Query psy1498
Match_columns 122
No_of_seqs 93 out of 95
Neff 3.5
Searched_HMMs 29240
Date Fri Aug 16 17:26:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1498.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1498hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ega_A Pellino-2, protein pell 100.0 2.8E-47 9.5E-52 310.2 7.2 88 14-102 86-177 (263)
2 3ega_A Pellino-2, protein pell 99.1 1.2E-11 4.2E-16 101.0 0.7 47 70-117 81-130 (263)
3 1g6g_A Protein kinase RAD53; b 64.4 4.8 0.00017 27.7 2.8 49 15-80 35-83 (127)
4 3hx1_A SLR1951 protein; P74513 57.7 12 0.00042 26.0 4.0 52 16-81 30-87 (131)
5 1gxc_A CHK2, CDS1, serine/thre 55.7 13 0.00046 26.2 3.9 60 15-81 47-108 (149)
6 1lgp_A Cell cycle checkpoint p 53.5 9 0.00031 25.6 2.6 51 15-81 23-73 (116)
7 1g3g_A Protien kinase SPK1; FH 46.9 16 0.00055 26.3 3.2 49 16-81 64-112 (164)
8 1dmz_A Protein (protein kinase 45.6 24 0.00081 25.3 3.9 30 18-61 29-58 (158)
9 1mzk_A Kinase associated prote 41.6 22 0.00075 24.7 3.2 49 17-81 33-81 (139)
10 1r21_A Antigen KI-67; beta san 41.5 19 0.00065 24.5 2.8 48 16-81 33-80 (128)
11 1qu5_A Protein kinase SPK1; FH 40.5 29 0.001 25.7 3.8 30 18-61 53-82 (182)
12 3po8_A RV0020C protein, putati 39.1 26 0.00087 22.7 3.0 49 15-81 22-70 (100)
13 2xt9_B Putative signal transdu 35.1 27 0.00092 23.3 2.7 48 16-81 31-78 (115)
14 2csw_A Ubiquitin ligase protei 35.1 30 0.001 24.2 3.0 53 16-81 36-88 (145)
15 2pie_A E3 ubiquitin-protein li 31.1 49 0.0017 22.8 3.6 53 16-81 28-80 (138)
16 2jqj_A DNA damage response pro 30.7 32 0.0011 24.2 2.6 51 16-81 38-92 (151)
17 3oun_A Putative uncharacterize 30.6 36 0.0012 25.0 2.9 50 14-81 83-132 (157)
18 3i6u_A CDS1, serine/threonine- 29.9 27 0.00091 27.5 2.2 43 14-61 26-68 (419)
19 3va4_A Mediator of DNA damage 28.7 38 0.0013 23.7 2.6 52 16-83 45-96 (132)
20 3els_A PRE-mRNA leakage protei 27.4 83 0.0028 22.7 4.4 36 47-82 88-123 (158)
21 2jpe_A Nuclear inhibitor of pr 27.3 25 0.00086 24.4 1.5 50 18-82 57-106 (140)
22 2kb3_A Oxoglutarate dehydrogen 25.5 37 0.0013 24.1 2.1 48 16-81 66-113 (143)
23 2ff4_A Probable regulatory pro 24.3 48 0.0016 26.4 2.8 49 15-81 305-353 (388)
24 1wln_A Afadin; beta sandwich, 23.5 49 0.0017 22.2 2.4 50 16-81 36-85 (120)
25 4h87_A Kanadaptin; FHA domain 23.0 48 0.0017 23.0 2.3 51 17-81 42-99 (130)
26 3gqs_A Adenylate cyclase-like 22.2 66 0.0023 21.0 2.8 49 17-81 26-74 (106)
27 2kfu_A RV1827 PThr 22; FHA dom 21.0 56 0.0019 23.8 2.4 49 16-82 75-123 (162)
No 1
>3ega_A Pellino-2, protein pellino homolog 2; FHA domain, E3 ubiquitin ligase, substrate binding phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3egb_A
Probab=100.00 E-value=2.8e-47 Score=310.20 Aligned_cols=88 Identities=47% Similarity=0.722 Sum_probs=78.8
Q ss_pred ccceeeeccCCCCCCCeEEeccCCCCc---cCccccccccceeeeeeecCC-CceeeEeecccCCCCCeeeccCCccccc
Q psy1498 14 QVYQHKIGRSSEKPIDFIVLDTLQAGV---DHKNMASTISRFACRILCNRK-TLECRVFAAGFDSSSNIFLGIGRSSEKP 89 (122)
Q Consensus 14 ~~dMFQiGRs~e~piDFvV~dt~~g~~---~~~~~~sTiSRfAcRil~~R~-p~~aRiyAagFDss~nIFlGegrsKw~~ 89 (122)
++||||||||+|+||||||+||+||++ ++++.|||||||||||+|||+ ||+|||||||||+++||||||+|+||+.
