Query psy15002
Match_columns 357
No_of_seqs 306 out of 4080
Neff 10.2
Searched_HMMs 46136
Date Fri Aug 16 17:58:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15002.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15002hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4194|consensus 100.0 9.5E-37 2.1E-41 273.3 8.3 296 45-354 44-341 (873)
2 KOG4194|consensus 100.0 1.1E-35 2.4E-40 266.5 1.6 261 91-353 150-439 (873)
3 KOG4237|consensus 100.0 2E-33 4.4E-38 241.2 -3.7 285 44-342 34-358 (498)
4 PLN00113 leucine-rich repeat r 100.0 5.8E-28 1.3E-32 247.3 15.7 259 90-352 93-354 (968)
5 PLN00113 leucine-rich repeat r 99.9 6.6E-27 1.4E-31 239.6 15.6 258 90-351 118-377 (968)
6 KOG4237|consensus 99.9 3.2E-26 7E-31 197.1 -3.4 259 94-355 50-347 (498)
7 PRK15387 E3 ubiquitin-protein 99.9 3.3E-23 7.2E-28 200.0 13.6 246 65-351 204-466 (788)
8 KOG0444|consensus 99.9 1.9E-25 4.1E-30 202.8 -4.8 257 91-355 79-340 (1255)
9 KOG0444|consensus 99.9 1.4E-25 3E-30 203.6 -5.8 248 90-346 103-355 (1255)
10 PRK15370 E3 ubiquitin-protein 99.9 4.4E-22 9.6E-27 193.3 11.5 245 65-343 181-428 (754)
11 KOG0472|consensus 99.9 3E-25 6.6E-30 191.6 -10.9 251 90-351 68-318 (565)
12 KOG0472|consensus 99.9 4E-25 8.7E-30 190.9 -11.1 253 90-353 45-297 (565)
13 PRK15387 E3 ubiquitin-protein 99.9 1.6E-20 3.5E-25 181.6 16.6 229 90-355 201-446 (788)
14 KOG0618|consensus 99.9 8.9E-24 1.9E-28 199.4 -6.0 260 88-354 239-500 (1081)
15 PRK15370 E3 ubiquitin-protein 99.8 1.8E-20 3.9E-25 182.1 12.5 228 90-347 178-405 (754)
16 KOG0618|consensus 99.8 8.7E-22 1.9E-26 186.1 -6.5 244 91-346 200-468 (1081)
17 PLN03210 Resistant to P. syrin 99.7 1.1E-15 2.3E-20 158.2 20.3 124 89-219 588-714 (1153)
18 cd00116 LRR_RI Leucine-rich re 99.7 6E-18 1.3E-22 152.1 0.2 249 92-342 25-319 (319)
19 KOG0617|consensus 99.7 9.1E-19 2E-23 135.1 -5.0 185 158-348 29-217 (264)
20 PLN03210 Resistant to P. syrin 99.7 7.6E-15 1.6E-19 151.9 21.4 148 115-274 591-741 (1153)
21 KOG0617|consensus 99.6 8.5E-19 1.8E-23 135.3 -6.9 158 138-300 33-191 (264)
22 cd00116 LRR_RI Leucine-rich re 99.6 1.1E-17 2.5E-22 150.2 -3.1 255 94-349 2-297 (319)
23 KOG1259|consensus 99.4 1.3E-14 2.9E-19 121.9 0.1 201 138-347 214-416 (490)
24 COG4886 Leucine-rich repeat (L 99.4 5.3E-13 1.2E-17 123.5 6.9 199 142-349 97-296 (394)
25 PF14580 LRR_9: Leucine-rich r 99.4 3.2E-13 7E-18 108.3 2.8 105 186-295 20-126 (175)
26 KOG3207|consensus 99.3 1.4E-13 3.1E-18 121.0 -0.3 86 258-343 246-339 (505)
27 PF14580 LRR_9: Leucine-rich r 99.3 6.9E-13 1.5E-17 106.4 3.3 128 159-289 16-147 (175)
28 KOG0532|consensus 99.3 4.8E-14 1E-18 127.8 -4.2 197 93-299 53-251 (722)
29 KOG3207|consensus 99.3 3.8E-13 8.2E-18 118.4 1.1 228 92-320 95-340 (505)
30 COG4886 Leucine-rich repeat (L 99.3 2.3E-12 5.1E-17 119.2 6.3 172 140-319 118-290 (394)
31 KOG0532|consensus 99.3 9.7E-14 2.1E-18 125.9 -3.8 215 117-340 54-270 (722)
32 KOG1259|consensus 99.3 6E-13 1.3E-17 112.0 0.4 200 114-324 215-417 (490)
33 PF13855 LRR_8: Leucine rich r 99.2 2.4E-11 5.2E-16 80.4 4.0 61 282-342 1-61 (61)
34 KOG0531|consensus 99.1 4.1E-12 9E-17 118.0 -1.2 215 114-343 73-290 (414)
35 KOG0531|consensus 99.1 7.7E-12 1.7E-16 116.2 -0.7 245 92-348 74-323 (414)
36 PF13855 LRR_8: Leucine rich r 99.1 7.9E-11 1.7E-15 78.0 4.0 61 258-318 1-61 (61)
37 KOG1909|consensus 99.1 3E-12 6.4E-17 109.9 -3.6 241 90-342 30-310 (382)
38 KOG1909|consensus 99.0 4.6E-11 1E-15 102.7 -0.3 206 138-344 30-284 (382)
39 KOG4658|consensus 98.8 2.4E-09 5.2E-14 106.7 5.1 128 90-220 523-653 (889)
40 PLN03150 hypothetical protein; 98.7 1.4E-08 3E-13 98.9 6.6 84 235-319 420-503 (623)
41 PLN03150 hypothetical protein; 98.7 2.7E-08 6E-13 96.9 7.6 93 260-352 420-512 (623)
42 KOG1859|consensus 98.7 2.6E-10 5.6E-15 106.8 -6.8 197 138-342 84-291 (1096)
43 KOG1859|consensus 98.7 4.1E-10 8.9E-15 105.5 -5.8 179 106-293 102-290 (1096)
44 PF13306 LRR_5: Leucine rich r 98.6 1.8E-07 3.9E-12 72.1 8.3 121 228-355 7-127 (129)
45 PF13306 LRR_5: Leucine rich r 98.6 2.2E-07 4.8E-12 71.5 8.5 127 200-333 3-129 (129)
46 KOG1644|consensus 98.6 5.1E-08 1.1E-12 78.1 4.8 106 138-245 42-152 (233)
47 KOG4579|consensus 98.5 5.2E-09 1.1E-13 78.4 -4.2 135 210-348 28-164 (177)
48 KOG4579|consensus 98.4 5.3E-09 1.1E-13 78.4 -4.9 86 260-347 55-140 (177)
49 KOG4658|consensus 98.4 2.5E-07 5.5E-12 92.5 4.7 127 114-244 524-653 (889)
50 KOG2982|consensus 98.4 7.9E-08 1.7E-12 81.5 0.4 222 115-336 47-285 (418)
51 KOG1644|consensus 98.3 1.1E-06 2.5E-11 70.4 5.9 19 230-248 61-79 (233)
52 PF12799 LRR_4: Leucine Rich r 98.3 6.3E-07 1.4E-11 54.4 3.1 38 307-345 2-39 (44)
53 KOG2982|consensus 98.3 2.3E-07 4.9E-12 78.7 0.8 208 139-346 46-265 (418)
54 PF12799 LRR_4: Leucine Rich r 98.3 9.9E-07 2.1E-11 53.5 3.3 39 139-178 2-40 (44)
55 PRK15386 type III secretion pr 98.2 7.2E-06 1.6E-10 74.3 9.4 133 138-293 52-188 (426)
56 COG5238 RNA1 Ran GTPase-activa 98.2 4E-07 8.6E-12 76.3 1.0 17 158-174 88-104 (388)
57 KOG2120|consensus 98.2 2.6E-08 5.7E-13 84.3 -6.5 223 92-316 138-373 (419)
58 KOG2120|consensus 98.1 4.5E-08 9.7E-13 82.9 -7.7 177 162-340 185-373 (419)
59 PRK15386 type III secretion pr 98.0 6.3E-05 1.4E-09 68.3 10.8 70 90-173 52-123 (426)
60 COG5238 RNA1 Ran GTPase-activa 97.9 2.3E-06 5.1E-11 71.8 0.6 206 138-344 30-286 (388)
61 KOG3665|consensus 97.7 6.6E-06 1.4E-10 80.5 -1.3 180 90-272 60-264 (699)
62 KOG3665|consensus 97.5 3.9E-05 8.4E-10 75.2 1.1 55 138-194 173-229 (699)
63 KOG2739|consensus 97.4 3.7E-05 8.1E-10 64.4 0.5 103 138-242 43-152 (260)
64 KOG2123|consensus 97.0 1.9E-05 4.1E-10 66.7 -5.8 81 186-271 20-101 (388)
65 KOG2123|consensus 96.9 3.9E-05 8.5E-10 64.9 -4.6 100 232-336 18-123 (388)
66 KOG2739|consensus 96.7 0.0009 2E-08 56.3 2.1 103 231-337 41-150 (260)
67 PF00560 LRR_1: Leucine Rich R 96.4 0.0013 2.9E-08 33.1 0.8 20 332-352 2-21 (22)
68 PF00560 LRR_1: Leucine Rich R 96.0 0.0034 7.3E-08 31.6 1.1 16 140-155 2-17 (22)
69 KOG4341|consensus 95.5 0.00029 6.2E-09 63.0 -6.7 251 90-340 138-436 (483)
70 PF13504 LRR_7: Leucine rich r 95.5 0.01 2.3E-07 27.7 1.5 12 308-319 3-14 (17)
71 smart00370 LRR Leucine-rich re 95.4 0.012 2.6E-07 30.9 1.8 22 330-351 2-23 (26)
72 smart00369 LRR_TYP Leucine-ric 95.4 0.012 2.6E-07 30.9 1.8 22 330-351 2-23 (26)
73 PF13504 LRR_7: Leucine rich r 95.4 0.0097 2.1E-07 27.8 1.3 14 163-176 2-15 (17)
74 smart00369 LRR_TYP Leucine-ric 95.4 0.01 2.2E-07 31.2 1.5 21 162-182 2-22 (26)
75 smart00370 LRR Leucine-rich re 95.4 0.01 2.2E-07 31.2 1.5 21 162-182 2-22 (26)
76 KOG4341|consensus 95.4 0.00031 6.6E-09 62.8 -7.1 229 114-342 139-413 (483)
77 PF01462 LRRNT: Leucine rich r 94.3 0.025 5.4E-07 30.3 1.2 25 46-79 1-25 (28)
78 KOG1947|consensus 93.8 0.0031 6.8E-08 59.9 -5.1 32 301-332 357-389 (482)
79 KOG1947|consensus 93.2 0.0069 1.5E-07 57.5 -3.8 203 138-340 188-437 (482)
80 KOG3864|consensus 93.1 0.018 3.9E-07 46.8 -1.0 82 90-171 101-185 (221)
81 KOG4308|consensus 92.0 0.00096 2.1E-08 62.7 -11.0 180 140-319 89-303 (478)
82 smart00013 LRRNT Leucine rich 91.8 0.11 2.4E-06 29.0 1.5 26 46-80 1-26 (33)
83 KOG0473|consensus 90.3 0.0056 1.2E-07 50.8 -6.7 81 138-220 42-122 (326)
84 PF13516 LRR_6: Leucine Rich r 89.1 0.065 1.4E-06 27.4 -1.0 18 330-347 2-19 (24)
85 KOG3864|consensus 88.8 0.082 1.8E-06 43.1 -1.1 76 139-217 102-184 (221)
86 KOG0473|consensus 88.3 0.013 2.9E-07 48.6 -5.9 58 258-317 65-122 (326)
87 KOG4308|consensus 87.1 0.002 4.4E-08 60.6 -13.0 180 92-272 89-304 (478)
88 smart00364 LRR_BAC Leucine-ric 86.4 0.44 9.6E-06 24.9 1.2 17 163-179 3-19 (26)
89 smart00365 LRR_SD22 Leucine-ri 85.3 0.73 1.6E-05 24.1 1.7 14 163-176 3-16 (26)
90 KOG3763|consensus 78.5 0.66 1.4E-05 43.7 0.0 36 233-268 218-254 (585)
91 KOG3763|consensus 76.1 1.3 2.9E-05 41.8 1.3 64 207-272 216-284 (585)
92 smart00368 LRR_RI Leucine rich 75.2 2.4 5.3E-05 22.5 1.7 16 330-345 2-17 (28)
93 KOG4242|consensus 73.9 11 0.00024 35.2 6.4 59 139-197 215-280 (553)
94 smart00367 LRR_CC Leucine-rich 55.2 9.7 0.00021 19.6 1.5 17 329-345 1-18 (26)
95 TIGR00864 PCC polycystin catio 50.0 11 0.00023 43.2 2.1 31 120-151 2-32 (2740)
96 TIGR00864 PCC polycystin catio 40.9 16 0.00034 41.9 1.7 34 264-297 1-34 (2740)
97 PF05725 FNIP: FNIP Repeat; I 27.5 94 0.002 18.3 2.9 7 259-265 13-19 (44)
98 PF07771 TSGP1: Tick salivary 21.1 37 0.0008 25.5 0.3 21 30-50 7-27 (120)
No 1
>KOG4194|consensus
Probab=100.00 E-value=9.5e-37 Score=273.28 Aligned_cols=296 Identities=27% Similarity=0.468 Sum_probs=246.9
Q ss_pred cCCCCCCCCCCceeccccCCeEEecccCChhhHHHHHhhhccCCCceEEEEEecCCCCcCccccccCCC-cccEEEecCC
Q psy15002 45 QQCPPHNEISPCQCSVKKNGLDILCEFTDNQKIQHTMTTLKSKSGLIIFYLKLRHNNLPKLTGFIFFGL-DIRHLTIHNS 123 (357)
Q Consensus 45 ~~Cp~~~~~~~C~C~~~~~~~~~~C~~~~l~~i~~~~~~~~~~~~~~l~~L~l~~~~i~~l~~~~~~~~-~L~~L~l~~~ 123 (357)
..||. +|.|... -.+|...++..+.. ..+.+..|..++.|++++|.+.++....|... +|+.+.+.+|
T Consensus 44 ~~cpa-----~c~c~~~----lldcs~~~lea~~~--~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N 112 (873)
T KOG4194|consen 44 SECPA-----TCPCNTR----LLDCSDRELEAIDK--SRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKN 112 (873)
T ss_pred ccCCC-----cCCCCce----eeecCccccccccc--cccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccc
Confidence 48998 7999865 89999999887653 46778888999999999999999999888777 9999999999
Q ss_pred CcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCC-CCCCeEECCCCCCeeeCc
Q psy15002 124 SLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEG-KALTQLDLSQNSLAVVPS 202 (357)
Q Consensus 124 ~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~n~l~~~~~ 202 (357)
.++.|+.. .+...+|+.|++.+|.|+.+..+.+..++.|+.|||+.|.|++++...|.. .++++|++++|.|+.+..
T Consensus 113 ~Lt~IP~f--~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~ 190 (873)
T KOG4194|consen 113 ELTRIPRF--GHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLET 190 (873)
T ss_pred hhhhcccc--cccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccc
Confidence 99988743 333356999999999999999999999999999999999999999888887 899999999999999999
Q ss_pred cccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCC
Q psy15002 203 PALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLE 282 (357)
Q Consensus 203 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 282 (357)
+.|.++.+|.+|.|+.|+++.++...|+.+++|+.|+|..|+|..+....|.++ ++++.|.+..|++..+..+.|..+.
T Consensus 191 ~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL-~Sl~nlklqrN~I~kL~DG~Fy~l~ 269 (873)
T KOG4194|consen 191 GHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGL-PSLQNLKLQRNDISKLDDGAFYGLE 269 (873)
T ss_pred ccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCc-hhhhhhhhhhcCcccccCcceeeec
Confidence 999999999999999999999999999989999999999998887766677777 6777777777777777777777777
Q ss_pred CCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccCcccccCcc
Q psy15002 283 NLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPAAFSGLE 354 (357)
Q Consensus 283 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 354 (357)
++++|+|+.|+++.+..+++-++++|+.|+|++|.|..+....+..+++|+.|+|++|.++..++++|..+.
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~ 341 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLS 341 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHH
Confidence 777777777777777776666777777777777777777766666677777777777777777777766554
No 2
>KOG4194|consensus
Probab=100.00 E-value=1.1e-35 Score=266.48 Aligned_cols=261 Identities=30% Similarity=0.483 Sum_probs=172.3
Q ss_pred eEEEEEecCCCCcCccccccCC-CcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEec
Q psy15002 91 IIFYLKLRHNNLPKLTGFIFFG-LDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLEL 169 (357)
Q Consensus 91 ~l~~L~l~~~~i~~l~~~~~~~-~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l 169 (357)
.++.|||+.|.|++++...|.. .++++|++++|+|+.+..+.|.++ .+|..|.++.|.++.++...|.++++|+.|+|
T Consensus 150 alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~l-nsL~tlkLsrNrittLp~r~Fk~L~~L~~LdL 228 (873)
T KOG4194|consen 150 ALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSL-NSLLTLKLSRNRITTLPQRSFKRLPKLESLDL 228 (873)
T ss_pred hhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccccccccc-chheeeecccCcccccCHHHhhhcchhhhhhc
Confidence 3445566666666666666655 377888888888888877777777 36778888888888777777777777777777
Q ss_pred cCCccccccCCCCCC-C------------------------CCCeEECCCCCCeeeCccccCCCCcCceeecccccCccc
Q psy15002 170 LHNRIALIEEGDFEG-K------------------------ALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISAL 224 (357)
Q Consensus 170 ~~n~l~~~~~~~~~~-~------------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 224 (357)
..|+|..+....|.. + ++++|+++.|+++.+..+.+.++.+|+.|++++|.|..+
T Consensus 229 nrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ri 308 (873)
T KOG4194|consen 229 NRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRI 308 (873)
T ss_pred cccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhhee
Confidence 777665443333333 3 444444444444444444444555555555555555555
Q ss_pred CcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeC---cCc
Q psy15002 225 HSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIE---EGD 301 (357)
Q Consensus 225 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~ 301 (357)
..+.+...++|++|+|+.|+++.++++.|..+ .+|++|+|+.|.++.+...+|..+++|++|+|++|.+.... ...
T Consensus 309 h~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L-~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~ 387 (873)
T KOG4194|consen 309 HIDSWSFTQKLKELDLSSNRITRLDEGSFRVL-SQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVA 387 (873)
T ss_pred ecchhhhcccceeEeccccccccCChhHHHHH-HHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhh
Confidence 55555555555555555555555555555555 55566666666655555556666666677777777666543 245
Q ss_pred CCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccCcccccCc
Q psy15002 302 FEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPAAFSGL 353 (357)
Q Consensus 302 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 353 (357)
|.++++|+.|+|.+|+++.|+..+|.+++.|+.|||.+|.|..|.+++|..+
T Consensus 388 f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 388 FNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM 439 (873)
T ss_pred hccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc
Confidence 6677888888888888888888888888888888888888888888888776
No 3
>KOG4237|consensus
Probab=99.97 E-value=2e-33 Score=241.24 Aligned_cols=285 Identities=24% Similarity=0.429 Sum_probs=211.0
Q ss_pred ccCCCCCCCCCCceeccccCCeEEecccCChhhHHHHHhhhccCCCceEEEEEecCCCCcCccccccCCC-cccEEEecC
Q psy15002 44 VQQCPPHNEISPCQCSVKKNGLDILCEFTDNQKIQHTMTTLKSKSGLIIFYLKLRHNNLPKLTGFIFFGL-DIRHLTIHN 122 (357)
Q Consensus 44 ~~~Cp~~~~~~~C~C~~~~~~~~~~C~~~~l~~i~~~~~~~~~~~~~~l~~L~l~~~~i~~l~~~~~~~~-~L~~L~l~~ 122 (357)
+..||. ||.|...+ +..|+|.+.++++||..+ |.++..|.|..|.|+.||+.+|..+ +|++|++++
T Consensus 34 ~~~CP~-----pC~Cs~~~-g~~VdCr~~GL~eVP~~L-------P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~ 100 (498)
T KOG4237|consen 34 ASACPA-----PCTCSDVE-GGIVDCRGKGLTEVPANL-------PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSK 100 (498)
T ss_pred cccCCC-----CcccCCCC-CceEEccCCCcccCcccC-------CCcceEEEeccCCcccCChhhccchhhhceecccc
Confidence 558999 89999877 889999999999999776 7999999999999999999999998 899999999
Q ss_pred CCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCC-CCCCeEECCCCCCeeeC
Q psy15002 123 SSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEG-KALTQLDLSQNSLAVVP 201 (357)
Q Consensus 123 ~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~n~l~~~~ 201 (357)
|.|+.|.+++|.++..-++.++.++|+|+.++.+.|.++..|+.|.+.-|.+..++..++.- +++..|.+.+|.+..+.
T Consensus 101 N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~ 180 (498)
T KOG4237|consen 101 NNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSIC 180 (498)
T ss_pred cchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhc
Confidence 99999999999999664555566669999999999999999999999999999888777655 88999999999999999
Q ss_pred ccccCCCCcCceeecccccCc------------ccCcccCCCCCCCCEEEccCCcCcccCC-------------------
Q psy15002 202 SPALKSLNHLLILNLNHNKIS------------ALHSNAFQGLDTLEILTIFENKLSLIEP------------------- 250 (357)
Q Consensus 202 ~~~~~~l~~L~~L~l~~n~l~------------~~~~~~l~~l~~L~~L~L~~n~l~~~~~------------------- 250 (357)
...|..+.+++.+.+..|.+. ...+-.+++.....-..+.+.++..+..
T Consensus 181 ~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~ 260 (498)
T KOG4237|consen 181 KGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDF 260 (498)
T ss_pred cccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccC
Confidence 889999999999988877521 1112222333333333333333333322
Q ss_pred -------CccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCc
Q psy15002 251 -------DSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPP 323 (357)
Q Consensus 251 -------~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 323 (357)
..|..+ ++|+.|++++|+++.+.+.+|....++++|.|..|++..+...+|.++..|++|+|.+|+|+.+.+
T Consensus 261 ~d~~cP~~cf~~L-~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 261 PDSICPAKCFKKL-PNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred cCCcChHHHHhhc-ccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 234444 556666666666666666666666666666666666666665566666666666666666666666
Q ss_pred ccCCCCCCCcEEeCCCCcc
Q psy15002 324 RVFAHLPLLNSLELDGNHI 342 (357)
Q Consensus 324 ~~~~~~~~L~~L~L~~N~l 342 (357)
.+|..+..|..|+|-.|+|
T Consensus 340 ~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 340 GAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred ccccccceeeeeehccCcc
Confidence 6666666666666665554
No 4
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.95 E-value=5.8e-28 Score=247.28 Aligned_cols=259 Identities=25% Similarity=0.263 Sum_probs=157.3
Q ss_pred ceEEEEEecCCCCc-CccccccCCC-cccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEE
Q psy15002 90 LIIFYLKLRHNNLP-KLTGFIFFGL-DIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKL 167 (357)
Q Consensus 90 ~~l~~L~l~~~~i~-~l~~~~~~~~-~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L 167 (357)
+.++.|++++|.+. .+|...|... +|++|++++|.+....+.. .+ ++|++|++++|.+.+..+..++++++|++|
T Consensus 93 ~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~--~l-~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 169 (968)
T PLN00113 93 PYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG--SI-PNLETLDLSNNMLSGEIPNDIGSFSSLKVL 169 (968)
T ss_pred CCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc--cc-CCCCEEECcCCcccccCChHHhcCCCCCEE
Confidence 56788999999887 7888877444 8888888888876543321 12 457777777777776555567777777777
Q ss_pred eccCCccc-cccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCc
Q psy15002 168 ELLHNRIA-LIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLS 246 (357)
Q Consensus 168 ~l~~n~l~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 246 (357)
++++|.+. .+|..+..+++|++|++++|.+....+..+..+++|++|++++|.+....+..+..+++|+.|++++|.++
T Consensus 170 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 249 (968)
T PLN00113 170 DLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLT 249 (968)
T ss_pred ECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceec
Confidence 77777765 45555555577777777777766555556666666666666666666555555666666666666666665
Q ss_pred ccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccC
Q psy15002 247 LIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVF 326 (357)
Q Consensus 247 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 326 (357)
+..+..+..+ ++|+.|++++|.+.+..+..+..+++|++|++++|.+.+..+..+.++++|+.|++++|.+.+..+..+
T Consensus 250 ~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~ 328 (968)
T PLN00113 250 GPIPSSLGNL-KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVAL 328 (968)
T ss_pred cccChhHhCC-CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhH
Confidence 5445555555 556666666655554433444555555555555555554444444445555555555555544444334
Q ss_pred CCCCCCcEEeCCCCcccccCcccccC
Q psy15002 327 AHLPLLNSLELDGNHIHTVDPAAFSG 352 (357)
Q Consensus 327 ~~~~~L~~L~L~~N~l~~~~~~~~~~ 352 (357)
..+++|+.|++++|.+++..|..++.
