Query psy15027
Match_columns 314
No_of_seqs 126 out of 1438
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 18:31:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tj7_A Argininosuccinate lyase 100.0 9.5E-59 3.2E-63 458.1 27.4 258 47-304 199-456 (457)
2 2e9f_A Argininosuccinate lyase 100.0 1.1E-58 3.8E-63 458.2 24.8 267 33-306 195-461 (462)
3 1k7w_A Delta 2 crystallin; eye 100.0 2.8E-58 9.6E-63 456.0 23.8 262 47-309 205-466 (468)
4 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 7.7E-49 2.6E-53 387.3 23.1 253 33-302 193-451 (454)
5 2pfm_A Adenylosuccinate lyase; 100.0 3.3E-48 1.1E-52 381.7 26.2 246 33-296 188-439 (444)
6 1c3c_A Protein (adenylosuccina 100.0 1.4E-48 4.8E-53 383.0 22.7 247 33-297 176-428 (429)
7 4eei_A Adenylosuccinate lyase; 100.0 5.3E-49 1.8E-53 386.4 18.9 250 33-303 177-436 (438)
8 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 9.4E-48 3.2E-52 379.2 25.9 253 33-302 189-447 (450)
9 3c8t_A Fumarate lyase; structu 100.0 6.9E-48 2.4E-52 380.2 22.4 250 33-299 187-442 (451)
10 1yis_A Adenylosuccinate lyase; 100.0 3E-44 1E-48 356.6 18.6 255 42-310 198-469 (478)
11 1dof_A Adenylosuccinate lyase; 100.0 2.2E-44 7.4E-49 350.6 16.2 214 33-258 178-398 (403)
12 2j91_A Adenylosuccinate lyase; 100.0 6.7E-43 2.3E-47 348.4 21.5 254 42-310 224-497 (503)
13 3r6q_A Aspartase; aspartate am 100.0 5.8E-42 2E-46 338.5 25.3 217 50-280 233-461 (468)
14 1jsw_A L-aspartase, L-aspartat 100.0 9.2E-42 3.1E-46 338.4 20.7 208 59-280 252-464 (478)
15 4adm_A Fumarase C, fumarate hy 100.0 7.9E-42 2.7E-46 339.0 19.0 212 58-279 269-486 (495)
16 1fur_A Fumarase C, FUMC; hydro 100.0 2.7E-41 9.2E-46 334.1 20.4 214 50-279 233-460 (467)
17 1vdk_A Fumarase C, fumarate hy 100.0 1.6E-41 5.6E-46 335.7 17.9 209 59-281 249-462 (466)
18 2qga_B Adenylosuccinate lyase; 100.0 3E-41 1E-45 333.9 15.7 240 41-298 209-459 (465)
19 2ptr_A Adenylosuccinate lyase; 100.0 5.6E-41 1.9E-45 331.7 17.1 240 34-295 205-454 (462)
20 1yfm_A Fumarase, YFUM; lyase, 100.0 1.4E-40 4.8E-45 330.0 19.0 207 59-279 274-485 (488)
21 3ocf_A Fumarate lyase:delta cr 100.0 6.9E-40 2.4E-44 323.9 19.4 205 58-277 268-477 (478)
22 3e04_A Fumarase, fumarate hydr 100.0 1.7E-39 5.7E-44 321.1 21.6 207 58-278 275-486 (490)
23 3gtd_A Fumarase C, fumarate hy 100.0 3.5E-39 1.2E-43 318.5 21.8 205 58-278 269-480 (482)
24 4hgv_A Fumarase C, fumarate hy 100.0 1.4E-38 4.9E-43 316.0 21.7 211 58-289 280-495 (495)
25 3bhg_A Adenylosuccinate lyase; 100.0 8.2E-39 2.8E-43 316.0 16.9 237 41-296 213-458 (459)
26 2fel_A 3-carboxy-CIS,CIS-mucon 100.0 2E-33 6.8E-38 269.5 11.8 163 32-207 190-355 (359)
27 4ioe_A Secreted protein ESXB; 58.0 34 0.0012 24.5 6.9 69 125-197 1-75 (93)
28 2pk2_A Cyclin-T1, protein TAT; 45.4 4.4 0.00015 37.9 0.0 8 60-68 325-332 (358)
29 1g3p_A G3P, minor coat protein 35.5 7.7 0.00026 32.5 -0.0 10 121-130 203-212 (217)
30 2wuj_A Septum site-determining 30.8 44 0.0015 22.6 3.2 29 284-312 16-44 (57)
31 3gwk_C SAG1039, putative uncha 26.5 1.6E+02 0.0056 20.9 6.2 63 131-197 7-74 (98)
32 3zbh_A ESXA; unknown function, 23.7 1.8E+02 0.0062 20.5 5.9 63 130-196 7-74 (99)
33 3lsg_A Two-component response 20.9 2.2E+02 0.0075 20.3 5.9 22 273-294 81-102 (103)
34 2heo_A Z-DNA binding protein 1 20.8 94 0.0032 21.1 3.5 28 211-241 24-51 (67)
No 1
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=9.5e-59 Score=458.13 Aligned_cols=258 Identities=42% Similarity=0.691 Sum_probs=247.3
Q ss_pred ccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCCCCC
Q psy15027 47 GGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYVSLPDSLLTGSS 126 (314)
Q Consensus 47 A~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~gei~lp~~~~~GSS 126 (314)
|++||++++||+++++.|||+.+..|++||+++||+++|++++++.++++|+|||+|+++|+|+|||||++|+.+.+|||
T Consensus 199 A~aGt~~~~~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~e~g~iel~e~~~~GSS 278 (457)
T 1tj7_A 199 ALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSS 278 (457)
T ss_dssp TTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCBCCT
T ss_pred ccCCCCCCCCHHHHHHHcCCCCCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCCCCC
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred CCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHHhchhcceechhhhHH
Q psy15027 127 IMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFKLILDNVKFNTGRMYV 206 (314)
