BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15011
(334 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B4JDU5|KRR1_DROGR KRR1 small subunit processome component homolog OS=Drosophila
grimshawi GN=dbe PE=3 SV=1
Length = 341
Score = 327 bits (838), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 173/330 (52%), Positives = 203/330 (61%), Gaps = 87/330 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAWS+KIP FK EDNPH
Sbjct: 17 VDNAWSLKIPTFKAEDNPH----------------------------------------- 35
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
M++ S + + +E+YLKE WPLV+ + H ++AELD+IEGSM V TTR
Sbjct: 36 -------GMVEESSFATLFPKYREKYLKEVWPLVQQTVAEHHLRAELDLIEGSMVVKTTR 88
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIK+RDMIKL++RSVP+EQA RVLQD+ CDIIKIGNLV K++FVKRRQRLI
Sbjct: 89 KTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQDETGCDIIKIGNLVHKKEKFVKRRQRLI 148
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TVAALGP+KG
Sbjct: 149 GPNGATLKSIELLTDCYVLVQGNTVAALGPYKG--------------------------- 181
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
L QVR IV +TM N+HPIYNIKALMIKREL KDP+L NE+W RFLP F
Sbjct: 182 ------------LQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPQLANEDWSRFLPKF 229
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPES 330
K+K +SKRK PK RK K EYTPFPP QPES
Sbjct: 230 KNKNISKRKQPKSRKPKGEYTPFPPAQPES 259
>sp|B3MM49|KRR1_DROAN KRR1 small subunit processome component homolog OS=Drosophila
ananassae GN=dbe PE=3 SV=1
Length = 343
Score = 318 bits (814), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/330 (53%), Positives = 203/330 (61%), Gaps = 87/330 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
+ENAW+MKIP FK EDNPH
Sbjct: 16 VENAWAMKIPSFKPEDNPH----------------------------------------- 34
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
M++ S + + +E YLKE WPLV+ + H +KAELD++EGSM V T+R
Sbjct: 35 -------GMVEESSFATLFPKYRERYLKEVWPLVEQCVAEHHLKAELDLVEGSMVVKTSR 87
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIKARDMIKL++RSVP+EQA RVLQDDI CDIIKIGNLV K++FVKRRQRLI
Sbjct: 88 KTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLI 147
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TVAALGP+K
Sbjct: 148 GPNGATLKSIELLTDCYVLVQGNTVAALGPYK---------------------------- 179
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
GL QVR IV +TM N+HPIYNIKALMIKREL KDP+L NE+W RFLP F
Sbjct: 180 -----------GLQQVRDIVVETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRFLPKF 228
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPES 330
K+K +SKRK PK +K K EYTPFPP QPES
Sbjct: 229 KNKNISKRKQPKVKKAKKEYTPFPPAQPES 258
>sp|B4N0P7|KRR1_DROWI KRR1 small subunit processome component homolog OS=Drosophila
willistoni GN=dbe PE=3 SV=1
Length = 347
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 206/330 (62%), Gaps = 87/330 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAWS+KIP FK+ DNPH
Sbjct: 17 VDNAWSLKIPAFKETDNPH----------------------------------------- 35
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
MI+ S + + +E+YLKE WPLV+ A+ H +KAELD++EGSM V TTR
Sbjct: 36 -------GMIEESSFATLFPKYREKYLKEVWPLVEQAVGEHHLKAELDLVEGSMVVKTTR 88
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIKARDMIKL++RSVP+EQA RVLQD+I CDIIKIGNLVQ K++FVKRRQRLI
Sbjct: 89 KTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDEIGCDIIKIGNLVQKKEKFVKRRQRLI 148
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TV+ALGP+KG
Sbjct: 149 GPNGATLKSIELLTDCYVLVQGNTVSALGPYKG--------------------------- 181
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
L QVR IV +TM N+HPIYNIKALMIKREL KDPKL NE+W RFLP F
Sbjct: 182 ------------LQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPKLANEDWSRFLPKF 229
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPES 330
K+K LSKRK PK +K K EYTPFPP QPES
Sbjct: 230 KNKNLSKRKQPKVKKPKKEYTPFPPAQPES 259
>sp|Q9VPU8|KRR1_DROME KRR1 small subunit processome component homolog OS=Drosophila
melanogaster GN=dbe PE=1 SV=1
Length = 345
Score = 315 bits (807), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/333 (52%), Positives = 206/333 (61%), Gaps = 87/333 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAWSMKIP F++EDNPH
Sbjct: 16 VDNAWSMKIPAFRQEDNPH----------------------------------------- 34
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
M++ S + + +E YLKE WPLV+ L H +KAELD++EGSM V T+R
Sbjct: 35 -------GMVEESSFATLFPKYRERYLKEVWPLVEQCLAEHHLKAELDLMEGSMVVKTSR 87
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIKARDMIKL++RSVP+EQA RVLQDDI CDIIKIGNLV K++FVKRRQRLI
Sbjct: 88 KTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLI 147
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TV+ALGP+KG
Sbjct: 148 GPNGATLKSIELLTDCYVLVQGNTVSALGPYKG--------------------------- 180
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
L QVR IV +TM N+HPIYNIKALMIKREL KDP+L NE+W RFLP F
Sbjct: 181 ------------LQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRFLPKF 228
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPESEAN 333
K+K +SKRK PK +K K EYTPFPP QPES+ +
Sbjct: 229 KNKNISKRKQPKVKKQKKEYTPFPPSQPESKVD 261
