RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1502
(597 letters)
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 207 bits (528), Expect = 2e-63
Identities = 73/217 (33%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Query: 339 GKIEFQNTNVRYLSG-PRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGV 396
G+I+ + + +Y ++K++N++I E + VG +G GKS+LI I R +V G
Sbjct: 15 GRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 74
Query: 397 IKIDDIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNL-DPFEKYPDYVLWTALQEVELK 455
I ID + +D LR+ I ++ QD +LFS T+++N+ D + A +
Sbjct: 75 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAH 134
Query: 456 DMIME-GAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQ 514
D IM G + V E G S GQ+Q + +AR + N IL+LDEAT+ +D +++ +IQ
Sbjct: 135 DFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQ 194
Query: 515 RTIRKKFADCTVLTIAHRLHTIMDSDKVLVMDSGVAV 551
+ D T L +AHRL TI +DK++V+++G V
Sbjct: 195 EALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIV 231
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 200 bits (509), Expect = 1e-60
Identities = 74/228 (32%), Positives = 129/228 (56%), Gaps = 5/228 (2%)
Query: 329 EDENEIWPVLGKIEFQNTNVRYLSGPR-VIKNLNITIHPKEKIGIVGRTGAGKSSLIAAI 387
E + I G +EF+N Y ++N+N+ I + + +VGR+G+GKS++ + I
Sbjct: 2 EGKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLI 61
Query: 388 FRLAEV-EGVIKIDDIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKN--LDPFEKYPDYV 444
R ++ EG I +D D + L+ LR+ ++++ Q+ LF+ T+ N E+Y
Sbjct: 62 TRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQ 121
Query: 445 LWTALQEVELKDMIME-GAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATA 503
+ A + D I + GL+ + E G S GQRQ I +ARA++R++ IL+LDEAT+
Sbjct: 122 IEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATS 181
Query: 504 NVDPKTDLLIQRTIRKKFADCTVLTIAHRLHTIMDSDKVLVMDSGVAV 551
+D +++ IQ + + + T L IAHRL TI +D+++V++ G+ V
Sbjct: 182 ALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIV 229
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 193 bits (493), Expect = 2e-58
Identities = 66/215 (30%), Positives = 111/215 (51%), Gaps = 4/215 (1%)
Query: 341 IEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGVIKI 399
+ ++ + Y +++++++ P I G +G GKS++ + + R + G I I
Sbjct: 2 LSARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITI 61
Query: 400 DDIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNLD--PFEKYPDYVLWTALQEVELKDM 457
D +++ L RS I + QD + +GT+R+NL Y D LW L +
Sbjct: 62 DGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSF 121
Query: 458 IMEGAGLNMT-VYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRT 516
+ T V E G S GQRQ + +ARA +RN IL+LDEATA++D +++ ++Q+
Sbjct: 122 VENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKA 181
Query: 517 IRKKFADCTVLTIAHRLHTIMDSDKVLVMDSGVAV 551
+ T L IAHRL TI+D+DK+ ++ G
Sbjct: 182 LDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQIT 216
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 189 bits (482), Expect = 7e-57
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 8/225 (3%)
Query: 335 WPVLGKIEFQNTNVRYLSGP--RVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAE 392
+ G ++FQ+ + Y + P V++ L T+ P E +VG G+GKS++ A + L +
Sbjct: 6 LHLEGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQ 65
Query: 393 VEGV-IKIDDIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNL--DPFEKYPDYVLWTAL 449
G + +D L ++ + Q+P +F +L++N+ +K + A
Sbjct: 66 PTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAA 125
Query: 450 QEVELKDMIME-GAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPK 508
+ I G + V E G+ S GQRQ + LARA++R +L+LD+AT+ +D
Sbjct: 126 VKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDAN 185
Query: 509 TDLLIQRTIRK--KFADCTVLTIAHRLHTIMDSDKVLVMDSGVAV 551
+ L +++ + + + +VL I L + +D +L ++ G
Sbjct: 186 SQLQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIR 230
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 188 bits (479), Expect = 1e-56
Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 341 IEFQNTNVRYLSG-PRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGV-IK 398
I F+N RY P ++ N+N++I E IGIVGR+G+GKS+L I R E +
Sbjct: 2 ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVL 61
Query: 399 IDDIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNLDPF-EKYPDYVLWTALQEVELKDM 457
ID D + LR + ++ QD VL + ++ N+ + A + D
Sbjct: 62 IDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDF 121
Query: 458 IME-GAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRT 516
I E G N V E G S GQRQ I +ARA+V N IL+ DEAT+ +D +++ +I R
Sbjct: 122 ISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRN 181
Query: 517 IRKKFADCTVLTIAHRLHTIMDSDKVLVMDSGVAV 551
+ K TV+ IAHRL T+ ++D+++VM+ G V
Sbjct: 182 MHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIV 216
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 177 bits (451), Expect = 6e-52
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 329 EDENEIWPVLGKIEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIF 388
+ + + F + L G V+KN+N+ I E + I G TG+GK+SL+ I
Sbjct: 27 NGDRKHSSDENNVSFSHL---CLVGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLIL 83
Query: 389 RLAEV-EGVIKIDDIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNLDPFEKYPDYVLWT 447
E EG+IK +S Q + GT+++N+ Y +Y +
Sbjct: 84 GELEASEGIIKHSG-------------RVSFCSQFSWIMPGTIKENIIFGVSYDEYRYKS 130
Query: 448 ALQEVELKDMIME-GAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVD 506
++ +L+ I + N + EGG S GQR I LARA+ ++ + +LD +D
Sbjct: 131 VVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLD 190
Query: 507 PKT-DLLIQRTIRKKFADCTVLTIAHRLHTIMDSDKVLVMDSGVAV 551
T + + + + K A+ T + + ++ + +DK+L++ G +
Sbjct: 191 VFTEEQVFESCVCKLMANKTRILVTSKMEHLRKADKILILHQGSSY 236
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 114 bits (287), Expect = 2e-29
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 12/223 (5%)
Query: 341 IEFQNTNVRYLSGP---RVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGV 396
I+ +N Y G +KN+N+ I E + I+G +G+GKS+++ I L + EG
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGE 61
Query: 397 IKIDDIDTEDVPLSKL----RSNISIIPQDPVLFSG-TLRKNLDPFEKYPDYVLWTALQE 451
+ ID+I T D+ +L R I + Q L T +N++ + + +
Sbjct: 62 VYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEER 121
Query: 452 VELKDMIMEGAGLNMTVYEG-GTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTD 510
+ ++ A L S GQ+Q + +ARA+ N I++ D+ T +D KT
Sbjct: 122 RKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTG 181
Query: 511 LLIQRTIRK--KFADCTVLTIAHRLHTIMDSDKVLVMDSGVAV 551