Q Consensus 127 iMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~~~l~~l~vn~erm~~ 206 (314)
||||||||+.+|+++++|+++.|+...++.+++++|++||||++++|..+++++..+..++..+..|+++|+||+++|++
T Consensus 279 iMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl~~~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~~~m~~ 358 (457)
T 1tj7_A 279 LMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQE 358 (457)
T ss_dssp TCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGGGGHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhhcchhhHHhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHhhhcccCCC
Q psy15027 207 SAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVG 286 (314)
Q Consensus 207 ~l~~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~g 286 (314)
++..+++++|+++++|+++|+|||+||++++++++.|.++|+++.+++.++...+...+++++.+++||+.++++|.++|
T Consensus 359 ~l~~~~~~at~l~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~g 438 (457)
T 1tj7_A 359 AAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKG 438 (457)
T ss_dssp HHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCGGGSCHHHHTTTCTTCCTTHHHHTSHHHHHHTCCSTT
T ss_pred HHhcCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHhhhcHHHHHHhCCHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999988855555566778999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHH
Q psy15027 287 ATAPSQVQHSVDVFENFV 304 (314)
Q Consensus 287 G~a~~~v~~~i~~~~~~l 304 (314)
|++|++|+++|++++..|
T Consensus 439 G~a~~~v~~~i~~~~~~l 456 (457)
T 1tj7_A 439 GVSPQQVAQAIAFAQARL 456 (457)
T ss_dssp CCSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 999999999999988765
No 2
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-58 Score=458.22 Aligned_cols=267 Identities=43% Similarity=0.722 Sum_probs=252.7
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQF 112 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ 112 (314)
..+.||+ |++||++++||+++++.|||+.+..|++||+++||+++|++++++.++++|+|||+|+++|+|+||
T Consensus 195 ~~~lGga-------A~aGt~~~~~~~~~a~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~s~e~ 267 (462)
T 2e9f_A 195 ESPLGAA-------ALAGTGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEVLSALNIGMLHLSRMAEELILYSTEEF 267 (462)
T ss_dssp EECTTCC-------SSSCCSSCCCHHHHHHHTTCSEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred ccCcccc-------ccccCCCCCCHHHHHHHhCCCCCCCCcHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3456665 567778999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHHh
Q psy15027 113 DYVSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFKL 192 (314)
Q Consensus 113 gei~lp~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~~ 192 (314)
|||++|+.+.+|||||||||||+.+|+++++|+++.|+...++.+++++|++||||++++|..+++++..+..++..+..
T Consensus 268 g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~~~~l~~s~~~~~~~l~~~~~ 347 (462)
T 2e9f_A 268 GFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGLPLAYNKDLQEDKEPLLDALATYRDSLRLLAA 347 (462)
T ss_dssp CCEECCGGGCEECSSSSSCEECHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSBCGGGGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhchhhhHhHHHHHHHHHHHHHHHHHH
Confidence 99999988889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhcceechhhhHHhhccchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhc
Q psy15027 193 ILDNVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEI 272 (314)
Q Consensus 193 ~l~~l~vn~erm~~~l~~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ 272 (314)
++++|+||+++|++++..+++++|+++++|+++|+|||+||++++++++.|.++|+++.++..++.+.+...+.+++.++
T Consensus 348 ~l~gl~vn~e~m~~~l~~~~~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~~l~~~l~~~ 427 (462)
T 2e9f_A 348 LLPGLKWRRERMWRAAEGGYTLATELADYLAEKGLPFREAHHVVGRLVRRLVEEGRALKDLTLEELQAHHPLFAEDALPL 427 (462)
T ss_dssp HGGGCEECHHHHHHHHSCSSTTHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHCTTCCGGGGGG
T ss_pred HhCcCEECHHHHHHHHhcCccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHhhhhhHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999988665666666889999
Q ss_pred CChhHhhhcccCCCCCcHHHHHHHHHHHHHHHHH
Q psy15027 273 LSVEKSVEHKDHVGATAPSQVQHSVDVFENFVKD 306 (314)
Q Consensus 273 ldp~~~v~~r~~~gG~a~~~v~~~i~~~~~~l~~ 306 (314)
+||+.++++|.++||++|++|+++|++++..|+.