T Consensus 329 ~~l~~L~~L~L~~n~l~~~~p~~l~~ 354 (968)
T PLN00113 329 TSLPRLQVLQLWSNKFSGEIPKNLGK 354 (968)
T ss_pred hcCCCCCEEECcCCCCcCcCChHHhC
Confidence 44444444444444444444443333
No 5
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=6.6e-27 Score=239.55 Aligned_cols=258 Identities=26% Similarity=0.285 Sum_probs=156.7
Q ss_pred ceEEEEEecCCCCcC-ccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEe
Q psy15002 90 LIIFYLKLRHNNLPK-LTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLE 168 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~-l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~ 168 (357)
..+++|++++|++.. +|... ..+|++|++++|.+....+..+..+ ++|++|++++|.+.+..+..+.++++|++|+
T Consensus 118 ~~L~~L~Ls~n~l~~~~p~~~--l~~L~~L~Ls~n~~~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 194 (968)
T PLN00113 118 SSLRYLNLSNNNFTGSIPRGS--IPNLETLDLSNNMLSGEIPNDIGSF-SSLKVLDLGGNVLVGKIPNSLTNLTSLEFLT 194 (968)
T ss_pred CCCCEEECcCCccccccCccc--cCCCCEEECcCCcccccCChHHhcC-CCCCEEECccCcccccCChhhhhCcCCCeee
Confidence 567788888887763 33321 2367777777777766555556555 5577777777777665555677777777777
Q ss_pred ccCCccc-cccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcc
Q psy15002 169 LLHNRIA-LIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSL 247 (357)
Q Consensus 169 l~~n~l~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 247 (357)
+++|.++ .+|..+..+++|++|++++|.+....+..+..+++|++|++++|.+....+..+..+++|+.|++++|.+.+
T Consensus 195 L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 274 (968)
T PLN00113 195 LASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSG 274 (968)
T ss_pred ccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeec
Confidence 7777765 345555555677777777776665555566666677777777666665555566666666666666666655
Q ss_pred cCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCC
Q psy15002 248 IEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFA 327 (357)
Q Consensus 248 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 327 (357)
..+..+..+ ++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+.
T Consensus 275 ~~p~~l~~l-~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 353 (968)
T PLN00113 275 PIPPSIFSL-QKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG 353 (968)
T ss_pred cCchhHhhc-cCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHh
Confidence 545555554 5666666666666554444455555666666666655554444455555555555555555543333344
Q ss_pred CCCCCcEEeCCCCcccccCccccc
Q psy15002 328 HLPLLNSLELDGNHIHTVDPAAFS 351 (357)
Q Consensus 328 ~~~~L~~L~L~~N~l~~~~~~~~~ 351 (357)
.+++|+.|++++|.+++..|+.++
T Consensus 354 ~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 354 KHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred CCCCCcEEECCCCeeEeeCChhHh
Confidence 455555555555555544444433
No 6
>KOG4237|consensus
Probab=99.90 E-value=3.2e-26 Score=197.10 Aligned_cols=259 Identities=29% Similarity=0.460 Sum_probs=217.9
Q ss_pred EEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccC-C
Q psy15002 94 YLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLH-N 172 (357)
Q Consensus 94 ~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~-n 172 (357)
.++-++..++++|.+.-. ..+.+.+..|.|+.+++.+|..+ ++|+.||||+|+|+.|.+++|.++++|..|-+.+ |
T Consensus 50 ~VdCr~~GL~eVP~~LP~--~tveirLdqN~I~~iP~~aF~~l-~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLPP--ETVEIRLDQNQISSIPPGAFKTL-HRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred eEEccCCCcccCcccCCC--cceEEEeccCCcccCChhhccch-hhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 567778888888887654 45899999999999999999999 6799999999999999999999999998887766 9
Q ss_pred ccccccCCCCCC-CCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCc-----
Q psy15002 173 RIALIEEGDFEG-KALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLS----- 246 (357)
Q Consensus 173 ~l~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~----- 246 (357)
+|+.+|.++|.. ..++.|.+.-|++..+..++|..++++..|.+.+|.+..+....|..+.+++.+.+..|.+-
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 999999999988 88999999999999999999999999999999999999998889999999999999888721
Q ss_pred -------ccCCCcccccc---------------------ccccEE----EccCCcCcccCcccccCCCCCcEEEccCCcC
Q psy15002 247 -------LIEPDSFKGLE---------------------KKLKRL----NLGGNELTRVPQTSLSKLENLRKLELLHNRI 294 (357)
Q Consensus 247 -------~~~~~~~~~~~---------------------~~L~~L----~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 294 (357)
...+..+++.- ..++.+ .-..+....-|...|..+++|++|++++|++
T Consensus 207 ~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 207 PWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred chhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 11111222110 011111 1112222233445688999999999999999
Q ss_pred ceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccCcccccCccc
Q psy15002 295 ALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPAAFSGLEA 355 (357)
Q Consensus 295 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 355 (357)
+.+..++|.+..++++|.|..|++..+...+|.++..|+.|+|.+|+|+.+.|.+|..+..
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~ 347 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFS 347 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccce
Confidence 9999999999999999999999999999999999999999999999999999999977654
No 7
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=3.3e-23 Score=200.05 Aligned_cols=246 Identities=24% Similarity=0.304 Sum_probs=162.9
Q ss_pred eEEecccCChhhHHHHHhhhccCCCceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEE
Q psy15002 65 LDILCEFTDNQKIQHTMTTLKSKSGLIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLN 144 (357)
Q Consensus 65 ~~~~C~~~~l~~i~~~~~~~~~~~~~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ 144 (357)
..++|...+++.+|..+ +..++.|++.+|+++.+|.. ..+|++|++++|.++.++. .+++|+.|+
T Consensus 204 ~~LdLs~~~LtsLP~~l-------~~~L~~L~L~~N~Lt~LP~l---p~~Lk~LdLs~N~LtsLP~-----lp~sL~~L~ 268 (788)
T PRK15387 204 AVLNVGESGLTTLPDCL-------PAHITTLVIPDNNLTSLPAL---PPELRTLEVSGNQLTSLPV-----LPPGLLELS 268 (788)
T ss_pred cEEEcCCCCCCcCCcch-------hcCCCEEEccCCcCCCCCCC---CCCCcEEEecCCccCcccC-----cccccceee
Confidence 37888888888888654 34678888888888888753 2478888888888887753 124577777
Q ss_pred ccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccC-----------------C
Q psy15002 145 LGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALK-----------------S 207 (357)
Q Consensus 145 ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-----------------~ 207 (357)
+++|.++.++.. +.+|+.|++++|.++.+|.. .++|+.|++++|+++.++.. .. .
T Consensus 269 Ls~N~L~~Lp~l----p~~L~~L~Ls~N~Lt~LP~~---p~~L~~LdLS~N~L~~Lp~l-p~~L~~L~Ls~N~L~~LP~l 340 (788)
T PRK15387 269 IFSNPLTHLPAL----PSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLASLPAL-PSELCKLWAYNNQLTSLPTL 340 (788)
T ss_pred ccCCchhhhhhc----hhhcCEEECcCCcccccccc---ccccceeECCCCccccCCCC-cccccccccccCcccccccc
Confidence 777766665431 23455566666666555542 24556666666655554320 00 0
Q ss_pred CCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEE
Q psy15002 208 LNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKL 287 (357)
Q Consensus 208 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 287 (357)
..+|+.|++++|+++.++.. .++|+.|++++|+++.++. .+.+|+.|++++|.++.++.. .++|+.|
T Consensus 341 p~~Lq~LdLS~N~Ls~LP~l----p~~L~~L~Ls~N~L~~LP~-----l~~~L~~LdLs~N~Lt~LP~l----~s~L~~L 407 (788)
T PRK15387 341 PSGLQELSVSDNQLASLPTL----PSELYKLWAYNNRLTSLPA-----LPSGLKELIVSGNRLTSLPVL----PSELKEL 407 (788)
T ss_pred ccccceEecCCCccCCCCCC----CcccceehhhccccccCcc-----cccccceEEecCCcccCCCCc----ccCCCEE
Confidence 12566666666666655321 2355666666666665432 124678888888888876642 2578888
Q ss_pred EccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccCccccc
Q psy15002 288 ELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPAAFS 351 (357)
Q Consensus 288 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~ 351 (357)
++++|.++.+|.. ..+|+.|++++|+|+.+|.. +.++++|+.|+|++|+|++..+..+.
T Consensus 408 dLS~N~LssIP~l----~~~L~~L~Ls~NqLt~LP~s-l~~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 408 MVSGNRLTSLPML----PSGLLSLSVYRNQLTRLPES-LIHLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred EccCCcCCCCCcc----hhhhhhhhhccCcccccChH-HhhccCCCeEECCCCCCCchHHHHHH
Confidence 8888888887642 35788899999999988765 46788999999999999987766653
No 8
>KOG0444|consensus
Probab=99.89 E-value=1.9e-25 Score=202.78 Aligned_cols=257 Identities=25% Similarity=0.360 Sum_probs=147.3
Q ss_pred eEEEEEecCCCCc--CccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEe
Q psy15002 91 IIFYLKLRHNNLP--KLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLE 168 (357)
Q Consensus 91 ~l~~L~l~~~~i~--~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~ 168 (357)
.++.+++.+|++. .+|.++|..-.|+.|++++|.++..+...-. .+++.+|++|+|+|..||...|.++..|-+||
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~--AKn~iVLNLS~N~IetIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEY--AKNSIVLNLSYNNIETIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhh--hcCcEEEEcccCccccCCchHHHhhHhHhhhc
Confidence 3444555555553 4555666555666666666665554432211 14455666666666666665566666666666
Q ss_pred ccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCc-ccCcccCCCCCCCCEEEccCCcCcc
Q psy15002 169 LLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKIS-ALHSNAFQGLDTLEILTIFENKLSL 247 (357)
Q Consensus 169 l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~L~~n~l~~ 247 (357)
|++|++..+|+.+..+..|++|++++|.+....-..+..+.+|++|.+++.+=+ .-.|.++..+.+|..+|++.|.+..
T Consensus 157 LS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~ 236 (1255)
T KOG0444|consen 157 LSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPI 236 (1255)
T ss_pred cccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCc
Confidence 666666666666555566666666666555544444444555555555554311 1223445556666666666666665
Q ss_pred cCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCc--ccCccc
Q psy15002 248 IEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLR--TIPPRV 325 (357)
Q Consensus 248 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~--~~~~~~ 325 (357)
+ |+.+..+ .+|+.|++++|+++.+.. ......+|++|+++.|+++.+|. +++.+++|+.|++.+|++. ++|..+
T Consensus 237 v-Pecly~l-~~LrrLNLS~N~iteL~~-~~~~W~~lEtLNlSrNQLt~LP~-avcKL~kL~kLy~n~NkL~FeGiPSGI 312 (1255)
T KOG0444|consen 237 V-PECLYKL-RNLRRLNLSGNKITELNM-TEGEWENLETLNLSRNQLTVLPD-AVCKLTKLTKLYANNNKLTFEGIPSGI 312 (1255)
T ss_pred c-hHHHhhh-hhhheeccCcCceeeeec-cHHHHhhhhhhccccchhccchH-HHhhhHHHHHHHhccCcccccCCccch
Confidence 5 4444444 566666666666666553 24445666666677776666655 4555666777777777655 565543
Q ss_pred CCCCCCCcEEeCCCCcccccCcccccCccc
Q psy15002 326 FAHLPLLNSLELDGNHIHTVDPAAFSGLEA 355 (357)
Q Consensus 326 ~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 355 (357)
+.+.+|+.+..++|.+.-+ |+.++.+.+
T Consensus 313 -GKL~~Levf~aanN~LElV-PEglcRC~k 340 (1255)
T KOG0444|consen 313 -GKLIQLEVFHAANNKLELV-PEGLCRCVK 340 (1255)
T ss_pred -hhhhhhHHHHhhccccccC-chhhhhhHH
Confidence 6666677777776666554 355555543
No 9
>KOG0444|consensus
Probab=99.89 E-value=1.4e-25 Score=203.61 Aligned_cols=248 Identities=24% Similarity=0.344 Sum_probs=169.0
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEec
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLEL 169 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l 169 (357)
..++.|||++|.+.+.|...-...++-.|.+++|.|.+|+...|.++ +.|-.||+|+|.+..+||. +..+.+|+.|+|
T Consensus 103 ~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinL-tDLLfLDLS~NrLe~LPPQ-~RRL~~LqtL~L 180 (1255)
T KOG0444|consen 103 KDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINL-TDLLFLDLSNNRLEMLPPQ-IRRLSMLQTLKL 180 (1255)
T ss_pred ccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhh-HhHhhhccccchhhhcCHH-HHHHhhhhhhhc
Confidence 45667777777777777776666677777777777777777777766 4577777777777777775 677777777777
Q ss_pred cCCcccccc-CCCCCCCCCCeEECCCCCCe--eeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCc
Q psy15002 170 LHNRIALIE-EGDFEGKALTQLDLSQNSLA--VVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLS 246 (357)
Q Consensus 170 ~~n~l~~~~-~~~~~~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 246 (357)
++|.+.... ..+-.+.+|++|.+++.+-+ .+|. .+..+.+|..++++.|.+..+ |+.+..+++|+.|+|++|.|+
T Consensus 181 s~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pt-sld~l~NL~dvDlS~N~Lp~v-Pecly~l~~LrrLNLS~N~it 258 (1255)
T KOG0444|consen 181 SNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPT-SLDDLHNLRDVDLSENNLPIV-PECLYKLRNLRRLNLSGNKIT 258 (1255)
T ss_pred CCChhhHHHHhcCccchhhhhhhcccccchhhcCCC-chhhhhhhhhccccccCCCcc-hHHHhhhhhhheeccCcCcee
Confidence 777654211 11223356777777765432 3443 566677777777777777666 556677777777777777777
Q ss_pred ccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCc--eeCcCcCCCCCCCCEeecCCCcCcccCcc
Q psy15002 247 LIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIA--LIEEGDFEGLHNLDSLVLAHNQLRTIPPR 324 (357)
Q Consensus 247 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 324 (357)
.+... .... .++++|+++.|+++.+|. ++..++.|+.|++.+|+++ ++|. .++.+.+|+.+.+++|++.-.|..
T Consensus 259 eL~~~-~~~W-~~lEtLNlSrNQLt~LP~-avcKL~kL~kLy~n~NkL~FeGiPS-GIGKL~~Levf~aanN~LElVPEg 334 (1255)
T KOG0444|consen 259 ELNMT-EGEW-ENLETLNLSRNQLTVLPD-AVCKLTKLTKLYANNNKLTFEGIPS-GIGKLIQLEVFHAANNKLELVPEG 334 (1255)
T ss_pred eeecc-HHHH-hhhhhhccccchhccchH-HHhhhHHHHHHHhccCcccccCCcc-chhhhhhhHHHHhhccccccCchh
Confidence 76432 2222 567777777777777763 5677777777777777654 4444 456677777777777777666654
Q ss_pred cCCCCCCCcEEeCCCCcccccC
Q psy15002 325 VFAHLPLLNSLELDGNHIHTVD 346 (357)
Q Consensus 325 ~~~~~~~L~~L~L~~N~l~~~~ 346 (357)
+..|..|+.|.|+.|.+-++|
T Consensus 335 -lcRC~kL~kL~L~~NrLiTLP 355 (1255)
T KOG0444|consen 335 -LCRCVKLQKLKLDHNRLITLP 355 (1255)
T ss_pred -hhhhHHHHHhcccccceeech
Confidence 366777777777777776664
No 10
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=4.4e-22 Score=193.27 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=193.1
Q ss_pred eEEecccCChhhHHHHHhhhccCCCceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEE
Q psy15002 65 LDILCEFTDNQKIQHTMTTLKSKSGLIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLN 144 (357)
Q Consensus 65 ~~~~C~~~~l~~i~~~~~~~~~~~~~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ 144 (357)
....+...+++.+|..+ +..++.|++++|.++.+|...+. +|+.|++++|.++.++.. ++.+|+.|+
T Consensus 181 ~~L~L~~~~LtsLP~~I-------p~~L~~L~Ls~N~LtsLP~~l~~--nL~~L~Ls~N~LtsLP~~----l~~~L~~L~ 247 (754)
T PRK15370 181 TELRLKILGLTTIPACI-------PEQITTLILDNNELKSLPENLQG--NIKTLYANSNQLTSIPAT----LPDTIQEME 247 (754)
T ss_pred eEEEeCCCCcCcCCccc-------ccCCcEEEecCCCCCcCChhhcc--CCCEEECCCCccccCChh----hhccccEEE
Confidence 35555666777766533 46788999999999999987663 789999999999887643 235799999
Q ss_pred ccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCccc
Q psy15002 145 LGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISAL 224 (357)
Q Consensus 145 ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 224 (357)
+++|.+..++.. + ..+|++|++++|.++.+|..+. ++|++|++++|+++.++... .++|+.|++++|.+..+
T Consensus 248 Ls~N~L~~LP~~-l--~s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~l---p~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 248 LSINRITELPER-L--PSALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAHL---PSGITHLNVQSNSLTAL 319 (754)
T ss_pred CcCCccCcCChh-H--hCCCCEEECcCCccCccccccC--CCCcEEECCCCccccCcccc---hhhHHHHHhcCCccccC
Confidence 999999988765 3 2579999999999999887664 58999999999999877532 24789999999999877
Q ss_pred CcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCC
Q psy15002 225 HSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEG 304 (357)
Q Consensus 225 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 304 (357)
+.. + .++|+.|++++|.++.++. .+ +++|+.|++++|+++.+|.. +. +.|+.|++++|+++.+|+..
T Consensus 320 P~~-l--~~sL~~L~Ls~N~Lt~LP~-~l---~~sL~~L~Ls~N~L~~LP~~-lp--~~L~~LdLs~N~Lt~LP~~l--- 386 (754)
T PRK15370 320 PET-L--PPGLKTLEAGENALTSLPA-SL---PPELQVLDVSKNQITVLPET-LP--PTITTLDVSRNALTNLPENL--- 386 (754)
T ss_pred Ccc-c--cccceeccccCCccccCCh-hh---cCcccEEECCCCCCCcCChh-hc--CCcCEEECCCCcCCCCCHhH---
Confidence 543 2 2689999999999988743 22 26899999999999987753 32 68999999999999987743
Q ss_pred CCCCCEeecCCCcCcccCcc---cCCCCCCCcEEeCCCCccc
Q psy15002 305 LHNLDSLVLAHNQLRTIPPR---VFAHLPLLNSLELDGNHIH 343 (357)
Q Consensus 305 ~~~L~~L~L~~n~l~~~~~~---~~~~~~~L~~L~L~~N~l~ 343 (357)
...|+.|++++|++..+|.. .+...+.+..+++.+|+++
T Consensus 387 ~~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 387 PAALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 24799999999999988753 3345688899999999985
No 11
>KOG0472|consensus
Probab=99.86 E-value=3e-25 Score=191.59 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=181.3
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEec
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLEL 169 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l 169 (357)
..+.++++++|.+.++|+.+.....++.+..++|++..++...... .+++.+++++|.+..++++ ++.+-.|..++.
T Consensus 68 ~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~--~~l~~l~~s~n~~~el~~~-i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSL--ISLVKLDCSSNELKELPDS-IGRLLDLEDLDA 144 (565)
T ss_pred cceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhh--hhhhhhhccccceeecCch-HHHHhhhhhhhc
Confidence 3455677777777777776666666677777777766665443332 3477777777777777654 666777777777
Q ss_pred cCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccC
Q psy15002 170 LHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIE 249 (357)
Q Consensus 170 ~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 249 (357)
.+|.++.+|++.+...++..+++.+|+++..++..+. +..|+.++...|-++.+++ .++++.+|+.|++.+|++..++
T Consensus 145 ~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP~-~lg~l~~L~~LyL~~Nki~~lP 222 (565)
T KOG0472|consen 145 TNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLPP-ELGGLESLELLYLRRNKIRFLP 222 (565)
T ss_pred cccccccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCCh-hhcchhhhHHHHhhhcccccCC
Confidence 7777777777777777777777777777777775554 7778888888887777744 4677788888888888887764
Q ss_pred CCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCC
Q psy15002 250 PDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHL 329 (357)
Q Consensus 250 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 329 (357)
.|.++ +.|++|.++.|++..++.+-...++++..|++..|++++.|.+ +.-+.+|+.||+++|.++++|.. ++++
T Consensus 223 --ef~gc-s~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde-~clLrsL~rLDlSNN~is~Lp~s-Lgnl 297 (565)
T KOG0472|consen 223 --EFPGC-SLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDE-ICLLRSLERLDLSNNDISSLPYS-LGNL 297 (565)
T ss_pred --CCCcc-HHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchH-HHHhhhhhhhcccCCccccCCcc-cccc
Confidence 56666 6788888888888877776666778888888888888887764 34467788888888888888765 3666
Q ss_pred CCCcEEeCCCCcccccCccccc
Q psy15002 330 PLLNSLELDGNHIHTVDPAAFS 351 (357)
Q Consensus 330 ~~L~~L~L~~N~l~~~~~~~~~ 351 (357)
.|++|-+.||+++++..+.+.