I + ++K + TV+ + H ++ ++++ + G
Sbjct: 182 EKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVE 224
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 111 bits (280), Expect = 1e-28
Identities = 36/218 (16%), Positives = 82/218 (37%), Gaps = 23/218 (10%)
Query: 341 IEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGVIKID 400
++ Q+ + L+ + E + +VG GAGKS+L+A + + +G I+
Sbjct: 4 MQLQDVAEST-----RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFA 58
Query: 401 DIDTEDVPLSKLRSNISIIPQDP-VLFSGTLRKNLDPFEKYPDYVLWTALQEVELKDMIM 459
E +KL + + + Q F+ + L + EL + +
Sbjct: 59 GQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQH--------DKTRTELLNDVA 110
Query: 460 EGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNV-------ILVLDEATANVDPKTDLL 512
L+ + S G+ Q + LA +++ +L+LDE ++D
Sbjct: 111 GALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSA 170
Query: 513 IQRTIRK-KFADCTVLTIAHRLHTIMD-SDKVLVMDSG 548
+ + + ++ +H L+ + + + ++ G
Sbjct: 171 LDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGG 208
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 107 bits (269), Expect = 6e-27
Identities = 49/230 (21%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 340 KIEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGVIK 398
K+ + + RY G V+K +++ + I I+G +G+GKS+ + I L + EG I
Sbjct: 2 KLHVIDLHKRY-GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAII 60
Query: 399 IDDIDTEDVP-------------LSKLRSNISIIPQDPVLFSGTLRKNLDPFEKYPDYVL 445
++ + V L LR+ ++++ Q L+S L+ + P VL
Sbjct: 61 VNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSH--MTVLENVMEAPIQVL 118
Query: 446 WTALQEVELK-DMIMEGAGLNMTVYEG-GTNFSVGQRQLICLARAIVRNNVILVLDEATA 503
+ + + + G++ + S GQ+Q + +ARA+ +L+ DE T+
Sbjct: 119 GLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTS 178
Query: 504 NVDPKTDLLIQRTIRKKF-ADCTVLTIAHRLHTIMD-SDKVLVMDSGVAV 551
+DP+ + R +++ T++ + H + S V+ + G
Sbjct: 179 ALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE 228
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 105 bits (264), Expect = 2e-26
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 340 KIEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGVIK 398
+++ +N R+ + LN+TI E + ++G +G GK++ + I L E EG I
Sbjct: 6 EVKLENLTKRF-GNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIY 64
Query: 399 IDDIDTEDVPLSKLRSNISIIPQDPVLFSG-TLRKNLDPFEKYP-------DYVLWTALQ 450
D D L NIS++ Q ++ T+ +N+ K D + A +
Sbjct: 65 FGDRD--VTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAE 122
Query: 451 EVELKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTD 510
+++++++ S GQRQ + +ARAIV +L++DE +N+D K
Sbjct: 123 LLQIEELLNRYPA----------QLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLR 172
Query: 511 LLIQRTIRK--KFADCTVLTIAHRLHTIMD-SDKVLVMDSGVAV 551
+ ++ I+K + T + + H M D++ VM+ G +
Sbjct: 173 VAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLL 216
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 105 bits (263), Expect = 3e-26
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 341 IEFQNTNVRYLSGP---RVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGV 396
I+ N + G + + N+++ + + G++G +GAGKS+LI + L EG
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 397 IKIDDIDTEDVP---LSKLRSNISIIPQDPVLF-SGTLRKNLDPFEKYPDYVLWTALQEV 452
+ +D + + L+K R I +I Q L S T+ N+ + + + V
Sbjct: 62 VLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRV 121
Query: 453 ELKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLL 512
++ GL +N S GQ+Q + +ARA+ N +L+ DEAT+ +DP T
Sbjct: 122 T---ELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRS 178
Query: 513 IQRTIRK--KFADCTVLTIAHRLHTIMD-SDKVLVMDSGVAV 551
I ++ + T+L I H + + D V V+ +G +
Sbjct: 179 ILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELI 220
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 102 bits (256), Expect = 1e-25
Identities = 41/212 (19%), Positives = 88/212 (41%), Gaps = 24/212 (11%)
Query: 340 KIEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGVIKI 399
K+E ++ +V Y V++ + +TI + G G GK++L+ I +
Sbjct: 2 KLEIRDLSVGY--DKPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLK---- 55
Query: 400 DDIDTEDVPLSKLRSNISIIPQDPVLFSG-TLRKNLDPF-----EKYPDYVLWTALQEVE 453
+I VP++K++ I +P++ ++ ++ L K + AL+ VE
Sbjct: 56 GEIIYNGVPITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVE 115
Query: 454 LKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLI 513
+ D+ + L S G + + LA ++ N I VLD+ +D + +
Sbjct: 116 VLDLKKKLGEL-----------SQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKV 164
Query: 514 QRTIRKKFADCTVLTIAHRLHTIMDSDKVLVM 545
++I + + ++ I+ R + D +
Sbjct: 165 LKSILEILKEKGIVIISSR-EELSYCDVNENL 195
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 100 bits (250), Expect = 2e-24
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 341 IEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGVIKI 399
+ +N + + + ++I+++ + I+G G+GKS+LI I + EG +
Sbjct: 5 LRTENIVKYF-GEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYF 63
Query: 400 DDIDTEDVPLSKL-RSNISIIPQDPVLFSG-TLRKNLDPFEKYPDYVLWTAL-------- 449
++ D + ++L I Q P T+ +NL E P +L
Sbjct: 64 ENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPK 123
Query: 450 --QEVELKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDP 507
+ VE I+E L+ S GQ +L+ + RA++ N ++V+DE A V P
Sbjct: 124 EEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAP 183
Query: 508 KTDLLIQRTIRK-KFADCTVLTIAHRLHTIMD-SDKVLVMDSG 548
I + + K T L I HRL +++ D + VM +G
Sbjct: 184 GLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNG 226
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 99.7 bits (248), Expect = 3e-24
Identities = 44/216 (20%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 339 GKIEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGVI 397
G + ++ R ++K ++ I E G++G GAGK++ + I L + G++
Sbjct: 1 GAVVVKDLRKRI-GKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIV 59
Query: 398 KIDDIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNLDPFEKYPDYVLWTALQEVELKDM 457
+ + + P ++R IS +P++ +N+ E + A E+++M
Sbjct: 60 TVFGKNVVEEP-HEVRKLISYLPEEA-----GAYRNMQGIEYLRFVAGFYASSSSEIEEM 113
Query: 458 I---MEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQ 514
+ E AGL + + + +S G + + +ARA++ N + +LDE T+ +D ++
Sbjct: 114 VERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVR 173
Query: 515 RTIRK-KFADCTVLTIAHRLHTIMD-SDKVLVMDSG 548
+ +++ T+L +H + + D++ ++ +G
Sbjct: 174 KILKQASQEGLTILVSSHNMLEVEFLCDRIALIHNG 209
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 96.2 bits (239), Expect = 4e-23
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 15/218 (6%)
