pred cEEEEEEECCCCCcccEEEec----CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 466666555433 89999885 3589999999999996 889999999999999999999 9999999997655
No 318
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.88 E-value=1.3e-09 Score=114.81 Aligned_cols=67 Identities=28% Similarity=0.457 Sum_probs=60.6
Q ss_pred eEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
+.|.+ .++.+|||.+.++.+ .||||..|.+||+|+++||++||+|++|||++|.+++ +++++.+|+.
T Consensus 3 r~V~l--~k~~~lG~~i~gg~~--~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t-~~e~~~~L~~ 69 (468)
T 3shw_A 3 KLVKF--RKGDSVGLRLAGGND--VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNII-REEAVLFLLD 69 (468)
T ss_dssp EEEEE--ECCSSCCEEEEEETT--TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCC-HHHHHHHHHH
T ss_pred eEEEE--ecCCccceEEEccCc--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHh
Confidence 44555 556899999998864 7999999999999999999999999999999999999 9999999998
No 319
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=4e-09 Score=87.39 Aligned_cols=66 Identities=18% Similarity=0.182 Sum_probs=54.7
Q ss_pred ceEEEEEecCC-CcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 368 VRKVELNIEPG-QSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 368 ~~~V~L~~~~g-~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
...+.| .++ .+|||.+.... .|++|..|.++ |+++||++||+|++|||+++.+++ |++++++|+..
T Consensus 11 ~~~v~l--~~~~~g~G~~i~~~~---~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~-~~~~~~~l~~~ 77 (96)
T 1ujv_A 11 LMTLTI--VKGAQGFGFTIADSP---TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLS-HTEVVDILKDC 77 (96)
T ss_dssp CEEEEE--ECCSSSSSEEEEEET---TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCC-HHHHHHHHHHS
T ss_pred EEEEEE--EeCCCceeEEEEcCC---CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcC
Confidence 344555 444 59999997433 48999999984 778899999999999999999999 99999999985
No 320
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.86 E-value=9.3e-09 Score=81.40 Aligned_cols=60 Identities=18% Similarity=0.178 Sum_probs=53.2
Q ss_pred cCCCcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 376 EPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 376 ~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
+....|||.+. .|++|..|.++++|+++| |++||+|++|||+++.+++ ++++.++|+...
T Consensus 10 ~~~~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~ 70 (81)
T 2rcz_A 10 RKNEEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMS-LTDAKTLIERSK 70 (81)
T ss_dssp STTCCCCEEEE------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCC-HHHHHHHHHTST
T ss_pred CCCCCCCEEEe------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCC-HHHHHHHHHCCC
Confidence 34458898876 478999999999999999 9999999999999999888 999999998754
No 321
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.85 E-value=1.4e-09 Score=92.85 Aligned_cols=69 Identities=17% Similarity=0.200 Sum_probs=58.3
Q ss_pred eEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 369 RKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 369 ~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
+.|.|.+ ...+|||.+.+. .+++|..|.++++|+++||++||+|++|||+++.+++ +++++++|+....
T Consensus 17 r~v~l~~-~~~~~G~~l~~~----~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~-~~d~~~~i~~~~~ 85 (111)
T 1vae_A 17 RGIHFTV-EEGDLGFTLRGN----TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLT-VSEVMKLLKSFGG 85 (111)
T ss_dssp CCCCEEC-CSSCCSCCEESS----SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCC-HHHHHHHHHHTTT
T ss_pred eEEEEEc-CCCcccEEEeCC----CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhCCC
Confidence 4555643 346999988744 4789999999999999999999999999999999888 9999999987654
No 322
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.85 E-value=4.4e-09 Score=97.94 Aligned_cols=74 Identities=19% Similarity=0.191 Sum_probs=64.3
Q ss_pred cceEEEEEecCCCcccEEEecccc----cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVE----YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e----~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
+.++|+|.+....+|||.+.++.+ ...+++|..|.++++|+++| |++||+|++|||+++.+++ ++++.++|+..
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~l~~~ 84 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDST-FEEANQLLRDS 84 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSC-HHHHHHHHHTC
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 356677766656799999998753 24689999999999999999 9999999999999999988 99999999876
No 323
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.82 E-value=1.9e-09 Score=94.33 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=57.2
Q ss_pred eEEEEEecCC-CcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 369 RKVELNIEPG-QSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 369 ~~V~L~~~~g-~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.| .++ .+|||.+.+. ..+++|..|.+++||+++| |++||+|++|||+++.+.+ |++++++|+..
T Consensus 29 ~~~~l--~k~~~glG~~i~~~---~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s-~~d~~~~l~~~ 97 (126)
T 1wif_A 29 IQTKL--TVGNLGLGLVVIQN---GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYT-LREFLKLLQNI 97 (126)
T ss_dssp EEEEE--ECCTTCCCCCEEEE---TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCC-HHHHHHHHTSC
T ss_pred EEEEE--ecCCceEeEEEEcC---CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCC-HHHHHHHHhcC
Confidence 44444 443 4999998853 3589999999999999999 9999999999999999889 99999999873
No 324
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.82 E-value=1.6e-08 Score=82.23 Aligned_cols=58 Identities=19% Similarity=0.175 Sum_probs=52.6
Q ss_pred CcccEEEecccccCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 379 QSLGLMIRGGVEYNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 379 ~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..|||.+. .|++|..|.++|+|+++| |++||+|++|||+++.+++ ++++.++|+..++
T Consensus 15 ~~~g~~~~------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~-~~~~~~~l~~~~~ 73 (92)
T 3cyy_A 15 EEYGLRLA------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMS-LTDAKTLIERSKG 73 (92)
T ss_dssp SCCCEEEE------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCC-HHHHHHHHHTTTT
T ss_pred CCCCEEEe------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHcCCC
Confidence 48898876 489999999999999999 9999999999999999888 9999999987544
No 325
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.80 E-value=3.5e-09 Score=91.91 Aligned_cols=73 Identities=21% Similarity=0.284 Sum_probs=62.2
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCC-CCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGL-LVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGL-r~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..+.|+|......+|||.+.+..+ ..+++|..|.++++|+++|| ++||+|++|||+++.+++ +++++++|+..