T Consensus 298 -hL~~L~leGNPlrTiRr~ii~ 318 (565)
T KOG0472|consen 298 -HLKFLALEGNPLRTIRREIIS 318 (565)
T ss_pred -eeeehhhcCCchHHHHHHHHc
Confidence 788888888888777655443
No 12
>KOG0472|consensus
Probab=99.86 E-value=4e-25 Score=190.86 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=225.4
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEec
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLEL 169 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l 169 (357)
..+..+.+++|.++.+..+......++.+.+.+|.+...++.. ..+ ..++.++.++|++..+++. +..+.+|..+++
T Consensus 45 v~l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l~~lp~ai-g~l-~~l~~l~vs~n~ls~lp~~-i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEVLREDLKNLACLTVLNVHDNKLSQLPAAI-GEL-EALKSLNVSHNKLSELPEQ-IGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchhhccHhhhcccceeEEEeccchhhhCCHHH-HHH-HHHHHhhcccchHhhccHH-Hhhhhhhhhhhc
Confidence 5677899999999999998888779999999999998887543 333 5699999999999999875 788999999999
Q ss_pred cCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccC
Q psy15002 170 LHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIE 249 (357)
Q Consensus 170 ~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 249 (357)
+.|.+.+++++++..-.++.++..+|++++.++ .+..+.++..+++.+|++...+++... ++.|++||...|-++.+
T Consensus 122 s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~-~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tl- 198 (565)
T KOG0472|consen 122 SSNELKELPDSIGRLLDLEDLDATNNQISSLPE-DMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETL- 198 (565)
T ss_pred cccceeecCchHHHHhhhhhhhccccccccCch-HHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcC-
Confidence 999999999999999999999999999999987 566778899999999999999887665 89999999999999988
Q ss_pred CCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCC
Q psy15002 250 PDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHL 329 (357)
Q Consensus 250 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 329 (357)
|..++++ .+|+.|++..|++..+| .|.++..|++|+++.|+|+-++++..++++++..|||+.|++++.|.++ .-+
T Consensus 199 P~~lg~l-~~L~~LyL~~Nki~~lP--ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~-clL 274 (565)
T KOG0472|consen 199 PPELGGL-ESLELLYLRRNKIRFLP--EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEI-CLL 274 (565)
T ss_pred Chhhcch-hhhHHHHhhhcccccCC--CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHH-HHh
Confidence 5567777 89999999999999998 4999999999999999999999988889999999999999999999876 567
Q ss_pred CCCcEEeCCCCcccccCcccccCc
Q psy15002 330 PLLNSLELDGNHIHTVDPAAFSGL 353 (357)
Q Consensus 330 ~~L~~L~L~~N~l~~~~~~~~~~l 353 (357)
.+|..||+++|.+++.++. ++++
T Consensus 275 rsL~rLDlSNN~is~Lp~s-Lgnl 297 (565)
T KOG0472|consen 275 RSLERLDLSNNDISSLPYS-LGNL 297 (565)
T ss_pred hhhhhhcccCCccccCCcc-cccc
Confidence 8899999999999999754 3554
No 13
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=1.6e-20 Score=181.58 Aligned_cols=229 Identities=22% Similarity=0.289 Sum_probs=156.9
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEec
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLEL 169 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l 169 (357)
..-..|+++++.++.+|..... +++.|.+.+|.++.++. .+++|++|++++|+++.++. ..++|+.|++
T Consensus 201 ~~~~~LdLs~~~LtsLP~~l~~--~L~~L~L~~N~Lt~LP~-----lp~~Lk~LdLs~N~LtsLP~----lp~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLTTLPDCLPA--HITTLVIPDNNLTSLPA-----LPPELRTLEVSGNQLTSLPV----LPPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCCcCCcchhc--CCCEEEccCCcCCCCCC-----CCCCCcEEEecCCccCcccC----cccccceeec
Confidence 4456899999999999986653 78999999999998764 23689999999999999874 2578999999
Q ss_pred cCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccC
Q psy15002 170 LHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIE 249 (357)
Q Consensus 170 ~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 249 (357)
++|.++.+|... .+|+.|++++|+++.++. .+++|+.|++++|++..++. . ..+|+.|++++|+++.++
T Consensus 270 s~N~L~~Lp~lp---~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~-l---p~~L~~L~Ls~N~L~~LP 338 (788)
T PRK15387 270 FSNPLTHLPALP---SGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA-L---PSELCKLWAYNNQLTSLP 338 (788)
T ss_pred cCCchhhhhhch---hhcCEEECcCCccccccc----cccccceeECCCCccccCCC-C---cccccccccccCcccccc
Confidence 999999888632 679999999999998875 34789999999999988743 1 124555555555555442
Q ss_pred CCccccccccccEEEccCCcCcccCccccc-----------------CCCCCcEEEccCCcCceeCcCcCCCCCCCCEee
Q psy15002 250 PDSFKGLEKKLKRLNLGGNELTRVPQTSLS-----------------KLENLRKLELLHNRIALIEEGDFEGLHNLDSLV 312 (357)
Q Consensus 250 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-----------------~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 312 (357)
. .+.+|+.|++++|+++.+|.. .. ...+|+.|++++|+++.++.. .++|+.|+
T Consensus 339 ~-----lp~~Lq~LdLS~N~Ls~LP~l-p~~L~~L~Ls~N~L~~LP~l~~~L~~LdLs~N~Lt~LP~l----~s~L~~Ld 408 (788)
T PRK15387 339 T-----LPSGLQELSVSDNQLASLPTL-PSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVL----PSELKELM 408 (788)
T ss_pred c-----cccccceEecCCCccCCCCCC-CcccceehhhccccccCcccccccceEEecCCcccCCCCc----ccCCCEEE
Confidence 1 113455555555555554421 00 113456666666666655431 34566677
Q ss_pred cCCCcCcccCcccCCCCCCCcEEeCCCCcccccCcccccCccc
Q psy15002 313 LAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPAAFSGLEA 355 (357)
Q Consensus 313 L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 355 (357)
+++|+++.+|.. ..+|+.|++++|.++.++ +.|+++..
T Consensus 409 LS~N~LssIP~l----~~~L~~L~Ls~NqLt~LP-~sl~~L~~ 446 (788)
T PRK15387 409 VSGNRLTSLPML----PSGLLSLSVYRNQLTRLP-ESLIHLSS 446 (788)
T ss_pred ccCCcCCCCCcc----hhhhhhhhhccCcccccC-hHHhhccC
Confidence 777776666542 235667777777777664 34555443
No 14
>KOG0618|consensus
Probab=99.85 E-value=8.9e-24 Score=199.37 Aligned_cols=260 Identities=26% Similarity=0.355 Sum_probs=213.6
Q ss_pred CCceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEE
Q psy15002 88 SGLIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKL 167 (357)
Q Consensus 88 ~~~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L 167 (357)
.|..++++++++|++..+|.+.....+|+.+...+|++..++...+.. .+|+.|++..|.+..+++. ..++++|++|
T Consensus 239 ~p~nl~~~dis~n~l~~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~--~~L~~l~~~~nel~yip~~-le~~~sL~tL 315 (1081)
T KOG0618|consen 239 VPLNLQYLDISHNNLSNLPEWIGACANLEALNANHNRLVALPLRISRI--TSLVSLSAAYNELEYIPPF-LEGLKSLRTL 315 (1081)
T ss_pred ccccceeeecchhhhhcchHHHHhcccceEecccchhHHhhHHHHhhh--hhHHHHHhhhhhhhhCCCc-ccccceeeee
Confidence 457888899999999999977777778999999999887776554443 5688899999999888874 6778899999
Q ss_pred eccCCccccccCCCCCC--CCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcC
Q psy15002 168 ELLHNRIALIEEGDFEG--KALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKL 245 (357)
Q Consensus 168 ~l~~n~l~~~~~~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 245 (357)
+|..|.+..+|+..+.- ..++.++.+.|++...+...-..++.|+.|++.+|+++.-....+-+.++|+.|+|++|++
T Consensus 316 dL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL 395 (1081)
T KOG0618|consen 316 DLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRL 395 (1081)
T ss_pred eehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccc
Confidence 99999998888866554 3477788888888777754444567899999999999877667788899999999999999
Q ss_pred cccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCccc
Q psy15002 246 SLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRV 325 (357)
Q Consensus 246 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 325 (357)
..++...+.++ ..|+.|+++||+++.++ .++..++.|++|...+|++...| .+..++.|+.+|++.|.++.+.-..
T Consensus 396 ~~fpas~~~kl-e~LeeL~LSGNkL~~Lp-~tva~~~~L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 396 NSFPASKLRKL-EELEELNLSGNKLTTLP-DTVANLGRLHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred ccCCHHHHhch-HHhHHHhcccchhhhhh-HHHHhhhhhHHHhhcCCceeech--hhhhcCcceEEecccchhhhhhhhh
Confidence 99988888888 89999999999999999 56888999999999999999998 4667999999999999999543221
Q ss_pred CCCCCCCcEEeCCCCcccccCcccccCcc
Q psy15002 326 FAHLPLLNSLELDGNHIHTVDPAAFSGLE 354 (357)
Q Consensus 326 ~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 354 (357)
...-++|++||++||.....+.+.|..++
T Consensus 472 ~~p~p~LkyLdlSGN~~l~~d~~~l~~l~ 500 (1081)
T KOG0618|consen 472 ALPSPNLKYLDLSGNTRLVFDHKTLKVLK 500 (1081)
T ss_pred hCCCcccceeeccCCcccccchhhhHHhh
Confidence 12228999999999998777776666554
No 15
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=1.8e-20 Score=182.09 Aligned_cols=228 Identities=26% Similarity=0.369 Sum_probs=186.0
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEec
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLEL 169 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l 169 (357)
.....|+++++.++.+|.... ..++.|++++|.++.++...+ .+|++|++++|.++.++.. + .++|+.|++
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~LtsLP~~l~----~nL~~L~Ls~N~LtsLP~~-l--~~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIP--EQITTLILDNNELKSLPENLQ----GNIKTLYANSNQLTSIPAT-L--PDTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCCcCChhhc----cCCCEEECCCCccccCChh-h--hccccEEEC
Confidence 456789999999999987643 378999999999998875433 4799999999999998764 3 347999999
Q ss_pred cCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccC
Q psy15002 170 LHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIE 249 (357)
Q Consensus 170 ~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 249 (357)
++|.++.+|..+. .+|++|++++|+++.++.. + .++|+.|++++|+++.++.. +. ++|+.|++++|.++.++
T Consensus 249 s~N~L~~LP~~l~--s~L~~L~Ls~N~L~~LP~~-l--~~sL~~L~Ls~N~Lt~LP~~-lp--~sL~~L~Ls~N~Lt~LP 320 (754)
T PRK15370 249 SINRITELPERLP--SALQSLDLFHNKISCLPEN-L--PEELRYLSVYDNSIRTLPAH-LP--SGITHLNVQSNSLTALP 320 (754)
T ss_pred cCCccCcCChhHh--CCCCEEECcCCccCccccc-c--CCCCcEEECCCCccccCccc-ch--hhHHHHHhcCCccccCC
Confidence 9999999987664 5799999999999988753 2 25899999999999987543 32 47999999999999874
Q ss_pred CCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCC
Q psy15002 250 PDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHL 329 (357)
Q Consensus 250 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 329 (357)
... +++|+.|++++|.++.++.. +. ++|+.|++++|+++.+|.. + .++|+.|++++|+|+.+|+...
T Consensus 321 ~~l----~~sL~~L~Ls~N~Lt~LP~~-l~--~sL~~L~Ls~N~L~~LP~~-l--p~~L~~LdLs~N~Lt~LP~~l~--- 387 (754)
T PRK15370 321 ETL----PPGLKTLEAGENALTSLPAS-LP--PELQVLDVSKNQITVLPET-L--PPTITTLDVSRNALTNLPENLP--- 387 (754)
T ss_pred ccc----cccceeccccCCccccCChh-hc--CcccEEECCCCCCCcCChh-h--cCCcCEEECCCCcCCCCCHhHH---
Confidence 322 26899999999999998743 33 7999999999999988753 3 4789999999999999987543
Q ss_pred CCCcEEeCCCCcccccCc
Q psy15002 330 PLLNSLELDGNHIHTVDP 347 (357)
Q Consensus 330 ~~L~~L~L~~N~l~~~~~ 347 (357)
..|+.|++++|++++++.
T Consensus 388 ~sL~~LdLs~N~L~~LP~ 405 (754)
T PRK15370 388 AALQIMQASRNNLVRLPE 405 (754)
T ss_pred HHHHHHhhccCCcccCch
Confidence 368999999999998754
No 16
>KOG0618|consensus
Probab=99.79 E-value=8.7e-22 Score=186.07 Aligned_cols=244 Identities=27% Similarity=0.376 Sum_probs=184.7
Q ss_pred eEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEecc
Q psy15002 91 IIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELL 170 (357)
Q Consensus 91 ~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 170 (357)
.++.|....|.+..+ ...+.+++.|+..+|.++.+...... .+|+++++++|.++.++ +.+..+.+|+.++..
T Consensus 200 ~l~~l~c~rn~ls~l---~~~g~~l~~L~a~~n~l~~~~~~p~p---~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n 272 (1081)
T KOG0618|consen 200 NLEVLHCERNQLSEL---EISGPSLTALYADHNPLTTLDVHPVP---LNLQYLDISHNNLSNLP-EWIGACANLEALNAN 272 (1081)
T ss_pred chhhhhhhhcccceE---EecCcchheeeeccCcceeecccccc---ccceeeecchhhhhcch-HHHHhcccceEeccc
Confidence 344455545544433 23455778888888887755443333 57888888888888887 557788888888888
Q ss_pred CCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccC---------------------
Q psy15002 171 HNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAF--------------------- 229 (357)
Q Consensus 171 ~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l--------------------- 229 (357)
+|.++.+|..++...+|+.|.+..|.+..+++ ...++..|++|++..|.+...++..+
T Consensus 273 ~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~-~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp 351 (1081)
T KOG0618|consen 273 HNRLVALPLRISRITSLVSLSAAYNELEYIPP-FLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLP 351 (1081)
T ss_pred chhHHhhHHHHhhhhhHHHHHhhhhhhhhCCC-cccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccc
Confidence 88888888877777777777777777777775 44556777777777777665543222
Q ss_pred ----CCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCC
Q psy15002 230 ----QGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGL 305 (357)
Q Consensus 230 ----~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 305 (357)
..++.|+.|.+.+|.++.---..+... .+|+.|+|++|+++.+|...+.+++.|++|+|+||+++.++. .+..+
T Consensus 352 ~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~-~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~-tva~~ 429 (1081)
T KOG0618|consen 352 SYEENNHAALQELYLANNHLTDSCFPVLVNF-KHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPD-TVANL 429 (1081)
T ss_pred cccchhhHHHHHHHHhcCcccccchhhhccc-cceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhH-HHHhh
Confidence 123567777888888776544455555 789999999999999999889999999999999999999984 66778
Q ss_pred CCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccC
Q psy15002 306 HNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVD 346 (357)
Q Consensus 306 ~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 346 (357)
..|++|...+|++...|. +.+++.|+.+|++.|+++.+.
T Consensus 430 ~~L~tL~ahsN~l~~fPe--~~~l~qL~~lDlS~N~L~~~~ 468 (1081)
T KOG0618|consen 430 GRLHTLRAHSNQLLSFPE--LAQLPQLKVLDLSCNNLSEVT 468 (1081)
T ss_pred hhhHHHhhcCCceeechh--hhhcCcceEEecccchhhhhh
Confidence 999999999999999994 678999999999999998753
No 17
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.70 E-value=1.1e-15 Score=158.19 Aligned_cols=124 Identities=23% Similarity=0.303 Sum_probs=76.6
Q ss_pred CceEEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCc-CceeChhhhcCCCCCcEE
Q psy15002 89 GLIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNE-LTRVPQTSLSKLENLRKL 167 (357)
Q Consensus 89 ~~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~-l~~~~~~~~~~l~~L~~L 167 (357)
+..++.|.+.++.+..+|... ...+|+.|++.++.+..+... +..+ ++|++|+++++. +..++. +..+++|++|
T Consensus 588 p~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~-~~~l-~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L 662 (1153)
T PLN03210 588 PPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDG-VHSL-TGLRNIDLRGSKNLKEIPD--LSMATNLETL 662 (1153)
T ss_pred CcccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccc-cccC-CCCCEEECCCCCCcCcCCc--cccCCcccEE
Confidence 356788888888888887653 344777888887777766443 2333 457777777653 444542 5666777777
Q ss_pred eccCCc-cccccCCCCCCCCCCeEECCCC-CCeeeCccccCCCCcCceeecccc
Q psy15002 168 ELLHNR-IALIEEGDFEGKALTQLDLSQN-SLAVVPSPALKSLNHLLILNLNHN 219 (357)
Q Consensus 168 ~l~~n~-l~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n 219 (357)
++++|. +..+|..+..+++|+.|++++| .+..++... ++++|+.|++++|
T Consensus 663 ~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc 714 (1153)
T PLN03210 663 KLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI--NLKSLYRLNLSGC 714 (1153)
T ss_pred EecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCC
Confidence 776653 5566666666667777777664 344444321 4455555555554
No 18
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.67 E-value=6e-18 Score=152.06 Aligned_cols=249 Identities=25% Similarity=0.245 Sum_probs=147.1
Q ss_pred EEEEEecCCCCcC-----ccccccCCCcccEEEecCCCcceec------CcccccccccceEEEccCCcCceeChhhhcC
Q psy15002 92 IFYLKLRHNNLPK-----LTGFIFFGLDIRHLTIHNSSLAVVE------ESSLSSIGKKLKRLNLGGNELTRVPQTSLSK 160 (357)
Q Consensus 92 l~~L~l~~~~i~~-----l~~~~~~~~~L~~L~l~~~~l~~~~------~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~ 160 (357)
++.|+++++.++. ++........++++.++++.+.... ...+... .+|++|++++|.+....+..+..
T Consensus 25 L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~-~~L~~L~l~~~~~~~~~~~~~~~ 103 (319)
T cd00116 25 LQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG-CGLQELDLSDNALGPDGCGVLES 103 (319)
T ss_pred ccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhc-CceeEEEccCCCCChhHHHHHHH
Confidence 7788888888743 3333333335778888777665311 1122232 46888888888877544444544
Q ss_pred CCC---CcEEeccCCccc-----cccCCCCCC-CCCCeEECCCCCCeeeC----ccccCCCCcCceeecccccCcccC--
Q psy15002 161 LEN---LRKLELLHNRIA-----LIEEGDFEG-KALTQLDLSQNSLAVVP----SPALKSLNHLLILNLNHNKISALH-- 225 (357)
Q Consensus 161 l~~---L~~L~l~~n~l~-----~~~~~~~~~-~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~-- 225 (357)
+.+ |++|++++|.++ .+...+... ++|+.|++++|.++... ...+..+++|++|++++|.++...
T Consensus 104 l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 183 (319)
T cd00116 104 LLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIR 183 (319)
T ss_pred HhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHH
Confidence 444 888888888776 222233344 67788888888776321 123455667888888887776321
Q ss_pred --cccCCCCCCCCEEEccCCcCcccCCC----ccccccccccEEEccCCcCcccCccccc-----CCCCCcEEEccCCcC
Q psy15002 226 --SNAFQGLDTLEILTIFENKLSLIEPD----SFKGLEKKLKRLNLGGNELTRVPQTSLS-----KLENLRKLELLHNRI 294 (357)
Q Consensus 226 --~~~l~~l~~L~~L~L~~n~l~~~~~~----~~~~~~~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l 294 (357)
...+...++|+.|++++|.++..... .+... ++|+.|++++|.++......+. ..+.|++|++++|.+
T Consensus 184 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~-~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i 262 (319)
T cd00116 184 ALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL-KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDI 262 (319)
T ss_pred HHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc-CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCC
Confidence 22334456788888888777644322 22233 5678888888777642221111 236777888887777
Q ss_pred ceeCc----CcCCCCCCCCEeecCCCcCcccCc----ccCCCC-CCCcEEeCCCCcc
Q psy15002 295 ALIEE----GDFEGLHNLDSLVLAHNQLRTIPP----RVFAHL-PLLNSLELDGNHI 342 (357)
Q Consensus 295 ~~~~~----~~~~~~~~L~~L~L~~n~l~~~~~----~~~~~~-~~L~~L~L~~N~l 342 (357)
+.... ..+..+++|+.+++++|.+...+. ..+... +.|+.+++.+|+|
T Consensus 263 ~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 263 TDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 53211 123345677788888887774432 222333 5777777777764
No 19
>KOG0617|consensus
Probab=99.67 E-value=9.1e-19 Score=135.12 Aligned_cols=185 Identities=29% Similarity=0.451 Sum_probs=150.1
Q ss_pred hcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCE
Q psy15002 158 LSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEI 237 (357)
Q Consensus 158 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 237 (357)
+-++.+++.|.+++|+++.+|+.+..+.+|+.|++++|+++.++. .++.+++|+.|+++-|++... |..|+.+|.|+.
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~-~issl~klr~lnvgmnrl~~l-prgfgs~p~lev 106 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPT-SISSLPKLRILNVGMNRLNIL-PRGFGSFPALEV 106 (264)
T ss_pred ccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcCh-hhhhchhhhheecchhhhhcC-ccccCCCchhhh
Confidence 456778889999999999999999999999999999999999986 688899999999999998766 677999999999
Q ss_pred EEccCCcCccc-CCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCC
Q psy15002 238 LTIFENKLSLI-EPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHN 316 (357)
Q Consensus 238 L~L~~n~l~~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n 316 (357)
||+.+|++.+- -|+.|-.+ ..|..|.+++|.+.-+|++ ++.+.+|+.|.+..|.+-++|. .++.+..|++|.+.+|
T Consensus 107 ldltynnl~e~~lpgnff~m-~tlralyl~dndfe~lp~d-vg~lt~lqil~lrdndll~lpk-eig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYM-TTLRALYLGDNDFEILPPD-VGKLTNLQILSLRDNDLLSLPK-EIGDLTRLRELHIQGN 183 (264)
T ss_pred hhccccccccccCCcchhHH-HHHHHHHhcCCCcccCChh-hhhhcceeEEeeccCchhhCcH-HHHHHHHHHHHhcccc
Confidence 99999988653 24445455 6788899999999888864 7888999999999998888876 4667888999999999
Q ss_pred cCcccCcccCCCC---CCCcEEeCCCCcccccCcc
Q psy15002 317 QLRTIPPRVFAHL---PLLNSLELDGNHIHTVDPA 348 (357)
Q Consensus 317 ~l~~~~~~~~~~~---~~L~~L~L~~N~l~~~~~~ 348 (357)
+++-+||.. +++ .+-+.+.+.+|+|-.-+.+
T Consensus 184 rl~vlppel-~~l~l~~~k~v~r~E~NPwv~pIae 217 (264)
T KOG0617|consen 184 RLTVLPPEL-ANLDLVGNKQVMRMEENPWVNPIAE 217 (264)
T ss_pred eeeecChhh-hhhhhhhhHHHHhhhhCCCCChHHH
Confidence 999888854 322 3345566777776554433
No 20
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.66 E-value=7.6e-15 Score=151.91 Aligned_cols=148 Identities=20% Similarity=0.298 Sum_probs=67.9
Q ss_pred ccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccCCc-cccccCCCCCCCCCCeEECC
Q psy15002 115 IRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNR-IALIEEGDFEGKALTQLDLS 193 (357)
Q Consensus 115 L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~L~~L~l~ 193 (357)
|+.|.+.++.+..++.... +.+|++|++++|.+..++.. +..+++|++|+++++. ++.+|. +...++|++|+++
T Consensus 591 Lr~L~~~~~~l~~lP~~f~---~~~L~~L~L~~s~l~~L~~~-~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~ 665 (1153)
T PLN03210 591 LRLLRWDKYPLRCMPSNFR---PENLVKLQMQGSKLEKLWDG-VHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLS 665 (1153)
T ss_pred cEEEEecCCCCCCCCCcCC---ccCCcEEECcCccccccccc-cccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEec
Confidence 4444444444444432221 13455555555555544332 3455555555555432 334432 3333555555555
Q ss_pred CCCC-eeeCccccCCCCcCceeecccc-cCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCc
Q psy15002 194 QNSL-AVVPSPALKSLNHLLILNLNHN-KISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELT 271 (357)
Q Consensus 194 ~n~l-~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 271 (357)
+|.. ..++ ..+..+++|+.|++++| .+..++. .+ ++++|+.|++++|......+ ....+|+.|++++|.+.
T Consensus 666 ~c~~L~~lp-~si~~L~~L~~L~L~~c~~L~~Lp~-~i-~l~sL~~L~Lsgc~~L~~~p----~~~~nL~~L~L~~n~i~ 738 (1153)
T PLN03210 666 DCSSLVELP-SSIQYLNKLEDLDMSRCENLEILPT-GI-NLKSLYRLNLSGCSRLKSFP----DISTNISWLDLDETAIE 738 (1153)
T ss_pred CCCCccccc-hhhhccCCCCEEeCCCCCCcCccCC-cC-CCCCCCEEeCCCCCCccccc----cccCCcCeeecCCCccc
Confidence 5432 2222 34555555666666554 2333322 11 45566666666653211111 11145566666666655
Q ss_pred ccC
Q psy15002 272 RVP 274 (357)
Q Consensus 272 ~~~ 274 (357)
.+|
T Consensus 739 ~lP 741 (1153)
T PLN03210 739 EFP 741 (1153)
T ss_pred ccc
Confidence 544
No 21
>KOG0617|consensus
Probab=99.65 E-value=8.5e-19 Score=135.29 Aligned_cols=158 Identities=28% Similarity=0.445 Sum_probs=139.8
Q ss_pred ccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecc
Q psy15002 138 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLN 217 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 217 (357)
..++.|.+|+|+++.++++ +..+.+|+.|++.+|+++++|..+..+++|+.|+++-|++...+ ..|+.+|.|+.|++.
