Your job contains 1 sequence.
>psy15011
MENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDP
YIIIKARDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTR
KTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLI
GPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQ
GQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWERFLPNF
KSKTLSKRKMPKKRKTKSEYTPFPPPQPESEANS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15011
(334 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020305 - symbol:dbe "dribble" species:7227 "Droso... 547 8.8e-61 2
UNIPROTKB|F1N9P9 - symbol:KRR1 "KRR1 small subunit proces... 515 3.3e-59 2
RGD|1306183 - symbol:Krr1 "KRR1, small subunit (SSU) proc... 534 2.3e-58 2
MGI|MGI:1289274 - symbol:Krr1 "KRR1, small subunit (SSU) ... 535 2.9e-58 2
UNIPROTKB|Q13601 - symbol:KRR1 "KRR1 small subunit proces... 530 7.8e-58 2
UNIPROTKB|Q3B7L9 - symbol:KRR1 "KRR1 small subunit proces... 530 7.8e-58 2
UNIPROTKB|F1SGD9 - symbol:KRR1 "KRR1 small subunit proces... 526 7.8e-58 2
ZFIN|ZDB-GENE-060623-10 - symbol:krr1 "KRR1, small subuni... 510 9.9e-58 2
UNIPROTKB|E2R869 - symbol:KRR1 "KRR1 small subunit proces... 526 2.6e-57 2
TAIR|locus:2150818 - symbol:AT5G08420 species:3702 "Arabi... 503 4.8e-52 2
DICTYBASE|DDB_G0280805 - symbol:DDB_G0280805 "ribosomal R... 482 4.8e-52 2
CGD|CAL0001053 - symbol:KRR1 species:5476 "Candida albica... 492 1.4e-50 2
POMBASE|SPBC25B2.05 - symbol:mis3 "rRNA processing protei... 457 2.3e-50 2
WB|WBGene00015461 - symbol:C05C8.2 species:6239 "Caenorha... 495 3.7e-50 2
SGD|S000000564 - symbol:KRR1 "Nucleolar protein required ... 477 3.3e-49 2
UNIPROTKB|G4N4Y1 - symbol:MGG_06049 "KRR1 small subunit p... 450 7.7e-48 2
ASPGD|ASPL0000001309 - symbol:AN5875 species:162425 "Emer... 464 1.8e-46 2
>FB|FBgn0020305 [details] [associations]
symbol:dbe "dribble" species:7227 "Drosophila melanogaster"
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
PROSITE:PS50084 SMART:SM00322 GO:GO:0007275 GO:GO:0005654
GO:GO:0005730 EMBL:AE014134 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 eggNOG:COG1094 GeneTree:ENSGT00390000018775 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:Z96931 EMBL:AY069529 RefSeq:NP_477240.1 UniGene:Dm.2087
ProteinModelPortal:Q9VPU8 SMR:Q9VPU8 IntAct:Q9VPU8
MINT:MINT-1588813 STRING:Q9VPU8 PRIDE:Q9VPU8
EnsemblMetazoa:FBtr0078030 GeneID:33269 KEGG:dme:Dmel_CG4258
UCSC:CG4258-RA CTD:33269 FlyBase:FBgn0020305 InParanoid:Q9VPU8
PhylomeDB:Q9VPU8 GenomeRNAi:33269 NextBio:782766 Bgee:Q9VPU8
Uniprot:Q9VPU8
Length = 345
Score = 547 (197.6 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 121/226 (53%), Positives = 153/226 (67%)
Query: 69 MIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYII 128
M++ S + + +E YLKE WPLV+ L H +KAELD++EGSM V T+RKTWDPYII
Sbjct: 36 MVEESSFATLFPKYRERYLKEVWPLVEQCLAEHHLKAELDLMEGSMVVKTSRKTWDPYII 95
Query: 129 IKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLK 188
IKARDMIKL++RSVP+EQA RVLQDDI CDIIKIGNLV K++FVKRRQRLIGPNG TLK
Sbjct: 96 IKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLK 155
Query: 189 SIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAALG 248
SIELLT+CY+LVQG TV+ALGP+KGL Q L E + N + + + AL
Sbjct: 156 SIELLTDCYVLVQGNTVSALGPYKGLQQVR----DIVL---ETMNNVHPIYN---IKALM 205
Query: 249 PHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNENWE 294
+ L++ R+ + P + K + KR K PK+K + E
Sbjct: 206 IKRELMKDPRLANEDWSRFLPKFKNKNIS-KR---KQPKVKKQKKE 247
Score = 389 (142.0 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 76/118 (64%), Positives = 86/118 (72%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGPNG TLKSIELLT+CY+LVQG TV+ALGP+KGL QVR IV +TM N+HPIYNIKA
Sbjct: 144 QRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGLQQVRDIVLETMNNVHPIYNIKA 203
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESEAN 333
LMIKREL KDP+L NE+W RFLP F EYTPFPP QPES+ +
Sbjct: 204 LMIKRELMKDPRLANEDWSRFLPKFKNKNISKRKQPKVKKQKKEYTPFPPSQPESKVD 261
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 67/183 (36%), Positives = 104/183 (56%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKE WPLV+ L H +KAELD++EGSM V T+RKTWDPY
Sbjct: 39 ESSFATLFPKYRER-----YLKEVWPLVEQCLAEHHLKAELDLMEGSMVVKTSRKTWDPY 93
Query: 62 IIIKARDMIKLLSRSVPYEPLKEEYLKE--CWPLVKNALELH----FIKAELDVI-EGSM 114
IIIKARDMIKL++RSVP+E K + C ++K +H F+K +I
Sbjct: 94 IIIKARDMIKLMARSVPFEQAKRVLQDDIGC-DIIKIGNLVHKKEKFVKRRQRLIGPNGA 152
Query: 115 TVFTTRKTWDPYIIIKARDMIKLLSRSVPYE--QAVRVLQDDISCDIIKIGNLVQNKQRF 172
T+ + D Y++++ + + L PY+ Q VR + + ++ I N+ K
Sbjct: 153 TLKSIELLTDCYVLVQG-NTVSALG---PYKGLQQVRDIVLETMNNVHPIYNI---KALM 205
Query: 173 VKR 175
+KR
Sbjct: 206 IKR 208
Score = 93 (37.8 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 1 MENAWSMKIPEFKKEDNPHEYLKE 24
++NAWSMKIP F++EDNPH ++E
Sbjct: 16 VDNAWSMKIPAFRQEDNPHGMVEE 39
>UNIPROTKB|F1N9P9 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component"
species:9031 "Gallus gallus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR004087 SMART:SM00322
GO:GO:0005730 GO:GO:0003723 GO:GO:0030529 GO:GO:0006364
GeneTree:ENSGT00390000018775 OMA:ALMIKRE InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 EMBL:AADN02009807
