BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15027
(314 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2E9F|A Chain A, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase
Complexed With L-arginine
pdb|2E9F|C Chain C, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase
Complexed With L-arginine
pdb|2E9F|D Chain D, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase
Complexed With L-arginine
pdb|2E9F|B Chain B, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase
Complexed With L-arginine
Length = 462
Score = 243 bits (621), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 164/248 (66%)
Query: 51 TTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP 110
T PIDR+ T L F +P NSLD+++ RDF +E LS +I ++HLSR++EE I++
Sbjct: 206 TGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEVLSALNIGMLHLSRMAEELILYSTE 265
Query: 111 QFDYVSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQ 170
+F +V +PD+ TGSSIMPQKKNPDILELIR K GRV G + ++K PLAYNKD+Q
Sbjct: 266 EFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGLPLAYNKDLQ 325
Query: 171 ECKQPLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFR 230
E K+PL+D++ T L +L +K+ RM+ +A G+++AT++ADYLA+K +PFR
Sbjct: 326 EDKEPLLDALATYRDSLRLLAALLPGLKWRRERMWRAAEGGYTLATELADYLAEKGLPFR 385
Query: 231 SCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAP 290
H +VG++++ V+E + L L+LEEL+A H ED +L +E ++ + G TAP
Sbjct: 386 EAHHVVGRLVRRLVEEGRALKDLTLEELQAHHPLFAEDALPLLRLETAIHRRRSYGGTAP 445
Query: 291 SQVQHSVD 298
V+ ++
Sbjct: 446 EAVRERLE 453
>pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A
Resolution Of Argininosuccinate Lyase From E. Coli
pdb|1TJ7|B Chain B, Structure Determination And Refinement At 2.44 A
Resolution Of Argininosuccinate Lyase From E. Coli
Length = 457
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 158/247 (63%)
Query: 51 TTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP 110
T + IDR + L F S + NSLDS+SDRD ++E LS +I ++HLSR +E+ I F
Sbjct: 203 TAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTG 262
Query: 111 QFDYVSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQ 170
+ +V L D + +GSS+MPQKKNPD LELIRGK GRV G L M+ +K PLAYNKDMQ
Sbjct: 263 EAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQ 322
Query: 171 ECKQPLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFR 230
E K+ L D+++T CL L+LD ++ R +A +G++ AT++ADYL K +PFR
Sbjct: 323 EDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFR 382
Query: 231 SCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAP 290
H IVG+ + +++ KPL+ L L EL+ + I ED++ ILS++ ++ + G +P
Sbjct: 383 EAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSP 442
Query: 291 SQVQHSV 297
QV ++
Sbjct: 443 QQVAQAI 449
>pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
pdb|1K7W|B Chain B, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
pdb|1K7W|C Chain C, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
pdb|1K7W|D Chain D, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant
Length = 468
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 151/251 (60%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 213 IDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGF 272
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TG+S+MPQKKNPD LELIR K GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 273 LTLSDAFSTGASLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKE 332
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
+ D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 333 AVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGVPFRQAHT 391
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + +++LSLE+LK+I D+ ++ + SVE +G TA S V
Sbjct: 392 ASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVT 451
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 452 TQIEQLRELMK 462
>pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin
(Eye Lens Protein)
pdb|1HY0|B Chain B, Crystal Structure Of Wild Type Duck Delta 1 Crystallin
(Eye Lens Protein)
Length = 466
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 152/251 (60%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 211 IDREMLRSELEFASISLNSMDAISERDFVVEFLSVATLLLIHLSKMAEDLIIYSTSEFGF 270
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TGSS+MPQKKNPD LELIR K+GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 271 LTLSDAFSTGSSLMPQKKNPDSLELIRSKSGRVFGRLASILMVLKGLPSTYNKDLQEDKE 330
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
++D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 331 AVIDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGMPFRQAHT 389
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + ++ L+LE+LK+I D+ ++ + SVE +G TA S V
Sbjct: 390 ASGKAVHLAETKGIAINNLTLEDLKSISPLFSSDVSQVFNFVNSVEQYTALGGTAKSSVT 449
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 450 TQIEQLRELMK 460
>pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop
Mutant (Dlm)
pdb|1U15|B Chain B, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop
Mutant (Dlm)
pdb|1U15|C Chain C, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop
Mutant (Dlm)
pdb|1U15|D Chain D, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop
Mutant (Dlm)