T Consensus 86 ~tDMFQIGRste~pIDFvV~dt~~g~~~~~~~~~~~StISRfACRI~~dR~pP~~ariyAAgFdss~nIfLgekA~KW~~ 165 (263)
T 3ega_A 86 DTDMFQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKN 165 (263)
T ss_dssp TEEEEEEESCCSTTCSEECCCC----------CCCCCCSCSSCEEEEEESSTTCCEEEEESCCCTTSEEEECTTSCEEEC
T ss_pred CcchhhhcCCCCCCCCeEEeccccccccCCcCCcccchhhheeEEEEeccCCCceeeEEecccCcccceeccccCCceec
Confidence 579999999999999999999999976 578899999999999999999 9999999999999999999999999998
Q ss_pred cCceeeecccCCc
Q psy1498 90 IDFIVLDTLQAGV 102 (122)
Q Consensus 90 iD~vvmDglTtn~ 102 (122)
.|+ +|||||||+
T Consensus 166 ~~g-~~DGLTTNG 177 (263)
T 3ega_A 166 PDG-HMDGLTTNG 177 (263)
T ss_dssp TTS-CEEECCSSC
T ss_pred CCC-ccccccccc
Confidence 888 999999996
No 2
>3ega_A Pellino-2, protein pellino homolog 2; FHA domain, E3 ubiquitin ligase, substrate binding phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3egb_A
Probab=99.09 E-value=1.2e-11 Score=100.98 Aligned_cols=47 Identities=38% Similarity=0.598 Sum_probs=37.4
Q ss_pred cccCCCCCeeeccCCccccccCceeeecccCCc---CCcccccceeeeeee
Q psy1498 70 AGFDSSSNIFLGIGRSSEKPIDFIVLDTLQAGV---DHKNMASTISRSKIS 117 (122)
Q Consensus 70 agFDss~nIFlGegrsKw~~iD~vvmDglTtn~---~~~~~~sTisR~~~~ 117 (122)
=.+|+.+|||| +||+++++||||+||+..+++ ++++.|||||||||-
T Consensus 81 Y~~D~~tDMFQ-IGRste~pIDFvV~dt~~g~~~~~~~~~~~StISRfACR 130 (263)
T 3ega_A 81 YTHDKDTDMFQ-VGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACR 130 (263)
T ss_dssp EEEETTEEEEE-EESCCSTTCSEECCCC----------CCCCCCSCSSCEE
T ss_pred eecCCCcchhh-hcCCCCCCCCeEEeccccccccCCcCCcccchhhheeEE
Confidence 35799999998 999999999999999998875 578899999999994
No 3
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=64.40 E-value=4.8 Score=27.68 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=32.1
Q ss_pred cceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeee
Q psy1498 15 VYQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFL 80 (122)
Q Consensus 15 ~dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFl 80 (122)
.+.+-|||+.+ .|.++-|. +.|||.-|+|..+.. ..+|-... |..-.|+
T Consensus 35 ~~~~~IGR~~~--~di~l~~~-----------~~vSr~Ha~i~~~~~---g~~~l~Dl-S~NGT~v 83 (127)
T 1g6g_A 35 KKVWTFGRNPA--CDYHLGNI-----------SRLSNKHFQILLGED---GNLLLNDI-STNGTWL 83 (127)
T ss_dssp CEEEEEESSTT--SSEECCSC-----------TTSCSSCEEEEECTT---SCEEEEEC-CSSCCEE
T ss_pred CCCEEECCCCC--CCEEeCCC-----------CCCChhHeEEEECCC---CcEEEEEC-CcCCeEE
Confidence 34788999987 67777653 469999999998633 12444444 3333555
No 4
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=57.67 E-value=12 Score=26.02 Aligned_cols=52 Identities=17% Similarity=0.210 Sum_probs=32.7
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCC-CceeeEeecccC-----CCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRK-TLECRVFAAGFD-----SSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~-p~~aRiyAagFD-----ss~nIFlG 81 (122)
+.+-|||+.+ .|.++-|. +|||.=|+|..... --...++--..| |..-.|+.