Query: 341 IEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGV-IKI 399
++ QN + V K++N+ IH E + VG +G GKS+L+ I L + + I
Sbjct: 1 VQLQNVTKAW-GEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFI 59
Query: 400 DDIDTEDVPLSKLRSNISIIPQDPVLFSG-TLRKNLDPFEKYPDYVLWTALQEVE--LKD 456
+ D P + ++ Q L+ ++ +N+ K Q V +
Sbjct: 60 GEKRMNDTP--PAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV 117
Query: 457 MIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRT 516
+ + L+ S GQRQ + + R +V + +LDE +N+D + ++
Sbjct: 118 LQLAHL-LDRKPKA----LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIE 172
Query: 517 IRK--KFADCTVLTIAHRLHTIMD-SDKVLVMDSGVAV 551
I + K T++ + H M +DK++V+D+G
Sbjct: 173 ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVA 210
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 93.5 bits (232), Expect = 4e-22
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 13/221 (5%)
Query: 340 KIEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGV-IK 398
+ + + ++ +++ + E + ++G +G GK++ + I L E I
Sbjct: 3 GVRLVDVWKVF-GEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIY 61
Query: 399 IDDID----TEDVPLSKLRSNISIIPQDPVLFSG-TLRKNLDPFEKYPDYVLWTALQEVE 453
I D + + + +I+++ Q L+ T+ N+ K Q V
Sbjct: 62 IGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVR 121
Query: 454 LKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLI 513
+ E GL + S GQRQ + L RAIVR + ++DE +N+D K + +
Sbjct: 122 ---EVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRM 178
Query: 514 QRTIRK--KFADCTVLTIAHRLHTIMD-SDKVLVMDSGVAV 551
+ ++K + T + + H M D++ VM+ GV
Sbjct: 179 RAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQ 219
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 91.5 bits (227), Expect = 2e-21
Identities = 34/210 (16%), Positives = 83/210 (39%), Gaps = 3/210 (1%)
Query: 341 IEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGVIKID 400
+E Q+ +V Y IK +++ + + + ++G GAGK++ ++AI L + I
Sbjct: 7 LEVQSLHVYY-GAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIF 65
Query: 401 DIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNLDPFEKYPDYVLWTALQEVELKDMIME 460
+ + + + + I + + +L+ +
Sbjct: 66 NGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSL 125
Query: 461 GAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRTIRK- 519
L + + G S G++Q++ + RA++ +L++DE + + P + I+K
Sbjct: 126 FPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKI 185
Query: 520 KFADCTVLTIAHRLHTIMD-SDKVLVMDSG 548
T+L + + + V+++G
Sbjct: 186 NQEGTTILLVEQNALGALKVAHYGYVLETG 215
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 90.9 bits (225), Expect = 2e-21
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 341 IEFQNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGVIKID 400
IE ++ + ++ + NL++ + E I+G TGAGK+ + I + +I
Sbjct: 2 IEIESLSRKW--KNFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDS-GRIL 58
Query: 401 DIDTEDVPLSKLRSNISIIPQDPVLFSGTLRKNLDPFEKYPDYVLWTALQEVELKDMIME 460
+ LS + +I+ + Q+ LF +++ + + +++ +
Sbjct: 59 LDGKDVTDLSPEKHDIAFVYQNYSLF-----PHMNVKKNLEFGMRMKKIKDPKRVLDTAR 113
Query: 461 GAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRTIRK- 519
+ + S G++Q + LARA+V N IL+LDE + +DP+T + +
Sbjct: 114 DLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVL 173
Query: 520 -KFADCTVLTIAHRLHTIMD-SDKVLVMDSGVAV 551
K TVL I H +D++ V+ G +
Sbjct: 174 HKKNKLTVLHITHDQTEARIMADRIAVVMDGKLI 207
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 84.4 bits (208), Expect = 6e-19
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 340 KIEFQNTNVRYLSGP-RVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGVI 397
+I +N + + G + N+NI I E+ GI+G +GAGK++ + I L G +
Sbjct: 3 RIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGEL 62
Query: 398 KIDDIDTEDVPLSKLRS---NISIIPQDPVLFSG-TLRKNLDPFEKYPDYVLWTALQEVE 453
DD + I ++ Q L+ T +N+ + VE
Sbjct: 63 YFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVE 122
Query: 454 LKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLI 513
+ + ++ + S Q+Q + LARA+V++ +L+LDE +N+D +
Sbjct: 123 ---EVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA 179
Query: 514 QRTIRK--KFADCTVLTIAHRLHTIMD-SDKVLVMDSGVAV 551
+ +++ T+L ++H I +D+V V+ G V
Sbjct: 180 RALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLV 220
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 78.5 bits (193), Expect = 5e-17
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 11/198 (5%)
Query: 359 NLNITIH-PKEKIGIVGRTGAGKSSLIAAIFRLAEV-EGVIKIDDIDTEDVPLSKLRSNI 416
LN+ ++ ++G TGAGKS + I + + G ++++ D PL R I
Sbjct: 15 RLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADI--TPLPPERRGI 72
Query: 417 SIIPQDPVLFSGTLRKNLDPFEKYPDYVLWTALQEVELKDMIMEGAGLNMTVYEGGTNFS 476
+PQD LF + + + E+ + + L+ S
Sbjct: 73 GFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPAR----LS 128
Query: 477 VGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRTIRK--KFADCTVLTIAHRLH 534
G+RQ + LARA+V +L+LDE + VD KT ++ +R + D +L + H L
Sbjct: 129 GGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLI 188
Query: 535 TIMD-SDKVLVMDSGVAV 551
+D+V VM +G V
Sbjct: 189 EAAMLADEVAVMLNGRIV 206
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 62.3 bits (150), Expect = 6e-12
Identities = 16/185 (8%), Positives = 37/185 (20%), Gaps = 28/185 (15%)
Query: 369 KIGIVGRTGAGKSSLIAAIFRLAEV-EGVIKIDDIDTEDVPLSKLRSNISIIPQDPVLFS 427
KI I G G GK++L+ I +++ + I+ + + S
Sbjct: 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSS 61
Query: 428 GTLRKNLDPFEKYPDYVLWTALQEVELKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLAR 487
+
Sbjct: 62 KFFTSKKLVGSYGVN---------------------------VQYFEELAIPILERAYRE 94
Query: 488 AIVRNNVILVLDEATANVDPKTDLLIQRTIRKKFADCTVLTIAHRLHTIMDSDKVLVMDS 547
A ++++DE + V+ ++ +
Sbjct: 95 AKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLVKEIRRLPG 154
Query: 548 GVAVV 552
V +
Sbjct: 155 AVLIE 159
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 55.8 bits (133), Expect = 1e-09
Identities = 20/171 (11%), Positives = 49/171 (28%), Gaps = 9/171 (5%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEG-VIKIDDIDTEDVPLSKLRSNISIIPQDPVLFSG 428
+ + G G GK++LI + + G + + ++ ++ + S
Sbjct: 4 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSR 63
Query: 429 TLRKNLDPFEKYPDYVLWTALQEVELKDMIM-------EGAGLNMTVYEGGTNFSVGQRQ 481
+ + L E + + G G + V + + +
Sbjct: 64 VGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQL 123
Query: 482 LICLARAIVRNNVILVLDEATANVDPKTDLLIQRTIRKKFADCTVLTIAHR 532
I R + ++L L+ + +K +T +R
Sbjct: 124 FIQAVRQTLSTPGTIILGTIPVPKGKPLALV-EEIRNRKDVKVFNVTKENR 173
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 51.4 bits (121), Expect = 1e-07
Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 440 YPDYVLWTALQEVELKDMIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLD 499
V+ A + ++ EG +T GG ++G + ++ + +L+LD
Sbjct: 250 KYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILD 309
Query: 500 EATANVDPKTDLLIQRTIRK-KFADCTVLTIAHRLHTIMDSDKVLVMD-----SGVAVVS 553
E T +D + + + + V+ ++H +D V+ + S V VVS
Sbjct: 310 EPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKDAADHVIRISLENGSSKVEVVS 369
Score = 34.0 bits (76), Expect = 0.051
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 351 LSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAI 387
+ R + + I+G+ G+GKSSL+ AI
Sbjct: 8 VKNFRSHSDTVVEFKEG-INLIIGQNGSGKSSLLDAI 43
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 46.3 bits (108), Expect = 5e-06
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 457 MIMEGAGLNMTVYEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRT 516
++ EG +T GG ++G + ++ + +L+LDE T +D + +
Sbjct: 190 VVWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITI 249
Query: 517 IRK-KFADCTVLTIAHRLHTIMDSDKVLVMD-----SGVAVVS 553
+ + V+ ++H +D V+ + S V VVS
Sbjct: 250 MERYLKKIPQVILVSHDEELKDAADHVIRISLENGSSKVEVVS 292
Score = 36.3 bits (82), Expect = 0.009
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 351 LSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFR 389
+ R + + I+G+ G+GKSSL+ AI
Sbjct: 8 VKNFRSHSDTVVEFKEGI-NLIIGQNGSGKSSLLDAILV 45
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter
MsbA, N-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 319
Score = 38.8 bits (88), Expect = 0.001
Identities = 45/294 (15%), Positives = 105/294 (35%), Gaps = 7/294 (2%)
Query: 32 TAFVEMYGRSTFFKIVNNTINQHHHFHLLSTESYIGIYFSLIVGLFVAGISRSTAFYSAC 91
A + + S ++++ + LL + L++ + S
Sbjct: 28 NAASDTFMLSLLKPLLDDGFGKTDRSVLLW---MPLVVIGLMILRGITSYISSYCISWVS 84
Query: 92 MRCSKGIHKKMFEAVVYSPLAFFSTNPSGRILNRFSKDMGAVDEVLPKAMLDAAQGVMQV 151
+ + +++F ++ P+AFF +G +L+R + D V A++ + +
Sbjct: 85 GKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASI 144
Query: 152 SGALIVSLSVNPLFSIPVLILLYLFWRLSKAYLRTSKSLKYLEGVTRSPVFTHLNACLHG 211
G I+ + SI +++L + + + +S+ T V T L G
Sbjct: 145 IGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKG 204
Query: 212 LPTIRAHGAAKILVEEFDYHQDLHSSTWHLFVYTNMGFAYLIDFLCLLYLSTILISFFFF 271
+ G ++ + FD + V + +I + L L+ +L + F
Sbjct: 205 HKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFP 264
Query: 272 ADIG----GKVGLAVTQTMTLMGVVQWAMRQAAEVENHMISVKRLVEYTKLEPE 321
+ + G + + + + LM ++ A+ + M + + L E E
Sbjct: 265 SVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQE 318
>d2hyda2 f.37.1.1 (A:1-323) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 323
Score = 38.3 bits (87), Expect = 0.002
Identities = 33/288 (11%), Positives = 93/288 (32%), Gaps = 9/288 (3%)
Query: 43 FFKIVNNTINQHHHFHLLSTESYIGIYFSLIVGLFVA-----GISRSTAFYSACMRCSKG 97
K + + +H ++ I + + +FV R +
Sbjct: 36 LIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYD 95
Query: 98 IHKKMFEAVVYSPLAFFSTNPSGRILNRFSKDMGAVDEVLPKAMLDAAQGVMQVSGALIV 157
I KK++ + F++ N G++++R D+ + + +++ + + AL +
Sbjct: 96 IRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSI 155
Query: 158 SLSVNPLFSIPVLILLYLFWRLSKAYLRTSKSLKYLEGVTRSPVFTHLNACLHGLPTIRA 217
++ ++ L + + + + L + V L+ + G+ +++
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 218 HGAAKILVEEFDYHQDLHSSTWHLFVYTNMGFAYLIDFLCLLYLSTILISFFFFADIG-- 275
+ FD + N I+ + + ++ + A G
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 276 --GKVGLAVTQTMTLMGVVQWAMRQAAEVENHMISVKRLVEYTKLEPE 321
G + V L G ++ + + S+ R+ + + +
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYD 323
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 35.4 bits (80), Expect = 0.009
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 4/91 (4%)
Query: 369 KIGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDTEDVPLSKLRSNISIIPQDPVLFSG 428
K+ IVGR GKS+L AI + + I I V +G
Sbjct: 10 KVAIVGRPNVGKSTLFNAILN----KERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAG 65
Query: 429 TLRKNLDPFEKYPDYVLWTALQEVELKDMIM 459
RK+ Y + + +E D+++
Sbjct: 66 LRRKSRVEPRTVEKYSNYRVVDSIEKADVVV 96
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 35.1 bits (79), Expect = 0.009
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
K+ I GR AGKSSL+ A+
Sbjct: 3 KVVIAGRPNAGKSSLLNAL 21
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 35.5 bits (81), Expect = 0.015
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 369 KIGIVGRTGAGKSSLIAAIFRL-AEVEGVIKIDDIDT 404
+ + G TG+GKSS I + + E EG K ++
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEV 94
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 34.5 bits (78), Expect = 0.016
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 370 IGIVGRTGAGKSSLIAAI 387
+G+VG GKS+L++ +
Sbjct: 4 VGLVGFPSVGKSTLLSVV 21
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 34.6 bits (78), Expect = 0.016
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 370 IGIVGRTGAGKSSLIAAI 387
+G+VG AGKSSL+AA+
Sbjct: 4 VGLVGYPNAGKSSLLAAM 21
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 34.2 bits (77), Expect = 0.017
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 369 KIGIVGRTGAGKSSLIAAIFR 389
++ IVG+ GKS+L+ +
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLN 22
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 34.7 bits (78), Expect = 0.018
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 370 IGIVGRTGAGKSSLIAAIFR 389
I GR+ GKS+LI +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTG 22
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 34.3 bits (77), Expect = 0.020
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 370 IGIVGRTGAGKSSLIAAIFR 389
I IVGR GKS+L+ +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLG 27
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 33.9 bits (76), Expect = 0.027
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 370 IGIVGRTGAGKSSLIAAIFR 389
+ IVG+ GKS+L+ +
Sbjct: 8 VAIVGKPNVGKSTLLNNLLG 27
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 33.6 bits (75), Expect = 0.029
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 370 IGIVGRTGAGKSSLIAAIFR 389
+ IVGR GKS+L + +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVK 22
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 33.9 bits (77), Expect = 0.029
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 18/159 (11%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDTEDVPLSKLRSNISIIPQDPVLFSGT 429
+G +G GK++L AAI ++ G K + D + I+I +
Sbjct: 6 VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAA 65