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~-~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~-~~~~~~~l~~~ 81 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVS-KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLS-YDSALEVLRGI 81 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTT-SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSC-HHHHHHHHHSC
T ss_pred ceEEEEEEeCCCCcEeEEEEecCC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC
Confidence 456777755544699999986542 35899999999999999996 999999999999999999 99999999874
No 326
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.79 E-value=1.8e-08 Score=91.30 Aligned_cols=72 Identities=24% Similarity=0.200 Sum_probs=61.1
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
..+.|.|.+.....|||.+... ..|++|..|.++|+|+++||++||+|++|||+++.+++ ++.+..+++...
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~---~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~-~~~~~~~~~~~~ 75 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI---DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWS-SDKAHKVLKQAF 75 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE---TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC-HHHHHHHHHHCC
T ss_pred CCEEEEEEeCCCCcEeEEEEeC---CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHhcCC
Confidence 3577888766667999999854 36899999999999999999999999999999999999 767777777543
No 327
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.77 E-value=1.7e-08 Score=84.69 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=52.5
Q ss_pred CCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 377 PGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 377 ~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
...++||.+... +.+.+|.+|.++|||+++||++||+|++|||+++...+ ++++...++.
T Consensus 26 ~~~g~G~~l~~~---~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s-~~dv~~~i~~ 85 (101)
T 3qik_A 26 QEEDYGFDIEEK---NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRP-FSEVESILNQ 85 (101)
T ss_dssp CSSSSSEEEEEE---TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSC-HHHHHHHHHH
T ss_pred CCCcccEEEEcc---CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCC-HHHHHHHHHH
Confidence 345899998743 35789999999999999999999999999999998777 8999999876
No 328
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.66 E-value=7.8e-09 Score=106.69 Aligned_cols=76 Identities=12% Similarity=0.156 Sum_probs=65.0
Q ss_pred CcceEEEEEecCCCcccEEEecccc--cCCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhCC
Q psy14977 366 DTVRKVELNIEPGQSLGLMIRGGVE--YNLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISFS 442 (469)
Q Consensus 366 ~~~~~V~L~~~~g~~LGfsi~Gg~e--~~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g 442 (469)
+..+.|+|.+.++.+|||.|.+... ...+++|..|.++|+|+++| |++||+|++|||+++.+++ |++++++|+..+
T Consensus 203 ~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~-~~~~~~~l~~~~ 281 (388)
T 3suz_A 203 ENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLP-LATCQGIIKGLK 281 (388)
T ss_dssp SCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCC-STTHHHHTTTCT
T ss_pred ccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCC-HHHHHHHHHhcc
Confidence 4568888887778899999987432 23469999999999999999 9999999999999999999 999999998863
No 329
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.66 E-value=2.1e-08 Score=95.45 Aligned_cols=74 Identities=19% Similarity=0.134 Sum_probs=61.6
Q ss_pred cceEEEEEecCCCcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 367 TVRKVELNIEPGQSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 367 ~~~~V~L~~~~g~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+.|.|.+. ..+|||.+.++.+ ..|++|..|.++++|+++||++||+|++|||++|.+++ +++++++|+..++
T Consensus 9 ~~r~v~l~k~-~~glG~~l~~~~~-~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s-~~dl~~~l~~~g~ 82 (216)
T 2krg_A 9 RPRLCTMKKG-PSGYGFNLHSDKS-KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQ-HGDVVSAIRAGGD 82 (216)
T ss_dssp CCEEEEEECC-SSSSCEEECCCSS-SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCC-THHHHHHHHHHCS
T ss_pred ceEEEEEEeC-CCCceEEEEecCC-CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhcCC
Confidence 3466666433 2489999987652 34899999999999999999999999999999999888 9999999987554
No 330
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.65 E-value=1.8e-08 Score=86.87 Aligned_cols=64 Identities=14% Similarity=0.067 Sum_probs=52.4
Q ss_pred CcccEEEeccc---ccCCcEEEEEecC--CCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhCCC
Q psy14977 379 QSLGLMIRGGV---EYNLGIFITGVDK--DSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISFSH 443 (469)
Q Consensus 379 ~~LGfsi~Gg~---e~~~GI~V~~V~p--gs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~g~ 443 (469)
..+||.+.... +...+++|..|.+ +++|+++||++||+|++|||+++.+++ |+++.++|+..++
T Consensus 27 g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~-~~dl~~~l~~~g~ 95 (118)
T 2yub_A 27 CRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLR-VEEVEDAIKQTSQ 95 (118)
T ss_dssp SSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSC-HHHHHHHHHCCSS
T ss_pred CCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcC-HHHHHHHHHhCCC
Confidence 34566555221 2346899999999 999999999999999999999999998 8999999987643
No 331
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=4.1e-08 Score=84.97 Aligned_cols=60 Identities=20% Similarity=0.282 Sum_probs=51.8
Q ss_pred CcccEEEeccccc--CCcEEEEEecCCCHHHHcC-CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 379 QSLGLMIRGGVEY--NLGIFITGVDKDSVAERAG-LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 379 ~~LGfsi~Gg~e~--~~GI~V~~V~pgs~A~~aG-Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..|||.+...... ..+++|..|.++++|+++| |++||+|++|||+++.+ ++++.++|+..