IPI:IPI00598123 Ensembl:ENSGALT00000016625 Uniprot:F1N9P9
Length = 375
Score = 515 (186.3 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 95/148 (64%), Positives = 124/148 (83%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H++ A LD+IEGSMTV TT+KT+DPY
Sbjct: 47 RGLLEESSFATLFPKYREAYLKECWPLVQKALSEHYVNATLDLIEGSMTVTTTKKTFDPY 106
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
II+ARD+IKLL+RSVP+EQAVR+LQDD++CDIIKIG+LV+N++ FVKRR RL+GP G T
Sbjct: 107 AIIRARDLIKLLARSVPFEQAVRILQDDVACDIIKIGSLVRNRESFVKRRGRLLGPKGST 166
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGL 214
LK++ELLTNCY++VQG TV+ALGP GL
Sbjct: 167 LKALELLTNCYIMVQGNTVSALGPFSGL 194
Score = 387 (141.3 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 71/113 (62%), Positives = 85/113 (75%)
Query: 219 IGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMI 278
+GP G TLK++ELLTNCY++VQG TV+ALGP GL +VR++V DTMKNIHPIYNIK LMI
Sbjct: 160 LGPKGSTLKALELLTNCYIMVQGNTVSALGPFSGLKEVRKVVLDTMKNIHPIYNIKTLMI 219
Query: 279 KRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
KREL+KDP+L+ +NWERFLP F EYTPFPPPQPES+
Sbjct: 220 KRELSKDPELRTQNWERFLPKFKRKNLKKRKEPKKKNIKKEYTPFPPPQPESQ 272
Score = 238 (88.8 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 45/79 (56%), Positives = 63/79 (79%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL H++ A LD+IEGSMTV TT+KT+DPY
Sbjct: 52 ESSFATLFPKYREA-----YLKECWPLVQKALSEHYVNATLDLIEGSMTVTTTKKTFDPY 106
Query: 62 IIIKARDMIKLLSRSVPYE 80
II+ARD+IKLL+RSVP+E
Sbjct: 107 AIIRARDLIKLLARSVPFE 125
Score = 47 (21.6 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKE 24
+ W K P F +EDNP L+E
Sbjct: 33 DGW--KEPAFTREDNPRGLLEE 52
>RGD|1306183 [details] [associations]
symbol:Krr1 "KRR1, small subunit (SSU) processome component,
homolog (yeast)" species:10116 "Rattus norvegicus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
SMART:SM00322 RGD:1306183 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 IPI:IPI00947723 Ensembl:ENSRNOT00000005384
UCSC:RGD:1306183 ArrayExpress:D3ZDQ8 Uniprot:D3ZDQ8
Length = 387
Score = 534 (193.0 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 112/226 (49%), Positives = 156/226 (69%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H +KA LD+IEGSMTV TT+KT+DPY
Sbjct: 51 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPY 110
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQA+R+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 111 IIIRARDLIKLLARSVSFEQAIRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 170
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP GL + T+K+I + N L+ + +A
Sbjct: 171 LKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLD-TMKNIHPIYNIKTLMIKRELAK 229
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNEN 292
+ R + + KN++ K +K+E P + E+
Sbjct: 230 DSELRSQSWERFLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPES 275
Score = 381 (139.2 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 71/118 (60%), Positives = 87/118 (73%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGP G TLK++ELLTNCY++VQG TV+A+GP GL +VR++V DTMKNIHPIYNIK
Sbjct: 161 QRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYNIKT 220
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESEAN 333
LMIKRELAKD +L++++WERFLP F EYTPFPPPQPES+ +
Sbjct: 221 LMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPESQVD 278
Score = 236 (88.1 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 46/79 (58%), Positives = 63/79 (79%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL H +KA LD+IEGSMTV TT+KT+DPY
Sbjct: 56 ESSFATLFPKYREA-----YLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPY 110
Query: 62 IIIKARDMIKLLSRSVPYE 80
III+ARD+IKLL+RSV +E
Sbjct: 111 IIIRARDLIKLLARSVSFE 129
Score = 51 (23.0 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKE 24
+ W K P F KEDNP L+E
Sbjct: 37 DGW--KEPAFSKEDNPRGLLEE 56
>MGI|MGI:1289274 [details] [associations]
symbol:Krr1 "KRR1, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:1289274 GO:GO:0005730
GO:GO:0003723 GO:GO:0030529 EMBL:CH466539 GO:GO:0006364 CTD:11103
eggNOG:COG1094 GeneTree:ENSGT00390000018775 HOGENOM:HOG000116208
HOVERGEN:HBG051924 KO:K06961 OMA:ALMIKRE OrthoDB:EOG4FR0S6
InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:AK030560 EMBL:AK032472 EMBL:AK041854 EMBL:AK146926
EMBL:AK168675 EMBL:AC167231 EMBL:BC089510 EMBL:BC094236
IPI:IPI00223570 IPI:IPI00652012 RefSeq:NP_848725.2 UniGene:Mm.34606
ProteinModelPortal:Q8BGA5 SMR:Q8BGA5 STRING:Q8BGA5
PhosphoSite:Q8BGA5 PaxDb:Q8BGA5 PRIDE:Q8BGA5
Ensembl:ENSMUST00000163048 GeneID:52705 KEGG:mmu:52705
InParanoid:Q3UIG9 NextBio:309373 Bgee:Q8BGA5 Genevestigator:Q8BGA5
GermOnline:ENSMUSG00000063334 Uniprot:Q8BGA5
Length = 380
Score = 535 (193.4 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 113/226 (50%), Positives = 156/226 (69%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H +KA LD+IEGSMTV TT+KT+DPY
Sbjct: 51 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPY 110
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQAVR+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 111 IIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 170