Query: 430 LRKNLDPFEKYPDYVLWTALQEVELKDMI-----MEGAGLNMTVYEGGTNFSVGQRQLIC 484
+ DYV K+MI ++G L + +G + R+ +
Sbjct: 66 RHYAHTDCPGHADYV----------KNMITGTAPLDGCILVVAANDGPMPQT---REHLL 112
Query: 485 LARAIVRNNVILVLDEATANVDPKTDLLIQRTIRKKFAD 523
LAR I +V++ +++A A D + L++ IR+ +
Sbjct: 113 LARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELLTE 151
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 33.2 bits (74), Expect = 0.049
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 369 KIGIVGRTGAGKSSLIAAIFR 389
++ GR+ AGKSS + +
Sbjct: 18 EVAFAGRSNAGKSSALNTLTN 38
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 32.8 bits (73), Expect = 0.062
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 369 KIGIVGRTGAGKSSLIAAIFRLAEVEGV 396
+I + GR+ GKSS I ++ +
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLART 52
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 33.4 bits (75), Expect = 0.065
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
+IG+VG+ GKS+ +A
Sbjct: 2 EIGVVGKPNVGKSTFFSAA 20
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 33.0 bits (74), Expect = 0.071
Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 15/147 (10%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEGVIKI--DDIDTEDVPLS-----KLRSNISIIPQD 422
+ VG G+GK++L R E + D +++P + + I ++
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMRE 62
Query: 423 PVLFSGTLRKNLDPFEKYPDYVLWTALQEVELKDMIMEGAGLNMTVYEGGTNFSVGQRQL 482
+G + ++ D + + L L+ + D ++ E G R +
Sbjct: 63 GYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDT---PGQMETFLFHEFGVRLM 119
Query: 483 ICLARAIVRNNVILVLDEATANVDPKT 509
L +V + + + P
Sbjct: 120 ENLPYPLV-----VYISDPEILKKPND 141
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 32.9 bits (74), Expect = 0.084
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
K GIVG GKS+ AI
Sbjct: 12 KTGIVGMPNVGKSTFFRAI 30
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 33.0 bits (74), Expect = 0.093
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 351 LSGPRVIKNLNITIHPKEKI-GIVGRTGAGKSSLIAAI 387
L G + N + I + IVG G+GKS++ AI
Sbjct: 9 LKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAI 46
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 32.5 bits (73), Expect = 0.10
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 369 KIGIVGRTGAGKSSLIAAIF 388
I ++G+ G GKSS + +I
Sbjct: 34 TILVMGKGGVGKSSTVNSII 53
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 32.0 bits (71), Expect = 0.10
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 11/49 (22%)
Query: 357 IKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDTE 405
KN+N+ GI G GK++L L E+ D +
Sbjct: 3 FKNINL--------GIFGHIDHGKTTLSK---VLTEIASTSAHDKLPES 40
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 31.9 bits (71), Expect = 0.12
Identities = 17/152 (11%), Positives = 42/152 (27%), Gaps = 15/152 (9%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEG----VIKIDDIDTEDVPLSKLRSNISIIPQDPVL 425
+ +G GK++L+ + G +IK D + K + +
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 426 FSG-----TLRKNLDPFEKYPDYVLWTALQEVELKDMIMEGAGLNMTVYEGGTNFSVGQR 480
+ + + D E ++ ++ + +
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDG----- 119
Query: 481 QLICLARAIVRNNVILVLDEATANVD-PKTDL 511
++ +VI V + N+D D+
Sbjct: 120 AGHRPEELVIDRHVIAVASDVPLNLDVALLDI 151
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 32.4 bits (72), Expect = 0.14
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 371 GIVGRTGAGKSSLIAAI 387
I+G G+GKS+++ AI
Sbjct: 29 SIIGPNGSGKSNMMDAI 45
Score = 31.2 bits (69), Expect = 0.37
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 483 ICLARAIVRNNVILVLDEATANVDPKTDLLIQRTIRK-KFADCTVLTIAHRLHTIMDSDK 541
+ A + + VLDE A +D I IR+ + D + I+ + SD
Sbjct: 345 LLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDA 404
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 32.4 bits (73), Expect = 0.14
Identities = 26/202 (12%), Positives = 70/202 (34%), Gaps = 13/202 (6%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDTEDVPLSKLRSNISIIPQDPVLFSGT 429
+ ++ GKS+L ++ + A + K + D + I+I L+S
Sbjct: 20 MSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEM 79
Query: 430 LRKNLDPFEKYPDY------VLWTALQEVELKDMI--MEGAGLNMTVYEGGTNFSVGQRQ 481
+++ ++ D ++ + ++ + + V + V
Sbjct: 80 SDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTET 139
Query: 482 LICLARAIVRNNVILV--LDEATANVDPKTDLLIQRTIRKKFADCTVLTIAHRLHTIMDS 539
++ A V+++ +D A + + + +T + V+ ++ ++
Sbjct: 140 VLRQALGERIKPVVVINKVDRALLELQ-VSKEDLYQTFARTVESVNVI-VSTYADEVLGD 197
Query: 540 DKVLVMDSGVAVVSS-FGFFFS 560
+V VA S G+ F+
Sbjct: 198 VQVYPARGTVAFGSGLHGWAFT 219
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 30.6 bits (68), Expect = 0.27
Identities = 12/67 (17%), Positives = 18/67 (26%), Gaps = 5/67 (7%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEG----VIKIDDIDTE-DVPLSKLRSNISIIPQDPV 424
+VG +GK++L+ A EG +K E P
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGAVAT 63
Query: 425 LFSGTLR 431
G
Sbjct: 64 AVEGDGL 70
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 31.0 bits (69), Expect = 0.34
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 369 KIGIVGRTGAGKSSLIAAIFR 389
++GI G G GKS+ I A+
Sbjct: 53 RVGITGVPGVGKSTTIDALGS 73
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 31.1 bits (70), Expect = 0.34
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
K GIVG GKS+L A+
Sbjct: 4 KCGIVGLPNVGKSTLFNAL 22
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 30.4 bits (67), Expect = 0.35
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
K+ +G AGK++L+ +
Sbjct: 2 KLLFLGLDNAGKTTLLHML 20
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 31.2 bits (69), Expect = 0.38
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 372 IVGRTGAGKSSLIAAI 387
IVG G+GKS++I AI
Sbjct: 29 IVGPNGSGKSNIIDAI 44
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 30.4 bits (67), Expect = 0.40
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
+I I+G GAGK++++ +
Sbjct: 7 RILILGLDGAGKTTILYRL 25
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 30.0 bits (66), Expect = 0.53
Identities = 5/22 (22%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 367 KE-KIGIVGRTGAGKSSLIAAI 387
+E ++ ++G AGK++++
Sbjct: 1 RELRLLMLGLDNAGKTTILKKF 22
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 30.2 bits (67), Expect = 0.67
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 369 KIGIVGRTGAGKSSLIAAIFRL 390
++G+ G GAGKS+ + A L
Sbjct: 56 RLGVTGTPGAGKSTFLEAFGML 77
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 29.7 bits (65), Expect = 0.69