T Consensus 32 ~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~---~~~~~~~l~~~ 94 (124)
T 1wh1_A 32 DKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN---REEAVALLTSE 94 (124)
T ss_dssp CCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS---HHHHHHHHTCS
T ss_pred CcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---HHHHHHHHHhC
Confidence 3899999865421 3589999999999999999 99999999999999986 67999999874
No 332
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.56 E-value=4.8e-08 Score=100.65 Aligned_cols=105 Identities=24% Similarity=0.320 Sum_probs=76.3
Q ss_pred CCCCCCCCcccCCCCCeEEEEEecCCCCcceEEEEEEcC-CCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCC
Q psy14977 188 HPRHRRLTPPDIDQLPVRTINMNRSQDANHGFGICVKGG-ANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTG 266 (469)
Q Consensus 188 ~p~~~~~~~~~~~~~~~~~V~L~r~~~~~~GlGf~i~gg-~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~ 266 (469)
|||+.|+.+.++..+.... .+...|+|+.+... .+ ..+++|..|.+++||+++||+.||+|++|||+++.+
T Consensus 62 D~hs~~~~~~~~~~~~~~~------~g~~~giG~~~~~~~~~--~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~ 133 (388)
T 1fc6_A 62 DPFTRFLEPSRLAALRRGT------AGSVTGVGLEITYDGGS--GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKG 133 (388)
T ss_dssp CTTCEEECHHHHHHHHHCS------SSSCBBCSEEEEECTTC--SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTT
T ss_pred CCcceecCHHHHHHHHHhh------cCceEEEEEEEEEeecC--CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCC
Confidence 8899888766554332211 23457899988754 21 248999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhhcCcc--cceEeecCc---EEEEEEECC
Q psy14977 267 ISHEEALKMCFFEGYK--EGQMLKSNR---ELSMTVRSP 300 (469)
Q Consensus 267 ~s~~~av~~ir~~~~~--~~~Ilr~g~---~v~l~V~~~ 300 (469)
++..++..+|+..... .++|.|.+. ...+++.+.
T Consensus 134 ~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 134 MSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp CCHHHHHHHHCBSTTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred CCHHHHHHHHhcCCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 9888888887632222 355666655 455666554
No 333
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.47 E-value=3e-07 Score=74.49 Aligned_cols=44 Identities=23% Similarity=0.336 Sum_probs=36.6
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
.|+.|..+.|++||+++||+.||+|++|||+++.++ .++...++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~--~d~~~~~~ 62 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDP--NVMNTLFQ 62 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCH--HHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCH--HHHHHHHH
Confidence 377888889999999999999999999999999876 44444443
No 334
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.42 E-value=9.6e-07 Score=74.71 Aligned_cols=67 Identities=31% Similarity=0.398 Sum_probs=51.7
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEEC
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~ 299 (469)
..+++|..|.+++||+++||++||+|++|||+++.+ ..++...|+......++|.|++....+.+..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~~v~l~v~R~g~~~~~~v~~ 100 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRTQSQLAVQIRRGRETLTLYVTP 100 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHHHCSSEEEEEEETTEEEEEEECC
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhCCCeEEEEEEECCEEEEEEEEE
Confidence 358999999999999999999999999999999985 4677777664323346666666665555543
No 335
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.38 E-value=1.1e-06 Score=74.20 Aligned_cols=66 Identities=26% Similarity=0.449 Sum_probs=50.3
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEE
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~ 298 (469)
..+++|..|.+++||+++||+.||+|++|||+++.++ .++...++......+++.|++....+.+.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~g~~v~l~v~R~g~~~~~~v~ 99 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS--SELQEAVLTESPLLLEVRRGNDDLLFSIA 99 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHHCSSEEEEEEETTEEEEEEEC
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHhCCCeEEEEEEECCEEEEEEEE
Confidence 3589999999999999999999999999999999864 66666654322334666666665555553
No 336
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.33 E-value=1.9e-06 Score=72.20 Aligned_cols=37 Identities=27% Similarity=0.420 Sum_probs=33.6
Q ss_pred cEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCH
Q psy14977 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISH 269 (469)
Q Consensus 233 gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~ 269 (469)
+++|..+.|+++|+++||+.||+|++|||+++.++..
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d 74 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNV 74 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTH
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHH
Confidence 6778888888999999999999999999999998865
No 337
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.32 E-value=8.3e-07 Score=73.78 Aligned_cols=44 Identities=27% Similarity=0.407 Sum_probs=37.5
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
..|++|..|.+++||++ ||+.||+|++|||+++.++ .++...|.
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~--~dl~~~l~ 49 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSS--QEFIDYIH 49 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSH--HHHHHHHH
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCH--HHHHHHHH
Confidence 35899999999999995 9999999999999999865 55555554
No 338
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.31 E-value=1.3e-06 Score=76.75 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=49.2
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhc--C-cccceEeecCcEEEEEEEC
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFE--G-YKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~--~-~~~~~Ilr~g~~v~l~V~~ 299 (469)
..+++|..|.+++||+ +||+.||+|++|||+++.++ .++...|+.. + ...++|.|++...++.+..