T Consensus 428 ldp~~~~~~r~~~gG~a~~~v~~~i~~~~~~l~~ 461 (462)
T 2e9f_A 428 LRLETAIHRRRSYGGTAPEAVRERLEEAKKEVGL 461 (462)
T ss_dssp GSHHHHTTSCCSTTSSCHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHhcCcCCCCCCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999887753
No 3
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=100.00 E-value=2.8e-58 Score=455.97 Aligned_cols=262 Identities=37% Similarity=0.627 Sum_probs=250.5
Q ss_pred ccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCCCCC
Q psy15027 47 GGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYVSLPDSLLTGSS 126 (314)
Q Consensus 47 A~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~gei~lp~~~~~GSS 126 (314)
|++||++++||+++++.|||+.+..|++||+.+||+++|++++++.++++|+|||+||++|+|+|||||++|+.+.+|||
T Consensus 205 A~aGt~~~~~~~~la~~LG~~~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~s~e~g~iel~e~~~~GSS 284 (468)
T 1k7w_A 205 ALAGNPLDIDREMLRSELEFASISLNSMDAISERDFVVEFLSFATLLMIHLSKMAEDLIIYSTSEFGFLTLSDAFSTGAS 284 (468)
T ss_dssp TTTCCTTCCCHHHHHHHHTCSEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCEEET
T ss_pred cccCCCCCCChHHHHHHcCCCCCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCCCCC
Confidence 56777889999999999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred CCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHHhchhcceechhhhHH
Q psy15027 127 IMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFKLILDNVKFNTGRMYV 206 (314)
Q Consensus 127 iMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~~~l~~l~vn~erm~~ 206 (314)
||||||||+.+|+++++|+++.|+...++.+++++|++||||++++|..+++++..+..++..+..++++|+||+++|++
T Consensus 285 iMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~e~m~~ 364 (468)
T 1k7w_A 285 LMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQISKENMEK 364 (468)
T ss_dssp TEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGGGHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHhCCCEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHhhhcccCCC
Q psy15027 207 SAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVG 286 (314)
Q Consensus 207 ~l~~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~g 286 (314)
++..+ +++|+++++|+++|+|||+||++++++++.|.++|+++.+++.++...+...+++++.+++||+.++++|.++|
T Consensus 365 ~l~~~-~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~~l~~~~~~~ldp~~~~~~r~~~G 443 (468)
T 1k7w_A 365 ALTPE-MLATDLALYLVRKGVPFRQAHTASGKAVHLAETKGITINKLSLEDLKSISPQFSSDVSQVFNFVNSVEQYTALG 443 (468)
T ss_dssp TCCGG-GGHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTTTCCGGGCCHHHHHHHCTTCCGGGGGGSCHHHHHTTCCSTT
T ss_pred HhhCC-ChHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHhhHHHHHHhCCHHHHHhcCCCCC
Confidence 99988 99999999999999999999999999999999999999999998866666666688999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHH
Q psy15027 287 ATAPSQVQHSVDVFENFVKDMTD 309 (314)
Q Consensus 287 G~a~~~v~~~i~~~~~~l~~~~~ 309 (314)
|++|++|+++|++++..|++..+
T Consensus 444 G~a~~~v~~~i~~~~~~l~~~~~ 466 (468)
T 1k7w_A 444 GTAKSSVTTQIEQLRELMKKQKE 466 (468)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999987654
No 4
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=7.7e-49 Score=387.34 Aligned_cols=253 Identities=18% Similarity=0.164 Sum_probs=215.0
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQF 112 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ 112 (314)
..+.|| .+||..+++. --+++|+++++.|||+.+..| |+.+||+++|++++++.++++|+|||+||++|+++||
T Consensus 193 ~~~lGg--AvGT~~~~~~-~~~~~~~~~a~~LG~~~~~~~---~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~e~ 266 (454)
T 1q5n_A 193 VAQLGG--AVGSLASLQD-QGSIVVEAYAKQLKLGQTACT---WHGERDRIVEIASVLGIITGNVGKMARDWSLMMQTEI 266 (454)
T ss_dssp BCCCCC--TTSSCGGGTT-CHHHHHHHHHHHHTCBCCSSC---CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred ccCCch--HhhcCccccc-ccHHHHHHHHHHhCcCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 456776 5577777655 237889999999999988777 7889999999999999999999999999999999999
Q ss_pred ceeeccCC-CCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhc---chhHHHHHHHHHHHHH
Q psy15027 113 DYVSLPDS-LLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLT 188 (314)
Q Consensus 113 gei~lp~~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~---~~~L~~~~~~~~~~l~ 188 (314)
||+.+|+. .++|||||||||||+.+|+++++|++++|+..+++. ++|++||||++.+ +..+|+++.++..++.
T Consensus 267 gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~ 343 (454)
T 1q5n_A 267 AEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQ---SMVQEHERSLGAWHAEWLSLPEIFQLTAGALE 343 (454)
T ss_dssp CCEECCC-------------CCCHHHHHHHHHHHHHHHHHHHHHH---TTCCCTTSCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhccccccCCCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---hccchhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999986 699999999999999999999999999999999774 5789999999875 5688999999999999
Q ss_pred HHHhchhcceechhhhHHhhc--cchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCH
Q psy15027 189 AFKLILDNVKFNTGRMYVSAG--EGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIG 266 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~ 266 (314)
.+..|+++|+||+++|++++. .+++++|+++.+|+++ +|||+||++|+++++.|.++|+++.+++.++...-..+++
T Consensus 344 ~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~-ig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~ 422 (454)
T 1q5n_A 344 RTLDVLKGMEVNAENMHQNIECTHGLIMAEAVMMALAPH-MGRLNAHHVVEAACKTAVAEQKHLKDIISQVDEVKQYFNP 422 (454)
T ss_dssp HHHHHHHHCEECHHHHHHHHHTTTTGGGHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHTCCHHHHHTTCHHHHTTCCH
T ss_pred HHHHHHCcCEECHHHHHHHHHhCcChhHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHhCCCHHHHHhcchhhhcCCCH
Confidence 999999999999999999995 7888999999999999 9999999999999999999999999998876432234567
Q ss_pred HHHhhcCChhHhhhcccCCCCCcHHHHHHHHHHHHH
Q psy15027 267 EDIFEILSVEKSVEHKDHVGATAPSQVQHSVDVFEN 302 (314)
Q Consensus 267 ~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~~~~~ 302 (314)
+++.+++||+ .|.|+++++|+++++.+|.