T Consensus 30 ~~~~IGR~~~--~di~l~d~------------~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT~vN 87 (131)
T 3hx1_A 30 TFYTIGRSPR--ADIRIKSQ------------FVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGLMIN 87 (131)
T ss_dssp SEEEEESSTT--SSEECCCS------------SSCTTCEEEEEC------CCEEEEESCTTSCCCSSCEEET
T ss_pred CCEEECCCCC--CCEEECCC------------CcChhheEEEEEccCCCceEEEEEECCCCCCCCCCceEEC
Confidence 4578999987 78777543 59999999988743 222234555554 55556664
No 5
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=55.65 E-value=13 Score=26.20 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=37.1
Q ss_pred cceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCC-CceeeEeecccCCCCC-eeec
Q psy1498 15 VYQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRK-TLECRVFAAGFDSSSN-IFLG 81 (122)
Q Consensus 15 ~dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~-p~~aRiyAagFDss~n-IFlG 81 (122)
.+.+-|||+. ..|+++-|..-.. ...-.+|||.=|+|..+.. +-.-++|-.. -|+| .|+.
T Consensus 47 ~~~~~IGR~~--~~di~l~d~~~~~---~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D--~StNGT~VN 108 (149)
T 1gxc_A 47 NDNYWFGRDK--SCEYCFDEPLLKR---TDKYRTYSKKHFRIFREVGPKNSYIAYIED--HSGNGTFVN 108 (149)
T ss_dssp SSEEEEESST--TCSEECCCGGGGG---SSGGGGSCTTCEEEEEEECTTSSEEEEEEE--CCSSCEEET
T ss_pred CCCEEecCCC--CCCEEECCccccc---cccCCcCchhheEEEEECCCCceeEEEEEE--CCCCCeEEC
Confidence 4568899987 4788887661000 0112489999999998876 3222444444 3566 7764
No 6
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=53.47 E-value=9 Score=25.58 Aligned_cols=51 Identities=24% Similarity=0.312 Sum_probs=31.9
Q ss_pred cceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 15 VYQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 15 ~dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
.+.+-|||+.+ .|+++-|. .+|||.-|+|..+...- ++|--. .|..-.|+.
T Consensus 23 ~~~~~iGR~~~--~di~l~~~-----------~~vSr~Ha~i~~~~~~~--~~~l~D-~S~NGt~vn 73 (116)
T 1lgp_A 23 KREWTIGRRRG--CDLSFPSN-----------KLVSGDHCRIVVDEKSG--QVTLED-TSTSGTVIN 73 (116)
T ss_dssp SSEEEEESSTT--SSEECTTC-----------TTSCTTCEEEEECTTTC--CEEEEE-CSSSCCCCC
T ss_pred CCCEEECCCCC--CCEEeCCC-----------CCCChhHeEEEEECCCC--eEEEEE-CCcCCcEEC
Confidence 45688999985 56666542 47999999999874322 233333 344445653
No 7
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=46.87 E-value=16 Score=26.31 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=32.0
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
+-+-|||+.+ .|+++-|. ++|||.-|+|..+.. .++|--.. |..-.|+.