T Consensus 33 s~ITrLtLSHNKl~~vppn-ia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lp-rgfgs~p~levldlt 110 (264)
T KOG0617|consen 33 SNITRLTLSHNKLTVVPPN-IAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILP-RGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhhcccCceeecCCc-HHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCc-cccCCCchhhhhhcc
Confidence 4689999999999999987 89999999999999999999999999999999999999987666 479999999999999
Q ss_pred cccCcc-cCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCce
Q psy15002 218 HNKISA-LHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIAL 296 (357)
Q Consensus 218 ~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 296 (357)
+|.+.. ..|+-|..+..|+.|.+++|.+..+ |...+.+ ++|+.|.+.+|.+-++|. .++.+..|++|++.+|.++.
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe~l-p~dvg~l-t~lqil~lrdndll~lpk-eig~lt~lrelhiqgnrl~v 187 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFEIL-PPDVGKL-TNLQILSLRDNDLLSLPK-EIGDLTRLRELHIQGNRLTV 187 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcccC-Chhhhhh-cceeEEeeccCchhhCcH-HHHHHHHHHHHhcccceeee
Confidence 998863 3356677788999999999999877 5566777 899999999999998885 48888999999999999999
Q ss_pred eCcC
Q psy15002 297 IEEG 300 (357)
Q Consensus 297 ~~~~ 300 (357)
+|++
T Consensus 188 lppe 191 (264)
T KOG0617|consen 188 LPPE 191 (264)
T ss_pred cChh
Confidence 9873
No 22
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.63 E-value=1.1e-17 Score=150.24 Aligned_cols=255 Identities=24% Similarity=0.217 Sum_probs=173.6
Q ss_pred EEEecCCCCcCcc-ccccCCC-cccEEEecCCCcceecCccccc---ccccceEEEccCCcCce------eChhhhcCCC
Q psy15002 94 YLKLRHNNLPKLT-GFIFFGL-DIRHLTIHNSSLAVVEESSLSS---IGKKLKRLNLGGNELTR------VPQTSLSKLE 162 (357)
Q Consensus 94 ~L~l~~~~i~~l~-~~~~~~~-~L~~L~l~~~~l~~~~~~~~~~---l~~~L~~L~ls~n~l~~------~~~~~~~~l~ 162 (357)
.|+|..+.++.-. ...+... +++.|.++++.++......+.. ..+++++|+++++.+.. .....+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666665211 2222222 6999999999885432222221 11459999999998773 1224577789
Q ss_pred CCcEEeccCCcccccc-CCCCCC---CCCCeEECCCCCCeeeC----ccccCCC-CcCceeecccccCccc----CcccC
Q psy15002 163 NLRKLELLHNRIALIE-EGDFEG---KALTQLDLSQNSLAVVP----SPALKSL-NHLLILNLNHNKISAL----HSNAF 229 (357)
Q Consensus 163 ~L~~L~l~~n~l~~~~-~~~~~~---~~L~~L~l~~n~l~~~~----~~~~~~l-~~L~~L~l~~n~l~~~----~~~~l 229 (357)
+|++|++++|.+.... ..+... ++|++|++++|.+.... ...+..+ ++|+.|++++|.++.. ....+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999986322 222222 45999999999987422 1234556 8999999999998732 13345
Q ss_pred CCCCCCCEEEccCCcCcccCC----CccccccccccEEEccCCcCcccCc----ccccCCCCCcEEEccCCcCceeCcCc
Q psy15002 230 QGLDTLEILTIFENKLSLIEP----DSFKGLEKKLKRLNLGGNELTRVPQ----TSLSKLENLRKLELLHNRIALIEEGD 301 (357)
Q Consensus 230 ~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~ 301 (357)
..+++|+.|++++|.++.... ..+... ++|+.|++++|.++.... ..+..+++|++|++++|.+++.....
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~-~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~ 240 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKAN-CNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAA 240 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhC-CCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHH
Confidence 677899999999999875321 223333 589999999999875432 24567889999999999988632222
Q ss_pred C-----CCCCCCCEeecCCCcCcccC----cccCCCCCCCcEEeCCCCcccccCccc
Q psy15002 302 F-----EGLHNLDSLVLAHNQLRTIP----PRVFAHLPLLNSLELDGNHIHTVDPAA 349 (357)
Q Consensus 302 ~-----~~~~~L~~L~L~~n~l~~~~----~~~~~~~~~L~~L~L~~N~l~~~~~~~ 349 (357)
+ ...+.|+.|++++|.+++.. ...+..+++|+.+++++|.+++-+...
T Consensus 241 l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~ 297 (319)
T cd00116 241 LASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQL 297 (319)
T ss_pred HHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHH
Confidence 2 12479999999999997211 123456689999999999998765443
No 23
>KOG1259|consensus
Probab=99.44 E-value=1.3e-14 Score=121.88 Aligned_cols=201 Identities=21% Similarity=0.248 Sum_probs=137.6
Q ss_pred ccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCC-CeeeCccccCCCCcCceeec
Q psy15002 138 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNS-LAVVPSPALKSLNHLLILNL 216 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l 216 (357)
++|+.+.+|.+.-..|-.- ...-|.|+.+.+.+..++..|.-+- ...+.-.....-. ...........+..|+++++
T Consensus 214 ~~l~~~~~s~~~~~~i~~~-~~~kptl~t~~v~~s~~~~~~~l~p-e~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDL 291 (490)
T KOG1259|consen 214 RNLKTLKFSALSTENIVDI-ELLKPTLQTICVHNTTIQDVPSLLP-ETILADPSGSEPSTSNGSALVSADTWQELTELDL 291 (490)
T ss_pred hhhheeeeeccchhheece-eecCchhheeeeecccccccccccc-hhhhcCccCCCCCccCCceEEecchHhhhhhccc
Confidence 5678888887765544321 2234667777777665554332211 1111111111100 01100112233457889999
Q ss_pred ccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCce
Q psy15002 217 NHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIAL 296 (357)
Q Consensus 217 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 296 (357)
++|.|+.+ .++..-.|.++.|++++|++..+.. +..+ ++|+.||+++|.++.+. ++-..+.++++|.+++|.+.+
T Consensus 292 S~N~I~~i-DESvKL~Pkir~L~lS~N~i~~v~n--La~L-~~L~~LDLS~N~Ls~~~-Gwh~KLGNIKtL~La~N~iE~ 366 (490)
T KOG1259|consen 292 SGNLITQI-DESVKLAPKLRRLILSQNRIRTVQN--LAEL-PQLQLLDLSGNLLAECV-GWHLKLGNIKTLKLAQNKIET 366 (490)
T ss_pred cccchhhh-hhhhhhccceeEEeccccceeeehh--hhhc-ccceEeecccchhHhhh-hhHhhhcCEeeeehhhhhHhh
Confidence 99998887 5567778899999999999988754 5666 78999999999988876 455678899999999999888
Q ss_pred eCcCcCCCCCCCCEeecCCCcCcccCc-ccCCCCCCCcEEeCCCCcccccCc
Q psy15002 297 IEEGDFEGLHNLDSLVLAHNQLRTIPP-RVFAHLPLLNSLELDGNHIHTVDP 347 (357)
Q Consensus 297 ~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~~ 347 (357)
+.. +..+-+|..||+++|+|..++. ..++++|.|+.+.|.+|+++++..
T Consensus 367 LSG--L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 367 LSG--LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhh--hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 754 5667889999999999987765 346889999999999999988754
No 24
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.39 E-value=5.3e-13 Score=123.52 Aligned_cols=199 Identities=34% Similarity=0.442 Sum_probs=111.7
Q ss_pred EEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCC-CCCeEECCCCCCeeeCccccCCCCcCceeeccccc
Q psy15002 142 RLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGK-ALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNK 220 (357)
Q Consensus 142 ~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 220 (357)
.++.+.+.+..-.. .+..++.++.|++.+|.++.+++...... +|+.|++++|++..++ ..+..+++|+.|++++|+
T Consensus 97 ~l~~~~~~~~~~~~-~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 97 SLDLNLNRLRSNIS-ELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeeccccccccCch-hhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhh-hhhhccccccccccCCch
Confidence 35555555422111 13444556666666666666666555553 6666666666666554 134556666666666666
Q ss_pred CcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcC
Q psy15002 221 ISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEG 300 (357)
Q Consensus 221 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 300 (357)
+..+++. ....+.|+.|++++|++..++... ... ..++++++++|.+...+ ..+..+..+..+.+.+|++..++.
T Consensus 175 l~~l~~~-~~~~~~L~~L~ls~N~i~~l~~~~-~~~-~~L~~l~~~~N~~~~~~-~~~~~~~~l~~l~l~~n~~~~~~~- 249 (394)
T COG4886 175 LSDLPKL-LSNLSNLNNLDLSGNKISDLPPEI-ELL-SALEELDLSNNSIIELL-SSLSNLKNLSGLELSNNKLEDLPE- 249 (394)
T ss_pred hhhhhhh-hhhhhhhhheeccCCccccCchhh-hhh-hhhhhhhhcCCcceecc-hhhhhcccccccccCCceeeeccc-
Confidence 6665432 124566666666666666664321 111 34666666666433333 134555666666666666655422
Q ss_pred cCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccCccc
Q psy15002 301 DFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPAA 349 (357)
Q Consensus 301 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~ 349 (357)
.++.+++++.|++++|+++.++. +....+++.|++++|.+..+++..
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 34455666777777777766666 456666777777776666554433
No 25
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.35 E-value=3.2e-13 Score=108.34 Aligned_cols=105 Identities=31% Similarity=0.500 Sum_probs=23.1
Q ss_pred CCCeEECCCCCCeeeCccccC-CCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEE
Q psy15002 186 ALTQLDLSQNSLAVVPSPALK-SLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLN 264 (357)
Q Consensus 186 ~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~ 264 (357)
++++|++++|+|+.|.. +. .+.+|+.|++++|.++.+. .+..+++|++|++++|+++.+.......+ ++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~Ie~--L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~l-p~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTIEN--LGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNL-PNLQELY 94 (175)
T ss_dssp ----------------S----TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH--TT--EEE
T ss_pred ccccccccccccccccc--hhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhC-CcCCEEE
Confidence 44555555555555432 22 3445555555555555542 24445555555555555554422111122 4455555
Q ss_pred ccCCcCcccCc-ccccCCCCCcEEEccCCcCc
Q psy15002 265 LGGNELTRVPQ-TSLSKLENLRKLELLHNRIA 295 (357)
Q Consensus 265 l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~ 295 (357)
+++|++..+.. ..+..+++|+.|++.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 55555544321 12333444444444444444
No 26
>KOG3207|consensus
Probab=99.33 E-value=1.4e-13 Score=121.03 Aligned_cols=86 Identities=27% Similarity=0.370 Sum_probs=36.2
Q ss_pred ccccEEEccCCcCcccCcc-cccCCCCCcEEEccCCcCceeCcCcC------CCCCCCCEeecCCCcCcccCc-ccCCCC
Q psy15002 258 KKLKRLNLGGNELTRVPQT-SLSKLENLRKLELLHNRIALIEEGDF------EGLHNLDSLVLAHNQLRTIPP-RVFAHL 329 (357)
Q Consensus 258 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~------~~~~~L~~L~L~~n~l~~~~~-~~~~~~ 329 (357)
..|++|||++|.+-..+.. ....++.|+.|+++.+.+.++..... ..+++|+.|++..|+++.++. ..+..+
T Consensus 246 ~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l 325 (505)
T KOG3207|consen 246 QTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTL 325 (505)
T ss_pred hHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhcc
Confidence 3455555555544433311 12344445555555554444322111 223455555555555544443 111223
Q ss_pred CCCcEEeCCCCccc
Q psy15002 330 PLLNSLELDGNHIH 343 (357)
Q Consensus 330 ~~L~~L~L~~N~l~ 343 (357)
++|+.+.+..|.++
T Consensus 326 ~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 326 ENLKHLRITLNYLN 339 (505)
T ss_pred chhhhhhccccccc
Confidence 44444444444443
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.33 E-value=6.9e-13 Score=106.44 Aligned_cols=128 Identities=30% Similarity=0.388 Sum_probs=38.7
Q ss_pred cCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEE
Q psy15002 159 SKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEIL 238 (357)
Q Consensus 159 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 238 (357)
.+..++++|+|++|.|+.+..-...+.+|+.|++++|.++.+. .+..++.|++|++++|+++.+.......+++|+.|
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l~--~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKLE--GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T--T----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred ccccccccccccccccccccchhhhhcCCCEEECCCCCCcccc--CccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 3444555566666665555321112355666666666666554 35556667777777777666643222345667777
Q ss_pred EccCCcCcccCC-CccccccccccEEEccCCcCcccCc---ccccCCCCCcEEEc
Q psy15002 239 TIFENKLSLIEP-DSFKGLEKKLKRLNLGGNELTRVPQ---TSLSKLENLRKLEL 289 (357)
Q Consensus 239 ~L~~n~l~~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l 289 (357)
++++|+|..+.. ..+..+ ++|+.|++.+|.++..+. ..+..+|+|+.||-
T Consensus 94 ~L~~N~I~~l~~l~~L~~l-~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSL-PKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp E-TTS---SCCCCGGGGG--TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred ECcCCcCCChHHhHHHHcC-CCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 777776665533 233444 677777777777665432 12345566666654
No 28
>KOG0532|consensus
Probab=99.32 E-value=4.8e-14 Score=127.79 Aligned_cols=197 Identities=23% Similarity=0.281 Sum_probs=165.3
Q ss_pred EEEEecCCCCcCccccccCCC--cccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEecc
Q psy15002 93 FYLKLRHNNLPKLTGFIFFGL--DIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELL 170 (357)
Q Consensus 93 ~~L~l~~~~i~~l~~~~~~~~--~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 170 (357)
-+|.|++..+...|...+..- .....+++.|++..++..+... ..|+.+.+..|.+..++. .+.++..|++|+++
T Consensus 53 g~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f--~~Le~liLy~n~~r~ip~-~i~~L~~lt~l~ls 129 (722)
T KOG0532|consen 53 GRLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAF--VSLESLILYHNCIRTIPE-AICNLEALTFLDLS 129 (722)
T ss_pred cccccccchhhcCCCccccccccchhhhhccccccccCchHHHHH--HHHHHHHHHhccceecch-hhhhhhHHHHhhhc
Confidence 367888888888887776521 4578888999998887654332 458999999999999886 48999999999999
Q ss_pred CCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCC
Q psy15002 171 HNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEP 250 (357)
Q Consensus 171 ~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 250 (357)
.|+++.+|..++.++ |+.|-+++|+++.++. .++....|..|+.+.|.+..+++ .+.++.+|+.|.+.+|++..+++
T Consensus 130 ~NqlS~lp~~lC~lp-Lkvli~sNNkl~~lp~-~ig~~~tl~~ld~s~nei~slps-ql~~l~slr~l~vrRn~l~~lp~ 206 (722)
T KOG0532|consen 130 SNQLSHLPDGLCDLP-LKVLIVSNNKLTSLPE-EIGLLPTLAHLDVSKNEIQSLPS-QLGYLTSLRDLNVRRNHLEDLPE 206 (722)
T ss_pred cchhhcCChhhhcCc-ceeEEEecCccccCCc-ccccchhHHHhhhhhhhhhhchH-HhhhHHHHHHHHHhhhhhhhCCH
Confidence 999999999988764 8999999999999987 45578899999999999998854 57889999999999999998854
Q ss_pred CccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCc
Q psy15002 251 DSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEE 299 (357)
Q Consensus 251 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 299 (357)
.+..+ .|..||+++|++..+|. .|..|..|++|-|.+|.+++-|+
T Consensus 207 -El~~L--pLi~lDfScNkis~iPv-~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 207 -ELCSL--PLIRLDFSCNKISYLPV-DFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred -HHhCC--ceeeeecccCceeecch-hhhhhhhheeeeeccCCCCCChH
Confidence 44465 59999999999999985 58999999999999999987655
No 29
>KOG3207|consensus
Probab=99.31 E-value=3.8e-13 Score=118.43 Aligned_cols=228 Identities=21% Similarity=0.222 Sum_probs=163.3
Q ss_pred EEEEEecCCCCcCccccccCC----C-cccEEEecCCCcceecCcccccccccceEEEccCCcCceeCh--hhhcCCCCC
Q psy15002 92 IFYLKLRHNNLPKLTGFIFFG----L-DIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQ--TSLSKLENL 164 (357)
Q Consensus 92 l~~L~l~~~~i~~l~~~~~~~----~-~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~--~~~~~l~~L 164 (357)
...+.+++-.++.+..+.... . +|+.+.+.++.+............++++.||++.|-+....+ .....+|+|
T Consensus 95 ~~~~si~nK~vE~iGfDki~akQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~L 174 (505)
T KOG3207|consen 95 ESVLSISNKQVEFIGFDKIAAKQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSL 174 (505)
T ss_pred hhHhhhcCceeEEecHHHHHHHhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccc
Confidence 345566666666665543322 2 689999999988776643333333689999999998876432 335789999
Q ss_pred cEEeccCCccccccCCCC--CCCCCCeEECCCCCCeeeCc-cccCCCCcCceeecccccCcccCcccCCCCCCCCEEEcc
Q psy15002 165 RKLELLHNRIALIEEGDF--EGKALTQLDLSQNSLAVVPS-PALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIF 241 (357)
Q Consensus 165 ~~L~l~~n~l~~~~~~~~--~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~ 241 (357)
+.|+++.|++........ ..+.|+.|.++.|.++.-.. .....+|+|+.|++..|....+......-+..|+.|+|+
T Consensus 175 e~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs 254 (505)
T KOG3207|consen 175 ENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLS 254 (505)
T ss_pred hhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhcccc
Confidence 999999999875433332 23889999999999984332 234568999999999996444434445556789999999
Q ss_pred CCcCcccCCC-ccccccccccEEEccCCcCcccCcccc------cCCCCCcEEEccCCcCceeCc-CcCCCCCCCCEeec
Q psy15002 242 ENKLSLIEPD-SFKGLEKKLKRLNLGGNELTRVPQTSL------SKLENLRKLELLHNRIALIEE-GDFEGLHNLDSLVL 313 (357)
Q Consensus 242 ~n~l~~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~------~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~L 313 (357)
+|.+-..+.. ..+.+ +.|..|+++.+.+.++..... ..+++|++|++..|++.+++. ..+..+++|+.|..
T Consensus 255 ~N~li~~~~~~~~~~l-~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~ 333 (505)
T KOG3207|consen 255 NNNLIDFDQGYKVGTL-PGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRI 333 (505)
T ss_pred CCcccccccccccccc-cchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhc
Confidence 9998776543 33445 899999999999987643222 457899999999999988754 23444677888888
Q ss_pred CCCcCcc
Q psy15002 314 AHNQLRT 320 (357)
Q Consensus 314 ~~n~l~~ 320 (357)
..|.+..
T Consensus 334 ~~n~ln~ 340 (505)
T KOG3207|consen 334 TLNYLNK 340 (505)
T ss_pred ccccccc
Confidence 8887763
No 30
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.31 E-value=2.3e-12 Score=119.23 Aligned_cols=172 Identities=35% Similarity=0.488 Sum_probs=76.5
Q ss_pred ceEEEccCCcCceeChhhhcCCC-CCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeeccc
Q psy15002 140 LKRLNLGGNELTRVPQTSLSKLE-NLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNH 218 (357)
Q Consensus 140 L~~L~ls~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 218 (357)
++.|++.+|.++.+++. ...+. +|+.|++++|.+..++..+...++|+.|++++|++..++.. ....++|+.|++++
T Consensus 118 l~~L~l~~n~i~~i~~~-~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l~~~-~~~~~~L~~L~ls~ 195 (394)
T COG4886 118 LTSLDLDNNNITDIPPL-IGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDLPKL-LSNLSNLNNLDLSG 195 (394)
T ss_pred eeEEecCCcccccCccc-cccchhhcccccccccchhhhhhhhhccccccccccCCchhhhhhhh-hhhhhhhhheeccC
Confidence 45555555555554432 22231 45555555555555544444445555555555555544431 11344455555555
Q ss_pred ccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeC
Q psy15002 219 NKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIE 298 (357)
Q Consensus 219 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 298 (357)
|++..++.. ......|+++.+++|++... +..+... .++..+.+.+|++..++ ..+..++.+++|++++|.++.++
T Consensus 196 N~i~~l~~~-~~~~~~L~~l~~~~N~~~~~-~~~~~~~-~~l~~l~l~~n~~~~~~-~~~~~l~~l~~L~~s~n~i~~i~ 271 (394)
T COG4886 196 NKISDLPPE-IELLSALEELDLSNNSIIEL-LSSLSNL-KNLSGLELSNNKLEDLP-ESIGNLSNLETLDLSNNQISSIS 271 (394)
T ss_pred CccccCchh-hhhhhhhhhhhhcCCcceec-chhhhhc-ccccccccCCceeeecc-chhccccccceeccccccccccc
Confidence 555544332 11222355555555532222 1222222 34444444444444332 22444444555555555555554
Q ss_pred cCcCCCCCCCCEeecCCCcCc
Q psy15002 299 EGDFEGLHNLDSLVLAHNQLR 319 (357)
Q Consensus 299 ~~~~~~~~~L~~L~L~~n~l~ 319 (357)
. +....+++.|++++|.+.
T Consensus 272 ~--~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 272 S--LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred c--ccccCccCEEeccCcccc
Confidence 4 344455555555555444
No 31
>KOG0532|consensus
Probab=99.29 E-value=9.7e-14 Score=125.86 Aligned_cols=215 Identities=27% Similarity=0.386 Sum_probs=169.6
Q ss_pred EEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCC
Q psy15002 117 HLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNS 196 (357)
Q Consensus 117 ~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 196 (357)
.|.|++-++...+-.++.--.......|++.|.+..++.. +..+..|+.+.+..|.+..+|..+..+..|.+++++.|+
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~-~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEE-ACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccccCchH-HHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccch
Confidence 4555666666665554442224467889999999998875 677788999999999999999999999999999999999
Q ss_pred CeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcc
Q psy15002 197 LAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQT 276 (357)
Q Consensus 197 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 276 (357)
++..+.. +..++ |+.|.+++|+++.++. .++....|..||.+.|.+..+ +..+..+ .+++.|.+..|++..++++
T Consensus 133 lS~lp~~-lC~lp-Lkvli~sNNkl~~lp~-~ig~~~tl~~ld~s~nei~sl-psql~~l-~slr~l~vrRn~l~~lp~E 207 (722)
T KOG0532|consen 133 LSHLPDG-LCDLP-LKVLIVSNNKLTSLPE-EIGLLPTLAHLDVSKNEIQSL-PSQLGYL-TSLRDLNVRRNHLEDLPEE 207 (722)
T ss_pred hhcCChh-hhcCc-ceeEEEecCccccCCc-ccccchhHHHhhhhhhhhhhc-hHHhhhH-HHHHHHHHhhhhhhhCCHH
Confidence 9988863 44455 8999999999998854 466888999999999999887 4455566 7899999999999999875
Q ss_pred cccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccC--CCCCCCcEEeCCCC
Q psy15002 277 SLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVF--AHLPLLNSLELDGN 340 (357)
Q Consensus 277 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~--~~~~~L~~L~L~~N 340 (357)
+..+ .|..|+++.|++..+|. .|.+++.|++|-|.+|.+.+-|..+. +...-.++|+..-+
T Consensus 208 -l~~L-pLi~lDfScNkis~iPv-~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 208 -LCSL-PLIRLDFSCNKISYLPV-DFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred -HhCC-ceeeeecccCceeecch-hhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhc
Confidence 4444 58889999999999987 68889999999999999998776432 23344567776665
No 32
>KOG1259|consensus
Probab=99.28 E-value=6e-13 Score=112.03 Aligned_cols=200 Identities=23% Similarity=0.249 Sum_probs=136.0
Q ss_pred cccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccc--cccCCCCCCCCCCeEE
Q psy15002 114 DIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIA--LIEEGDFEGKALTQLD 191 (357)
Q Consensus 114 ~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~~~L~~L~ 191 (357)
+|+.+.++.+.-..|.+-.... +.|+++.+.+..+...+. +-....+....-+.-... .+-..+-....|+++|
T Consensus 215 ~l~~~~~s~~~~~~i~~~~~~k--ptl~t~~v~~s~~~~~~~--l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelD 290 (490)
T KOG1259|consen 215 NLKTLKFSALSTENIVDIELLK--PTLQTICVHNTTIQDVPS--LLPETILADPSGSEPSTSNGSALVSADTWQELTELD 290 (490)
T ss_pred hhheeeeeccchhheeceeecC--chhheeeeeccccccccc--ccchhhhcCccCCCCCccCCceEEecchHhhhhhcc
Confidence 7788888888766554333222 568899888887765442 222222222111111110 1111112225688888
Q ss_pred CCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCc
Q psy15002 192 LSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELT 271 (357)
Q Consensus 192 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 271 (357)
+++|.|+.+.. ...-.|.++.|++++|.+..+.. +..+++|+.|||++|.++.+... -..+ .+++.|.+++|.+.