T Consensus 423 ~~l~~~ldp~-------~~~g~a~~~v~~~~~~~~~ 451 (454)
T 1q5n_A 423 SQLDEIFKPE-------SYLGNIQDQIDAVLQEAKG 451 (454)
T ss_dssp HHHHHHTCGG-------GGCTTHHHHHHHHHHCC--
T ss_pred HHHHHhCCHH-------HHcCcHHHHHHHHHHHHhh
Confidence 8999999999 6779999999999886654
No 5
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=3.3e-48 Score=381.69 Aligned_cols=246 Identities=19% Similarity=0.182 Sum_probs=220.6
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQF 112 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ 112 (314)
..++||+ +||...+. +.+++++++.|||+.+..| ||+.+||+++|++++++.++++|+|||+||++|+++||
T Consensus 188 ~~~lGgA--vGt~~~~~----~~~~~~~a~~LGl~~~~~~--d~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~e~ 259 (444)
T 2pfm_A 188 VGKLSGA--VGTYANID----PFVEKYVCENLGLEAAPIS--TQTLQRDRHAHYMSTLALIATSIEKMAVEIRGLQKSET 259 (444)
T ss_dssp EECCCCT--TSSCTTSC----HHHHHHHHHHTTCEECSSC--SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred ccCCchh--hccCCcCC----HHHHHHHHHHhCCCCCCCC--cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4567763 77776653 3357899999999987766 78899999999999999999999999999999999999
Q ss_pred ceeeccCC-CCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhc---chhHHHHHHHHHHHHH
Q psy15027 113 DYVSLPDS-LLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLT 188 (314)
Q Consensus 113 gei~lp~~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~---~~~L~~~~~~~~~~l~ 188 (314)
||+.+|+. .++|||||||||||+.+|+++++|+++.|+...++. ++|++||||++.+ +..+++++.++..++.
T Consensus 260 gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~ 336 (444)
T 2pfm_A 260 REVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAYE---NVPLWHERDISHSSAERVILPDATIALNYMLN 336 (444)
T ss_dssp CSEECCCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHH---TSCCCTTCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCcCccCCcccCCHHHHHHHHHHHHHHHHHHHHHH---hCcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999986 699999999999999999999999999999998754 5689999999875 5789999999999999
Q ss_pred HHHhchhcceechhhhHHhhc--cchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCH
Q psy15027 189 AFKLILDNVKFNTGRMYVSAG--EGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIG 266 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~ 266 (314)
.+..|+++|+||+++|++++. .+++++|+++.+|+++|+|||+||++|+++++.|.++|+++.+++.++......+++
T Consensus 337 ~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~ 416 (444)
T 2pfm_A 337 RFGNIVKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWETQVQFKELVEADERITSKLTQ 416 (444)
T ss_dssp HHHHHHHTCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCHHHHHHTCHHHHTTSCH
T ss_pred HHHHHHccCEECHHHHHHHHHhCcCchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCCHHHHHhcchhhhccCCH
Confidence 999999999999999999995 788899999999999999999999999999999999999999998876432234568
Q ss_pred HHHhhcCChhHhhhcccCCCCCcHHHHHHH
Q psy15027 267 EDIFEILSVEKSVEHKDHVGATAPSQVQHS 296 (314)
Q Consensus 267 ~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~ 296 (314)
+++.++|||+ .|.|.++++++++
T Consensus 417 ~~l~~~ldp~-------~~~~~a~~~~~~~ 439 (444)
T 2pfm_A 417 EEINECFNYE-------HHMQHVDTIFERL 439 (444)
T ss_dssp HHHHHHTCGG-------GGGTTHHHHHHHH
T ss_pred HHHHHhCCHH-------HHHhHHHHHHHHH
Confidence 8999999999 7779999998875
No 6
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=1.4e-48 Score=383.01 Aligned_cols=247 Identities=19% Similarity=0.181 Sum_probs=215.7
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQF 112 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ 112 (314)
..+.||+ +||...+. +.+++++++.|||+.+..| ||+.+||+++|++++++.++++|+|||+|+++|+++||
T Consensus 176 ~~~lGgA--vGt~~~~~----~~~~~~~a~~LGl~~~~~~--d~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~~~e~ 247 (429)
T 1c3c_A 176 YGKISGA--VGNYANVP----PEVEEKALSYLGLKPEPVS--TQVVPRDRHAFYLSTLAIVAAGIERIAVEIRHLQRTEV 247 (429)
T ss_dssp EECCCCT--TSSCSSSC----HHHHHHHHHHTTCEECSSC--SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred cCCCchh--hcCCccCC----HHHHHHHHHHcCCCCCCCC--cCccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4567764 77776652 3357899999999987766 78899999999999999999999999999999999999
Q ss_pred ceeeccCC-CCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhc---chhHHHHHHHHHHHHH
Q psy15027 113 DYVSLPDS-LLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLT 188 (314)
Q Consensus 113 gei~lp~~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~---~~~L~~~~~~~~~~l~ 188 (314)
||+.+|+. .++|||||||||||+.+|+++++|+++.|+...++. ++|++||||++.+ +..+++++.++..++.
