Query psy15014
Match_columns 286
No_of_seqs 197 out of 1153
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 18:14:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t5c_A CENP-E protein, centrom 100.0 1.2E-43 4.1E-48 337.2 16.6 157 1-282 84-240 (349)
2 2vvg_A Kinesin-2; motor protei 100.0 1.7E-43 5.8E-48 336.2 13.7 152 1-282 96-247 (350)
3 2owm_A Nckin3-434, related to 100.0 8.2E-43 2.8E-47 340.5 18.0 163 1-282 143-305 (443)
4 4a14_A Kinesin, kinesin-like p 100.0 3.4E-43 1.2E-47 333.4 14.8 163 1-282 90-255 (344)
5 3lre_A Kinesin-like protein KI 100.0 4.8E-43 1.7E-47 333.7 15.6 153 1-282 112-264 (355)
6 1bg2_A Kinesin; motor protein, 100.0 5.3E-43 1.8E-47 329.9 13.2 154 1-282 84-237 (325)
7 2h58_A Kinesin-like protein KI 100.0 1.2E-42 4E-47 328.1 15.1 154 1-282 87-240 (330)
8 3cob_A Kinesin heavy chain-lik 100.0 1.9E-42 6.6E-47 331.0 15.4 154 1-282 86-239 (369)
9 2zfi_A Kinesin-like protein KI 100.0 6E-43 2.1E-47 334.2 11.8 159 1-282 96-254 (366)
10 3bfn_A Kinesin-like protein KI 100.0 1.7E-42 5.8E-47 333.0 14.5 155 1-282 105-259 (388)
11 3gbj_A KIF13B protein; kinesin 100.0 8.8E-43 3E-47 331.8 12.0 159 1-283 99-257 (354)
12 2heh_A KIF2C protein; kinesin, 100.0 1.2E-42 4.2E-47 333.9 12.5 152 1-282 141-292 (387)
13 1v8k_A Kinesin-like protein KI 100.0 1.9E-42 6.4E-47 334.7 13.5 152 1-282 161-312 (410)
14 2y65_A Kinesin, kinesin heavy 100.0 1.8E-42 6.1E-47 330.8 12.8 154 1-282 91-244 (365)
15 3b6u_A Kinesin-like protein KI 100.0 1.4E-42 4.9E-47 332.1 11.3 157 1-282 108-264 (372)
16 1goj_A Kinesin, kinesin heavy 100.0 3.2E-42 1.1E-46 328.0 12.4 155 1-282 87-241 (355)
17 2nr8_A Kinesin-like protein KI 100.0 3.3E-42 1.1E-46 328.2 10.9 160 1-282 110-269 (358)
18 2rep_A Kinesin-like protein KI 100.0 1.9E-41 6.6E-46 324.7 14.5 161 1-282 122-284 (376)
19 3nwn_A Kinesin-like protein KI 100.0 6.1E-42 2.1E-46 326.5 10.9 160 1-282 111-270 (359)
20 2wbe_C Bipolar kinesin KRP-130 100.0 2.6E-41 8.7E-46 323.7 13.1 159 1-282 107-272 (373)
21 1ry6_A Internal kinesin; kines 100.0 1.4E-41 4.8E-46 324.1 11.2 152 1-282 91-242 (360)
22 3t0q_A AGR253WP; kinesin, alph 100.0 5.7E-41 2E-45 318.7 14.8 161 1-282 92-253 (349)
23 3u06_A Protein claret segregat 100.0 3.5E-41 1.2E-45 326.3 13.6 154 1-282 145-298 (412)
24 1f9v_A Kinesin-like protein KA 100.0 4.2E-41 1.4E-45 319.5 13.7 159 1-282 91-250 (347)
25 1x88_A Kinesin-like protein KI 100.0 1E-41 3.5E-46 325.0 8.4 161 1-282 95-262 (359)
26 4etp_A Kinesin-like protein KA 100.0 5.8E-40 2E-44 317.2 12.1 159 1-282 147-306 (403)
27 4h1g_A Maltose binding protein 100.0 1.5E-38 5.2E-43 325.8 16.2 153 1-282 469-622 (715)
28 3dc4_A Kinesin-like protein NO 100.0 1E-38 3.4E-43 302.8 10.1 147 1-282 101-247 (344)
29 2o0a_A S.cerevisiae chromosome 99.0 3.7E-11 1.3E-15 110.5 -0.3 45 1-74 99-145 (298)
30 3ec2_A DNA replication protein 81.9 0.31 1E-05 39.9 0.3 13 1-13 44-56 (180)
31 2kjq_A DNAA-related protein; s 78.6 0.44 1.5E-05 38.6 0.2 13 1-13 42-54 (149)
32 2w58_A DNAI, primosome compone 75.2 0.53 1.8E-05 39.0 -0.3 13 1-13 60-72 (202)
33 2qgz_A Helicase loader, putati 72.7 0.66 2.3E-05 42.1 -0.3 13 1-13 158-170 (308)
34 1jbk_A CLPB protein; beta barr 72.7 0.65 2.2E-05 36.9 -0.3 13 1-13 49-61 (195)
35 2p65_A Hypothetical protein PF 72.1 0.64 2.2E-05 37.1 -0.5 13 1-13 49-61 (187)
36 1ixz_A ATP-dependent metallopr 70.8 0.77 2.6E-05 39.6 -0.3 12 1-12 55-66 (254)
37 2r62_A Cell division protease 68.8 1 3.4E-05 39.0 0.0 12 1-12 50-61 (268)
38 3bos_A Putative DNA replicatio 68.7 0.91 3.1E-05 37.8 -0.3 13 1-13 58-70 (242)
39 2eyu_A Twitching motility prot 68.7 1 3.6E-05 39.9 0.1 11 2-12 32-42 (261)
40 2chg_A Replication factor C sm 67.2 1 3.5E-05 36.6 -0.3 12 1-12 44-55 (226)
41 2qz4_A Paraplegin; AAA+, SPG7, 66.5 1.1 3.7E-05 38.4 -0.3 41 1-41 45-96 (262)
42 3jvv_A Twitching mobility prot 66.0 1.3 4.3E-05 41.4 0.1 12 2-13 130-141 (356)
43 1l8q_A Chromosomal replication 66.0 1.1 3.9E-05 40.0 -0.2 12 1-12 43-54 (324)
44 1iy2_A ATP-dependent metallopr 64.7 1.2 4.1E-05 39.1 -0.3 12 1-12 79-90 (278)
45 1lv7_A FTSH; alpha/beta domain 64.7 1.2 4.1E-05 38.4 -0.3 12 1-12 51-62 (257)
46 3n70_A Transport activator; si 64.3 1.3 4.6E-05 35.0 -0.1 12 1-12 30-41 (145)
47 3co5_A Putative two-component 63.7 1 3.5E-05 35.7 -0.9 13 1-13 33-45 (143)
48 1ofh_A ATP-dependent HSL prote 63.6 1.3 4.5E-05 38.7 -0.3 12 1-12 56-67 (310)
49 2oap_1 GSPE-2, type II secreti 63.5 1.3 4.6E-05 43.3 -0.3 11 2-12 267-277 (511)
50 3llm_A ATP-dependent RNA helic 63.2 1.5 5.2E-05 37.5 0.0 11 2-12 83-93 (235)
51 1p9r_A General secretion pathw 63.2 1.5 5.3E-05 41.8 0.1 11 2-12 174-184 (418)
52 1d2n_A N-ethylmaleimide-sensit 62.9 1.4 4.8E-05 38.4 -0.3 12 1-12 70-81 (272)
53 3h4m_A Proteasome-activating n 61.8 1.5 5.2E-05 38.1 -0.2 41 1-41 57-108 (285)
54 2ewv_A Twitching motility prot 61.7 1.7 6E-05 40.5 0.1 12 2-13 143-154 (372)
55 3a00_A Guanylate kinase, GMP k 61.3 1.8 6.2E-05 35.6 0.1 11 2-12 8-18 (186)
56 3cf0_A Transitional endoplasmi 60.8 1.6 5.6E-05 38.9 -0.2 12 1-12 55-66 (301)
57 3syl_A Protein CBBX; photosynt 60.1 1.5 5E-05 38.7 -0.7 12 1-12 73-84 (309)
58 3tr0_A Guanylate kinase, GMP k 59.9 1.9 6.5E-05 35.4 0.0 11 2-12 14-24 (205)
59 1njg_A DNA polymerase III subu 59.5 1.7 5.9E-05 35.6 -0.3 12 1-12 51-62 (250)
60 3te6_A Regulatory protein SIR3 59.3 1.4 4.7E-05 40.7 -1.0 12 1-12 51-62 (318)
61 4gp7_A Metallophosphoesterase; 59.2 2 6.8E-05 35.0 0.0 12 2-13 16-27 (171)
62 4b4t_K 26S protease regulatory 59.2 4.4 0.00015 38.9 2.4 42 1-42 212-264 (428)
63 1in4_A RUVB, holliday junction 59.1 1.8 6.1E-05 39.3 -0.3 12 1-12 57-68 (334)
64 3b9p_A CG5977-PA, isoform A; A 59.0 1.8 6.3E-05 37.9 -0.2 41 1-41 60-111 (297)
65 1sxj_C Activator 1 40 kDa subu 58.6 1.9 6.4E-05 39.0 -0.2 12 1-12 52-63 (340)
66 2z4s_A Chromosomal replication 57.8 2 6.8E-05 40.9 -0.2 12 1-12 136-147 (440)
67 1g8p_A Magnesium-chelatase 38 57.8 2.1 7.1E-05 38.2 -0.1 12 1-12 51-62 (350)
68 1lvg_A Guanylate kinase, GMP k 57.5 2.2 7.6E-05 35.7 0.0 11 2-12 11-21 (198)
69 2v1u_A Cell division control p 57.3 2.3 7.9E-05 38.1 0.1 12 1-12 50-61 (387)
70 2bjv_A PSP operon transcriptio 56.9 2 6.9E-05 37.1 -0.3 12 1-12 35-46 (265)
71 2gxq_A Heat resistant RNA depe 56.3 2.4 8.1E-05 34.8 0.0 11 2-12 45-55 (207)
72 1kgd_A CASK, peripheral plasma 55.9 2.4 8.3E-05 34.6 0.0 11 2-12 12-22 (180)
73 1vec_A ATP-dependent RNA helic 55.9 2.6 8.8E-05 34.6 0.2 11 2-12 47-57 (206)
74 2x8a_A Nuclear valosin-contain 55.7 2.2 7.5E-05 37.9 -0.3 41 1-41 50-101 (274)
75 4b4t_M 26S protease regulatory 55.6 5.2 0.00018 38.4 2.3 42 1-42 221-273 (434)
76 4b3f_X DNA-binding protein smu 55.3 2.5 8.6E-05 42.1 0.0 12 2-13 212-223 (646)
77 1xwi_A SKD1 protein; VPS4B, AA 54.9 2.4 8.1E-05 38.5 -0.2 41 1-41 51-103 (322)
78 3t15_A Ribulose bisphosphate c 54.5 2 7E-05 38.3 -0.7 41 1-41 42-93 (293)
79 3eie_A Vacuolar protein sortin 54.5 2.4 8.2E-05 38.1 -0.3 41 1-41 57-108 (322)
80 4fcw_A Chaperone protein CLPB; 53.9 2.5 8.5E-05 37.1 -0.2 12 1-12 53-64 (311)
81 1znw_A Guanylate kinase, GMP k 53.5 2.8 9.7E-05 35.0 0.1 11 2-12 27-37 (207)
82 2gza_A Type IV secretion syste 52.8 2.6 9E-05 39.0 -0.3 11 2-12 182-192 (361)
83 1ye8_A Protein THEP1, hypothet 52.2 3 0.0001 34.6 0.0 11 2-12 7-17 (178)
84 3c8u_A Fructokinase; YP_612366 52.1 3.3 0.00011 34.6 0.3 11 2-12 29-39 (208)
85 3b9q_A Chloroplast SRP recepto 52.1 3.1 0.0001 37.7 0.0 11 2-12 107-117 (302)
86 3b6e_A Interferon-induced heli 51.9 2.1 7.2E-05 35.1 -1.0 12 2-13 55-66 (216)
87 1qde_A EIF4A, translation init 51.3 3.3 0.00011 34.5 0.1 11 2-12 58-68 (224)
88 3lnc_A Guanylate kinase, GMP k 51.2 3.6 0.00012 34.8 0.4 11 2-12 34-44 (231)
89 3tau_A Guanylate kinase, GMP k 51.0 3.2 0.00011 34.8 0.0 11 2-12 15-25 (208)
90 1sxj_E Activator 1 40 kDa subu 50.9 2.9 0.0001 37.4 -0.3 12 1-12 42-53 (354)
91 2pt7_A CAG-ALFA; ATPase, prote 50.4 3 0.0001 38.2 -0.3 11 2-12 178-188 (330)
92 1z6g_A Guanylate kinase; struc 50.2 3.4 0.00012 35.1 0.1 11 2-12 30-40 (218)
93 1hqc_A RUVB; extended AAA-ATPa 49.6 3.4 0.00011 36.5 -0.1 12 1-12 44-55 (324)
94 4b4t_J 26S protease regulatory 49.5 7 0.00024 37.3 2.1 42 1-42 188-240 (405)
95 1um8_A ATP-dependent CLP prote 49.3 3.2 0.00011 38.0 -0.3 12 1-12 78-89 (376)
96 1w36_D RECD, exodeoxyribonucle 49.2 3.6 0.00012 40.9 0.0 11 2-12 171-181 (608)
97 1fnn_A CDC6P, cell division co 48.6 3.3 0.00011 37.2 -0.3 12 1-12 50-61 (389)
98 1f2t_A RAD50 ABC-ATPase; DNA d 48.5 3.3 0.00011 33.3 -0.3 12 1-12 29-40 (149)
99 1sxj_D Activator 1 41 kDa subu 48.5 3.4 0.00011 36.8 -0.3 12 1-12 64-75 (353)
100 4b4t_H 26S protease regulatory 48.3 9.1 0.00031 37.2 2.7 42 1-42 249-301 (467)
101 3uk6_A RUVB-like 2; hexameric 48.2 3 0.0001 37.6 -0.7 12 1-12 76-87 (368)
102 2pl3_A Probable ATP-dependent 48.0 4 0.00014 34.4 0.1 11 2-12 69-79 (236)
103 2r44_A Uncharacterized protein 47.9 2.7 9.3E-05 37.5 -1.0 12 1-12 52-63 (331)
104 1rj9_A FTSY, signal recognitio 47.8 4 0.00014 37.1 0.1 11 2-12 109-119 (304)
105 3iuy_A Probable ATP-dependent 47.7 4 0.00014 34.2 0.1 11 2-12 64-74 (228)
106 3d8b_A Fidgetin-like protein 1 47.5 3.6 0.00012 37.7 -0.3 41 1-41 123-174 (357)
107 2ehv_A Hypothetical protein PH 47.4 4 0.00014 34.3 0.0 12 1-12 36-47 (251)
108 2bdt_A BH3686; alpha-beta prot 47.2 4.1 0.00014 33.1 0.1 11 2-12 9-19 (189)
109 3bor_A Human initiation factor 46.9 3.5 0.00012 35.0 -0.4 12 1-12 73-84 (237)
110 3hws_A ATP-dependent CLP prote 46.6 3.8 0.00013 37.3 -0.3 12 1-12 57-68 (363)
111 2j41_A Guanylate kinase; GMP, 46.4 4.3 0.00015 33.2 0.1 11 2-12 13-23 (207)
112 1t6n_A Probable ATP-dependent 46.3 4.3 0.00015 33.7 0.0 11 2-12 58-68 (220)
113 2qp9_X Vacuolar protein sortin 46.2 3.8 0.00013 37.6 -0.3 12 1-12 90-101 (355)
114 3kta_A Chromosome segregation 46.1 3.3 0.00011 33.4 -0.7 12 1-12 32-43 (182)
115 2chq_A Replication factor C sm 46.1 4 0.00014 35.6 -0.2 12 1-12 44-55 (319)
116 2w0m_A SSO2452; RECA, SSPF, un 46.0 3.8 0.00013 33.8 -0.3 12 1-12 29-40 (235)
117 3pfi_A Holliday junction ATP-d 46.0 3.9 0.00013 36.5 -0.3 12 1-12 61-72 (338)
118 3dkp_A Probable ATP-dependent 45.9 4.5 0.00015 34.3 0.1 11 2-12 73-83 (245)
119 3u61_B DNA polymerase accessor 45.9 4.7 0.00016 35.8 0.2 12 1-12 54-65 (324)
120 4ag6_A VIRB4 ATPase, type IV s 45.8 4.4 0.00015 37.4 0.0 11 2-12 42-52 (392)
121 1iqp_A RFCS; clamp loader, ext 45.6 4 0.00014 35.7 -0.3 12 1-12 52-63 (327)
122 2i3b_A HCR-ntpase, human cance 45.0 4.7 0.00016 33.9 0.1 11 2-12 8-18 (189)
123 3e70_C DPA, signal recognition 44.8 4.6 0.00016 37.1 0.0 11 2-12 136-146 (328)
124 3asz_A Uridine kinase; cytidin 44.7 4.1 0.00014 33.7 -0.3 11 2-12 13-23 (211)
125 2qby_A CDC6 homolog 1, cell di 44.6 3.7 0.00013 36.7 -0.7 12 1-12 51-62 (386)
126 1zp6_A Hypothetical protein AT 44.4 4.1 0.00014 32.9 -0.3 11 2-12 16-26 (191)
127 2og2_A Putative signal recogni 44.0 4.9 0.00017 37.6 0.0 11 2-12 164-174 (359)
128 3ly5_A ATP-dependent RNA helic 43.7 5.1 0.00017 34.8 0.1 11 2-12 98-108 (262)
129 3lw7_A Adenylate kinase relate 43.7 5.2 0.00018 31.2 0.2 11 2-12 8-18 (179)
130 2px0_A Flagellar biosynthesis 43.5 4.5 0.00015 36.5 -0.3 12 2-13 112-123 (296)
131 3tif_A Uncharacterized ABC tra 43.3 5.1 0.00017 34.7 0.1 11 2-12 38-48 (235)
132 3ber_A Probable ATP-dependent 42.9 5.2 0.00018 34.5 0.0 11 2-12 87-97 (249)
133 2qby_B CDC6 homolog 3, cell di 42.7 4.1 0.00014 36.7 -0.7 12 1-12 51-62 (384)
134 1wrb_A DJVLGB; RNA helicase, D 42.7 5 0.00017 34.2 -0.1 11 2-12 67-77 (253)
135 3vfd_A Spastin; ATPase, microt 42.6 4.7 0.00016 37.2 -0.3 41 1-41 154-205 (389)
136 1hv8_A Putative ATP-dependent 42.6 5.4 0.00018 35.2 0.1 11 2-12 51-61 (367)
137 1n0w_A DNA repair protein RAD5 42.4 4.7 0.00016 33.8 -0.3 12 1-12 30-41 (243)
138 3fe2_A Probable ATP-dependent 42.3 4.8 0.00016 34.2 -0.3 11 2-12 73-83 (242)
139 4b4t_I 26S protease regulatory 42.2 16 0.00053 35.3 3.3 42 1-42 222-274 (437)
140 2gk6_A Regulator of nonsense t 42.1 5.4 0.00018 39.6 0.0 12 2-13 202-213 (624)
141 3b85_A Phosphate starvation-in 42.0 6.4 0.00022 33.5 0.5 11 2-12 29-39 (208)
142 1q0u_A Bstdead; DEAD protein, 42.0 4.4 0.00015 33.8 -0.6 11 2-12 48-58 (219)
143 4a74_A DNA repair and recombin 41.9 4.8 0.00017 33.3 -0.3 12 1-12 31-42 (231)
144 2c9o_A RUVB-like 1; hexameric 41.5 5.1 0.00017 38.0 -0.3 12 1-12 69-80 (456)
145 2oxc_A Probable ATP-dependent 41.4 5.8 0.0002 33.4 0.1 11 2-12 68-78 (230)
146 1rif_A DAR protein, DNA helica 41.2 5.7 0.00019 34.7 0.0 12 2-13 135-146 (282)
147 2zan_A Vacuolar protein sortin 41.1 5.1 0.00018 38.0 -0.3 12 1-12 173-184 (444)
148 4b4t_L 26S protease subunit RP 40.9 5.3 0.00018 38.4 -0.2 42 1-42 221-273 (437)
149 1e9r_A Conjugal transfer prote 40.7 5.2 0.00018 37.4 -0.3 12 1-12 59-70 (437)
150 1tue_A Replication protein E1; 40.2 5.1 0.00017 35.0 -0.4 13 1-13 64-76 (212)
151 2orw_A Thymidine kinase; TMTK, 39.8 4.3 0.00015 33.8 -1.0 14 1-14 9-22 (184)
152 2z0m_A 337AA long hypothetical 39.5 6.3 0.00022 34.3 0.0 12 2-13 38-49 (337)
153 2b8t_A Thymidine kinase; deoxy 39.2 5.1 0.00018 34.8 -0.6 14 1-14 18-31 (223)
154 1xx6_A Thymidine kinase; NESG, 39.1 5.2 0.00018 33.8 -0.6 14 1-14 14-27 (191)
155 1ojl_A Transcriptional regulat 39.0 6.1 0.00021 35.4 -0.2 12 1-12 31-42 (304)
156 3fmo_B ATP-dependent RNA helic 38.9 6.7 0.00023 35.0 0.1 11 2-12 138-148 (300)
157 1jr3_A DNA polymerase III subu 38.1 6.1 0.00021 35.4 -0.3 12 1-12 44-55 (373)
158 1vma_A Cell division protein F 38.1 6.8 0.00023 35.6 0.0 12 2-13 111-122 (306)
159 3eiq_A Eukaryotic initiation f 37.9 7.6 0.00026 35.1 0.3 11 2-12 84-94 (414)
160 3aez_A Pantothenate kinase; tr 37.8 6.9 0.00024 35.5 0.0 11 2-12 97-107 (312)
161 3pey_A ATP-dependent RNA helic 37.8 6.9 0.00024 34.8 0.0 11 2-12 51-61 (395)
162 1sxj_B Activator 1 37 kDa subu 37.8 6.2 0.00021 34.4 -0.3 12 1-12 48-59 (323)
163 1htw_A HI0065; nucleotide-bind 37.7 7.1 0.00024 31.8 0.1 11 2-12 40-50 (158)
164 3qks_A DNA double-strand break 37.6 6.2 0.00021 33.2 -0.3 12 1-12 29-40 (203)
165 3h1t_A Type I site-specific re 37.4 6.1 0.00021 38.4 -0.5 12 2-13 205-216 (590)
166 3gfo_A Cobalt import ATP-bindi 37.1 7.2 0.00025 34.8 0.0 11 2-12 41-51 (275)
167 4g1u_C Hemin import ATP-bindin 37.1 7.2 0.00025 34.5 0.0 11 2-12 44-54 (266)
168 3pvs_A Replication-associated 37.0 6.5 0.00022 37.6 -0.3 12 1-12 56-67 (447)
169 2cvh_A DNA repair and recombin 37.0 6.4 0.00022 32.3 -0.3 13 1-13 26-38 (220)
170 2jeo_A Uridine-cytidine kinase 37.0 7.4 0.00025 33.3 0.1 11 2-12 32-42 (245)
171 1w5s_A Origin recognition comp 36.9 7.7 0.00026 35.1 0.2 12 1-12 58-69 (412)
172 3hu3_A Transitional endoplasmi 36.8 6.6 0.00023 38.0 -0.3 41 1-41 244-295 (489)
173 2jlq_A Serine protease subunit 36.5 9.7 0.00033 35.9 0.8 10 2-11 26-35 (451)
174 1ly1_A Polynucleotide kinase; 35.8 8.3 0.00028 30.5 0.2 11 2-12 9-19 (181)
175 2onk_A Molybdate/tungstate ABC 35.8 7.8 0.00027 33.7 0.0 11 2-12 31-41 (240)
176 1s96_A Guanylate kinase, GMP k 35.7 7.8 0.00027 33.2 0.0 11 2-12 23-33 (219)
177 2pcj_A ABC transporter, lipopr 35.7 6.9 0.00023 33.5 -0.3 11 2-12 37-47 (224)
178 1yks_A Genome polyprotein [con 35.6 10 0.00035 35.8 0.8 11 2-12 15-25 (440)
179 1xjc_A MOBB protein homolog; s 35.6 7.9 0.00027 32.2 0.0 12 2-13 11-22 (169)
180 2i4i_A ATP-dependent RNA helic 35.6 7.9 0.00027 35.0 0.0 11 2-12 59-69 (417)
181 1kag_A SKI, shikimate kinase I 35.5 8.4 0.00029 30.5 0.2 11 2-12 11-21 (173)
182 1qhx_A CPT, protein (chloramph 35.4 8.4 0.00029 30.6 0.2 11 2-12 10-20 (178)
183 1ji0_A ABC transporter; ATP bi 35.4 8.1 0.00028 33.5 0.1 11 2-12 39-49 (240)
184 1g6h_A High-affinity branched- 35.3 8.1 0.00028 33.8 0.1 11 2-12 40-50 (257)
185 1sxj_A Activator 1 95 kDa subu 35.2 7.3 0.00025 37.6 -0.3 12 1-12 83-94 (516)
186 2dhr_A FTSH; AAA+ protein, hex 35.1 7.4 0.00025 37.9 -0.2 12 1-12 70-81 (499)
187 3auy_A DNA double-strand break 35.0 7 0.00024 36.0 -0.4 12 1-12 31-42 (371)
188 2v6i_A RNA helicase; membrane, 35.0 11 0.00036 35.5 0.8 11 2-12 9-19 (431)
189 1b0u_A Histidine permease; ABC 34.9 8.3 0.00028 34.0 0.0 11 2-12 39-49 (262)
190 1sgw_A Putative ABC transporte 34.8 8.3 0.00028 33.1 0.0 11 2-12 42-52 (214)
191 1s2m_A Putative ATP-dependent 34.7 8 0.00027 34.9 -0.1 11 2-12 65-75 (400)
192 2fz4_A DNA repair protein RAD2 34.6 7.5 0.00025 33.4 -0.3 12 2-13 115-126 (237)
193 3fmp_B ATP-dependent RNA helic 34.6 8.8 0.0003 36.0 0.2 10 2-11 138-147 (479)
194 3uie_A Adenylyl-sulfate kinase 34.5 8.5 0.00029 31.7 0.1 11 2-12 32-42 (200)
195 2z83_A Helicase/nucleoside tri 34.2 11 0.00038 35.7 0.8 11 2-12 28-38 (459)
196 2j0s_A ATP-dependent RNA helic 34.2 8.6 0.00029 34.8 0.0 11 2-12 81-91 (410)
197 2ff7_A Alpha-hemolysin translo 34.1 8.7 0.0003 33.5 0.1 11 2-12 42-52 (247)
198 3trf_A Shikimate kinase, SK; a 33.9 9.3 0.00032 30.7 0.2 11 2-12 12-22 (185)
199 3rlf_A Maltose/maltodextrin im 33.8 8.8 0.0003 36.2 0.0 11 2-12 36-46 (381)
200 1knq_A Gluconate kinase; ALFA/ 33.5 9 0.00031 30.5 0.1 11 2-12 15-25 (175)
201 1mv5_A LMRA, multidrug resista 33.5 9 0.00031 33.2 0.0 11 2-12 35-45 (243)
202 2yz2_A Putative ABC transporte 33.5 9.1 0.00031 33.7 0.1 11 2-12 40-50 (266)
203 3fht_A ATP-dependent RNA helic 33.4 9.2 0.00031 34.4 0.1 11 2-12 71-81 (412)
204 2pze_A Cystic fibrosis transme 33.3 9.1 0.00031 32.9 0.0 11 2-12 41-51 (229)
205 2cbz_A Multidrug resistance-as 33.1 9.3 0.00032 33.1 0.1 11 2-12 38-48 (237)
206 3fho_A ATP-dependent RNA helic 33.1 10 0.00035 36.3 0.4 11 2-12 165-175 (508)
207 3sop_A Neuronal-specific septi 33.0 8.3 0.00028 34.1 -0.3 11 2-12 9-19 (270)
208 2f1r_A Molybdopterin-guanine d 33.0 5.5 0.00019 33.0 -1.4 19 207-225 140-158 (171)
209 1rz3_A Hypothetical protein rb 32.9 8.1 0.00028 32.0 -0.3 11 2-12 29-39 (201)
210 2yyz_A Sugar ABC transporter, 32.9 9.4 0.00032 35.6 0.1 11 2-12 36-46 (359)
211 1vpl_A ABC transporter, ATP-bi 32.9 9.3 0.00032 33.6 0.0 11 2-12 48-58 (256)
212 3kb2_A SPBC2 prophage-derived 32.8 10 0.00035 29.7 0.3 11 2-12 8-18 (173)
213 3tqc_A Pantothenate kinase; bi 32.8 9.3 0.00032 35.0 0.0 11 2-12 99-109 (321)
214 2ze6_A Isopentenyl transferase 32.7 9.9 0.00034 33.0 0.2 10 2-11 8-17 (253)
215 2yhs_A FTSY, cell division pro 32.6 9.5 0.00032 37.4 0.0 11 2-12 300-310 (503)
216 2r2a_A Uncharacterized protein 32.5 9.6 0.00033 32.3 0.0 13 1-13 11-23 (199)
217 2d2e_A SUFC protein; ABC-ATPas 32.5 9.6 0.00033 33.2 0.1 11 2-12 36-46 (250)
218 4eun_A Thermoresistant glucoki 32.3 9.6 0.00033 31.4 0.0 11 2-12 36-46 (200)
219 1z47_A CYSA, putative ABC-tran 32.3 9.7 0.00033 35.5 0.1 11 2-12 48-58 (355)
220 2ghi_A Transport protein; mult 32.2 9.8 0.00033 33.4 0.1 11 2-12 53-63 (260)
221 2r8r_A Sensor protein; KDPD, P 32.2 9.9 0.00034 33.4 0.1 12 2-13 13-24 (228)
222 1kht_A Adenylate kinase; phosp 32.0 10 0.00035 30.2 0.2 11 2-12 10-20 (192)
223 2wjy_A Regulator of nonsense t 31.9 9.9 0.00034 39.2 0.0 12 2-13 378-389 (800)
224 2bbw_A Adenylate kinase 4, AK4 31.8 9.9 0.00034 32.4 0.0 11 2-12 34-44 (246)
225 1e69_A Chromosome segregation 31.8 10 0.00035 34.1 0.1 12 1-12 30-41 (322)
226 2olj_A Amino acid ABC transpor 31.8 10 0.00034 33.6 0.0 11 2-12 57-67 (263)
227 2it1_A 362AA long hypothetical 31.6 10 0.00034 35.4 0.0 11 2-12 36-46 (362)
228 1sq5_A Pantothenate kinase; P- 31.6 8.9 0.0003 34.4 -0.3 11 2-12 87-97 (308)
229 2qor_A Guanylate kinase; phosp 31.6 10 0.00034 31.4 0.0 11 2-12 19-29 (204)
230 3fvq_A Fe(3+) IONS import ATP- 31.6 9 0.00031 35.8 -0.3 11 2-12 37-47 (359)
231 2nq2_C Hypothetical ABC transp 31.4 10 0.00035 33.2 0.1 11 2-12 38-48 (253)
232 1g29_1 MALK, maltose transport 31.3 10 0.00035 35.4 0.1 11 2-12 36-46 (372)
233 1cke_A CK, MSSA, protein (cyti 31.2 11 0.00037 31.3 0.2 11 2-12 12-22 (227)
234 2fwr_A DNA repair protein RAD2 31.1 9.9 0.00034 35.5 -0.1 12 2-13 115-126 (472)
235 3m6a_A ATP-dependent protease 31.1 9.6 0.00033 37.2 -0.2 12 1-12 114-125 (543)
236 1fuu_A Yeast initiation factor 31.0 8.3 0.00028 34.5 -0.6 11 2-12 65-75 (394)
237 1jjv_A Dephospho-COA kinase; P 31.0 11 0.00036 31.0 0.1 11 2-12 9-19 (206)