T Consensus 291 LS~N~I~~iDE-SvKL~Pkir~L~lS~N~i~~v~n--La~L~~L~~LDLS~N~Ls~~~Gw-h~KL-GNIKtL~La~N~iE 365 (490)
T KOG1259|consen 291 LSGNLITQIDE-SVKLAPKLRRLILSQNRIRTVQN--LAELPQLQLLDLSGNLLAECVGW-HLKL-GNIKTLKLAQNKIE 365 (490)
T ss_pred ccccchhhhhh-hhhhccceeEEeccccceeeehh--hhhcccceEeecccchhHhhhhh-Hhhh-cCEeeeehhhhhHh
Confidence 88888888775 45566888899999998887743 77788999999999988877432 2234 68889999999888
Q ss_pred ccCcccccCCCCCcEEEccCCcCceeCc-CcCCCCCCCCEeecCCCcCcccCcc
Q psy15002 272 RVPQTSLSKLENLRKLELLHNRIALIEE-GDFEGLHNLDSLVLAHNQLRTIPPR 324 (357)
Q Consensus 272 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~~ 324 (357)
.+. .+..+.+|..|++.+|+|+.... ..++++|-|+.+.|.+|.+..++.+
T Consensus 366 ~LS--GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 366 TLS--GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred hhh--hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 765 36777888999999999887654 3567788899999999999887753
No 33
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.17 E-value=2.4e-11 Score=80.44 Aligned_cols=61 Identities=39% Similarity=0.692 Sum_probs=39.5
Q ss_pred CCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcc
Q psy15002 282 ENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHI 342 (357)
Q Consensus 282 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l 342 (357)
|+|++|++++|+++.+++..|.++++|+.|++++|+++.+++..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3556666666666666666666666666666666666666666666666666666666654
No 34
>KOG0531|consensus
Probab=99.14 E-value=4.1e-12 Score=117.96 Aligned_cols=215 Identities=32% Similarity=0.429 Sum_probs=137.4
Q ss_pred cccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECC
Q psy15002 114 DIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLS 193 (357)
Q Consensus 114 ~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~ 193 (357)
.++.+.+..|.+..+.. .+..+ ++|+.|++.+|.|..+... +..+++|++|++++|.|+.+.. +..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~~~~-~l~~~-~~l~~l~l~~n~i~~i~~~-l~~~~~L~~L~ls~N~I~~i~~-l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAKILN-HLSKL-KSLEALDLYDNKIEKIENL-LSSLVNLQVLDLSFNKITKLEG-LSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhhhhc-ccccc-cceeeeeccccchhhcccc-hhhhhcchheeccccccccccc-hhhccchhhheec
Confidence 45556666666665221 12222 5688888888888777542 5667788888888888876643 3333557788888
Q ss_pred CCCCeeeCccccCCCCcCceeecccccCcccCc-ccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcc
Q psy15002 194 QNSLAVVPSPALKSLNHLLILNLNHNKISALHS-NAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTR 272 (357)
Q Consensus 194 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 272 (357)
+|.+..+.. +..+++|+.+++++|.+..+.. . ...+.+++.+++.+|.+..+..... . ..+..+++..|.++.
T Consensus 149 ~N~i~~~~~--~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~~~~--~-~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 149 GNLISDISG--LESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEGLDL--L-KKLVLLSLLDNKISK 222 (414)
T ss_pred cCcchhccC--CccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccchHH--H-HHHHHhhccccccee
Confidence 888877763 4457777888888887777654 2 3566777777888877766543222 1 344555777777766
Q ss_pred cCcccccCCCC--CcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCccc
Q psy15002 273 VPQTSLSKLEN--LRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIH 343 (357)
Q Consensus 273 ~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~ 343 (357)
+.. +..+.. |+.+++++|.+..++ ..+..+..+..+++..|++..... +...+.+..+....|++.
T Consensus 223 ~~~--l~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 223 LEG--LNELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKLA 290 (414)
T ss_pred ccC--cccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccccccc--ccccchHHHhccCcchhc
Confidence 553 223333 778888888877764 234456778888888887776654 334455666666666554
No 35
>KOG0531|consensus
Probab=99.12 E-value=7.7e-12 Score=116.17 Aligned_cols=245 Identities=31% Similarity=0.385 Sum_probs=178.1
Q ss_pred EEEEEecCCCCcCccccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeChhhhcCCCCCcEEeccC
Q psy15002 92 IFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLH 171 (357)
Q Consensus 92 l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~ 171 (357)
+..++++.|.+..+-...-...+++.+++.+|.+..+... +..+ .+|++|++++|.|+.+.. +..++.|+.|++++
T Consensus 74 l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~-l~~~-~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 74 LKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENL-LSSL-VNLQVLDLSFNKITKLEG--LSTLTLLKELNLSG 149 (414)
T ss_pred HHhhccchhhhhhhhcccccccceeeeeccccchhhcccc-hhhh-hcchheeccccccccccc--hhhccchhhheecc
Confidence 4455677777776433333444789999999999988752 2233 579999999999999875 77888899999999
Q ss_pred CccccccCCCCCCCCCCeEECCCCCCeeeCc-cccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCC
Q psy15002 172 NRIALIEEGDFEGKALTQLDLSQNSLAVVPS-PALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEP 250 (357)
Q Consensus 172 n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 250 (357)
|.|+.+...-. .+.|+.+++++|.+..+.. . ...+.+++.+.+.+|.+..+.. +..+..+..+++..|.++.+.+
T Consensus 150 N~i~~~~~~~~-l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~--~~~~~~l~~~~l~~n~i~~~~~ 225 (414)
T KOG0531|consen 150 NLISDISGLES-LKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG--LDLLKKLVLLSLLDNKISKLEG 225 (414)
T ss_pred CcchhccCCcc-chhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc--hHHHHHHHHhhcccccceeccC
Confidence 99998765332 6889999999999998876 2 4677889999999998877643 3444556666888888887744
Q ss_pred CccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcc----cCcccC
Q psy15002 251 DSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRT----IPPRVF 326 (357)
Q Consensus 251 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~----~~~~~~ 326 (357)
...... ..|+.+++++|.+...+ ..+..+..+..|++..|.+..+.. +...+.+..+.+..|++.. ......
T Consensus 226 l~~~~~-~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (414)
T KOG0531|consen 226 LNELVM-LHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKLALSEAISQEYIT 301 (414)
T ss_pred cccchh-HHHHHHhcccCcccccc-ccccccccccccchhhcccccccc--ccccchHHHhccCcchhcchhhhhccccc
Confidence 222111 13889999999988774 236667888899999998887755 3346677777888887662 222224
Q ss_pred CCCCCCcEEeCCCCcccccCcc
Q psy15002 327 AHLPLLNSLELDGNHIHTVDPA 348 (357)
Q Consensus 327 ~~~~~L~~L~L~~N~l~~~~~~ 348 (357)
...+.+..+.+.+|++....+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 302 SAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred cccccccccccccCcccccccc
Confidence 5667888999999988776543
No 36
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.11 E-value=7.9e-11 Score=77.96 Aligned_cols=61 Identities=39% Similarity=0.588 Sum_probs=50.4
Q ss_pred ccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcC
Q psy15002 258 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQL 318 (357)
Q Consensus 258 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l 318 (357)
++|+.|++++|+++.+++..|..+++|++|++++|.++.+++.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3678888888888888877888888888888888888888888888888888888888865
No 37
>KOG1909|consensus
Probab=99.11 E-value=3e-12 Score=109.91 Aligned_cols=241 Identities=22% Similarity=0.247 Sum_probs=107.3
Q ss_pred ceEEEEEecCCCCcCc-----cccccCCCcccEEEecCCCcceecC----------cccccccccceEEEccCCcCceeC
Q psy15002 90 LIIFYLKLRHNNLPKL-----TGFIFFGLDIRHLTIHNSSLAVVEE----------SSLSSIGKKLKRLNLGGNELTRVP 154 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l-----~~~~~~~~~L~~L~l~~~~l~~~~~----------~~~~~l~~~L~~L~ls~n~l~~~~ 154 (357)
..+++|++++|.+..= ....-...+|+..++++-....... .++.+. ++|++|+||+|.+..-.
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~-~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGC-PKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcC-CceeEeeccccccCccc
Confidence 5677888888887542 2222222255666655532222111 111112 25666666666554321
Q ss_pred h----hhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccC----c
Q psy15002 155 Q----TSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALH----S 226 (357)
Q Consensus 155 ~----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----~ 226 (357)
. ..+..+..|++|.+.+|.+......... ..|..|. .......-++|+++...+|++..-+ .
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~-~al~~l~---------~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A 178 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG-RALFELA---------VNKKAASKPKLRVFICGRNRLENGGATALA 178 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH-HHHHHHH---------HHhccCCCcceEEEEeeccccccccHHHHH
Confidence 1 1234456666666666655421111100 0000000 0001122344555555555443321 1
Q ss_pred ccCCCCCCCCEEEccCCcCcccCC----CccccccccccEEEccCCcCcccC----cccccCCCCCcEEEccCCcCceeC
Q psy15002 227 NAFQGLDTLEILTIFENKLSLIEP----DSFKGLEKKLKRLNLGGNELTRVP----QTSLSKLENLRKLELLHNRIALIE 298 (357)
Q Consensus 227 ~~l~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~ 298 (357)
..|...+.|+.+.++.|+|..-.. ..|... +.|+.||+.+|-++.-. ..+++.+++|++|++++|.++.-.
T Consensus 179 ~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~-~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~G 257 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHC-PHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEG 257 (382)
T ss_pred HHHHhccccceEEEecccccCchhHHHHHHHHhC-CcceeeecccchhhhHHHHHHHHHhcccchheeeccccccccccc
Confidence 233344555555555555432111 223333 45555555555554321 123445556666666666555433
Q ss_pred cCcC-----CCCCCCCEeecCCCcCcccC----cccCCCCCCCcEEeCCCCcc
Q psy15002 299 EGDF-----EGLHNLDSLVLAHNQLRTIP----PRVFAHLPLLNSLELDGNHI 342 (357)
Q Consensus 299 ~~~~-----~~~~~L~~L~L~~n~l~~~~----~~~~~~~~~L~~L~L~~N~l 342 (357)
..++ ...++|+.+.+.+|.++.-. ......-+.|.+|+|++|.+
T Consensus 258 a~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 258 AIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 3222 22456666666666665211 11122345666666666666
No 38
>KOG1909|consensus
Probab=99.01 E-value=4.6e-11 Score=102.68 Aligned_cols=206 Identities=23% Similarity=0.252 Sum_probs=145.9
Q ss_pred ccceEEEccCCcCce----eChhhhcCCCCCcEEeccCCcc----ccccCC-------CCCCCCCCeEECCCCCCeeeCc
Q psy15002 138 KKLKRLNLGGNELTR----VPQTSLSKLENLRKLELLHNRI----ALIEEG-------DFEGKALTQLDLSQNSLAVVPS 202 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~----~~~~~~~~l~~L~~L~l~~n~l----~~~~~~-------~~~~~~L~~L~l~~n~l~~~~~ 202 (357)
.+++++++|+|.+.. .....+.+.++|+..++++--. ..+|+. +...++|++|+||+|.+..-..
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 468888888887764 2223466777888888775421 233332 2223689999999998764332
Q ss_pred c----ccCCCCcCceeecccccCcccCccc-------------CCCCCCCCEEEccCCcCcccCC----Ccccccccccc
Q psy15002 203 P----ALKSLNHLLILNLNHNKISALHSNA-------------FQGLDTLEILTIFENKLSLIEP----DSFKGLEKKLK 261 (357)
Q Consensus 203 ~----~~~~l~~L~~L~l~~n~l~~~~~~~-------------l~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~~L~ 261 (357)
. .++++..|++|.|.+|.+....... ...-+.|+.+...+|++..-+. ..|... +.++
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~-~~le 188 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSH-PTLE 188 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhc-cccc
Confidence 2 3456788999999999876543222 3445799999999999876543 334444 6899
Q ss_pred EEEccCCcCcccC----cccccCCCCCcEEEccCCcCceeC----cCcCCCCCCCCEeecCCCcCcccCcc-----cCCC
Q psy15002 262 RLNLGGNELTRVP----QTSLSKLENLRKLELLHNRIALIE----EGDFEGLHNLDSLVLAHNQLRTIPPR-----VFAH 328 (357)
Q Consensus 262 ~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~L~L~~n~l~~~~~~-----~~~~ 328 (357)
.+.+..|.+..-. ...+..+++|+.|++..|-++.-. ...++.+++|+.|++++|.++.--.. .-..
T Consensus 189 evr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~ 268 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKES 268 (382)
T ss_pred eEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhcc
Confidence 9999999886422 245778999999999999887643 34667789999999999999853332 2234
Q ss_pred CCCCcEEeCCCCcccc
Q psy15002 329 LPLLNSLELDGNHIHT 344 (357)
Q Consensus 329 ~~~L~~L~L~~N~l~~ 344 (357)
.|+|+.+++.+|.++.
T Consensus 269 ~p~L~vl~l~gNeIt~ 284 (382)
T KOG1909|consen 269 APSLEVLELAGNEITR 284 (382)
T ss_pred CCCCceeccCcchhHH
Confidence 7899999999998864
No 39
>KOG4658|consensus
Probab=98.85 E-value=2.4e-09 Score=106.71 Aligned_cols=128 Identities=25% Similarity=0.310 Sum_probs=97.7
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCC--cceecCcccccccccceEEEccCC-cCceeChhhhcCCCCCcE
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSS--LAVVEESSLSSIGKKLKRLNLGGN-ELTRVPQTSLSKLENLRK 166 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~--l~~~~~~~~~~l~~~L~~L~ls~n-~l~~~~~~~~~~l~~L~~ 166 (357)
..++.+.+-+|.+..++...-.. ++++|-+..|. +..+....|..+ +.|++||+++| .+..+|. .++++-+|++
T Consensus 523 ~~~rr~s~~~~~~~~~~~~~~~~-~L~tLll~~n~~~l~~is~~ff~~m-~~LrVLDLs~~~~l~~LP~-~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGSSENP-KLRTLLLQRNSDWLLEISGEFFRSL-PLLRVLDLSGNSSLSKLPS-SIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchhhccCCCCCC-ccceEEEeecchhhhhcCHHHHhhC-cceEEEECCCCCccCcCCh-HHhhhhhhhc
Confidence 45677778788877766654433 68888888886 677777777777 56999999976 4556654 5888889999
Q ss_pred EeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeeccccc
Q psy15002 167 LELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNK 220 (357)
Q Consensus 167 L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 220 (357)
|+++++.+..+|.++..+..|.+|++..+......++....+.+|++|.+....
T Consensus 600 L~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 999999999999888888889999998876655556666678888888887654
No 40
>PLN03150 hypothetical protein; Provisional
Probab=98.75 E-value=1.4e-08 Score=98.87 Aligned_cols=84 Identities=25% Similarity=0.296 Sum_probs=39.3
Q ss_pred CCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecC
Q psy15002 235 LEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLA 314 (357)
Q Consensus 235 L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~ 314 (357)
++.|+|++|.+++..+..+..+ ++|+.|++++|.+.+..+..+..+++|+.|++++|++++..+..++++++|+.|+|+
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L-~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKL-RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCC-CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 3444444444444444444444 445555555554443333334444455555555555444444444444455555555
Q ss_pred CCcCc
Q psy15002 315 HNQLR 319 (357)
Q Consensus 315 ~n~l~ 319 (357)
+|+++
T Consensus 499 ~N~l~ 503 (623)
T PLN03150 499 GNSLS 503 (623)
T ss_pred CCccc
Confidence 55444
No 41
>PLN03150 hypothetical protein; Provisional
Probab=98.72 E-value=2.7e-08 Score=96.85 Aligned_cols=93 Identities=27% Similarity=0.364 Sum_probs=65.5
Q ss_pred ccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCC
Q psy15002 260 LKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDG 339 (357)
Q Consensus 260 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~ 339 (357)
++.|+|++|.+.+..+..+..+++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..+..+.++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 66777777777765555677777777777777777765555666777777777777777765555567777777777777
Q ss_pred CcccccCcccccC
Q psy15002 340 NHIHTVDPAAFSG 352 (357)
Q Consensus 340 N~l~~~~~~~~~~ 352 (357)
|++++..|..+..
T Consensus 500 N~l~g~iP~~l~~ 512 (623)
T PLN03150 500 NSLSGRVPAALGG 512 (623)
T ss_pred CcccccCChHHhh
Confidence 7777766665543
No 42
>KOG1859|consensus
Probab=98.69 E-value=2.6e-10 Score=106.78 Aligned_cols=197 Identities=28% Similarity=0.307 Sum_probs=85.3
Q ss_pred ccceEEEccCCcCceeC-hhhhcCCCCCcEEeccCCccccccCCCCCC-CCCCeEECCCCC--CeeeC---ccccCC---
Q psy15002 138 KKLKRLNLGGNELTRVP-QTSLSKLENLRKLELLHNRIALIEEGDFEG-KALTQLDLSQNS--LAVVP---SPALKS--- 207 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~n~--l~~~~---~~~~~~--- 207 (357)
++++.|.+-...-.+-. +-.+..+.+|++|.+.++.+.+.- ++... .+|++|-..+.- +.++. .+.+.+
T Consensus 84 qkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~~~-GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~ 162 (1096)
T KOG1859|consen 84 QKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLSTAK-GLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPV 162 (1096)
T ss_pred hhheeeeecccCCCCCCCCceeccccceeeEEecCcchhhhh-hhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchh
Confidence 45566655544322211 233566788999999998876521 22111 334433322210 00000 000110
Q ss_pred CCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEE
Q psy15002 208 LNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKL 287 (357)
Q Consensus 208 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 287 (357)
...|...+.++|.+..+ ..++.-++.|+.|+|++|+++..+ .+..+ ++|+.||+++|.+..++.-....+ +|+.|
T Consensus 163 Wn~L~~a~fsyN~L~~m-D~SLqll~ale~LnLshNk~~~v~--~Lr~l-~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L 237 (1096)
T KOG1859|consen 163 WNKLATASFSYNRLVLM-DESLQLLPALESLNLSHNKFTKVD--NLRRL-PKLKHLDLSYNCLRHVPQLSMVGC-KLQLL 237 (1096)
T ss_pred hhhHhhhhcchhhHHhH-HHHHHHHHHhhhhccchhhhhhhH--HHHhc-ccccccccccchhccccccchhhh-hheee
Confidence 12344444455544433 233444445555555555554442 33333 455555555555554442222222 25555
Q ss_pred EccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCc-ccCCCCCCCcEEeCCCCcc
Q psy15002 288 ELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPP-RVFAHLPLLNSLELDGNHI 342 (357)
Q Consensus 288 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~L~~N~l 342 (357)
.+.+|.++.+.. +.++.+|+.||+++|-|.+... ..+..+..|+.|.|.||++
T Consensus 238 ~lrnN~l~tL~g--ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 238 NLRNNALTTLRG--IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred eecccHHHhhhh--HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 555555544432 2334555555555554443221 1123334445555555544
No 43
>KOG1859|consensus
Probab=98.68 E-value=4.1e-10 Score=105.47 Aligned_cols=179 Identities=26% Similarity=0.301 Sum_probs=80.9
Q ss_pred cccccCCCcccEEEecCCCcceecCcccccccccceEEEccCCcCceeC---h---hhhcC---CCCCcEEeccCCcccc
Q psy15002 106 TGFIFFGLDIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNELTRVP---Q---TSLSK---LENLRKLELLHNRIAL 176 (357)
Q Consensus 106 ~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~~~~---~---~~~~~---l~~L~~L~l~~n~l~~ 176 (357)
|-.+|....|++|.+.++.+.... .+..+-.+|++|..++. +..+. . +.+.+ ...|...+.+.|+++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~--GL~~lr~qLe~LIC~~S-l~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~~ 178 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAK--GLQELRHQLEKLICHNS-LDALRHVFASCGGDISNSPVWNKLATASFSYNRLVL 178 (1096)
T ss_pred CceeccccceeeEEecCcchhhhh--hhHHHHHhhhhhhhhcc-HHHHHHHHHHhccccccchhhhhHhhhhcchhhHHh
Confidence 555666667888888888776522 11222234555544332 11110 0 00000 1234455555555555
Q ss_pred ccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccc
Q psy15002 177 IEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGL 256 (357)
Q Consensus 177 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~ 256 (357)
+...+--++.++.|+|+.|+++.+. .+..++.|++||+++|.+..++.-...++ +|+.|.+++|.++.+- .+.++
T Consensus 179 mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL~--gie~L 253 (1096)
T KOG1859|consen 179 MDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTLR--GIENL 253 (1096)
T ss_pred HHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhhh--hHHhh
Confidence 5444444455555555555555443 34455555555555555554432222222 2555555555444331 12233
Q ss_pred cccccEEEccCCcCcccCc-ccccCCCCCcEEEccCCc
Q psy15002 257 EKKLKRLNLGGNELTRVPQ-TSLSKLENLRKLELLHNR 293 (357)
Q Consensus 257 ~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~ 293 (357)
.+|..||+++|-+.+... ..++.+..|+.|+|.||.
T Consensus 254 -ksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNP 290 (1096)
T KOG1859|consen 254 -KSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNP 290 (1096)
T ss_pred -hhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCc
Confidence 344555555554433211 112334444555555554
No 44
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.62 E-value=1.8e-07 Score=72.07 Aligned_cols=121 Identities=21% Similarity=0.382 Sum_probs=42.1
Q ss_pred cCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCC
Q psy15002 228 AFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHN 307 (357)
Q Consensus 228 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 307 (357)
+|.++++|+.+.+.. .+..+....|... ++++.+.+.++ +..+....|..+++++.+.+.+ .+..++...|..+++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~-~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNC-TSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT--TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhcccc-ccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 334444444444432 3334444444433 34444444432 4444444444444445555433 444444444444555
Q ss_pred CCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccCcccccCccc
Q psy15002 308 LDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPAAFSGLEA 355 (357)
Q Consensus 308 L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 355 (357)
|+.+++..+ +..++...|.++ .++.+.+.+ .++.++...|.++++
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~ 127 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTK 127 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG----
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCcccccccc
Confidence 555555443 444444445544 555555543 444555555555443
No 45
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.61 E-value=2.2e-07 Score=71.54 Aligned_cols=127 Identities=20% Similarity=0.366 Sum_probs=62.3
Q ss_pred eCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCccccc
Q psy15002 200 VPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLS 279 (357)
Q Consensus 200 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 279 (357)
++..+|.+..+|+.+.+.. .+..+...+|.++++|+.+.+.++ +..+....|... ..++.+.+.+ .+..++...|.