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 124 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGKEETTSIKL 124 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTEEEEEEEEC
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 3589999999999999 99999999999999999876 5555555432 1 1235666666665555544
No 339
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.27 E-value=1.3e-06 Score=71.98 Aligned_cols=58 Identities=19% Similarity=0.229 Sum_probs=45.3
Q ss_pred EEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCC
Q psy14977 234 VYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 234 i~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
-+|..|.+++||+++||+.||+|++|||+++.++ .++...|.. ...++.+.++|.|..
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~d~~~~l~~--------~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDW--DAVRLQLVD--------KIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSH--HHHHHHHHH--------TTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHH--------hcCCCcEEEEEEECC
Confidence 3688999999999999999999999999999866 556555431 122367888887764
No 340
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.24 E-value=1.7e-06 Score=70.09 Aligned_cols=63 Identities=25% Similarity=0.314 Sum_probs=45.1
Q ss_pred cEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcC--cccceEeecCcEEEEEE
Q psy14977 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEG--YKEGQMLKSNRELSMTV 297 (469)
Q Consensus 233 gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~--~~~~~Ilr~g~~v~l~V 297 (469)
.++|..|.+++||+++||+.||+|++|||+++.++ .++...++... ...+++.|++....+.+
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g~~~~~~v 69 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQGSPLSLTL 69 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETTEEEEEEE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECCeEEEEEE
Confidence 46788999999999999999999999999999865 66666655321 11345555554444444
No 341
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.21 E-value=6.4e-07 Score=72.49 Aligned_cols=45 Identities=13% Similarity=-0.024 Sum_probs=37.8
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.|+.|..+.++++|+++||++||+|++|||+++.++. ++.++++.
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~---d~~~~~~~ 63 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPN---VMNTLFQS 63 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHH---HHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHH---HHHHHHHh
Confidence 3778888999999999999999999999999999866 55555543
No 342
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.18 E-value=9.9e-07 Score=72.60 Aligned_cols=65 Identities=20% Similarity=0.294 Sum_probs=48.6
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhc--C-cccceEeecCcEEEEEEEC
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFE--G-YKEGQMLKSNRELSMTVRS 299 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~--~-~~~~~Ilr~g~~v~l~V~~ 299 (469)
.+++|..|.+++||++ ||+.||+|++|||+++.++ .++...|+.. + ...++|.|++....+.+..
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 4799999999999999 9999999999999999865 5666666543 1 2235666666655555543
No 343
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.16 E-value=4.7e-07 Score=74.31 Aligned_cols=59 Identities=20% Similarity=0.356 Sum_probs=46.6
Q ss_pred cEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCCC
Q psy14977 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPSI 302 (469)
Q Consensus 233 gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~~ 302 (469)
|++|..|.+++||++ ||++||+|++|||+++.++ .++...|+. .+.+..+.|+|.|...
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~--~~l~~~l~~--------~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSA--EKLIDYISS--------KKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSH--HHHHHHHSS--------CCSSCEECEEEESSSC
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCH--HHHHHHHHc--------CCCCCEEEEEEEECCE
Confidence 678899999999999 9999999999999999864 667777542 1236677777777543
No 344
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.12 E-value=6.7e-06 Score=89.28 Aligned_cols=80 Identities=19% Similarity=0.228 Sum_probs=55.0
Q ss_pred ceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEE
Q psy14977 217 HGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMT 296 (469)
Q Consensus 217 ~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~ 296 (469)
.++|+.+.... .+++|..|.+++||+++||++||+|++|||++|......+++...+......++|.|+++.+.+.
T Consensus 485 ~~lG~~~~~~~----~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 560 (597)
T 4fgm_A 485 VNFGAKYKASP----QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATEQSVKRILERYIPGDTVTIHAFRRDELMTLE 560 (597)
T ss_dssp CCCSEEEEEET----TEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCTTTHHHHHTTCCTTCEEEEEEEETTEEEEEE
T ss_pred cccceEEeccC----CeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 47888876533 37999999999999999999999999999999953333444433221112235556666655555
Q ss_pred EECC
Q psy14977 297 VRSP 300 (469)
Q Consensus 297 V~~~ 300 (469)
|...
T Consensus 561 v~l~ 564 (597)
T 4fgm_A 561 LTWQ 564 (597)
T ss_dssp EECC
T ss_pred EEec
Confidence 5443
No 345
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.11 E-value=3.7e-06 Score=71.05 Aligned_cols=46 Identities=24% Similarity=0.203 Sum_probs=41.4
Q ss_pred CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 392 NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 392 ~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..|++|..|.++|+|+++||++||+|++|||+++.+ .+++..+|+.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~l~~ 79 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN---AEDVYEAVRT 79 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCS---HHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC---HHHHHHHHhC
Confidence 368999999999999999999999999999999986 5578788876
No 346
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.06 E-value=4.8e-06 Score=68.63 Aligned_cols=43 Identities=9% Similarity=-0.137 Sum_probs=37.3
Q ss_pred EEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 395 IFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 395 I~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.+|..|.++|+|+++||++||+|++|||+.+.++. ++.+.|..