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
++ +VG +GK++ + I
Sbjct: 4 ELTLVGLQYSGKTTFVNVI 22
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 30.0 bits (66), Expect = 0.76
Identities = 12/80 (15%), Positives = 27/80 (33%)
Query: 364 IHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDTEDVPLSKLRSNISIIPQDP 423
E I + +G GKS+ + K+ E+ I + +
Sbjct: 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLIGLHNRVR 91
Query: 424 VLFSGTLRKNLDPFEKYPDY 443
+ S +L++ + K+ +
Sbjct: 92 LRQSDSLKREIIENGKFDQW 111
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 29.6 bits (65), Expect = 0.96
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 355 RVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAI 387
+ + G GAGKS+ +AA
Sbjct: 13 NGFFARTFDLDEL-VTTLSGGNGAGKSTTMAAF 44
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 29.5 bits (65), Expect = 0.97
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 10/50 (20%)
Query: 366 PKEK----IGIVGRTGAGKSSLIAAI------FRLAEVEGVIKIDDIDTE 405
PK + IG+VG GK++L+ AI E++ + I E
Sbjct: 3 PKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGMTIKLGYAE 52
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 28.8 bits (63), Expect = 1.4
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
+ VG +GK+ L +
Sbjct: 2 AVLFVGLCDSGKTLLFVRL 20
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 28.9 bits (63), Expect = 1.5
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 370 IGIVGRTGAGKSSLIAAI 387
+ ++G GK++L+ I
Sbjct: 8 VSVLGHVDHGKTTLLDHI 25
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 29.1 bits (65), Expect = 1.5
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEG----VIKIDD 401
I + G +GAG S++ ++ EG I+ D
Sbjct: 7 ISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDA 42
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 28.8 bits (63), Expect = 1.5
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 367 KEKIGIVGRTGAGKSSLIAAI 387
+ I I G +GK+SL+ +
Sbjct: 3 QPSIIIAGPQNSGKTSLLTLL 23
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 28.5 bits (62), Expect = 1.5
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
+I +VG AGK++++ +
Sbjct: 2 RILMVGLDAAGKTTILYKL 20
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 28.6 bits (62), Expect = 1.6
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEGVIKID 400
+GI G + +GK++L + + +G+
Sbjct: 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCV 55
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 28.9 bits (65), Expect = 1.7
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 353 GPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFR-LAEVEGVIKI 399
G +V+ +L KIG+ G G GK+ LI + +A+ G +
Sbjct: 55 GIKVV-DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSV 101
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.5 bits (62), Expect = 1.7
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
K+ +G AGK++L+ +
Sbjct: 15 KLVFLGLDNAGKTTLLHML 33
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 28.4 bits (63), Expect = 1.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEG 395
+G +G GK++L AA+ +A E
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAEN 31
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 28.4 bits (62), Expect = 1.8
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 366 PKEKIGIVGRTGAGKSSLI 384
P+ ++G++G +GKSSLI
Sbjct: 4 PELRLGVLGDARSGKSSLI 22
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 28.1 bits (61), Expect = 1.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ I+G +G GK+SL+
Sbjct: 4 KVIILGDSGVGKTSLM 19
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 28.6 bits (64), Expect = 1.9
Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 353 GPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFR 389
G + + + + I ++ I+G GK+S+
Sbjct: 55 GIKAV-DSLVPIGRGQRELIIGDRQTGKTSIAIDTII 90
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 28.1 bits (61), Expect = 2.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ I+G +G GK+SL+
Sbjct: 4 KVIILGDSGVGKTSLM 19
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 28.0 bits (61), Expect = 2.1
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 356 VIKNLNITIHPKEKIGIVGRTGAGKSSLI 384
+++ L + +I ++G AGK++L+
Sbjct: 5 ILRKLKSAPDQEVRILLLGLDNAGKTTLL 33
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 28.3 bits (62), Expect = 2.4
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 7/43 (16%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLA-------EVEGVIKIDDIDTE 405
+ +VG G+GK++L A+ VE D E
Sbjct: 5 VALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPE 47
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 27.7 bits (61), Expect = 2.4
Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 369 KIGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDTEDVPLSKLRSNISIIPQDPVLFSG 428
+I ++G + L+ + ++E + ++ D ++ + + + +D
Sbjct: 2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI 61
Query: 429 TLRKNLDPFEKYPDYVLWTA----LQEVELKDMIMEGAGLNMTVYEGGTNFSVGQRQL 482
+ + YV++ L+ E + I GL G FS R
Sbjct: 62 S--DTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAF 117
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 28.2 bits (61), Expect = 2.6
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDTED 406
++G GKSS+I + + E
Sbjct: 32 TLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEER 68
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.7 bits (60), Expect = 2.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ +VG G GKS+L
Sbjct: 8 KLVVVGGGGVGKSALT 23
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 28.0 bits (61), Expect = 2.6
Identities = 6/35 (17%), Positives = 10/35 (28%), Gaps = 3/35 (8%)
Query: 369 KIGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDID 403
I + G +GK + A +K
Sbjct: 3 LIFLSGVKRSGKDT-TADFI--MSNYSAVKYQLAG 34
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 27.9 bits (61), Expect = 2.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 369 KIGIVGRTGAGKSSLI 384
KI I+G +G GKSSL+
Sbjct: 9 KILIIGESGVGKSSLL 24
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1
ATP synthase {Spinach (Spinacia oleracea), chloroplast
[TaxId: 3562]}
Length = 276
Score = 28.4 bits (63), Expect = 2.7
Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 353 GPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEGVI 397
G I + I + ++ I+G GK+++ + + VI
Sbjct: 54 GLIAI-DAMIPVGRGQRELIIGDRQTGKTAVATDTILNQQGQNVI 97
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 27.7 bits (60), Expect = 2.8
Identities = 7/20 (35%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Query: 366 PKE-KIGIVGRTGAGKSSLI 384