T Consensus 3 i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~-~~l~~i~~~~-~~~~i~~~~F~ 78 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNC-KSLESITFPN-NLKSIGDNAFS 78 (129)
T ss_dssp E-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT--TT-EEEEETS-TT-EE-TTTTT
T ss_pred ECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecc-cccccccccc-ccccccccccc
Confidence 4445666666666666664 456666666666666777776664 666666666665 4677777754 55555555666
Q ss_pred CCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCc
Q psy15002 280 KLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLN 333 (357)
Q Consensus 280 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~ 333 (357)
.+++++.+.+..+ ++.+....|.+. +|+.+.+.. .+..++...|.++++|+
T Consensus 79 ~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 79 NCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKLK 129 (129)
T ss_dssp T-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG------
T ss_pred ccccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccCC
Confidence 6777777777654 667766677665 777777665 56666666676666553
No 46
>KOG1644|consensus
Probab=98.61 E-value=5.1e-08 Score=78.06 Aligned_cols=106 Identities=25% Similarity=0.263 Sum_probs=81.0
Q ss_pred ccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCC-CCCCeEECCCCCCeeeCc-cccCCCCcCceee
Q psy15002 138 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEG-KALTQLDLSQNSLAVVPS-PALKSLNHLLILN 215 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ 215 (357)
.+...+|+++|.+..++. |..++.|.+|.+.+|+|+.|.+.+... ++|..|.+.+|.+..+.. ..+..+|.|++|.
T Consensus 42 d~~d~iDLtdNdl~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhhccc--CCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 568888999998888764 788889999999999999888887766 778888888888876543 3466778888888
Q ss_pred cccccCcccCc---ccCCCCCCCCEEEccCCcC
Q psy15002 216 LNHNKISALHS---NAFQGLDTLEILTIFENKL 245 (357)
Q Consensus 216 l~~n~l~~~~~---~~l~~l~~L~~L~L~~n~l 245 (357)
+-+|..+.... ..+..+|+|+.||.++-..
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~ 152 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVTR 152 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhhhhH
Confidence 88887765432 2345678888888876543
No 47
>KOG4579|consensus
Probab=98.46 E-value=5.2e-09 Score=78.42 Aligned_cols=135 Identities=21% Similarity=0.220 Sum_probs=98.3
Q ss_pred cCceeecccccCcccCc--ccCCCCCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEE
Q psy15002 210 HLLILNLNHNKISALHS--NAFQGLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKL 287 (357)
Q Consensus 210 ~L~~L~l~~n~l~~~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 287 (357)
.+..++|+.+.+..+.. ..+.....|+.++|++|.++.+++ .|...++.++.|++++|.+.++|.+ +..++.|+.|
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~-kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPK-KFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSL 105 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCH-HHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhc
Confidence 45667888887765522 233445678888999999998854 4444446889999999999999976 8889999999
Q ss_pred EccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCcccccCcc
Q psy15002 288 ELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTVDPA 348 (357)
Q Consensus 288 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~ 348 (357)
+++.|.+...+...+. +.++..|+..+|.+..++-..+.. ......++.+++|.+-.+.
T Consensus 106 Nl~~N~l~~~p~vi~~-L~~l~~Lds~~na~~eid~dl~~s-~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 106 NLRFNPLNAEPRVIAP-LIKLDMLDSPENARAEIDVDLFYS-SLPALIKLGNEPLGDETKK 164 (177)
T ss_pred ccccCccccchHHHHH-HHhHHHhcCCCCccccCcHHHhcc-ccHHHHHhcCCcccccCcc
Confidence 9999999888764444 788889999999998888765432 2333445566777665443
No 48
>KOG4579|consensus
Probab=98.42 E-value=5.3e-09 Score=78.40 Aligned_cols=86 Identities=26% Similarity=0.347 Sum_probs=38.2
Q ss_pred ccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCcCcccCcccCCCCCCCcEEeCCC
Q psy15002 260 LKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDG 339 (357)
Q Consensus 260 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~ 339 (357)
|+..++++|.+..+++......+.++.|++++|.++++|.+ +..++.|+.|+++.|.+...|..++. +.++..|+..+
T Consensus 55 l~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE-~Aam~aLr~lNl~~N~l~~~p~vi~~-L~~l~~Lds~~ 132 (177)
T KOG4579|consen 55 LTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEE-LAAMPALRSLNLRFNPLNAEPRVIAP-LIKLDMLDSPE 132 (177)
T ss_pred EEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHH-HhhhHHhhhcccccCccccchHHHHH-HHhHHHhcCCC
Confidence 34444444444444443333334444444444444444443 44444444444444444444433322 44444444444
Q ss_pred CcccccCc
Q psy15002 340 NHIHTVDP 347 (357)
Q Consensus 340 N~l~~~~~ 347 (357)
|.+..++.
T Consensus 133 na~~eid~ 140 (177)
T KOG4579|consen 133 NARAEIDV 140 (177)
T ss_pred CccccCcH
Confidence 44444433
No 49
>KOG4658|consensus
Probab=98.40 E-value=2.5e-07 Score=92.54 Aligned_cols=127 Identities=26% Similarity=0.324 Sum_probs=108.0
Q ss_pred cccEEEecCCCcceecCcccccccccceEEEccCCc--CceeChhhhcCCCCCcEEeccCC-ccccccCCCCCCCCCCeE
Q psy15002 114 DIRHLTIHNSSLAVVEESSLSSIGKKLKRLNLGGNE--LTRVPQTSLSKLENLRKLELLHN-RIALIEEGDFEGKALTQL 190 (357)
Q Consensus 114 ~L~~L~l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~--l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~~~L~~L 190 (357)
.++++.+-++.+..+....-. ++|+.|-+..|. +..++.+.|..++.|++||+++| .+..+|..+..+-+|++|
T Consensus 524 ~~rr~s~~~~~~~~~~~~~~~---~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHIAGSSEN---PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred heeEEEEeccchhhccCCCCC---CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 678899999988877665444 469999999996 88898888999999999999976 478999999999999999
Q ss_pred ECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCc
Q psy15002 191 DLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENK 244 (357)
Q Consensus 191 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 244 (357)
+++++.+..+|. .+..+..|.+|++..+.-....++....+.+|++|.+....
T Consensus 601 ~L~~t~I~~LP~-~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGISHLPS-GLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCccccch-HHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 999999998886 68889999999999886555556777779999999987654
No 50
>KOG2982|consensus
Probab=98.38 E-value=7.9e-08 Score=81.47 Aligned_cols=222 Identities=19% Similarity=0.207 Sum_probs=139.0
Q ss_pred ccEEEecCCCcceecC-cccccccccceEEEccCCcCceeCh--hhhcCCCCCcEEeccCCccccccCCC-CCCCCCCeE
Q psy15002 115 IRHLTIHNSSLAVVEE-SSLSSIGKKLKRLNLGGNELTRVPQ--TSLSKLENLRKLELLHNRIALIEEGD-FEGKALTQL 190 (357)
Q Consensus 115 L~~L~l~~~~l~~~~~-~~~~~l~~~L~~L~ls~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~~~L~~L 190 (357)
+.-+.+.++.|..+.+ ..+....+.++++|+.+|.|+.... ..+.++|.|+.|+++.|.+....... ....+|++|
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~l 126 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVL 126 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEE
Confidence 3455666666665543 2344444679999999999886332 34688999999999999987544433 455789999
Q ss_pred ECCCCCCeeeCc-cccCCCCcCceeecccccCcccC--cccCCC-CCCCCEEEccCCcCccc-CCCccccccccccEEEc
Q psy15002 191 DLSQNSLAVVPS-PALKSLNHLLILNLNHNKISALH--SNAFQG-LDTLEILTIFENKLSLI-EPDSFKGLEKKLKRLNL 265 (357)
Q Consensus 191 ~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~-l~~L~~L~L~~n~l~~~-~~~~~~~~~~~L~~L~l 265 (357)
-+.+..+..-.. ..+..+|.++.|.++.|.+..+. .+.... -+.++++...+|....- ....+....+++..+-+
T Consensus 127 VLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v 206 (418)
T KOG2982|consen 127 VLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFV 206 (418)
T ss_pred EEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheee
Confidence 998887754332 24556788888888888554321 111111 13556666666542211 11122233367788888
Q ss_pred cCCcCcccCc-ccccCCCCCcEEEccCCcCceeCc-CcCCCCCCCCEeecCCCcCcccCc------ccCCCCCCCcEEe
Q psy15002 266 GGNELTRVPQ-TSLSKLENLRKLELLHNRIALIEE-GDFEGLHNLDSLVLAHNQLRTIPP------RVFAHLPLLNSLE 336 (357)
Q Consensus 266 ~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~------~~~~~~~~L~~L~ 336 (357)
..|.+.+... ..+...+.+.-|+|+.|+|.++.. +++.+++.|..|.++++.+.+-.. -.++.+++++.|+
T Consensus 207 ~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLN 285 (418)
T KOG2982|consen 207 CEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLN 285 (418)
T ss_pred ecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEec
Confidence 8887765432 234556677788888888887643 467778888888888887764221 1234556666654
No 51
>KOG1644|consensus
Probab=98.32 E-value=1.1e-06 Score=70.43 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=8.1
Q ss_pred CCCCCCCEEEccCCcCccc
Q psy15002 230 QGLDTLEILTIFENKLSLI 248 (357)
Q Consensus 230 ~~l~~L~~L~L~~n~l~~~ 248 (357)
..++.|.+|.+++|+|+.+
T Consensus 61 p~l~rL~tLll~nNrIt~I 79 (233)
T KOG1644|consen 61 PHLPRLHTLLLNNNRITRI 79 (233)
T ss_pred CCccccceEEecCCcceee
Confidence 3344444444444444444
No 52
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.30 E-value=6.3e-07 Score=54.37 Aligned_cols=38 Identities=39% Similarity=0.739 Sum_probs=21.0
Q ss_pred CCCEeecCCCcCcccCcccCCCCCCCcEEeCCCCccccc
Q psy15002 307 NLDSLVLAHNQLRTIPPRVFAHLPLLNSLELDGNHIHTV 345 (357)
Q Consensus 307 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~N~l~~~ 345 (357)
+|++|++++|+|+.+++. ++++++|+.|++++|+++++
T Consensus 2 ~L~~L~l~~N~i~~l~~~-l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPE-LSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp T-SEEEETSSS-SSHGGH-GTTCTTSSEEEETSSCCSBE
T ss_pred cceEEEccCCCCcccCch-HhCCCCCCEEEecCCCCCCC
Confidence 455666666666665542 35566666666666666554
No 53
>KOG2982|consensus
Probab=98.27 E-value=2.3e-07 Score=78.74 Aligned_cols=208 Identities=19% Similarity=0.178 Sum_probs=139.0
Q ss_pred cceEEEccCCcCceeChh-hh-cCCCCCcEEeccCCccc---cccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCce
Q psy15002 139 KLKRLNLGGNELTRVPQT-SL-SKLENLRKLELLHNRIA---LIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLI 213 (357)
Q Consensus 139 ~L~~L~ls~n~l~~~~~~-~~-~~l~~L~~L~l~~n~l~---~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 213 (357)
.++.|.+.++.|..+... .| .....++.+||.+|.|+ +|..-+-.+|.|++|+++.|++.......-....+|++
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 356777777777765432 22 34578999999999886 45555556699999999999887544322235568899
Q ss_pred eecccccCcccC-cccCCCCCCCCEEEccCCcCccc--CCCccccccccccEEEccCCcCcccCc--ccccCCCCCcEEE
Q psy15002 214 LNLNHNKISALH-SNAFQGLDTLEILTIFENKLSLI--EPDSFKGLEKKLKRLNLGGNELTRVPQ--TSLSKLENLRKLE 288 (357)
Q Consensus 214 L~l~~n~l~~~~-~~~l~~l~~L~~L~L~~n~l~~~--~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~ 288 (357)
|.+.+.++.... ...+..+|.++.|.++.|.+..+ +.+......+.+.+|....|...-... ..-..+|++..+.
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~ 205 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVF 205 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchhee
Confidence 998887765322 22346678888888888855433 222222222456666666664432110 1112357888888
Q ss_pred ccCCcCceeCc-CcCCCCCCCCEeecCCCcCcccCc-ccCCCCCCCcEEeCCCCcccccC
Q psy15002 289 LLHNRIALIEE-GDFEGLHNLDSLVLAHNQLRTIPP-RVFAHLPLLNSLELDGNHIHTVD 346 (357)
Q Consensus 289 l~~n~l~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~ 346 (357)
+..|.+.+... ..+..++.+.-|.|+.|+|-++.. ..+..++.|.-|.+++|++.+.-
T Consensus 206 v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 206 VCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred eecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 99998877643 445567888899999999987665 44678899999999999887643
No 54
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.26 E-value=9.9e-07 Score=53.52 Aligned_cols=39 Identities=41% Similarity=0.618 Sum_probs=28.1
Q ss_pred cceEEEccCCcCceeChhhhcCCCCCcEEeccCCcccccc
Q psy15002 139 KLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIE 178 (357)
Q Consensus 139 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 178 (357)
+|++|++++|+|+.+++ .+.++++|++|++++|.++.++
T Consensus 2 ~L~~L~l~~N~i~~l~~-~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPP-ELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp T-SEEEETSSS-SSHGG-HGTTCTTSSEEEETSSCCSBEG
T ss_pred cceEEEccCCCCcccCc-hHhCCCCCCEEEecCCCCCCCc
Confidence 57788888888887765 3778888888888888777654
No 55
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.22 E-value=7.2e-06 Score=74.26 Aligned_cols=133 Identities=17% Similarity=0.286 Sum_probs=71.6
Q ss_pred ccceEEEccCCcCceeChhhhcCCCCCcEEeccC-CccccccCCCCCCCCCCeEECCCC-CCeeeCccccCCCCcCceee
Q psy15002 138 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLH-NRIALIEEGDFEGKALTQLDLSQN-SLAVVPSPALKSLNHLLILN 215 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~ 215 (357)
.+++.|++++|.++.+|. -..+|++|.+++ +.++.+|..+. ++|++|++++| .+..++ ++|+.|+
T Consensus 52 ~~l~~L~Is~c~L~sLP~----LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP-------~sLe~L~ 118 (426)
T PRK15386 52 RASGRLYIKDCDIESLPV----LPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLP-------ESVRSLE 118 (426)
T ss_pred cCCCEEEeCCCCCcccCC----CCCCCcEEEccCCCCcccCCchhh--hhhhheEccCcccccccc-------cccceEE
Confidence 457888888887777761 234688888876 44555554331 46777777776 444333 2466666
Q ss_pred cccccCcccCcccCCCC-CCCCEEEccCCc-CcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCc
Q psy15002 216 LNHNKISALHSNAFQGL-DTLEILTIFENK-LSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNR 293 (357)
Q Consensus 216 l~~n~l~~~~~~~l~~l-~~L~~L~L~~n~-l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 293 (357)
+..+....+ ..+ ++|+.|.+.+++ ....... ..+|++|+.|++++|.....+. .+. .+|+.|.++.+.
T Consensus 119 L~~n~~~~L-----~~LPssLk~L~I~~~n~~~~~~lp--~~LPsSLk~L~Is~c~~i~LP~-~LP--~SLk~L~ls~n~ 188 (426)
T PRK15386 119 IKGSATDSI-----KNVPNGLTSLSINSYNPENQARID--NLISPSLKTLSLTGCSNIILPE-KLP--ESLQSITLHIEQ 188 (426)
T ss_pred eCCCCCccc-----ccCcchHhheeccccccccccccc--cccCCcccEEEecCCCcccCcc-ccc--ccCcEEEecccc
Confidence 665544322 122 256666664322 1110000 1233567777777666554432 122 466677766553
No 56
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.21 E-value=4e-07 Score=76.35 Aligned_cols=17 Identities=35% Similarity=0.454 Sum_probs=8.8
Q ss_pred hcCCCCCcEEeccCCcc
Q psy15002 158 LSKLENLRKLELLHNRI 174 (357)
Q Consensus 158 ~~~l~~L~~L~l~~n~l 174 (357)
+-++|+|+..++|.|.+
T Consensus 88 Llkcp~l~~v~LSDNAf 104 (388)
T COG5238 88 LLKCPRLQKVDLSDNAF 104 (388)
T ss_pred HhcCCcceeeecccccc
Confidence 34455555555555544
No 57
>KOG2120|consensus
Probab=98.18 E-value=2.6e-08 Score=84.32 Aligned_cols=223 Identities=18% Similarity=0.108 Sum_probs=120.5
Q ss_pred EEEEEecCCCCcCccccccCCCcccEEEecCCCcceec-CcccccccccceEEEccCCcCceeC-hhhhcCCCCCcEEec
Q psy15002 92 IFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLAVVE-ESSLSSIGKKLKRLNLGGNELTRVP-QTSLSKLENLRKLEL 169 (357)
Q Consensus 92 l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~~~~-~~~~~~l~~~L~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l 169 (357)
-+.+|+.+-+|............+..+.+....+.... ...+.-....|++||+|...|+.-. ...+..+.+|+.|.+
T Consensus 138 W~~lDl~~r~i~p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~lSl 217 (419)
T KOG2120|consen 138 WQTLDLTGRNIHPDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNLSL 217 (419)
T ss_pred eeeeccCCCccChhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhccc
Confidence 35677777666543333222223333433332222110 0111111145888888888777421 233577788888888
Q ss_pred cCCccc-cccCCCCCCCCCCeEECCCC-CCeeeCc-cccCCCCcCceeecccccCcccCcc-cCCC-CCCCCEEEccCCc
Q psy15002 170 LHNRIA-LIEEGDFEGKALTQLDLSQN-SLAVVPS-PALKSLNHLLILNLNHNKISALHSN-AFQG-LDTLEILTIFENK 244 (357)
Q Consensus 170 ~~n~l~-~~~~~~~~~~~L~~L~l~~n-~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~-~l~~-l~~L~~L~L~~n~ 244 (357)
.++++. .+-..+....+|+.|+++.+ .++.... -.+.++..|..|++++|.+..-... .+.+ -++|+.|++++.+
T Consensus 218 Eg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~r 297 (419)
T KOG2120|consen 218 EGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYR 297 (419)
T ss_pred cccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhH
Confidence 888876 33334445577888888864 4544332 2356677888888888866432111 1111 1467777777763
Q ss_pred Cc--ccCCCccccccccccEEEccCCc-CcccCcccccCCCCCcEEEccCCcCceeCcC---cCCCCCCCCEeecCCC
Q psy15002 245 LS--LIEPDSFKGLEKKLKRLNLGGNE-LTRVPQTSLSKLENLRKLELLHNRIALIEEG---DFEGLHNLDSLVLAHN 316 (357)
Q Consensus 245 l~--~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~---~~~~~~~L~~L~L~~n 316 (357)
-. .-....+..-.+++..||+++|. ++.-....+.+++.|++|.++.|. .+++. .+...|+|.+||..++
T Consensus 298 rnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY--~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 298 RNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCY--DIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhc--CCChHHeeeeccCcceEEEEeccc
Confidence 21 11112222222677888887753 333223345667777777777764 23332 2345677777777654
No 58
>KOG2120|consensus
Probab=98.05 E-value=4.5e-08 Score=82.94 Aligned_cols=177 Identities=20% Similarity=0.150 Sum_probs=118.5
Q ss_pred CCCcEEeccCCccc--cccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeeccccc-CcccCc-ccCCCCCCCCE
Q psy15002 162 ENLRKLELLHNRIA--LIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNK-ISALHS-NAFQGLDTLEI 237 (357)
Q Consensus 162 ~~L~~L~l~~n~l~--~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~-~~l~~l~~L~~ 237 (357)
..|++|||++..|+ ++...+....+|+.|.+.++++.+-....+..-.+|+.++++.+. ++.... -.+.+++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 35888999988876 333334455788999999998887555567777889999998863 332211 13467789999
Q ss_pred EEccCCcCcccCC-CccccccccccEEEccCCcC--cccC-cccccCCCCCcEEEccCCc-CceeCcCcCCCCCCCCEee
Q psy15002 238 LTIFENKLSLIEP-DSFKGLEKKLKRLNLGGNEL--TRVP-QTSLSKLENLRKLELLHNR-IALIEEGDFEGLHNLDSLV 312 (357)
Q Consensus 238 L~L~~n~l~~~~~-~~~~~~~~~L~~L~l~~n~l--~~~~-~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~ 312 (357)
|+++++.+..-.. ....+..++++.|+++|..- ..-. ......+++|.+|+|+.+. ++.-....|-.++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 9999998754322 22233336889999988632 1111 1223578999999999874 3332223455688999999
Q ss_pred cCCCcCcccCcc---cCCCCCCCcEEeCCCC
Q psy15002 313 LAHNQLRTIPPR---VFAHLPLLNSLELDGN 340 (357)
Q Consensus 313 L~~n~l~~~~~~---~~~~~~~L~~L~L~~N 340 (357)
++.|.. ++|. .+...|.|.+||+-|+
T Consensus 345 lsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 345 LSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 988753 4443 2466789999998876
No 59
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.00 E-value=6.3e-05 Score=68.27 Aligned_cols=70 Identities=21% Similarity=0.334 Sum_probs=36.8
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCC-cceecCcccccccccceEEEccCC-cCceeChhhhcCCCCCcEE
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSS-LAVVEESSLSSIGKKLKRLNLGGN-ELTRVPQTSLSKLENLRKL 167 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~l~~~L~~L~ls~n-~l~~~~~~~~~~l~~L~~L 167 (357)
..++.|++++|.++.+|. + ..+|++|.+.++. ++.++ + .++.+|++|++++| .+..++. +|+.|
T Consensus 52 ~~l~~L~Is~c~L~sLP~--L-P~sLtsL~Lsnc~nLtsLP-~---~LP~nLe~L~Ls~Cs~L~sLP~-------sLe~L 117 (426)
T PRK15386 52 RASGRLYIKDCDIESLPV--L-PNELTEITIENCNNLTTLP-G---SIPEGLEKLTVCHCPEISGLPE-------SVRSL 117 (426)
T ss_pred cCCCEEEeCCCCCcccCC--C-CCCCcEEEccCCCCcccCC-c---hhhhhhhheEccCccccccccc-------ccceE
Confidence 445677777777777762 1 1256677666532 33322 1 12245666666666 4443332 35555
Q ss_pred eccCCc
Q psy15002 168 ELLHNR 173 (357)
Q Consensus 168 ~l~~n~ 173 (357)
++..+.