T Consensus 248 ~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~ 324 (429)
T 1c3c_A 248 LEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSLE---NIALWHERDISHSSVERYVFPDATQTLYYMIV 324 (429)
T ss_dssp CSEECCCCC-----CCCTTCCCCHHHHHHHHHHHHHHHTHHHHHH---TTCCSTTCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhccccccCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh---cCCccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999986 699999999999999999999999999999998754 5689999999875 5688999999999999
Q ss_pred HHHhchhcceechhhhHHhhc--cchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCH
Q psy15027 189 AFKLILDNVKFNTGRMYVSAG--EGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIG 266 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~ 266 (314)
.+..|+++|+||+++|++++. .+++++|+++.+|+++|+|||+||++|+++++.|.++|+++.+++.++...-..+++
T Consensus 325 ~~~~~l~~l~vn~erm~~~l~~s~~~~~a~~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~ 404 (429)
T 1c3c_A 325 TATNVVRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTK 404 (429)
T ss_dssp HHHHHHHHCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCHHHHHHTCHHHHTTCCH
T ss_pred HHHHHHCcCeeCHHHHHHHHHhccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhCChhhhccCCH
Confidence 999999999999999999995 788899999999999999999999999999999999999999998877442244668
Q ss_pred HHHhhcCChhHhhhcccCCCCCcHHHHHHHH
Q psy15027 267 EDIFEILSVEKSVEHKDHVGATAPSQVQHSV 297 (314)
Q Consensus 267 ~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i 297 (314)
+++.+++||+ .|.|.+++.+++++
T Consensus 405 ~~l~~~ldp~-------~~~~~a~~~~~~~~ 428 (429)
T 1c3c_A 405 EELEELFDIS-------YYLKHVDHIFERFE 428 (429)
T ss_dssp HHHHHTTCTH-------HHHTTHHHHHHTTC
T ss_pred HHHHHhCCHH-------HHhhhHHHHHHHHh
Confidence 8999999999 55689998887653
No 7
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=5.3e-49 Score=386.43 Aligned_cols=250 Identities=16% Similarity=0.107 Sum_probs=200.8
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQF 112 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ 112 (314)
.+++||+ +||.+.+. ..+ ++++++.|||+.. .++ +|+.+||+++|++++++.++++|+|||+||++|+++||
T Consensus 177 ~~~lgGA--vGT~~~~~---~~~-~~~~a~~LG~~~~-~~~-~~v~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~~~e~ 248 (438)
T 4eei_A 177 TVQFSGA--VGNYCILT---TED-EKKAADILGLPVE-EVS-TQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHRSDV 248 (438)
T ss_dssp CBCCCCT--TSCCSSSC---HHH-HHHHHHHHTCCBC-SSC-SSSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTT
T ss_pred HhcCccH--hhCccccc---HHH-HHHHHHHcCCCCC-Ccc-ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4566653 67765551 223 4799999999853 343 68999999999999999999999999999999999999
Q ss_pred ceeeccC-CCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhc---chhHHHHHHHHHHHHH
Q psy15027 113 DYVSLPD-SLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLT 188 (314)
Q Consensus 113 gei~lp~-~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~---~~~L~~~~~~~~~~l~ 188 (314)
||+.+|+ +.++|||||||||||+.+|+++++|+++.|+... +++++|++||||++.+ |..+++++..+..++.
T Consensus 249 gel~~~f~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~---~~~~~~~~~erdl~~~~~er~~l~~~~~~~~~~l~ 325 (438)
T 4eei_A 249 FEVYEGFSKGQKGSSTMPHKKNPISTENLTGMARMLRSHVSI---ALENCVLWHERDISHSSAERFYLPDNFGIMVYALR 325 (438)
T ss_dssp CSEECCC------------CCCCHHHHHHHHHHHHHHHHHHH---HHHTTCCCTTCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeccccccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH---HHhccchhcCccchhhHHHHHHHHHHHHHHHHHHH
Confidence 9999996 4699999999999999999999999999998754 5678999999999977 6789999999999999
Q ss_pred HHHhchhcceechhhhHHhhc--cchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCC-
Q psy15027 189 AFKLILDNVKFNTGRMYVSAG--EGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDI- 265 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~- 265 (314)
.+..++++|+||+++|++++. .+++++|+++++|+++|+|||+||++|++++++|.+ |+++.+++.++++.+...+
T Consensus 326 ~~~~~l~~l~vn~erm~~~l~~~~~~~~a~~~a~~Lv~~g~~~~~Ah~~v~~~~~~a~~-g~~l~e~~~~~~~~~~~~~~ 404 (438)
T 4eei_A 326 RMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVAFDLKQ-GESFSKKLQKVMHDEHNIIL 404 (438)
T ss_dssp HHHHHHHHCEECHHHHHHHHHHCCTTHHHHHHHHHHHHSSCCHHHHHHHHHHC--------CCHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHhhhhcccc
Confidence 999999999999999999995 588899999999999999999999999999999999 9999999999877665443
Q ss_pred ---HHHHhhcCChhHhhhcccCCCCCcHHHHHHHHHHHHHH
Q psy15027 266 ---GEDIFEILSVEKSVEHKDHVGATAPSQVQHSVDVFENF 303 (314)
Q Consensus 266 ---~~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~~~~~~ 303 (314)
+.++.+++| .|||++|++|+++++.-++.
T Consensus 405 ~~~~~~~~~~~d---------~~gG~a~~~v~~~l~~~~~~ 436 (438)
T 4eei_A 405 DIPEMDFEGIKK---------TYLKEIDHVFDRSVKARGEN 436 (438)
T ss_dssp CCCCCSHHHHHH---------HHTTTHHHHHHHHCSCC---
T ss_pred CCCHHHHHHHHH---------hcCCchHHHHHHHHHHhhcc
Confidence 677888888 58999999999998765543
No 8
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=9.4e-48 Score=379.21 Aligned_cols=253 Identities=21% Similarity=0.249 Sum_probs=214.0
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQF 112 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ 112 (314)
..+.|| .+||..++... ....++++++.|||+.+..+ |+++||+++|++++++.++++|+|||+||++|+++||
T Consensus 189 ~~~lGG--AvGt~~~~~~~-~~~~~~~la~~LG~~~~~~~---~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~e~ 262 (450)
T 1re5_A 189 VLQFGG--ASGSLAALGSK-AMPVAEALAEQLKLTLPEQP---WHTQRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEA 262 (450)
T ss_dssp BCCCCC--TTSSCGGGGGG-HHHHHHHHHHHHTCBCCSSC---CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred hcCCcc--hhcCCcccCcc-hHHHHHHHHHHhCcCCCCcc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 456775 37777665422 12235899999999987765 8999999999999999999999999999999999999
Q ss_pred ceeeccCC-CCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhh---cchhHHHHHHHHHHHHH
Q psy15027 113 DYVSLPDS-LLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQE---CKQPLVDSIETLNMCLT 188 (314)
Q Consensus 113 gei~lp~~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~---~~~~L~~~~~~~~~~l~ 188 (314)
|||.+|+. .++|||||||||||+.+|+++++|+++.|+...++ .++|.+||||++. .+..+++++..+..++.