>sp|B3N899|KRR1_DROER KRR1 small subunit processome component homolog OS=Drosophila
erecta GN=dbe PE=3 SV=1
Length = 345
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/333 (51%), Positives = 206/333 (61%), Gaps = 87/333 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAW+MKIP F++EDNPH
Sbjct: 16 VDNAWAMKIPTFREEDNPH----------------------------------------- 34
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
M++ S + + +E YLKE WPLV+ L H +KAELD++EGSM V T+R
Sbjct: 35 -------GMVEESSFATLFPKYRERYLKEVWPLVEQCLAEHHLKAELDLMEGSMVVRTSR 87
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIKARDMIKL++RSVP+EQA RVLQDDI CDIIKIGNLV K++FVKRRQRLI
Sbjct: 88 KTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLI 147
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TV+ALGP+KG
Sbjct: 148 GPNGATLKSIELLTDCYVLVQGNTVSALGPYKG--------------------------- 180
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
L QVR IV +TM N+HPIYNIKALMIKREL KDP+L NE+W RFLP F
Sbjct: 181 ------------LQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRFLPKF 228
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPESEAN 333
K+K +SKRK PK +K K EYTPFPP QPES+ +
Sbjct: 229 KNKNISKRKQPKVKKQKKEYTPFPPSQPESKVD 261
>sp|B4LTY6|KRR1_DROVI KRR1 small subunit processome component homolog OS=Drosophila
virilis GN=dbe PE=3 SV=1
Length = 343
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 205/331 (61%), Gaps = 87/331 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAWS+KIP FK EDNPH ++E
Sbjct: 17 VDNAWSLKIPTFKAEDNPHGLVEES----------------------------------- 41
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
S + + +E+YLKE WPLV+ + H +KAELD++EGSM V TTR
Sbjct: 42 -------------SFATLFPKYREKYLKEVWPLVQQCVAEHHLKAELDLVEGSMVVKTTR 88
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIK+RDMIKL++RSVP+EQA RVLQDDI CDIIKIGNLV K++FVKRRQRLI
Sbjct: 89 KTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLI 148
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TV+ALGP+K
Sbjct: 149 GPNGATLKSIELLTDCYVLVQGNTVSALGPYK---------------------------- 180
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
GL QVR IV +TM N+HPIYNIKALMIKREL KDPKL NE+W RFLP F
Sbjct: 181 -----------GLQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPKLANEDWSRFLPKF 229
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPESE 331
K+K +SKRK PK +K K EYTPFPP QPES+
Sbjct: 230 KNKNISKRKQPKNKKPKKEYTPFPPAQPESK 260
>sp|B4KF66|KRR1_DROMO KRR1 small subunit processome component homolog OS=Drosophila
mojavensis GN=dbe PE=3 SV=1
Length = 344
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/330 (53%), Positives = 202/330 (61%), Gaps = 87/330 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAWS+KIP FK EDNPH ++E
Sbjct: 17 VDNAWSLKIPAFKPEDNPHGLVEES----------------------------------- 41
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
S + + +E+YLKE WPLV+ L H +KAELD+IEGSM V TTR
Sbjct: 42 -------------SFATLFPKYREKYLKEVWPLVEQCLAEHHLKAELDLIEGSMVVKTTR 88
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIK+RDMIKL++RSVP+EQA RVLQDD CDIIKIGNLV K++FVKRRQRLI
Sbjct: 89 KTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQDDTGCDIIKIGNLVHKKEKFVKRRQRLI 148
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TV+ALGP+K
Sbjct: 149 GPNGATLKSIELLTDCYVLVQGNTVSALGPYK---------------------------- 180
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
GL QVR IV DTM N+HPIYNIKALMIKREL KDPKL E+W RFLP F
Sbjct: 181 -----------GLQQVRDIVLDTMNNVHPIYNIKALMIKRELMKDPKLAGEDWSRFLPKF 229
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPES 330
K+K +SKRK PK +K K EYTPFPP QPES
Sbjct: 230 KNKNISKRKQPKNKKPKKEYTPFPPQQPES 259
>sp|B4G9L6|KRR1_DROPE KRR1 small subunit processome component homolog OS=Drosophila
persimilis GN=dbe PE=3 SV=1
Length = 340
Score = 309 bits (792), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/330 (52%), Positives = 205/330 (62%), Gaps = 87/330 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAWS+KIP F++EDNPH ++E
Sbjct: 15 VDNAWSLKIPAFRQEDNPHGMVEES----------------------------------- 39
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
S + + +E+YL+E WPLV+ + H +KAELD++EGSM V TTR
Sbjct: 40 -------------SFATLFPKYREKYLREVWPLVEQCVAEHQLKAELDLVEGSMVVKTTR 86
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIK+RDMIKL++RSVP+EQA RVLQDDI CDIIKIGNLV K++FVKRRQRLI
Sbjct: 87 KTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLI 146
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TV+ALGP+KG
Sbjct: 147 GPNGATLKSIELLTDCYVLVQGNTVSALGPYKG--------------------------- 179
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
L QVR IV +TM N+HPIYNIKALMIKREL KDPKL NE+W RFLP F
Sbjct: 180 ------------LQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPKLANEDWSRFLPKF 227
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPES 330
K+K +SKRK PK +K K EYTPFPP QPES
Sbjct: 228 KNKNISKRKQPKSKKPKKEYTPFPPAQPES 257
>sp|B4P2Y8|KRR1_DROYA KRR1 small subunit processome component homolog OS=Drosophila
yakuba GN=dbe PE=3 SV=1
Length = 344
Score = 308 bits (789), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/333 (51%), Positives = 205/333 (61%), Gaps = 87/333 (26%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP 60