pdb|1U16|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop
Mutant (Dlm) In Complex With Sulfate
Length = 472
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 151/251 (60%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 211 IDREMLRSELEFASISLNSMDAISERDFVVEFLSVATLLLIHLSKMAEDLIIYSTSEFGF 270
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TGSS+MPQKKNPD LELIR K GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 271 LTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKE 330
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
++D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 331 AVIDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGMPFRQAHT 389
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + ++ L+LE+LK+I D+ ++ + SVE +G TA S V
Sbjct: 390 ASGKAVHLAETKGIAINNLTLEDLKSISPLFSSDVSQVFNFVNSVEQYTALGGTAKSSVT 449
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 450 TQIEQLRELMK 460
>pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
pdb|1TJU|B Chain B, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
pdb|1TJU|C Chain C, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
pdb|1TJU|D Chain D, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant
Length = 474
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 150/251 (59%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 213 IDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGF 272
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TGSS+MPQKKNPD LELIR K GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 273 LTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKE 332
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
+ D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 333 AVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGVPFRQAHT 391
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + +++LSLE+LK+I D+ ++ + SVE + TA S V
Sbjct: 392 ASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVT 451
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 452 TQIEQLRELMK 462
>pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
pdb|1HY1|B Chain B, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
pdb|1HY1|C Chain C, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
pdb|1HY1|D Chain D, Crystal Structure Of Wild Type Duck Delta 2 Crystallin
(Eye Lens Protein)
Length = 468
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 150/251 (59%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 213 IDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGF 272
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TGSS+MPQKKNPD LELIR K GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 273 LTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKE 332
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
+ D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 333 AVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGVPFRQAHT 391
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + +++LSLE+LK+I D+ ++ + SVE + TA S V
Sbjct: 392 ASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVT 451
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 452 TQIEQLRELMK 462
>pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJV|B Chain B, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJV|C Chain C, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJV|D Chain D, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
pdb|1TJW|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
pdb|1TJW|B Chain B, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
pdb|1TJW|C Chain C, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
pdb|1TJW|D Chain D, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant
With Bound Argininosuccinate
Length = 474
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 150/251 (59%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 213 IDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGF 272
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TGSS+MPQKKNPD LELIR K GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 273 LTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKE 332
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
+ D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 333 AVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGVPFRQAHT 391
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + +++LSLE+LK+I D+ ++ + SVE + TA S V
Sbjct: 392 ASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVT 451
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 452 TQIEQLRELMK 462
>pdb|1DCN|A Chain A, Inactive Mutant H162n Of Delta 2 Crystallin With Bound
Argininosuccinate
pdb|1DCN|B Chain B, Inactive Mutant H162n Of Delta 2 Crystallin With Bound
Argininosuccinate
pdb|1DCN|C Chain C, Inactive Mutant H162n Of Delta 2 Crystallin With Bound
Argininosuccinate
pdb|1DCN|D Chain D, Inactive Mutant H162n Of Delta 2 Crystallin With Bound
Argininosuccinate
Length = 447
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 150/251 (59%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 195 IDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGF 254