T Consensus 64 ~~~~IGR~~~--~di~l~d~-----------~~vSr~Ha~I~~~~~---g~~~l~Dl-S~NGT~vN 112 (164)
T 1g3g_A 64 KVWTFGRNPA--CDYHLGNI-----------SRLSNKHFQILLGED---GNLLLNDI-STNGTWLN 112 (164)
T ss_dssp EEEEEESSSS--SSEECCCC-----------TTTTSSCEEEEECST---TCEEEEEC-CSSCEEET
T ss_pred CcEEECCCCC--CCEEeCCc-----------CCcChhHEEEEECCC---CCEEEEEC-CCCCeEEC
Confidence 3678999887 67777653 469999999998633 12344444 33335653
No 8
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=45.61 E-value=24 Score=25.32 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=23.4
Q ss_pred eeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCC
Q psy1498 18 HKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRK 61 (122)
Q Consensus 18 FQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~ 61 (122)
+-|||+.+ .|+++-|. +|||.-|+|.++..
T Consensus 29 ~~IGR~~~--~di~l~d~------------~VSr~Ha~I~~~~~ 58 (158)
T 1dmz_A 29 FFIGRSED--CNCKIEDN------------RLSRVHCFIFKKRH 58 (158)
T ss_dssp EEEESSTT--SSEECCCT------------TSCSSSEEEEEEEC
T ss_pred EEECCCCC--CCEEeCCC------------CcChHHeEEEEecC
Confidence 78999875 57666543 79999999998763
No 9
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=41.63 E-value=22 Score=24.71 Aligned_cols=49 Identities=22% Similarity=0.260 Sum_probs=33.4
Q ss_pred eeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 17 QHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 17 MFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
.+-|||+.+ .|.++-| .+|||.-|+|..+.... ++|-....|..-.|+.
T Consensus 33 ~~~IGR~~~--~di~l~d------------~~VSr~Ha~i~~~~~~~--~~~l~DlgS~NGT~vN 81 (139)
T 1mzk_A 33 PVKLGRVSP--SDLALKD------------SEVSGKHAQITWNSTKF--KWELVDMGSLNGTLVN 81 (139)
T ss_dssp SEEEESSSS--CSEECCC------------TTSSSEEEEEEEETTTT--EEEEEETTCSSCCEET
T ss_pred eEEeeCCCC--CCEEeCC------------CCCChHHcEEEEECCCC--EEEEEECCCCCCEEEC
Confidence 578999987 4666543 36999999999876522 3444455566666764
No 10
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=41.47 E-value=19 Score=24.48 Aligned_cols=48 Identities=19% Similarity=0.262 Sum_probs=32.3
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
..+-|||+.+ .|.++-| .+|||.-|+|..+- ..+|--...|..-.|+.
T Consensus 33 ~~~~IGR~~~--~di~l~d------------~~VSr~Ha~i~~~~----~~~~l~Dl~S~nGt~vN 80 (128)
T 1r21_A 33 STCLFGRGIE--CDIRIQL------------PVVSKQHCKIEIHE----QEAILHNFSSTNPTQVN 80 (128)
T ss_dssp SEEEEESSTT--SSEECCC------------TTSCTTCEEEEECS----SCEEECCCCSSSCCEET
T ss_pred CCEEECCCCC--CCEEECC------------CCCChhHEEEEEEC----CEEEEEECCCCCCEEEC
Confidence 4678999876 5766654 37999999998853 33444455555556653
No 11
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=40.47 E-value=29 Score=25.68 Aligned_cols=30 Identities=33% Similarity=0.528 Sum_probs=22.9
Q ss_pred eeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCC
Q psy1498 18 HKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRK 61 (122)
Q Consensus 18 FQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~ 61 (122)
+-|||+.+ .|+++-| .+|||.-|+|..+..