T Consensus 263 ~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~---~~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~ 339 (450)
T 1re5_A 263 GEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLLSTLF---AAMPQEHERSLGLWHAEWETLPDICCLVSGALR 339 (450)
T ss_dssp CCEECCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHH---HTCCCCTTBCSSTTTTHHHHHHHHHHHHHHHHH
T ss_pred ceeecccccCCCccccCCCCcCCHHHHHHHHHHHHHHHHHHHHH---HhChhhccccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999985 69999999999999999999999999999999876 4678899999987 46789999999999999
Q ss_pred HHHhchhcceechhhhHHhhc--cchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCH
Q psy15027 189 AFKLILDNVKFNTGRMYVSAG--EGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIG 266 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~ 266 (314)
.+..|+++|+||+++|++++. .+++++|+++.+|++ |+|||+||+++++++++|.++|+++.+++.++...-..+++
T Consensus 340 ~~~~~l~~l~vn~erm~~~l~~s~~~~~Ae~l~~~L~~-gig~~~A~~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~ 418 (450)
T 1re5_A 340 QAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQ-RLGRDRAHHLLEQCCQRAVAEQRHLRAVLGDEPQVSAELSG 418 (450)
T ss_dssp HHHHHHHHCEECHHHHHHHHTTSTTGGGHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHTTCCHHHHHHTCHHHHHHSCH
T ss_pred HHHHHhCcCEECHHHHHHHHHhCcChhHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhccCCCH
Confidence 999999999999999999995 788899999999999 89999999999999999999999999998876432234678
Q ss_pred HHHhhcCChhHhhhcccCCCCCcHHHHHHHHHHHHH
Q psy15027 267 EDIFEILSVEKSVEHKDHVGATAPSQVQHSVDVFEN 302 (314)
Q Consensus 267 ~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~~~~~ 302 (314)
+++.+++||+ .|.|++++.+++++++..+
T Consensus 419 ~~l~~~ldp~-------~~~~~a~~~~~~~~~~~~~ 447 (450)
T 1re5_A 419 EELDRLLDPA-------HYLGQARVWVARAVSEHQR 447 (450)
T ss_dssp HHHHHHTCGG-------GCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHH-------HHhhhHHHHHHHHHhhccc
Confidence 8999999999 8889999999998875443
No 9
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=6.9e-48 Score=380.20 Aligned_cols=250 Identities=18% Similarity=0.144 Sum_probs=211.4
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQF 112 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ 112 (314)
..+.|| .+||..+++.- -+.+++++++.|||+.+..| |+.+||+++|++++++.++++|+|||+||++|+++||
T Consensus 187 ~~~lGg--AvGT~~~~~~~-~~~~~~~~a~~LGl~~~~~~---~~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~~~e~ 260 (451)
T 3c8t_A 187 VVEFSG--ASGTLASLGTR-GLDVQRELARELNLGVPSIT---WHSARDAVAETVQFLALVSGSLGKLAMDISIMMTTEL 260 (451)
T ss_dssp BCCCCC--TTSSCGGGTTC-HHHHHHHHHHHHTCBCCSSC---CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT
T ss_pred ccCCch--hhhcCcccccc-cHHHHHHHHHHhCCCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 456776 56888777553 36789999999999988776 7889999999999999999999999999999999999
Q ss_pred ceeeccCC-CCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhc---chhHHHHHHHHHHHHH
Q psy15027 113 DYVSLPDS-LLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLT 188 (314)
Q Consensus 113 gei~lp~~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~---~~~L~~~~~~~~~~l~ 188 (314)
|||.+|+. .++|||||||||||+.+|+++++|++++|+..+++. ++|++||||++.+ +..|++++.++..++.
T Consensus 261 gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~ 337 (451)
T 3c8t_A 261 GEVAEPFVRHRGASSTMPQKQNPVSCELILAGARIVRNHATSMLD---AMIHDFERATGPWHLEWSAVPEGFAVASGILY 337 (451)
T ss_dssp CCEECC---------------CCHHHHHHHHHHHHHHHHHHHHHH---HTCCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHh---cCchhhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999986 699999999999999999999999999999999775 4788999999875 5688999999999999
Q ss_pred HHHhchhcceechhhhHHhhc--cchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCH
Q psy15027 189 AFKLILDNVKFNTGRMYVSAG--EGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIG 266 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~ 266 (314)
.+..|+++|+||+++|++++. .++++||+++.+|+++ +|||+||++|+++++.|.++|+++.+++.++......+++
T Consensus 338 ~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~-ig~~~A~~iv~~~~~~a~~~g~~l~e~~~~~~~~~~~l~~ 416 (451)
T 3c8t_A 338 QAEFMLGGLQVFPDRMRENLDHSRGLIVAEAVMMALAPH-TGRKEAHDIVYLGCRRAVEDKTGLFEVLRTMPEVAKPLGE 416 (451)
T ss_dssp HHHHHHHSCEECHHHHHHHHTTTTTGGGHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHTTSCHHHHHTTCHHHHHHHCH
T ss_pred HHHHHhCcCEECHHHHHHHHHhccChHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHhCCCHHHHHhcChhhhccCCH
Confidence 999999999999999999995 7888999999999999 9999999999999999999999999998776332133567
Q ss_pred HHHhhcCChhHhhhcccCCCCCcHHHHHHHHHH
Q psy15027 267 EDIFEILSVEKSVEHKDHVGATAPSQVQHSVDV 299 (314)
Q Consensus 267 ~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~~ 299 (314)
+++.+++||+ .|.|+++++++++++.