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~---d~~~~l~~ 46 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWD---AVRLQLVD 46 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHH---HHHHHHHH
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHH---HHHHHHHH
Confidence 36889999999999999999999999999999855 66666654
No 347
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.06 E-value=7.3e-06 Score=84.87 Aligned_cols=59 Identities=31% Similarity=0.305 Sum_probs=47.3
Q ss_pred cceEEEEEEcCCCCC-CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 216 NHGFGICVKGGANNP-GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 216 ~~GlGf~i~gg~~~~-~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
..||||.+....+.. ...++|..|.+++||+++||+.||+|++|||+++.++. +..+|+
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~ 132 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQ 132 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTS
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhh
Confidence 478999987654320 12478999999999999999999999999999999884 455554
No 348
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.05 E-value=4.5e-06 Score=78.53 Aligned_cols=52 Identities=15% Similarity=-0.026 Sum_probs=40.6
Q ss_pred ccEEEecccccCCcEEEEEecCCCHHHHcCCCCC-cEEEEEecEEecCcchHH
Q psy14977 381 LGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVS-QLTLYQFIKEFLILSDHD 432 (469)
Q Consensus 381 LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~G-D~IL~VNG~sv~~~s~h~ 432 (469)
++++...+.....|++|..|.++|||+++||++| |+|++|||+++.++.+..
T Consensus 4 ~~~~~~~~~~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~ 56 (209)
T 3rle_A 4 SSQSVEIPGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTL 56 (209)
T ss_dssp ----CCCTTSSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHH
T ss_pred hhhhhhccCCCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHH
Confidence 4444444444456899999999999999999999 999999999999988433
No 349
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.03 E-value=7.3e-06 Score=69.15 Aligned_cols=47 Identities=15% Similarity=0.223 Sum_probs=40.7
Q ss_pred CCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 392 NLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 392 ~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..|++|..|.++++|+++||++||+|++|||+++.++ .++...|+..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~---~~~~~~l~~g 80 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS---SELQEAVLTE 80 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH---HHHHHHHHHC
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH---HHHHHHHhCC
Confidence 3589999999999999999999999999999999874 4677666543
No 350
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.02 E-value=8.5e-06 Score=81.56 Aligned_cols=57 Identities=21% Similarity=0.353 Sum_probs=45.3
Q ss_pred ceEEEEEEcCCCCCCCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 217 HGFGICVKGGANNPGVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 217 ~GlGf~i~gg~~~~~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
..+|+.+..... ..+++|..|.+++||+++||+.||+|++|||+++.++ .++...|+
T Consensus 229 ~~lGi~~~~~~~--~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~l~~~l~ 285 (324)
T 1y8t_A 229 ASLGVQVTNDKD--TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSA--DALVAAVR 285 (324)
T ss_dssp EECCEEEESCSS--SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSH--HHHHHHHH
T ss_pred cccceEeeeccC--CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHH
Confidence 456777654321 4589999999999999999999999999999999875 55555543
No 351
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.02 E-value=1.1e-05 Score=80.99 Aligned_cols=65 Identities=32% Similarity=0.413 Sum_probs=51.2
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEE
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVR 298 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~ 298 (469)
.|++|..|.+++||+++||+.||+|++|||+++.++ .++.+.|+......++|.|+++.+.+.+.
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~--~~l~~~l~~~~~v~l~v~R~g~~~~~~v~ 320 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRTQSQLAVQIRRGRETLTLYVT 320 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHTTCSSEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHhCCCeEEEEEEECCEEEEEEEE
Confidence 589999999999999999999999999999999864 67777765433334666666666655553
No 352
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.02 E-value=7.2e-06 Score=83.18 Aligned_cols=65 Identities=28% Similarity=0.436 Sum_probs=48.9
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhc--C-cccceEeecCcEEEEEEE
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFE--G-YKEGQMLKSNRELSMTVR 298 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~--~-~~~~~Ilr~g~~v~l~V~ 298 (469)
.|++|..|.+++||+++||+.||+|++|||+++.++ .++...|+.. + ...++|+|+++...+.|.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 330 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKPLEVEVT 330 (345)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCH--HHHHHHHHTSCTTCEEEEEEEETTEEEEEEEE
T ss_pred ceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 689999999999999999999999999999999865 5666665432 1 123555666655555544
No 353
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.02 E-value=4.9e-06 Score=69.68 Aligned_cols=47 Identities=13% Similarity=0.055 Sum_probs=38.5
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHH
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVI 439 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk 439 (469)
.|++|..+.|+++|+++||++||+|++|||+++.++.|..+++..++
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~ 83 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMN 83 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHT
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcC
Confidence 36778888888999999999999999999999999884555444443
No 354
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.00 E-value=4e-06 Score=67.92 Aligned_cols=46 Identities=15% Similarity=0.006 Sum_probs=38.5
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
..++|..|.++++|+++||++||+|++|||+++.++ +++...|+..
T Consensus 4 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~---~~~~~~l~~~ 49 (91)
T 2zpm_A 4 IEPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQW---VTFVMLVRDN 49 (91)
T ss_dssp --CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCH---HHHHHHHHHC
T ss_pred cCeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCH---HHHHHHHhcC
Confidence 346788999999999999999999999999999874 4777777653
No 355
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.00 E-value=6.3e-06 Score=72.24 Aligned_cols=45 Identities=13% Similarity=0.042 Sum_probs=39.5
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.|++|..|.++|+|+ +||++||+|++|||+++.++. ++..+|+..
T Consensus 57 ~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~---~l~~~l~~~ 101 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASST---DLQSALYNH 101 (134)
T ss_dssp SCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHH---HHHHHHHHS
T ss_pred CCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHH---HHHHHHHhC
Confidence 589999999999999 999999999999999999855 666666653
No 356
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.99 E-value=4.8e-06 Score=69.12 Aligned_cols=44 Identities=20% Similarity=0.126 Sum_probs=38.7
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.|++|..|.+++||++ ||++||+|++|||+++.++. ++.++|..