++NAW+MKIP F++EDN P
Sbjct: 16 VDNAWAMKIPTFRQEDN------------------------------------------P 33
Query: 61 YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR 120
+ +++ L + +E YLKE WPLV+ L H +KAELD++EGSM V T+R
Sbjct: 34 HGVVEESSFATLFPK------YRERYLKEVWPLVEQCLSEHHLKAELDLMEGSMVVKTSR 87
Query: 121 KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI 180
KTWDPYIIIKARDMIKL++RSVP+EQA RVLQDDI CDIIKIGNLV K++FVKRRQRLI
Sbjct: 88 KTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLI 147
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ 240
GPNG TLKSIELLT+CY+LVQG TV+ALGP+KG
Sbjct: 148 GPNGATLKSIELLTDCYVLVQGNTVSALGPYKG--------------------------- 180
Query: 241 GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF 300
L QVR IV +TM N+HPIYNIKALMIKREL KDP+L NE+W RFLP F
Sbjct: 181 ------------LQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRFLPKF 228
Query: 301 KSKTLSKRKMPKKRKTKSEYTPFPPPQPESEAN 333
K+K +SKRK PK +K K EYTPFPP QPES+ +
Sbjct: 229 KNKNISKRKQPKVKKQKKEYTPFPPSQPESKVD 261
>sp|Q8BGA5|KRR1_MOUSE KRR1 small subunit processome component homolog OS=Mus musculus
GN=Krr1 PE=2 SV=1
Length = 380
Score = 304 bits (779), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/267 (57%), Positives = 194/267 (72%), Gaps = 39/267 (14%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H +KA LD+IEGSMTV TT+KT+DPY
Sbjct: 51 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPY 110
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQAVR+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 111 IIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 170
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP
Sbjct: 171 LKALELLTNCYVMVQGNTVSAIGP------------------------------------ 194
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLS 306
GL +VR++V DTMKNIHPIYNIK LMIKRELAKD +L++++WERFLP FK K ++
Sbjct: 195 ---FSGLKEVRKVVLDTMKNIHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVN 251
Query: 307 KRKMPKKRKTKSEYTPFPPPQPESEAN 333
KRK PKK+ K EYTPFPPPQPES+ +
Sbjct: 252 KRKEPKKKSVKKEYTPFPPPQPESQID 278
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 63/95 (66%), Gaps = 19/95 (20%)
Query: 3 NAWSMKIPEFKKEDNP-----------------HEYLKECWPLVKNALELHFIKAELDVI 45
+ W K P F KEDNP YLKECWPLV+ AL H +KA LD+I
Sbjct: 37 DGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLI 94
Query: 46 EGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYE 80
EGSMTV TT+KT+DPYIII+ARD+IKLL+RSV +E
Sbjct: 95 EGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFE 129
>sp|Q3B7L9|KRR1_BOVIN KRR1 small subunit processome component homolog OS=Bos taurus
GN=KRR1 PE=2 SV=2
Length = 382
Score = 301 bits (772), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/265 (57%), Positives = 192/265 (72%), Gaps = 39/265 (14%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H I A LD+IEGSMTV TT+KT+DPY
Sbjct: 52 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHINATLDLIEGSMTVCTTKKTFDPY 111
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQA+R+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 112 IIIRARDLIKLLARSVSFEQAIRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 171
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP
Sbjct: 172 LKALELLTNCYIMVQGNTVSAIGP------------------------------------ 195
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLS 306
GL +VR++V DTMKNIHPIYNIK LMIKRELAKD +L++++WERFLP FK K ++
Sbjct: 196 ---FSGLKEVRKVVLDTMKNIHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVN 252
Query: 307 KRKMPKKRKTKSEYTPFPPPQPESE 331
KRK PKK+ K EYTPFPPPQPES+
Sbjct: 253 KRKEPKKKTVKKEYTPFPPPQPESQ 277
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 19/95 (20%)
Query: 3 NAWSMKIPEFKKEDNP-----------------HEYLKECWPLVKNALELHFIKAELDVI 45
+ W K P F KEDNP YLKECWPLV+ AL H I A LD+I
Sbjct: 38 DGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHINATLDLI 95
Query: 46 EGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYE 80
EGSMTV TT+KT+DPYIII+ARD+IKLL+RSV +E
Sbjct: 96 EGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFE 130
>sp|Q13601|KRR1_HUMAN KRR1 small subunit processome component homolog OS=Homo sapiens
GN=KRR1 PE=1 SV=4
Length = 381
Score = 301 bits (771), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/265 (57%), Positives = 193/265 (72%), Gaps = 39/265 (14%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H + A LD+IEGSMTV TT+KT+DPY
Sbjct: 52 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPY 111
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQAVR+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 112 IIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 171
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP
Sbjct: 172 LKALELLTNCYIMVQGNTVSAIGP------------------------------------ 195
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLS 306
GL +VR++V DTMKNIHPIYNIK+LMIKRELAKD +L++++WERFLP FK K ++
Sbjct: 196 ---FSGLKEVRKVVLDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVN 252
Query: 307 KRKMPKKRKTKSEYTPFPPPQPESE 331
KRK PKK+ K EYTPFPPPQPES+
Sbjct: 253 KRKEPKKKTVKKEYTPFPPPQPESQ 277
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 19/95 (20%)