238 2w00_A HSDR, R.ECOR124I; ATP-b 30.9 9.8 0.00033 40.5 -0.2 11 3-13 308-318 (1038)
239 2zu0_C Probable ATP-dependent 30.9 11 0.00036 33.4 0.0 11 2-12 53-63 (267)
240 2ihy_A ABC transporter, ATP-bi 30.9 11 0.00036 33.7 0.0 11 2-12 54-64 (279)
241 1xti_A Probable ATP-dependent 30.8 11 0.00037 33.7 0.1 11 2-12 52-62 (391)
242 2pjz_A Hypothetical protein ST 30.8 11 0.00036 33.4 0.0 11 2-12 37-47 (263)
243 2ce7_A Cell division protein F 30.8 9.4 0.00032 37.0 -0.3 41 1-41 55-106 (476)
244 1qhl_A Protein (cell division 30.7 8.4 0.00029 33.5 -0.6 11 2-12 34-44 (227)
245 2db3_A ATP-dependent RNA helic 30.6 10 0.00035 35.4 -0.1 11 2-12 100-110 (434)
246 1np6_A Molybdopterin-guanine d 30.6 11 0.00037 31.3 0.0 20 207-226 149-168 (174)
247 3iij_A Coilin-interacting nucl 30.4 12 0.0004 30.1 0.2 12 1-12 17-28 (180)
248 1v43_A Sugar-binding transport 30.2 11 0.00038 35.3 0.0 11 2-12 44-54 (372)
249 2oca_A DAR protein, ATP-depend 30.1 11 0.00036 35.7 -0.1 12 2-13 135-146 (510)
250 2qi9_C Vitamin B12 import ATP- 30.0 11 0.00038 33.0 0.0 11 2-12 33-43 (249)
251 2ius_A DNA translocase FTSK; n 29.9 11 0.00038 36.9 0.0 11 2-12 174-184 (512)
252 3vaa_A Shikimate kinase, SK; s 29.8 12 0.00041 30.8 0.2 11 2-12 32-42 (199)
253 2xzl_A ATP-dependent helicase 29.7 11 0.00039 38.7 0.1 12 2-13 382-393 (802)
254 3rc3_A ATP-dependent RNA helic 29.5 12 0.00041 37.9 0.2 11 2-12 162-172 (677)
255 2ixe_A Antigen peptide transpo 29.5 12 0.0004 33.2 0.1 11 2-12 52-62 (271)
256 3d31_A Sulfate/molybdate ABC t 29.4 9.1 0.00031 35.5 -0.7 11 2-12 33-43 (348)
257 3qkt_A DNA double-strand break 29.3 10 0.00035 34.4 -0.3 12 1-12 29-40 (339)
258 3pxi_A Negative regulator of g 29.3 11 0.00037 38.2 -0.2 12 1-12 527-538 (758)
259 2dr3_A UPF0273 protein PH0284; 29.1 9 0.00031 31.9 -0.7 12 1-12 29-40 (247)
260 3upu_A ATP-dependent DNA helic 29.1 12 0.0004 35.4 0.0 11 2-12 52-62 (459)
261 3o8b_A HCV NS3 protease/helica 29.0 14 0.00049 37.4 0.6 20 208-227 398-417 (666)
262 1zu4_A FTSY; GTPase, signal re 29.0 12 0.00041 34.1 0.1 12 2-13 112-123 (320)
263 2iut_A DNA translocase FTSK; n 29.0 12 0.00041 37.3 0.0 12 1-12 220-231 (574)
264 3gd7_A Fusion complex of cysti 29.0 11 0.00036 35.6 -0.3 11 2-12 54-64 (390)
265 1odf_A YGR205W, hypothetical 3 28.9 12 0.00041 33.5 0.0 11 2-12 38-48 (290)
266 1w36_B RECB, exodeoxyribonucle 28.8 11 0.00037 40.4 -0.3 39 160-204 381-420 (1180)
267 3oiy_A Reverse gyrase helicase 28.8 13 0.00046 33.8 0.4 11 2-12 43-53 (414)
268 1e6c_A Shikimate kinase; phosp 28.3 13 0.00045 29.2 0.2 11 2-12 9-19 (173)
269 3kl4_A SRP54, signal recogniti 28.2 12 0.00043 35.7 0.0 11 2-12 104-114 (433)
270 3lfu_A DNA helicase II; SF1 he 28.2 11 0.00038 36.7 -0.3 12 2-13 29-40 (647)
271 3ney_A 55 kDa erythrocyte memb 28.0 13 0.00043 31.7 0.0 11 2-12 26-36 (197)
272 1tev_A UMP-CMP kinase; ploop, 27.9 13 0.00046 29.5 0.2 11 2-12 10-20 (196)
273 1wp9_A ATP-dependent RNA helic 27.8 12 0.00042 33.8 -0.1 12 2-13 30-41 (494)
274 2jaq_A Deoxyguanosine kinase; 27.6 14 0.00047 29.8 0.2 11 2-12 7-17 (205)
275 1oxx_K GLCV, glucose, ABC tran 27.4 9.2 0.00032 35.4 -1.0 11 2-12 38-48 (353)
276 1r6b_X CLPA protein; AAA+, N-t 27.4 12 0.00041 37.7 -0.3 12 1-12 494-505 (758)
277 3nbx_X ATPase RAVA; AAA+ ATPas 27.3 12 0.00041 36.4 -0.3 12 1-12 47-58 (500)
278 3e1s_A Exodeoxyribonuclease V, 27.2 13 0.00045 36.6 0.0 12 2-13 211-222 (574)
279 3pxg_A Negative regulator of g 27.0 13 0.00044 35.5 -0.1 13 1-13 207-219 (468)
280 3t61_A Gluconokinase; PSI-biol 26.9 14 0.00049 30.1 0.2 11 2-12 25-35 (202)
281 2o5v_A DNA replication and rep 26.9 12 0.00041 34.8 -0.3 12 1-12 32-43 (359)
282 3qf7_A RAD50; ABC-ATPase, ATPa 26.9 14 0.00047 34.1 0.0 12 1-12 29-40 (365)
283 4e22_A Cytidylate kinase; P-lo 26.9 14 0.00047 32.0 0.0 28 2-34 34-67 (252)
284 2rhm_A Putative kinase; P-loop 26.8 13 0.00043 29.8 -0.2 11 2-12 12-22 (193)
285 1nij_A Hypothetical protein YJ 26.8 13 0.00046 33.4 -0.0 11 2-12 11-21 (318)
286 3nh6_A ATP-binding cassette SU 26.7 11 0.00038 34.2 -0.6 11 2-12 87-97 (306)
287 2qt1_A Nicotinamide riboside k 26.6 12 0.00042 30.7 -0.3 11 2-12 28-38 (207)
288 1uf9_A TT1252 protein; P-loop, 26.4 13 0.00044 30.1 -0.2 11 2-12 15-25 (203)
289 3cm0_A Adenylate kinase; ATP-b 26.4 15 0.00051 29.4 0.2 11 2-12 11-21 (186)
290 2vp4_A Deoxynucleoside kinase; 26.2 14 0.00049 31.2 0.1 11 2-12 27-37 (230)
291 1gvn_B Zeta; postsegregational 26.0 16 0.00056 32.4 0.4 11 2-12 40-50 (287)
292 2bbs_A Cystic fibrosis transme 25.7 13 0.00045 33.4 -0.3 11 2-12 71-81 (290)
293 3a8t_A Adenylate isopentenyltr 25.7 16 0.00056 33.9 0.3 11 2-12 47-57 (339)
294 2pt5_A Shikimate kinase, SK; a 25.6 16 0.00054 28.7 0.2 11 2-12 7-17 (168)
295 2whx_A Serine protease/ntpase/ 25.5 19 0.00065 35.8 0.8 11 2-12 193-203 (618)
296 1via_A Shikimate kinase; struc 25.3 16 0.00054 29.1 0.2 11 2-12 11-21 (175)
297 1qvr_A CLPB protein; coiled co 25.3 15 0.00052 37.7 0.1 12 1-12 594-605 (854)
298 1y63_A LMAJ004144AAA protein; 25.1 16 0.00056 29.6 0.2 11 2-12 17-27 (184)
299 1nlf_A Regulatory protein REPA 25.0 12 0.00041 32.6 -0.7 12 1-12 36-47 (279)
300 2xau_A PRE-mRNA-splicing facto 25.0 15 0.00053 37.5 0.0 11 2-12 116-126 (773)
301 2vli_A Antibiotic resistance p 24.9 17 0.00059 28.8 0.3 11 2-12 12-22 (183)
302 2p5t_B PEZT; postsegregational 24.9 17 0.00057 31.3 0.2 11 2-12 39-49 (253)
303 1ypw_A Transitional endoplasmi 24.8 17 0.00056 37.4 0.2 41 1-41 244-295 (806)
304 2if2_A Dephospho-COA kinase; a 24.6 15 0.0005 30.0 -0.2 11 2-12 8-18 (204)
305 2bwj_A Adenylate kinase 5; pho 24.6 15 0.0005 29.6 -0.2 11 2-12 19-29 (199)
306 3tui_C Methionine import ATP-b 24.5 16 0.00055 34.2 0.0 11 2-12 61-71 (366)
307 2iyv_A Shikimate kinase, SK; t 24.4 17 0.00059 29.0 0.2 11 2-12 9-19 (184)
308 1nks_A Adenylate kinase; therm 24.3 15 0.00051 29.2 -0.2 11 2-12 8-18 (194)
309 2fna_A Conserved hypothetical 24.2 13 0.00044 32.6 -0.7 12 1-12 36-47 (357)
310 3i5x_A ATP-dependent RNA helic 24.2 17 0.00057 34.8 0.1 10 2-11 118-127 (563)
311 2va8_A SSO2462, SKI2-type heli 24.1 16 0.00056 36.3 0.0 11 2-12 53-63 (715)
312 1qf9_A UMP/CMP kinase, protein 23.7 16 0.00054 29.1 -0.2 11 2-12 13-23 (194)
313 2pez_A Bifunctional 3'-phospho 23.7 17 0.00058 29.1 0.0 11 2-12 12-22 (179)
314 1vht_A Dephospho-COA kinase; s 23.5 18 0.00062 29.9 0.2 11 2-12 11-21 (218)
315 2v9p_A Replication protein E1; 23.5 18 0.00061 32.9 0.1 12 1-12 132-143 (305)
316 2pbr_A DTMP kinase, thymidylat 23.4 18 0.00063 28.8 0.2 11 2-12 7-17 (195)
317 2v3c_C SRP54, signal recogniti 23.4 20 0.0007 34.0 0.5 12 2-13 106-117 (432)
318 2yvu_A Probable adenylyl-sulfa 23.4 18 0.00063 29.1 0.2 11 2-12 20-30 (186)
319 2c95_A Adenylate kinase 1; tra 23.3 16 0.00055 29.3 -0.2 11 2-12 16-26 (196)
320 3exa_A TRNA delta(2)-isopenten 23.2 19 0.00066 33.2 0.3 11 2-12 10-20 (322)
321 1u0j_A DNA replication protein 23.1 17 0.00057 32.7 -0.2 12 1-12 110-121 (267)
322 3dm5_A SRP54, signal recogniti 22.9 18 0.00061 34.8 0.0 12 2-13 107-118 (443)
323 1ukz_A Uridylate kinase; trans 22.7 19 0.00066 29.2 0.2 11 2-12 22-32 (203)
324 3foz_A TRNA delta(2)-isopenten 22.7 20 0.00068 33.0 0.3 11 2-12 17-27 (316)
325 3tbk_A RIG-I helicase domain; 22.5 19 0.00064 33.7 0.1 11 2-12 26-36 (555)
326 3crm_A TRNA delta(2)-isopenten 22.5 19 0.00066 33.1 0.2 12 1-12 11-22 (323)
327 3nwn_A Kinesin-like protein KI 22.3 17 0.00057 34.0 -0.3 17 161-177 155-171 (359)
328 1r6b_X CLPA protein; AAA+, N-t 22.3 17 0.00057 36.6 -0.3 12 1-12 213-224 (758)
329 3d3q_A TRNA delta(2)-isopenten 22.2 21 0.00071 33.1 0.3 11 2-12 14-24 (340)
330 2zj8_A DNA helicase, putative 22.0 18 0.00061 36.1 -0.2 11 2-12 46-56 (720)
331 2yv5_A YJEQ protein; hydrolase 21.7 20 0.00068 32.0 0.1 11 2-12 172-182 (302)
332 1c4o_A DNA nucleotide excision 21.6 18 0.0006 36.3 -0.3 13 1-13 34-46 (664)
333 1pui_A ENGB, probable GTP-bind 21.6 17 0.00059 29.4 -0.3 11 2-12 33-43 (210)
334 3ake_A Cytidylate kinase; CMP 21.5 21 0.00072 28.8 0.2 11 2-12 9-19 (208)
335 3fb4_A Adenylate kinase; psych 21.3 21 0.00073 29.3 0.2 11 2-12 7-17 (216)
336 1ypw_A Transitional endoplasmi 21.3 20 0.00067 36.9 -0.1 42 1-42 517-569 (806)
337 1zuh_A Shikimate kinase; alpha 21.3 22 0.00074 28.0 0.2 11 2-12 14-24 (168)
338 1u0l_A Probable GTPase ENGC; p 21.2 21 0.0007 31.8 0.1 11 2-12 176-186 (301)
339 1uaa_A REP helicase, protein ( 21.1 20 0.0007 35.4 0.0 12 2-13 22-33 (673)
340 1w4r_A Thymidine kinase; type 21.0 16 0.00054 31.3 -0.7 11 1-11 26-36 (195)
341 2plr_A DTMP kinase, probable t 20.8 22 0.00076 28.7 0.2 11 2-12 11-21 (213)
342 4aby_A DNA repair protein RECN 20.8 10 0.00035 34.8 -2.1 12 1-12 66-77 (415)
343 1zd8_A GTP:AMP phosphotransfer 20.7 19 0.00067 30.0 -0.2 11 2-12 14-24 (227)
344 4a2p_A RIG-I, retinoic acid in 20.7 22 0.00074 33.4 0.1 11 2-12 29-39 (556)
345 3a4m_A L-seryl-tRNA(SEC) kinas 20.7 22 0.00076 30.7 0.2 11 2-12 11-21 (260)
346 2f9l_A RAB11B, member RAS onco 20.6 22 0.00074 28.7 0.1 11 2-12 12-22 (199)
347 2dyk_A GTP-binding protein; GT 20.5 22 0.00074 27.0 0.0 11 2-12 8-18 (161)
348 1j8m_F SRP54, signal recogniti 20.5 26 0.00088 31.4 0.6 12 2-13 105-116 (297)
349 2zts_A Putative uncharacterize 20.3 21 0.00072 29.6 -0.1 12 1-12 36-47 (251)
350 1lw7_A Transcriptional regulat 20.3 19 0.00066 32.8 -0.3 11 2-12 177-187 (365)
351 2z0h_A DTMP kinase, thymidylat 20.3 23 0.0008 28.3 0.2 11 2-12 7-17 (197)
352 1ex7_A Guanylate kinase; subst 20.2 22 0.00075 29.8 0.0 11 2-12 8-18 (186)
353 1g41_A Heat shock protein HSLU 20.2 21 0.0007 34.4 -0.2 12 1-12 56-67 (444)
354 2qen_A Walker-type ATPase; unk 20.0 20 0.00067 31.3 -0.3 12 1-12 37-48 (350)
No 1
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=337.19 Aligned_cols=157 Identities=34% Similarity=0.509 Sum_probs=135.6
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| .++++|||||++++||+.++.. +...|.|++||+|||||+|+|||.
T Consensus 84 YGqTGSGKTyTM~G------~~~~~Giipr~~~~lF~~i~~~---------~~~~~~v~vS~~EIYnE~i~DLL~----- 143 (349)
T 1t5c_A 84 YGQTASGKTYTMMG------SEDHLGVIPRAIHDIFQKIKKF---------PDREFLLRVSYMEIYNETITDLLC----- 143 (349)
T ss_dssp EESTTSSHHHHHTB------CSSSBCHHHHHHHHHHHHGGGC---------TTEEEEEEEEEEEEETTEEEESSS-----
T ss_pred ecCCCCCCCeEEec------CCCCCchHHHHHHHHHHHHHhC---------cCCcEEEEEEEEEEeCCEEEEccC-----
Confidence 99999999999999 5678999999999999999764 256899999999999999987773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 144 -------------------------------------------------------------------------------- 143 (349)
T 1t5c_A 144 -------------------------------------------------------------------------------- 143 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+... ...|+|+|++++++||+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 144 -------------------~~~~------~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 198 (349)
T 1t5c_A 144 -------------------GTQK------MKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQR 198 (349)
T ss_dssp -------------------SSCT------TCCEEEEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCT
T ss_pred -------------------CCCC------CCCceEEECCCCCEEecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCC
Confidence 1111 467999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|.|++..........+....++|+||||||||+
T Consensus 199 SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr 240 (349)
T 1t5c_A 199 SSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSER 240 (349)
T ss_dssp TTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGG
T ss_pred CCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCcc
Confidence 999999999999997754433344567889999999999996
No 2
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=1.7e-43 Score=336.21 Aligned_cols=152 Identities=36% Similarity=0.542 Sum_probs=124.2
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| ..+++|||||++++||+.++... ....|.|++||+|||||+|+|||.
T Consensus 96 YGqTGSGKTyTm~G------~~~~~Giipr~~~~lF~~i~~~~--------~~~~~~v~vS~~EIYnE~i~DLL~----- 156 (350)
T 2vvg_A 96 YGQTGAGKTWTMGG------NKEEPGAIPNSFKHLFDAINSSS--------SNQNFLVIGSYLELYNEEIRDLIK----- 156 (350)
T ss_dssp ECSTTSSHHHHHTB------CSSSBCHHHHHHHHHHHHHHTCC--------TTEEEEEEEEEEEEETTEEEETTT-----
T ss_pred ecCCCCCCCEEeec------CCccCchHHHHHHHHHHHHHhhc--------cCCcEEEEEEEEEEeCCEEEEccc-----
Confidence 99999999999999 56789999999999999997532 256899999999999999987772
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 157 -------------------------------------------------------------------------------- 156 (350)
T 2vvg_A 157 -------------------------------------------------------------------------------- 156 (350)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+ ...|+|+|++.+++||+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 157 -------------------~---------~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 208 (350)
T 2vvg_A 157 -------------------N---------NTKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDT 208 (350)
T ss_dssp -------------------T---------EEEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------
T ss_pred -------------------C---------CcCceeeEcCCCCEEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCC
Confidence 1 456889999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+.... +.......++|+||||||||+
T Consensus 209 SSRSH~if~i~v~~~~~~---~~~~~~~~skl~lVDLAGSEr 247 (350)
T 2vvg_A 209 SSRSHSIFMVRIECSEVI---ENKEVIRVGKLNLVDLAGSER 247 (350)
T ss_dssp CTTCEEEEEEEEEEEEC-------CEEEEEEEEEEECCCCCC
T ss_pred CCcceEEEEEEEEEeecc---CCCccEEEEEEEEEeCCCCCc
Confidence 999999999999987642 223345778999999999996
No 3
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=8.2e-43 Score=340.51 Aligned_cols=163 Identities=33% Similarity=0.402 Sum_probs=136.2
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| .++++|||||++++||+.++..... .+...|.|++||+|||||+|+|||..
T Consensus 143 YGQTGSGKTyTM~G------~~~~~GIipr~~~~lF~~i~~~~~~-----~~~~~~~V~vS~lEIYnE~i~DLL~~---- 207 (443)
T 2owm_A 143 YGQTGSGKSYTMMG------TPDQPGLIPRTCEDLFQRIASAQDE-----TPNISYNVKVSYFEVYNEHVRDLLAP---- 207 (443)
T ss_dssp ESSTTSSHHHHHTC------CTTSCCHHHHHHHHHHHHHHHTTTT-----STTCEEEEEEEEEEEETTEEEETTSC----
T ss_pred eCCCCCCCCEEeec------CCCCCchHHHHHHHHHHHHHhhhcc-----cCCceEEEEEEEEEEECCEeeEccCc----
Confidence 99999999999999 5678999999999999999875321 24679999999999999999888731
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 208 -------------------------------------------------------------------------------- 207 (443)
T 2owm_A 208 -------------------------------------------------------------------------------- 207 (443)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
... ..+...|+|+|++.+++||+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 208 --------------------~~~---~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~ 264 (443)
T 2owm_A 208 --------------------VVP---NKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDT 264 (443)
T ss_dssp --------------------CCS---SCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCB
T ss_pred --------------------ccc---CCcccccceeECCCCCEeccCCEEEEcCCHHHHHHHHHHHHhhCCcccCcCCCc
Confidence 100 011457999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+...... ........++|+||||||||+
T Consensus 265 SSRSH~Ifti~v~~~~~~~~-~~~~~~~~skL~lVDLAGSER 305 (443)
T 2owm_A 265 SSRSHAVFTIMLKQIHHDLE-TDDTTERSSRIRLVDLAGSER 305 (443)
T ss_dssp CTTEEEEEEEEEEEEC--------CCEEEEEEEEEECCCCCC
T ss_pred cCCCeEEEEEEEEEeecccC-CCCcceEEEEEEEEECCCCcc
Confidence 99999999999998653211 122345678999999999996
No 4
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=3.4e-43 Score=333.41 Aligned_cols=163 Identities=29% Similarity=0.447 Sum_probs=127.3
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|........+++|||||++++||+.+++. ...+|.|++||+|||||+|+|||.
T Consensus 90 YGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~---------~~~~~~v~vS~~EIYnE~i~DLL~----- 155 (344)
T 4a14_A 90 YGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDEN---------DLLDCLVHVSYLEVYKEEFRDLLE----- 155 (344)
T ss_dssp ESSTTSSHHHHHCC--------CCCCHHHHHHHHHHHHHHHC---------TTSEEEEEEEEEEEETTEEEETTS-----
T ss_pred ecccCCCceEeecccchhhhhhcccCCchHHHHHHHHhcccc---------cceeeEEEEehhhhhHHHHHHHHH-----
Confidence 999999999999986433334678999999999999999864 257999999999999999988773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 156 -------------------------------------------------------------------------------- 155 (344)
T 4a14_A 156 -------------------------------------------------------------------------------- 155 (344)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+... ...|+|+|+++++++|+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 156 -------------------~~~~------~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 210 (344)
T 4a14_A 156 -------------------VGTA------SRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHL 210 (344)
T ss_dssp -------------------SCCC------GGGCEEEECTTSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CC
T ss_pred -------------------hccc------cccceeeeccCCCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhc
Confidence 1111 457899999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccC---CCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVE---DPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~---~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|++....... ...+....++|+||||||||+
T Consensus 211 SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr 255 (344)
T 4a14_A 211 SSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSER 255 (344)
T ss_dssp GGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCC
T ss_pred ccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchh
Confidence 999999999999997543221 123456778999999999996
No 5
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=4.8e-43 Score=333.69 Aligned_cols=153 Identities=29% Similarity=0.405 Sum_probs=130.8
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| ..+++|||||++.+||+.+++... ...|.|.+||+|||||+|+|||.
T Consensus 112 YGqTGSGKTyTm~G------~~~~~Giipr~~~~lf~~i~~~~~--------~~~~~v~vS~~EIYnE~i~DLL~----- 172 (355)
T 3lre_A 112 YGATGAGKTHTMLG------SADEPGVMYLTMLHLYKCMDEIKE--------EKICSTAVSYLEVYNEQIRDLLV----- 172 (355)
T ss_dssp ECCTTSSHHHHHTB------CSSSBCHHHHHHHHHHHHHHHTTT--------TEEEEEEEEEEEEETTEEEESSS-----
T ss_pred eCCCCCCceeeecc------CCCCCCeeehhhhHHHHhhhhhcc--------CceEEEEEEEEEEECCEEEECcC-----
Confidence 99999999999999 567889999999999999987643 45799999999999999977772
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 173 -------------------------------------------------------------------------------- 172 (355)
T 3lre_A 173 -------------------------------------------------------------------------------- 172 (355)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+ ..+|+|+|++.++++|+||+++.|.+++|++++|..|..+|++++|.||+.
T Consensus 173 -------------------~---------~~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 224 (355)
T 3lre_A 173 -------------------N---------SGPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNAT 224 (355)
T ss_dssp -------------------C---------CCCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CB
T ss_pred -------------------C---------CCCceeEEcCCCCEEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCcCC
Confidence 1 346899999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+..... ........++|+||||||||+
T Consensus 225 SSRSH~if~i~v~~~~~~~--~~~~~~~~skl~lVDLAGSEr 264 (355)
T 3lre_A 225 SSRSHAVFQIYLRQQDKTA--SINQNVRIAKMSLIDLAGSER 264 (355)
T ss_dssp CTTCEEEEEEEEEEEETTS--CTTCCCCCEEEEEEECCCCCC
T ss_pred CCCCcEEEEEEEEEecCCC--CCCCCEEEEEEEEEECCCCCc
Confidence 9999999999999976432 223345678999999999996
No 6
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=5.3e-43 Score=329.90 Aligned_cols=154 Identities=32% Similarity=0.489 Sum_probs=136.2
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|... +++..|||||++++||+.+.... ....|.|++||+|||||+|+|||.