T Consensus 53 ~~IGR~~~--~di~l~d------------~~VSr~HA~I~~~~~ 82 (182)
T 1qu5_A 53 FFIGRSED--CNCKIED------------NRLSRVHCFIFKKRH 82 (182)
T ss_dssp EEESSSTT--SSSCCCC------------TTSCSSCEEEEEECC
T ss_pred EEECCCCC--CCEEECC------------CCcChHHeEEEEecC
Confidence 77999875 5666543 379999999998773
No 12
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=39.10 E-value=26 Score=22.75 Aligned_cols=49 Identities=20% Similarity=0.285 Sum_probs=31.8
Q ss_pred cceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 15 VYQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 15 ~dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
.+.+-|||+.+ .|.++.| ..|||.=|+|..+..- ++--..+|..-.|+.
T Consensus 22 ~~~~~IGR~~~--~di~l~d------------~~vSr~Ha~i~~~~~~----~~l~Dl~S~nGt~vn 70 (100)
T 3po8_A 22 EGSNIIGRGQD--AQFRLPD------------TGVSRRHLEIRWDGQV----ALLADLNSTNGTTVN 70 (100)
T ss_dssp SEEEEEESSTT--CSEECCC------------TTSCSSCEEEEECSSC----EEEEECSCSSCCEET
T ss_pred CCCEEEeCCCC--CCEECCC------------CCcChhhCEEEEeCCE----EEEEECCCCCCEEEC
Confidence 44688999875 5666654 3699999999975432 333444455556663
No 13
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=35.15 E-value=27 Score=23.33 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=32.4
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
..+-|||+.+ .|.++-| .+|||.-|+|..+.. ++|--...|..-.|+.
T Consensus 31 ~~~~IGR~~~--~di~l~d------------~~vSr~Ha~i~~~~~----~~~l~Dl~S~nGt~vn 78 (115)
T 2xt9_B 31 PTTSAGRHPD--SDIFLDD------------VTVSRRHAEFRLEGG----EFQVVDVGSLNGTYVN 78 (115)
T ss_dssp SEEEEESSTT--SSEECCS------------TTSCSSCEEEEEETT----EEEEEECSCSSCEEET
T ss_pred CCEEECCCCC--CCEEeCC------------cccChhheEEEEECC----EEEEEECCCCCCeEEC
Confidence 4678999875 5666543 479999999998632 4444455555556664
No 14
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=35.15 E-value=30 Score=24.24 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=35.0
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
+.+-|||..+ .|+++-|.. ...+|||.-|+|..+.+ .++|--...+..-.|+.
T Consensus 36 ~~~~IGR~~~--~di~l~~~~--------~~~~VSr~Ha~i~~~~~---g~~~l~Dl~S~NGT~vN 88 (145)
T 2csw_A 36 CEVTVGRGFG--VTYQLVSKI--------CPLMISRNHCVLKQNPE---GQWTIMDNKSLNGVWLN 88 (145)
T ss_dssp CCEEEESSTT--SSEECCCSS--------CGGGSCTTCEEEEECTT---SCEEEEBSSCSSCEEES
T ss_pred CcEEECCCCC--CCEEECCCC--------cCCCCChhHeEEEEcCC---CeEEEEECCCCCCeEEC
Confidence 4688999984 677776651 12379999999998543 12444445566667764
No 15
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=31.07 E-value=49 Score=22.84 Aligned_cols=53 Identities=17% Similarity=0.275 Sum_probs=34.9
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
..+-|||+.+ .|.++-|.. ...+|||.-|+|..+.+. ++|--...|..-.|+.
T Consensus 28 ~~~~IGR~~~--~di~l~~~~--------~~~~VSr~Ha~i~~~~~g---~~~l~Dl~S~NGT~vN 80 (138)
T 2pie_A 28 CEVTVGRGFG--VTYQLVSKI--------CPLMISRNHCVLKQNPEG---QWTIMDNKSLNGVWLN 80 (138)
T ss_dssp CCEEEESSSS--SSEECCCSS--------CTTSSCSSCEEEEECTTS---CEEEEECSCSSCEEET
T ss_pred CeEEECCCCC--CCEEeCCCC--------cCCCCChhHeEEEEcCCC---cEEEEECCCCCCeEEC
Confidence 3578999985 677777651 124799999999885431 3444455566667764
No 16
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=30.73 E-value=32 Score=24.20 Aligned_cols=51 Identities=22% Similarity=0.238 Sum_probs=32.8
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCC--C--ceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRK--T--LECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~--p--~~aRiyAagFDss~nIFlG 81 (122)
..+-|||+.+ .|+++-|. +|||.-|+|.+... + -...++--.. |..-.|+.