T Consensus 118 ~L~~n~ 123 (426)
T PRK15386 118 EIKGSA 123 (426)
T ss_pred EeCCCC
Confidence 555444
No 60
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.94 E-value=2.3e-06 Score=71.82 Aligned_cols=206 Identities=20% Similarity=0.230 Sum_probs=145.8
Q ss_pred ccceEEEccCCcCceeCh----hhhcCCCCCcEEeccCCcc-----------ccccCCCCCCCCCCeEECCCCCCeeeCc
Q psy15002 138 KKLKRLNLGGNELTRVPQ----TSLSKLENLRKLELLHNRI-----------ALIEEGDFEGKALTQLDLSQNSLAVVPS 202 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~----~~~~~l~~L~~L~l~~n~l-----------~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 202 (357)
..++.+++|+|.|..-.. ..+.+-.+|+..+++.--. ..+.+.+..+|.|+.++++.|.+..-.+
T Consensus 30 d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~~ 109 (388)
T COG5238 30 DELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEFP 109 (388)
T ss_pred cceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcccc
Confidence 579999999999885322 3356678888888876432 2233334455999999999998864322
Q ss_pred ----cccCCCCcCceeecccccCcccCcccC-------------CCCCCCCEEEccCCcCcccCCC----cccccccccc
Q psy15002 203 ----PALKSLNHLLILNLNHNKISALHSNAF-------------QGLDTLEILTIFENKLSLIEPD----SFKGLEKKLK 261 (357)
Q Consensus 203 ----~~~~~l~~L~~L~l~~n~l~~~~~~~l-------------~~l~~L~~L~L~~n~l~~~~~~----~~~~~~~~L~ 261 (357)
+.+++-..|.+|.+++|.+..+..+-+ ..-|.|+.+...+|++..-+.. .+... ..++
T Consensus 110 e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh-~~lk 188 (388)
T COG5238 110 EELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESH-ENLK 188 (388)
T ss_pred hHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhh-cCce
Confidence 345667889999999998876543322 3458899999999998765432 22222 5799
Q ss_pred EEEccCCcCcccCc-----ccccCCCCCcEEEccCCcCceeC----cCcCCCCCCCCEeecCCCcCcccCcc----cC--
Q psy15002 262 RLNLGGNELTRVPQ-----TSLSKLENLRKLELLHNRIALIE----EGDFEGLHNLDSLVLAHNQLRTIPPR----VF-- 326 (357)
Q Consensus 262 ~L~l~~n~l~~~~~-----~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~~~~L~~L~L~~n~l~~~~~~----~~-- 326 (357)
.+.+.+|.+..-.. ..+..+.+|+.|+++.|.++... ..+++.++.|+.|.+..|-++.-... .|
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e 268 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNE 268 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhh
Confidence 99999998875321 12356789999999999887643 34567788899999999988743221 12
Q ss_pred CCCCCCcEEeCCCCcccc
Q psy15002 327 AHLPLLNSLELDGNHIHT 344 (357)
Q Consensus 327 ~~~~~L~~L~L~~N~l~~ 344 (357)
...|+|..|...+|.+.+
T Consensus 269 ~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 269 KFVPNLMPLPGDYNERRG 286 (388)
T ss_pred hcCCCccccccchhhhcC
Confidence 235889999999997655
No 61
>KOG3665|consensus
Probab=97.65 E-value=6.6e-06 Score=80.46 Aligned_cols=180 Identities=18% Similarity=0.218 Sum_probs=102.8
Q ss_pred ceEEEEEecCCCCcCccccccCCCcccEEEecCCCcc-------------eecCccc-ccccccceEEEccCCcCce--e
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGLDIRHLTIHNSSLA-------------VVEESSL-SSIGKKLKRLNLGGNELTR--V 153 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~~L~~L~l~~~~l~-------------~~~~~~~-~~l~~~L~~L~ls~n~l~~--~ 153 (357)
-.+..+++.+.....-.........|+++.+.+-... .+....+ .....+|++|++++...-. .
T Consensus 60 f~ltki~l~~~~~~~~~~~~l~~~~L~sl~LGnl~~~k~~~~~~~~idi~~lL~~~Ln~~sr~nL~~LdI~G~~~~s~~W 139 (699)
T KOG3665|consen 60 FNLTKIDLKNVTLQHQTLEMLRKQDLESLKLGNLDKIKQDYLDDATIDIISLLKDLLNEESRQNLQHLDISGSELFSNGW 139 (699)
T ss_pred heeEEeeccceecchhHHHHHhhccccccCCcchHhhhhhhhhhhhccHHHHHHHHHhHHHHHhhhhcCccccchhhccH
Confidence 4555666666655544444444444556655542211 1111111 1112578888888864332 1
Q ss_pred ChhhhcCCCCCcEEeccCCcccc--ccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecccccCcc-cCcccCC
Q psy15002 154 PQTSLSKLENLRKLELLHNRIAL--IEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISA-LHSNAFQ 230 (357)
Q Consensus 154 ~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~ 230 (357)
+...-.-+|+|+.|.+.+-.+.. ...-..+.++|..||++++.++.+. .++++.+|+.|.+.+=.+.. ..-..+.
T Consensus 140 ~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~--GIS~LknLq~L~mrnLe~e~~~~l~~LF 217 (699)
T KOG3665|consen 140 PKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLS--GISRLKNLQVLSMRNLEFESYQDLIDLF 217 (699)
T ss_pred HHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcH--HHhccccHHHHhccCCCCCchhhHHHHh
Confidence 11222456888888888766532 1122223488888888888888773 56778888888777654443 1122345
Q ss_pred CCCCCCEEEccCCcCcccC------CCccccccccccEEEccCCcCcc
Q psy15002 231 GLDTLEILTIFENKLSLIE------PDSFKGLEKKLKRLNLGGNELTR 272 (357)
Q Consensus 231 ~l~~L~~L~L~~n~l~~~~------~~~~~~~~~~L~~L~l~~n~l~~ 272 (357)
++++|+.||+|+....... .+.-..+ |+|+.||.+++.++.
T Consensus 218 ~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~L-peLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 218 NLKKLRVLDISRDKNNDDTKIIEQYLECGMVL-PELRFLDCSGTDINE 264 (699)
T ss_pred cccCCCeeeccccccccchHHHHHHHHhcccC-ccccEEecCCcchhH
Confidence 6888888888876543321 1122234 688888888877664
No 62
>KOG3665|consensus
Probab=97.47 E-value=3.9e-05 Score=75.18 Aligned_cols=55 Identities=25% Similarity=0.400 Sum_probs=24.6
Q ss_pred ccceEEEccCCcCceeChhhhcCCCCCcEEeccCCcccc--ccCCCCCCCCCCeEECCC
Q psy15002 138 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIAL--IEEGDFEGKALTQLDLSQ 194 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~~~L~~L~l~~ 194 (357)
++|..||+|+++++.+ ..++++++|+.|.+.+=.+.. .-..+|.+++|+.||+|.
T Consensus 173 pNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~ 229 (699)
T KOG3665|consen 173 PNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISR 229 (699)
T ss_pred CccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccc
Confidence 3455555555555444 224445555555444444331 122344444444444444
No 63
>KOG2739|consensus
Probab=97.43 E-value=3.7e-05 Score=64.44 Aligned_cols=103 Identities=29% Similarity=0.351 Sum_probs=59.0
Q ss_pred ccceEEEccCCcCceeChhhhcCCCCCcEEeccCC--ccc-cccCCCCCCCCCCeEECCCCCCeeeCc-cccCCCCcCce
Q psy15002 138 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHN--RIA-LIEEGDFEGKALTQLDLSQNSLAVVPS-PALKSLNHLLI 213 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n--~l~-~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~ 213 (357)
..|+.|++.+..++.+.. |-.+++|++|+++.| ++. .++..+-..++|+++++++|+++.+.. .....+.+|..
T Consensus 43 ~~le~ls~~n~gltt~~~--~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~ 120 (260)
T KOG2739|consen 43 VELELLSVINVGLTTLTN--FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKS 120 (260)
T ss_pred cchhhhhhhccceeeccc--CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhh
Confidence 346777777777666543 566777888888877 333 333333334777777777777764332 23445566777
Q ss_pred eecccccCcccCc---ccCCCCCCCCEEEccC
Q psy15002 214 LNLNHNKISALHS---NAFQGLDTLEILTIFE 242 (357)
Q Consensus 214 L~l~~n~l~~~~~---~~l~~l~~L~~L~L~~ 242 (357)
|++.+|..+.... ..|.-+++|++|+-.+
T Consensus 121 Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 121 LDLFNCSVTNLDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred hhcccCCccccccHHHHHHHHhhhhccccccc
Confidence 7777765443221 2233345665555443
No 64
>KOG2123|consensus
Probab=96.97 E-value=1.9e-05 Score=66.70 Aligned_cols=81 Identities=25% Similarity=0.263 Sum_probs=43.6
Q ss_pred CCCeEECCCCCCeeeCccccCCCCcCceeecccccCcccCcccCCCCCCCCEEEccCCcCcccCCC-ccccccccccEEE
Q psy15002 186 ALTQLDLSQNSLAVVPSPALKSLNHLLILNLNHNKISALHSNAFQGLDTLEILTIFENKLSLIEPD-SFKGLEKKLKRLN 264 (357)
Q Consensus 186 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~~~~~~~~L~~L~ 264 (357)
+.+.|++.++.+.+|.. ...|+.|+.|.|+-|+|+.+.+ +..+++|++|+|..|.|..++.- .+.++ ++|+.|+
T Consensus 20 ~vkKLNcwg~~L~DIsi--c~kMp~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknl-psLr~LW 94 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDISI--CEKMPLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNL-PSLRTLW 94 (388)
T ss_pred HhhhhcccCCCccHHHH--HHhcccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcC-chhhhHh
Confidence 34455555555555542 3455666666666666665533 45556666666666666555432 22333 5666666
Q ss_pred ccCCcCc
Q psy15002 265 LGGNELT 271 (357)
Q Consensus 265 l~~n~l~ 271 (357)
|..|.-.
T Consensus 95 L~ENPCc 101 (388)
T KOG2123|consen 95 LDENPCC 101 (388)
T ss_pred hccCCcc
Confidence 6655443
No 65
>KOG2123|consensus
Probab=96.88 E-value=3.9e-05 Score=64.86 Aligned_cols=100 Identities=25% Similarity=0.330 Sum_probs=71.9
Q ss_pred CCCCCEEEccCCcCcccCCCccccccccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCc-CcCCCCCCCCE
Q psy15002 232 LDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEE-GDFEGLHNLDS 310 (357)
Q Consensus 232 l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~ 310 (357)
+.+.+.|++-++++..+. ....+ +.|+.|.|+-|.++.+.+ +..+.+|++|+|..|.|.++.. ..+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~DIs--ic~kM-p~lEVLsLSvNkIssL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDIS--ICEKM-PLLEVLSLSVNKISSLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccHHH--HHHhc-ccceeEEeeccccccchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 346677888888887763 22234 678888888888888764 7778888888888888888754 35577888888
Q ss_pred eecCCCcCcccCc-----ccCCCCCCCcEEe
Q psy15002 311 LVLAHNQLRTIPP-----RVFAHLPLLNSLE 336 (357)
Q Consensus 311 L~L~~n~l~~~~~-----~~~~~~~~L~~L~ 336 (357)
|.|..|..++-.. ..+.-+|+|++||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 8888887664332 2345567777775
No 66
>KOG2739|consensus
Probab=96.70 E-value=0.0009 Score=56.30 Aligned_cols=103 Identities=30% Similarity=0.400 Sum_probs=67.0
Q ss_pred CCCCCCEEEccCCcCcccCCCccccccccccEEEccCCc--Ccc-cCcccccCCCCCcEEEccCCcCceeC-cCcCCCCC
Q psy15002 231 GLDTLEILTIFENKLSLIEPDSFKGLEKKLKRLNLGGNE--LTR-VPQTSLSKLENLRKLELLHNRIALIE-EGDFEGLH 306 (357)
Q Consensus 231 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~--l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~~~ 306 (357)
....|+.+++.+.+++.+ ..|..+ ++|+.|.++.|. ... +.. ....+|+|+++++++|++..+. ...+..+.
T Consensus 41 ~~~~le~ls~~n~gltt~--~~~P~L-p~LkkL~lsdn~~~~~~~l~v-l~e~~P~l~~l~ls~Nki~~lstl~pl~~l~ 116 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTL--TNFPKL-PKLKKLELSDNYRRVSGGLEV-LAEKAPNLKVLNLSGNKIKDLSTLRPLKELE 116 (260)
T ss_pred cccchhhhhhhccceeec--ccCCCc-chhhhhcccCCccccccccee-hhhhCCceeEEeecCCccccccccchhhhhc
Confidence 345677777777777665 344555 689999999983 332 222 2345589999999999887532 12345577
Q ss_pred CCCEeecCCCcCcccCc---ccCCCCCCCcEEeC
Q psy15002 307 NLDSLVLAHNQLRTIPP---RVFAHLPLLNSLEL 337 (357)
Q Consensus 307 ~L~~L~L~~n~l~~~~~---~~~~~~~~L~~L~L 337 (357)
+|..|++.+|..+.+.. .+|.=+++|++||-
T Consensus 117 nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 117 NLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred chhhhhcccCCccccccHHHHHHHHhhhhccccc
Confidence 88889988887765443 23444566666653
No 67
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.39 E-value=0.0013 Score=33.10 Aligned_cols=20 Identities=35% Similarity=0.722 Sum_probs=10.3
Q ss_pred CcEEeCCCCcccccCcccccC
Q psy15002 332 LNSLELDGNHIHTVDPAAFSG 352 (357)
Q Consensus 332 L~~L~L~~N~l~~~~~~~~~~ 352 (357)
|++|||++|.++.+++. |++
T Consensus 2 L~~Ldls~n~l~~ip~~-~~~ 21 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSS-FSN 21 (22)
T ss_dssp ESEEEETSSEESEEGTT-TTT
T ss_pred ccEEECCCCcCEeCChh-hcC
Confidence 45555555555544444 443
No 68
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.02 E-value=0.0034 Score=31.60 Aligned_cols=16 Identities=50% Similarity=0.885 Sum_probs=7.2
Q ss_pred ceEEEccCCcCceeCh
Q psy15002 140 LKRLNLGGNELTRVPQ 155 (357)
Q Consensus 140 L~~L~ls~n~l~~~~~ 155 (357)
|++|++++|+++.+++
T Consensus 2 L~~Ldls~n~l~~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPS 17 (22)
T ss_dssp ESEEEETSSEESEEGT
T ss_pred ccEEECCCCcCEeCCh
Confidence 4444444444444443
No 69
>KOG4341|consensus
Probab=95.54 E-value=0.00029 Score=63.01 Aligned_cols=251 Identities=20% Similarity=0.105 Sum_probs=117.7
Q ss_pred ceEEEEEecCCCC---cCccccccCCCcccEEEecCCC-cceecCcccccccccceEEEccCC-cCceeChh-hhcCCCC
Q psy15002 90 LIIFYLKLRHNNL---PKLTGFIFFGLDIRHLTIHNSS-LAVVEESSLSSIGKKLKRLNLGGN-ELTRVPQT-SLSKLEN 163 (357)
Q Consensus 90 ~~l~~L~l~~~~i---~~l~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~l~~~L~~L~ls~n-~l~~~~~~-~~~~l~~ 163 (357)
..++.|.++++.= ..+....-...++++|.+.++. ++...-..+....++|++|++..| .++...-. .-.++++
T Consensus 138 g~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~k 217 (483)
T KOG4341|consen 138 GFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRK 217 (483)
T ss_pred cccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhh
Confidence 4556777777632 2333334445578888777765 222222233333467888888774 45443322 2356788
Q ss_pred CcEEeccCCcc-cc--ccCCCCCCCCCCeEECC--------------------------CC-CCeeeCccc-cCCCCcCc
Q psy15002 164 LRKLELLHNRI-AL--IEEGDFEGKALTQLDLS--------------------------QN-SLAVVPSPA-LKSLNHLL 212 (357)
Q Consensus 164 L~~L~l~~n~l-~~--~~~~~~~~~~L~~L~l~--------------------------~n-~l~~~~~~~-~~~l~~L~ 212 (357)
|++|+++.+.- +. +.........++.+... .+ .+++..... -..+..|+
T Consensus 218 L~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq 297 (483)
T KOG4341|consen 218 LKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQ 297 (483)
T ss_pred HHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhh
Confidence 88888876531 11 00000001222233222 21 122221100 11234555
Q ss_pred eeecccccC-cccCcccC-CCCCCCCEEEccCCc-CcccCCCccccccccccEEEccCCcCcccC--cccccCCCCCcEE
Q psy15002 213 ILNLNHNKI-SALHSNAF-QGLDTLEILTIFENK-LSLIEPDSFKGLEKKLKRLNLGGNELTRVP--QTSLSKLENLRKL 287 (357)
Q Consensus 213 ~L~l~~n~l-~~~~~~~l-~~l~~L~~L~L~~n~-l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L 287 (357)
.+..+++.- +...-.++ .+.++|+.+-+.+++ ++......++...+.|+.+++.++...... ...-.+++.|+.+
T Consensus 298 ~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~l 377 (483)
T KOG4341|consen 298 VLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVL 377 (483)
T ss_pred hhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccC
Confidence 555555422 11111111 334667777776664 222222222222256666666665543221 1112355677777
Q ss_pred EccCCcCc-eeC----cCcCCCCCCCCEeecCCCcCc-ccCcccCCCCCCCcEEeCCCC
Q psy15002 288 ELLHNRIA-LIE----EGDFEGLHNLDSLVLAHNQLR-TIPPRVFAHLPLLNSLELDGN 340 (357)
Q Consensus 288 ~l~~n~l~-~~~----~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~~~~L~~L~L~~N 340 (357)
.++++..- +.. ...-.++..++.+-|+++... +-.-+.+..+++|+.+++-++
T Consensus 378 slshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~ 436 (483)
T KOG4341|consen 378 SLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDC 436 (483)
T ss_pred ChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeech
Confidence 77765422 211 111234566777777776544 222234456667777776665
No 70
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.46 E-value=0.01 Score=27.67 Aligned_cols=12 Identities=42% Similarity=0.603 Sum_probs=3.8
Q ss_pred CCEeecCCCcCc
Q psy15002 308 LDSLVLAHNQLR 319 (357)
Q Consensus 308 L~~L~L~~n~l~ 319 (357)
|+.|++++|+|+
T Consensus 3 L~~L~l~~n~L~ 14 (17)
T PF13504_consen 3 LRTLDLSNNRLT 14 (17)
T ss_dssp -SEEEETSS--S
T ss_pred cCEEECCCCCCC
Confidence 344444444443
No 71
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.41 E-value=0.012 Score=30.90 Aligned_cols=22 Identities=36% Similarity=0.736 Sum_probs=14.6
Q ss_pred CCCcEEeCCCCcccccCccccc
Q psy15002 330 PLLNSLELDGNHIHTVDPAAFS 351 (357)
Q Consensus 330 ~~L~~L~L~~N~l~~~~~~~~~ 351 (357)
++|+.|+|++|+++.+++++|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4566777777777777666664
No 72
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.41 E-value=0.012 Score=30.90 Aligned_cols=22 Identities=36% Similarity=0.736 Sum_probs=14.6
Q ss_pred CCCcEEeCCCCcccccCccccc
Q psy15002 330 PLLNSLELDGNHIHTVDPAAFS 351 (357)
Q Consensus 330 ~~L~~L~L~~N~l~~~~~~~~~ 351 (357)
++|+.|+|++|+++.+++++|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f~ 23 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAFQ 23 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHcc
Confidence 4566777777777777666664
No 73
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.40 E-value=0.0097 Score=27.77 Aligned_cols=14 Identities=50% Similarity=0.767 Sum_probs=4.8
Q ss_pred CCcEEeccCCcccc
Q psy15002 163 NLRKLELLHNRIAL 176 (357)
Q Consensus 163 ~L~~L~l~~n~l~~ 176 (357)
+|+.|++++|++++
T Consensus 2 ~L~~L~l~~n~L~~ 15 (17)
T PF13504_consen 2 NLRTLDLSNNRLTS 15 (17)
T ss_dssp T-SEEEETSS--SS
T ss_pred ccCEEECCCCCCCC
Confidence 34444444444443
No 74
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=95.38 E-value=0.01 Score=31.20 Aligned_cols=21 Identities=38% Similarity=0.718 Sum_probs=11.6
Q ss_pred CCCcEEeccCCccccccCCCC
Q psy15002 162 ENLRKLELLHNRIALIEEGDF 182 (357)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~~~~ 182 (357)
++|++|++++|.++.+|.++|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 445555555555555555544
No 75
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=95.38 E-value=0.01 Score=31.20 Aligned_cols=21 Identities=38% Similarity=0.718 Sum_probs=11.6
Q ss_pred CCCcEEeccCCccccccCCCC
Q psy15002 162 ENLRKLELLHNRIALIEEGDF 182 (357)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~~~~ 182 (357)
++|++|++++|.++.+|.++|
T Consensus 2 ~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCEEECCCCcCCcCCHHHc
Confidence 445555555555555555544
No 76
>KOG4341|consensus
Probab=95.36 E-value=0.00031 Score=62.85 Aligned_cols=229 Identities=19% Similarity=0.134 Sum_probs=114.1
Q ss_pred cccEEEecCCCcc-eecCcccccccccceEEEccCCc-CceeChhhh-cCCCCCcEEeccC-Ccccccc-CCCC-CCCCC
Q psy15002 114 DIRHLTIHNSSLA-VVEESSLSSIGKKLKRLNLGGNE-LTRVPQTSL-SKLENLRKLELLH-NRIALIE-EGDF-EGKAL 187 (357)
Q Consensus 114 ~L~~L~l~~~~l~-~~~~~~~~~l~~~L~~L~ls~n~-l~~~~~~~~-~~l~~L~~L~l~~-n~l~~~~-~~~~-~~~~L 187 (357)
.++.|.+.+++=. .-....+....+++++|.+.++. +++..-..+ ..+++|++|++.. ..++... .++. ..++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 6788888887532 22223344445789999999885 333322223 5678999999988 4455321 1122 23889
Q ss_pred CeEECCCCC-CeeeCc-cccCCCCcCceeeccccc---------------------------CcccCc-ccCCCCCCCCE
Q psy15002 188 TQLDLSQNS-LAVVPS-PALKSLNHLLILNLNHNK---------------------------ISALHS-NAFQGLDTLEI 237 (357)
Q Consensus 188 ~~L~l~~n~-l~~~~~-~~~~~l~~L~~L~l~~n~---------------------------l~~~~~-~~l~~l~~L~~ 237 (357)
++++++.+. +++-.. ..+++...++.+.+.+|. ++.... ..-.++..|+.
T Consensus 219 ~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~ 298 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQV 298 (483)
T ss_pred HHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhh
Confidence 999999864 332111 123344445555444431 111100 00012344555
Q ss_pred EEccCCc-CcccCCCccccccccccEEEccCCc-CcccCcccc-cCCCCCcEEEccCCcCceeC--cCcCCCCCCCCEee
Q psy15002 238 LTIFENK-LSLIEPDSFKGLEKKLKRLNLGGNE-LTRVPQTSL-SKLENLRKLELLHNRIALIE--EGDFEGLHNLDSLV 312 (357)
Q Consensus 238 L~L~~n~-l~~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~--~~~~~~~~~L~~L~ 312 (357)
++.+++. ++......++.-..+|+.+.+.+++ ++......+ .+.+.|+.+++.++...... ...-.+++.|+.+.
T Consensus 299 l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~ls 378 (483)
T KOG4341|consen 299 LCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLS 378 (483)
T ss_pred hcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCC
Confidence 5554432 2221122232222566666666654 333322222 24456666666665432211 11113467777777
Q ss_pred cCCCcCcccC-----cccCCCCCCCcEEeCCCCcc
Q psy15002 313 LAHNQLRTIP-----PRVFAHLPLLNSLELDGNHI 342 (357)
Q Consensus 313 L~~n~l~~~~-----~~~~~~~~~L~~L~L~~N~l 342 (357)
++++.+..-. ...-.....|..+.|++++.
T Consensus 379 lshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~ 413 (483)
T KOG4341|consen 379 LSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPL 413 (483)
T ss_pred hhhhhhhhhhhhhhhhhccccccccceeeecCCCC
Confidence 7766543222 11113345677777777754
No 77
>PF01462 LRRNT: Leucine rich repeat N-terminal domain; InterPro: IPR000372 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. LRRs are often flanked by cysteine-rich domains: an N-terminal LRR domain and a C-terminal LRR domain (IPR000483 from INTERPRO). This entry represents the N-terminal LRR domain. ; PDB: 3E6J_A 1W8A_A 2V9S_C 2V9T_B 3TWI_D 3ZYN_A 3ZYO_A 1OOK_G 1QYY_G 1SQ0_B ....
Probab=94.28 E-value=0.025 Score=30.31 Aligned_cols=25 Identities=28% Similarity=0.670 Sum_probs=19.1
Q ss_pred CCCCCCCCCCceeccccCCeEEecccCChhhHHH
Q psy15002 46 QCPPHNEISPCQCSVKKNGLDILCEFTDNQKIQH 79 (357)
Q Consensus 46 ~Cp~~~~~~~C~C~~~~~~~~~~C~~~~l~~i~~ 79 (357)
.||. .|.|... .|+|++.+++++|.