Query: 3 NAWSMKIPEFKKEDNP-----------------HEYLKECWPLVKNALELHFIKAELDVI 45
+ W K P F KEDNP YLKECWPLV+ AL H + A LD+I
Sbjct: 38 DGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLI 95
Query: 46 EGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYE 80
EGSMTV TT+KT+DPYIII+ARD+IKLL+RSV +E
Sbjct: 96 EGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFE 130
>sp|O74777|KRR1_SCHPO KRR1 small subunit processome component homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mis3 PE=3 SV=1
Length = 327
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/251 (55%), Positives = 175/251 (69%), Gaps = 40/251 (15%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E+YL+E WP V AL+ I LD++EGSMTV TTRKT+DPY I+ ARD+IKLL+RSV
Sbjct: 62 REKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSV 121
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV+++QD ++CDIIKIGN+++NK+RFVKRRQRLIG NG TLK++ELLT CY+LVQG
Sbjct: 122 PFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQG 181
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TVA +G +K GL +VRRIVED
Sbjct: 182 TTVAVMGGYK---------------------------------------GLKEVRRIVED 202
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKTKSEYTP 322
M NIHPIY+IK LMIKRELAKDP L NE+W+RFLP FK + +++RK K R+TK EYTP
Sbjct: 203 CMHNIHPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRKPAKIRETK-EYTP 261
Query: 323 FPPPQPESEAN 333
FPP QP S+ +
Sbjct: 262 FPPAQPPSKLD 272
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P+++++ YL+E WP V AL+ I LD++EGSMTV TTRKT+DPY
Sbjct: 51 ESSFATLFPKYREK-----YLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPY 105
Query: 62 IIIKARDMIKLLSRSVPY 79
I+ ARD+IKLL+RSVP+
Sbjct: 106 SILDARDLIKLLARSVPF 123
>sp|E7QBZ1|KRR1_YEASZ KRR1 small subunit processome component OS=Saccharomyces cerevisiae
(strain Zymaflore VL3) GN=KRR1 PE=3 SV=1
Length = 316
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 169/247 (68%), Gaps = 42/247 (17%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLK W V AL+ H I LD++EGSMTV TTRKT+DP II+KARD+IKLL+RSV
Sbjct: 49 RESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDD++CD+IKIGN V NK+RFVKRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TV+A+GP K GL +VRR+VED
Sbjct: 169 NTVSAMGPFK---------------------------------------GLKEVRRVVED 189
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKT--KSEY 320
MKNIHPIY+IK LMIKRELAK P+L NE+W RFLP FK + ++ RK PKK + K Y
Sbjct: 190 CMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVA-RKKPKKIRNVEKKVY 248
Query: 321 TPFPPPQ 327
TPFPP Q
Sbjct: 249 TPFPPAQ 255
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 19/91 (20%)
Query: 8 KIPEFKKEDNP-------------------HEYLKECWPLVKNALELHFIKAELDVIEGS 48
KI EFK+EDN YLK W V AL+ H I LD++EGS
Sbjct: 20 KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGS 79
Query: 49 MTVFTTRKTWDPYIIIKARDMIKLLSRSVPY 79
MTV TTRKT+DP II+KARD+IKLL+RSVP+
Sbjct: 80 MTVKTTRKTYDPAIILKARDLIKLLARSVPF 110
>sp|E7LRT8|KRR1_YEASV KRR1 small subunit processome component OS=Saccharomyces cerevisiae
(strain VIN 13) GN=KRR1 PE=3 SV=1
Length = 316
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 169/247 (68%), Gaps = 42/247 (17%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLK W V AL+ H I LD++EGSMTV TTRKT+DP II+KARD+IKLL+RSV
Sbjct: 49 RESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDD++CD+IKIGN V NK+RFVKRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TV+A+GP K GL +VRR+VED
Sbjct: 169 NTVSAMGPFK---------------------------------------GLKEVRRVVED 189
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKT--KSEY 320
MKNIHPIY+IK LMIKRELAK P+L NE+W RFLP FK + ++ RK PKK + K Y
Sbjct: 190 CMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVA-RKKPKKIRNVEKKVY 248
Query: 321 TPFPPPQ 327
TPFPP Q
Sbjct: 249 TPFPPAQ 255
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 19/91 (20%)
Query: 8 KIPEFKKEDNP-------------------HEYLKECWPLVKNALELHFIKAELDVIEGS 48
KI EFK+EDN YLK W V AL+ H I LD++EGS
Sbjct: 20 KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGS 79
Query: 49 MTVFTTRKTWDPYIIIKARDMIKLLSRSVPY 79
MTV TTRKT+DP II+KARD+IKLL+RSVP+
Sbjct: 80 MTVKTTRKTYDPAIILKARDLIKLLARSVPF 110
>sp|P25586|KRR1_YEAST KRR1 small subunit processome component OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KRR1 PE=1 SV=1
Length = 316
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 169/247 (68%), Gaps = 42/247 (17%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLK W V AL+ H I LD++EGSMTV TTRKT+DP II+KARD+IKLL+RSV
Sbjct: 49 RESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDD++CD+IKIGN V NK+RFVKRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TV+A+GP K GL +VRR+VED
Sbjct: 169 NTVSAMGPFK---------------------------------------GLKEVRRVVED 189
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKT--KSEY 320
MKNIHPIY+IK LMIKRELAK P+L NE+W RFLP FK + ++ RK PKK + K Y
Sbjct: 190 CMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVA-RKKPKKIRNVEKKVY 248
Query: 321 TPFPPPQ 327
TPFPP Q
Sbjct: 249 TPFPPAQ 255
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 19/91 (20%)