T Consensus 38 ~~~~IGR~~~--~di~l~d~------------~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NGT~VN 92 (151)
T 2jqj_A 38 NVTTIGRSRS--CDVILSEP------------DISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNGTFIN 92 (151)
T ss_dssp SCEEEESSTT--SSEECCCT------------TCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEET
T ss_pred CeEEeCCCCC--CCEEECCC------------CCccccCEEEEecccCCcCcCCEEEEEEC-CCCCeEEC
Confidence 4688999975 57776643 59999999998422 1 2345555555 43336653
No 17
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=30.59 E-value=36 Score=24.98 Aligned_cols=50 Identities=20% Similarity=0.276 Sum_probs=33.7
Q ss_pred ccceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 14 QVYQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 14 ~~dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
..+.+-|||+.+ .|+++-| .+|||.=|+|..+.. +++--..+|..-.|+.
T Consensus 83 ~~~~~~IGR~~~--~dI~L~d------------~~VSr~HA~I~~~~~----~~~l~DlgStNGT~VN 132 (157)
T 3oun_A 83 REGSNIIGRGQD--AQFRLPD------------TGVSRRHLEIRWDGQ----VALLADLNSTNGTTVN 132 (157)
T ss_dssp CSEEEEEESSTT--CSEECCC------------TTSCTTCEEEEECSS----CEEEEECSCSSCCEET
T ss_pred CCCcEEEEeCCC--CCEEeCC------------CCcChhHEEEEEECC----EEEEEECCCCCCeEEC
Confidence 345688999875 5766654 379999999998543 2444455566666663
No 18
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=29.88 E-value=27 Score=27.46 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=29.9
Q ss_pred ccceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCC
Q psy1498 14 QVYQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRK 61 (122)
Q Consensus 14 ~~dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~ 61 (122)
..+.+-|||+. ..|+++-|+. -+ ....-.+|||.=|+|..+..
T Consensus 26 ~~~~~~iGR~~--~~~~~~~~~~--~~-~~~~~~~vS~~H~~i~~~~~ 68 (419)
T 3i6u_A 26 VNDNYWFGRDK--SCEYCFDEPL--LK-RTDKYRTYSKKHFRIFREVG 68 (419)
T ss_dssp CSSEEEEESST--TSSEETTCTT--GG-GCSGGGGSCTTCEEEECCEE
T ss_pred cCCCEEecCCC--ccCEEECCcc--cc-cccccccccccceEEEEEcC
Confidence 45789999995 4888887761 10 11123789999999987655
No 19
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=28.69 E-value=38 Score=23.70 Aligned_cols=52 Identities=13% Similarity=0.017 Sum_probs=32.9
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeeccC
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLGIG 83 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlGeg 83 (122)
+.+-|||+.+ .|.++-| .+|||.=|+|..+.... +++-....|..=.|+...
T Consensus 45 ~~~~IGR~~~--~di~l~d------------~~VSr~HA~i~~~~~~~--~~~l~Dl~S~NGT~vNg~ 96 (132)
T 3va4_A 45 GKNVVGRSPD--CSVALPF------------PSISKQHAVIEISAWNK--APILQDCGSLNGTQIVKP 96 (132)
T ss_dssp EEEEEESSTT--SSEECCC------------TTSCTTCEEEEECSTTS--CCEEEECSCSSCEEETTT
T ss_pred CCEEEccCCC--CCEEeCC------------CCcChhHEEEEEEcCCC--EEEEEECCCCCCeEECCE
Confidence 4577999876 4666654 37999999998864211 233344455555777443
No 20
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=27.41 E-value=83 Score=22.66 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=25.9
Q ss_pred ccccceeeeeeecCCCceeeEeecccCCCCCeeecc
Q psy1498 47 STISRFACRILCNRKTLECRVFAAGFDSSSNIFLGI 82 (122)
Q Consensus 47 sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlGe 82 (122)
.+|||.=|+|......-.-++|--..+|..=.|+..