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP GL + T+K+I + N L+ + +A
Sbjct: 171 LKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLD-TMKNIHPIYNIKTLMIKRELAK 229
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNEN 292
+ R + + KN++ K +K+E P + E+
Sbjct: 230 DSELRSQSWERFLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPES 275
Score = 380 (138.8 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 71/116 (61%), Positives = 86/116 (74%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGP G TLK++ELLTNCY++VQG TV+A+GP GL +VR++V DTMKNIHPIYNIK
Sbjct: 161 QRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYNIKT 220
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
LMIKRELAKD +L++++WERFLP F EYTPFPPPQPES+
Sbjct: 221 LMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPESQ 276
Score = 236 (88.1 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 46/79 (58%), Positives = 63/79 (79%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL H +KA LD+IEGSMTV TT+KT+DPY
Sbjct: 56 ESSFATLFPKYREA-----YLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPY 110
Query: 62 IIIKARDMIKLLSRSVPYE 80
III+ARD+IKLL+RSV +E
Sbjct: 111 IIIRARDLIKLLARSVSFE 129
Score = 51 (23.0 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKE 24
+ W K P F KEDNP L+E
Sbjct: 37 DGW--KEPAFSKEDNPRGLLEE 56
>UNIPROTKB|Q13601 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component
homolog" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005737 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 EMBL:AC121761 CTD:11103 eggNOG:COG1094
HOGENOM:HOG000116208 HOVERGEN:HBG051924 KO:K06961 OMA:ALMIKRE
OrthoDB:EOG4FR0S6 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:EF010919 EMBL:AK313687 EMBL:AC022507
EMBL:BC005225 EMBL:BC016778 EMBL:BC026107 EMBL:BC033887 EMBL:U55766
IPI:IPI00156032 IPI:IPI00942884 PIR:G02629 RefSeq:NP_008974.5
UniGene:Hs.645517 ProteinModelPortal:Q13601 SMR:Q13601
IntAct:Q13601 MINT:MINT-1464394 STRING:Q13601 PhosphoSite:Q13601
DMDM:50400303 SWISS-2DPAGE:Q13601 PaxDb:Q13601 PRIDE:Q13601
DNASU:11103 Ensembl:ENST00000229214 Ensembl:ENST00000438169
GeneID:11103 KEGG:hsa:11103 UCSC:uc001sxt.3 GeneCards:GC12M075891
H-InvDB:HIX0010835 HGNC:HGNC:5176 HPA:HPA043433 MIM:612817
neXtProt:NX_Q13601 PharmGKB:PA29450 InParanoid:Q13601
PhylomeDB:Q13601 GenomeRNAi:11103 NextBio:42216 PMAP-CutDB:Q13601
ArrayExpress:Q13601 Bgee:Q13601 CleanEx:HS_KRR1
Genevestigator:Q13601 GermOnline:ENSG00000111615 Uniprot:Q13601
Length = 381
Score = 530 (191.6 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 112/226 (49%), Positives = 155/226 (68%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H + A LD+IEGSMTV TT+KT+DPY
Sbjct: 52 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPY 111
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQAVR+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 112 IIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 171
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP GL + T+K+I + N L+ + +A
Sbjct: 172 LKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLD-TMKNIHPIYNIKSLMIKRELAK 230
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNEN 292
+ R + + KN++ K +K+E P + E+
Sbjct: 231 DSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPES 276
Score = 381 (139.2 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 71/116 (61%), Positives = 87/116 (75%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGP G TLK++ELLTNCY++VQG TV+A+GP GL +VR++V DTMKNIHPIYNIK+
Sbjct: 162 QRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYNIKS 221
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
LMIKRELAKD +L++++WERFLP F EYTPFPPPQPES+
Sbjct: 222 LMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQ 277
Score = 231 (86.4 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 45/79 (56%), Positives = 62/79 (78%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL H + A LD+IEGSMTV TT+KT+DPY
Sbjct: 57 ESSFATLFPKYREA-----YLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPY 111
Query: 62 IIIKARDMIKLLSRSVPYE 80
III+ARD+IKLL+RSV +E
Sbjct: 112 IIIRARDLIKLLARSVSFE 130
Score = 51 (23.0 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKE 24
+ W K P F KEDNP L+E
Sbjct: 38 DGW--KEPAFSKEDNPRGLLEE 57
>UNIPROTKB|Q3B7L9 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005730
GO:GO:0003723 GO:GO:0030529 GO:GO:0006364 EMBL:DAAA02012357
EMBL:BC107550 IPI:IPI00703671 RefSeq:NP_001032908.1
UniGene:Bt.56273 STRING:Q3B7L9 Ensembl:ENSBTAT00000015401
GeneID:513714 KEGG:bta:513714 CTD:11103 eggNOG:COG1094
GeneTree:ENSGT00390000018775 HOGENOM:HOG000116208
HOVERGEN:HBG051924 InParanoid:Q3B7L9 KO:K06961 OMA:ALMIKRE
OrthoDB:EOG4FR0S6 NextBio:20870998 InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 Uniprot:Q3B7L9
Length = 382
Score = 530 (191.6 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 112/226 (49%), Positives = 155/226 (68%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H I A LD+IEGSMTV TT+KT+DPY
Sbjct: 52 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHINATLDLIEGSMTVCTTKKTFDPY 111
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQA+R+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 112 IIIRARDLIKLLARSVSFEQAIRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 171