T Consensus 417 ~~l~~~ldp~-------~~~~~~~~~~~~~~~~ 442 (451)
T 3c8t_A 417 EALRDLTDPR-------NYLGSAGAMVDNVLGG 442 (451)
T ss_dssp HHHHHHTCGG-------GCCTTHHHHHHHHHSC
T ss_pred HHHHHhCCHH-------HHhchHHHHHHHHHHh
Confidence 8999999999 8889999999988754
No 10
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=3e-44 Score=356.59 Aligned_cols=255 Identities=15% Similarity=0.117 Sum_probs=175.9
Q ss_pred cccccccCCCCccccH-------HHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q psy15027 42 SGDENGGGGTTHPIDR-------YRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114 (314)
Q Consensus 42 ~G~~aA~~gt~~~idr-------~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ge 114 (314)
+||.+++.. .||+|| +++++.|||+.+..|+. |+++||+++|++++++.++++|+|||+||++|+| |+|
T Consensus 198 ~GT~a~~~~-~f~~d~~~~~~v~~~~a~~LG~~~~~~~s~-~~~~rd~~~e~~~~l~~~a~~L~kia~Di~ll~s--~~e 273 (478)
T 1yis_A 198 TGTQDSFLT-LFAGDESKVEALDELVTKKANFSNRFLITG-QTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQA--FGE 273 (478)
T ss_dssp TSSCHHHHH-HTTTCHHHHHHHHHHHHHHTTCSCBCSSCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTS
T ss_pred hccchhhhc-ccCcchhhHHHHHHHHHHHhCcCCCCCccc-cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhh
Confidence 466544432 266666 89999999997766765 8999999999999999999999999999999999 999
Q ss_pred eeccCC-CCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcc-hhHHHHHHHHHHHHHHHHh
Q psy15027 115 VSLPDS-LLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECK-QPLVDSIETLNMCLTAFKL 192 (314)
Q Consensus 115 i~lp~~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~-~~L~~~~~~~~~~l~~~~~ 192 (314)
|.+|+. .++|||||||||||+.+|+++++|+++.|+..+++..+++++++++.+.+..+ ..+++++..+..++..+..
T Consensus 274 l~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~er~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 353 (478)
T 1yis_A 274 LLEPFEKDQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIPDVLLTAEALLTTLQN 353 (478)
T ss_dssp EECC-------------CCCCHHHHHHHHHHHHHHTSHHHHHHHHHTCCTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCCCCccccCCcccCCHHHHHHHHHHHHHHHhHHHHHHHhccCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999985 48999999999999999999999999999999888888877655444444444 4789999999999999999
Q ss_pred chhcceechhhhHHhhcc--chhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH----HcCCChhHhhHHHHHhcccCCH
Q psy15027 193 ILDNVKFNTGRMYVSAGE--GFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCV----QEAKPLDQLSLEELKAIHEDIG 266 (314)
Q Consensus 193 ~l~~l~vn~erm~~~l~~--~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~----~~g~~l~e~~~~~~~~~~~~~~ 266 (314)
|+++|+||+++|++++.. +++.++.++++|+++|+|||+||++|++++.++. ++|+++.++.. +.. ..+++
T Consensus 354 ~l~gl~vn~erm~~~l~~~~~~~~te~v~~~l~~~G~~~~~Ah~~v~~~a~~~~~~v~~~g~~~~~l~~-~~~--~~l~~ 430 (478)
T 1yis_A 354 IFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAKQLQATQKVDIRQTMA-DPF--FDSVR 430 (478)
T ss_dssp HHHHCEECHHHHHHHHHHHHHHHHHHHHHHHC---------------------------------CCCT-TTT--STTTH
T ss_pred HHcCCEECHHHHHHHHHhCCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhc-CCC--CCCCH
Confidence 999999999999999976 4544555799999889999999999999987764 57776444432 110 11458
Q ss_pred HHHhhcC-ChhHhhhcccCCCCCcHHHHHHHH-HHHHHHHHHHHHh
Q psy15027 267 EDIFEIL-SVEKSVEHKDHVGATAPSQVQHSV-DVFENFVKDMTDL 310 (314)
Q Consensus 267 ~~l~~~l-dp~~~v~~r~~~gG~a~~~v~~~i-~~~~~~l~~~~~~ 310 (314)
+++.++| ||. .|+|++|++|++++ ..++..|+...+.
T Consensus 431 ~el~~~l~dp~-------~~~g~a~~~v~~~~~~~~~~~l~~~~~~ 469 (478)
T 1yis_A 431 DRVVGLVNNPI-------NFTGRCVSQTESFIAKELKPTIDKYLDK 469 (478)
T ss_dssp HHHHHHHHCGG-------GGSTTHHHHHHHHHHHTHHHHHGGGCC-
T ss_pred HHHHHHHhCHH-------HHcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999 999 78899999999999 4788888765443
No 11
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=2.2e-44 Score=350.61 Aligned_cols=214 Identities=19% Similarity=0.174 Sum_probs=185.2
Q ss_pred ccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy15027 33 EGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSIS-DRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ 111 (314)
Q Consensus 33 ~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~-~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e 111 (314)
..+.|| .+||..++..-+ +++++++++.|||+.+..+ |+. +||+++|++++++.++++|+|||+|+++|+++|
T Consensus 178 ~~~lGg--AvGt~~~~~~~~-~~~~~~~a~~lGl~~~~~~---~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll~~~e 251 (403)
T 1dof_A 178 RAKIGG--AVGTMASWGELG-LEVRRRVAERLGLPHHVIT---TQVAPRESFAVLASALALMAAVFERLAVEIRELSRPE 251 (403)
T ss_dssp CBCCCC--TTSSCGGGGGGH-HHHHHHHHHHTTCCBCSSC---SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred ccCccH--HHhhCccccccc-HHHHHHHHHHhCcCCCCCc---chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 456676 557776664422 7889999999999976654 888 999999999999999999999999999999999
Q ss_pred CceeeccCCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhc---chhHHHHHHHHHHHHH
Q psy15027 112 FDYVSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQEC---KQPLVDSIETLNMCLT 188 (314)
Q Consensus 112 ~gei~lp~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~---~~~L~~~~~~~~~~l~ 188 (314)
||||.+| . +|||||||||||+.+|.++++|+++.|+...++. ++|++||||++.+ |..+|+++..+..++.