T Consensus 84 YGqTGSGKTyTm~G~~~---~~~~~Giipr~~~~lF~~i~~~~--------~~~~~~v~vS~~EIYnE~v~DLL~----- 147 (325)
T 1bg2_A 84 YGQTSSGKTHTMEGKLH---DPEGMGIIPRIVQDIFNYIYSMD--------ENLEFHIKVSYFEIYLDKIRDLLD----- 147 (325)
T ss_dssp ECSTTSSHHHHHTBSTT---CTTTBCHHHHHHHHHHHHHHHHC--------SSEEEEEEEEEEEEETTEEEESSC-----
T ss_pred ECCCCCCCceEecccCC---CcccCccHHHHHHHHHHHHHhcc--------CCceEEEEEEEEEEecCeeeeccc-----
Confidence 99999999999999543 45678999999999999998753 257899999999999999977762
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 148 -------------------------------------------------------------------------------- 147 (325)
T 1bg2_A 148 -------------------------------------------------------------------------------- 147 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+. ..+|+|+|+++++++|+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 148 -------------------~~--------~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 200 (325)
T 1bg2_A 148 -------------------VS--------KTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEH 200 (325)
T ss_dssp -------------------TT--------CCSBCEEECTTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHH
T ss_pred -------------------CC--------CCCceEEECCCCCEEecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCC
Confidence 21 456899999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 201 SSRSH~if~i~v~~~~~-----~~~~~~~skl~lVDLAGSEr 237 (325)
T 1bg2_A 201 SSRSHSIFLINVKQENT-----QTEQKLSGKLYLVDLAGSEK 237 (325)
T ss_dssp HHHSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCSCC
T ss_pred CCCCeEEEEEEEEEEec-----CCCcEEEEEEEEEECCCCCc
Confidence 99999999999998763 23445678999999999996
No 7
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=328.12 Aligned_cols=154 Identities=32% Similarity=0.381 Sum_probs=133.8
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| ..+++|||||++++||+.+++.. ....|.|++||+|||||+|+|||.
T Consensus 87 YGqTGSGKTyTm~G------~~~~~Giipr~~~~lF~~i~~~~--------~~~~~~v~vS~~EIYnE~i~DLL~----- 147 (330)
T 2h58_A 87 YGQTGAGKTYTMEG------TAENPGINQRALQLLFSEVQEKA--------SDWEYTITVSAAEIYNEVLRDLLG----- 147 (330)
T ss_dssp ESSTTSSHHHHHTB------CSSSBCHHHHHHHHHHHHHHTSC--------TTEEEEEEEEEEEEETTEEEETTS-----
T ss_pred ECCCCCCCcEEEec------CCCCCcHHHHHHHHHHHhhhccc--------CCceEEEEEEEEEEECCChhhccc-----
Confidence 99999999999999 56789999999999999997642 256899999999999999988873
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 148 -------------------------------------------------------------------------------- 147 (330)
T 2h58_A 148 -------------------------------------------------------------------------------- 147 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+.+. ....++++++++++++|+||+++.|.|++|++++|..|..+|++++|.||++
T Consensus 148 -------------------~~~~-----~~l~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 203 (330)
T 2h58_A 148 -------------------KEPQ-----EKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEH 203 (330)
T ss_dssp -------------------CSSC-----CCCCCEECTTSSCCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSC
T ss_pred -------------------cccc-----ccceEEEeecCCCCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCC
Confidence 1110 0334566678889999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 204 SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr 240 (330)
T 2h58_A 204 SSRSHALLIVTVRGVDC-----STGLRTTGKLNLVDLAGSER 240 (330)
T ss_dssp GGGSEEEEEEEEEEEET-----TTTEEEEEEEEEEECCCCCC
T ss_pred cCCccEEEEEEEEEEec-----CCCcEEEEEEEEEeCCCCCc
Confidence 99999999999998763 34566788999999999996
No 8
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=1.9e-42 Score=330.99 Aligned_cols=154 Identities=30% Similarity=0.379 Sum_probs=136.5
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| .++++|||||++++||+.++.... ...|.|++||+|||||+|+|||.
T Consensus 86 YGqTGSGKTyTM~G------~~~~~Giipr~~~~lF~~i~~~~~--------~~~~~v~vS~~EIYnE~i~DLL~----- 146 (369)
T 3cob_A 86 YGQTGSGKTFTIYG------ADSNPGLTPRAMSELFRIMKKDSN--------KFSFSLKAYMVELYQDTLVDLLL----- 146 (369)
T ss_dssp EECTTSSHHHHHTB------CSSSBCHHHHHHHHHHHHHHHTTT--------TEEEEEEEEEEEECSSCEEESSC-----
T ss_pred ECCCCCCCeEeecC------CCCCCchhHHHHHHHHHHHHhhcc--------CceeEEEEEEEEEeCceeeecCC-----
Confidence 99999999999999 567899999999999999987532 36899999999999999977773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 147 -------------------------------------------------------------------------------- 146 (369)
T 3cob_A 147 -------------------------------------------------------------------------------- 146 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+... ....|.|+++++++++|+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 147 -------------------~~~~-----~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 202 (369)
T 3cob_A 147 -------------------PKQA-----KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQ 202 (369)
T ss_dssp -------------------CSSS-----CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCH
T ss_pred -------------------Cccc-----CCcceEEEECCCCCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCC
Confidence 2111 0467999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 203 SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr 239 (369)
T 3cob_A 203 SSRSHLIVSVIIESTNL-----QTQAIARGKLSFVDLAGSER 239 (369)
T ss_dssp HHHSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCSSC
T ss_pred CCcceEEEEEEEEEecC-----CCCcEEEEEEEEEeCCCCCc
Confidence 99999999999998764 33456788999999999996
No 9
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=6e-43 Score=334.23 Aligned_cols=159 Identities=30% Similarity=0.382 Sum_probs=135.8
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|.. ..+++|||||++++||+.++.... ....|.|++||+|||||+|+|||.
T Consensus 96 YGqTGSGKTyTm~G~~----~~~~~Giipr~~~~lF~~i~~~~~-------~~~~~~v~vS~~EIYnE~v~DLL~----- 159 (366)
T 2zfi_A 96 YGQTGAGKSYTMMGKQ----EKDQQGIIPQLCEDLFSRINDTTN-------DNMSYSVEVSYMEIYCERVRDLLN----- 159 (366)
T ss_dssp ECSTTSSHHHHHTBCS----GGGCBCHHHHHHHHHHHHHHTCCC-------TTEEEEEEEEEEEEETTEEEETTC-----
T ss_pred eCCCCCCCceEeeCCC----ccCCCccHHHHHHHHHHHHhhccc-------CCeeEEEEEEEEEeeCCeEEEccc-----
Confidence 9999999999999953 246789999999999999976421 256899999999999999977773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 160 -------------------------------------------------------------------------------- 159 (366)
T 2zfi_A 160 -------------------------------------------------------------------------------- 159 (366)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+.. ...|+|+|++.+++||+||+++.|.|++|++++|..|..+|++++|.||++
T Consensus 160 -------------------~~~-------~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~ 213 (366)
T 2zfi_A 160 -------------------PKN-------KGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNET 213 (366)
T ss_dssp -------------------TTT-------CSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTH
T ss_pred -------------------ccc-------CCCceEEEcCCCCEEEeCCEEEEECCHHHHHHHHHHHhhccccccccCCCC
Confidence 211 456899999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+....... .......++|+||||||||+
T Consensus 214 SSRSH~if~i~v~~~~~~~~~-~~~~~~~skL~lVDLAGSEr 254 (366)
T 2zfi_A 214 SSRSHAVFNIIFTQKRHDAET-NITTEKVSKISLVDLAGSER 254 (366)
T ss_dssp HHHSEEEEEEEEEEEEECTTT-TCEEEEEEEEEEEECCCGGG
T ss_pred CCcceEEEEEEEEEecccCCC-CccceeEeEEEEEeCCCCcc
Confidence 999999999999987642211 12234678999999999996
No 10
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=333.03 Aligned_cols=155 Identities=30% Similarity=0.398 Sum_probs=124.5
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| .++++|||||++.+||+.++.... ......|.|++||+|||||+|+|||.
T Consensus 105 YGqTGSGKTyTM~G------~~~~~Giipra~~~lF~~i~~~~~-----~~~~~~~~V~vS~lEIYnE~i~DLL~----- 168 (388)
T 3bfn_A 105 YGPTGAGKTHTMLG------SPEQPGVIPRALMDLLQLTREEGA-----EGRPWALSVTMSYLEIYQEKVLDLLD----- 168 (388)
T ss_dssp ESCTTSSHHHHHTB------CSSSBCHHHHHHHHHHHHHHHHTS-----TTCSEEEEEEEEEEEEETTEEEESSS-----
T ss_pred ecCCCCCCCeEeec------CccccchhHHHHHHHHHHHHHhhc-----cCCCceEEEEEEEEEEECCeeeehhc-----
Confidence 99999999999999 567899999999999999987432 12356899999999999999977763
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 169 -------------------------------------------------------------------------------- 168 (388)
T 3bfn_A 169 -------------------------------------------------------------------------------- 168 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+. ...|.|+|++.++++|+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 169 -------------------~~--------~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~ 221 (388)
T 3bfn_A 169 -------------------PA--------SGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQR 221 (388)
T ss_dssp -------------------CS--------SCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------C
T ss_pred -------------------cC--------CCCceEEEcCCCCEEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCC
Confidence 22 346889999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+.... .......++|+||||||||+
T Consensus 222 SSRSH~If~i~v~~~~~~----~~~~~~~skL~lVDLAGSEr 259 (388)
T 3bfn_A 222 SSRSHAVLLVKVDQRERL----APFRQREGKLYLIDLAGSED 259 (388)
T ss_dssp GGGSEEEEEEEEEEEESS----TTCCEEEEEEEEEECCCTTC
T ss_pred CCCCeEEEEEEEEEeccC----CCCceeEEEEEEEECCCCcc
Confidence 999999999999987642 22345678999999999996
No 11
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=8.8e-43 Score=331.78 Aligned_cols=159 Identities=31% Similarity=0.419 Sum_probs=118.5
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| ..+++|||||++++||..++.... ....|.|++||+|||||+|+|||.
T Consensus 99 YGqTGSGKTyTm~G------~~~~~Giipr~~~~lF~~i~~~~~-------~~~~~~v~vS~~EIYnE~i~DLL~----- 160 (354)
T 3gbj_A 99 YGQTGSGKSYTMMG------TADQPGLIPRLCSGLFERTQKEEN-------EEQSFKVEVSYMEIYNEKVRDLLD----- 160 (354)
T ss_dssp EECTTSSHHHHHTB------CSSSBCHHHHHHHHHHHHHHHHCB-------TTEEEEEEEEEEEEETTEEEETTC-----
T ss_pred eCCCCCCCceEEec------CCCCCchhhHHHHHHHHHHHhhcc-------cccceeeeceeEEEecCeeeEccC-----
Confidence 99999999999999 567889999999999999976432 256899999999999999988873
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 161 -------------------------------------------------------------------------------- 160 (354)
T 3gbj_A 161 -------------------------------------------------------------------------------- 160 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+... ...|+|+|++.+++||+||+++.|.+++|++++|..|..+|++++|.||+.
T Consensus 161 -------------------~~~~------~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 215 (354)
T 3gbj_A 161 -------------------PKGS------RQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEE 215 (354)
T ss_dssp -------------------------------CBCBC------CCBTTCCCEEECSHHHHHHHHHHHHHCC----------
T ss_pred -------------------CCCC------CcceEEEEcCCCCEEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCCCC
Confidence 1111 456889999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcCc
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSASE 283 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~~ 283 (286)
|||||+||+|+|.+..... .........++|+||||||||+.
T Consensus 216 SSRSH~if~i~v~~~~~~~-~~~~~~~~~skL~lVDLAGSEr~ 257 (354)
T 3gbj_A 216 SSRSHAVFKITLTHTLYDV-KSGTSGEKVGKLSLVDLAGSERA 257 (354)
T ss_dssp CTTSEEEEEEEEEEEEECT-TSCEEEEEEEEEEEEECCCCCCC
T ss_pred CCcccEEEEEEEEEEeccc-CCCCCCeeEEEEEEEECCCCCch
Confidence 9999999999999865321 11223346789999999999963
No 12
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=1.2e-42 Score=333.93 Aligned_cols=152 Identities=28% Similarity=0.345 Sum_probs=118.1
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|+..+.....++|||||++++||..++..... ...|.|++||+|||||+|+|||.
T Consensus 141 YGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~-------~~~~~V~vS~~EIYnE~v~DLL~----- 208 (387)
T 2heh_A 141 YGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYR-------KLGLEVYVTFFEIYNGKLFDLLN----- 208 (387)
T ss_dssp ESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHH-------TTTCEEEEEEEEEETTEEEETTT-----
T ss_pred ecCCCCCCCeEeccCCCCCCcccCCceehhhHHHHHHHhhccccc-------CceEEEEEEEEEecCCeEEECCC-----
Confidence 999999999999996544444578999999999999998765432 56899999999999999977773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 209 -------------------------------------------------------------------------------- 208 (387)
T 2heh_A 209 -------------------------------------------------------------------------------- 208 (387)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+ ...|+|+||++++++|+||+++.|.|++|++++|..|..+|++++|.||++
T Consensus 209 -------------------~---------~~~l~i~ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~ 260 (387)
T 2heh_A 209 -------------------K---------KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSN 260 (387)
T ss_dssp -------------------T---------TEECEEEECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------C
T ss_pred -------------------C---------CccceEEEcCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCC
Confidence 1 345889999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+.. ...++|+||||||||+
T Consensus 261 SSRSH~Ifti~v~~~~----------~~~skL~lVDLAGSER 292 (387)
T 2heh_A 261 SSRSHACFQIILRAKG----------RMHGKFSLVDLAGNER 292 (387)
T ss_dssp GGGSEEEEEEEEESSS----------SEEEEEEEEECCCCC-
T ss_pred cccceEEEEEEEEECC----------eeeeEEEEEECCCCcc
Confidence 9999999999998641 2567999999999996
No 13
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=1.9e-42 Score=334.70 Aligned_cols=152 Identities=29% Similarity=0.340 Sum_probs=124.7
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|+..+.....+.|||||++.+||..++..... ...|.|++||+|||||+|+|||.
T Consensus 161 YGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~-------~~~~~V~vS~lEIYnE~i~DLL~----- 228 (410)
T 1v8k_A 161 YGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYR-------NLNLEVYVTFFEIYNGKVFDLLN----- 228 (410)
T ss_dssp EESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHH-------TTCCEEEEEEEEEETTEEEETTT-----
T ss_pred ecCCCCCCCeEeecCCCCCCccccCcchhhhHHHHHHHHhhhccc-------CccEEEEEEEEEeeCCEEEECCC-----
Confidence 999999999999996544445678999999999999998764432 56899999999999999977773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 229 -------------------------------------------------------------------------------- 228 (410)
T 1v8k_A 229 -------------------------------------------------------------------------------- 228 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+ ...|+|+||+.++++|.||+++.|.|++|++++|..|..+|++++|.||++
T Consensus 229 -------------------~---------~~~l~i~ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~ 280 (410)
T 1v8k_A 229 -------------------K---------KAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSN 280 (410)
T ss_dssp -------------------T---------TEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------C
T ss_pred -------------------C---------CCCceEEECCCCCeEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCC
Confidence 1 346899999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|.|.+.. ...++|+||||||||.
T Consensus 281 SSRSH~Ifti~v~~~~----------~~~skL~lVDLAGSER 312 (410)
T 1v8k_A 281 SSRSHACFQILLRTKG----------RLHGKFSLVDLAGNER 312 (410)
T ss_dssp CCSSEEEEEEEEESSS----------SEEEEEEEEECCCCCC
T ss_pred CCCceEEEEEEEEeCC----------cceeEEEEEECCCccc
Confidence 9999999999998641 2567999999999996
No 14
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=1.8e-42 Score=330.85 Aligned_cols=154 Identities=31% Similarity=0.469 Sum_probs=136.0
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|..+ ++...|||||++++||+.+.... ....|.|++||+|||||+|+|||.
T Consensus 91 YGqTGSGKTyTm~G~~~---~~~~~Giipr~~~~lF~~i~~~~--------~~~~~~v~vS~~EIYnE~i~DLL~----- 154 (365)
T 2y65_A 91 YGQTSSGKTHTMEGVIG---DSVKQGIIPRIVNDIFNHIYAME--------VNLEFHIKVSYYEIYMDKIRDLLD----- 154 (365)
T ss_dssp ECSTTSSHHHHHTBSTT---CTTTBCHHHHHHHHHHHHHHHCC--------SCEEEEEEEEEEEEETTEEEETTC-----
T ss_pred ecCCCCCCceEEecCCC---CcccCChHHHHHHHHHHHHHhcc--------CCceEEEEEEEEEEECCeeeeccc-----
Confidence 99999999999998543 45678999999999999997642 256899999999999999977772
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 155 -------------------------------------------------------------------------------- 154 (365)
T 2y65_A 155 -------------------------------------------------------------------------------- 154 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+. ..+|.|+|++.+++||+||+++.|.|++|++++|..|..+|++++|.||++
T Consensus 155 -------------------~~--------~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~ 207 (365)
T 2y65_A 155 -------------------VS--------KVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEH 207 (365)
T ss_dssp -------------------TT--------CCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHH
T ss_pred -------------------CC--------cCCceEEECCCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCC
Confidence 21 456899999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 208 SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr 244 (365)
T 2y65_A 208 SSRSHSVFLINVKQENL-----ENQKKLSGKLYLVDLAGSEK 244 (365)
T ss_dssp HHTSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCC
T ss_pred CCCceEEEEEEEEEEec-----CCCCEeEEEEEEEECCCCCc
Confidence 99999999999998764 23445678999999999996
No 15
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=1.4e-42 Score=332.11 Aligned_cols=157 Identities=32% Similarity=0.456 Sum_probs=135.1
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|... .+++.|||||++++||..++.. ....|.|++||+|||||+|+|||.
T Consensus 108 YGqTGSGKTyTM~G~~~---~~~~~Giipr~~~~lF~~i~~~---------~~~~~~v~vS~~EIYnE~i~DLL~----- 170 (372)
T 3b6u_A 108 YGQTGTGKTYTMEGIRG---DPEKRGVIPNSFDHIFTHISRS---------QNQQYLVRASYLEIYQEEIRDLLS----- 170 (372)
T ss_dssp EESTTSSHHHHHTBCTT---SGGGBCHHHHHHHHHHHHHHTC---------SSCEEEEEEEEEEEETTEEEETTS-----
T ss_pred ecCCCCCCCEeEecCCC---CcccCCcHHHHHHHHHHHhhhc---------cCCceEEEEEEEEEeCCEEEECCC-----
Confidence 99999999999998532 3567899999999999999763 267999999999999999977773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 171 -------------------------------------------------------------------------------- 170 (372)
T 3b6u_A 171 -------------------------------------------------------------------------------- 170 (372)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+.. ...|+|+|++++++||+||+++.|.|++|++++|..|..+|++++|.||++
T Consensus 171 -------------------~~~-------~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 224 (372)
T 3b6u_A 171 -------------------KDQ-------TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEH 224 (372)
T ss_dssp -------------------SCT-------TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHH
T ss_pred -------------------CCC-------CCCceEEECCCCcEecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCC
Confidence 211 456899999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+..... +....+..++|+||||||||+
T Consensus 225 SSRSH~If~i~v~~~~~~~--~~~~~~~~skL~lVDLAGSEr 264 (372)
T 3b6u_A 225 SSRSHAIFVITIECSEVGL--DGENHIRVGKLNLVDLAGSER 264 (372)
T ss_dssp HHTSEEEEEEEEEEEC-------CCCEEEEEEEEEECCCCCE
T ss_pred CCcceEEEEEEEEEeecCC--CCCcceEEEEEEEEECCCCcc
Confidence 9999999999999865421 223456788999999999996
No 16
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=3.2e-42 Score=328.03 Aligned_cols=155 Identities=34% Similarity=0.514 Sum_probs=136.1
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|... ..++++|||||++++||+.+.... ....|.|++||+|||||+|+|||.
T Consensus 87 YGqTGSGKTyTm~G~~~--~~~~~~Giipr~~~~lF~~i~~~~--------~~~~~~v~vS~~EIYnE~i~DLL~----- 151 (355)
T 1goj_A 87 YGQTGAGKSYTMMGTSI--DDPDGRGVIPRIVEQIFTSILSSA--------ANIEYTVRVSYMEIYMERIRDLLA----- 151 (355)
T ss_dssp ECSTTSSHHHHHTBSCT--TSTTTBCHHHHHHHHHHHHHHTSC--------TTEEEEEEEEEEEEETTEEEETTS-----
T ss_pred ECCCCCCcceEeecCCC--CCcccCCchHHHHHHHHHHHHhcc--------cCceEEEEEEEEEEECCEEEEccc-----
Confidence 99999999999998531 135778999999999999997642 256899999999999999977773
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 152 -------------------------------------------------------------------------------- 151 (355)
T 1goj_A 152 -------------------------------------------------------------------------------- 151 (355)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+. ...|.|+|++++++||+||+++.|.|++|++++|..|..+|++++|.||++
T Consensus 152 -------------------~~--------~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 204 (355)
T 1goj_A 152 -------------------PQ--------NDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQE 204 (355)
T ss_dssp -------------------TT--------CCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred -------------------Cc--------cCCceeEEcCCCCEeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCC
Confidence 21 346889999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 205 SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr 241 (355)
T 1goj_A 205 SSRSHSIFVITITQKNV-----ETGSAKSGQLFLVDLAGSEK 241 (355)
T ss_dssp GGGCEEEEEEEEEEEET-----TTTEEEEEEEEEEECCCCSC
T ss_pred CCCceEEEEEEEEEecc-----CCCceeeeEEEEEECCCCCc
Confidence 99999999999998764 33556788999999999996
No 17
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=3.3e-42 Score=328.24 Aligned_cols=160 Identities=29% Similarity=0.400 Sum_probs=131.8
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|+.+ ..+++|||||++++||+.+++.. ...|.|++||+|||||+|+|||..
T Consensus 110 YGqTGSGKTyTM~G~~~---~~~~~Giipra~~~lF~~i~~~~---------~~~~~v~vS~~EIYnE~i~DLL~~---- 173 (358)
T 2nr8_A 110 YGQTGAGKTYTMMGATE---NYKHRGILPRALQQVFRMIEERP---------THAITVRVSYLEIYNESLFDLLST---- 173 (358)
T ss_dssp EESTTSSHHHHHTBCSS---CGGGBCHHHHHHHHHHHHHHTCT---------TSCEEEEEEEEEEETTEEEETTSS----
T ss_pred ECCCCCCCceEeccccc---ccccCCcHHHHHHHHHHHHhhcC---------CceEEEEEEEEEEeCCeeeECcCC----
Confidence 99999999999999532 23468999999999999998742 468999999999999999988842
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 174 -------------------------------------------------------------------------------- 173 (358)
T 2nr8_A 174 -------------------------------------------------------------------------------- 173 (358)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
.+.. .....++.|+|++ .+++|+||+++.|.+++|++++|..|..+|++++|.||+.
T Consensus 174 --------------------~~~~--~~~~~~l~i~e~~-~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 230 (358)
T 2nr8_A 174 --------------------LPYV--GPSVTPMTIVENP-QGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKN 230 (358)
T ss_dssp --------------------STTS--CTTTSCCEEEEET-TEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred --------------------cccc--CccCCceEEEECC-CceEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCC
Confidence 0000 0015678999999 7899999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|++.... ...+....++|+||||||||+
T Consensus 231 SSRSH~If~i~v~~~~~~---~~~~~~~~skL~lVDLAGSEr 269 (358)
T 2nr8_A 231 SSRSHCIFTIYLEAHSRT---LSEEKYITSKINLVDLAGSER 269 (358)
T ss_dssp GGGCEEEEEEEEEEC----------CCEEEEEEEEECCCCC-
T ss_pred CCcCeEEEEEEEEEEecc---CCCCCEEEEEEEEEECCCCCc
Confidence 999999999999986532 223445678999999999996
No 18
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=324.75 Aligned_cols=161 Identities=31% Similarity=0.370 Sum_probs=127.9
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|+... .++++|||||++++||+.++..... ...|.|++||+|||||+|+|||..
T Consensus 122 YGqTGSGKTyTM~G~~~~--~~~~~Giipr~~~~lF~~i~~~~~~-------~~~~~v~vS~~EIYnE~i~DLL~~---- 188 (376)
T 2rep_A 122 YGQTGSGKTFTMEGGPGG--DPQLEGLIPRALRHLFSVAQELSGQ-------GWTYSFVASYVEIYNETVRDLLAT---- 188 (376)
T ss_dssp ECSTTSSHHHHHTBCSSC--CGGGBCHHHHHHHHHHHHHHHGGGG-------TEEEEEEEEEEEEETTEEEETTCC----
T ss_pred eCCCCCCCceEeecCCCC--CcccCCcHHHHHHHHHHHHHHhhcC-------CeEEEEEEEEEEEECCEeeEcccc----
Confidence 999999999999995421 3467899999999999999876432 568999999999999999888841
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 189 -------------------------------------------------------------------------------- 188 (376)
T 2rep_A 189 -------------------------------------------------------------------------------- 188 (376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEc--CCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHED--SGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMN 238 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~--~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N 238 (286)
.... .....++|+++ +.++++|+||+++.|.+++|++++|..|.++|++++|.||
T Consensus 189 --------------------~~~~---~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N 245 (376)
T 2rep_A 189 --------------------GTRK---GQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQN 245 (376)
T ss_dssp --------------------C-----------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC----
T ss_pred --------------------cccc---ccCCCceEEeccCCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhcccccccCC
Confidence 0000 00356788888 5789999999999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 239 SQSSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 239 ~~SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
++|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 246 ~~SSRSH~Ifti~v~~~~~-----~~~~~~~skL~lVDLAGSEr 284 (376)
T 2rep_A 246 ERSSRSHSVFQLQISGEHS-----SRGLQCGAPLSLVDLAGSER 284 (376)
T ss_dssp -CGGGSEEEEEEEEEEEES-----SSCCEEEEEEEEEECCCCC-
T ss_pred CCCCCceEEEEEEEEEEec-----CCCcEEEeEEEEEECCCCcc
Confidence 9999999999999998763 23445678999999999996
No 19
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-42 Score=326.50 Aligned_cols=160 Identities=29% Similarity=0.406 Sum_probs=130.9
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|+.. +.+++|||||++++||+.++... ...|.|++||+|||||+|+|||..
T Consensus 111 YGQTGSGKTyTM~G~~~---~~~~~Giipra~~~lF~~~~~~~---------~~~~~v~vS~~EIYnE~i~DLL~~---- 174 (359)
T 3nwn_A 111 YGQTGAGKTYTMMGATE---NYKHRGILPRALQQVFRMIEERP---------THAITVRVSYLEIYNESLFDLLST---- 174 (359)
T ss_dssp EESTTSSHHHHHTBCSS---CGGGBCHHHHHHHHHHHHHHTCT---------TSCEEEEEEEEEEETTEEEETTSS----
T ss_pred eCCCCCCccEEeCCccC---CccchhhHHHHHHHHHHHhhcCC---------CCcEEEEEEEEEEecccccccccc----
Confidence 99999999999999543 34678999999999999887642 568999999999999999999842
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 175 -------------------------------------------------------------------------------- 174 (359)
T 3nwn_A 175 -------------------------------------------------------------------------------- 174 (359)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
... .......+.+++++ .+++|+|++++.|.+++|++++|..|..+|++++|.||.+
T Consensus 175 --------------------~~~--~~~~~~~~~~~~~~-~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 231 (359)
T 3nwn_A 175 --------------------LPY--VGPSVTPMTIVENP-QGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKN 231 (359)
T ss_dssp --------------------STT--SCTTTSCCEEEEET-TEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred --------------------ccc--cccccccceEEecC-CceEEeccEEEEecCHHHHHHHHHhhhhhcccccccCccc
Confidence 000 00014567788887 5799999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+.... ...+....++|+||||||||+
T Consensus 232 SSRSH~if~i~i~~~~~~---~~~~~~~~skL~lVDLAGSEr 270 (359)
T 3nwn_A 232 SSRSHCIFTIYLEAHSRT---LSEEKYITSKINLVDLAGSER 270 (359)
T ss_dssp GGGCEEEEEEEEEEC----------CCEEEEEEEEECCCCC-
T ss_pred cCcceEEEEEEEEeeccc---ccCcccccccceeeecccccc
Confidence 999999999999886542 233445678999999999996
No 20
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=2.6e-41 Score=323.69 Aligned_cols=159 Identities=33% Similarity=0.469 Sum_probs=131.8
Q ss_pred CCCCccccccccccccCCC-----CCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccch
Q psy15014 1 MLQTGSGKTYTMGTGFETD-----VSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEH 75 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~-----~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~ 75 (286)
||||||||||||+|..... ....++|||||++++||+.++.. ...|.|++||+|||||+|+|||.