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~---dl~~~l~~ 50 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQ---EFIDYIHS 50 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHH---HHHHHHHT
T ss_pred CCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHH---HHHHHHHh
Confidence 5899999999999995 99999999999999998855 66677765
No 357
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.92 E-value=1.1e-06 Score=71.95 Aligned_cols=44 Identities=20% Similarity=0.181 Sum_probs=39.0
Q ss_pred cEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 394 GIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 394 GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
|++|..|.++|||++ ||++||+|++|||+++.+ .+++..+|+..
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~---~~~l~~~l~~~ 45 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQS---AEKLIDYISSK 45 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSS---HHHHHHHHSSC
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCC---HHHHHHHHHcC
Confidence 678899999999999 999999999999999987 45888888765
No 358
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.92 E-value=1.3e-05 Score=69.65 Aligned_cols=56 Identities=27% Similarity=0.347 Sum_probs=43.6
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEE
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTV 297 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V 297 (469)
..+++|..|.+++||+++ |+.||+|++|||+++.++ .++...++. .+.++.+.|+|
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~--~dl~~~l~~--------~~~g~~v~l~V 79 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNL--TTYSAALKT--------ISVGEVINITT 79 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSH--HHHHHHHTT--------CCTTCEEEEEE
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCH--HHHHHHHHh--------cCCCCEEEEEE
Confidence 348999999999999999 999999999999999866 555555431 13355666666
No 359
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.87 E-value=4.1e-06 Score=68.85 Aligned_cols=45 Identities=11% Similarity=-0.052 Sum_probs=39.5
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.|++|..|.++|+|++ ||++||+|++|||+++.++ +++.++|+..
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~---~~l~~~l~~~ 49 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTS---EQIVSYVREK 49 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCH---HHHHHHHHHS
T ss_pred CcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCH---HHHHHHHHhC
Confidence 5889999999999998 9999999999999999875 4777777664
No 360
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.86 E-value=2.1e-05 Score=80.78 Aligned_cols=60 Identities=15% Similarity=0.012 Sum_probs=51.3
Q ss_pred cccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 380 SLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 380 ~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
++|+.+........+++|..|.+++||+++||++||+|++|||+++.+++ .++++++|+.
T Consensus 86 giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~-~~~~~~~l~~ 145 (388)
T 1fc6_A 86 GVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMS-LYDVSDLLQG 145 (388)
T ss_dssp BCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC-HHHHHHHHCB
T ss_pred EEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCC-HHHHHHHHhc
Confidence 78888763211135899999999999999999999999999999999998 8899999874
No 361
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.85 E-value=1.4e-05 Score=79.77 Aligned_cols=45 Identities=22% Similarity=0.312 Sum_probs=39.4
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
..+++|..|.+++||+++||+.||+|++|||+++.++ .++...|+
T Consensus 243 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~--~~l~~~l~ 287 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA--LETMDQVA 287 (318)
T ss_dssp CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCH--HHHHHHHH
T ss_pred CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHH
Confidence 3589999999999999999999999999999999865 56666654
No 362
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.77 E-value=5.5e-05 Score=79.01 Aligned_cols=65 Identities=29% Similarity=0.345 Sum_probs=48.9
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcc-cceEeecCcEEEEEEE
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYK-EGQMLKSNRELSMTVR 298 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~-~~~Ilr~g~~v~l~V~ 298 (469)
.+++|..|.+++||+++||+.||+|++|||+++.++ +++.+.|+..... .++|.|++..+.+.+.
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g~~~~~~~~ 428 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSI--AEMRKVLAAKPAIIALQIVRGNESIYLLMR 428 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhCCCeEEEEEEECCEEEEEEEE
Confidence 489999999999999999999999999999999865 7778887642221 2444555554444443
No 363
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.75 E-value=3e-05 Score=78.48 Aligned_cols=44 Identities=27% Similarity=0.377 Sum_probs=39.1
Q ss_pred CcEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 232 VGVYISRVEEGSIAERAGLRP-----------GDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~-----------GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
.|++|..|.+++||+++||+. ||+|++|||+++.++ .++...|.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~ 305 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILD 305 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHT
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHH
Confidence 589999999999999999999 999999999999987 55666653
No 364
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.70 E-value=5.7e-05 Score=76.52 Aligned_cols=45 Identities=16% Similarity=0.128 Sum_probs=40.4
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.|++|.+|.++|||+++||++||+|++|||+++.++. ++.++|+.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~---~l~~~l~~ 307 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFA---ELRSRIAT 307 (345)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHH---HHHHHHHT
T ss_pred ceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHH---HHHHHHHh
Confidence 5899999999999999999999999999999999855 77777765
No 365
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.70 E-value=6.7e-05 Score=78.71 Aligned_cols=44 Identities=34% Similarity=0.553 Sum_probs=39.9
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
.|++|..|.+++||+++||+.||+|++|||+++.++ +++.+.|+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~--~~~~~~l~ 429 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDV--KSLQTIAQ 429 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHTT
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHh
Confidence 478999999999999999999999999999999865 77778866
No 366
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.63 E-value=4.9e-05 Score=75.86 Aligned_cols=45 Identities=27% Similarity=0.302 Sum_probs=40.5
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.|++|..|.+++||+++||++||+|++|||+++.++. ++.++|+.