T Consensus 88 ~~VSr~HA~I~~~~~~~~~~~~l~Dl~StNGT~VNg 123 (158)
T 3els_A 88 ETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNN 123 (158)
T ss_dssp TTSCSSCEEEEEEEETTEEEEEEEECSCSSCCEETT
T ss_pred CCCCcccEEEEEEccCCeeEEEEEeCCCCCccEECC
Confidence 489999999998765434456666667777788743
No 21
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=27.32 E-value=25 Score=24.36 Aligned_cols=50 Identities=26% Similarity=0.434 Sum_probs=31.9
Q ss_pred eeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeecc
Q psy1498 18 HKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLGI 82 (122)
Q Consensus 18 FQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlGe 82 (122)
+-|||+.+ ..|+++-| .+|||.-|+|..+.. ..++|--...|..=.|+..
T Consensus 57 ~~IGR~~~-~~di~l~d------------~~VSr~Ha~i~~~~~--~~~~~l~Dl~S~NGT~vNg 106 (140)
T 2jpe_A 57 YLFGRNPD-LCDFTIDH------------QSCSRVHAALVYHKH--LKRVFLIDLNSTHGTFLGH 106 (140)
T ss_dssp CCBSSCTT-TSSSCCCC------------SSSCTTSBEEEEBSS--SCCEEEECCSCSSCEESSS
T ss_pred EEecCCCc-cCCEEeCC------------CCcChhheEEEEECC--CCcEEEEECCCCCCeEECC
Confidence 67899876 13555443 469999999998763 1234555555666667643
No 22
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=25.55 E-value=37 Score=24.07 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=31.2
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
+.+-|||+.+ .|.++-| .+|||.-|+|..+.. +++--...|..-.|+.
T Consensus 66 ~~~~IGR~~~--~di~l~d------------~~VSr~Ha~I~~~~~----~~~l~DlgS~NGT~VN 113 (143)
T 2kb3_A 66 PTTTAGRHPE--SDIFLDD------------VTVSRRHAEFRINEG----EFEVVDVGSLNGTYVN 113 (143)
T ss_dssp SEEEESSCTT--CSBCCCC------------SSCCSSSEEEEEETT----EEEEEESCCSSCCEET
T ss_pred CCeeccCCCC--CCEEeCC------------CCcChhhEEEEEECC----EEEEEECCCcCCeEEC
Confidence 4678999876 4555543 479999999988532 3444445555556664
No 23
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=24.28 E-value=48 Score=26.38 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=32.6
Q ss_pred cceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 15 VYQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 15 ~dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
.+.+-|||+.+ .|.++-| .+|||.=|+|..+-. .+|--...|.+-.|+.
T Consensus 305 ~~~~~iGR~~~--~di~l~~------------~~vSr~Ha~i~~~~~----~~~l~Dl~S~nGt~vn 353 (388)
T 2ff4_A 305 AAATRIGRLHD--NDIVLDS------------ANVSRHHAVIVDTGT----NYVINDLRSSNGVHVQ 353 (388)
T ss_dssp SSEEEEESSTT--SSEECCC------------TTSCTTCEEEEECSS----CEEEEECSCSSCCEET
T ss_pred CCCEEEecCCC--CeEEECC------------CccChhHeEEEEECC----EEEEEECCCCCCeEEC
Confidence 35688999987 5776654 469999999987532 2344444555556663
No 24
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=23.47 E-value=49 Score=22.23 Aligned_cols=50 Identities=8% Similarity=0.122 Sum_probs=30.5
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
..+-|||......|.++.| ..|||.-|+|..+-.. ++--...+..-.|+.