T Consensus 107 YGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~----------~~~~~v~vS~~EIYnE~i~DLL~ 176 (373)
T 2wbe_C 107 YGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMM----------EVEYTMRISYLELYNEELCDLLS 176 (373)
T ss_dssp ECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHC----------CSCEEEEEEEEEEETTEEEESSC
T ss_pred ecCCCCCcceecccCccccccccccccCCCcChHHHHHHHHHHHHhc----------CceEEEEEEEEEEeCCeEEECCC
Confidence 9999999999999965321 23468899999999999998764 46899999999999999988773
Q ss_pred hhhccccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhh
Q psy15014 76 ITCVQAHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEE 155 (286)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 155 (286)
T Consensus 177 -------------------------------------------------------------------------------- 176 (373)
T 2wbe_C 177 -------------------------------------------------------------------------------- 176 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHhhhcccCCCccccccccCCCCCccccccCCCCceEEEcC--CCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcc
Q psy15014 156 ERDKVLASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDS--GHSIYVTGATSKSIRSAQEAMNALRQGALSRTTA 233 (286)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~--~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~ 233 (286)
+.. ...+++++++ +++++|+||+++.|.+++|++++|..|..+|+++
T Consensus 177 ------------------------~~~-------~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~ 225 (373)
T 2wbe_C 177 ------------------------TDD-------TTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTA 225 (373)
T ss_dssp ------------------------TTS-------CSCCCEEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTT
T ss_pred ------------------------CCC-------CCCceeEeccCCCCcEEecCceEEccCCHHHHHHHHHHHhhhhccc
Confidence 111 3457788874 5789999999999999999999999999999999
Q ss_pred cCCCCCCCCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 234 STQMNSQSSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 234 sT~~N~~SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
+|.||++|||||+||+|+|.+.... .........++|+||||||||+
T Consensus 226 ~T~~N~~SSRSH~if~i~v~~~~~~--~~~~~~~~~skL~lVDLAGSEr 272 (373)
T 2wbe_C 226 TTLMNAQSSRSHTVFSIVVHIRENG--IEGEDMLKIGKLNLVDLAGSEN 272 (373)
T ss_dssp CSCHHHHHHHSEEEEEEEEEECTTC--TTTCCEEEEEEEEEEECCCC--
T ss_pred cccCCCCCCCccEEEEEEEEEecCC--CCCCcceeEEEEEEEECCCCCc
Confidence 9999999999999999999875421 1222345678999999999996
No 21
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=1.4e-41 Score=324.14 Aligned_cols=152 Identities=22% Similarity=0.249 Sum_probs=124.5
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|.... ...+++|||||++++||..++.... ...+.|++||+|||||+|+|||.
T Consensus 91 YGqTGSGKTyTM~G~~~~-~~~~~~Giipr~~~~lF~~i~~~~~--------~~~~~v~vS~~EIYnE~v~DLL~----- 156 (360)
T 1ry6_A 91 YGQTGSGKTYTMLGSQPY-GQSDTPGIFQYAAGDIFTFLNIYDK--------DNTKGIFISFYEIYCGKLYDLLQ----- 156 (360)
T ss_dssp ECCTTSSHHHHHHBSSST-TTSSCBCHHHHHHHHHHHHHHHHCS--------SSCEEEEEEEEEEETTEEEESCC-----
T ss_pred eCCCCCCCCEEEecCCCC-CCccCCCcHHHHHHHHHHHHHhhcc--------CCceEEEEEEEEeeCCeeEEccc-----
Confidence 999999999999985321 2357899999999999999987532 56899999999999999988873
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 157 -------------------------------------------------------------------------------- 156 (360)
T 1ry6_A 157 -------------------------------------------------------------------------------- 156 (360)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+ ...+.+++++.++++|+||+++.|.+++|++++|..|..+|++++|.||+.
T Consensus 157 -------------------~---------~~~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~ 208 (360)
T 1ry6_A 157 -------------------K---------RKMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDE 208 (360)
T ss_dssp -------------------C--------------------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTG
T ss_pred -------------------C---------CccceeeEcCCCCEEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCC
Confidence 1 233567788899999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+.. .....++|+||||||||.
T Consensus 209 SSRSH~if~i~v~~~~--------~~~~~skL~lVDLAGSEr 242 (360)
T 1ry6_A 209 SSRSHAILNIDLKDIN--------KNTSLGKIAFIDLAGSER 242 (360)
T ss_dssp GGGSEEEEEEEEEETT--------TTEEEEEEEEEECCCTTG
T ss_pred CccceEEEEEEEEecc--------CCcceeEEEEEECCCCcc
Confidence 9999999999998732 235678999999999996
No 22
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=5.7e-41 Score=318.75 Aligned_cols=161 Identities=32% Similarity=0.451 Sum_probs=119.3
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|. +.|||||++++||+.++..... ...|.|++||+|||||+|+|||......
T Consensus 92 YGqTGSGKTyTm~g~--------~~Giipr~~~~lF~~~~~~~~~-------~~~~~v~vS~~EIYnE~i~DLL~~~~~~ 156 (349)
T 3t0q_A 92 YGQTGSGKTYTMLNA--------GDGMIPMTLSHIFKWTANLKER-------GWNYEMECEYIEIYNETILDLLRDFKSH 156 (349)
T ss_dssp ECSTTSSHHHHHHST--------TTSHHHHHHHHHHHHHHHHGGG-------TEEEEEEEEEEEEETTEEEETTC-----
T ss_pred eCCCCCCCceEeCCC--------CCchhhHHHHHHHHHHHHhhhc-------CceeEEEEEEEEEEcchhhccccccccc
Confidence 999999999999983 4599999999999999886543 5689999999999999999999420000
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
.
T Consensus 157 --------~----------------------------------------------------------------------- 157 (349)
T 3t0q_A 157 --------D----------------------------------------------------------------------- 157 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------c-----------------------------------------------------------------------
Confidence 0
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcC-CCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDS-GHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNS 239 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~-~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~ 239 (286)
+ ..+++ ....+.|++++ .+++||+||+++.|.+++|++++|..|..+|++++|.||+
T Consensus 158 -------~-----~~~~~----------~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~ 215 (349)
T 3t0q_A 158 -------N-----IDEIL----------DSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNE 215 (349)
T ss_dssp -------------------------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------C
T ss_pred -------c-----ccccc----------ccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCccccccccc
Confidence 0 00000 04557787775 4689999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 240 QSSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 240 ~SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
+|||||+||+|+|.+... ..+....++|+||||||||.
T Consensus 216 ~SSRSH~if~i~v~~~~~-----~~~~~~~~kL~lVDLAGSEr 253 (349)
T 3t0q_A 216 RSSRSHSVFMVHINGRNL-----HTGETSQGKLNLVDLAGSER 253 (349)
T ss_dssp TGGGSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCC
T ss_pred ccCCcceEEEEEEEEEec-----CCCCeeEEEEEEEeCCCCCc
Confidence 999999999999998764 33456788999999999996
No 23
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=3.5e-41 Score=326.34 Aligned_cols=154 Identities=33% Similarity=0.463 Sum_probs=129.1
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+| .++++|||||++++||+.++..... ...|.|++||+|||||+|+|||.
T Consensus 145 YGqTGSGKTyTM~G------~~~~~Giipr~~~~lF~~i~~~~~~-------~~~~~v~vS~~EIYnE~i~DLL~----- 206 (412)
T 3u06_A 145 YGQTGSGKTYTMDG------VPESVGVIPRTVDLLFDSIRGYRNL-------GWEYEIKATFLEIYNEVLYDLLS----- 206 (412)
T ss_dssp ESSTTSSHHHHHTE------ETTEECHHHHHHHHHHHHHHHHGGG-------TEEEEEEEEEEEEETTEEEETTC-----
T ss_pred ecCCCCCCeeEecC------CCCCCccHHHHHHHHHHhhhhhccc-------CceEEEEEEEEEEeCCeeEEcCC-----
Confidence 99999999999999 4678999999999999999876432 57899999999999999977772
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 207 -------------------------------------------------------------------------------- 206 (412)
T 3u06_A 207 -------------------------------------------------------------------------------- 206 (412)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
+... ...+++.+++.+++||+||+++.|.+++|++++|..|..+|++++|.||++
T Consensus 207 -------------------~~~~------~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 261 (412)
T 3u06_A 207 -------------------NEQK------DMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNER 261 (412)
T ss_dssp -------------------CSCC------CCCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHH
T ss_pred -------------------CCCC------CceeeeeecCCCCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCCC
Confidence 1110 334556677889999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 262 SSRSH~if~i~v~~~~~-----~~~~~~~~kL~lVDLAGSEr 298 (412)
T 3u06_A 262 SSRSHAVTKLELIGRHA-----EKQEISVGSINLVDLAGSES 298 (412)
T ss_dssp HTTCEEEEEEEEEEEET-----TTTEEEEEEEEEEECCCCCC
T ss_pred CcCceEEEEEEEEEEeC-----CCCCEEEEEEEEEECCCCCc
Confidence 99999999999998763 34556788999999999996
No 24
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=4.2e-41 Score=319.49 Aligned_cols=159 Identities=31% Similarity=0.373 Sum_probs=119.3
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|. +.|||||++++||+.++..... ...|.|++||+|||||+|+|||....
T Consensus 91 YGqTGSGKTyTM~G~--------~~Giipr~~~~lF~~i~~~~~~-------~~~~~v~vS~~EIYnE~i~DLL~~~~-- 153 (347)
T 1f9v_A 91 YGQTGSGKTFTMLNP--------GDGIIPSTISHIFNWINKLKTK-------GWDYKVNCEFIEIYNENIVDLLRSDN-- 153 (347)
T ss_dssp ECCTTSSHHHHHHST--------TTSHHHHHHHHHHHHHHHHGGG-------TCEEEEEEEEEEEETTEEEETTC-----
T ss_pred ECCCCCCCcEeccCC--------CCCchHHHHHHHHHHHHhhhhc-------CCceEEEEEEEEEECCeeeeccCCcc--
Confidence 999999999999982 4699999999999999876432 57899999999999999999994200
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 154 -------------------------------------------------------------------------------- 153 (347)
T 1f9v_A 154 -------------------------------------------------------------------------------- 153 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcC-CCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDS-GHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNS 239 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~-~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~ 239 (286)
..... ......+.|++++ .++++|.||+++.|.+++|++++|..|..+|++++|.||+
T Consensus 154 --------------~~~~~-------~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~ 212 (347)
T 1f9v_A 154 --------------NNKED-------TSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNE 212 (347)
T ss_dssp -------------------------------CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------C
T ss_pred --------------ccccc-------cccCCceeEEEecCCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCC
Confidence 00000 0003456788764 5889999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 240 QSSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 240 ~SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
+|||||+||+|+|.+... ..+....++|+||||||||+
T Consensus 213 ~SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr 250 (347)
T 1f9v_A 213 HSSASHSIFIIHLSGSNA-----KTGAHSYGTLNLVDLAGSER 250 (347)
T ss_dssp CGGGSEEEEEEEEEEECC-------CCEEEEEEEEEECCCCCC
T ss_pred CCCCceEEEEEEEEEecC-----CCCceeeeEEEEEECCCCcc
Confidence 999999999999998653 23456778999999999996
No 25
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=1e-41 Score=324.99 Aligned_cols=161 Identities=32% Similarity=0.472 Sum_probs=133.2
Q ss_pred CCCCccccccccccccCCC-----CCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccch
Q psy15014 1 MLQTGSGKTYTMGTGFETD-----VSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEH 75 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~-----~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~ 75 (286)
||||||||||||+|+.... ......|||||++++||+.++.. ...|.|++||+|||||+|+|||.
T Consensus 95 YGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~----------~~~~~v~vS~~EIYnE~i~DLL~ 164 (359)
T 1x88_A 95 YGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDN----------GTEFSVKVSLLEIYNEELFDLLN 164 (359)
T ss_dssp EECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSS----------SEEEEEEEEEEEEETTEEEETTC
T ss_pred eCCCCCCCceEEeccCCccccccccccccCCchHHHHHHHHHHHhcc----------CceEEEEEEEEEEeCceeeehhc
Confidence 9999999999999964311 01235799999999999988652 56899999999999999988873
Q ss_pred hhhccccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhh
Q psy15014 76 ITCVQAHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEE 155 (286)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 155 (286)
.
T Consensus 165 ~------------------------------------------------------------------------------- 165 (359)
T 1x88_A 165 P------------------------------------------------------------------------------- 165 (359)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred hhhHHhhhcccCCCccccccccCCCCCccccccCCCCceEEEcCC--CcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcc
Q psy15014 156 ERDKVLASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSG--HSIYVTGATSKSIRSAQEAMNALRQGALSRTTA 233 (286)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~--~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~ 233 (286)
.... ...++|++++. ++++|+||+++.|.+++|++++|..|..+|+++
T Consensus 166 -------------------------~~~~-----~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~ 215 (359)
T 1x88_A 166 -------------------------SSDV-----SERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTA 215 (359)
T ss_dssp -------------------------TSCT-----TCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHH
T ss_pred -------------------------cccc-----cccceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccc
Confidence 1110 35688999984 799999999999999999999999999999999
Q ss_pred cCCCCCCCCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 234 STQMNSQSSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 234 sT~~N~~SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
+|.||++|||||+||+|+|.+..... +.......++|+||||||||.
T Consensus 216 ~T~~N~~SSRSH~if~i~i~~~~~~~--~~~~~~~~skL~lVDLAGSEr 262 (359)
T 1x88_A 216 ATLMNAYSSRSHSVFSVTIHMKETTI--DGEELVKIGKLNLVDLAGSEN 262 (359)
T ss_dssp HHHSTTHHHHCEEEEEEEEEEEEECT--TSCEEEEEEEEEEEECCCCCC
T ss_pred cccCCCCCCCccEEEEEEEEEecccC--CCCceEEEEEEEEEcCCCCCc
Confidence 99999999999999999999875421 122335678999999999996
No 26
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-40 Score=317.16 Aligned_cols=159 Identities=32% Similarity=0.384 Sum_probs=125.8
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|+ +.|||||++++||..++..... ...|.|++||+|||||+|+|||......
T Consensus 147 YGqTGSGKTyTM~g~--------~~Giipr~~~~lF~~i~~~~~~-------~~~~~v~vS~~EIYnE~i~DLL~~~~~~ 211 (403)
T 4etp_A 147 YGQTGSGKTFTMLNP--------GDGIIPSTISHIFNWINKLKTK-------GWDYKVNAEFIEIYNENIVDLLRSDNNN 211 (403)
T ss_dssp ESCTTSSHHHHHHCT--------TTSHHHHHHHHHHHHHHHHHTT-------TEEEEEEEEEEEEETTEEEETTCC----
T ss_pred ECCCCCCCceEeCCC--------CCccchhHHHHHHHHHHhhhcc-------CceEEEEEEEEEEecceeeEccCCcccc
Confidence 999999999999982 4599999999999999876532 5689999999999999999998420000
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 212 -------------------------------------------------------------------------------- 211 (403)
T 4etp_A 212 -------------------------------------------------------------------------------- 211 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcC-CCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDS-GHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNS 239 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~-~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~ 239 (286)
.. .......+.|++++ .++++|.||+++.|.+++|++.+|..|..+|++++|.||+
T Consensus 212 --------------~~---------~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~ 268 (403)
T 4etp_A 212 --------------KE---------DTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNE 268 (403)
T ss_dssp ---------------------------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHH
T ss_pred --------------cc---------ccccCcceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCc
Confidence 00 00013456777776 4679999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 240 QSSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 240 ~SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
+|||||+||+|+|.+... ..+....++|+||||||||.
T Consensus 269 ~SSRSH~if~i~v~~~~~-----~~~~~~~~kL~lVDLAGSEr 306 (403)
T 4etp_A 269 HSSRSHSIFIIHLSGSNA-----KTGAHSYGTLNLVDLAGSER 306 (403)
T ss_dssp HHHTSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCC
T ss_pred ccCCcccEEEEEEEEeec-----CCCCeeEEEEEEEECCCCcc
Confidence 999999999999998763 33455678999999999996
No 27
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=1.5e-38 Score=325.79 Aligned_cols=153 Identities=33% Similarity=0.437 Sum_probs=120.9
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||.| +++|||||++++||+.++...++ ...|.|++||+|||||+|+|||..
T Consensus 469 yGqtgsGKT~Tm~g--------~~~Giipr~~~~lf~~~~~~~~~-------~~~~~v~~s~~Eiyne~i~DLl~~---- 529 (715)
T 4h1g_A 469 YGQTGSGKTFTMSH--------PTNGMIPLSLKKIFNDIEELKEK-------GWSYTVRGKFIEIYNEAIVDLLNP---- 529 (715)
T ss_dssp ESSTTSSHHHHHHC--------TTTSHHHHHHHHHHHHHHHHGGG-------TEEEEEEEEEEEEETTEEEESSSC----
T ss_pred cCCCCCchhhccCC--------CCCCcHHHHHHHHHHHHHHhhcC-------CceEEEEEEEEEEECCEEEECCCC----
Confidence 99999999999987 35699999999999999876543 568999999999999999888731
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 530 -------------------------------------------------------------------------------- 529 (715)
T 4h1g_A 530 -------------------------------------------------------------------------------- 529 (715)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcC-CCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDS-GHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNS 239 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~-~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~ 239 (286)
... +...+.++++. .++++|+||+++.|.|.+|++++|..|.++|++++|.+|+
T Consensus 530 --------------------~~~-----~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~ 584 (715)
T 4h1g_A 530 --------------------KID-----PNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSND 584 (715)
T ss_dssp --------------------CCC-----TTCCCCEEEETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------
T ss_pred --------------------CCC-----CCCcceeEEecCCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccC
Confidence 110 03445666554 5679999999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 240 QSSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 240 ~SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
+|||||+||+|+|++... ..+....++|+||||||||+
T Consensus 585 ~ssRSH~i~~i~~~~~~~-----~~~~~~~~~l~lvDLAGsEr 622 (715)
T 4h1g_A 585 HSSRSHSIFIIDLQGYNS-----LTKESSYGTLNLIDLAGSER 622 (715)
T ss_dssp CGGGSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCC
T ss_pred ccccccEEEEEEEEEEec-----CCCCEeEEEEEEEeCCCccc
Confidence 999999999999998764 33456788999999999996
No 28
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=1e-38 Score=302.81 Aligned_cols=147 Identities=33% Similarity=0.439 Sum_probs=110.3
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHHHHHhhhcCCCCCCeEEEEEEEEEEEcccccccchhhhcc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQNIAEQARQNGDTPPEVVVQAQFLELYNEEVSGLEHITCVQ 80 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~~~~~~~~~~~~~~~~~v~~S~~EIYnE~i~DLL~~~~~~ 80 (286)
||||||||||||+|+..+...++++|||||++++||+.++...+ .....|.|++||+|||||+|+|||..
T Consensus 101 YGQTGSGKTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~~~------~~~~~~~v~vS~~EIYnE~i~DLL~~---- 170 (344)
T 3dc4_A 101 YGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQE------NNKDAIQVYASFIEIYNEKPFDLLGS---- 170 (344)
T ss_dssp ESSTTSSHHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHSSS------SCSSCCEEEEEEEEEESSCEEETTSS----
T ss_pred ecCCCCCCCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhhhh------ccccceEEEEEEEEEeCCeeEEccCC----
Confidence 99999999999988655445568899999999999999987532 12457999999999999999888842
Q ss_pred ccccccCCCCCCCccccccchhhhhHhhhcchhhhHHHHHHHHHHHhhhhhccccccchhhHHHHHHHhhhchhhhhhHH
Q psy15014 81 AHSIYSSSDSDSNSEDRQSVDSAYSAELANLTTEIDIKQKLIEELEKSHRRMQGIKQHYEDKFQQLQAKIRSTEEERDKV 160 (286)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T Consensus 171 -------------------------------------------------------------------------------- 170 (344)
T 3dc4_A 171 -------------------------------------------------------------------------------- 170 (344)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEEEeccEEEEcCCHHHHHHHHHHHHhcCCcccCCCCCC
Q psy15014 161 LASLNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIYVTGATSKSIRSAQEAMNALRQGALSRTTASTQMNSQ 240 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~v~gl~~~~V~S~eea~~lL~~G~~~R~~~sT~~N~~ 240 (286)
... ... ....+.|++++.|.+.+|++++|+.|..+|++++|.||+.
T Consensus 171 --------------------~~~------~~~--------~~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 216 (344)
T 3dc4_A 171 --------------------TPH------MPM--------VAARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSN 216 (344)
T ss_dssp --------------------CTT------SBC--------CSSTTTCSCCEECSSHHHHHHHHHHHHHTCC---------
T ss_pred --------------------CCC------Ccc--------ccccccCceecccCCHHHHHHHHHHHHhhcccccccCCCC
Confidence 000 000 0011247889999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEEeeecccCCCCCceeEEEEEEEeCCCCcC
Q psy15014 241 SSRSHAIFTLHIQQKRLVKVEDPEGEIGEFLLFLTFPTGSAS 282 (286)
Q Consensus 241 SSRSHaIftI~v~~~~~~~~~~~~~~~~~s~L~lVDLAGS~~ 282 (286)
|||||+||+|+|.+. ...++|+||||||||+
T Consensus 217 SSRSH~Ifti~v~~~-----------~~~skl~lVDLAGSEr 247 (344)
T 3dc4_A 217 SSRSHAIVTIHVKSK-----------THHSRMNIVDLAGSEG 247 (344)
T ss_dssp -CCEEEEEEEEEECS-----------SCEEEEEEEECCCCCC
T ss_pred CCCceEEEEEEEEec-----------CcEEEEEEEECCCCcc
Confidence 999999999999752 2468999999999995
No 29
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=98.99 E-value=3.7e-11 Score=110.52 Aligned_cols=45 Identities=16% Similarity=0.209 Sum_probs=39.2
Q ss_pred CCCCccccccccccccCCCCCCCCcChHHHHHHHHHHHHHH-HHHhhhcCCCCCCeEEEEEEEEEEE-cccccccc
Q psy15014 1 MLQTGSGKTYTMGTGFETDVSEEMLGIIPRAITHLFEGIQN-IAEQARQNGDTPPEVVVQAQFLELY-NEEVSGLE 74 (286)
Q Consensus 1 YGqTGSGKTyTm~G~~~~~~~~~~~GIiPRal~~LF~~~~~-~~~~~~~~~~~~~~~~v~~S~~EIY-nE~i~DLL 74 (286)
||||||||| ||++..+|..... .. +.|.++++|+||| ||.++|||
T Consensus 99 yGQTGsGKT-------------------~ral~q~f~~~~~~~~----------~~Y~~tlq~veLy~Ne~~~DLL 145 (298)
T 2o0a_A 99 LSTTPHGSL-------------------RESLIKFLAEKDTIYQ----------KQYVITLQFVFLSDDEFSQDML 145 (298)
T ss_dssp ECSSCCHHH-------------------HHHHHHHHHSTTSHHH----------HHEEEEEEEEEEECC-CEEETT
T ss_pred ECCCCCCcc-------------------HHHHHHHHHHhhhhcc----------cceEEEEEEEEEecCCchHHhc
Confidence 899999999 9999999998755 31 4899999999999 99998887
No 30
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=81.89 E-value=0.31 Score=39.87 Aligned_cols=13 Identities=31% Similarity=0.204 Sum_probs=11.7
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||++|+|||+.+.
T Consensus 44 ~G~~G~GKTtL~~ 56 (180)
T 3ec2_A 44 VGSPGVGKTHLAV 56 (180)
T ss_dssp CCSSSSSHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 7999999999884
No 31
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=78.59 E-value=0.44 Score=38.57 Aligned_cols=13 Identities=23% Similarity=0.348 Sum_probs=11.8
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||++|+|||+.+.
T Consensus 42 ~G~~G~GKTtL~~ 54 (149)
T 2kjq_A 42 WGEEGAGKSHLLQ 54 (149)
T ss_dssp ESSSTTTTCHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 6999999999985
No 32
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=75.21 E-value=0.53 Score=39.03 Aligned_cols=13 Identities=38% Similarity=0.513 Sum_probs=11.6
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||++|+|||+.+.
T Consensus 60 ~G~~GtGKT~la~ 72 (202)
T 2w58_A 60 HGSFGVGKTYLLA 72 (202)
T ss_dssp ECSTTSSHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 6999999999874
No 33
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=72.72 E-value=0.66 Score=42.10 Aligned_cols=13 Identities=31% Similarity=0.554 Sum_probs=12.0
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||++|+||||.+.
T Consensus 158 ~G~~GtGKT~La~ 170 (308)
T 2qgz_A 158 YGDMGIGKSYLLA 170 (308)
T ss_dssp ECSTTSSHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 7999999999985
No 34
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=72.68 E-value=0.65 Score=36.89 Aligned_cols=13 Identities=31% Similarity=0.406 Sum_probs=11.5
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||.+|+|||+.+.
T Consensus 49 ~G~~G~GKT~l~~ 61 (195)
T 1jbk_A 49 IGEPGVGKTAIVE 61 (195)
T ss_dssp ECCTTSCHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 6999999999873
No 35
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=72.14 E-value=0.64 Score=37.06 Aligned_cols=13 Identities=31% Similarity=0.394 Sum_probs=11.5
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||.+|+|||+.+.
T Consensus 49 ~G~~G~GKT~la~ 61 (187)
T 2p65_A 49 LGDPGVGKTAIVE 61 (187)
T ss_dssp ESCGGGCHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 6999999999874
No 36
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=70.76 E-value=0.77 Score=39.58 Aligned_cols=12 Identities=33% Similarity=0.302 Sum_probs=11.2
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 55 ~G~~G~GKTtl~ 66 (254)
T 1ixz_A 55 VGPPGVGKTHLA 66 (254)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 37
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=68.83 E-value=1 Score=39.01 Aligned_cols=12 Identities=33% Similarity=0.432 Sum_probs=11.3
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 50 ~G~~GtGKT~la 61 (268)
T 2r62_A 50 VGPPGTGKTLLA 61 (268)
T ss_dssp BCSSCSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999987
No 38
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=68.72 E-value=0.91 Score=37.83 Aligned_cols=13 Identities=23% Similarity=0.128 Sum_probs=11.5
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||++|+|||+.+.
T Consensus 58 ~G~~G~GKT~la~ 70 (242)
T 3bos_A 58 WGPVKSGRTHLIH 70 (242)
T ss_dssp ECSTTSSHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 7999999999874
No 39
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=68.67 E-value=1 Score=39.93 Aligned_cols=11 Identities=55% Similarity=0.640 Sum_probs=10.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||.+|
T Consensus 32 Gp~GsGKSTll 42 (261)
T 2eyu_A 32 GPTGSGKSTTI 42 (261)
T ss_dssp CSTTCSHHHHH
T ss_pred CCCCccHHHHH
Confidence 89999999998
No 40
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=67.17 E-value=1 Score=36.62 Aligned_cols=12 Identities=42% Similarity=0.393 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 44 ~G~~G~GKT~l~ 55 (226)
T 2chg_A 44 SGPPGTGKTATA 55 (226)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 41
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=66.48 E-value=1.1 Score=38.37 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=25.3
Q ss_pred CCCCccccccccc------ccc-----CCCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TGF-----ETDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~~-----~~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+... +.. .......-.|.....+..+|.....