Query: 8 KIPEFKKEDNP-------------------HEYLKECWPLVKNALELHFIKAELDVIEGS 48
KI EFK+EDN YLK W V AL+ H I LD++EGS
Sbjct: 20 KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGS 79
Query: 49 MTVFTTRKTWDPYIIIKARDMIKLLSRSVPY 79
MTV TTRKT+DP II+KARD+IKLL+RSVP+
Sbjct: 80 MTVKTTRKTYDPAIILKARDLIKLLARSVPF 110
>sp|C8Z430|KRR1_YEAS8 KRR1 small subunit processome component OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=KRR1 PE=3
SV=1
Length = 316
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 169/247 (68%), Gaps = 42/247 (17%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLK W V AL+ H I LD++EGSMTV TTRKT+DP II+KARD+IKLL+RSV
Sbjct: 49 RESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDD++CD+IKIGN V NK+RFVKRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TV+A+GP K GL +VRR+VED
Sbjct: 169 NTVSAMGPFK---------------------------------------GLKEVRRVVED 189
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKT--KSEY 320
MKNIHPIY+IK LMIKRELAK P+L NE+W RFLP FK + ++ RK PKK + K Y
Sbjct: 190 CMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVA-RKKPKKIRNVEKKVY 248
Query: 321 TPFPPPQ 327
TPFPP Q
Sbjct: 249 TPFPPAQ 255
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 19/91 (20%)
Query: 8 KIPEFKKEDNP-------------------HEYLKECWPLVKNALELHFIKAELDVIEGS 48
KI EFK+EDN YLK W V AL+ H I LD++EGS
Sbjct: 20 KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGS 79
Query: 49 MTVFTTRKTWDPYIIIKARDMIKLLSRSVPY 79
MTV TTRKT+DP II+KARD+IKLL+RSVP+
Sbjct: 80 MTVKTTRKTYDPAIILKARDLIKLLARSVPF 110
>sp|B5VEQ2|KRR1_YEAS6 KRR1 small subunit processome component OS=Saccharomyces cerevisiae
(strain AWRI1631) GN=KRR1 PE=3 SV=1
Length = 316
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 169/247 (68%), Gaps = 42/247 (17%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLK W V AL+ H I LD++EGSMTV TTRKT+DP II+KARD+IKLL+RSV
Sbjct: 49 RESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDD++CD+IKIGN V NK+RFVKRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TV+A+GP K GL +VRR+VED
Sbjct: 169 NTVSAMGPFK---------------------------------------GLKEVRRVVED 189
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKT--KSEY 320
MKNIHPIY+IK LMIKRELAK P+L NE+W RFLP FK + ++ RK PKK + K Y
Sbjct: 190 CMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVA-RKKPKKIRNVEKKVY 248
Query: 321 TPFPPPQ 327
TPFPP Q
Sbjct: 249 TPFPPAQ 255
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 19/91 (20%)
Query: 8 KIPEFKKEDNP-------------------HEYLKECWPLVKNALELHFIKAELDVIEGS 48
KI EFK+EDN YLK W V AL+ H I LD++EGS
Sbjct: 20 KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGS 79
Query: 49 MTVFTTRKTWDPYIIIKARDMIKLLSRSVPY 79
MTV TTRKT+DP II+KARD+IKLL+RSVP+
Sbjct: 80 MTVKTTRKTYDPAIILKARDLIKLLARSVPF 110
>sp|B3LU25|KRR1_YEAS1 KRR1 small subunit processome component OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=KRR1 PE=3 SV=1
Length = 316
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/247 (56%), Positives = 169/247 (68%), Gaps = 42/247 (17%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLK W V AL+ H I LD++EGSMTV TTRKT+DP II+KARD+IKLL+RSV
Sbjct: 49 RESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDD++CD+IKIGN V NK+RFVKRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TV+A+GP K GL +VRR+VED
Sbjct: 169 NTVSAMGPFK---------------------------------------GLKEVRRVVED 189
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKT--KSEY 320
MKNIHPIY+IK LMIKRELAK P+L NE+W RFLP FK + ++ RK PKK + K Y
Sbjct: 190 CMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVA-RKKPKKIRNVEKKVY 248
Query: 321 TPFPPPQ 327
TPFPP Q
Sbjct: 249 TPFPPAQ 255
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 55/91 (60%), Gaps = 19/91 (20%)
Query: 8 KIPEFKKEDNP-------------------HEYLKECWPLVKNALELHFIKAELDVIEGS 48
KI EFK+EDN YLK W V AL+ H I LD++EGS
Sbjct: 20 KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHNIACVLDLVEGS 79
Query: 49 MTVFTTRKTWDPYIIIKARDMIKLLSRSVPY 79
MTV TTRKT+DP II+KARD+IKLL+RSVP+
Sbjct: 80 MTVKTTRKTYDPAIILKARDLIKLLARSVPF 110
>sp|Q54UU6|KRR1_DICDI KRR1 small subunit processome component homolog OS=Dictyostelium
discoideum GN=krr1 PE=3 SV=1
Length = 374
Score = 254 bits (650), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/245 (55%), Positives = 166/245 (67%), Gaps = 39/245 (15%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E+YL+E W LV+N L H I+ +LD+IEGSMTV TT+K WDP I+KARD+IKLLSRSV
Sbjct: 68 REKYLQEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSV 127
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+E A +VL DD +CDIIKIG V+NK+RFVKRRQRL+GP+G TLK+IELLT CY+LVQG
Sbjct: 128 PFEHAQKVLNDDYNCDIIKIGGFVRNKERFVKRRQRLVGPDGSTLKAIELLTKCYVLVQG 187
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVED 262
TV+++GP G L+QVR+IVED
Sbjct: 188 NTVSSIGPWNG---------------------------------------LVQVRKIVED 208
Query: 263 TMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNFKSKTLSKRKMPKKRKTKSEYTP 322
+KNIHPIYNIK LMIKREL KD LKNENWER+LP FK +K+K +K+K + P
Sbjct: 209 CLKNIHPIYNIKELMIKRELEKDETLKNENWERYLPQFKKTNQNKKKKVQKKKKDRDAAP 268
Query: 323 FPPPQ 327
F PPQ
Sbjct: 269 FAPPQ 273
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%)