T Consensus 244 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~---~l~~~l~~ 288 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISAL---ETMDQVAE 288 (318)
T ss_dssp CCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHH---HHHHHHHT
T ss_pred CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHH---HHHHHHHh
Confidence 5899999999999999999999999999999998854 77777765
No 367
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.58 E-value=4.2e-05 Score=66.31 Aligned_cols=44 Identities=16% Similarity=-0.054 Sum_probs=38.8
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.|++|..|.++++|+++ |++||+|++|||+++.++. ++..+|+.
T Consensus 25 ~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~---dl~~~l~~ 68 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLT---TYSAALKT 68 (125)
T ss_dssp CCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHH---HHHHHHTT
T ss_pred CceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHH---HHHHHHHh
Confidence 58899999999999999 9999999999999999855 66666663
No 368
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.57 E-value=1e-05 Score=81.42 Aligned_cols=57 Identities=28% Similarity=0.427 Sum_probs=0.0
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCC
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
.|++|..|.+++||+++||+.||+|++|||+++.++ .++...|+ .+..+.|+|.|..
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~-----------~~~~v~l~v~R~g 310 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSA--NDVSDVIK-----------RESTLNMVVRRGN 310 (332)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECCCH--HHHHHHHh-----------CCCeEEEEEEECC
Confidence 589999999999999999999999999999999765 55555533 3455666665543
No 369
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.55 E-value=8.7e-05 Score=74.15 Aligned_cols=58 Identities=21% Similarity=0.117 Sum_probs=47.2
Q ss_pred CcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 379 QSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 379 ~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
..||+.+... +...+++|..|.++++|+++||++||+|++|||+++.++. ++..+|+.
T Consensus 229 ~~lGi~~~~~-~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~---~l~~~l~~ 286 (324)
T 1y8t_A 229 ASLGVQVTND-KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSAD---ALVAAVRS 286 (324)
T ss_dssp EECCEEEESC-SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHH---HHHHHHHT
T ss_pred cccceEeeec-cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHH---HHHHHHHh
Confidence 3688877632 1246899999999999999999999999999999999855 66666654
No 370
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.55 E-value=7.8e-05 Score=74.71 Aligned_cols=46 Identities=24% Similarity=0.176 Sum_probs=41.0
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
.|++|.+|.++++|+++||++||+|++|||+++.++ +++.++|+..
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~---~~l~~~l~~~ 301 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA---EDVYEAVRTQ 301 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH---HHHHHHHTTC
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCH---HHHHHHHhCC
Confidence 589999999999999999999999999999999884 4777777653
No 371
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.53 E-value=0.00012 Score=83.53 Aligned_cols=56 Identities=14% Similarity=0.042 Sum_probs=46.2
Q ss_pred CcceEEEEEEcCCCCCCCcEEEEEeCCC--------CHHHHcC--CCCCCEEEEECCEEcCCCCHHHHHHHhh
Q psy14977 215 ANHGFGICVKGGANNPGVGVYISRVEEG--------SIAERAG--LRPGDSILQVNGIPFTGISHEEALKMCF 277 (469)
Q Consensus 215 ~~~GlGf~i~gg~~~~~~gi~V~~V~pg--------spA~~aG--L~~GD~Il~VNG~~v~~~s~~~av~~ir 277 (469)
...|+|+.+.-.. .+++|..|.++ +||+++| |+ ||+|++|||+++.++. ++..+|+
T Consensus 735 ~~~g~G~~~~~~~----~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~ 800 (1045)
T 1k32_A 735 RSGRIACDFKLDG----DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLS 800 (1045)
T ss_dssp CCCBCSEEEEEET----TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHH
T ss_pred ccceecEEEEEeC----CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhc
Confidence 3468888876532 37999999998 9999999 99 9999999999999875 5666665
No 372
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.48 E-value=9.9e-05 Score=76.38 Aligned_cols=58 Identities=14% Similarity=0.058 Sum_probs=44.7
Q ss_pred CcccEEEecccccC--CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 379 QSLGLMIRGGVEYN--LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 379 ~~LGfsi~Gg~e~~--~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.++||.+....+.. ..++|..|.++|||+++||++||+|++|||+++.++. +.++|+.
T Consensus 74 ~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~----~~~~l~~ 133 (403)
T 3k50_A 74 YGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV----ESELLQG 133 (403)
T ss_dssp CSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT----GGGGTSC
T ss_pred cceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh----HHHHhhC
Confidence 47777766433211 2478999999999999999999999999999999875 3445554
No 373
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.45 E-value=0.00012 Score=79.53 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=43.9
Q ss_pred CcccEEEecccccCCcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHH
Q psy14977 379 QSLGLMIRGGVEYNLGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFD 436 (469)
Q Consensus 379 ~~LGfsi~Gg~e~~~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~ 436 (469)
..||+.+... ..|++|..|.++|||+++||++||+|++|||++|. ..++.+++.
T Consensus 485 ~~lG~~~~~~---~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~-~~~l~~~l~ 538 (597)
T 4fgm_A 485 VNFGAKYKAS---PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQAT-EQSVKRILE 538 (597)
T ss_dssp CCCSEEEEEE---TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECC-TTTHHHHHT
T ss_pred cccceEEecc---CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECC-HHHHHHHHH
Confidence 3788887633 24899999999999999999999999999999994 443555544
No 374
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.20 E-value=0.0002 Score=72.48 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=40.2
Q ss_pred CcEEEEEecCCCHHHHcCCCC-----------CcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 393 LGIFITGVDKDSVAERAGLLV-----------SQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~-----------GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.|++|.+|.+++||+++||++ ||+|++|||+++.++. ++..+|..