T Consensus 45 ~G~~GtGKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 96 (262)
T 2qz4_A 45 LGPPGCGKTLLAKAVATEAQVPFLAMAGAEFVEVIGGLGAARVRSLFKEARA 96 (262)
T ss_dssp ESCTTSSHHHHHHHHHHHHTCCEEEEETTTTSSSSTTHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhCCCEEEechHHHHhhccChhHHHHHHHHHHHHh
Confidence 7999999999872 100 0011123346667778888887654
No 42
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=66.03 E-value=1.3 Score=41.40 Aligned_cols=12 Identities=50% Similarity=0.609 Sum_probs=11.0
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|+||||||.+|-
T Consensus 130 GptGSGKTTlL~ 141 (356)
T 3jvv_A 130 GPTGSGKSTTLA 141 (356)
T ss_dssp CSTTSCHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 899999999983
No 43
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=66.03 E-value=1.1 Score=40.03 Aligned_cols=12 Identities=33% Similarity=0.426 Sum_probs=11.3
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 43 ~G~~GtGKT~la 54 (324)
T 1l8q_A 43 YGSVGTGKTHLL 54 (324)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999988
No 44
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=64.75 E-value=1.2 Score=39.07 Aligned_cols=12 Identities=33% Similarity=0.302 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 79 ~Gp~GtGKTtl~ 90 (278)
T 1iy2_A 79 VGPPGVGKTHLA 90 (278)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCcChHHHHH
Confidence 799999999987
No 45
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=64.71 E-value=1.2 Score=38.38 Aligned_cols=12 Identities=33% Similarity=0.432 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 51 ~G~~GtGKT~la 62 (257)
T 1lv7_A 51 VGPPGTGKTLLA 62 (257)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 799999999876
No 46
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=64.29 E-value=1.3 Score=35.00 Aligned_cols=12 Identities=17% Similarity=0.235 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+..
T Consensus 30 ~G~~GtGKt~lA 41 (145)
T 3n70_A 30 YGAPGTGRMTGA 41 (145)
T ss_dssp ESSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 47
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=63.73 E-value=1 Score=35.69 Aligned_cols=13 Identities=15% Similarity=-0.061 Sum_probs=11.3
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||.+|+|||+...
T Consensus 33 ~G~~GtGKt~lA~ 45 (143)
T 3co5_A 33 TGEAGSPFETVAR 45 (143)
T ss_dssp EEETTCCHHHHHG
T ss_pred ECCCCccHHHHHH
Confidence 6999999998773
No 48
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=63.61 E-value=1.3 Score=38.68 Aligned_cols=12 Identities=42% Similarity=0.399 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 56 ~G~~GtGKT~la 67 (310)
T 1ofh_A 56 IGPTGVGKTEIA 67 (310)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 49
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=63.54 E-value=1.3 Score=43.30 Aligned_cols=11 Identities=55% Similarity=0.552 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.||||||.||
T Consensus 267 GptGSGKTTlL 277 (511)
T 2oap_1 267 GETASGKTTTL 277 (511)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999998
No 50
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=63.20 E-value=1.5 Score=37.46 Aligned_cols=11 Identities=45% Similarity=0.504 Sum_probs=9.7
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||..+
T Consensus 83 g~TGsGKTt~~ 93 (235)
T 3llm_A 83 GATGCGKTTQV 93 (235)
T ss_dssp CCTTSSHHHHH
T ss_pred eCCCCCcHHhH
Confidence 89999999765
No 51
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=63.20 E-value=1.5 Score=41.79 Aligned_cols=11 Identities=55% Similarity=0.649 Sum_probs=10.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||.||
T Consensus 174 GpnGSGKTTlL 184 (418)
T 1p9r_A 174 GPTGSGKSTTL 184 (418)
T ss_dssp CSTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999998
No 52
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=62.88 E-value=1.4 Score=38.41 Aligned_cols=12 Identities=33% Similarity=0.069 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 70 ~G~~GtGKT~la 81 (272)
T 1d2n_A 70 EGPPHSGKTALA 81 (272)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999987
No 53
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=61.80 E-value=1.5 Score=38.12 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=26.0
Q ss_pred CCCCcccccccccc------cc-----CCCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMGT------GF-----ETDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~G------~~-----~~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+.+-- .. .........|-....+..+|.....
T Consensus 57 ~G~~GtGKT~la~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (285)
T 3h4m_A 57 YGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKE 108 (285)
T ss_dssp ESSSSSSHHHHHHHHHHHTTCEEEEEEGGGGCCCSTTHHHHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHhCCCEEEEehHHHHHhccchHHHHHHHHHHHHHH
Confidence 79999999998721 00 0011234456677778888877654
No 54
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=61.65 E-value=1.7 Score=40.50 Aligned_cols=12 Identities=50% Similarity=0.601 Sum_probs=10.9
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|+||||||.+|-
T Consensus 143 G~~GsGKTTll~ 154 (372)
T 2ewv_A 143 GPTGSGKSTTIA 154 (372)
T ss_dssp CSSSSSHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 899999999983
No 55
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=61.25 E-value=1.8 Score=35.58 Aligned_cols=11 Identities=27% Similarity=0.483 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.+|
T Consensus 8 GpsGaGKsTl~ 18 (186)
T 3a00_A 8 GPSGTGKSTLL 18 (186)
T ss_dssp SSSSSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 56
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=60.79 E-value=1.6 Score=38.95 Aligned_cols=12 Identities=33% Similarity=0.343 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 55 ~Gp~GtGKT~la 66 (301)
T 3cf0_A 55 YGPPGCGKTLLA 66 (301)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCcCHHHHH
Confidence 799999999987
No 57
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=60.08 E-value=1.5 Score=38.68 Aligned_cols=12 Identities=33% Similarity=0.379 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 73 ~G~~GtGKT~la 84 (309)
T 3syl_A 73 TGNPGTGKTTVA 84 (309)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 58
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=59.87 E-value=1.9 Score=35.39 Aligned_cols=11 Identities=36% Similarity=0.561 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 14 Gp~GsGKSTl~ 24 (205)
T 3tr0_A 14 APSGAGKTSLV 24 (205)
T ss_dssp CCTTSCHHHHH
T ss_pred CcCCCCHHHHH
Confidence 89999999987
No 59
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=59.51 E-value=1.7 Score=35.55 Aligned_cols=12 Identities=33% Similarity=0.243 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||+.+
T Consensus 51 ~G~~G~GKT~l~ 62 (250)
T 1njg_A 51 SGTRGVGKTSIA 62 (250)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 60
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=59.28 E-value=1.4 Score=40.66 Aligned_cols=12 Identities=17% Similarity=-0.081 Sum_probs=11.2
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||.++
T Consensus 51 ~GpPGTGKT~~v 62 (318)
T 3te6_A 51 TNADDSTKFQLV 62 (318)
T ss_dssp ECCCSHHHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999887
No 61
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=59.18 E-value=2 Score=35.02 Aligned_cols=12 Identities=33% Similarity=0.321 Sum_probs=10.9
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|.+|||||+.+-
T Consensus 16 G~nGsGKSTl~~ 27 (171)
T 4gp7_A 16 GSSGSGKSTFAK 27 (171)
T ss_dssp CCTTSCHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 899999999884
No 62
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=59.17 E-value=4.4 Score=38.88 Aligned_cols=42 Identities=21% Similarity=0.303 Sum_probs=29.3
Q ss_pred CCCCccccccccc------cc-----cCCCCCCCCcChHHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TG-----FETDVSEEMLGIIPRAITHLFEGIQNI 42 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~-----~~~~~~~~~~GIiPRal~~LF~~~~~~ 42 (286)
||+.|+|||...- |- ..........|--++.++.+|......
T Consensus 212 ~GPPGtGKT~lakAiA~~~~~~~~~v~~~~l~~~~~Ge~e~~ir~lF~~A~~~ 264 (428)
T 4b4t_K 212 YGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLAREN 264 (428)
T ss_dssp ESCTTTTHHHHHHHHHHHHTCEEEEEEGGGTCCSSCSHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHhCCCeEEEecchhhccccchhHHHHHHHHHHHHHc
Confidence 8999999998761 10 001123356788899999999988764
No 63
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=59.15 E-value=1.8 Score=39.33 Aligned_cols=12 Identities=33% Similarity=0.216 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 57 ~Gp~G~GKTTLa 68 (334)
T 1in4_A 57 AGPPGLGKTTLA 68 (334)
T ss_dssp ESSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999987
No 64
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=58.98 E-value=1.8 Score=37.92 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=23.4
Q ss_pred CCCCccccccccc------cc-c---C-CCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TG-F---E-TDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~-~---~-~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+.+- +. . . ........|-....+..+|.....
T Consensus 60 ~Gp~GtGKT~la~~la~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~ 111 (297)
T 3b9p_A 60 FGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARH 111 (297)
T ss_dssp ESSSSSCHHHHHHHHHHHTTCEEEEEESTTTSSSSCSCHHHHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHHhCCCeEEeeHHHHhhcccchHHHHHHHHHHHHHH
Confidence 7999999998761 10 0 0 011122344456667777776543
No 65
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=58.65 E-value=1.9 Score=39.01 Aligned_cols=12 Identities=42% Similarity=0.523 Sum_probs=11.3
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||+++
T Consensus 52 ~Gp~G~GKTtla 63 (340)
T 1sxj_C 52 YGPPGTGKTSTI 63 (340)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999988
No 66
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=57.76 E-value=2 Score=40.92 Aligned_cols=12 Identities=33% Similarity=0.293 Sum_probs=11.4
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 136 ~Gp~G~GKTtLa 147 (440)
T 2z4s_A 136 YGGVGLGKTHLL 147 (440)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999998
No 67
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=57.76 E-value=2.1 Score=38.22 Aligned_cols=12 Identities=25% Similarity=0.490 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+..
T Consensus 51 ~G~~GtGKT~la 62 (350)
T 1g8p_A 51 FGDRGTGKSTAV 62 (350)
T ss_dssp ECCGGGCTTHHH
T ss_pred ECCCCccHHHHH
Confidence 799999999887
No 68
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=57.53 E-value=2.2 Score=35.67 Aligned_cols=11 Identities=27% Similarity=0.471 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 11 GpsGaGKSTLl 21 (198)
T 1lvg_A 11 GPSGAGKSTLL 21 (198)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999988
No 69
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=57.27 E-value=2.3 Score=38.12 Aligned_cols=12 Identities=42% Similarity=0.385 Sum_probs=11.3
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 50 ~G~~G~GKT~l~ 61 (387)
T 2v1u_A 50 YGLTGTGKTAVA 61 (387)
T ss_dssp CBCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 70
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=56.90 E-value=2 Score=37.13 Aligned_cols=12 Identities=25% Similarity=0.448 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+..
T Consensus 35 ~G~~GtGKt~la 46 (265)
T 2bjv_A 35 IGERGTGKELIA 46 (265)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 699999999876
No 71
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=56.26 E-value=2.4 Score=34.76 Aligned_cols=11 Identities=45% Similarity=0.770 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 45 ~~TGsGKT~~~ 55 (207)
T 2gxq_A 45 ARTGTGKTLAF 55 (207)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCChHHHHH
Confidence 68999999874
No 72
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=55.93 E-value=2.4 Score=34.65 Aligned_cols=11 Identities=18% Similarity=0.172 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 12 GpsGsGKSTL~ 22 (180)
T 1kgd_A 12 GAHGVGRRHIK 22 (180)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 73
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=55.91 E-value=2.6 Score=34.60 Aligned_cols=11 Identities=27% Similarity=0.504 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 47 apTGsGKT~~~ 57 (206)
T 1vec_A 47 AKNGTGKSGAY 57 (206)
T ss_dssp CCSSSTTHHHH
T ss_pred CCCCCchHHHH
Confidence 68999999765
No 74
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=55.70 E-value=2.2 Score=37.86 Aligned_cols=41 Identities=22% Similarity=0.312 Sum_probs=24.8
Q ss_pred CCCCcccccccc---ccccC--------CCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTM---GTGFE--------TDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm---~G~~~--------~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||+.|+|||+.+ .|... .+......|-..+.+..+|+....
T Consensus 50 ~Gp~GtGKTtLakala~~~~~~~i~i~g~~l~~~~~~~~~~~i~~vf~~a~~ 101 (274)
T 2x8a_A 50 AGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKN 101 (274)
T ss_dssp ESSTTSCHHHHHHHHHHHTTCEEEEEETTTTCSSTTHHHHHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHcCCCEEEEEcHHHHhhhhhHHHHHHHHHHHHHHh
Confidence 799999999886 11100 011122345567778888887543
No 75
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=55.58 E-value=5.2 Score=38.43 Aligned_cols=42 Identities=14% Similarity=0.168 Sum_probs=29.2
Q ss_pred CCCCccccccccc------cc-----cCCCCCCCCcChHHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TG-----FETDVSEEMLGIIPRAITHLFEGIQNI 42 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~-----~~~~~~~~~~GIiPRal~~LF~~~~~~ 42 (286)
||+.|+|||...- |- ..........|--.+.++.+|......
T Consensus 221 yGPPGTGKTllAkAiA~e~~~~f~~v~~s~l~~~~vGese~~ir~lF~~A~~~ 273 (434)
T 4b4t_M 221 YGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEK 273 (434)
T ss_dssp ESCTTSSHHHHHHHHHHHHTCEEEEEEGGGGCSSCSSHHHHHHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHHhCCCEEEEehhhhhhcccchHHHHHHHHHHHHHhc
Confidence 8999999998761 10 001122355688899999999988765
No 76
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=55.25 E-value=2.5 Score=42.06 Aligned_cols=12 Identities=42% Similarity=0.412 Sum_probs=11.0
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|+.|||||+|+.
T Consensus 212 GPPGTGKT~ti~ 223 (646)
T 4b3f_X 212 GPPGTGKTTTVV 223 (646)
T ss_dssp CCTTSCHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 899999999984
No 77
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=54.90 E-value=2.4 Score=38.48 Aligned_cols=41 Identities=22% Similarity=0.399 Sum_probs=25.8
Q ss_pred CCCCccccccccc-------ccc-----CCCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG-------TGF-----ETDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~-------G~~-----~~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+.+- +.. .........|-..+.+..+|.....
T Consensus 51 ~GppGtGKT~la~ala~~~~~~~~~~i~~~~l~~~~~g~~~~~~~~lf~~a~~ 103 (322)
T 1xwi_A 51 FGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARE 103 (322)
T ss_dssp ESSSSSCHHHHHHHHHHHTTSCEEEEEECCSSCCSSCCSCHHHHHHHHHHHHH
T ss_pred ECCCCccHHHHHHHHHHHcCCCcEEEEEhHHHHhhhhhHHHHHHHHHHHHHHh
Confidence 7999999999871 110 0011123346667888889987654
No 78
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=54.52 E-value=2 Score=38.30 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=24.6
Q ss_pred CCCCccccccccc------cccC-----CCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TGFE-----TDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~~~-----~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+..- |-.- ........|-.+..+..+|.....
T Consensus 42 ~GppGtGKT~la~aiA~~l~~~~i~v~~~~l~~~~~g~~~~~i~~~f~~a~~ 93 (293)
T 3t15_A 42 WGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAE 93 (293)
T ss_dssp EECTTSCHHHHHHHHHHHHTCCCEEEEHHHHHCC---HHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhCCCEEEEeHHHhhhccCchhHHHHHHHHHHHHH
Confidence 7999999999872 1100 000123457788888889988753
No 79
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=54.50 E-value=2.4 Score=38.15 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=25.5
Q ss_pred CCCCcccccccccc------ccC-----CCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMGT------GFE-----TDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~G------~~~-----~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+..-- ..- ........|-....+..+|.....
T Consensus 57 ~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~~~~g~~~~~~~~~f~~a~~ 108 (322)
T 3eie_A 57 YGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARE 108 (322)
T ss_dssp ECSSSSCHHHHHHHHHHHHTCEEEEEEHHHHHTTTGGGHHHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHHHHHCCCEEEEchHHHhhcccchHHHHHHHHHHHHHh
Confidence 79999999988721 000 000123446677788888887754
No 80
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=53.86 E-value=2.5 Score=37.09 Aligned_cols=12 Identities=42% Similarity=0.387 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||++.
T Consensus 53 ~G~~GtGKt~la 64 (311)
T 4fcw_A 53 LGPTGVGKTELA 64 (311)
T ss_dssp ESCSSSSHHHHH
T ss_pred ECCCCcCHHHHH
Confidence 699999999887
No 81
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=53.47 E-value=2.8 Score=34.98 Aligned_cols=11 Identities=18% Similarity=0.226 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 27 GpnGsGKSTLl 37 (207)
T 1znw_A 27 GPSAVGKSTVV 37 (207)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 82
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=52.81 E-value=2.6 Score=38.98 Aligned_cols=11 Identities=64% Similarity=0.667 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.||||||.++
T Consensus 182 G~sGsGKSTll 192 (361)
T 2gza_A 182 GETGSGKTTLM 192 (361)
T ss_dssp ESSSSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999988
No 83
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=52.16 E-value=3 Score=34.55 Aligned_cols=11 Identities=36% Similarity=0.416 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||+.+
T Consensus 7 G~nGsGKTTLl 17 (178)
T 1ye8_A 7 GEPGVGKTTLV 17 (178)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 99999999987
No 84
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=52.14 E-value=3.3 Score=34.60 Aligned_cols=11 Identities=36% Similarity=0.335 Sum_probs=10.0
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+.+
T Consensus 29 G~sGsGKSTl~ 39 (208)
T 3c8u_A 29 GAPGSGKSTLS 39 (208)
T ss_dssp CCTTSCTHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 85
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=52.08 E-value=3.1 Score=37.74 Aligned_cols=11 Identities=36% Similarity=0.495 Sum_probs=10.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.|+
T Consensus 107 G~nGsGKTTll 117 (302)
T 3b9q_A 107 GVNGGGKTTSL 117 (302)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCCCHHHHH
Confidence 89999999998
No 86
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=51.87 E-value=2.1 Score=35.11 Aligned_cols=12 Identities=58% Similarity=0.601 Sum_probs=10.6
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
++||+|||.+..
T Consensus 55 ~~tGsGKT~~~~ 66 (216)
T 3b6e_A 55 LPTGSGKTRVAV 66 (216)
T ss_dssp CSCHHHHHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 789999999874
No 87
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=51.33 E-value=3.3 Score=34.49 Aligned_cols=11 Identities=55% Similarity=0.712 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 58 ~pTGsGKT~~~ 68 (224)
T 1qde_A 58 AQSGTGKTGTF 68 (224)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 68999999883
No 88
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=51.16 E-value=3.6 Score=34.80 Aligned_cols=11 Identities=36% Similarity=0.474 Sum_probs=6.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 34 Gp~GsGKSTl~ 44 (231)
T 3lnc_A 34 SPSGCGKTTVA 44 (231)
T ss_dssp CSCC----CHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 89
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=51.03 E-value=3.2 Score=34.77 Aligned_cols=11 Identities=27% Similarity=0.232 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.++
T Consensus 15 GpsGsGKsTl~ 25 (208)
T 3tau_A 15 GPSGVGKGTVR 25 (208)
T ss_dssp CCTTSCHHHHH
T ss_pred CcCCCCHHHHH
Confidence 89999999987
No 90
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=50.87 E-value=2.9 Score=37.44 Aligned_cols=12 Identities=25% Similarity=0.299 Sum_probs=11.2
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+++
T Consensus 42 ~Gp~G~GKTtl~ 53 (354)
T 1sxj_E 42 YGPNGTGKKTRC 53 (354)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 91
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=50.44 E-value=3 Score=38.22 Aligned_cols=11 Identities=55% Similarity=0.513 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||.++
T Consensus 178 G~~GsGKTTll 188 (330)
T 2pt7_A 178 GGTGSGKTTYI 188 (330)
T ss_dssp ESTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999988
No 92
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=50.21 E-value=3.4 Score=35.06 Aligned_cols=11 Identities=27% Similarity=0.320 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 30 GpsGsGKSTLl 40 (218)
T 1z6g_A 30 GPSGVGKGTLI 40 (218)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 93
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=49.60 E-value=3.4 Score=36.46 Aligned_cols=12 Identities=33% Similarity=0.279 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 44 ~G~~GtGKT~la 55 (324)
T 1hqc_A 44 FGPPGLGKTTLA 55 (324)
T ss_dssp ECCTTCCCHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 94
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.54 E-value=7 Score=37.27 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=29.1
Q ss_pred CCCCccccccccc------cc-----cCCCCCCCCcChHHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TG-----FETDVSEEMLGIIPRAITHLFEGIQNI 42 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~-----~~~~~~~~~~GIiPRal~~LF~~~~~~ 42 (286)
||+.|+|||...- |- ........-.|--.+.++.+|......
T Consensus 188 ~GPPGTGKTllAkAiA~e~~~~f~~v~~s~l~sk~vGese~~vr~lF~~Ar~~ 240 (405)
T 4b4t_J 188 YGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREH 240 (405)
T ss_dssp ESCSSSSHHHHHHHHHHHHTCEEEEEEGGGGSCSSTTHHHHHHHHHHHHHHHT
T ss_pred eCCCCCCHHHHHHHHHHhhCCCceEEEhHHhhccccchHHHHHHHHHHHHHHh
Confidence 8999999998761 10 001122345688899999999988764
No 95
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=49.27 E-value=3.2 Score=38.00 Aligned_cols=12 Identities=50% Similarity=0.562 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+..
T Consensus 78 ~Gp~GtGKT~la 89 (376)
T 1um8_A 78 IGPTGSGKTLMA 89 (376)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 96
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=49.23 E-value=3.6 Score=40.89 Aligned_cols=11 Identities=45% Similarity=0.525 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+|+
T Consensus 171 G~pGTGKTt~l 181 (608)
T 1w36_D 171 GGPGTGKTTTV 181 (608)
T ss_dssp CCTTSTHHHHH
T ss_pred eCCCCCHHHHH
Confidence 89999999987
No 97
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=48.55 E-value=3.3 Score=37.23 Aligned_cols=12 Identities=42% Similarity=0.684 Sum_probs=11.2
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||..+
T Consensus 50 ~G~~G~GKTtl~ 61 (389)
T 1fnn_A 50 LGRPGTGKTVTL 61 (389)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 98
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=48.52 E-value=3.3 Score=33.27 Aligned_cols=12 Identities=42% Similarity=0.584 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|||||.-|
T Consensus 29 ~G~NGsGKStil 40 (149)
T 1f2t_A 29 IGQNGSGKSSLL 40 (149)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999877
No 99
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=48.49 E-value=3.4 Score=36.81 Aligned_cols=12 Identities=42% Similarity=0.523 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||+++
T Consensus 64 ~G~~G~GKT~la 75 (353)
T 1sxj_D 64 YGPPGTGKTSTI 75 (353)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999886
No 100
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.34 E-value=9.1 Score=37.21 Aligned_cols=42 Identities=21% Similarity=0.326 Sum_probs=29.1
Q ss_pred CCCCccccccccc------cc-----cCCCCCCCCcChHHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TG-----FETDVSEEMLGIIPRAITHLFEGIQNI 42 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~-----~~~~~~~~~~GIiPRal~~LF~~~~~~ 42 (286)
||+.|+|||...- |- ........-.|--.+.++.+|......
T Consensus 249 yGPPGTGKTlLAkAiA~e~~~~fi~vs~s~L~sk~vGesek~ir~lF~~Ar~~ 301 (467)
T 4b4t_H 249 YGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTK 301 (467)
T ss_dssp CSCTTSSHHHHHHHHHHHHTCEEEEEEGGGGCCCSSSHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHHHHhccCCCeEEEEhHHhhcccCCHHHHHHHHHHHHHHhc
Confidence 8999999997651 10 001122355788899999999988764
No 101
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=48.18 E-value=3 Score=37.58 Aligned_cols=12 Identities=42% Similarity=0.407 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 76 ~GppGtGKT~la 87 (368)
T 3uk6_A 76 AGQPGTGKTAIA 87 (368)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 102
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=47.97 E-value=4 Score=34.41 Aligned_cols=11 Identities=55% Similarity=0.791 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 69 a~TGsGKT~~~ 79 (236)
T 2pl3_A 69 AKTGSGKTLAF 79 (236)
T ss_dssp CCTTSCHHHHH
T ss_pred eCCCCcHHHHH
Confidence 68999999874
No 103
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=47.89 E-value=2.7 Score=37.54 Aligned_cols=12 Identities=25% Similarity=0.169 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+.+
T Consensus 52 ~G~pGtGKT~la 63 (331)
T 2r44_A 52 EGVPGLAKTLSV 63 (331)
T ss_dssp ESCCCHHHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999876
No 104
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=47.80 E-value=4 Score=37.06 Aligned_cols=11 Identities=45% Similarity=0.474 Sum_probs=10.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.++
T Consensus 109 G~nGsGKTTll 119 (304)
T 1rj9_A 109 GVNGVGKTTTI 119 (304)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999998
No 105
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=47.71 E-value=4 Score=34.17 Aligned_cols=11 Identities=55% Similarity=0.779 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 64 apTGsGKT~~~ 74 (228)
T 3iuy_A 64 AQTGTGKTLSY 74 (228)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCChHHHHH
Confidence 68999999874
No 106
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=47.50 E-value=3.6 Score=37.71 Aligned_cols=41 Identities=17% Similarity=0.218 Sum_probs=24.0
Q ss_pred CCCCccccccccc------ccc-----CCCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TGF-----ETDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~~-----~~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+.+- +.. .........|-....+..+|.....
T Consensus 123 ~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~~~~g~~~~~~~~~~~~a~~ 174 (357)
T 3d8b_A 123 FGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARC 174 (357)
T ss_dssp ESSTTSSHHHHHHHHHHHTTCEEEEEEGGGGCCSSTTHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHcCCeEEEEehHHhhccccchHHHHHHHHHHHHHh
Confidence 7999999999861 100 0011122345566777777776543
No 107
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=47.42 E-value=4 Score=34.29 Aligned_cols=12 Identities=42% Similarity=0.337 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|++|||||..+
T Consensus 36 ~GpnGsGKSTLl 47 (251)
T 2ehv_A 36 TGGTGTGKTTFA 47 (251)
T ss_dssp ECCTTSSHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 489999999987
No 108
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=47.21 E-value=4.1 Score=33.12 Aligned_cols=11 Identities=36% Similarity=0.383 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 9 G~~GaGKSTl~ 19 (189)
T 2bdt_A 9 GPAGVGKSTTC 19 (189)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999976
No 109
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=46.86 E-value=3.5 Score=35.04 Aligned_cols=12 Identities=50% Similarity=0.675 Sum_probs=10.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.++||||||.+.
T Consensus 73 ~apTGsGKT~~~ 84 (237)
T 3bor_A 73 QAQSGTGKTATF 84 (237)
T ss_dssp CCCSSHHHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 378999999874
No 110
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=46.57 E-value=3.8 Score=37.34 Aligned_cols=12 Identities=50% Similarity=0.542 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 57 ~GppGtGKT~la 68 (363)
T 3hws_A 57 IGPTGSGKTLLA 68 (363)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999976
No 111
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=46.36 E-value=4.3 Score=33.16 Aligned_cols=11 Identities=27% Similarity=0.232 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 13 G~~GsGKSTl~ 23 (207)
T 2j41_A 13 GPSGVGKGTVR 23 (207)
T ss_dssp CSTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999886
No 112
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=46.31 E-value=4.3 Score=33.74 Aligned_cols=11 Identities=36% Similarity=0.567 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 58 ~~TGsGKT~~~ 68 (220)
T 1t6n_A 58 AKSGMGKTAVF 68 (220)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCchhhhh
Confidence 58999999875
No 113
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=46.22 E-value=3.8 Score=37.60 Aligned_cols=12 Identities=33% Similarity=0.570 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 90 ~GppGtGKT~la 101 (355)
T 2qp9_X 90 YGPPGTGKSYLA 101 (355)
T ss_dssp ECSTTSCHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999876
No 114
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=46.10 E-value=3.3 Score=33.43 Aligned_cols=12 Identities=33% Similarity=0.338 Sum_probs=10.5
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|++|||||..+
T Consensus 32 ~G~NGsGKStll 43 (182)
T 3kta_A 32 VGANGSGKSNIG 43 (182)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999876
No 115
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=46.06 E-value=4 Score=35.61 Aligned_cols=12 Identities=42% Similarity=0.393 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||++.
T Consensus 44 ~G~~G~GKt~la 55 (319)
T 2chq_A 44 SGPPGTGKTATA 55 (319)
T ss_dssp ESSSSSSHHHHH
T ss_pred ECcCCcCHHHHH
Confidence 799999999886
No 116
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=46.02 E-value=3.8 Score=33.79 Aligned_cols=12 Identities=33% Similarity=0.360 Sum_probs=10.7
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|.+|+|||..+
T Consensus 29 ~G~~GsGKTtl~ 40 (235)
T 2w0m_A 29 TGEPGTGKTIFS 40 (235)
T ss_dssp ECSTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 599999999886
No 117
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=46.01 E-value=3.9 Score=36.51 Aligned_cols=12 Identities=33% Similarity=0.210 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+..