T Consensus 1 ~CP~-----~C~C~~~----~V~C~~~~L~~vP~ 25 (28)
T PF01462_consen 1 ACPR-----PCTCSGL----TVDCSGRGLTAVPS 25 (28)
T ss_dssp SSET-----TSEEETT----EEEETTSS-SSS-S
T ss_pred CcCC-----CCEecCC----EeECCCCCCCccCC
Confidence 4888 6999933 99999999998874
No 78
>KOG1947|consensus
Probab=93.78 E-value=0.0031 Score=59.88 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=19.4
Q ss_pred cCCCCCCCCEeecCCCcCcccC-cccCCCCCCC
Q psy15002 301 DFEGLHNLDSLVLAHNQLRTIP-PRVFAHLPLL 332 (357)
Q Consensus 301 ~~~~~~~L~~L~L~~n~l~~~~-~~~~~~~~~L 332 (357)
...++++++.+.+.++...... ...+.+++.|
T Consensus 357 ~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l 389 (482)
T KOG1947|consen 357 ILRSCPKLTDLSLSYCGISDLGLELSLRGCPNL 389 (482)
T ss_pred HHhcCCCcchhhhhhhhccCcchHHHhcCCccc
Confidence 3456778888888877744433 2344556655
No 79
>KOG1947|consensus
Probab=93.23 E-value=0.0069 Score=57.53 Aligned_cols=203 Identities=23% Similarity=0.145 Sum_probs=93.3
Q ss_pred ccceEEEccCC-cCceeC-hhhhcCCCCCcEEeccCC--cccccc----CCCCCCCCCCeEECCCCC-CeeeCccccC-C
Q psy15002 138 KKLKRLNLGGN-ELTRVP-QTSLSKLENLRKLELLHN--RIALIE----EGDFEGKALTQLDLSQNS-LAVVPSPALK-S 207 (357)
Q Consensus 138 ~~L~~L~ls~n-~l~~~~-~~~~~~l~~L~~L~l~~n--~l~~~~----~~~~~~~~L~~L~l~~n~-l~~~~~~~~~-~ 207 (357)
+.|+.|.+.++ .+.... .......++|+.|+++++ .++..+ .......+|+.|+++++. +++..-..+. .
T Consensus 188 ~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~ 267 (482)
T KOG1947|consen 188 PLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASR 267 (482)
T ss_pred chhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhh
Confidence 45666666655 333311 123455677777777652 111111 111122666777777665 4443322222 2
Q ss_pred CCcCceeeccccc-CcccCcc-cCCCCCCCCEEEccCCcCc-ccCCCccccccccccEEEccCC--------------cC
Q psy15002 208 LNHLLILNLNHNK-ISALHSN-AFQGLDTLEILTIFENKLS-LIEPDSFKGLEKKLKRLNLGGN--------------EL 270 (357)
Q Consensus 208 l~~L~~L~l~~n~-l~~~~~~-~l~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~~L~~L~l~~n--------------~l 270 (357)
+++|+.|.+.++. ++...-. ....++.|++|+++++... ...........++++.|.+... .-
T Consensus 268 c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~c~~l~~~~l~~~~~ 347 (482)
T KOG1947|consen 268 CPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNGCPSLTDLSLSGLLT 347 (482)
T ss_pred CCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCCCccHHHHHHHHhhc
Confidence 5677777766554 3322111 1234566777777766432 1000000111123333322221 11
Q ss_pred ---cccCcccccCCCCCcEEEccCCcCceeC-cCcCCCCCCC--------------CEeecCCCcCcccCccc-CCC-CC
Q psy15002 271 ---TRVPQTSLSKLENLRKLELLHNRIALIE-EGDFEGLHNL--------------DSLVLAHNQLRTIPPRV-FAH-LP 330 (357)
Q Consensus 271 ---~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~~~~L--------------~~L~L~~n~l~~~~~~~-~~~-~~ 330 (357)
..........+++++.+.+..+...... ...+.+++.| +.|+++.+.......-. ... +.
T Consensus 348 ~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~~~l~~~~~~~~~l~~L~l~~~~~~t~~~l~~~~~~~~ 427 (482)
T KOG1947|consen 348 LTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLTESLELRLCRSDSLRVLNLSDCRLVTDKGLRCLADSCS 427 (482)
T ss_pred cCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccchHHHHHhccCCccceEecccCccccccchHHHhhhhh
Confidence 0111123456788888888877754443 2344455544 55555555444333311 111 44
Q ss_pred CCcEEeCCCC
Q psy15002 331 LLNSLELDGN 340 (357)
Q Consensus 331 ~L~~L~L~~N 340 (357)
.+..+++.+.
T Consensus 428 ~~~~l~~~~~ 437 (482)
T KOG1947|consen 428 NLKDLDLSGC 437 (482)
T ss_pred ccccCCccCc
Confidence 4555666655
No 80
>KOG3864|consensus
Probab=93.07 E-value=0.018 Score=46.81 Aligned_cols=82 Identities=23% Similarity=0.239 Sum_probs=43.2
Q ss_pred ceEEEEEecCCCCcCccccccCCC-cccEEEecCCC-cceecCcccccccccceEEEccCC-cCceeChhhhcCCCCCcE
Q psy15002 90 LIIFYLKLRHNNLPKLTGFIFFGL-DIRHLTIHNSS-LAVVEESSLSSIGKKLKRLNLGGN-ELTRVPQTSLSKLENLRK 166 (357)
Q Consensus 90 ~~l~~L~l~~~~i~~l~~~~~~~~-~L~~L~l~~~~-l~~~~~~~~~~l~~~L~~L~ls~n-~l~~~~~~~~~~l~~L~~ 166 (357)
..++.++-+++.|....-.-+.+. .++.|.+.+|. +....-..+.+..++|+.|++++| .|++-.-..+..+++|+.
T Consensus 101 ~~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 101 VKIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRR 180 (221)
T ss_pred ceEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHH
Confidence 455666666666665555545444 55666665553 111111222233356777777766 355444344556666666
Q ss_pred EeccC
Q psy15002 167 LELLH 171 (357)
Q Consensus 167 L~l~~ 171 (357)
|.+.+
T Consensus 181 L~l~~ 185 (221)
T KOG3864|consen 181 LHLYD 185 (221)
T ss_pred HHhcC
Confidence 66543
No 81
>KOG4308|consensus
Probab=91.99 E-value=0.00096 Score=62.74 Aligned_cols=180 Identities=29% Similarity=0.306 Sum_probs=81.0
Q ss_pred ceEEEccCCcCceeCh----hhhcCCCCCcEEeccCCcccc-----ccCCCCCC-CCCCeEECCCCCCeeeCc----ccc
Q psy15002 140 LKRLNLGGNELTRVPQ----TSLSKLENLRKLELLHNRIAL-----IEEGDFEG-KALTQLDLSQNSLAVVPS----PAL 205 (357)
Q Consensus 140 L~~L~ls~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~-----~~~~~~~~-~~L~~L~l~~n~l~~~~~----~~~ 205 (357)
+..|.+.+|.+..-.. ..+...+.|+.|++++|.+.. +-..+-.. ..+++|++..+.++.... ..+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 5555555655554322 223445566666666665541 11111111 344555555555543321 223
Q ss_pred CCCCcCceeecccccCcccC----ccc----CCCCCCCCEEEccCCcCcccCC----CccccccccccEEEccCCcCccc
Q psy15002 206 KSLNHLLILNLNHNKISALH----SNA----FQGLDTLEILTIFENKLSLIEP----DSFKGLEKKLKRLNLGGNELTRV 273 (357)
Q Consensus 206 ~~l~~L~~L~l~~n~l~~~~----~~~----l~~l~~L~~L~L~~n~l~~~~~----~~~~~~~~~L~~L~l~~n~l~~~ 273 (357)
.....++.++++.|.+.... ... +....++++|.+.++.++.... ..+......+..+++..|.+.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 33556666666666553211 111 2234566666666666553221 11111211244466666665533
Q ss_pred Cc----ccccCC-CCCcEEEccCCcCceeCc----CcCCCCCCCCEeecCCCcCc
Q psy15002 274 PQ----TSLSKL-ENLRKLELLHNRIALIEE----GDFEGLHNLDSLVLAHNQLR 319 (357)
Q Consensus 274 ~~----~~~~~l-~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~L~L~~n~l~ 319 (357)
.. ..+..+ +.++.++++.|.+++-.. ..+..++.++.+.+.+|.+.
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 11 112222 445556666665554322 12233445555555555554
No 82
>smart00013 LRRNT Leucine rich repeat N-terminal domain.
Probab=91.82 E-value=0.11 Score=29.05 Aligned_cols=26 Identities=27% Similarity=0.673 Sum_probs=21.4
Q ss_pred CCCCCCCCCCceeccccCCeEEecccCChhhHHHH
Q psy15002 46 QCPPHNEISPCQCSVKKNGLDILCEFTDNQKIQHT 80 (357)
Q Consensus 46 ~Cp~~~~~~~C~C~~~~~~~~~~C~~~~l~~i~~~ 80 (357)
.||. .|.|.. ..|+|+..+++++|..
T Consensus 1 ~CP~-----~C~C~~----~~V~C~~~~L~~vP~~ 26 (33)
T smart00013 1 ACPA-----PCNCSG----TAVDCSGRGLTEVPLD 26 (33)
T ss_pred CcCC-----CCEECC----CEeEeCCCCcCccCCC
Confidence 4888 699983 3999999999988854
No 83
>KOG0473|consensus
Probab=90.30 E-value=0.0056 Score=50.85 Aligned_cols=81 Identities=20% Similarity=0.272 Sum_probs=45.1
Q ss_pred ccceEEEccCCcCceeChhhhcCCCCCcEEeccCCccccccCCCCCCCCCCeEECCCCCCeeeCccccCCCCcCceeecc
Q psy15002 138 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGKALTQLDLSQNSLAVVPSPALKSLNHLLILNLN 217 (357)
Q Consensus 138 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 217 (357)
+..+.||++.|.+..+... |+-+..|..|+++.|.+..+|.+......+..++...|..+..|. .+...+.++++++.
T Consensus 42 kr~tvld~~s~r~vn~~~n-~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~-s~~k~~~~k~~e~k 119 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLVNLGKN-FSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPK-SQKKEPHPKKNEQK 119 (326)
T ss_pred ceeeeehhhhhHHHhhccc-hHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCc-cccccCCcchhhhc
Confidence 3466666666666555543 555556666666666666666555555445555555555544443 34455555555555
Q ss_pred ccc
Q psy15002 218 HNK 220 (357)
Q Consensus 218 ~n~ 220 (357)
.|.
T Consensus 120 ~~~ 122 (326)
T KOG0473|consen 120 KTE 122 (326)
T ss_pred cCc
Confidence 544
No 84
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=89.13 E-value=0.065 Score=27.40 Aligned_cols=18 Identities=33% Similarity=0.553 Sum_probs=9.2
Q ss_pred CCCcEEeCCCCcccccCc
Q psy15002 330 PLLNSLELDGNHIHTVDP 347 (357)
Q Consensus 330 ~~L~~L~L~~N~l~~~~~ 347 (357)
++|+.|+|++|+|++...
T Consensus 2 ~~L~~L~l~~n~i~~~g~ 19 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGA 19 (24)
T ss_dssp TT-SEEE-TSSBEHHHHH
T ss_pred CCCCEEEccCCcCCHHHH
Confidence 456666666666655433
No 85
>KOG3864|consensus
Probab=88.78 E-value=0.082 Score=43.12 Aligned_cols=76 Identities=20% Similarity=0.235 Sum_probs=42.0
Q ss_pred cceEEEccCCcCceeChhhhcCCCCCcEEeccCCcc------ccccCCCCCCCCCCeEECCCC-CCeeeCccccCCCCcC
Q psy15002 139 KLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRI------ALIEEGDFEGKALTQLDLSQN-SLAVVPSPALKSLNHL 211 (357)
Q Consensus 139 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l------~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L 211 (357)
.++.+|-+++.|..+.-+.+.+++.++.|.+.++.- ..+.. ..++|+.|++++| +|++-.-..+..+++|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~---~~~~L~~L~lsgC~rIT~~GL~~L~~lknL 178 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGG---LAPSLQDLDLSGCPRITDGGLACLLKLKNL 178 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcc---cccchheeeccCCCeechhHHHHHHHhhhh
Confidence 477788888877777666677777777777766541 11111 1255555555544 2333332333444455
Q ss_pred ceeecc
Q psy15002 212 LILNLN 217 (357)
Q Consensus 212 ~~L~l~ 217 (357)
+.|.+.
T Consensus 179 r~L~l~ 184 (221)
T KOG3864|consen 179 RRLHLY 184 (221)
T ss_pred HHHHhc
Confidence 544443
No 86
>KOG0473|consensus
Probab=88.29 E-value=0.013 Score=48.65 Aligned_cols=58 Identities=12% Similarity=0.109 Sum_probs=24.7
Q ss_pred ccccEEEccCCcCcccCcccccCCCCCcEEEccCCcCceeCcCcCCCCCCCCEeecCCCc
Q psy15002 258 KKLKRLNLGGNELTRVPQTSLSKLENLRKLELLHNRIALIEEGDFEGLHNLDSLVLAHNQ 317 (357)
Q Consensus 258 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~ 317 (357)
+.+..|+++.|++.-+|. .+.....++.+++..|+.+..|. .+...++++.+++.+|.
T Consensus 65 t~~~rl~~sknq~~~~~~-d~~q~~e~~~~~~~~n~~~~~p~-s~~k~~~~k~~e~k~~~ 122 (326)
T KOG0473|consen 65 TRLVRLDLSKNQIKFLPK-DAKQQRETVNAASHKNNHSQQPK-SQKKEPHPKKNEQKKTE 122 (326)
T ss_pred HHHHHHhccHhhHhhChh-hHHHHHHHHHHHhhccchhhCCc-cccccCCcchhhhccCc
Confidence 344444444444443332 23333444444444444444433 33344444444444444
No 87
>KOG4308|consensus
Probab=87.10 E-value=0.002 Score=60.62 Aligned_cols=180 Identities=23% Similarity=0.218 Sum_probs=97.8
Q ss_pred EEEEEecCCCCcCccccc-----cCCCcccEEEecCCCcceecCccccc----ccccceEEEccCCcCceeCh----hhh
Q psy15002 92 IFYLKLRHNNLPKLTGFI-----FFGLDIRHLTIHNSSLAVVEESSLSS----IGKKLKRLNLGGNELTRVPQ----TSL 158 (357)
Q Consensus 92 l~~L~l~~~~i~~l~~~~-----~~~~~L~~L~l~~~~l~~~~~~~~~~----l~~~L~~L~ls~n~l~~~~~----~~~ 158 (357)
+..+.+.+|.+..-.... -....+..|+++.|.+.......+.. ....+++|++..|.++.... ..+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 566777777776543322 22336777777777776332211111 11346667777777765432 223
Q ss_pred cCCCCCcEEeccCCccc-----cccCCCC----CCCCCCeEECCCCCCeeeCc----cccCCCCc-CceeecccccCccc
Q psy15002 159 SKLENLRKLELLHNRIA-----LIEEGDF----EGKALTQLDLSQNSLAVVPS----PALKSLNH-LLILNLNHNKISAL 224 (357)
Q Consensus 159 ~~l~~L~~L~l~~n~l~-----~~~~~~~----~~~~L~~L~l~~n~l~~~~~----~~~~~l~~-L~~L~l~~n~l~~~ 224 (357)
.....++.++++.|.+. .++.... ...++++|.+.++.++.... ..+...+. +..+++..|++.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 44667777777777662 1111111 23567777777776653221 12333344 55577777766543
Q ss_pred Cc----ccCCCC-CCCCEEEccCCcCcccCCC----ccccccccccEEEccCCcCcc
Q psy15002 225 HS----NAFQGL-DTLEILTIFENKLSLIEPD----SFKGLEKKLKRLNLGGNELTR 272 (357)
Q Consensus 225 ~~----~~l~~l-~~L~~L~L~~n~l~~~~~~----~~~~~~~~L~~L~l~~n~l~~ 272 (357)
.. ..+..+ +.++.+++++|.++.-... ..... .+++.+.+++|.+..
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~-~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSC-RQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhh-HHHHHhhcccCcccc
Confidence 11 223333 5667777777777654332 22233 467777777777654
No 88
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=86.43 E-value=0.44 Score=24.85 Aligned_cols=17 Identities=24% Similarity=0.532 Sum_probs=10.7
Q ss_pred CCcEEeccCCccccccC
Q psy15002 163 NLRKLELLHNRIALIEE 179 (357)
Q Consensus 163 ~L~~L~l~~n~l~~~~~ 179 (357)
+|++|++++|+++.+|+
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 46666666666666654
No 89
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=85.28 E-value=0.73 Score=24.12 Aligned_cols=14 Identities=43% Similarity=0.648 Sum_probs=6.8
Q ss_pred CCcEEeccCCcccc
Q psy15002 163 NLRKLELLHNRIAL 176 (357)
Q Consensus 163 ~L~~L~l~~n~l~~ 176 (357)
+|+.|++++|+|+.
T Consensus 3 ~L~~L~L~~NkI~~ 16 (26)
T smart00365 3 NLEELDLSQNKIKK 16 (26)
T ss_pred ccCEEECCCCccce
Confidence 44455555554443
No 90
>KOG3763|consensus
Probab=78.52 E-value=0.66 Score=43.73 Aligned_cols=36 Identities=28% Similarity=0.422 Sum_probs=15.9
Q ss_pred CCCCEEEccCCcCcccCC-CccccccccccEEEccCC
Q psy15002 233 DTLEILTIFENKLSLIEP-DSFKGLEKKLKRLNLGGN 268 (357)
Q Consensus 233 ~~L~~L~L~~n~l~~~~~-~~~~~~~~~L~~L~l~~n 268 (357)
+.+..+.|++|++..++. ..+....++|..|+|++|
T Consensus 218 p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 218 PEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred cceeeeecccchhhchhhhhHHHHhcchhheeecccc
Confidence 444555555555544422 122222244555555554
No 91
>KOG3763|consensus
Probab=76.06 E-value=1.3 Score=41.77 Aligned_cols=64 Identities=33% Similarity=0.392 Sum_probs=33.8
Q ss_pred CCCcCceeecccccCcccCcc--cCCCCCCCCEEEccCC--cCccc-CCCccccccccccEEEccCCcCcc
Q psy15002 207 SLNHLLILNLNHNKISALHSN--AFQGLDTLEILTIFEN--KLSLI-EPDSFKGLEKKLKRLNLGGNELTR 272 (357)
Q Consensus 207 ~l~~L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~L~~n--~l~~~-~~~~~~~~~~~L~~L~l~~n~l~~ 272 (357)
+.+.+..+.+++|++..+..- .-...|+|+.|+|++| .+... ....+++ ..|++|.+.||.+.+
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~--l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKG--LPLEELVLEGNPLCT 284 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcC--CCHHHeeecCCcccc
Confidence 345666677777766544210 1123467777777777 22211 1123333 256777777776654
No 92
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=75.19 E-value=2.4 Score=22.47 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=11.4
Q ss_pred CCCcEEeCCCCccccc
Q psy15002 330 PLLNSLELDGNHIHTV 345 (357)
Q Consensus 330 ~~L~~L~L~~N~l~~~ 345 (357)
++|+.|||++|.+..-
T Consensus 2 ~~L~~LdL~~N~i~~~ 17 (28)
T smart00368 2 PSLRELDLSNNKLGDE 17 (28)
T ss_pred CccCEEECCCCCCCHH
Confidence 4677888888877654
No 93
>KOG4242|consensus
Probab=73.87 E-value=11 Score=35.24 Aligned_cols=59 Identities=27% Similarity=0.155 Sum_probs=29.7
Q ss_pred cceEEEccCCcCceeChhhh---cCCCCCcEEeccCCccc--cccCCCCCC--CCCCeEECCCCCC
Q psy15002 139 KLKRLNLGGNELTRVPQTSL---SKLENLRKLELLHNRIA--LIEEGDFEG--KALTQLDLSQNSL 197 (357)
Q Consensus 139 ~L~~L~ls~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~--~~~~~~~~~--~~L~~L~l~~n~l 197 (357)
.+++++++.|....-.+... ..-.-++.++.+...++ ..-..++.. .++...+++.|..
T Consensus 215 ~lteldls~n~~Kddip~~~n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~ 280 (553)
T KOG4242|consen 215 WLTELDLSTNGGKDDIPRTLNKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGT 280 (553)
T ss_pred cccccccccCCCCccchhHHHHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCCC
Confidence 47777777776554222211 22234666666666554 111112211 4666666666543
No 94
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=55.24 E-value=9.7 Score=19.56 Aligned_cols=17 Identities=35% Similarity=0.522 Sum_probs=11.3
Q ss_pred CCCCcEEeCCCC-ccccc
Q psy15002 329 LPLLNSLELDGN-HIHTV 345 (357)
Q Consensus 329 ~~~L~~L~L~~N-~l~~~ 345 (357)
+++|+.|+|+++ .+++.
T Consensus 1 c~~L~~L~l~~C~~itD~ 18 (26)
T smart00367 1 CPNLRELDLSGCTNITDE 18 (26)
T ss_pred CCCCCEeCCCCCCCcCHH
Confidence 367778888877 35543
No 95
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=50.02 E-value=11 Score=43.19 Aligned_cols=31 Identities=26% Similarity=0.521 Sum_probs=16.5
Q ss_pred ecCCCcceecCcccccccccceEEEccCCcCc
Q psy15002 120 IHNSSLAVVEESSLSSIGKKLKRLNLGGNELT 151 (357)
Q Consensus 120 l~~~~l~~~~~~~~~~l~~~L~~L~ls~n~l~ 151 (357)
|++|+|+.++...|..+ .+|++|+|++|.+.
T Consensus 2 LSnN~LstLp~g~F~~L-~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 2 ISNNKISTIEEGICANL-CNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCcCCccChHHhccC-CCceEEEeeCCccc
Confidence 44555555555555554 34555555555443
No 96
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=40.87 E-value=16 Score=41.93 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=29.6
Q ss_pred EccCCcCcccCcccccCCCCCcEEEccCCcCcee
Q psy15002 264 NLGGNELTRVPQTSLSKLENLRKLELLHNRIALI 297 (357)
Q Consensus 264 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 297 (357)
||++|+|+.++...|..+++|+.|+|++|.+.--
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CD 34 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECD 34 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccc
Confidence 5789999999999999999999999999976653
No 97
>PF05725 FNIP: FNIP Repeat; InterPro: IPR008615 This repeat is approximately 22 residues long and is only found in Dictyostelium discoideum (Slime mould). It appears to be related to IPR001611 from INTERPRO. The alignment consists of two tandem repeats. It is termed the FNIP repeat after the pattern of conserved residues.
Probab=27.52 E-value=94 Score=18.29 Aligned_cols=7 Identities=43% Similarity=0.491 Sum_probs=2.9
Q ss_pred cccEEEc
Q psy15002 259 KLKRLNL 265 (357)
Q Consensus 259 ~L~~L~l 265 (357)
+++.|.+
T Consensus 13 ~l~~L~~ 19 (44)
T PF05725_consen 13 SLKSLIF 19 (44)
T ss_pred CCeEEEE
Confidence 3444444
No 98
>PF07771 TSGP1: Tick salivary peptide group 1; InterPro: IPR011694 This entry contains a group of peptides derived from a salivary gland cDNA library of the tick Ixodes scapularis (Black-legged tick) []. Also present are peptides from a related tick species, Ixodes ricinus (Sheep tick). They are characterised by a putative signal peptide, indicative of secretion, and conserved cysteine residues.
Probab=21.10 E-value=37 Score=25.48 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=12.5
Q ss_pred HHHHHHHhhhccccccCCCCC
Q psy15002 30 LCLLLLLPCCLLQSVQQCPPH 50 (357)
Q Consensus 30 l~~~~~~~~~~~~~~~~Cp~~ 50 (357)
+++|+.++++...++..||..
T Consensus 7 ~~vlv~la~~~~~~~~~Cp~~ 27 (120)
T PF07771_consen 7 TLVLVSLAFFGSAAAHGCPDK 27 (120)
T ss_pred hhhHHhHHhhhhhhhhcCCCC
Confidence 333344444555677899985
Done!