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~---dl~~~l~~ 306 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGS---DLYRILDQ 306 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSH---HHHHHHTT
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHH---HHHHHHHh
Confidence 489999999999999999999 9999999999999866 66666644
No 375
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.11 E-value=7.3e-05 Score=75.09 Aligned_cols=45 Identities=20% Similarity=0.176 Sum_probs=0.0
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCcchHHHHHHHHHh
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLILSDHDKDFDTVIS 440 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~s~h~eav~~Lk~ 440 (469)
.|++|..|.+++||+++||++||+|++|||+++.++. ++.++|+.
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~---~~~~~l~~ 298 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSAN---DVSDVIKR 298 (332)
T ss_dssp ------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHH---HHHHHHhC
Confidence 5889999999999999999999999999999998755 66666654
No 376
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.09 E-value=7.8e-05 Score=78.17 Aligned_cols=58 Identities=26% Similarity=0.389 Sum_probs=0.0
Q ss_pred CcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceEeecCcEEEEEEECCC
Q psy14977 232 VGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQMLKSNRELSMTVRSPS 301 (469)
Q Consensus 232 ~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~Ilr~g~~v~l~V~~~~ 301 (469)
.+++|..|.+++||+++||+.||+|++|||+++.++ +++.++|+ .....+.|+|.|..
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~--~~l~~~l~----------~~~~~v~l~v~R~g 440 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNI--AELRKVLD----------SKPSVLALNIQRGD 440 (448)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHH----------cCCCeEEEEEEECC
Confidence 479999999999999999999999999999999854 56666643 12235666666543
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.18 E-value=0.0036 Score=71.34 Aligned_cols=55 Identities=7% Similarity=-0.214 Sum_probs=46.4
Q ss_pred cccEEEecccccCCcEEEEEecCC--------CHHHHcC--CCCCcEEEEEecEEecCcchHHHHHHHHHhC
Q psy14977 380 SLGLMIRGGVEYNLGIFITGVDKD--------SVAERAG--LLVSQLTLYQFIKEFLILSDHDKDFDTVISF 441 (469)
Q Consensus 380 ~LGfsi~Gg~e~~~GI~V~~V~pg--------s~A~~aG--Lr~GD~IL~VNG~sv~~~s~h~eav~~Lk~~ 441 (469)
++|+.+.- .+.+++|..|.++ +||+++| |+ ||+|++|||+++.++. +++.+|+..
T Consensus 738 g~G~~~~~---~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~---~~~~~~~~~ 802 (1045)
T 1k32_A 738 RIACDFKL---DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS---NIYRVLSEK 802 (1045)
T ss_dssp BCSEEEEE---ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB---CHHHHHHTT
T ss_pred eecEEEEE---eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh---hHHHhhcCC
Confidence 77877753 2358999999998 9999999 99 9999999999999977 677788764
No 378
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.87 E-value=0.011 Score=63.27 Aligned_cols=54 Identities=19% Similarity=0.111 Sum_probs=44.9
Q ss_pred CCcEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHhhhcCcccceE
Q psy14977 231 GVGVYISRVEEGSIAERAGLRPGDSILQVNGIPFTGISHEEALKMCFFEGYKEGQM 286 (469)
Q Consensus 231 ~~gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~~s~~~av~~ir~~~~~~~~I 286 (469)
..+++|..|.++++|+.+|++.||+|++|||++|.++ .++.++|+.++...+.+
T Consensus 414 ~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~ 467 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVF 467 (539)
T ss_dssp CCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEE
T ss_pred ceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEE
Confidence 3589999999999999999999999999999999976 66677777655554444
No 379
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=38.43 E-value=19 Score=38.53 Aligned_cols=32 Identities=9% Similarity=-0.148 Sum_probs=23.8
Q ss_pred CcEEEEEecCCCHHHHcCCCCCcEEEEEecEEecCc
Q psy14977 393 LGIFITGVDKDSVAERAGLLVSQLTLYQFIKEFLIL 428 (469)
Q Consensus 393 ~GI~V~~V~pgs~A~~aGLr~GD~IL~VNG~sv~~~ 428 (469)
..+||..+..... ++++||+|++|||+++..+
T Consensus 96 G~i~V~dv~~~~s----~I~vGdEIlsING~pv~e~ 127 (583)
T 3dor_A 96 GRFYFVDIMTFSS----EIRVGDELLEVDGAPVQDV 127 (583)
T ss_dssp SCEEEEEECSSCC----SSCTTCEEEEETTEEHHHH
T ss_pred CcEEEEecccccc----CCCCCCEEEEECCccHHHH
Confidence 3578876643332 6999999999999998653
No 380
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=31.75 E-value=39 Score=36.12 Aligned_cols=30 Identities=30% Similarity=0.554 Sum_probs=22.3
Q ss_pred cEEEEEeCCCCHHHHcCCCCCCEEEEECCEEcCC
Q psy14977 233 GVYISRVEEGSIAERAGLRPGDSILQVNGIPFTG 266 (469)
Q Consensus 233 gi~V~~V~pgspA~~aGL~~GD~Il~VNG~~v~~ 266 (469)
.++|..+.... +++.+||+|++|||+++..
T Consensus 97 ~i~V~dv~~~~----s~I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 97 RFYFVDIMTFS----SEIRVGDELLEVDGAPVQD 126 (583)
T ss_dssp CEEEEEECSSC----CSSCTTCEEEEETTEEHHH
T ss_pred cEEEEeccccc----cCCCCCCEEEEECCccHHH
Confidence 47777663322 1699999999999999853
Done!