T Consensus 61 ~G~~GtGKT~la 72 (338)
T 3pfi_A 61 SGPAGLGKTTLA 72 (338)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 799999999887
No 118
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=45.90 E-value=4.5 Score=34.29 Aligned_cols=11 Identities=55% Similarity=0.739 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 73 a~TGsGKT~~~ 83 (245)
T 3dkp_A 73 APTGSGKTLAF 83 (245)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCcHHHHH
Confidence 58999999873
No 119
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=45.85 E-value=4.7 Score=35.78 Aligned_cols=12 Identities=33% Similarity=0.401 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+++
T Consensus 54 ~G~~G~GKT~la 65 (324)
T 3u61_B 54 SPSPGTGKTTVA 65 (324)
T ss_dssp CSSTTSSHHHHH
T ss_pred eCcCCCCHHHHH
Confidence 688999999988
No 120
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=45.79 E-value=4.4 Score=37.39 Aligned_cols=11 Identities=36% Similarity=0.797 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.||||||++|
T Consensus 42 G~~G~GKs~~~ 52 (392)
T 4ag6_A 42 AKPGAGKSFTA 52 (392)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCCCHHHHH
Confidence 89999999988
No 121
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=45.57 E-value=4 Score=35.74 Aligned_cols=12 Identities=33% Similarity=0.299 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||++.
T Consensus 52 ~G~~G~GKT~la 63 (327)
T 1iqp_A 52 AGPPGVGKTTAA 63 (327)
T ss_dssp ESCTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 799999999987
No 122
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=44.97 E-value=4.7 Score=33.86 Aligned_cols=11 Identities=36% Similarity=0.386 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|+|||.++
T Consensus 8 G~nG~GKTTll 18 (189)
T 2i3b_A 8 GPPGVGKTTLI 18 (189)
T ss_dssp SCCSSCHHHHH
T ss_pred CCCCChHHHHH
Confidence 89999999988
No 123
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=44.84 E-value=4.6 Score=37.08 Aligned_cols=11 Identities=55% Similarity=0.537 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|+|||.|+
T Consensus 136 G~nGaGKTTll 146 (328)
T 3e70_C 136 GFNGSGKTTTI 146 (328)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999988
No 124
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=44.75 E-value=4.1 Score=33.67 Aligned_cols=11 Identities=45% Similarity=0.250 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 13 G~~GsGKSTl~ 23 (211)
T 3asz_A 13 GGTASGKTTLA 23 (211)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 125
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=44.58 E-value=3.7 Score=36.66 Aligned_cols=12 Identities=42% Similarity=0.448 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||+.+
T Consensus 51 ~G~~G~GKTtl~ 62 (386)
T 2qby_A 51 YGLTGTGKTAVV 62 (386)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999987
No 126
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=44.40 E-value=4.1 Score=32.94 Aligned_cols=11 Identities=36% Similarity=0.419 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+.+
T Consensus 16 G~~GsGKSTl~ 26 (191)
T 1zp6_A 16 GHPGSGKSTIA 26 (191)
T ss_dssp ECTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 127
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=43.98 E-value=4.9 Score=37.55 Aligned_cols=11 Identities=36% Similarity=0.495 Sum_probs=10.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.|+
T Consensus 164 G~nGsGKTTll 174 (359)
T 2og2_A 164 GVNGGGKTTSL 174 (359)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCChHHHHH
Confidence 89999999998
No 128
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=43.75 E-value=5.1 Score=34.84 Aligned_cols=11 Identities=55% Similarity=0.791 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 98 a~TGsGKT~~~ 108 (262)
T 3ly5_A 98 AKTGSGKTLAF 108 (262)
T ss_dssp CCTTSCHHHHH
T ss_pred ccCCCCchHHH
Confidence 78999999873
No 129
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=43.72 E-value=5.2 Score=31.17 Aligned_cols=11 Identities=36% Similarity=0.280 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 8 G~~GsGKsT~a 18 (179)
T 3lw7_A 8 GMPGSGKSEFA 18 (179)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999765
No 130
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=43.48 E-value=4.5 Score=36.49 Aligned_cols=12 Identities=50% Similarity=0.617 Sum_probs=10.9
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|.+|+|||+|+.
T Consensus 112 G~~GsGKTTl~~ 123 (296)
T 2px0_A 112 GSTGAGKTTTLA 123 (296)
T ss_dssp ESTTSSHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 889999999984
No 131
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=43.33 E-value=5.1 Score=34.69 Aligned_cols=11 Identities=36% Similarity=0.525 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 38 G~nGsGKSTLl 48 (235)
T 3tif_A 38 GPSGSGKSTML 48 (235)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999877
No 132
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=42.91 E-value=5.2 Score=34.49 Aligned_cols=11 Identities=55% Similarity=0.676 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 87 a~TGsGKT~~~ 97 (249)
T 3ber_A 87 AETGSGKTGAF 97 (249)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCCCchhHh
Confidence 58999999874
No 133
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=42.73 E-value=4.1 Score=36.70 Aligned_cols=12 Identities=42% Similarity=0.650 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 51 ~G~~G~GKT~la 62 (384)
T 2qby_B 51 LGLTGTGKTFVS 62 (384)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 134
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=42.70 E-value=5 Score=34.21 Aligned_cols=11 Identities=64% Similarity=0.761 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 67 a~TGsGKT~~~ 77 (253)
T 1wrb_A 67 AQTGSGKTAAF 77 (253)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCChHHHHH
Confidence 58999999864
No 135
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=42.64 E-value=4.7 Score=37.19 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=21.1
Q ss_pred CCCCcccccccccc------cc----C-CCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMGT------GF----E-TDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~G------~~----~-~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||.+|+|||+...- .. . ........|-....+..+|.....
T Consensus 154 ~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~~~~g~~~~~~~~~~~~a~~ 205 (389)
T 3vfd_A 154 FGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARE 205 (389)
T ss_dssp ESSTTSCHHHHHHHHHHHTTCEEEEECSCCC-------CHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHhhcCcEEEeeHHHhhccccchHHHHHHHHHHHHHh
Confidence 79999999988721 10 0 011112234445667777776654
No 136
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=42.64 E-value=5.4 Score=35.19 Aligned_cols=11 Identities=55% Similarity=0.752 Sum_probs=9.7
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 51 ~~TGsGKT~~~ 61 (367)
T 1hv8_A 51 ARTGSGKTASF 61 (367)
T ss_dssp CCSSSSHHHHH
T ss_pred CCCCChHHHHH
Confidence 68999999885
No 137
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=42.44 E-value=4.7 Score=33.76 Aligned_cols=12 Identities=25% Similarity=0.177 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|.+|+|||..+
T Consensus 30 ~G~~GsGKTtl~ 41 (243)
T 1n0w_A 30 FGEFRTGKTQIC 41 (243)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999987
No 138
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=42.33 E-value=4.8 Score=34.23 Aligned_cols=11 Identities=64% Similarity=0.800 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 73 apTGsGKT~~~ 83 (242)
T 3fe2_A 73 AQTGSGKTLSY 83 (242)
T ss_dssp ECTTSCHHHHH
T ss_pred CCCcCHHHHHH
Confidence 58999999874
No 139
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.19 E-value=16 Score=35.28 Aligned_cols=42 Identities=21% Similarity=0.304 Sum_probs=29.3
Q ss_pred CCCCccccccccc------cc-----cCCCCCCCCcChHHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TG-----FETDVSEEMLGIIPRAITHLFEGIQNI 42 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~-----~~~~~~~~~~GIiPRal~~LF~~~~~~ 42 (286)
||+.|+|||...- |- ..........|--.+.++.+|......
T Consensus 222 yGPPGTGKTlLAkAiA~e~~~~fi~v~~s~l~sk~vGesek~ir~lF~~Ar~~ 274 (437)
T 4b4t_I 222 YGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGEN 274 (437)
T ss_dssp ESSTTTTHHHHHHHHHHHHTCEEEEEESGGGCCSSSSHHHHHHHHHHHHHHHT
T ss_pred ECCCCchHHHHHHHHHHHhCCCEEEEEHHHhhhccCchHHHHHHHHHHHHHhc
Confidence 8999999997651 10 001123456788899999999998764
No 140
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=42.14 E-value=5.4 Score=39.60 Aligned_cols=12 Identities=42% Similarity=0.457 Sum_probs=10.8
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|+.|||||+|+.
T Consensus 202 GppGTGKT~~~~ 213 (624)
T 2gk6_A 202 GPPGTGKTVTSA 213 (624)
T ss_dssp CCTTSCHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 899999999974
No 141
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=42.04 E-value=6.4 Score=33.53 Aligned_cols=11 Identities=55% Similarity=0.694 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||+.|
T Consensus 29 G~nGsGKSTLl 39 (208)
T 3b85_A 29 GPAGSGKTYLA 39 (208)
T ss_dssp CCTTSSTTHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 142
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=42.00 E-value=4.4 Score=33.77 Aligned_cols=11 Identities=55% Similarity=0.658 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 48 a~TGsGKT~~~ 58 (219)
T 1q0u_A 48 SQTGTGKTHAY 58 (219)
T ss_dssp CCSSHHHHHHH
T ss_pred CCCCChHHHHH
Confidence 68999999874
No 143
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=41.92 E-value=4.8 Score=33.30 Aligned_cols=12 Identities=42% Similarity=0.393 Sum_probs=10.6
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|++|||||..+
T Consensus 31 ~G~nGsGKSTll 42 (231)
T 4a74_A 31 FGEFGSGKTQLA 42 (231)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 489999999887
No 144
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=41.53 E-value=5.1 Score=38.02 Aligned_cols=12 Identities=33% Similarity=0.307 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 69 ~GppGtGKT~la 80 (456)
T 2c9o_A 69 AGPPGTGKTALA 80 (456)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCcCCHHHHH
Confidence 799999999876
No 145
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=41.43 E-value=5.8 Score=33.42 Aligned_cols=11 Identities=36% Similarity=0.706 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 68 a~TGsGKT~~~ 78 (230)
T 2oxc_A 68 AKSGTGKTCVF 78 (230)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 58999999873
No 146
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=41.22 E-value=5.7 Score=34.65 Aligned_cols=12 Identities=25% Similarity=0.487 Sum_probs=10.5
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
++||+|||.+..
T Consensus 135 ~~tGsGKT~~~~ 146 (282)
T 1rif_A 135 LPTSAGRSLIQA 146 (282)
T ss_dssp CCTTSCHHHHHH
T ss_pred cCCCCCcHHHHH
Confidence 689999999874
No 147
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=41.10 E-value=5.1 Score=38.00 Aligned_cols=12 Identities=33% Similarity=0.620 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 173 ~GppGtGKT~lA 184 (444)
T 2zan_A 173 FGPPGTGKSYLA 184 (444)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 148
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.92 E-value=5.3 Score=38.40 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=28.8
Q ss_pred CCCCccccccccc------cc-----cCCCCCCCCcChHHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TG-----FETDVSEEMLGIIPRAITHLFEGIQNI 42 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~-----~~~~~~~~~~GIiPRal~~LF~~~~~~ 42 (286)
||+.|+|||+..- |- ........-.|--.+.+..+|......
T Consensus 221 ~GPPGtGKTllAkAiA~e~~~~~~~v~~s~l~sk~~Gese~~ir~~F~~A~~~ 273 (437)
T 4b4t_L 221 YGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEH 273 (437)
T ss_dssp ESCTTSSHHHHHHHHHHHHTCEEEEEEGGGTCCSSSSHHHHHHHHHHHHHHHS
T ss_pred ECCCCCcHHHHHHHHHHHhCCCEEEEehhhhccccchHHHHHHHHHHHHHHhc
Confidence 8999999998761 10 001123355688889999999988664
No 149
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=40.69 E-value=5.2 Score=37.35 Aligned_cols=12 Identities=33% Similarity=0.432 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|.||||||.+|
T Consensus 59 ~G~tGsGKs~~~ 70 (437)
T 1e9r_A 59 NGATGTGKSVLL 70 (437)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 389999999987
No 150
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=40.24 E-value=5.1 Score=35.01 Aligned_cols=13 Identities=23% Similarity=0.179 Sum_probs=11.6
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||+.|+|||+...
T Consensus 64 ~GPPGtGKTt~a~ 76 (212)
T 1tue_A 64 CGPANTGKSYFGM 76 (212)
T ss_dssp ESCGGGCHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 8999999998864
No 151
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=39.83 E-value=4.3 Score=33.75 Aligned_cols=14 Identities=29% Similarity=0.064 Sum_probs=12.0
Q ss_pred CCCCcccccccccc
Q psy15014 1 MLQTGSGKTYTMGT 14 (286)
Q Consensus 1 YGqTGSGKTyTm~G 14 (286)
||..|+|||+.+.+
T Consensus 9 ~G~~gsGKTT~ll~ 22 (184)
T 2orw_A 9 TGPMYSGKTTELLS 22 (184)
T ss_dssp EESTTSSHHHHHHH
T ss_pred ECCCCCCHHHHHHH
Confidence 68999999999864
No 152
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=39.49 E-value=6.3 Score=34.33 Aligned_cols=12 Identities=50% Similarity=0.628 Sum_probs=10.0
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
++||||||.+..
T Consensus 38 ~~TGsGKT~~~~ 49 (337)
T 2z0m_A 38 AKTGSGKTAAYA 49 (337)
T ss_dssp CCTTSSHHHHHH
T ss_pred cCCCCcHHHHHH
Confidence 689999998763
No 153
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=39.16 E-value=5.1 Score=34.81 Aligned_cols=14 Identities=21% Similarity=-0.040 Sum_probs=12.0
Q ss_pred CCCCcccccccccc
Q psy15014 1 MLQTGSGKTYTMGT 14 (286)
Q Consensus 1 YGqTGSGKTyTm~G 14 (286)
||..|+|||..+.+
T Consensus 18 tG~mGsGKTT~ll~ 31 (223)
T 2b8t_A 18 TGPMFAGKTAELIR 31 (223)
T ss_dssp ECSTTSCHHHHHHH
T ss_pred ECCCCCcHHHHHHH
Confidence 69999999988864
No 154
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=39.06 E-value=5.2 Score=33.83 Aligned_cols=14 Identities=21% Similarity=0.031 Sum_probs=11.7
Q ss_pred CCCCcccccccccc
Q psy15014 1 MLQTGSGKTYTMGT 14 (286)
Q Consensus 1 YGqTGSGKTyTm~G 14 (286)
||..|||||..+.+
T Consensus 14 ~G~mgsGKTT~ll~ 27 (191)
T 1xx6_A 14 VGPMYSGKSEELIR 27 (191)
T ss_dssp ECSTTSSHHHHHHH
T ss_pred ECCCCCcHHHHHHH
Confidence 68999999988764
No 155
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=38.96 E-value=6.1 Score=35.45 Aligned_cols=12 Identities=25% Similarity=0.385 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+..
T Consensus 31 ~Ge~GtGKt~lA 42 (304)
T 1ojl_A 31 HGDSGTGKELVA 42 (304)
T ss_dssp ESCTTSCHHHHH
T ss_pred ECCCCchHHHHH
Confidence 699999999876
No 156
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=38.89 E-value=6.7 Score=34.99 Aligned_cols=11 Identities=45% Similarity=0.682 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||...
T Consensus 138 a~TGsGKT~a~ 148 (300)
T 3fmo_B 138 SQSGTGKTAAF 148 (300)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCccHHH
Confidence 68999999874
No 157
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=38.12 E-value=6.1 Score=35.37 Aligned_cols=12 Identities=33% Similarity=0.243 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||.++
T Consensus 44 ~G~~G~GKT~la 55 (373)
T 1jr3_A 44 SGTRGVGKTSIA 55 (373)
T ss_dssp ESCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 158
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=38.11 E-value=6.8 Score=35.57 Aligned_cols=12 Identities=42% Similarity=0.565 Sum_probs=10.8
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|++|+|||.|+.
T Consensus 111 G~~GsGKTTl~~ 122 (306)
T 1vma_A 111 GVNGTGKTTSCG 122 (306)
T ss_dssp CCTTSSHHHHHH
T ss_pred cCCCChHHHHHH
Confidence 899999999983
No 159
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=37.90 E-value=7.6 Score=35.05 Aligned_cols=11 Identities=55% Similarity=0.767 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 84 a~TGsGKT~~~ 94 (414)
T 3eiq_A 84 AQSGTGKTATF 94 (414)
T ss_dssp CCSCSSSHHHH
T ss_pred CCCCCcccHHH
Confidence 68999999874
No 160
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=37.83 E-value=6.9 Score=35.52 Aligned_cols=11 Identities=27% Similarity=0.199 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 97 G~sGsGKSTL~ 107 (312)
T 3aez_A 97 GSVAVGKSTTA 107 (312)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCchHHHHH
Confidence 89999999887
No 161
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=37.82 E-value=6.9 Score=34.84 Aligned_cols=11 Identities=45% Similarity=0.682 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 51 a~TGsGKT~~~ 61 (395)
T 3pey_A 51 SQSGTGKTAAF 61 (395)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCcHHHHH
Confidence 58999999864
No 162
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=37.76 E-value=6.2 Score=34.39 Aligned_cols=12 Identities=33% Similarity=0.324 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||+..
T Consensus 48 ~G~~G~GKt~la 59 (323)
T 1sxj_B 48 SGMPGIGKTTSV 59 (323)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECcCCCCHHHHH
Confidence 799999999886
No 163
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=37.74 E-value=7.1 Score=31.81 Aligned_cols=11 Identities=36% Similarity=0.347 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+.|+|||..+
T Consensus 40 G~nGaGKTTLl 50 (158)
T 1htw_A 40 GDLGAGKTTLT 50 (158)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999877
No 164
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=37.64 E-value=6.2 Score=33.21 Aligned_cols=12 Identities=42% Similarity=0.584 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|||||..|
T Consensus 29 ~G~NgsGKStil 40 (203)
T 3qks_A 29 IGQNGSGKSSLL 40 (203)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 699999999877
No 165
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=37.38 E-value=6.1 Score=38.40 Aligned_cols=12 Identities=42% Similarity=0.515 Sum_probs=10.5
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
++||||||.+++
T Consensus 205 ~~TGsGKT~~~~ 216 (590)
T 3h1t_A 205 MATGTGKTVVAF 216 (590)
T ss_dssp ECTTSCHHHHHH
T ss_pred ecCCCChHHHHH
Confidence 589999999974
No 166
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=37.15 E-value=7.2 Score=34.81 Aligned_cols=11 Identities=27% Similarity=0.317 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 41 GpnGsGKSTLl 51 (275)
T 3gfo_A 41 GGNGVGKSTLF 51 (275)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 167
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=37.12 E-value=7.2 Score=34.51 Aligned_cols=11 Identities=27% Similarity=0.440 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 44 G~nGsGKSTLl 54 (266)
T 4g1u_C 44 GPNGAGKSTLL 54 (266)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999987
No 168
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=37.04 E-value=6.5 Score=37.57 Aligned_cols=12 Identities=33% Similarity=0.307 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 56 ~GppGtGKTtlA 67 (447)
T 3pvs_A 56 WGPPGTGKTTLA 67 (447)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 799999999887
No 169
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=37.00 E-value=6.4 Score=32.32 Aligned_cols=13 Identities=31% Similarity=0.003 Sum_probs=10.9
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
+|.+|+|||..+.
T Consensus 26 ~G~~GsGKTtl~~ 38 (220)
T 2cvh_A 26 YGPYASGKTTLAL 38 (220)
T ss_dssp ECSTTSSHHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 5899999998773
No 170
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=36.98 E-value=7.4 Score=33.34 Aligned_cols=11 Identities=36% Similarity=0.253 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 32 G~~GsGKSTl~ 42 (245)
T 2jeo_A 32 GGTASGKSTVC 42 (245)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 171
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=36.88 E-value=7.7 Score=35.12 Aligned_cols=12 Identities=33% Similarity=0.357 Sum_probs=11.2
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||..|+|||..+
T Consensus 58 ~G~~G~GKT~L~ 69 (412)
T 1w5s_A 58 IGRVGIGKTTLA 69 (412)
T ss_dssp TTCCSSSHHHHH
T ss_pred cCcCCCCHHHHH
Confidence 799999999987
No 172
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=36.82 E-value=6.6 Score=38.05 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=23.3
Q ss_pred CCCCcccccccccc--c-cCC--------CCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMGT--G-FET--------DVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~G--~-~~~--------~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||.+|+|||+..-- . ... .....-.|-....+..+|.....
T Consensus 244 ~GppGtGKT~lAraia~~~~~~fv~vn~~~l~~~~~g~~~~~~~~~f~~A~~ 295 (489)
T 3hu3_A 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK 295 (489)
T ss_dssp ECSTTSSHHHHHHHHHHHCSSEEEEEEHHHHHTSCTTHHHHHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHHhCCCEEEEEchHhhhhhcchhHHHHHHHHHHHHh
Confidence 79999999988721 0 000 00112335556667777776544
No 173
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=36.51 E-value=9.7 Score=35.95 Aligned_cols=10 Identities=50% Similarity=0.767 Sum_probs=9.2
Q ss_pred CCCccccccc
Q psy15014 2 LQTGSGKTYT 11 (286)
Q Consensus 2 GqTGSGKTyT 11 (286)
++||||||..
T Consensus 26 a~TGsGKT~~ 35 (451)
T 2jlq_A 26 LHPGAGKTKR 35 (451)
T ss_dssp CCTTSSCCTT
T ss_pred CCCCCCHhhH
Confidence 7899999997
No 174
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=35.78 E-value=8.3 Score=30.49 Aligned_cols=11 Identities=36% Similarity=0.223 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 9 G~~GsGKST~a 19 (181)
T 1ly1_A 9 GCPGSGKSTWA 19 (181)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCCCHHHHH
Confidence 89999999854
No 175
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=35.75 E-value=7.8 Score=33.73 Aligned_cols=11 Identities=36% Similarity=0.498 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 31 G~nGsGKSTLl 41 (240)
T 2onk_A 31 GPTGAGKSVFL 41 (240)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999877
No 176
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=35.75 E-value=7.8 Score=33.20 Aligned_cols=11 Identities=27% Similarity=0.558 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 23 GpsGsGKSTLl 33 (219)
T 1s96_A 23 APSGAGKSSLI 33 (219)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999877
No 177
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=35.71 E-value=6.9 Score=33.55 Aligned_cols=11 Identities=36% Similarity=0.504 Sum_probs=10.0
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 37 G~nGsGKSTLl 47 (224)
T 2pcj_A 37 GASGSGKSTLL 47 (224)
T ss_dssp ECTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 178
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=35.63 E-value=10 Score=35.77 Aligned_cols=11 Identities=36% Similarity=0.694 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||...
T Consensus 15 a~TGSGKT~~~ 25 (440)
T 1yks_A 15 FHPGAGKTRRF 25 (440)
T ss_dssp CCTTSSTTTTH
T ss_pred cCCCCCHHHHH
Confidence 78999999984
No 179
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=35.56 E-value=7.9 Score=32.21 Aligned_cols=12 Identities=42% Similarity=0.207 Sum_probs=10.2
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|.+|||||..+.
T Consensus 11 G~sGsGKTTl~~ 22 (169)
T 1xjc_A 11 GYKHSGKTTLME 22 (169)
T ss_dssp CCTTSSHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 789999998774
No 180
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=35.56 E-value=7.9 Score=35.05 Aligned_cols=11 Identities=64% Similarity=0.761 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 59 a~TGsGKT~~~ 69 (417)
T 2i4i_A 59 AQTGSGKTAAF 69 (417)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCCHHHHHH
Confidence 68999999764
No 181
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=35.46 E-value=8.4 Score=30.49 Aligned_cols=11 Identities=27% Similarity=0.238 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 11 G~~GsGKSTl~ 21 (173)
T 1kag_A 11 GPMGAGKSTIG 21 (173)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 182
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=35.41 E-value=8.4 Score=30.63 Aligned_cols=11 Identities=18% Similarity=0.181 Sum_probs=9.7
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||...
T Consensus 10 G~~GsGKST~a 20 (178)
T 1qhx_A 10 GGSSAGKSGIV 20 (178)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999765
No 183
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=35.39 E-value=8.1 Score=33.46 Aligned_cols=11 Identities=45% Similarity=0.585 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 39 G~nGsGKSTLl 49 (240)
T 1ji0_A 39 GANGAGKTTTL 49 (240)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 184
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=35.32 E-value=8.1 Score=33.81 Aligned_cols=11 Identities=36% Similarity=0.465 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 40 G~nGsGKSTLl 50 (257)
T 1g6h_A 40 GPNGSGKSTLI 50 (257)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 185
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=35.20 E-value=7.3 Score=37.62 Aligned_cols=12 Identities=33% Similarity=0.290 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+++
T Consensus 83 ~GppGtGKTtla 94 (516)
T 1sxj_A 83 YGPPGIGKTTAA 94 (516)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 186
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=35.13 E-value=7.4 Score=37.94 Aligned_cols=12 Identities=33% Similarity=0.302 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 70 ~GppGtGKTtLa 81 (499)
T 2dhr_A 70 VGPPGVGKTHLA 81 (499)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999987
No 187
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=35.01 E-value=7 Score=35.98 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=10.4
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|.||+|||--+
T Consensus 31 ~G~NGaGKT~il 42 (371)
T 3auy_A 31 IGENGSGKSSIF 42 (371)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999765
No 188
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=34.99 E-value=11 Score=35.51 Aligned_cols=11 Identities=45% Similarity=0.754 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||...
T Consensus 9 a~TGsGKT~~~ 19 (431)
T 2v6i_A 9 LHPGAGKTRRV 19 (431)
T ss_dssp CCTTSCTTTTH
T ss_pred cCCCCCHHHHH
Confidence 78999999984
No 189
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=34.86 E-value=8.3 Score=33.95 Aligned_cols=11 Identities=36% Similarity=0.489 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 39 G~nGsGKSTLl 49 (262)
T 1b0u_A 39 GSSGSGKSTFL 49 (262)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999977
No 190
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=34.84 E-value=8.3 Score=33.05 Aligned_cols=11 Identities=36% Similarity=0.383 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 42 G~NGsGKSTLl 52 (214)
T 1sgw_A 42 GPNGIGKTTLL 52 (214)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 191
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=34.67 E-value=8 Score=34.86 Aligned_cols=11 Identities=36% Similarity=0.643 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 65 a~TGsGKT~~~ 75 (400)
T 1s2m_A 65 AKNGTGKTAAF 75 (400)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCcHHHHHH
Confidence 68999999764
No 192
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=34.64 E-value=7.5 Score=33.41 Aligned_cols=12 Identities=58% Similarity=0.584 Sum_probs=10.5
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|+||+|||+...
T Consensus 115 ~~tG~GKT~~a~ 126 (237)
T 2fz4_A 115 LPTGSGKTHVAM 126 (237)
T ss_dssp ESSSTTHHHHHH
T ss_pred eCCCCCHHHHHH
Confidence 789999999874
No 193
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=34.55 E-value=8.8 Score=36.00 Aligned_cols=10 Identities=50% Similarity=0.697 Sum_probs=9.1
Q ss_pred CCCccccccc
Q psy15014 2 LQTGSGKTYT 11 (286)
Q Consensus 2 GqTGSGKTyT 11 (286)
++||||||..
T Consensus 138 a~TGsGKT~~ 147 (479)
T 3fmp_B 138 SQSGTGKTAA 147 (479)
T ss_dssp CCSSSSHHHH
T ss_pred cCCCCchhHH
Confidence 7899999977
No 194
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=34.48 E-value=8.5 Score=31.71 Aligned_cols=11 Identities=36% Similarity=0.356 Sum_probs=9.7
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 32 G~sGsGKSTl~ 42 (200)
T 3uie_A 32 GLSGSGKSTLA 42 (200)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999765
No 195
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=34.18 E-value=11 Score=35.68 Aligned_cols=11 Identities=55% Similarity=0.824 Sum_probs=9.7
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||...