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TGSS+MPQKKNPD LELIR K+GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 255 LTLSDAFSTGSSLMPQKKNPDSLELIRSKSGRVFGRLASILMVLKGLPSTYNKDLQEDKE 314
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
+ D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 315 AVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGVPFRQAHT 373
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + ++ LSLE+LK+I D+ ++ + SVE + TA S V
Sbjct: 374 ASGKAVHLAETKGITINNLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTALAGTAKSSVT 433
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 434 TQIEQLRELMK 444
>pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck
pdb|1AUW|B Chain B, H91n Delta 2 Crystallin From Duck
pdb|1AUW|C Chain C, H91n Delta 2 Crystallin From Duck
pdb|1AUW|D Chain D, H91n Delta 2 Crystallin From Duck
Length = 468
Score = 187 bits (474), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 150/251 (59%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 213 IDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGF 272
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++ D+ TGSS+MPQKKNPD LELIR K GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 273 LTDSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKE 332
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
+ D ++TL L ++ ++ + M + +ATD+A YL +K +PFR H
Sbjct: 333 AVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LATDLALYLVRKGVPFRQAHT 391
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + +++LSLE+LK+I D+ ++ + SVE +G TA S V
Sbjct: 392 ASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTALGGTAKSSVT 451
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 452 TQIEQLRELMK 462
>pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin
pdb|1XWO|B Chain B, Crystal Structrue Of Goose Delta Crystallin
pdb|1XWO|C Chain C, Crystal Structrue Of Goose Delta Crystallin
pdb|1XWO|D Chain D, Crystal Structrue Of Goose Delta Crystallin
Length = 465
Score = 184 bits (466), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 150/251 (59%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L F S S NS+D+IS+RDF++EFLS ++ ++HLS+++E+ II+ +F +
Sbjct: 210 IDREMLRSELDFASISLNSMDAISERDFVVEFLSVATLLMIHLSKMAEDLIIYSTSEFGF 269
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
++L D+ TGSS+MPQKKNPD LELIR K GRV+G L ++L ++K P YNKD+QE K+
Sbjct: 270 LTLSDAFSTGSSLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKE 329
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
+ D ++TL L ++ ++ + M + ++TD+A YL +K +PFR H
Sbjct: 330 AVFDVVDTLTAVLQVATGVISTLQISKENMEKALTPEM-LSTDLALYLVRKGMPFRQAHT 388
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + ++ L+LE+LK+I D+ ++ + SVE +G TA S V
Sbjct: 389 ASGKAVHLAETKGITINNLTLEDLKSISPLFSSDVSQVFNFVNSVEQYTAMGGTAKSSVT 448
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 449 TQIEHLRELMK 459
>pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin
(Eye Lens Protein)
pdb|1I0A|B Chain B, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin
(Eye Lens Protein)
pdb|1I0A|C Chain C, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin
(Eye Lens Protein)
pdb|1I0A|D Chain D, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin
(Eye Lens Protein)
Length = 466
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 147/251 (58%), Gaps = 1/251 (0%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
IDR L S + NS+D+IS+RDF++E +S ++ ++HLS+++E+ IIF +F +
Sbjct: 211 IDRELLRSELDMTSITLNSIDAISERDFVVELISVATLLMIHLSKLAEDLIIFSTTEFGF 270
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
V+L D+ TGSS++PQKKNPD LELIR K GRV+G L +L ++K P ++KD+QE K+
Sbjct: 271 VTLSDAYSTGSSLLPQKKNPDSLELIRSKAGRVFGRLAAILMVLKGIPSTFSKDLQEDKE 330
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHE 234
++D ++TL L ++ ++ N M + ++TD+A YL +K +P R
Sbjct: 331 AVLDVVDTLTAVLQVATGVISTLQINKENMEKALTPEL-LSTDLALYLVRKGMPIRQAQT 389
Query: 235 IVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPSQVQ 294
GK + + ++ L+LE+LK+I D+ ++ SV SVE VG TA S V
Sbjct: 390 ASGKAVHLAETKGITINNLTLEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTAKSSVT 449
Query: 295 HSVDVFENFVK 305
++ +K
Sbjct: 450 AQIEQLRELLK 460
>pdb|1AOS|A Chain A, Human Argininosuccinate Lyase
pdb|1AOS|B Chain B, Human Argininosuccinate Lyase
Length = 464
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 141/246 (57%), Gaps = 7/246 (2%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
+DR L+F + + NS+D+ S+RDF+ EFL S+ + HLSR++E+ I++ +F +
Sbjct: 211 VDRELLRAELNFGAITLNSMDATSERDFVAEFLFWRSLCMTHLSRMAEDLILYCTKEFSF 270
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
V L D+ TGSS+MPQKKNPD LELIR K GRV+G +L +K P YNKD+QE K+
Sbjct: 271 VQLSDAYSTGSSLMPQKKNPDSLELIRSKAGRVFGRCAGLLMTLKGLPSTYNKDLQEDKE 330
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFS---IATDIADYLAKKKIPFRS 231
+ + +T++ L ++ ++ + M G+ S +ATD+A YL +K +PFR
Sbjct: 331 AVFEVSDTMSAVLQVATGVISTLQIHQENM----GQALSPDMLATDLAYYLVRKGMPFRQ 386
Query: 232 CHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPS 291
HE GK + + L+QLSL+EL+ I D+ + SVE +G TA S
Sbjct: 387 AHEASGKAVFMAETKGVALNQLSLQELQTISPLFSGDVICVWDYRHSVEQYGALGGTARS 446
Query: 292 QVQHSV 297
V +
Sbjct: 447 SVDWQI 452
>pdb|1K62|A Chain A, Crystal Structure Of The Human Argininosuccinate Lyase