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP GL + T+K+I + N L+ + +A
Sbjct: 172 LKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLD-TMKNIHPIYNIKTLMIKRELAK 230
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNEN 292
+ R + + KN++ K +K+E P + E+
Sbjct: 231 DSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPES 276
Score = 380 (138.8 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 71/116 (61%), Positives = 86/116 (74%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGP G TLK++ELLTNCY++VQG TV+A+GP GL +VR++V DTMKNIHPIYNIK
Sbjct: 162 QRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYNIKT 221
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
LMIKRELAKD +L++++WERFLP F EYTPFPPPQPES+
Sbjct: 222 LMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQ 277
Score = 232 (86.7 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 46/79 (58%), Positives = 62/79 (78%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL H I A LD+IEGSMTV TT+KT+DPY
Sbjct: 57 ESSFATLFPKYREA-----YLKECWPLVQKALNEHHINATLDLIEGSMTVCTTKKTFDPY 111
Query: 62 IIIKARDMIKLLSRSVPYE 80
III+ARD+IKLL+RSV +E
Sbjct: 112 IIIRARDLIKLLARSVSFE 130
Score = 51 (23.0 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKE 24
+ W K P F KEDNP L+E
Sbjct: 38 DGW--KEPAFSKEDNPRGLLEE 57
>UNIPROTKB|F1SGD9 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component"
species:9823 "Sus scrofa" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
SMART:SM00322 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 CTD:11103 GeneTree:ENSGT00390000018775 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:CU694568 RefSeq:XP_003126436.1 UniGene:Ssc.51480
Ensembl:ENSSSCT00000000562 GeneID:100523737 KEGG:ssc:100523737
Uniprot:F1SGD9
Length = 375
Score = 526 (190.2 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 112/226 (49%), Positives = 154/226 (68%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H + A LD+IEGSMTV TT+KT+DPY
Sbjct: 46 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPY 105
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQAVR+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 106 IIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 165
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+A+GP GL + T+K+I + N L+ + +A
Sbjct: 166 LKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLD-TMKNIHPIYNIKTLMIKRELAK 224
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNEN 292
+ R + + KN++ K K+E P + E+
Sbjct: 225 DSELRSQSWERFLPQFKHKNVNKRKEPKKKTTKKEYTPFPPPQPES 270
Score = 381 (139.2 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 71/116 (61%), Positives = 86/116 (74%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGP G TLK++ELLTNCY++VQG TV+A+GP GL +VR++V DTMKNIHPIYNIK
Sbjct: 156 QRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYNIKT 215
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
LMIKRELAKD +L++++WERFLP F EYTPFPPPQPES+
Sbjct: 216 LMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTTKKEYTPFPPPQPESQ 271
Score = 231 (86.4 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 45/79 (56%), Positives = 62/79 (78%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL H + A LD+IEGSMTV TT+KT+DPY
Sbjct: 51 ESSFATLFPKYREA-----YLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPY 105
Query: 62 IIIKARDMIKLLSRSVPYE 80
III+ARD+IKLL+RSV +E
Sbjct: 106 IIIRARDLIKLLARSVSFE 124
Score = 51 (23.0 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKE 24
+ W K P F KEDNP L+E
Sbjct: 32 DGW--KEPAFSKEDNPRGLLEE 51
>ZFIN|ZDB-GENE-060623-10 [details] [associations]
symbol:krr1 "KRR1, small subunit (SSU) processome
component, homolog (yeast)" species:7955 "Danio rerio" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR004087 SMART:SM00322 ZFIN:ZDB-GENE-060623-10
GO:GO:0005730 GO:GO:0003723 GO:GO:0030529 GO:GO:0006364
GeneTree:ENSGT00390000018775 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:CU694453 IPI:IPI00772719
Ensembl:ENSDART00000125815 Bgee:F1R1V6 Uniprot:F1R1V6
Length = 398
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 103/167 (61%), Positives = 126/167 (75%)
Query: 51 VFTTRKTWDPYIIIKARDMIKLLSRS---VPYEPLKEEYLKECWPLVKNALELHFIKAEL 107
+ T W KA + LL S + +E YLKECWPLV+ AL FI A L
Sbjct: 50 LLTVPDDWKEPKFTKADNPKGLLEESSFATLFPKYREAYLKECWPLVQKALAELFINATL 109
Query: 108 DVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQ 167
D+IEGSMTV TT+KT+DPY II+ARD+IKLL+RSVP+EQAVR+L DD++CDIIKIG LV+
Sbjct: 110 DLIEGSMTVNTTKKTFDPYSIIRARDLIKLLARSVPFEQAVRILDDDMACDIIKIGTLVR 169
Query: 168 NKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGL 214
N++RFVKRRQRLIGP G TLK++ELLTNCY++VQG TV+ALGP GL
Sbjct: 170 NRERFVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSALGPFNGL 216
Score = 383 (139.9 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 72/116 (62%), Positives = 85/116 (73%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGP G TLK++ELLTNCY++VQG TV+ALGP GL +VR++V DTMKNIHPIYNIK
Sbjct: 179 QRLIGPKGSTLKALELLTNCYVMVQGNTVSALGPFNGLKEVRKVVLDTMKNIHPIYNIKT 238
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