T Consensus 28 a~TGsGKT~~~ 38 (459)
T 2z83_A 28 LHPGSGKTRKI 38 (459)
T ss_dssp CCTTSCTTTTH
T ss_pred CCCCCCHHHHH
Confidence 78999999983
No 196
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=34.17 E-value=8.6 Score=34.85 Aligned_cols=11 Identities=55% Similarity=0.740 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 81 a~TGsGKT~~~ 91 (410)
T 2j0s_A 81 SQSGTGKTATF 91 (410)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCchHHH
Confidence 68999999765
No 197
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=34.14 E-value=8.7 Score=33.49 Aligned_cols=11 Identities=36% Similarity=0.453 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 42 G~nGsGKSTLl 52 (247)
T 2ff7_A 42 GRSGSGKSTLT 52 (247)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999977
No 198
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=33.93 E-value=9.3 Score=30.66 Aligned_cols=11 Identities=36% Similarity=0.244 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+.-
T Consensus 12 G~~GsGKst~a 22 (185)
T 3trf_A 12 GLMGAGKTSVG 22 (185)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999765
No 199
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=33.82 E-value=8.8 Score=36.18 Aligned_cols=11 Identities=27% Similarity=0.440 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.+|
T Consensus 36 GpsGsGKSTLL 46 (381)
T 3rlf_A 36 GPSGCGKSTLL 46 (381)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCchHHHHH
Confidence 89999999987
No 200
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=33.53 E-value=9 Score=30.51 Aligned_cols=11 Identities=36% Similarity=0.389 Sum_probs=9.8
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||..+
T Consensus 15 G~~GsGKSTl~ 25 (175)
T 1knq_A 15 GVSGSGKSAVA 25 (175)
T ss_dssp CSTTSCHHHHH
T ss_pred cCCCCCHHHHH
Confidence 89999999875
No 201
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=33.48 E-value=9 Score=33.17 Aligned_cols=11 Identities=27% Similarity=0.435 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 35 G~nGsGKSTLl 45 (243)
T 1mv5_A 35 GPSGGGKSTIF 45 (243)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 202
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=33.46 E-value=9.1 Score=33.72 Aligned_cols=11 Identities=45% Similarity=0.561 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 40 G~nGsGKSTLl 50 (266)
T 2yz2_A 40 GNTGSGKSTLL 50 (266)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999887
No 203
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=33.45 E-value=9.2 Score=34.39 Aligned_cols=11 Identities=45% Similarity=0.682 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||...
T Consensus 71 apTGsGKT~~~ 81 (412)
T 3fht_A 71 SQSGTGKTAAF 81 (412)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCchHHHHH
Confidence 68999999873
No 204
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=33.30 E-value=9.1 Score=32.88 Aligned_cols=11 Identities=45% Similarity=0.543 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 41 G~nGsGKSTLl 51 (229)
T 2pze_A 41 GSTGAGKTSLL 51 (229)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999877
No 205
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=33.12 E-value=9.3 Score=33.05 Aligned_cols=11 Identities=36% Similarity=0.483 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 38 G~nGsGKSTLl 48 (237)
T 2cbz_A 38 GQVGCGKSSLL 48 (237)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 206
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=33.06 E-value=10 Score=36.29 Aligned_cols=11 Identities=45% Similarity=0.682 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 165 apTGsGKT~~~ 175 (508)
T 3fho_A 165 SQSGTGKTAAF 175 (508)
T ss_dssp CCSSTTSHHHH
T ss_pred CCCCccHHHHH
Confidence 68999999973
No 207
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=33.02 E-value=8.3 Score=34.13 Aligned_cols=11 Identities=36% Similarity=0.425 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|+|||..|
T Consensus 9 G~nGaGKSTLl 19 (270)
T 3sop_A 9 GQSGLGKSTLV 19 (270)
T ss_dssp ESSSSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 208
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=33.01 E-value=5.5 Score=32.98 Aligned_cols=19 Identities=5% Similarity=-0.055 Sum_probs=14.4
Q ss_pred ccEEEEcCCHHHHHHHHHH
Q psy15014 207 GATSKSIRSAQEAMNALRQ 225 (286)
Q Consensus 207 gl~~~~V~S~eea~~lL~~ 225 (286)
++....+++.+++.++|..
T Consensus 140 ~~~~f~~~~~~~~a~~i~~ 158 (171)
T 2f1r_A 140 GHKWFRRDEVERIAEFILS 158 (171)
T ss_dssp SSCEECTTCHHHHHHHHHH
T ss_pred cCcccCcccHHHHHHHHHH
Confidence 4556777888998888854
No 209
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=32.92 E-value=8.1 Score=32.00 Aligned_cols=11 Identities=36% Similarity=0.157 Sum_probs=9.8
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 29 G~~GsGKstl~ 39 (201)
T 1rz3_A 29 GLSRSGKTTLA 39 (201)
T ss_dssp ECTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999876
No 210
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=32.90 E-value=9.4 Score=35.59 Aligned_cols=11 Identities=45% Similarity=0.585 Sum_probs=10.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 36 GpnGsGKSTLL 46 (359)
T 2yyz_A 36 GPSGCGKTTTL 46 (359)
T ss_dssp CSTTSSHHHHH
T ss_pred cCCCchHHHHH
Confidence 89999999988
No 211
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=32.89 E-value=9.3 Score=33.62 Aligned_cols=11 Identities=45% Similarity=0.585 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 48 G~NGsGKSTLl 58 (256)
T 1vpl_A 48 GPNGAGKTTTL 58 (256)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 212
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=32.83 E-value=10 Score=29.70 Aligned_cols=11 Identities=9% Similarity=-0.287 Sum_probs=9.7
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 8 G~~GsGKsT~~ 18 (173)
T 3kb2_A 8 GPDCCFKSTVA 18 (173)
T ss_dssp CSSSSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999865
No 213
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=32.82 E-value=9.3 Score=35.03 Aligned_cols=11 Identities=27% Similarity=0.178 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+++
T Consensus 99 GpsGSGKSTl~ 109 (321)
T 3tqc_A 99 GSVAVGKSTTS 109 (321)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 214
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=32.72 E-value=9.9 Score=33.01 Aligned_cols=10 Identities=50% Similarity=0.235 Sum_probs=9.0
Q ss_pred CCCccccccc
Q psy15014 2 LQTGSGKTYT 11 (286)
Q Consensus 2 GqTGSGKTyT 11 (286)
|.+|||||..
T Consensus 8 G~~GSGKSTl 17 (253)
T 2ze6_A 8 GPTCSGKTDM 17 (253)
T ss_dssp CCTTSSHHHH
T ss_pred CCCCcCHHHH
Confidence 8999999975
No 215
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=32.58 E-value=9.5 Score=37.44 Aligned_cols=11 Identities=45% Similarity=0.474 Sum_probs=10.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||.++
T Consensus 300 GpNGSGKTTLl 310 (503)
T 2yhs_A 300 GVNGVGKTTTI 310 (503)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCcccHHHHH
Confidence 89999999998
No 216
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=32.47 E-value=9.6 Score=32.31 Aligned_cols=13 Identities=46% Similarity=0.445 Sum_probs=11.0
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
.|..|||||+.+.
T Consensus 11 tG~pGsGKT~~a~ 23 (199)
T 2r2a_A 11 TGTPGSGKTLKMV 23 (199)
T ss_dssp ECCTTSSHHHHHH
T ss_pred EeCCCCCHHHHHH
Confidence 4899999999774
No 217
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=32.47 E-value=9.6 Score=33.17 Aligned_cols=11 Identities=27% Similarity=0.250 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 36 G~nGsGKSTLl 46 (250)
T 2d2e_A 36 GPNGAGKSTLG 46 (250)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 218
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=32.34 E-value=9.6 Score=31.39 Aligned_cols=11 Identities=45% Similarity=0.410 Sum_probs=9.8
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||..+
T Consensus 36 G~~GsGKSTl~ 46 (200)
T 4eun_A 36 GVSGSGKTTIA 46 (200)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999875
No 219
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=32.30 E-value=9.7 Score=35.45 Aligned_cols=11 Identities=45% Similarity=0.555 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 48 GpnGsGKSTLL 58 (355)
T 1z47_A 48 GPSGSGKTTIL 58 (355)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999987
No 220
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=32.21 E-value=9.8 Score=33.43 Aligned_cols=11 Identities=45% Similarity=0.492 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 53 G~nGsGKSTLl 63 (260)
T 2ghi_A 53 GHTGSGKSTIA 63 (260)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 221
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=32.18 E-value=9.9 Score=33.42 Aligned_cols=12 Identities=50% Similarity=0.692 Sum_probs=10.6
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|..|+||||+|.
T Consensus 13 ~kgGvGKTt~a~ 24 (228)
T 2r8r_A 13 AAPGVGKTYAML 24 (228)
T ss_dssp SSTTSSHHHHHH
T ss_pred CCCCCcHHHHHH
Confidence 678999999984
No 222
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=31.99 E-value=10 Score=30.21 Aligned_cols=11 Identities=27% Similarity=0.220 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 10 G~~GsGKsT~~ 20 (192)
T 1kht_A 10 GVPGVGSTTSS 20 (192)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999764
No 223
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=31.85 E-value=9.9 Score=39.21 Aligned_cols=12 Identities=42% Similarity=0.457 Sum_probs=10.8
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|..|||||+|+.
T Consensus 378 GppGTGKT~ti~ 389 (800)
T 2wjy_A 378 GPPGTGKTVTSA 389 (800)
T ss_dssp CCTTSCHHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 899999999974
No 224
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=31.85 E-value=9.9 Score=32.40 Aligned_cols=11 Identities=36% Similarity=0.311 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+.+
T Consensus 34 G~~GsGKSTl~ 44 (246)
T 2bbw_A 34 GPPGSGKGTVC 44 (246)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999877
No 225
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=31.76 E-value=10 Score=34.07 Aligned_cols=12 Identities=33% Similarity=0.504 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|.+|||||.-|
T Consensus 30 ~G~NGsGKS~ll 41 (322)
T 1e69_A 30 VGPNGSGKSNII 41 (322)
T ss_dssp ECCTTTCSTHHH
T ss_pred ECCCCCcHHHHH
Confidence 599999999877
No 226
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=31.76 E-value=10 Score=33.60 Aligned_cols=11 Identities=36% Similarity=0.477 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 57 G~NGsGKSTLl 67 (263)
T 2olj_A 57 GPSGSGKSTFL 67 (263)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCCcHHHHH
Confidence 89999999987
No 227
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=31.62 E-value=10 Score=35.42 Aligned_cols=11 Identities=36% Similarity=0.504 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 36 GpnGsGKSTLL 46 (362)
T 2it1_A 36 GPSGSGKSTLL 46 (362)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCchHHHHH
Confidence 89999999987
No 228
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=31.61 E-value=8.9 Score=34.36 Aligned_cols=11 Identities=27% Similarity=0.199 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 87 G~~GsGKSTl~ 97 (308)
T 1sq5_A 87 GSVAVGKSTTA 97 (308)
T ss_dssp ECTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 229
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=31.58 E-value=10 Score=31.36 Aligned_cols=11 Identities=27% Similarity=0.320 Sum_probs=9.8
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..+
T Consensus 19 G~sGsGKsTl~ 29 (204)
T 2qor_A 19 GPSGVGKGTLI 29 (204)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999865
No 230
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=31.55 E-value=9 Score=35.80 Aligned_cols=11 Identities=36% Similarity=0.471 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.+|
T Consensus 37 GpsGsGKSTLL 47 (359)
T 3fvq_A 37 GASGCGKTTLL 47 (359)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCchHHHHH
Confidence 89999999987
No 231
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=31.44 E-value=10 Score=33.17 Aligned_cols=11 Identities=36% Similarity=0.498 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 38 G~nGsGKSTLl 48 (253)
T 2nq2_C 38 GQNGCGKSTLL 48 (253)
T ss_dssp CCSSSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 232
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=31.34 E-value=10 Score=35.41 Aligned_cols=11 Identities=45% Similarity=0.585 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 36 GpnGsGKSTLL 46 (372)
T 1g29_1 36 GPSGCGKTTTL 46 (372)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCcHHHHHH
Confidence 89999999988
No 233
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=31.16 E-value=11 Score=31.26 Aligned_cols=11 Identities=27% Similarity=0.280 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+..
T Consensus 12 G~~GsGKSTl~ 22 (227)
T 1cke_A 12 GPSGAGKGTLC 22 (227)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 234
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=31.12 E-value=9.9 Score=35.48 Aligned_cols=12 Identities=58% Similarity=0.584 Sum_probs=10.4
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
+.||+|||.+..
T Consensus 115 ~~TGsGKT~~~l 126 (472)
T 2fwr_A 115 LPTGSGKTHVAM 126 (472)
T ss_dssp CCTTSCHHHHHH
T ss_pred eCCCCCHHHHHH
Confidence 689999999873
No 235
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=31.06 E-value=9.6 Score=37.23 Aligned_cols=12 Identities=33% Similarity=0.246 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+.+
T Consensus 114 ~Gp~GtGKTtla 125 (543)
T 3m6a_A 114 AGPPGVGKTSLA 125 (543)
T ss_dssp ESSSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999876
No 236
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=31.02 E-value=8.3 Score=34.45 Aligned_cols=11 Identities=55% Similarity=0.712 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 65 ~~TGsGKT~~~ 75 (394)
T 1fuu_A 65 AQSGTGKTGTF 75 (394)
T ss_dssp CCSSHHHHHHH
T ss_pred CCCCChHHHHH
Confidence 68999999874
No 237
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=30.97 E-value=11 Score=31.03 Aligned_cols=11 Identities=45% Similarity=0.362 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 9 G~~GsGKST~~ 19 (206)
T 1jjv_A 9 GGIGSGKTTIA 19 (206)
T ss_dssp CSTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 238
>2w00_A HSDR, R.ECOR124I; ATP-binding, DNA-binding, restriction system, helicase, HYDR R.ECOR124I, nucleotide-binding; HET: ATP; 2.6A {Escherichia coli} PDB: 2y3t_A* 2w74_B*
Probab=30.91 E-value=9.8 Score=40.51 Aligned_cols=11 Identities=64% Similarity=0.591 Sum_probs=9.9
Q ss_pred CCccccccccc
Q psy15014 3 QTGSGKTYTMG 13 (286)
Q Consensus 3 qTGSGKTyTm~ 13 (286)
+||||||+||+
T Consensus 308 ~TGSGKT~t~~ 318 (1038)
T 2w00_A 308 TTGSGKTLTSF 318 (1038)
T ss_dssp CTTSSHHHHHH
T ss_pred cCCCCHHHHHH
Confidence 69999999984
No 239
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=30.91 E-value=11 Score=33.36 Aligned_cols=11 Identities=36% Similarity=0.347 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 53 G~NGsGKSTLl 63 (267)
T 2zu0_C 53 GPNGSGKSTLS 63 (267)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 240
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=30.87 E-value=11 Score=33.71 Aligned_cols=11 Identities=36% Similarity=0.428 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 54 G~NGsGKSTLl 64 (279)
T 2ihy_A 54 GLNGAGKTTLL 64 (279)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999987
No 241
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=30.84 E-value=11 Score=33.72 Aligned_cols=11 Identities=36% Similarity=0.567 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||+|||.+.
T Consensus 52 a~TGsGKT~~~ 62 (391)
T 1xti_A 52 AKSGMGKTAVF 62 (391)
T ss_dssp CSSCSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 58999999875
No 242
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=30.84 E-value=11 Score=33.44 Aligned_cols=11 Identities=45% Similarity=0.504 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 37 G~NGsGKSTLl 47 (263)
T 2pjz_A 37 GPNGSGKTTLL 47 (263)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 243
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=30.83 E-value=9.4 Score=36.98 Aligned_cols=41 Identities=22% Similarity=0.316 Sum_probs=23.5
Q ss_pred CCCCccccccccc---cccC--------CCCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG---TGFE--------TDVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~---G~~~--------~~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+.+- +... ......-.|.-...+..+|.....
T Consensus 55 ~GppGtGKT~Laraia~~~~~~f~~is~~~~~~~~~g~~~~~~r~lf~~A~~ 106 (476)
T 2ce7_A 55 VGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKA 106 (476)
T ss_dssp ECCTTSSHHHHHHHHHHHHTCCEEEEEGGGTTTCCTTHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHcCCCeeeCCHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 7999999998761 1000 001122345556667777776654
No 244
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=30.68 E-value=8.4 Score=33.47 Aligned_cols=11 Identities=45% Similarity=0.576 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 34 GpnGsGKSTll 44 (227)
T 1qhl_A 34 GGNGAGKSTTM 44 (227)
T ss_dssp SCCSHHHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999987
No 245
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=30.62 E-value=10 Score=35.36 Aligned_cols=11 Identities=64% Similarity=0.761 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||...
T Consensus 100 a~TGsGKT~a~ 110 (434)
T 2db3_A 100 AQTGSGKTAAF 110 (434)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCchHHH
Confidence 58999999864
No 246
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=30.56 E-value=11 Score=31.28 Aligned_cols=20 Identities=5% Similarity=-0.024 Sum_probs=15.5
Q ss_pred ccEEEEcCCHHHHHHHHHHH
Q psy15014 207 GATSKSIRSAQEAMNALRQG 226 (286)
Q Consensus 207 gl~~~~V~S~eea~~lL~~G 226 (286)
++....+++.+++..++..-
T Consensus 149 ~~p~~~~~d~~~ia~~i~~~ 168 (174)
T 1np6_A 149 DVALLDINDVEGLADFVVEW 168 (174)
T ss_dssp SSEEEETTCHHHHHHHHHHH
T ss_pred CCCcCCccCHHHHHHHHHHH
Confidence 46677789999999988643
No 247
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=30.36 E-value=12 Score=30.05 Aligned_cols=12 Identities=33% Similarity=0.177 Sum_probs=10.3
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|..|||||+..
T Consensus 17 ~G~~GsGKst~~ 28 (180)
T 3iij_A 17 TGTPGVGKTTLG 28 (180)
T ss_dssp ECSTTSSHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 389999999876
No 248
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=30.21 E-value=11 Score=35.29 Aligned_cols=11 Identities=45% Similarity=0.585 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 44 GpnGsGKSTLL 54 (372)
T 1v43_A 44 GPSGCGKTTTL 54 (372)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCChHHHHH
Confidence 89999999988
No 249
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=30.12 E-value=11 Score=35.68 Aligned_cols=12 Identities=25% Similarity=0.487 Sum_probs=10.5
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|+||||||.+..
T Consensus 135 ~~tGsGKT~~~~ 146 (510)
T 2oca_A 135 LPTSAGRSLIQA 146 (510)
T ss_dssp CCSTTTHHHHHH
T ss_pred eCCCCCHHHHHH
Confidence 789999999974
No 250
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=30.01 E-value=11 Score=32.97 Aligned_cols=11 Identities=27% Similarity=0.440 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 33 G~NGsGKSTLl 43 (249)
T 2qi9_C 33 GPNGAGKSTLL 43 (249)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999887
No 251
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=29.88 E-value=11 Score=36.90 Aligned_cols=11 Identities=36% Similarity=0.425 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.||||||..+
T Consensus 174 G~TGSGKSt~L 184 (512)
T 2ius_A 174 GTTGSGASVGV 184 (512)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999865
No 252
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=29.80 E-value=12 Score=30.78 Aligned_cols=11 Identities=36% Similarity=0.202 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||...
T Consensus 32 G~~GsGKsTl~ 42 (199)
T 3vaa_A 32 GYMGAGKTTLG 42 (199)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCCCHHHHH
Confidence 89999999875
No 253
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=29.71 E-value=11 Score=38.73 Aligned_cols=12 Identities=42% Similarity=0.457 Sum_probs=10.8
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|..|||||+|+.
T Consensus 382 GppGTGKT~~i~ 393 (802)
T 2xzl_A 382 GPPGTGKTVTSA 393 (802)
T ss_dssp CSTTSSHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 899999999974
No 254
>3rc3_A ATP-dependent RNA helicase SUPV3L1, mitochondrial; SUV3, nucleus, hydrolase; HET: ANP; 2.08A {Homo sapiens} PDB: 3rc8_A
Probab=29.53 E-value=12 Score=37.86 Aligned_cols=11 Identities=55% Similarity=0.594 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||+.+
T Consensus 162 apTGSGKT~~a 172 (677)
T 3rc3_A 162 GPTNSGKTYHA 172 (677)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCCCHHHHH
Confidence 79999999854
No 255
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=29.49 E-value=12 Score=33.20 Aligned_cols=11 Identities=36% Similarity=0.407 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 52 G~nGsGKSTLl 62 (271)
T 2ixe_A 52 GPNGSGKSTVA 62 (271)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 256
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=29.44 E-value=9.1 Score=35.49 Aligned_cols=11 Identities=45% Similarity=0.561 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 33 GpnGsGKSTLL 43 (348)
T 3d31_A 33 GPTGAGKTLFL 43 (348)
T ss_dssp CCCTHHHHHHH
T ss_pred CCCCccHHHHH
Confidence 89999999988
No 257
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=29.34 E-value=10 Score=34.37 Aligned_cols=12 Identities=42% Similarity=0.584 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|++|||||..|
T Consensus 29 ~G~NGsGKS~ll 40 (339)
T 3qkt_A 29 IGQNGSGKSSLL 40 (339)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 599999999887
No 258
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=29.30 E-value=11 Score=38.16 Aligned_cols=12 Identities=42% Similarity=0.387 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 527 ~Gp~GtGKT~lA 538 (758)
T 3pxi_A 527 LGPTGVGKTELA 538 (758)
T ss_dssp ESCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999886
No 259
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=29.14 E-value=9 Score=31.95 Aligned_cols=12 Identities=33% Similarity=0.263 Sum_probs=10.6
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|.+|+|||..+
T Consensus 29 ~G~~GsGKTtl~ 40 (247)
T 2dr3_A 29 SGGPGTGKTIFS 40 (247)
T ss_dssp EECTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 589999999985
No 260
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=29.06 E-value=12 Score=35.44 Aligned_cols=11 Identities=27% Similarity=0.274 Sum_probs=10.0
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+++
T Consensus 52 G~aGTGKT~ll 62 (459)
T 3upu_A 52 GPAGTGATTLT 62 (459)
T ss_dssp CCTTSCHHHHH
T ss_pred eCCCCCHHHHH
Confidence 88999999887
No 261
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=29.03 E-value=14 Score=37.37 Aligned_cols=20 Identities=5% Similarity=-0.169 Sum_probs=13.5
Q ss_pred cEEEEcCCHHHHHHHHHHHH
Q psy15014 208 ATSKSIRSAQEAMNALRQGA 227 (286)
Q Consensus 208 l~~~~V~S~eea~~lL~~G~ 227 (286)
-..+.|++.+++..+.+.-.
T Consensus 398 ~vLVFv~Tr~~ae~la~~L~ 417 (666)
T 3o8b_A 398 RHLIFCHSKKKCDELAAKLS 417 (666)
T ss_dssp EEEEECSCHHHHHHHHHHHH
T ss_pred cEEEEeCCHHHHHHHHHHHH
Confidence 35678888888777665443
No 262
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=29.01 E-value=12 Score=34.05 Aligned_cols=12 Identities=33% Similarity=0.498 Sum_probs=10.7
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|++|+|||.|+.
T Consensus 112 G~~G~GKTT~~~ 123 (320)
T 1zu4_A 112 GVNGTGKTTSLA 123 (320)
T ss_dssp SSTTSSHHHHHH
T ss_pred CCCCCCHHHHHH
Confidence 889999999983
No 263
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=29.00 E-value=12 Score=37.34 Aligned_cols=12 Identities=42% Similarity=0.470 Sum_probs=10.6
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|.||||||+.|
T Consensus 220 aG~TGSGKS~~L 231 (574)
T 2iut_A 220 AGTTGSGKSVGV 231 (574)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999886
No 264
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=28.95 E-value=11 Score=35.63 Aligned_cols=11 Identities=45% Similarity=0.585 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||.+|
T Consensus 54 GpsGsGKSTLL 64 (390)
T 3gd7_A 54 GRTGSGKSTLL 64 (390)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCChHHHHH
Confidence 89999999987
No 265
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=28.87 E-value=12 Score=33.54 Aligned_cols=11 Identities=45% Similarity=0.658 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+.+
T Consensus 38 G~sGsGKSTla 48 (290)
T 1odf_A 38 GPQGSGKSFTS 48 (290)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 266
>1w36_B RECB, exodeoxyribonuclease V beta chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 c.52.1.24 PDB: 3k70_B*
Probab=28.82 E-value=11 Score=40.41 Aligned_cols=39 Identities=10% Similarity=0.280 Sum_probs=22.3
Q ss_pred Hhhh-cccCCCccccccccCCCCCccccccCCCCceEEEcCCCcEE
Q psy15014 160 VLAS-LNKNNTFRFQIIDLFDDTRDYGLSKMKSNIKIHEDSGHSIY 204 (286)
Q Consensus 160 ~~~~-~~~~~~~~~~~~dLl~~~~~~~~~~~~~~l~i~e~~~~~v~ 204 (286)
|+|+ +|.-|..++.+...|.... ...++.+.-|++..||
T Consensus 381 ilVDEfQDtn~~Q~~il~~L~~~~------~~~~l~~VGD~kQSIY 420 (1180)
T 1w36_B 381 AMIDEFQDTDPQQYRIFRRIWHHQ------PETALLLIGDPKQAIY 420 (1180)
T ss_dssp EEECSGGGCCHHHHHHHHHHHTTC------TTCEEEEEECGGGCCC
T ss_pred EEEECCccCCHHHHHHHHHHHcCC------CCCeEEEEECCccccc
Confidence 3455 6666666666666554311 0345777777766554
No 267
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=28.75 E-value=13 Score=33.83 Aligned_cols=11 Identities=45% Similarity=0.347 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||...
T Consensus 43 apTGsGKT~~~ 53 (414)
T 3oiy_A 43 APTGVGKTTFG 53 (414)
T ss_dssp SCSSSSHHHHH
T ss_pred eCCCCCHHHHH
Confidence 68999999844
No 268
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=28.27 E-value=13 Score=29.21 Aligned_cols=11 Identities=27% Similarity=0.129 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 9 G~~GsGKsT~a 19 (173)
T 1e6c_A 9 GARGCGMTTVG 19 (173)
T ss_dssp SCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999864
No 269
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=28.21 E-value=12 Score=35.73 Aligned_cols=11 Identities=55% Similarity=0.459 Sum_probs=10.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|+|||+|+
T Consensus 104 G~~GsGKTTt~ 114 (433)
T 3kl4_A 104 GVQGSGKTTTA 114 (433)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999997
No 270
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A*
Probab=28.16 E-value=11 Score=36.74 Aligned_cols=12 Identities=42% Similarity=0.479 Sum_probs=10.4
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|..|||||+||.
T Consensus 29 a~aGsGKT~~l~ 40 (647)
T 3lfu_A 29 AGAGSGKTRVLV 40 (647)
T ss_dssp ECTTSCHHHHHH
T ss_pred ECCCCCHHHHHH
Confidence 678999999984
No 271
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=28.03 E-value=13 Score=31.71 Aligned_cols=11 Identities=18% Similarity=0.277 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|+|||..+
T Consensus 26 GPSGaGKsTL~ 36 (197)
T 3ney_A 26 GASGVGRSHIK 36 (197)
T ss_dssp CCTTSSHHHHH
T ss_pred CcCCCCHHHHH
Confidence 89999999876
No 272
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=27.89 E-value=13 Score=29.55 Aligned_cols=11 Identities=27% Similarity=0.253 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 10 G~~GsGKsT~a 20 (196)
T 1tev_A 10 GGPGAGKGTQC 20 (196)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999764
No 273
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=27.76 E-value=12 Score=33.76 Aligned_cols=12 Identities=50% Similarity=0.509 Sum_probs=10.3
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
.+||+|||.++.
T Consensus 30 ~~tG~GKT~~~~ 41 (494)
T 1wp9_A 30 LPTGLGKTLIAM 41 (494)
T ss_dssp CCTTSCHHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 589999999874
No 274
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=27.65 E-value=14 Score=29.82 Aligned_cols=11 Identities=27% Similarity=0.326 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 7 G~~GsGKsT~~ 17 (205)
T 2jaq_A 7 GTVGAGKSTIS 17 (205)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCccCHHHHH
Confidence 88999999865
No 275
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=27.41 E-value=9.2 Score=35.45 Aligned_cols=11 Identities=45% Similarity=0.519 Sum_probs=10.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 38 GpnGsGKSTLL 48 (353)
T 1oxx_K 38 GPSGAGKTTFM 48 (353)
T ss_dssp CSCHHHHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999988
No 276
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=27.35 E-value=12 Score=37.68 Aligned_cols=12 Identities=42% Similarity=0.329 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 494 ~G~~GtGKT~la 505 (758)
T 1r6b_X 494 AGPTGVGKTEVT 505 (758)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 699999999876
No 277
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=27.35 E-value=12 Score=36.44 Aligned_cols=12 Identities=17% Similarity=0.196 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+..
T Consensus 47 ~GpPGtGKT~LA 58 (500)
T 3nbx_X 47 LGPPGIAKSLIA 58 (500)
T ss_dssp ECCSSSSHHHHH
T ss_pred ecCchHHHHHHH
Confidence 799999999875
No 278
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=27.22 E-value=13 Score=36.61 Aligned_cols=12 Identities=33% Similarity=0.362 Sum_probs=10.7
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|..|||||+|+.