Q286r Mutant
pdb|1K62|B Chain B, Crystal Structure Of The Human Argininosuccinate Lyase
Q286r Mutant
Length = 464
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 141/246 (57%), Gaps = 7/246 (2%)
Query: 55 IDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114
+DR L+F + + NS+D+ S+RDF+ EFL S+ + HLSR++E+ I++ +F +
Sbjct: 211 VDRELLRAELNFGAITLNSMDATSERDFVAEFLFWRSLCMTHLSRMAEDLILYCTKEFSF 270
Query: 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ 174
V L D+ TGSS+MP+KKNPD LELIR K GRV+G +L +K P YNKD+QE K+
Sbjct: 271 VQLSDAYSTGSSLMPRKKNPDSLELIRSKAGRVFGRCAGLLMTLKGLPSTYNKDLQEDKE 330
Query: 175 PLVDSIETLNMCLTAFKLILDNVKFNTGRMYVSAGEGFS---IATDIADYLAKKKIPFRS 231
+ + +T++ L ++ ++ + M G+ S +ATD+A YL +K +PFR
Sbjct: 331 AVFEVSDTMSAVLQVATGVISTLQIHQENM----GQALSPDMLATDLAYYLVRKGMPFRQ 386
Query: 232 CHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATAPS 291
HE GK + + L+QLSL+EL+ I D+ + SVE +G TA S
Sbjct: 387 AHEASGKAVFMAETKGVALNQLSLQELQTISPLFSGDVICVWDYRHSVEQYGALGGTARS 446
Query: 292 QVQHSV 297
V +
Sbjct: 447 SVDWQI 452
>pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate
Lactonizing Enzyme From Pseudomonas Putida
pdb|1RE5|B Chain B, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate
Lactonizing Enzyme From Pseudomonas Putida
pdb|1RE5|C Chain C, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate
Lactonizing Enzyme From Pseudomonas Putida
pdb|1RE5|D Chain D, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate
Lactonizing Enzyme From Pseudomonas Putida
Length = 450
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 78 SDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYVSLPDS-LLTGSSIMPQKKNPDI 136
+ RD ++EF S + L + + + M + V P + GSS MP K+NP
Sbjct: 228 TQRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEAGEVFEPSAPGKGGSSTMPHKRNPVG 287
Query: 137 LELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDM---QECKQPLVDSIETLNMCLTAFKLI 193
++ G RV G L + M P + + + + L D ++ L ++I
Sbjct: 288 AAVLIGAATRVPGLLSTLFAAM---PQEHERSLGLWHAEWETLPDICCLVSGALRQAQVI 344
Query: 194 LDNVKFNTGRMY--VSAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLD 251
+ ++ + RM + +G +A ++ LA++ R+ H ++ + + V E + L
Sbjct: 345 AEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQRLGRDRA-HHLLEQCCQRAVAEQRHLR 403
Query: 252 QLSLEELKAIHEDIGEDIFEIL 273
+ +E + E GE++ +L
Sbjct: 404 AVLGDEPQVSAELSGEELDRLL 425
>pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium
Marinum
pdb|3QBP|B Chain B, Crystal Structure Of Fumarase Fum From Mycobacterium
Marinum
pdb|3QBP|C Chain C, Crystal Structure Of Fumarase Fum From Mycobacterium
Marinum
pdb|3QBP|D Chain D, Crystal Structure Of Fumarase Fum From Mycobacterium
Marinum
Length = 478
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 70 SGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ----FDYVSLPDSLLTGS 125
+ NS ++ + RD ++E + L++I+ + I +M + LPD L GS
Sbjct: 270 AANSFEAQAARDGLVEASGALRTIAVSLTKIAND-IRWMGSGPLTGLAEIQLPD-LQPGS 327
Query: 126 SIMPQKKNPDILELIRGKTGRVYGN 150
SIMP K NP + E + +V GN
Sbjct: 328 SIMPGKVNPVLPEAVTQVAAQVIGN 352
>pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From
Mycobacterium Tuberculosis
pdb|3NO9|B Chain B, Crystal Structure Of Apo Fumarate Hydratase From
Mycobacterium Tuberculosis
pdb|3NO9|C Chain C, Crystal Structure Of Apo Fumarate Hydratase From
Mycobacterium Tuberculosis
pdb|3NO9|D Chain D, Crystal Structure Of Apo Fumarate Hydratase From
Mycobacterium Tuberculosis
Length = 475
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 70 SGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ----FDYVSLPDSLLTGS 125
+ NS ++ + RD ++E + L++I+ + I +M + LPD L GS
Sbjct: 262 AANSFEAQAARDGLVEASGALRTIAVSLTKIAND-IRWMGSGPLTGLAEIQLPD-LQPGS 319
Query: 126 SIMPQKKNPDILELIRGKTGRVYGN 150
SIMP K NP + E + +V GN
Sbjct: 320 SIMPGKVNPVLPEAVTQVAAQVIGN 344
>pdb|4ADL|A Chain A, Crystal Structures Of Rv1098c In Complex With Malate
pdb|4ADL|B Chain B, Crystal Structures Of Rv1098c In Complex With Malate
pdb|4ADL|C Chain C, Crystal Structures Of Rv1098c In Complex With Malate
pdb|4ADL|D Chain D, Crystal Structures Of Rv1098c In Complex With Malate
pdb|4ADM|A Chain A, Crystal Structure Of Rv1098c In Complex With Meso-Tartrate
pdb|4ADM|B Chain B, Crystal Structure Of Rv1098c In Complex With Meso-Tartrate
pdb|4ADM|C Chain C, Crystal Structure Of Rv1098c In Complex With Meso-Tartrate
pdb|4ADM|D Chain D, Crystal Structure Of Rv1098c In Complex With Meso-Tartrate
Length = 495
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 70 SGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ----FDYVSLPDSLLTGS 125
+ NS ++ + RD ++E + L++I+ + I +M + LPD L GS
Sbjct: 283 AANSFEAQAARDGLVEASGALRTIAVSLTKIAND-IRWMGSGPLTGLAEIQLPD-LQPGS 340
Query: 126 SIMPQKKNPDILELIRGKTGRVYGN 150
SIMP K NP + E + +V GN
Sbjct: 341 SIMPGKVNPVLPEAVTQVAAQVIGN 365
>pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis Bound To Cobalt
pdb|3OCE|B Chain B, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis Bound To Cobalt
pdb|3OCE|C Chain C, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis Bound To Cobalt
pdb|3OCE|D Chain D, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis Bound To Cobalt
Length = 474