T Consensus 36 ~~~~IGr~r~~~~di~l~~------------~~vSr~Ha~i~~~~~~----~~l~dl~S~ngt~vN 85 (120)
T 1wln_A 36 SVTEVGTEKFDDNSIQLFG------------PGIQPHHCDLTNMDGV----VTVTPRSMDAETYVD 85 (120)
T ss_dssp EEEECSSSCCSTTCCCCCC------------TTCCSSCEEEEESSSC----EEEEESCSSSCEEET
T ss_pred CCEEECCCCCCCCcEEECC------------CCCchhheEEEEcCCE----EEEEECCCCCCEEEC
Confidence 3467897533456666643 3699999999875323 333344455556663
No 25
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=22.96 E-value=48 Score=23.00 Aligned_cols=51 Identities=18% Similarity=0.230 Sum_probs=32.2
Q ss_pred eeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCC-------CceeeEeecccCCCCCeeec
Q psy1498 17 QHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRK-------TLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 17 MFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~-------p~~aRiyAagFDss~nIFlG 81 (122)
.+-|||+.+ .|+++-|. +|||.=|+|..... ....++|--...|..=-|+.
T Consensus 42 ~~~IGR~~~--~di~l~~~------------~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~Dl~StNGT~vN 99 (130)
T 4h87_A 42 YCLFGRLSG--CDVCLEHP------------SVSRYHAVLQHRASGPDGECDSNGPGFYLYDLGSTHGTFLN 99 (130)
T ss_dssp EEEEESSTT--SSEECCCT------------TSCSSCEEEEEBCCCCCC------CCEEEEECSCSSCEEET
T ss_pred eEEEcCCcC--CCEEeCCC------------CcchhcEEEEEecccCccceeccCCcceEeeCCCCCceEEC
Confidence 467999865 68777544 59999999975433 12334555555566656663
No 26
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=22.19 E-value=66 Score=20.97 Aligned_cols=49 Identities=18% Similarity=0.339 Sum_probs=30.7
Q ss_pred eeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeec
Q psy1498 17 QHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLG 81 (122)
Q Consensus 17 MFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlG 81 (122)
.+-|||+.. ..|.++-| .+|||.=|+|..+.+ .+++-....|..-.|+.
T Consensus 26 ~~~iGR~~~-~~di~l~d------------~~vSr~Ha~i~~~~~---~~~~l~Dl~S~nGt~vn 74 (106)
T 3gqs_A 26 TYIVGSDPQ-VADIVLSD------------MSISRQHAKIIIGND---NSVLIEDLGSKNGVIVE 74 (106)
T ss_dssp EEEEESCTT-TCSEECCC------------TTSCSSCEEEEECTT---SCEEEEECSCSSCCEET
T ss_pred EEEEeECCC-cCCEEeCC------------CCcchhhcEEEECCC---CcEEEEECcCCCCeEEC
Confidence 478999863 24666654 469999999988743 12344444444446763
No 27
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=20.96 E-value=56 Score=23.77 Aligned_cols=49 Identities=16% Similarity=0.191 Sum_probs=32.4
Q ss_pred ceeeeccCCCCCCCeEEeccCCCCccCccccccccceeeeeeecCCCceeeEeecccCCCCCeeecc
Q psy1498 16 YQHKIGRSSEKPIDFIVLDTLQAGVDHKNMASTISRFACRILCNRKTLECRVFAAGFDSSSNIFLGI 82 (122)
Q Consensus 16 dMFQiGRs~e~piDFvV~dt~~g~~~~~~~~sTiSRfAcRil~~R~p~~aRiyAagFDss~nIFlGe 82 (122)
+.+-|||+.+ .|.++-| .+|||.-|+|..+.. +++--...|..-.|+..
T Consensus 75 ~~~~IGR~~~--~di~l~d------------~~VSr~HA~I~~~~~----~~~l~DlgS~NGT~VNg 123 (162)
T 2kfu_A 75 AITSAGRHPD--SDIFLDD------------VTVSRRHAEFRLENN----EFNVVDVGSLNGTYVNR 123 (162)
T ss_dssp SEEEEESCSS--SSEESTT------------TSSSSCSEEEEEETT----EEEEECCCCSSCEEETT
T ss_pred CCEEECCCCC--CCEEECC------------CCcChhhEEEEEECC----EEEEEECCCCCCeEECC
Confidence 4678999876 5655543 479999999998643 34444555566566643
Done!