LMIKRELA DP+L+ ++W RFLPNF EYTPFPPPQPES+
Sbjct: 239 LMIKRELANDPELRTQSWGRFLPNFRHKSLSKRKQPKKKRVKKEYTPFPPPQPESK 294
Score = 228 (85.3 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 46/79 (58%), Positives = 62/79 (78%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL FI A LD+IEGSMTV TT+KT+DPY
Sbjct: 74 ESSFATLFPKYREA-----YLKECWPLVQKALAELFINATLDLIEGSMTVNTTKKTFDPY 128
Query: 62 IIIKARDMIKLLSRSVPYE 80
II+ARD+IKLL+RSVP+E
Sbjct: 129 SIIRARDLIKLLARSVPFE 147
Score = 44 (20.5 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 8 KIPEFKKEDNPHEYLKE 24
K P+F K DNP L+E
Sbjct: 58 KEPKFTKADNPKGLLEE 74
>UNIPROTKB|E2R869 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component"
species:9615 "Canis lupus familiaris" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 SMART:SM00322 GO:GO:0005730 GO:GO:0003723
GO:GO:0030529 GO:GO:0006364 CTD:11103 GeneTree:ENSGT00390000018775
KO:K06961 OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:AAEX03009859 RefSeq:XP_851876.1
ProteinModelPortal:E2R869 Ensembl:ENSCAFT00000009137 GeneID:475405
KEGG:cfa:475405 Uniprot:E2R869
Length = 380
Score = 526 (190.2 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 111/226 (49%), Positives = 154/226 (68%)
Query: 67 RDMIKLLSRSVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 126
R +++ S + + +E YLKECWPLV+ AL H + A LD+IEGSMTV TT+KT+DPY
Sbjct: 52 RGLLEESSFATLFPKYREAYLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPY 111
Query: 127 IIIKARDMIKLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCT 186
III+ARD+IKLL+RSV +EQAVR+LQDD++CDIIKIG+LV+NK+RFVKRRQRLIGP G T
Sbjct: 112 IIIRARDLIKLLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGST 171
Query: 187 LKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGCTLKSIELLTNCYMLVQGQTVAA 246
LK++ELLTNCY++VQG TV+ +GP GL + T+K+I + N L+ + +A
Sbjct: 172 LKALELLTNCYIMVQGNTVSVIGPFSGLKEVRKVVLD-TMKNIHPIYNIKTLMIKRELAK 230
Query: 247 LGPHKGLLQVRRIVEDTMKNIHPIYNIKALMIKRELAKDPKLKNEN 292
+ R + + KN++ K +K+E P + E+
Sbjct: 231 DSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPES 276
Score = 376 (137.4 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 70/116 (60%), Positives = 85/116 (73%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IGP G TLK++ELLTNCY++VQG TV+ +GP GL +VR++V DTMKNIHPIYNIK
Sbjct: 162 QRLIGPKGSTLKALELLTNCYIMVQGNTVSVIGPFSGLKEVRKVVLDTMKNIHPIYNIKT 221
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
LMIKRELAKD +L++++WERFLP F EYTPFPPPQPES+
Sbjct: 222 LMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKEPKKKTVKKEYTPFPPPQPESQ 277
Score = 231 (86.4 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 45/79 (56%), Positives = 62/79 (78%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKECWPLV+ AL H + A LD+IEGSMTV TT+KT+DPY
Sbjct: 57 ESSFATLFPKYREA-----YLKECWPLVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPY 111
Query: 62 IIIKARDMIKLLSRSVPYE 80
III+ARD+IKLL+RSV +E
Sbjct: 112 IIIRARDLIKLLARSVSFE 130
Score = 51 (23.0 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKE 24
+ W K P F KEDNP L+E
Sbjct: 38 DGW--KEPAFSKEDNPRGLLEE 57
>TAIR|locus:2150818 [details] [associations]
symbol:AT5G08420 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 SMART:SM00322 EMBL:CP002688 GO:GO:0005730
GO:GO:0003723 GO:GO:0030529 GO:GO:0006364 EMBL:AL392174 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:AF370282 EMBL:AY142563 IPI:IPI00545754 RefSeq:NP_196459.1
UniGene:At.10143 ProteinModelPortal:Q9FT93 STRING:Q9FT93
PRIDE:Q9FT93 EnsemblPlants:AT5G08420.1 GeneID:830741
KEGG:ath:AT5G08420 TAIR:At5g08420 InParanoid:Q9FT93
PhylomeDB:Q9FT93 ProtClustDB:CLSN2687289 ArrayExpress:Q9FT93
Genevestigator:Q9FT93 Uniprot:Q9FT93
Length = 391
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 92/141 (65%), Positives = 121/141 (85%)
Query: 76 SVPYEPLKEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMI 135
S + +E+YL+ECWP V++AL+ + + +L+++EGSMTV TTRKT DPYII+KARD+I
Sbjct: 60 STLFPQYREKYLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLI 119
Query: 136 KLLSRSVPYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTN 195
KLLSRSVP QA+++L+D++ CDIIKIGNLV+NK+RFVKRRQRL+GPN TLK++E+LTN
Sbjct: 120 KLLSRSVPAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTN 179
Query: 196 CYMLVQGQTVAALGPHKGLLQ 216
CY+LVQG TVAA+GP KGL Q
Sbjct: 180 CYILVQGSTVAAMGPFKGLKQ 200
Score = 347 (127.2 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 75/168 (44%), Positives = 100/168 (59%)
Query: 165 LVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQSNIGPNGC 224
++ + +K R + P +K +E C ++ G V Q +GPN
Sbjct: 111 IIVKARDLIKLLSRSV-PAPQAIKILEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSS 169
Query: 225 TLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNI-HPIYNIKALMIKRELA 283
TLK++E+LTNCY+LVQG TVAA+GP KGL Q+RRIVED ++NI HP+Y+IK LM+K+EL
Sbjct: 170 TLKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELE 229
Query: 284 KDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
KDP L NE+W+RFLP F YTPFPPPQP S+
Sbjct: 230 KDPALANESWDRFLPTFRKKNVKQKKPKSKEKK--PYTPFPPPQPPSK 275
Score = 210 (79.0 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 41/76 (53%), Positives = 60/76 (78%)