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 70 SGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEF-IIFMNPQ--FDYVSLPDSLLTGSS 126
+GN +++ D + F + LS+I+ + ++ P+ + LP ++ GSS
Sbjct: 264 TGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLP-AVQPGSS 322
Query: 127 IMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMC 186
IMP K NP I E + +V GN + +S L N ++ S+ L
Sbjct: 323 IMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLNAFEPLIVYNILSSMRLLGRA 382
Query: 187 LTAF-KLILDNVKFNTGRMYVSAGEGFSIATDI 218
+T + +D ++ N R A E S+AT +
Sbjct: 383 MTNLAERCVDGIEANVERCRAGAEESISLATAL 415
>pdb|4APA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase
(Rv1098c) S318a In Apo Form
pdb|4APA|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Fumarase
(Rv1098c) S318a In Apo Form
pdb|4APA|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Fumarase
(Rv1098c) S318a In Apo Form
pdb|4APA|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Fumarase
(Rv1098c) S318a In Apo Form
Length = 474
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 70 SGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ----FDYVSLPDSLLTGS 125
+ NS ++ + RD ++E + L++I+ + I +M + LPD L G+
Sbjct: 261 AANSFEAQAARDGLVEASGALRTIAVSLTKIAND-IRWMGSGPLTGLAEIQLPD-LQPGA 318
Query: 126 SIMPQKKNPDILELIRGKTGRVYGN 150
SIMP K NP + E + +V GN
Sbjct: 319 SIMPGKVNPVLPEAVTQVAAQVIGN 343
>pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis In Native Form
pdb|3OCF|B Chain B, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis In Native Form
pdb|3OCF|C Chain C, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis In Native Form
pdb|3OCF|D Chain D, Crystal Structure Of Fumarate Lyase:delta Crystallin From
Brucella Melitensis In Native Form
Length = 478
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 70 SGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEF-IIFMNPQ--FDYVSLPDSLLTGSS 126
+GN +++ D + F + LS+I+ + ++ P+ + LP ++ GSS
Sbjct: 281 TGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLP-AVQPGSS 339
Query: 127 IMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMC 186
IMP K NP I E + +V GN + +S L N ++ S+ L
Sbjct: 340 IMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLNAFEPLIVYNILSSMRLLGRA 399
Query: 187 LTAF-KLILDNVKFNTGRMYVSAGEGFSIATDI 218
+T + +D ++ N R A E S+AT +
Sbjct: 400 MTNLAERCVDGIEANVERCRAGAEESISLATAL 432
>pdb|4APB|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (
Rv1098c) S318c In Complex With Fumarate
pdb|4APB|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (
Rv1098c) S318c In Complex With Fumarate
pdb|4APB|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (
Rv1098c) S318c In Complex With Fumarate
pdb|4APB|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (
Rv1098c) S318c In Complex With Fumarate
Length = 474
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 70 SGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ----FDYVSLPDSLLTGS 125
+ NS ++ + RD ++E + L++I+ + I +M + LPD L G
Sbjct: 261 AANSFEAQAARDGLVEASGALRTIAVSLTKIAND-IRWMGSGPLTGLAEIQLPD-LQPGC 318
Query: 126 SIMPQKKNPDILELIRGKTGRVYGN 150
SIMP K NP + E + +V GN
Sbjct: 319 SIMPGKVNPVLPEAVTQVAAQVIGN 343
>pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From
Mycobacterium Abscessus With Malate Bound
pdb|3RRP|B Chain B, Crystal Structure Of Fumarate Hydratase Fum From
Mycobacterium Abscessus With Malate Bound
Length = 471
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 72 NSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ----FDYVSLPDSLLTGSSI 127
+S ++ + RD ++E L++I+ + I +M + LPD L GSSI
Sbjct: 266 DSFEAQAARDGLVEGSGALKTIAASLTKIAND-IRWMGSGPLTGLGEIQLPD-LQPGSSI 323
Query: 128 MPQKKNPDILELIRGKTGRVYGN 150
MP K NP + E + +V GN
Sbjct: 324 MPGKVNPVLPEAVTQVAAQVIGN 346
>pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From
Bacillus Anthracis
pdb|2PFM|B Chain B, Crystal Structure Of Adenylosuccinate Lyase (Purb) From
Bacillus Anthracis
Length = 444
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 124 GSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLV---DSI 180
GSS MP K+NP E + G + G M+T ++ PL + +D+ V D+
Sbjct: 272 GSSAMPHKRNPIGSENMTGLARVIRG---YMMTAYENVPLWHERDISHSSAERVILPDAT 328
Query: 181 ETLNMCLTAFKLIL-------DNVKFNTGRMY 205
LN L F I+ +N+K N R Y
Sbjct: 329 IALNYMLNRFGNIVKNLTVYPENMKRNMTRTY 360
>pdb|3RD8|A Chain A, Crystal Structure Of Fumarate Hydratase Class Ii
Mycobacterium Smegmatis
Length = 489
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 27/203 (13%)
Query: 72 NSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ----FDYVSLPDSLLTGSSI 127
+S ++ + RD ++E + L++I+ + I +M + LPD L GSSI
Sbjct: 282 DSFEAQAARDGLVEASGALRTIAVSLTKIAND-IRWMGSGPLTGLAEIQLPD-LQPGSSI 339
Query: 128 MPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCL 187
MP K NP + E + +V GN + S N + + L++S L+
Sbjct: 340 MPGKVNPVLPEAVTQVACQVVGNDAAIAFGGASGAFELNVYIPMMARNLLESFTLLSNVS 399
Query: 188 TAF-KLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQE 246
F + +D + N R+ A SI T + + +E K+ K + E
Sbjct: 400 RLFAERCIDGLVANEERLRELAESSPSIVTPLNSAIG---------YEEAAKVAKQALAE 450
Query: 247 AKPL-----------DQLSLEEL 258
K + D+LSLEEL
Sbjct: 451 KKTIRQTVIDRGLIGDKLSLEEL 473
>pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp.