T Consensus 211 G~pGTGKTt~i~ 222 (574)
T 3e1s_A 211 GGPGTGKSTTTK 222 (574)
T ss_dssp CCTTSCHHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 889999999984
No 279
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=27.00 E-value=13 Score=35.45 Aligned_cols=13 Identities=31% Similarity=0.348 Sum_probs=11.6
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
||.+|+|||+...
T Consensus 207 ~G~pG~GKT~la~ 219 (468)
T 3pxg_A 207 IGEPGVGKTAIAE 219 (468)
T ss_dssp ESCTTTTTHHHHH
T ss_pred ECCCCCCHHHHHH
Confidence 7999999999874
No 280
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=26.95 E-value=14 Score=30.14 Aligned_cols=11 Identities=36% Similarity=0.314 Sum_probs=9.8
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 25 G~~GsGKSTla 35 (202)
T 3t61_A 25 GVSGSGKSSVG 35 (202)
T ss_dssp CSTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999865
No 281
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=26.90 E-value=12 Score=34.77 Aligned_cols=12 Identities=33% Similarity=0.493 Sum_probs=11.0
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|++|+|||..+
T Consensus 32 ~G~nG~GKttll 43 (359)
T 2o5v_A 32 YGENGAGKTNLL 43 (359)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCChhHHH
Confidence 599999999888
No 282
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=26.88 E-value=14 Score=34.14 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=10.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|++|||||.-+
T Consensus 29 ~G~NGaGKTTll 40 (365)
T 3qf7_A 29 EGPNGAGKSSLF 40 (365)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 499999999655
No 283
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=26.85 E-value=14 Score=31.97 Aligned_cols=28 Identities=21% Similarity=0.043 Sum_probs=19.0
Q ss_pred CCCcccccccc--c----cccCCCCCCCCcChHHHHHHH
Q psy15014 2 LQTGSGKTYTM--G----TGFETDVSEEMLGIIPRAITH 34 (286)
Q Consensus 2 GqTGSGKTyTm--~----G~~~~~~~~~~~GIiPRal~~ 34 (286)
|++|||||..+ + |- ...+.|-+.|++..
T Consensus 34 G~~GsGKSTl~k~La~~Lg~-----~~~d~g~i~r~~~~ 67 (252)
T 4e22_A 34 GPSGAGKGTLCKALAESLNW-----RLLDSGAIYRVLAL 67 (252)
T ss_dssp CCTTSSHHHHHHHHHHHTTC-----EEEEHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhcCC-----CcCCCCceehHhHH
Confidence 89999999876 1 31 23456777777653
No 284
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=26.78 E-value=13 Score=29.83 Aligned_cols=11 Identities=27% Similarity=0.202 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 12 G~~GsGKST~~ 22 (193)
T 2rhm_A 12 GHPATGKTTLS 22 (193)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999865
No 285
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=26.76 E-value=13 Score=33.35 Aligned_cols=11 Identities=36% Similarity=0.344 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||..|
T Consensus 11 G~~GaGKTTll 21 (318)
T 1nij_A 11 GFLGAGKTTLL 21 (318)
T ss_dssp ESSSSSCHHHH
T ss_pred ecCCCCHHHHH
Confidence 88999999987
No 286
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=26.74 E-value=11 Score=34.22 Aligned_cols=11 Identities=27% Similarity=0.492 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 87 G~sGsGKSTLl 97 (306)
T 3nh6_A 87 GPSGAGKSTIL 97 (306)
T ss_dssp SSSCHHHHHHH
T ss_pred CCCCchHHHHH
Confidence 89999999887
No 287
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=26.65 E-value=12 Score=30.73 Aligned_cols=11 Identities=45% Similarity=0.232 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+..
T Consensus 28 G~~GsGKSTl~ 38 (207)
T 2qt1_A 28 GVTNSGKTTLA 38 (207)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 78999999765
No 288
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=26.39 E-value=13 Score=30.06 Aligned_cols=11 Identities=36% Similarity=0.401 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||+..
T Consensus 15 G~~GsGKST~~ 25 (203)
T 1uf9_A 15 GNIGSGKSTVA 25 (203)
T ss_dssp ECTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999765
No 289
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=26.39 E-value=15 Score=29.37 Aligned_cols=11 Identities=27% Similarity=0.283 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 11 G~~GsGKST~~ 21 (186)
T 3cm0_A 11 GPPGAGKGTQA 21 (186)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999865
No 290
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=26.24 E-value=14 Score=31.20 Aligned_cols=11 Identities=45% Similarity=0.480 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||..+
T Consensus 27 G~~GsGKSTl~ 37 (230)
T 2vp4_A 27 GNIGSGKTTYL 37 (230)
T ss_dssp CSTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 291
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=26.05 E-value=16 Score=32.37 Aligned_cols=11 Identities=55% Similarity=0.443 Sum_probs=9.8
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||+..
T Consensus 40 G~sGsGKSTla 50 (287)
T 1gvn_B 40 GQPGSGKTSLR 50 (287)
T ss_dssp CCTTSCTHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999865
No 292
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=25.75 E-value=13 Score=33.36 Aligned_cols=11 Identities=45% Similarity=0.543 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 71 G~NGsGKSTLl 81 (290)
T 2bbs_A 71 GSTGAGKTSLL 81 (290)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999987
No 293
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=25.67 E-value=16 Score=33.89 Aligned_cols=11 Identities=36% Similarity=0.389 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||..-
T Consensus 47 GPTgsGKTtLa 57 (339)
T 3a8t_A 47 GATGTGKSRLS 57 (339)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999754
No 294
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=25.58 E-value=16 Score=28.66 Aligned_cols=11 Identities=27% Similarity=-0.043 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 7 G~~GsGKsT~a 17 (168)
T 2pt5_A 7 GFMCSGKSTVG 17 (168)
T ss_dssp SCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999764
No 295
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=25.48 E-value=19 Score=35.77 Aligned_cols=11 Identities=45% Similarity=0.773 Sum_probs=9.8
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||...
T Consensus 193 a~TGSGKT~~~ 203 (618)
T 2whx_A 193 LHPGAGKTKRI 203 (618)
T ss_dssp CCTTSSTTTTH
T ss_pred cCCCCCHHHHH
Confidence 68999999984
No 296
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=25.33 E-value=16 Score=29.12 Aligned_cols=11 Identities=36% Similarity=0.262 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+.-
T Consensus 11 G~~GsGKsTla 21 (175)
T 1via_A 11 GFMGSGKSTLA 21 (175)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCCCHHHHH
Confidence 89999999764
No 297
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=25.30 E-value=15 Score=37.69 Aligned_cols=12 Identities=42% Similarity=0.387 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 594 ~Gp~GtGKT~lA 605 (854)
T 1qvr_A 594 LGPTGVGKTELA 605 (854)
T ss_dssp BSCSSSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999876
No 298
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=25.13 E-value=16 Score=29.56 Aligned_cols=11 Identities=36% Similarity=0.392 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 17 G~~GsGKSTv~ 27 (184)
T 1y63_A 17 GTPGTGKTSMA 27 (184)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999864
No 299
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=24.98 E-value=12 Score=32.56 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=10.6
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|++|||||..+
T Consensus 36 ~G~~GsGKTtl~ 47 (279)
T 1nlf_A 36 VSPGGAGKSMLA 47 (279)
T ss_dssp EESTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 589999999876
No 300
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=24.97 E-value=15 Score=37.48 Aligned_cols=11 Identities=55% Similarity=0.652 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||..+
T Consensus 116 gpTGSGKTtll 126 (773)
T 2xau_A 116 GETGSGKTTQI 126 (773)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999943
No 301
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=24.92 E-value=17 Score=28.83 Aligned_cols=11 Identities=45% Similarity=0.326 Sum_probs=5.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 12 G~~GsGKST~a 22 (183)
T 2vli_A 12 GPFGVGKTHTA 22 (183)
T ss_dssp CCC----CHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999765
No 302
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=24.85 E-value=17 Score=31.33 Aligned_cols=11 Identities=45% Similarity=0.486 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+.|||||+..
T Consensus 39 G~~GsGKSTla 49 (253)
T 2p5t_B 39 GQSGAGKTTIH 49 (253)
T ss_dssp SCGGGTTHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999764
No 303
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=24.81 E-value=17 Score=37.43 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=24.3
Q ss_pred CCCCccccccccc---cccCC--------CCCCCCcChHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG---TGFET--------DVSEEMLGIIPRAITHLFEGIQN 41 (286)
Q Consensus 1 YGqTGSGKTyTm~---G~~~~--------~~~~~~~GIiPRal~~LF~~~~~ 41 (286)
||++|+|||+.+- +-... .......|-..+.+..+|.....
T Consensus 244 ~Gp~GtGKTtLarala~~l~~~~i~v~~~~l~~~~~g~~~~~l~~vf~~a~~ 295 (806)
T 1ypw_A 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK 295 (806)
T ss_dssp CSCTTSSHHHHHHHHHHTTTCEEEEEEHHHHSSSSTTHHHHHHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHHHcCCcEEEEEchHhhhhhhhhHHHHHHHHHHHHHh
Confidence 7999999998762 11000 01123346666777777777654
No 304
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=24.60 E-value=15 Score=30.02 Aligned_cols=11 Identities=27% Similarity=0.338 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 8 G~~GsGKSTl~ 18 (204)
T 2if2_A 8 GNIGCGKSTVA 18 (204)
T ss_dssp ECTTSSHHHHH
T ss_pred CCCCcCHHHHH
Confidence 88999999865
No 305
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=24.59 E-value=15 Score=29.62 Aligned_cols=11 Identities=36% Similarity=0.286 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 19 G~~GsGKsT~a 29 (199)
T 2bwj_A 19 GGPGSGKGTQC 29 (199)
T ss_dssp ECTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999765
No 306
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=24.53 E-value=16 Score=34.22 Aligned_cols=11 Identities=27% Similarity=0.462 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|||||..|
T Consensus 61 GpnGaGKSTLl 71 (366)
T 3tui_C 61 GASGAGKSTLI 71 (366)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCchHHHHH
Confidence 89999999876
No 307
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=24.38 E-value=17 Score=29.04 Aligned_cols=11 Identities=36% Similarity=0.250 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+.-
T Consensus 9 G~~GsGKsT~a 19 (184)
T 2iyv_A 9 GLPGSGKSTIG 19 (184)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999863
No 308
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=24.29 E-value=15 Score=29.22 Aligned_cols=11 Identities=27% Similarity=0.353 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 8 G~~GsGKsT~~ 18 (194)
T 1nks_A 8 GIPGVGKSTVL 18 (194)
T ss_dssp ECTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999755
No 309
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=24.20 E-value=13 Score=32.60 Aligned_cols=12 Identities=17% Similarity=0.235 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||..+
T Consensus 36 ~G~~G~GKT~L~ 47 (357)
T 2fna_A 36 LGLRRTGKSSII 47 (357)
T ss_dssp EESTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 699999999887
No 310
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=24.18 E-value=17 Score=34.77 Aligned_cols=10 Identities=50% Similarity=0.963 Sum_probs=9.0
Q ss_pred CCCccccccc
Q psy15014 2 LQTGSGKTYT 11 (286)
Q Consensus 2 GqTGSGKTyT 11 (286)
++||||||.+
T Consensus 118 apTGsGKTl~ 127 (563)
T 3i5x_A 118 AKTGTGKTFA 127 (563)
T ss_dssp CCTTSCHHHH
T ss_pred CCCCCCccHH
Confidence 5899999986
No 311
>2va8_A SSO2462, SKI2-type helicase; hydrolase, DNA repair, ATP-bindin nucleotide-binding; 2.30A {Sulfolobus solfataricus}
Probab=24.09 E-value=16 Score=36.26 Aligned_cols=11 Identities=55% Similarity=0.607 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||...
T Consensus 53 apTGsGKT~~~ 63 (715)
T 2va8_A 53 SPTGSGKTLIA 63 (715)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCCcHHHHH
Confidence 78999999886
No 312
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=23.72 E-value=16 Score=29.08 Aligned_cols=11 Identities=36% Similarity=0.286 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 13 G~~GsGKsT~~ 23 (194)
T 1qf9_A 13 GGPGSGKGTQC 23 (194)
T ss_dssp ESTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999864
No 313
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=23.72 E-value=17 Score=29.07 Aligned_cols=11 Identities=36% Similarity=0.371 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||...
T Consensus 12 G~~GsGKST~~ 22 (179)
T 2pez_A 12 GLSGAGKTTVS 22 (179)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999865
No 314
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=23.49 E-value=18 Score=29.91 Aligned_cols=11 Identities=36% Similarity=0.350 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 11 G~~GSGKST~~ 21 (218)
T 1vht_A 11 GGIGSGKSTVA 21 (218)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999864
No 315
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=23.47 E-value=18 Score=32.93 Aligned_cols=12 Identities=17% Similarity=0.246 Sum_probs=10.5
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|++|||||..+
T Consensus 132 vGpsGsGKSTLl 143 (305)
T 2v9p_A 132 IGPPNTGKSMLC 143 (305)
T ss_dssp ECSSSSSHHHHH
T ss_pred ECCCCCcHHHHH
Confidence 499999999877
No 316
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=23.44 E-value=18 Score=28.76 Aligned_cols=11 Identities=45% Similarity=0.371 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+-.
T Consensus 7 G~~GsGKsT~~ 17 (195)
T 2pbr_A 7 GIDGSGKTTQA 17 (195)
T ss_dssp CSTTSCHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999754
No 317
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=23.43 E-value=20 Score=34.04 Aligned_cols=12 Identities=50% Similarity=0.423 Sum_probs=10.7
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|.+|+|||++..
T Consensus 106 G~~GvGKTTla~ 117 (432)
T 2v3c_C 106 GIQGSGKTTTAA 117 (432)
T ss_dssp CCSSSSTTHHHH
T ss_pred CCCCCCHHHHHH
Confidence 889999999983
No 318
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=23.37 E-value=18 Score=29.06 Aligned_cols=11 Identities=45% Similarity=0.365 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 20 G~~GsGKsT~~ 30 (186)
T 2yvu_A 20 GLPGSGKTTIA 30 (186)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCCCHHHHH
Confidence 88999999865
No 319
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=23.26 E-value=16 Score=29.28 Aligned_cols=11 Identities=36% Similarity=0.286 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 16 G~~GsGKsT~~ 26 (196)
T 2c95_A 16 GGPGSGKGTQC 26 (196)
T ss_dssp ECTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999865
No 320
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=23.20 E-value=19 Score=33.25 Aligned_cols=11 Identities=45% Similarity=0.265 Sum_probs=9.5
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||...
T Consensus 10 GptgsGKt~la 20 (322)
T 3exa_A 10 GPTAVGKTKTS 20 (322)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCcCCHHHHH
Confidence 89999999754
No 321
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=23.07 E-value=17 Score=32.66 Aligned_cols=12 Identities=25% Similarity=0.213 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||+..
T Consensus 110 ~GppgtGKt~~a 121 (267)
T 1u0j_A 110 FGPATTGKTNIA 121 (267)
T ss_dssp ECSTTSSHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 799999999876
No 322
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=22.89 E-value=18 Score=34.78 Aligned_cols=12 Identities=50% Similarity=0.487 Sum_probs=10.8
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|.+|+|||+|+.
T Consensus 107 G~~G~GKTTt~~ 118 (443)
T 3dm5_A 107 GIQGSGKTTTVA 118 (443)
T ss_dssp CCTTSSHHHHHH
T ss_pred CcCCCCHHHHHH
Confidence 889999999984
No 323
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=22.72 E-value=19 Score=29.23 Aligned_cols=11 Identities=27% Similarity=0.253 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 22 G~~GsGKsT~~ 32 (203)
T 1ukz_A 22 GGPGAGKGTQC 32 (203)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999764
No 324
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=22.69 E-value=20 Score=33.03 Aligned_cols=11 Identities=45% Similarity=0.265 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||.-.
T Consensus 17 GptgsGKt~la 27 (316)
T 3foz_A 17 GPTASGKTALA 27 (316)
T ss_dssp CCTTSCHHHHH
T ss_pred CCCccCHHHHH
Confidence 99999999654
No 325
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=22.55 E-value=19 Score=33.68 Aligned_cols=11 Identities=45% Similarity=0.721 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 26 ~~tGsGKT~~~ 36 (555)
T 3tbk_A 26 APTGCGKTFVS 36 (555)
T ss_dssp CCTTSCHHHHH
T ss_pred eCCCChHHHHH
Confidence 58999999874
No 326
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=22.53 E-value=19 Score=33.06 Aligned_cols=12 Identities=42% Similarity=0.315 Sum_probs=9.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|+||||||..-
T Consensus 11 ~GptGsGKTtla 22 (323)
T 3crm_A 11 MGPTAAGKTDLA 22 (323)
T ss_dssp ECCTTSCHHHHH
T ss_pred ECCCCCCHHHHH
Confidence 399999999753
No 327
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=22.35 E-value=17 Score=33.98 Aligned_cols=17 Identities=12% Similarity=0.212 Sum_probs=14.6
Q ss_pred hhhcccCCCcccccccc
Q psy15014 161 LASLNKNNTFRFQIIDL 177 (286)
Q Consensus 161 ~~~~~~~~~~~~~~~dL 177 (286)
.+..++-|+|||+++||
T Consensus 155 ~v~vS~~EIYnE~i~DL 171 (359)
T 3nwn_A 155 TVRVSYLEIYNESLFDL 171 (359)
T ss_dssp EEEEEEEEEETTEEEET
T ss_pred EEEEEEEEEeccccccc
Confidence 46677889999999998
No 328
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=22.25 E-value=17 Score=36.56 Aligned_cols=12 Identities=33% Similarity=0.412 Sum_probs=11.1
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||.+|+|||+.+
T Consensus 213 ~G~~GtGKT~la 224 (758)
T 1r6b_X 213 VGESGVGKTAIA 224 (758)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 699999999987
No 329
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=22.17 E-value=21 Score=33.09 Aligned_cols=11 Identities=45% Similarity=0.229 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.||||||..-
T Consensus 14 GptgSGKTtla 24 (340)
T 3d3q_A 14 GPTASGKTELS 24 (340)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCcCcHHHHH
Confidence 89999999753
No 330
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=22.01 E-value=18 Score=36.11 Aligned_cols=11 Identities=45% Similarity=0.570 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|+||||||...
T Consensus 46 apTGsGKT~~~ 56 (720)
T 2zj8_A 46 IPTASGKTLIA 56 (720)
T ss_dssp CCGGGCHHHHH
T ss_pred cCCccHHHHHH
Confidence 78999999765
No 331
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=21.67 E-value=20 Score=32.04 Aligned_cols=11 Identities=27% Similarity=0.428 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|+|||..|
T Consensus 172 G~sG~GKSTLl 182 (302)
T 2yv5_A 172 GPSGVGKSSIL 182 (302)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 332
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=21.62 E-value=18 Score=36.31 Aligned_cols=13 Identities=54% Similarity=0.700 Sum_probs=11.4
Q ss_pred CCCCccccccccc
Q psy15014 1 MLQTGSGKTYTMG 13 (286)
Q Consensus 1 YGqTGSGKTyTm~ 13 (286)
.|.||||||+||.
T Consensus 34 ~g~tgs~kt~~~a 46 (664)
T 1c4o_A 34 LGATGTGKTVTMA 46 (664)
T ss_dssp EECTTSCHHHHHH
T ss_pred EcCCCcHHHHHHH
Confidence 3789999999995
No 333
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=21.55 E-value=17 Score=29.37 Aligned_cols=11 Identities=18% Similarity=0.392 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|+|||..+
T Consensus 33 G~~g~GKSTLl 43 (210)
T 1pui_A 33 GRSNAGKSSAL 43 (210)
T ss_dssp ECTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999776
No 334
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=21.52 E-value=21 Score=28.84 Aligned_cols=11 Identities=27% Similarity=0.253 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||...
T Consensus 9 G~~GsGKst~~ 19 (208)
T 3ake_A 9 GPSASGKSSVA 19 (208)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999765
No 335
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=21.34 E-value=21 Score=29.26 Aligned_cols=11 Identities=27% Similarity=0.241 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 7 G~~GsGKsT~a 17 (216)
T 3fb4_A 7 GLPGAGKGTQA 17 (216)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999765
No 336
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=21.31 E-value=20 Score=36.88 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=25.7
Q ss_pred CCCCccccccccc------cccC-----CCCCCCCcChHHHHHHHHHHHHHHH
Q psy15014 1 MLQTGSGKTYTMG------TGFE-----TDVSEEMLGIIPRAITHLFEGIQNI 42 (286)
Q Consensus 1 YGqTGSGKTyTm~------G~~~-----~~~~~~~~GIiPRal~~LF~~~~~~ 42 (286)
||++|+|||+..- +..- ......-.|-.++.+..+|+.....
T Consensus 517 ~GppGtGKT~Lakala~~~~~~~i~v~~~~l~~~~~g~~~~~i~~~f~~a~~~ 569 (806)
T 1ypw_A 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 569 (806)
T ss_dssp BCCTTSSHHHHHHHHHHHHTCCCCCCCCSSSTTCCTTTSSHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhCCCEEEEechHhhhhhcCccHHHHHHHHHHHHhc
Confidence 7999999999871 1100 0111223455567788899887654
No 337
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=21.26 E-value=22 Score=28.02 Aligned_cols=11 Identities=36% Similarity=0.262 Sum_probs=9.3
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||..-
T Consensus 14 G~~GsGKSTva 24 (168)
T 1zuh_A 14 GFMGSGKSSLA 24 (168)
T ss_dssp SCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999754
No 338
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=21.21 E-value=21 Score=31.83 Aligned_cols=11 Identities=27% Similarity=0.365 Sum_probs=10.1
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|+|||..+
T Consensus 176 G~sG~GKSTll 186 (301)
T 1u0l_A 176 GLSGVGKSSLL 186 (301)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCcHHHHH
Confidence 89999999877
No 339
>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19
Probab=21.12 E-value=20 Score=35.42 Aligned_cols=12 Identities=42% Similarity=0.531 Sum_probs=10.2
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|..|||||+||.
T Consensus 22 AgaGSGKT~~l~ 33 (673)
T 1uaa_A 22 AGAGSGKTRVIT 33 (673)
T ss_dssp CCTTSCHHHHHH
T ss_pred eCCCCChHHHHH
Confidence 667999999995
No 340
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=21.03 E-value=16 Score=31.30 Aligned_cols=11 Identities=27% Similarity=0.120 Sum_probs=9.1
Q ss_pred CCCCccccccc
Q psy15014 1 MLQTGSGKTYT 11 (286)
Q Consensus 1 YGqTGSGKTyT 11 (286)
||..|||||.-
T Consensus 26 yG~MgsGKTt~ 36 (195)
T 1w4r_A 26 LGPMFSGKSTE 36 (195)
T ss_dssp EECTTSCHHHH
T ss_pred ECCCCCcHHHH
Confidence 79999999933
No 341
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=20.83 E-value=22 Score=28.70 Aligned_cols=11 Identities=36% Similarity=0.341 Sum_probs=9.7
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 11 G~~GsGKsT~~ 21 (213)
T 2plr_A 11 GIDGSGKSSQA 21 (213)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCCCHHHHH
Confidence 88999999875
No 342
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=20.79 E-value=10 Score=34.84 Aligned_cols=12 Identities=33% Similarity=0.515 Sum_probs=10.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
.|.+|||||..|
T Consensus 66 vG~NGaGKStLl 77 (415)
T 4aby_A 66 TGETGAGKSIIV 77 (415)
T ss_dssp EESHHHHHHHHT
T ss_pred ECCCCCCHHHHH
Confidence 489999999988
No 343
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=20.74 E-value=19 Score=30.03 Aligned_cols=11 Identities=36% Similarity=0.296 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 14 G~~GsGKsT~a 24 (227)
T 1zd8_A 14 GAPGSGKGTVS 24 (227)
T ss_dssp ECTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999865
No 344
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=20.74 E-value=22 Score=33.41 Aligned_cols=11 Identities=55% Similarity=0.785 Sum_probs=9.4
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
++||||||.+.
T Consensus 29 ~~tGsGKT~~~ 39 (556)
T 4a2p_A 29 APTGSGKTFVS 39 (556)
T ss_dssp CCTTSCHHHHH
T ss_pred cCCCChHHHHH
Confidence 58999999874
No 345
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=20.67 E-value=22 Score=30.66 Aligned_cols=11 Identities=27% Similarity=0.169 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||+..
T Consensus 11 G~pGSGKSTla 21 (260)
T 3a4m_A 11 GLPGVGKSTFS 21 (260)
T ss_dssp CCTTSSHHHHH
T ss_pred cCCCCCHHHHH
Confidence 89999999864
No 346
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=20.64 E-value=22 Score=28.75 Aligned_cols=11 Identities=27% Similarity=0.456 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|+|||..+
T Consensus 12 G~~g~GKSTLl 22 (199)
T 2f9l_A 12 GDSGVGKSNLL 22 (199)
T ss_dssp SSTTSSHHHHH
T ss_pred CcCCCCHHHHH
Confidence 89999999776
No 347
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=20.50 E-value=22 Score=27.05 Aligned_cols=11 Identities=18% Similarity=0.193 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|+|||..+
T Consensus 8 G~~~~GKSsli 18 (161)
T 2dyk_A 8 GRPNVGKSSLF 18 (161)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999776
No 348
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=20.49 E-value=26 Score=31.42 Aligned_cols=12 Identities=50% Similarity=0.584 Sum_probs=10.6
Q ss_pred CCCccccccccc
Q psy15014 2 LQTGSGKTYTMG 13 (286)
Q Consensus 2 GqTGSGKTyTm~ 13 (286)
|.+|+|||.++.
T Consensus 105 G~~G~GKTT~~~ 116 (297)
T 1j8m_F 105 GVQGTGKTTTAG 116 (297)
T ss_dssp CSSCSSTTHHHH
T ss_pred CCCCCCHHHHHH
Confidence 789999999883
No 349
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=20.32 E-value=21 Score=29.60 Aligned_cols=12 Identities=42% Similarity=0.337 Sum_probs=9.9
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
+|.+|+|||.-+
T Consensus 36 ~G~pG~GKT~l~ 47 (251)
T 2zts_A 36 TGGTGTGKTTFA 47 (251)
T ss_dssp ECCTTSSHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 589999999654
No 350
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=20.28 E-value=19 Score=32.78 Aligned_cols=11 Identities=27% Similarity=0.232 Sum_probs=10.2
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|.+|||||..+
T Consensus 177 G~nGsGKSTLl 187 (365)
T 1lw7_A 177 GGESSGKSVLV 187 (365)
T ss_dssp CCTTSHHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999887
No 351
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=20.27 E-value=23 Score=28.30 Aligned_cols=11 Identities=36% Similarity=0.437 Sum_probs=9.6
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|..|||||...
T Consensus 7 G~~GsGKsT~~ 17 (197)
T 2z0h_A 7 GIDGSGKSTQI 17 (197)
T ss_dssp CSTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 88999999766
No 352
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=20.22 E-value=22 Score=29.77 Aligned_cols=11 Identities=27% Similarity=0.483 Sum_probs=9.9
Q ss_pred CCCcccccccc
Q psy15014 2 LQTGSGKTYTM 12 (286)
Q Consensus 2 GqTGSGKTyTm 12 (286)
|++|+|||.-+
T Consensus 8 GPSG~GK~Tl~ 18 (186)
T 1ex7_A 8 GPSGTGKSTLL 18 (186)
T ss_dssp CCTTSSHHHHH
T ss_pred CCCCCCHHHHH
Confidence 89999999876
No 353
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=20.17 E-value=21 Score=34.36 Aligned_cols=12 Identities=42% Similarity=0.399 Sum_probs=10.7
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||++|+|||+..
T Consensus 56 ~GppGtGKT~la 67 (444)
T 1g41_A 56 IGPTGVGKTEIA 67 (444)
T ss_dssp ECCTTSSHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 699999999875
No 354
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=20.02 E-value=20 Score=31.32 Aligned_cols=12 Identities=17% Similarity=0.146 Sum_probs=10.8
Q ss_pred CCCCcccccccc
Q psy15014 1 MLQTGSGKTYTM 12 (286)
Q Consensus 1 YGqTGSGKTyTm 12 (286)
||+.|+|||..+
T Consensus 37 ~G~~G~GKT~Ll 48 (350)
T 2qen_A 37 LGIRRVGKSSLL 48 (350)
T ss_dssp ECCTTSSHHHHH
T ss_pred ECCCcCCHHHHH
Confidence 699999999877
Done!