Query: 3 NAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYI 62
+ +S P+++++ YL+ECWP V++AL+ + + +L+++EGSMTV TTRKT DPYI
Sbjct: 57 STFSTLFPQYREK-----YLQECWPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYI 111
Query: 63 IIKARDMIKLLSRSVP 78
I+KARD+IKLLSRSVP
Sbjct: 112 IVKARDLIKLLSRSVP 127
>DICTYBASE|DDB_G0280805 [details] [associations]
symbol:DDB_G0280805 "ribosomal RNA assembly protein"
species:44689 "Dictyostelium discoideum" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR004087
PROSITE:PS50084 SMART:SM00322 dictyBase:DDB_G0280805 GO:GO:0005730
GenomeReviews:CM000152_GR GO:GO:0003723 GO:GO:0030529 GO:GO:0006364
eggNOG:COG1094 KO:K06961 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:AAFI02000038 RefSeq:XP_641041.1
ProteinModelPortal:Q54UU6 STRING:Q54UU6 EnsemblProtists:DDB0204743
GeneID:8622743 KEGG:ddi:DDB_G0280805 OMA:PSYLESY
ProtClustDB:CLSZ2428997 Uniprot:Q54UU6
Length = 374
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 94/152 (61%), Positives = 119/152 (78%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E+YL+E W LV+N L H I+ +LD+IEGSMTV TT+K WDP I+KARD+IKLLSRSV
Sbjct: 68 REKYLQEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSV 127
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+E A +VL DD +CDIIKIG V+NK+RFVKRRQRL+GP+G TLK+IELLT CY+LVQG
Sbjct: 128 PFEHAQKVLNDDYNCDIIKIGGFVRNKERFVKRRQRLVGPDGSTLKAIELLTKCYVLVQG 187
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTN 234
TV+++GP GL+Q C LK+I + N
Sbjct: 188 NTVSSIGPWNGLVQVRKIVEDC-LKNIHPIYN 218
Score = 346 (126.9 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 68/117 (58%), Positives = 80/117 (68%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q +GP+G TLK+IELLT CY+LVQG TV+++GP GL+QVR+IVED +KNIHPIYNIK
Sbjct: 162 QRLVGPDGSTLKAIELLTKCYVLVQGNTVSSIGPWNGLVQVRKIVEDCLKNIHPIYNIKE 221
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQ-PESE 331
LMIKREL KD LKNENWER+LP F + PF PPQ P E
Sbjct: 222 LMIKRELEKDETLKNENWERYLPQFKKTNQNKKKKVQKKKKDRDAAPFAPPQLPRKE 278
Score = 211 (79.3 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 20 EYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVPY 79
+YL+E W LV+N L H I+ +LD+IEGSMTV TT+K WDP I+KARD+IKLLSRSVP+
Sbjct: 70 KYLQEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSVPF 129
Query: 80 E 80
E
Sbjct: 130 E 130
>CGD|CAL0001053 [details] [associations]
symbol:KRR1 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR004087 SMART:SM00322
CGD:CAL0001053 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 EMBL:AACQ01000117 EMBL:AACQ01000116 eggNOG:COG1094
HOGENOM:HOG000116208 KO:K06961 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 RefSeq:XP_713795.1 RefSeq:XP_713834.1
ProteinModelPortal:Q59W63 STRING:Q59W63 GeneID:3644522
GeneID:3644542 KEGG:cal:CaO19.661 KEGG:cal:CaO19.8277
Uniprot:Q59W63
Length = 358
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 94/147 (63%), Positives = 119/147 (80%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E+YL+ W V AL+ HFIK ELD++EGSMTV TT KT+DP +IIKARD+IKLL+RSV
Sbjct: 49 REQYLRSIWSDVTKALDKHFIKCELDLVEGSMTVKTTTKTFDPAMIIKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDDI+CD+IKIGN V NK RF+KRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDIACDVIKIGNFVANKDRFIKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSI 229
TV+A+GP KGL + C +K+I
Sbjct: 169 NTVSAMGPFKGLKEVRRVVEDC-MKNI 194
Score = 340 (124.7 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 66/113 (58%), Positives = 80/113 (70%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q +GPNG TLK++ELLT CY+LVQG TV+A+GP KGL +VRR+VED MKNIHPIY IK
Sbjct: 143 QRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKNIHPIYYIKE 202
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXE-YTPFPPPQ 327
LMIK+EL+K+P L NE+W RFLP+F + YTPFPP Q
Sbjct: 203 LMIKQELSKNPALANEDWSRFLPSFKKRNVARKKKTSKKSVEKKVYTPFPPAQ 255
Score = 203 (76.5 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E+++ P+++++ YL+ W V AL+ HFIK ELD++EGSMTV TT KT+DP
Sbjct: 38 ESSFMTLFPKYREQ-----YLRSIWSDVTKALDKHFIKCELDLVEGSMTVKTTTKTFDPA 92
Query: 62 IIIKARDMIKLLSRSVPY 79
+IIKARD+IKLL+RSVP+
Sbjct: 93 MIIKARDLIKLLARSVPF 110
>POMBASE|SPBC25B2.05 [details] [associations]
symbol:mis3 "rRNA processing protein Mis3" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322
PomBase:SPBC25B2.05 GO:GO:0007346 GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006364 GO:GO:0032040
eggNOG:COG1094 HOGENOM:HOG000116208 KO:K06961 OMA:ALMIKRE
InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:AB030208 PIR:T39981 RefSeq:NP_596073.1
ProteinModelPortal:O74777 STRING:O74777 EnsemblFungi:SPBC25B2.05.1
GeneID:2540544 KEGG:spo:SPBC25B2.05 OrthoDB:EOG40S3QM
NextBio:20801670 Uniprot:O74777
Length = 327
Score = 457 (165.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 86/132 (65%), Positives = 111/132 (84%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E+YL+E WP V AL+ I LD++EGSMTV TTRKT+DPY I+ ARD+IKLL+RSV
Sbjct: 62 REKYLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSV 121
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV+++QD ++CDIIKIGN+++NK+RFVKRRQRLIG NG TLK++ELLT CY+LVQG