Bnc1
Length = 451
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 78 SDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYVSLPDSLLTG-SSIMPQKKNPDI 136
S RD + E + ++ L +++ + I M + V+ P G SS MPQK+NP
Sbjct: 226 SARDAVAETVQFLALVSGSLGKLAMDISIMMTTELGEVAEPFVRHRGASSTMPQKQNPVS 285
Query: 137 LELIRGKTGRVYGNLFNMLTIM 158
ELI V + +ML M
Sbjct: 286 CELILAGARIVRNHATSMLDAM 307
>pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases
Length = 431
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 124 GSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQP---LVDSI 180
GSS MP K+NP E + G + G M+T ++ PL + +D+ L D+
Sbjct: 261 GSSAMPHKRNPIGSENMTGMARVIRG---YMMTAYENVPLWHERDISHSSAERIILPDAT 317
Query: 181 ETLNMCLTAFKLILDNV 197
LN L F I+ N+
Sbjct: 318 IALNYMLNRFSNIVKNL 334
>pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate
Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus
Sp. Adp1
Length = 454
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 78 SDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYVSLPDSL-LTGSSIMPQKKNP 134
+RD I+E S I ++ +++ ++ + M + V P + GSS MP K+NP
Sbjct: 232 GERDRIVEIASVLGIITGNVGKMARDWSLMMQTEIAEVFEPTAKGRGGSSTMPHKRNP 289
>pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
pdb|1J3U|B Chain B, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
pdb|3R6Q|A Chain A, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6Q|B Chain B, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6Q|C Chain C, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6Q|D Chain D, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6Q|E Chain E, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6Q|F Chain F, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6Q|G Chain G, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6Q|H Chain H, A Triclinic-Lattice Structure Of Aspartase From Bacillus
Sp. Ym55-1
pdb|3R6V|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
pdb|3R6V|B Chain B, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
pdb|3R6V|C Chain C, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
pdb|3R6V|D Chain D, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
pdb|3R6V|E Chain E, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
pdb|3R6V|F Chain F, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
pdb|3R6V|G Chain G, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
pdb|3R6V|H Chain H, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1
With Bound L- Aspartate
Length = 468
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 15/140 (10%)
Query: 74 LDSISDRDFIIEFLSHCSITIMHLSRISEEF-IIFMNPQ--FDYVSLPDSLLTGSSIMPQ 130
+D+ + D E S + ++++S+I+ + ++ P+ + LP + GSSIMP
Sbjct: 265 VDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLP-ARQPGSSIMPG 323
Query: 131 KKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLV--DSIETLNMCLT 188
K NP + E++ +V+GN + + ++ N +P++ + I+++++
Sbjct: 324 KVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELN-----VMEPVLFFNLIQSISIMTN 378
Query: 189 AFKLILDN----VKFNTGRM 204
FK +N +K N RM
Sbjct: 379 VFKSFTENCLKGIKANEERM 398
>pdb|3R6Y|A Chain A, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
pdb|3R6Y|B Chain B, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
pdb|3R6Y|C Chain C, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
pdb|3R6Y|D Chain D, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
pdb|3R6Y|E Chain E, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
pdb|3R6Y|F Chain F, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
pdb|3R6Y|G Chain G, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
pdb|3R6Y|H Chain H, Crystal Structure Of Chymotrypsin-Treated Aspartase From
Bacillus Sp. Ym55-1
Length = 401
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 15/140 (10%)
Query: 74 LDSISDRDFIIEFLSHCSITIMHLSRISEEF-IIFMNPQ--FDYVSLPDSLLTGSSIMPQ 130
+D+ + D E S + ++++S+I+ + ++ P+ + LP + GSSIMP
Sbjct: 265 VDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLP-ARQPGSSIMPG 323
Query: 131 KKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLV--DSIETLNMCLT 188
K NP + E++ +V+GN + + ++ N +P++ + I+++++
Sbjct: 324 KVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELN-----VMEPVLFFNLIQSISIMTN 378
Query: 189 AFKLILDN----VKFNTGRM 204
FK +N +K N RM
Sbjct: 379 VFKSFTENCLKGIKANEERM 398
>pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase
pdb|1C3C|B Chain B, T. Maritima Adenylosuccinate Lyase
Length = 429