P+ K +VG GK+ L+
Sbjct: 3 PQAIKCVVVGDGAVGKTCLL 22
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 2.8
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 369 KIGIVGRTGAGKSSLIAAI 387
K+ IVG AGK++++
Sbjct: 17 KVIIVGLDNAGKTTILYQF 35
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 27.7 bits (60), Expect = 2.9
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 370 IGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDI 402
I G G GKS+ + + I+ D I
Sbjct: 5 YIITGPAGVGKSTTCKRLAAQLDNSAYIEGDII 37
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.5 bits (60), Expect = 2.9
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
KI I+G + GK+S +
Sbjct: 7 KILIIGNSSVGKTSFL 22
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.4 bits (59), Expect = 3.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ +VG GKSS+I
Sbjct: 4 KMVVVGNGAVGKSSMI 19
>d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium
[TaxId: 1404]}
Length = 371
Score = 27.9 bits (62), Expect = 3.5
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 16/64 (25%)
Query: 353 GPRVIKNLNITIHPKEKI----------------GIVGRTGAGKSSLIAAIFRLAEVEGV 396
GP+ + NL IT H E G++G TG S +I + + + +
Sbjct: 131 GPKAVDNLLITRHLFELQPESVQDGFRPVSAIVPGVMGMTGIETSDIIFGVVKKVNPDFI 190
Query: 397 IKID 400
I ID
Sbjct: 191 IAID 194
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal
domain {Penicillium sp. [TaxId: 5081]}
Length = 354
Score = 27.8 bits (61), Expect = 3.6
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 435 DPFEKYPDYVLWTALQEVELKDMIMEG-AGLNMTVYEGGTNF 475
+L + V K+ G A LN+ + GGTN+
Sbjct: 270 GVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNW 311
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 27.4 bits (59), Expect = 3.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G G GKS+L
Sbjct: 3 KVLLLGAPGVGKSALA 18
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 27.6 bits (60), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 370 IGIVGRTGAGKSSLIAAI 387
IG+VG GK++L A+
Sbjct: 8 IGMVGHVDHGKTTLTKAL 25
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 27.9 bits (61), Expect = 3.9
Identities = 29/236 (12%), Positives = 70/236 (29%), Gaps = 23/236 (9%)
Query: 369 KIGIVGRTGAGKSSLIAAI-------------------FRLAEVEGVIKIDDIDTEDVPL 409
+I +VG +GKSS++ I +L + L
Sbjct: 26 QIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIADDGSQTQEWGEFL 85
Query: 410 SKLRSNISIIPQDPVLFSGTLRKNLDPFEKYPDYVLWTALQEVELKDM-IMEGAGLNMTV 468
K + + + + + + ++ +++ G+
Sbjct: 86 HKPNDMFYDFSEIREEIIRDTDRMTGKNKGISAQPINLKIYSPHVVNLTLVDLPGITKVP 145
Query: 469 YEGGTNFSVGQRQLICLARAIVRNNVILVLDEATANVDPKTDLLIQRTIRKKFADCTVLT 528
Q + + +A +N +I+ + AN D +Q +
Sbjct: 146 VGDQPTDIEQQIRRMVMAYIKKQNAIIVAVTP--ANTDLANSDALQLAKEVDPEGKRTIG 203
Query: 529 IAHRLHTIMDSDKVLVMDSGVAVVSSFGFFFSKDLIEGTVSAKVLSSRKRREKEDR 584
+ +L + + + +G + + GF + + + AK S R+ + E
Sbjct: 204 VITKLDLMDKGTDAMEVLTGRVIPLTLGFIGVINRSQEDIIAKK-SIRESLKSEIL 258
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 27.4 bits (59), Expect = 4.1
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
++ ++G G GKS+L
Sbjct: 5 RVVLIGEQGVGKSTLA 20
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 27.7 bits (61), Expect = 4.1
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 7/45 (15%)
Query: 370 IGIVGRTGAGKSSLIAAI-------FRLAEVEGVIKIDDIDTEDV 407
IGI AGK++ I ++ EV D ++
Sbjct: 9 IGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQER 53
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 27.0 bits (58), Expect = 4.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 369 KIGIVGRTGAGKSSLI 384
KI I+G GKSSL
Sbjct: 6 KIAILGYRSVGKSSLT 21
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 27.3 bits (59), Expect = 4.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ IVG GK+ L+
Sbjct: 4 KLVIVGDGACGKTCLL 19
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.3 bits (59), Expect = 4.3
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 365 HPKEKIGIVGRTGAGKSSLIAAI 387
+ + I+G +GKS L+ +
Sbjct: 5 FFAKTVAILGGESSGKSVLVNKL 27
>d1iwga3 d.58.44.1 (A:567-673) Multidrug efflux transporter AcrB
pore domain; PN1, PN2, PC1 and PC2 subdomains
{Escherichia coli [TaxId: 562]}
Length = 107
Score = 26.5 bits (58), Expect = 4.4
Identities = 10/53 (18%), Positives = 16/53 (30%)
Query: 118 PSGRILNRFSKDMGAVDEVLPKAMLDAAQGVMQVSGALIVSLSVNPLFSIPVL 170
P+G R K + V + + V V+G N + L
Sbjct: 13 PAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNTGIAFVSL 65
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 27.2 bits (59), Expect = 4.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 369 KIGIVGRTGAGKSSLI 384
K ++G G GKS L+
Sbjct: 7 KFLVIGNAGTGKSCLL 22
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 27.0 bits (59), Expect = 4.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
KI ++G +G GKS L+
Sbjct: 4 KILLIGDSGVGKSCLL 19
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 27.1 bits (59), Expect = 4.6
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G +G GKS+L+
Sbjct: 6 KVVLIGDSGVGKSNLL 21
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 27.1 bits (59), Expect = 4.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ +VG +G GK+ L+
Sbjct: 8 KVMLVGDSGVGKTCLL 23
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 26.8 bits (58), Expect = 4.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 366 PKEKIGIVGRTGAGKSSLI 384
K+ +VG G GKS+L
Sbjct: 3 ALHKVIMVGSGGVGKSALT 21
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 26.9 bits (58), Expect = 4.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 366 PKEKIGIVGRTGAGKSSLI 384
P K+ +VG G GKS+L
Sbjct: 3 PTYKLVVVGDGGVGKSALT 21
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.9 bits (58), Expect = 4.8
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G GKSS++
Sbjct: 5 KLVLLGEAAVGKSSIV 20
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 27.1 bits (59), Expect = 4.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G +G GKS L+
Sbjct: 8 KLLLIGNSGVGKSCLL 23
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 27.2 bits (59), Expect = 4.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 370 IGIVGRTGAGKSSLIAAIFRL 390
IG+ G T +GKSS+ A I +L
Sbjct: 5 IGVSGGTASGKSSVCAKIVQL 25
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 27.3 bits (60), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 360 LNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEG 395
LN+ I +VG G GK++ I + R E +G
Sbjct: 2 LNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQG 37
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 27.0 bits (59), Expect = 5.1