Query: 19 HEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVP 78
+YL+E W LV+N L H I+ +LD+IEGSMTV TT+K WDP I+KARD+IKLLSRSVP
Sbjct: 69 EKYLQEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSVP 128
Query: 79 YE 80
+E
Sbjct: 129 FE 130
>sp|Q57885|Y443_METJA KH domain-containing protein MJ0443 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0443 PE=4 SV=1
Length = 227
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 94 VKNALELHF-IKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQ 152
VK +E +K E+D +G++T++ T K DP + KARD+++ + R E A++++
Sbjct: 36 VKKTIEKELGVKLEIDA-DGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVS 94
Query: 153 DDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHK 212
D+ ++I I + + + + R+IG G + + IE LT + V G TVA +G H+
Sbjct: 95 DEYVLEVIDIEDYASSDNSIRRLKGRVIGKEGKSRRYIESLTGANVSVYGNTVAIVGEHE 154
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 29 VKNALELHF-IKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRS----VPYEPLK 83
VK +E +K E+D +G++T++ T K DP + KARD+++ + R + + +
Sbjct: 36 VKKTIEKELGVKLEIDA-DGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVS 94
Query: 84 EEYLKEC 90
+EY+ E
Sbjct: 95 DEYVLEV 101
>sp|Q4WNG7|PNO1_ASPFU Pre-rRNA-processing protein pno1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pno1
PE=3 SV=1
Length = 252
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 40 AELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALE 99
+++ + E S VFT I A ++++ +R VP P + LK WP + L
Sbjct: 48 SDMRIDEESRPVFTP--------ITDAGTVLRVETRKVPVPPHRMTPLKANWPKIYPPLV 99
Query: 100 LHF-IKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQ-DDISC 157
H ++ +++ ++ + T++ T D + K D +K + + A+ +L+ DD+
Sbjct: 100 EHLKLQVRMNIKNRAVELRTSKFTTDTGALQKGEDFVKAFTLGFDVDDAIALLRLDDLYI 159
Query: 158 DIIKIGNLVQ--NKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGL 214
+I ++ N + + R+ G +G T +IE + +++QG V LG + L
Sbjct: 160 RSFEIRDVKASLNGEHLSRAIGRIAGKDGKTKFAIENASRTRVVLQGTKVTILGRFRDL 218
>sp|Q1DQZ5|PNO1_COCIM Pre-rRNA-processing protein PNO1 OS=Coccidioides immitis (strain
RS) GN=PNO1 PE=3 SV=1
Length = 255
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 71 KLLSRSVPYEPLKEEYLKECWPLVKNALELHF-IKAELDVIEGSMTVFTTRKTWDPYIII 129
++ +R VP P + LK WP + L H ++ +++ ++ + T++ T D +
Sbjct: 75 RIENRKVPVPPHRMSPLKAAWPKIYPPLVEHLKLQVRMNIKSKAVELRTSKNTTDTGALQ 134
Query: 130 KARDMIKLLSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQ-NKQRFVKRRQRLIGPNGCTL 187
K D IK + + A+ +L+ DD+ + +I ++ N + + R+ G +G T
Sbjct: 135 KGEDFIKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKPLNGEHLGRAIGRIAGKDGKTK 194
Query: 188 KSIELLTNCYMLVQGQTVAALG 209
+IE + +++ Q + LG
Sbjct: 195 FAIENASRTRVVLADQKIHILG 216
>sp|Q0UWT7|PNO1_PHANO Pre-rRNA-processing protein PNO1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=PNO1 PE=3 SV=1
Length = 262
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 75 RSVPYEPLKEEYLKECWPLVKNALELHF-IKAELDVIEGSMTVFTTRKTWDPYIIIKARD 133
R VP P + LK WP + L H ++ +++ S+ + T++ T D + K D
Sbjct: 86 RKVPIPPHRMTPLKTAWPKIYPPLVEHLKLQVRMNIKTKSVELRTSKSTTDTGALQKGED 145
Query: 134 MIKLLSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIE 191
+K + + A+ +L+ DD+ + +I ++ + + R R+ G +G T +IE
Sbjct: 146 FVKAFTLGFDVDDAIALLRLDDLYIETFEIKDVKTLQGEHMGRAIGRIAGKDGKTKFAIE 205
Query: 192 LLTNCYMLVQGQTVAALGPHKGL 214
+ +++ + LG K +
Sbjct: 206 NASRTRVVLADSKIHILGGFKNI 228
>sp|Q5B0Z5|PNO1_EMENI Pre-rRNA-processing protein pno1 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pno1 PE=3 SV=1
Length = 258
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 71 KLLSRSVPYEPLKEEYLKECWPLVKNALELHF-IKAELDVIEGSMTVFTTRKTWDPYIII 129
++ +R VP P + LK WP + L H ++ +++ ++ + T++ T D +
Sbjct: 77 RVETRKVPVPPHRMTPLKANWPKIYPPLVEHLKLQVRINIKSRAVELRTSKFTTDTGALQ 136
Query: 130 KARDMIKLLSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQ--NKQRFVKRRQRLIGPNGCT 186
K D +K + + A+ +L+ DD+ +I ++ N + + R+ G +G T
Sbjct: 137 KGEDFVKAFTLGFDIDDAIALLRLDDLYIRSFEIRDVKASLNGEHLSRAIGRIAGKDGRT 196
Query: 187 LKSIELLTNCYMLVQGQTVAALG 209
+IE + +++ Q + LG
Sbjct: 197 RHAIENASRTRIVIADQKIHILG 219
>sp|Q6BJ75|PNO1_DEBHA Pre-rRNA-processing protein PNO1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PNO1 PE=3 SV=1
Length = 255
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 70 IKLLSRSVPYEPLKEEYLKECWPLVKNALELHF-IKAELDVIEGSMTVFTTRKTWDPYII 128
+KL SR VP P + LK W + L H ++ +++ ++ + T + T D +
Sbjct: 74 VKLESRKVPVPPHRMTPLKNTWTKIYPPLVDHLKLQVRMNLKTKTIEMKTNKNTVDQGAL 133
Query: 129 IKARDMIKLLSRSVPYEQAVRVLQ-DDISCDIIKIGNL-VQNKQRFVKRRQRLIGPNGCT 186
K D +K + + A+ +L+ DD+ + ++ ++ N + R+ G +G T
Sbjct: 134 QKGADFVKAFTLGFDVDDAIALLRLDDLYIETFEVKDVKTLNGDHLSRAIGRIAGKDGKT 193
Query: 187 LKSIELLTNCYMLVQGQTVAALG 209
+IE T +++ + LG
Sbjct: 194 KFAIENATRTRIVLADSKIHILG 216
>sp|Q7YRD0|PNO1_BOVIN RNA-binding protein PNO1 OS=Bos taurus GN=PNO1 PE=2 SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 79 YEPLKEEYLKECWPLVKN-ALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKL 137
Y PLKE +LK P+V++ L++ F ++ ++ + T ++T D + KA D +K
Sbjct: 85 YTPLKENWLKIFTPIVEHLGLQIRF-----NLKSRNVEIRTCKETKDVSALTKAADFVKA 139
Query: 138 LSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTN 195