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 80 RDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYVSLP-DSLLTGSSIMPQKKNPDILE 138
RD +LS +I + RI+ E + V P GSS MP KKNP E
Sbjct: 215 RDRHAFYLSTLAIVAAGIERIAVEIRHLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCE 274
Query: 139 LIRG--KTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLTAFKLI 193
+ G + R Y + +++ L + +D+ + D+ +TL + +
Sbjct: 275 RLTGLSRMMRAYVD-----PSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNV 329
Query: 194 LDNVKFNTGRMY--VSAGEGFSIATDIADYLAKKKIPFRSCHEIVGK-IIKFCVQEAKPL 250
+ N+K N RM + +G + + L +K + + ++IV + +K E L
Sbjct: 330 VRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFL 389
Query: 251 DQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHV 285
+ L LE+ + E++ E+ + ++H DH+
Sbjct: 390 EYL-LEDEEVKKLVTKEELEELFDISYYLKHVDHI 423
>pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase
pdb|1C3U|B Chain B, T. Maritima Adenylosuccinate Lyase
Length = 431
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 80 RDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYVSLP-DSLLTGSSIMPQKKNPDILE 138
RD +LS +I + RI+ E + V P GSS MP KKNP E
Sbjct: 216 RDRHAFYLSTLAIVAAGIERIAVEIRHLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCE 275
Query: 139 LIRG--KTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLTAFKLI 193
+ G + R Y + +++ L + +D+ + D+ +TL + +
Sbjct: 276 RLTGLSRMMRAYVD-----PSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNV 330
Query: 194 LDNVKFNTGRMY--VSAGEGFSIATDIADYLAKKKIPFRSCHEIVGK-IIKFCVQEAKPL 250
+ N+K N RM + +G + + L +K + + ++IV + +K E L
Sbjct: 331 VRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFL 390
Query: 251 DQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHV 285
+ L LE+ + E++ E+ + ++H DH+
Sbjct: 391 EYL-LEDEEVKKLVTKEELEELFDISYYLKHVDHI 424
>pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From
Rickettsia Prowazekii
pdb|3GTD|B Chain B, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From
Rickettsia Prowazekii
Length = 482
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 72 NSLDSISDRDFIIEFLSHCSITIMHLSRISEEF-IIFMNPQ--FDYVSLPDSLLTGSSIM 128
N +S++ D ++EF + + L +I+ + ++ P+ + LP++ GSSIM
Sbjct: 284 NKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLPENE-PGSSIM 342
Query: 129 PQKKNPDILELIRGKTGRVYGN 150
P K NP +E + +V GN
Sbjct: 343 PGKVNPTQVEALTMVCTQVMGN 364
>pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus
Hb8
pdb|1VDK|B Chain B, Crystal Structure Of Fumarase From Thermus Thermophilus
Hb8
Length = 466
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 124 GSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETL 183
GSSIMP K NP +E + RVYGN + N ++SI L
Sbjct: 317 GSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLL 376
Query: 184 NMCLTAFKL-ILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHEIVG----- 237
+ +F + ++ N R I +YL K + + ++ +G
Sbjct: 377 ADAVASFDAHLAQGIEPNLER--------------IEEYLQKNPMLATALNKAIGYDKAA 422
Query: 238 KIIKFCVQEAKPLDQLSLE 256
+I+K ++E K L Q +LE
Sbjct: 423 EIVKKALKEKKTLKQAALE 441
>pdb|1JSW|A Chain A, Native L-Aspartate Ammonia Lyase
pdb|1JSW|B Chain B, Native L-Aspartate Ammonia Lyase
pdb|1JSW|C Chain C, Native L-Aspartate Ammonia Lyase
pdb|1JSW|D Chain D, Native L-Aspartate Ammonia Lyase
Length = 478
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 37/210 (17%)
Query: 83 IIEFLSHCSITIM----------HLSRISEEF-IIFMNPQ--FDYVSLPDSLLTGSSIMP 129
+IE S C +M +S+I + ++ P+ + ++LP+ L GSSIMP
Sbjct: 267 LIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPE-LQAGSSIMP 325
Query: 130 QKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETL-NMCLT 188
K NP + E++ +V GN + ++ L N Q + +S+ L N C
Sbjct: 326 AKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYN 385
Query: 189 AFKLILDNVKFNT----GRMYVSAGEGFSIATDIADYLAKKKIPFRSCH--EIVGKIIKF 242
+ ++ + N G +Y S G I YL PF H +IVGKI
Sbjct: 386 LLEKCINGITANKEVCEGYVYNSIG--------IVTYLN----PFIGHHNGDIVGKI--- 430
Query: 243 CVQEAKPLDQLSLEELKAIHEDIGEDIFEI 272
C + K + ++ LE ++ +DIF +
Sbjct: 431 CAETGKSVREVVLERGLLTEAEL-DDIFSV 459
>pdb|2VKZ|G Chain G, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid
Synthase Type I Multienzyme Complex
pdb|2VKZ|H Chain H, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid
Synthase Type I Multienzyme Complex
pdb|2VKZ|I Chain I, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid
Synthase Type I Multienzyme Complex
pdb|3HMJ|G Chain G, Saccharomyces Cerevisiae Fas Type I
pdb|3HMJ|H Chain H, Saccharomyces Cerevisiae Fas Type I