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G +G GK+ ++
Sbjct: 8 KLLLIGDSGVGKTCVL 23
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.9 bits (58), Expect = 5.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G TG GKSS++
Sbjct: 6 KVCLLGDTGVGKSSIM 21
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 26.9 bits (58), Expect = 5.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ I GR G GKS+L+
Sbjct: 4 KLAIFGRAGVGKSALV 19
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.9 bits (58), Expect = 5.3
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 367 KEKIGIVGRTGAGKSSLI 384
K KI +VG + GK++L+
Sbjct: 2 KCKIVVVGDSQCGKTALL 19
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.7 bits (58), Expect = 5.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
KI ++G G GK+ L+
Sbjct: 7 KIVLIGNAGVGKTCLV 22
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 26.8 bits (58), Expect = 5.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ +G GK+SLI
Sbjct: 2 KLVFLGEQSVGKTSLI 17
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.8 bits (58), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G G GKS+L
Sbjct: 5 KVVVLGSGGVGKSALT 20
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 27.3 bits (60), Expect = 5.6
Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Query: 367 KEK----IGIVGRTGAGKSSLIAAI 387
KEK + ++G +GKS+ +
Sbjct: 2 KEKSHINVVVIGHVDSGKSTTTGHL 26
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.9 bits (58), Expect = 5.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ +VG G GK++ +
Sbjct: 5 KLVLVGDGGTGKTTFV 20
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 27.0 bits (59), Expect = 5.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 358 KNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEVEG 395
LN+ P I +VG G GK++ + ++ EG
Sbjct: 2 TKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEG 39
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 26.9 bits (58), Expect = 5.9
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 369 KIGIVGRTGAGKSSLI 384
K +VG GK+ L+
Sbjct: 5 KCVVVGDGAVGKTCLL 20
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.9 bits (58), Expect = 6.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
++ + G G GKSSL+
Sbjct: 4 RVAVFGAGGVGKSSLV 19
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.5 bits (57), Expect = 6.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G + GKSSL+
Sbjct: 8 KLVLLGESAVGKSSLV 23
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.5 bits (57), Expect = 6.2
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 369 KIGIVGRTGAGKSSLI 384
KI ++G + GK+ L
Sbjct: 4 KIIVIGDSNVGKTCLT 19
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 26.8 bits (58), Expect = 6.2
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ +G +G GK++ +
Sbjct: 7 KLLALGDSGVGKTTFL 22
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.5 bits (57), Expect = 6.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
++ +VG G GKS+L
Sbjct: 7 RLVVVGGGGVGKSALT 22
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 26.9 bits (58), Expect = 6.5
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 369 KIGIVGRTGAGKSSLI 384
K +VG GK+ L+
Sbjct: 11 KCVVVGDGAVGKTCLL 26
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 26.7 bits (58), Expect = 6.6
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 370 IGIVGRTGAGKSSLIAAI 387
+ ++G GKS+L+ +
Sbjct: 6 LIVIGHVDHGKSTLVGRL 23
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.5 bits (57), Expect = 6.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ +VG G GKS+L
Sbjct: 5 KLVVVGAGGVGKSALT 20
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 26.5 bits (57), Expect = 7.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G G GKSSL+
Sbjct: 8 KVILLGDGGVGKSSLM 23
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 26.9 bits (59), Expect = 7.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 344 QNTNVRYLSGPRVIKNLNITIHPKEKIGIVGRTGAGKSSLIAAIFRLAEV 393
+NTN R ++ P +K L+ P + IVG GKS L+ + +
Sbjct: 9 ENTNGRLMANPEALKILSAITQPMVVVAIVGLYRTGKSYLMNKLAGKKKG 58
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.4 bits (57), Expect = 7.3
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G GK+SL+
Sbjct: 5 KVVLLGEGCVGKTSLV 20
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.5 bits (57), Expect = 7.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K+ ++G G GKS+L
Sbjct: 5 KLVVLGSGGVGKSALT 20
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 26.9 bits (58), Expect = 7.7
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 364 IHPKEKIGIVGRTGAGKSSLIAAI 387
+ +V GAGKS L +
Sbjct: 26 MVAGTVGALVSPGGAGKSMLALQL 49
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 26.4 bits (57), Expect = 8.0
Identities = 4/25 (16%), Positives = 12/25 (48%)
Query: 365 HPKEKIGIVGRTGAGKSSLIAAIFR 389
H ++ + ++G G G+ + +
Sbjct: 1 HMRKTLVLLGAHGVGRRHIKNTLIT 25
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 26.4 bits (57), Expect = 8.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 369 KIGIVGRTGAGKSSLI 384
K I+G G GKS L+
Sbjct: 6 KYIIIGDMGVGKSCLL 21
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.4 bits (57), Expect = 8.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 369 KIGIVGRTGAGKSSLI 384
K I+G TG GKS L+
Sbjct: 5 KYIIIGDTGVGKSCLL 20
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 26.4 bits (57), Expect = 9.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 370 IGIVGRTGAGKSSLIAAI 387
I +G AGKS+L I
Sbjct: 27 IVFIGHVDAGKSTLGGNI 44
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 25.8 bits (55), Expect = 9.5
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 367 KEKIGIVGRTGAGKSSLIAAIFRLAEVEGVIKIDDIDT 404
K+ I +G G+GKS+ +A+ G I+ D
Sbjct: 2 KKIILTIGCPGSGKSTWAREF--IAKNPGFYNINRDDY 37
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.1 bits (56), Expect = 9.8
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 369 KIGIVGRTGAGKSSLI 384
+I ++G AGK++++
Sbjct: 14 RILMLGLDAAGKTTIL 29
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.137 0.395
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,187,585
Number of extensions: 105362
Number of successful extensions: 528
Number of sequences better than 10.0: 1
Number of HSP's gapped: 490
Number of HSP's successfully gapped: 161
Length of query: 597
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 507
Effective length of database: 1,171,896
Effective search space: 594151272
Effective search space used: 594151272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.1 bits)