Diaphorina citri psyllid: psy1497


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MRKNFGSDIDKYLLQTSGRIKTSGTEGSITINGHERNLSQFRKLSCYIMQDNQLHANLTVEEAMNVATALKLGKDLTKAARKDVFSMRDCHFLHLSGHLPRGTLLNLSGLWGIGVFNVLSPLATYEP
ccccccccHHHHHHHHHcccccccCEEEEEEccCCccccccccEEEEEEccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccCEccccccccEEEECccccccccc
***NFGSDIDKYLLQTSGRIKTSGTEGSITINGHERNLSQFRKLSCYIMQDNQLHANLTVEEAMNVATALKLGKDLTKAARKDVFSMRDCHFLHLSGHLPRGTLLNLSGLWGIGVFNVLSPLATYEP
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MRKNFGSDIDKYLLQTSGRIKTSGTEGSITINGHERNLSQFRKLSCYIMQDNQLHANLTVEEAMNVATALKLGKDLTKAARKDVFSMRDCHFLHLSGHLPRGTLLNLSGLWGIGVFNVLSPLATYEP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ATP-binding cassette sub-family G member 1 Transporter involved in macrophage lipid homeostasis. Is an active component of the macrophage lipid export complex. Could also be involved in intracellular lipid transport processes. The role in cellular lipid homeostasis may not be limited to macrophages.confidentQ64343
ATP-binding cassette sub-family G member 4 May be involved in macrophage lipid homeostasis.confidentQ9H172

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0019534 [MF]toxin transporter activityprobableGO:0005215, GO:0003674
GO:0010888 [BP]negative regulation of lipid storageprobableGO:0010883, GO:0008150, GO:0065007, GO:0048519, GO:0032879, GO:0050789
GO:0009897 [CC]external side of plasma membraneprobableGO:0009986, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0017127 [MF]cholesterol transporter activityprobableGO:0005319, GO:0005215, GO:0015248, GO:0022892, GO:0003674
GO:0055099 [BP]response to high density lipoprotein particle stimulusprobableGO:0009719, GO:0050896, GO:0008150, GO:0042221, GO:0055094, GO:0010033
GO:0033993 [BP]response to lipidprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0055091 [BP]phospholipid homeostasisprobableGO:0042592, GO:0050801, GO:0048878, GO:0055088, GO:0065007, GO:0008150, GO:0055081, GO:0065008
GO:0005548 [MF]phospholipid transporter activityprobableGO:0005319, GO:0005215, GO:0022892, GO:0003674
GO:0055037 [CC]recycling endosomeprobableGO:0005737, GO:0043231, GO:0043227, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0005768, GO:0043226
GO:0034437 [MF]glycoprotein transporter activityprobableGO:0008565, GO:0005215, GO:0022892, GO:0003674, GO:1901505
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0032367 [BP]intracellular cholesterol transportprobableGO:0033036, GO:0006810, GO:0015918, GO:0046907, GO:0015850, GO:0032366, GO:0032365, GO:0030301, GO:0006869, GO:0044765, GO:0044763, GO:0044699, GO:0071702, GO:0008150, GO:0009987, GO:0051234, GO:0010876, GO:0051179, GO:0051649, GO:0051641
GO:0046982 [MF]protein heterodimerization activityprobableGO:0046983, GO:0003674, GO:0005488, GO:0005515
GO:0043531 [MF]ADP bindingprobableGO:0043168, GO:0017076, GO:0030554, GO:0097159, GO:0003674, GO:1901363, GO:1901265, GO:0043167, GO:0036094, GO:0032559, GO:0032553, GO:0032549, GO:0032555, GO:0005488, GO:0000166, GO:0032550, GO:0001883, GO:0001882
GO:0044707 [BP]single-multicellular organism processprobableGO:0032501, GO:0008150, GO:0044699
GO:0033700 [BP]phospholipid effluxprobableGO:0006810, GO:0051234, GO:0006869, GO:0015914, GO:0071702, GO:0015711, GO:0051179, GO:0044765, GO:0006820, GO:0008150, GO:0015748, GO:0033036, GO:0010876, GO:0006811, GO:0044699
GO:0042987 [BP]amyloid precursor protein catabolic processprobableGO:0044238, GO:0019538, GO:0043170, GO:0071704, GO:0008150, GO:0008152, GO:0042982
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0034436 [BP]glycoprotein transportprobableGO:0033036, GO:0008104, GO:0006810, GO:0045184, GO:0044765, GO:0008150, GO:0071702, GO:0015031, GO:0051234, GO:0051179, GO:0044699, GO:1901264
GO:0034041 [MF]sterol-transporting ATPase activityprobableGO:0003674, GO:0034040, GO:0016887, GO:0042626, GO:0016820, GO:0042623, GO:1901618, GO:0015399, GO:0022804, GO:0005319, GO:0016787, GO:0005215, GO:0017111, GO:0003824, GO:0022891, GO:0016818, GO:0022892, GO:0043492, GO:0016817, GO:0015665, GO:0016462, GO:0022857, GO:0015248, GO:0015405
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0010875 [BP]positive regulation of cholesterol effluxprobableGO:0032368, GO:0051050, GO:0032374, GO:0032376, GO:0032371, GO:0032370, GO:0032373, GO:0065007, GO:0051049, GO:0048518, GO:0008150, GO:0032879, GO:0050789, GO:0010874
GO:0042632 [BP]cholesterol homeostasisprobableGO:0042592, GO:0048878, GO:0055088, GO:0065007, GO:0008150, GO:0065008, GO:0055092
GO:0008203 [BP]cholesterol metabolic processprobableGO:0044238, GO:0044710, GO:0016125, GO:0008202, GO:0006629, GO:0006066, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:1901360, GO:1901615
GO:0033344 [BP]cholesterol effluxprobableGO:0051234, GO:0006810, GO:0015918, GO:0006869, GO:0015850, GO:0030301, GO:0044765, GO:0008150, GO:0071702, GO:0033036, GO:0010876, GO:0051179, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TIF, chain A
Confidence level:confident
Coverage over the Query: 2-127
View the alignment between query and template
View the model in PyMOL