Sbjct: 122 PFPQAVKIMQDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQG 181
Query: 203 QTVAALGPHKGL 214
TVA +G +KGL
Sbjct: 182 TTVAVMGGYKGL 193
Score = 350 (128.3 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 71/116 (61%), Positives = 81/116 (69%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q IG NG TLK++ELLT CY+LVQG TVA +G +KGL +VRRIVED M NIHPIY+IK
Sbjct: 156 QRLIGTNGQTLKALELLTQCYILVQGTTVAVMGGYKGLKEVRRIVEDCMHNIHPIYHIKE 215
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXEYTPFPPPQPESE 331
LMIKRELAKDP L NE+W+RFLP F EYTPFPP QP S+
Sbjct: 216 LMIKRELAKDPTLANESWDRFLPQFKKRNVARRKPAKIRETK-EYTPFPPAQPPSK 270
Score = 191 (72.3 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P+++++ YL+E WP V AL+ I LD++EGSMTV TTRKT+DPY
Sbjct: 51 ESSFATLFPKYREK-----YLREVWPHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPY 105
Query: 62 IIIKARDMIKLLSRSVPY 79
I+ ARD+IKLL+RSVP+
Sbjct: 106 SILDARDLIKLLARSVPF 123
Score = 38 (18.4 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 8 KIPEFKKEDNPHEYLKE 24
KI F K+D+ +L+E
Sbjct: 35 KIEPFTKDDSKESFLEE 51
>WB|WBGene00015461 [details] [associations]
symbol:C05C8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR004087 SMART:SM00322 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0005730 GO:GO:0002119 GO:GO:0010171
GO:GO:0003723 GO:GO:0030529 GO:GO:0006364 eggNOG:COG1094
GeneTree:ENSGT00390000018775 HOGENOM:HOG000116208 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:FO080353 PIR:T31743 RefSeq:NP_504837.1
ProteinModelPortal:O16311 SMR:O16311 IntAct:O16311 STRING:O16311
PaxDb:O16311 EnsemblMetazoa:C05C8.2.1 EnsemblMetazoa:C05C8.2.2
GeneID:179115 KEGG:cel:CELE_C05C8.2 UCSC:C05C8.2 CTD:179115
WormBase:C05C8.2 InParanoid:O16311 NextBio:903988 Uniprot:O16311
Length = 370
Score = 495 (179.3 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 95/152 (62%), Positives = 124/152 (81%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E+Y+KE WPL++ AL HF+KA+LD++EG+M V TTRKTWDPYII+KAR++IKLLSRSV
Sbjct: 73 REKYIKESWPLIEKALGEHFLKADLDLLEGTMCVRTTRKTWDPYIIMKAREVIKLLSRSV 132
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
PYEQA+RVL+D+I C+IIKI ++V+NK+RFVKRR RLIG +G TLK++ELLT CY+ VQG
Sbjct: 133 PYEQAIRVLEDEIYCEIIKISSMVRNKERFVKRRARLIGNDGATLKALELLTQCYVCVQG 192
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSIELLTN 234
TV A+GP GL Q N C +K+I + N
Sbjct: 193 GTVCAVGPLAGLKQINQIVTDC-MKNIHPIYN 223
Score = 287 (106.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 57/114 (50%), Positives = 73/114 (64%)
Query: 219 IGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKALMI 278
IG +G TLK++ELLT CY+ VQG TV A+GP GL Q+ +IV D MKNIHPIYNIK +MI
Sbjct: 170 IGNDGATLKALELLTQCYVCVQGGTVCAVGPLAGLKQINQIVTDCMKNIHPIYNIKTMMI 229
Query: 279 KRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXX-------EYTPFPP 325
KREL+K+ +LK+ NW+ +LPN+ E+TPFPP
Sbjct: 230 KRELSKNDELKDANWDAYLPNYRKKVQSATTTKEAKKKKAYKMKPKKEFTPFPP 283
Score = 246 (91.7 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 46/79 (58%), Positives = 65/79 (82%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E+++S P+++++ Y+KE WPL++ AL HF+KA+LD++EG+M V TTRKTWDPY
Sbjct: 62 ESSFSSLFPKYREK-----YIKESWPLIEKALGEHFLKADLDLLEGTMCVRTTRKTWDPY 116
Query: 62 IIIKARDMIKLLSRSVPYE 80
II+KAR++IKLLSRSVPYE
Sbjct: 117 IIMKAREVIKLLSRSVPYE 135
Score = 44 (20.5 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 9 IPEFKKEDNPHEYLKE 24
I F KEDNP+ L+E
Sbjct: 47 INTFSKEDNPNGLLQE 62
>SGD|S000000564 [details] [associations]
symbol:KRR1 "Nucleolar protein required for rRNA synthesis
and ribosomal assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042274 "ribosomal
small subunit biogenesis" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 SGD:S000000564 GO:GO:0005730 EMBL:X59720
EMBL:BK006937 GO:GO:0003723 GO:GO:0030686 GO:GO:0032040
GO:GO:0000447 eggNOG:COG1094 GeneTree:ENSGT00390000018775
HOGENOM:HOG000116208 KO:K06961 OMA:ALMIKRE InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 OrthoDB:EOG40S3QM EMBL:AY692923
PIR:S19389 RefSeq:NP_009872.1 ProteinModelPortal:P25586
DIP:DIP-1408N IntAct:P25586 MINT:MINT-397054 STRING:P25586
PaxDb:P25586 PeptideAtlas:P25586 EnsemblFungi:YCL059C GeneID:850298
KEGG:sce:YCL059C CYGD:YCL059c NextBio:965673 Genevestigator:P25586
GermOnline:YCL059C Uniprot:P25586
Length = 316
Score = 477 (173.0 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 93/147 (63%), Positives = 117/147 (79%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLK W V AL+ H I LD++EGSMTV TTRKT+DP II+KARD+IKLL+RSV
Sbjct: 49 RESYLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSV 108
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P+ QAV++LQDD++CD+IKIGN V NK+RFVKRRQRL+GPNG TLK++ELLT CY+LVQG
Sbjct: 109 PFPQAVKILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQG 168
Query: 203 QTVAALGPHKGLLQSNIGPNGCTLKSI 229
TV+A+GP KGL + C +K+I
Sbjct: 169 NTVSAMGPFKGLKEVRRVVEDC-MKNI 194
Score = 342 (125.4 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 68/113 (60%), Positives = 80/113 (70%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q +GPNG TLK++ELLT CY+LVQG TV+A+GP KGL +VRR+VED MKNIHPIY+IK
Sbjct: 143 QRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKNIHPIYHIKE 202