E A+ +++ DD+ + +I ++ K + R R+ G G T +IE +T
Sbjct: 140 FILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTR 199
Query: 196 CYMLVQGQTVAALGPHKGL 214
+++ V LG + +
Sbjct: 200 TRIVLADVKVHILGSFQNI 218
>sp|Q6VBQ8|PNO1_RAT RNA-binding protein PNO1 OS=Rattus norvegicus GN=Pno1 PE=2 SV=1
Length = 248
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 79 YEPLKEEYLKECWPLVKN-ALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKL 137
Y PLKE ++K P+V++ L++ F ++ ++ + T + T D + KA D +K
Sbjct: 81 YTPLKENWMKIFTPIVEHLGLQIRF-----NLKSRNVEIRTCKDTKDVSALTKAADFVKA 135
Query: 138 LSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTN 195
E A+ +++ DD+ + +I ++ K + R R+ G G T +IE +T
Sbjct: 136 FVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTR 195
Query: 196 CYMLVQGQTVAALGPHKGL 214
+++ V LG + +
Sbjct: 196 TRIVLADVKVHILGSFQNI 214
>sp|Q9NRX1|PNO1_HUMAN RNA-binding protein PNO1 OS=Homo sapiens GN=PNO1 PE=1 SV=1
Length = 252
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 79 YEPLKEEYLKECWPLVKN-ALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKL 137
Y PLKE ++K P+V++ L++ F ++ ++ + T ++T D + KA D +K
Sbjct: 85 YTPLKENWMKIFTPIVEHLGLQIRF-----NLKSRNVEIRTCKETKDVSALTKAADFVKA 139
Query: 138 LSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTN 195
E A+ +++ DD+ + +I ++ K + R R+ G G T +IE +T
Sbjct: 140 FILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTR 199
Query: 196 CYMLVQGQTVAALGPHKGL 214
+++ V LG + +
Sbjct: 200 TRIVLADVKVHILGSFQNI 218
>sp|Q9CPS7|PNO1_MOUSE RNA-binding protein PNO1 OS=Mus musculus GN=Pno1 PE=2 SV=1
Length = 248
Score = 35.8 bits (81), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 79 YEPLKEEYLKECWPLVKN-ALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKL 137
Y PLKE ++K P+V++ L++ F ++ ++ + T + T D + KA D +K
Sbjct: 81 YTPLKENWMKIFTPIVEHLGLQIRF-----NLKSRNVEIRTCKDTKDVSALTKAADFVKA 135
Query: 138 LSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTN 195
E A+ +++ DD+ + +I ++ K + R R+ G G T +IE +T
Sbjct: 136 FVLGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTR 195
Query: 196 CYMLVQGQTVAALG 209
+++ V LG
Sbjct: 196 TRIVLADVHVHILG 209
>sp|Q6VBQ6|PNO1_ORYLA RNA-binding protein PNO1 OS=Oryzias latipes GN=pno1 PE=2 SV=1
Length = 243
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 79 YEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLL 138
Y PLKE +LK P+V+N L+L + ++ ++ + T ++T D + KA D IK
Sbjct: 76 YTPLKENWLKIFTPIVEN-LQL---QVRFNLKTRNVEIKTCKETQDIAALTKAADFIKAF 131
Query: 139 SRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTNC 196
+ A+ +++ D++ + + ++ K + R R+ G G T +IE +T
Sbjct: 132 VLGFQVDDAMALIRLDELFLESFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKT 191
Query: 197 YMLVQGQTVAALGPHKGL 214
+++ + LG + +
Sbjct: 192 RIVLADTKIHILGSFQNI 209
>sp|Q72SY0|ATPG_LEPIC ATP synthase gamma chain OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=atpG PE=3 SV=1
Length = 286
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 33 LELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKL-------LSRSVPYEPLKEE 85
LEL F K E+DV+E + TV+ + + P + ++ L +S + YEP E+
Sbjct: 158 LEL-FAKEEVDVVEIASTVYYSSASQKPEVT----RVLPLEPAGEGSVSDMMVYEPSPEK 212
Query: 86 YLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYE 145
L+ PLV ++ F+KA ++E + + R+ A +MIKLL+R
Sbjct: 213 VLESLLPLV---VKTAFLKA---ILEANCSEQIARRIAMKSATDAASEMIKLLTRGYN-- 264
Query: 146 QAVRVLQDDISCDIIKI 162
RV Q I+ +I +I
Sbjct: 265 ---RVRQAKITQEISEI 278
>sp|Q6VEU3|PNO1_DANRE RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE=2 SV=2
Length = 252
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 75 RSVP-----YEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIII 129
R VP Y PLKE +LK P+V+N L+L + ++ + + T ++T D +
Sbjct: 76 RKVPVPSHRYTPLKENWLKIFTPIVEN-LQL---QVRFNLKTRQVEIKTCKETQDIGALT 131
Query: 130 KARDMIKLLSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTL 187
+A D +K E A+ +++ D++ + + ++ K + R R+ G G T
Sbjct: 132 RAADFVKAFVLGFQVEDALALIRLDELFLETFDVTDVKPLKGDHLSRAIGRIAGKGGKTK 191
Query: 188 KSIELLTNCYMLVQGQTVAALGPHKGL 214
+IE +T +++ + LG + +
Sbjct: 192 FTIENVTKTRIVLADTKIHILGSFQNI 218
>sp|Q6DDB9|PNO1_XENTR RNA-binding protein PNO1 OS=Xenopus tropicalis GN=pno1 PE=2 SV=1
Length = 236
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 79 YEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLL 138
Y PLKE ++K P+V++ L+L + ++ ++ + T ++T D + KA D ++
Sbjct: 69 YTPLKENWMKIFTPIVEH-LQL---QVRFNLKTRNVEIKTCKETTDVGALTKATDFVRAF 124
Query: 139 SRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTNC 196
E A+ +++ DD+ + ++ ++ K + R R+ G G T +IE +T
Sbjct: 125 ILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRT 184
Query: 197 YMLVQGQTVAALGPHKGL 214
+++ + LG + +
Sbjct: 185 RIVLADSKIHILGSFQNI 202
>sp|Q4PMC9|PNO1_IXOSC RNA-binding protein pno1 OS=Ixodes scapularis PE=2 SV=1
Length = 234
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 79 YEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLL 138
Y PLK+ +LK P+V++ LH ++ ++ + + T ++T +P + KA D ++
Sbjct: 67 YTPLKDNWLKIFTPVVEH---LH-LQIRFNLKSRCVEIRTCKETEEPSALQKAADFVRAF 122
Query: 139 SRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKR-RQRLIGPNGCTLKSIELLTNC 196