pdb|3HMJ|I Chain I, Saccharomyces Cerevisiae Fas Type I
pdb|2UV8|G Chain G, Crystal Structure Of Yeast Fatty Acid Synthase With
Stalled Acyl Carrier Protein At 3.1 Angstrom Resolution
pdb|2UV8|H Chain H, Crystal Structure Of Yeast Fatty Acid Synthase With
Stalled Acyl Carrier Protein At 3.1 Angstrom Resolution
pdb|2UV8|I Chain I, Crystal Structure Of Yeast Fatty Acid Synthase With
Stalled Acyl Carrier Protein At 3.1 Angstrom Resolution
Length = 2051
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 167 KDMQECKQPLVDSIETLNMCLTAFKLILDNVKFN---TGRMYVSAGEG-------FSIAT 216
K +QE LV + E + +TA I+ F+ ++ + GEG F
Sbjct: 107 KLLQENDTTLVKTKELIKNYITA--RIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQG 164
Query: 217 DIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVE 276
+ DY + + +++ H +VG +IKF + L + +L+ K + G +I E L
Sbjct: 165 NTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ--GLNILEWLENP 222
Query: 277 KSVEHKDHV 285
+ KD++
Sbjct: 223 SNTPDKDYL 231
>pdb|2PFF|B Chain B, Structural Insights Of Yeast Fatty Acid Synthase
pdb|2PFF|E Chain E, Structural Insights Of Yeast Fatty Acid Synthase
pdb|2PFF|H Chain H, Structural Insights Of Yeast Fatty Acid Synthase
Length = 2006
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 167 KDMQECKQPLVDSIETLNMCLTAFKLILDNVKFN---TGRMYVSAGEG-------FSIAT 216
K +QE LV + E + +TA I+ F+ ++ + GEG F
Sbjct: 107 KLLQENDTTLVKTKELIKNYITA--RIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQG 164
Query: 217 DIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVE 276
+ DY + + +++ H +VG +IKF + L + +L+ K + G +I E L
Sbjct: 165 NTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ--GLNILEWLENP 222
Query: 277 KSVEHKDHV 285
+ KD++
Sbjct: 223 SNTPDKDYL 231
>pdb|3E04|A Chain A, Crystal Structure Of Human Fumarate Hydratase
pdb|3E04|B Chain B, Crystal Structure Of Human Fumarate Hydratase
pdb|3E04|C Chain C, Crystal Structure Of Human Fumarate Hydratase
pdb|3E04|D Chain D, Crystal Structure Of Human Fumarate Hydratase
Length = 490
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 72 NSLDSISDRDFIIEFLSHCSITIMHLSRISEEF-IIFMNPQ--FDYVSLPDSLLTGSSIM 128
N ++++ D ++E + T L +I+ + + P+ + LP++ GSSIM
Sbjct: 290 NKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENE-PGSSIM 348
Query: 129 PQKKNPDILELIRGKTGRVYGN 150
P K NP E + +V GN
Sbjct: 349 PGKVNPTQCEAMTMVAAQVMGN 370
>pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase
Length = 431
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 124 GSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQP---LVDSI 180
GSS MP K+NP E I G + + G + T ++ PL + +D+ L D
Sbjct: 261 GSSAMPHKRNPIGSENITGISRVIRGYI---TTAYENVPLWHERDISHSSAERIMLPDVT 317
Query: 181 ETLNMCLTAFKLILDNV 197
L+ L F I+D +
Sbjct: 318 IALDYALNRFTNIVDRL 334
>pdb|4HL7|A Chain A, Crystal Structure Of Nicotinate Phosphoribosyltransferase
(Target Nysgr-026035) From Vibrio Cholerae
pdb|4HL7|B Chain B, Crystal Structure Of Nicotinate Phosphoribosyltransferase
(Target Nysgr-026035) From Vibrio Cholerae
Length = 446
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 190 FKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKP 249
F L+ ++ GR+ +S G G + D+A++ + +R + +IK + +P
Sbjct: 329 FDQALELCEYFAGRVKISFGIGTFLTNDLANWRNAAGVEYRP----LSIVIKLAECQGRP 384
Query: 250 LDQLSLEELKAIHED 264
+ ++S + KA ED
Sbjct: 385 VAKISDQPEKAXCED 399
>pdb|1EI6|A Chain A, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
pdb|1EI6|B Chain B, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
pdb|1EI6|C Chain C, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
pdb|1EI6|D Chain D, Crystal Structure Of Phosphonoacetate Hydrolase Complexed
With Phosphonoformate
Length = 406
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 120 SLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLV 177
++LTG ++P NP+ L ++ G V+G N ++Q D + + P +
Sbjct: 51 TVLTGDCVVPSFTNPNNLSIVTGAPPSVHGICGNFFFDQETQEEVLMNDAKYLRAPTI 108
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,066,610
Number of Sequences: 62578
Number of extensions: 310988
Number of successful extensions: 843
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 814
Number of HSP's gapped (non-prelim): 45
length of query: 314
length of database: 14,973,337
effective HSP length: 99
effective length of query: 215
effective length of database: 8,778,115
effective search space: 1887294725
effective search space used: 1887294725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)