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXE-YTPFPPPQ 327
LMIKRELAK P+L NE+W RFLP F + YTPFPP Q
Sbjct: 203 LMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNVEKKVYTPFPPAQ 255
Score = 188 (71.2 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E+++ P++++ YLK W V AL+ H I LD++EGSMTV TTRKT+DP
Sbjct: 38 ESSFMTLFPKYRES-----YLKTIWNDVTRALDKHNIACVLDLVEGSMTVKTTRKTYDPA 92
Query: 62 IIIKARDMIKLLSRSVPY 79
II+KARD+IKLL+RSVP+
Sbjct: 93 IILKARDLIKLLARSVPF 110
Score = 42 (19.8 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 8 KIPEFKKEDN 17
KI EFK+EDN
Sbjct: 20 KIEEFKEEDN 29
>UNIPROTKB|G4N4Y1 [details] [associations]
symbol:MGG_06049 "KRR1 small subunit processome component"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004087 SMART:SM00322
GO:GO:0005730 EMBL:CM001233 GO:GO:0003723 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 KO:K06961 InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 RefSeq:XP_003711900.1
ProteinModelPortal:G4N4Y1 EnsemblFungi:MGG_06049T0 GeneID:2683926
KEGG:mgr:MGG_06049 Uniprot:G4N4Y1
Length = 320
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 83/132 (62%), Positives = 111/132 (84%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YL++ WPLV ALE + I LD++EGSMTV TTRKT+DP I+ ARD+IKLL+RSV
Sbjct: 48 REVYLRQSWPLVTKALEKYGIATTLDLVEGSMTVKTTRKTFDPAAILNARDLIKLLARSV 107
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P QA+++L+D ++CDIIKI NLV+NK+RF+KRRQR++GPNG TLK++ELLT+ Y+LV G
Sbjct: 108 PAPQAIKILEDGVACDIIKIRNLVRNKERFIKRRQRILGPNGSTLKALELLTSTYILVHG 167
Query: 203 QTVAALGPHKGL 214
TV+A+GP+KGL
Sbjct: 168 NTVSAMGPYKGL 179
Score = 329 (120.9 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 64/120 (53%), Positives = 82/120 (68%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q +GPNG TLK++ELLT+ Y+LV G TV+A+GP+KGL +VRR+VED M N+HPIY IK
Sbjct: 142 QRILGPNGSTLKALELLTSTYILVHGNTVSAMGPYKGLKEVRRVVEDCMNNVHPIYLIKE 201
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXE--YTPFPPPQPESEAN 333
LM+KRELAKDP L NE+W+RFLPNF + YT FPP +S+ +
Sbjct: 202 LMVKRELAKDPALANESWDRFLPNFKKRSLSHRRVPHKVNDKSKKTYTAFPPAPEKSKVD 261
Score = 188 (71.2 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 21 YLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSVP 78
YL++ WPLV ALE + I LD++EGSMTV TTRKT+DP I+ ARD+IKLL+RSVP
Sbjct: 51 YLRQSWPLVTKALEKYGIATTLDLVEGSMTVKTTRKTFDPAAILNARDLIKLLARSVP 108
>ASPGD|ASPL0000001309 [details] [associations]
symbol:AN5875 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR004087 SMART:SM00322 GO:GO:0005730
GO:GO:0003723 EMBL:BN001301 GO:GO:0030686 GO:GO:0032040
GO:GO:0000447 HOGENOM:HOG000116208 OMA:ALMIKRE InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 EnsemblFungi:CADANIAT00007161
Uniprot:C8UZX9
Length = 358
Score = 464 (168.4 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 87/132 (65%), Positives = 111/132 (84%)
Query: 83 KEEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPYIIIKARDMIKLLSRSV 142
+E YLKE WP+V ALE H I LD++EGSMTV TTRKT+DP I+KARD+IKLLSRSV
Sbjct: 48 REVYLKEAWPVVTRALEKHGIACTLDLVEGSMTVKTTRKTYDPAAILKARDLIKLLSRSV 107
Query: 143 PYEQAVRVLQDDISCDIIKIGNLVQNKQRFVKRRQRLIGPNGCTLKSIELLTNCYMLVQG 202
P +QA+++L+D ++CDIIKI N V+NK+RFVKRRQR++GP G TLK++ELLT Y+LVQG
Sbjct: 108 PVQQALKILEDGVACDIIKIRNQVRNKERFVKRRQRILGPQGSTLKALELLTGTYILVQG 167
Query: 203 QTVAALGPHKGL 214
TV+A+GP+KGL
Sbjct: 168 NTVSAMGPYKGL 179
Score = 335 (123.0 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 66/120 (55%), Positives = 83/120 (69%)
Query: 216 QSNIGPNGCTLKSIELLTNCYMLVQGQTVAALGPHKGLLQVRRIVEDTMKNIHPIYNIKA 275
Q +GP G TLK++ELLT Y+LVQG TV+A+GP+KGL +VRRIV+D M NIHPIY+IK
Sbjct: 142 QRILGPQGSTLKALELLTGTYILVQGNTVSAMGPYKGLKEVRRIVDDCMANIHPIYHIKE 201
Query: 276 LMIKRELAKDPKLKNENWERFLPNFXXXXXXXXXXXXXXXXXXE--YTPFPPPQPESEAN 333
LMIKRELAKDP L +E+W+RFLPNF + YTPFPP +S+ +
Sbjct: 202 LMIKRELAKDPTLAHESWDRFLPNFKKRTLSKRRTPFKVTDKSKKVYTPFPPAPEKSKVD 261
Score = 217 (81.4 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 67/184 (36%), Positives = 106/184 (57%)
Query: 2 ENAWSMKIPEFKKEDNPHEYLKECWPLVKNALELHFIKAELDVIEGSMTVFTTRKTWDPY 61
E++++ P++++ YLKE WP+V ALE H I LD++EGSMTV TTRKT+DP
Sbjct: 37 ESSFATLFPKYREV-----YLKEAWPVVTRALEKHGIACTLDLVEGSMTVKTTRKTYDPA 91
Query: 62 IIIKARDMIKLLSRSVPYEP-LK--EEYLKECWPL-VKNAL--ELHFIKAELDVI--EGS 113
I+KARD+IKLLSRSVP + LK E+ + C + ++N + + F+K ++ +GS
Sbjct: 92 AILKARDLIKLLSRSVPVQQALKILEDGVA-CDIIKIRNQVRNKERFVKRRQRILGPQGS 150
Query: 114 MTVFTTRKTWDPYIIIKARDMIKLLSRSVPYE--QAVRVLQDDISCDIIKIGNLVQNKQR 171
T+ YI+++ + S PY+ + VR + DD +I I ++ K+
Sbjct: 151 -TLKALELLTGTYILVQGNTV----SAMGPYKGLKEVRRIVDDCMANIHPIYHI---KEL 202
Query: 172 FVKR 175
+KR
Sbjct: 203 MIKR 206
Score = 40 (19.1 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 8 KIPEFKKEDN 17
KI EFK EDN
Sbjct: 20 KIEEFKPEDN 29
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 334 316 0.00082 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 606 (64 KB)
Total size of DFA: 220 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.28u 0.08s 24.36t Elapsed: 00:00:25
Total cpu time: 24.28u 0.08s 24.36t Elapsed: 00:00:29
Start: Thu Aug 15 13:38:07 2013 End: Thu Aug 15 13:38:36 2013