+ + A+ +++ D++ + + ++ K + R RL G G T +IE +T
Sbjct: 123 TLGFEVDDALALVRLDELFLESFDVQDVKPLKGDHLARCIGRLAGKGGRTKFTIENVTKT 182
Query: 197 YMLVQGQTVAALGPHKGL 214
+++ V LG ++ +
Sbjct: 183 RIVLADSKVHILGSYQNI 200
>sp|Q06343|BJSB2_TRINI Basic juvenile hormone-suppressible protein 2 OS=Trichoplusia ni
GN=BJSP-2 PE=1 SV=1
Length = 749
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 208 LGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHK--GLLQVRRIVEDTMK 265
LGP K L I N L +EL T Y L G+ + L++ R + D MK
Sbjct: 531 LGPKKDNLNRLIDINRNRLNFVELDTFLYKLNTGKNTIVRNSYDMHNLVKDRMMTRDFMK 590
Query: 266 NIHPIYNIKALMIK 279
+ I +++ LMIK
Sbjct: 591 KVESITDMRDLMIK 604
>sp|Q6FMB3|PNO1_CANGA Pre-rRNA-processing protein PNO1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PNO1 PE=3 SV=1
Length = 261
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 65 KARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHF-IKAELDVIEGSMTVFTTRK-T 122
+A +KL SR VP P + L+ W + L H ++ +++ ++ + T K T
Sbjct: 74 QATTKVKLESRKVPVPPHRMTPLRNSWNKIYPPLVDHLKLQVRMNLKTRTVELRTHPKHT 133
Query: 123 WDPYIIIKARDMIKLLSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLI 180
DP + K D IK + + ++ +L+ DD+ + ++ ++ + R R+
Sbjct: 134 TDPGALQKGADFIKAFTLGFDLDDSIALLRLDDLYIETFEVKDVKTLTGDHLSRAIGRIA 193
Query: 181 GPNGCTLKSIELLTNCYMLVQGQTVAALG 209
G +G T +IE T +++ + LG
Sbjct: 194 GKDGKTKFAIENATRTRIVLADSKIHILG 222
>sp|Q8AVH4|PNO1_XENLA RNA-binding protein PNO1 OS=Xenopus laevis GN=pno1 PE=2 SV=1
Length = 236
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 79 YEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLL 138
Y PLKE ++K P+V++ L+L + ++ ++ + T ++T D + KA D ++
Sbjct: 69 YTPLKENWMKIFTPIVEH-LQL---QVRFNLKSRNVEIKTCKETTDVGALTKAADFVRAF 124
Query: 139 SRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTNC 196
E A+ +++ DD+ + ++ ++ K + R R+ G G T +IE +T
Sbjct: 125 ILGFQVEDALALVRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKT 184
Query: 197 YMLVQGQTVAALGPHKGL 214
+++ + +G + +
Sbjct: 185 RIVLADSKIHIMGSFQNI 202
>sp|Q5F414|PNO1_CHICK RNA-binding protein PNO1 OS=Gallus gallus GN=PNO1 PE=2 SV=1
Length = 242
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 75 RSVP-----YEPLKEEYLKECWPLVKN-ALELHFIKAELDVIEGSMTVFTTRKTWDPYII 128
R VP Y PLKE ++K P+V++ L++ F ++ ++ + T +T D +
Sbjct: 66 RKVPVPANRYTPLKENWMKIFTPIVEHLQLQIRF-----NLKTRNVEIKTCSETKDLSAL 120
Query: 129 IKARDMIKLLSRSVPYEQAVRVLQ-DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCT 186
KA D +K E A+ +++ DD+ + ++ ++ K + R R+ G G T
Sbjct: 121 TKAADFVKAFILGFQVEDALALIRLDDLFLESFEVTDVKPLKGDHLSRAIGRIAGKGGKT 180
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGL 214
+IE +T +++ + LG + +
Sbjct: 181 KFTIENVTRTRIVLADSKIHILGSFQNI 208
>sp|A7RP64|PNO1_NEMVE RNA-binding protein pno1 OS=Nematostella vectensis GN=pno1 PE=3
SV=1
Length = 238
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 41 ELDVIEGSMTVFTTRKTWDPYIIIKARDMI--KLLSRSVP-----YEPLKEEYLKECWPL 93
E+D +E R ++ P +KA+ + K +R +P Y PLKE ++K P+
Sbjct: 34 EMDTVESR-----ARPSFPP---VKAQKLAGGKSETRKIPVPSHRYTPLKENWMKIFTPV 85
Query: 94 VKN-ALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQ 152
V++ L++ F ++ + + +++T D + KA D ++ E A+ +++
Sbjct: 86 VEHLKLQIRF-----NLGSRHVEIRASKETSDIGAVQKAADFVQAFILGFEVEDALALIR 140
Query: 153 -DDISCDIIKIGNLVQNKQRFVKRR-QRLIGPNGCTLKSIELLTNCYMLVQGQTVAALGP 210
DD+ + +I ++ K + R R+ G G T +IE +T +++ + LG
Sbjct: 141 LDDLFLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGS 200
Query: 211 HKGL 214
+ +
Sbjct: 201 FQNI 204
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Query: 147 AVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQGQ 203
A R ++ DI D N V RL+GP G +LK +E T+C +L++G+
Sbjct: 164 AKRTIRVDIPVDNYPNFNFVG----------RLLGPRGNSLKRVEASTDCRVLIRGR 210
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 178 RLIGPNGCTLKSIELLTNCYMLVQGQ 203
RL+GP G +LK +E T+C +L++G+
Sbjct: 179 RLLGPRGNSLKRVEASTDCRVLIRGR 204
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 178 RLIGPNGCTLKSIELLTNCYMLVQGQ 203
R++GP G +LK +EL T+C + ++G+
Sbjct: 166 RILGPRGNSLKRVELATHCRVFIRGR 191
>sp|A4QJH4|YCF1_AETCO Putative membrane protein ycf1 OS=Aethionema cordifolium GN=ycf1-A
PE=3 SV=1
Length = 1774
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 8 KIPEFKKEDNPHEYLKECWPLVKNALE-------LHFIKA-----ELDVIEGSMTVFTTR 55
KIP F++E P + CW L+ + LH I+A ++ I T F
Sbjct: 418 KIPSFRREKTPSDKFSTCWSLINEEKKENLKKEFLHRIEALDKEWSVEHILEKTTRFCHN 477
Query: 56 KT--------WDPYIIIKARDMIKLLSRSVPYEPLKEEYLK 88
+T +DP++ +R I+ R VP++ + E Y+K
Sbjct: 478 ETRKEYLPKIYDPFLQGISRGRIQ---RLVPFQIITETYIK 515
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,710,500
Number of Sequences: 539616
Number of extensions: 4844169
Number of successful extensions: 13423
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 13320
Number of HSP's gapped (non-prelim): 96
length of query: 334
length of database: 191,569,459
effective HSP length: 118
effective length of query: 216
effective length of database: 127,894,771
effective search space: 27625270536
effective search space used: 27625270536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)