T Consensus 252 ~~ei~lp--~-~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~---~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~ 325 (403)
T 1dof_A 252 IGEVVEG--G-GGSSAMPHKANPTASERIVSLARYVRALTHVAFE---NVALWHERDLTNSANERVWIPEALLALDEILT 325 (403)
T ss_dssp TCSEESC--C----------CCCHHHHHHHHHHHHHHHHHHHHHH---TTCCCTTCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred cCeEeCC--C-CccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH---cCcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999 4 9999999999999999999999999999998754 6789999999875 5789999999999999
Q ss_pred HHHhchhcceechhhhHHhhc--cchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCC-ChhHhhHHHH
Q psy15027 189 AFKLILDNVKFNTGRMYVSAG--EGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAK-PLDQLSLEEL 258 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~-~l~e~~~~~~ 258 (314)
.+..|+++|+||+++|++++. .+++++|+++.+|+++|+|||+||++|++++++|.++|+ ++.+++.+++
T Consensus 326 ~~~~~l~gl~vn~erm~~~l~~s~~~~~a~~l~~~L~~~gig~~~A~~iv~~~~~~a~~~g~~~l~e~~~~~~ 398 (403)
T 1dof_A 326 SALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDAL 398 (403)
T ss_dssp HHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHHHHHHH
T ss_pred HHHHHHCcCEECHHHHHHHHHhccCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHh
Confidence 999999999999999999995 788899999999999999999999999999999999998 9999987764
No 12
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=6.7e-43 Score=348.40 Aligned_cols=254 Identities=17% Similarity=0.132 Sum_probs=197.3
Q ss_pred cccccccCCCCccccH-------HHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q psy15027 42 SGDENGGGGTTHPIDR-------YRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114 (314)
Q Consensus 42 ~G~~aA~~gt~~~idr-------~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ge 114 (314)
+||.+++.. .||+|| +++++.|||+.+..|+. |+++||+++|++++++.++++|+|||+||++|+| |+|
T Consensus 224 ~GT~a~~~~-~f~~D~~~~~~v~~~~a~~LGl~~~~~~s~-~~~~rd~~~e~~~~la~la~~L~kia~Dirll~s--~~e 299 (503)
T 2j91_A 224 TGTQASFLQ-LFEGDDHKVEQLDKMVTEKAGFKRAFIITG-QTYTRKVDIEVLSVLASLGASVHKICTDIRLLAN--LKE 299 (503)
T ss_dssp TSSCHHHHH-HTTTCHHHHHHHHHHHHHHTTCSCBCSCCS-SSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTS
T ss_pred ccchhhhcc-ccCCchHHHHHHHHHHHHHhCCCCCCCccc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cce
Confidence 566654432 255666 89999999997666764 8999999999999999999999999999999999 999
Q ss_pred eeccCCC-CCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhh--hcc-hhHHHHHHHHHHHHHHH
Q psy15027 115 VSLPDSL-LTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQ--ECK-QPLVDSIETLNMCLTAF 190 (314)
Q Consensus 115 i~lp~~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~--~~~-~~L~~~~~~~~~~l~~~ 190 (314)
|.+|+.. ++|||||||||||+.+|+++++|+++.|+..+++..+++++ ++||+. ..+ ..+++++..+..++..+
T Consensus 300 i~ep~~~~q~GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~~~--~erd~~~s~~~~~~l~~~~~~~~~~l~~~ 377 (503)
T 2j91_A 300 MEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQW--FERTLDDSANRRICLAEAFLTADTILNTL 377 (503)
T ss_dssp EECCC-----------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHTCC--TTCCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCCCCCCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccCc--ccccccchHHHHhhHHHHHHHHHHHHHHH
Confidence 9999864 89999999999999999999999999999998888887765 555554 333 47899999999999999
Q ss_pred HhchhcceechhhhHHhhcc--chhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH----c--CCChhHhhHHHHHhcc
Q psy15027 191 KLILDNVKFNTGRMYVSAGE--GFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQ----E--AKPLDQLSLEELKAIH 262 (314)
Q Consensus 191 ~~~l~~l~vn~erm~~~l~~--~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~----~--g~~l~e~~~~~~~~~~ 262 (314)
..|+++|+||+++|++++.. +++.++.++++|+++|+||++||++|++.+.++-+ . +.++.+.+..+.. +.
T Consensus 378 ~~~l~gL~vn~erm~~~l~~s~~~~ate~v~~~lv~~G~~~~~Ah~~v~~~a~~~g~~V~~~~~~~~l~e~l~~~~~-~~ 456 (503)
T 2j91_A 378 QNISEGLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASVVKQEGGDNDLIERIQVDAY-FS 456 (503)
T ss_dssp HHHHHSCEECHHHHHHHHHHHHHHHSHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHCGG-GH
T ss_pred HHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHhcCcc-cC
Confidence 99999999999999999975 45555668999998899999999999888876533 2 2345444432211 11
Q ss_pred cCCHHHHhhcCChhHhhhcccCCCCCcHHHHHHHHH-HHHHHHHHHHHh
Q psy15027 263 EDIGEDIFEILSVEKSVEHKDHVGATAPSQVQHSVD-VFENFVKDMTDL 310 (314)
Q Consensus 263 ~~~~~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~-~~~~~l~~~~~~ 310 (314)
+++++|.++|||+ .|+|+++++|+++++ .++..|+...+.
T Consensus 457 -l~~eel~~~ldp~-------~~~g~a~~~v~~~l~~~~~~~l~~~~~~ 497 (503)
T 2j91_A 457 -PIHSQLDHLLDPS-------SFTGRASQQVQRFLEEEVYPLLKPYESV 497 (503)
T ss_dssp -HHHTTHHHHTCGG-------GGSTTHHHHHHHHHHHTHHHHHGGGCC-
T ss_pred -CCHHHHHHhcCHH-------HhCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3467899999999 788999999999996 688888765443
No 13
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=100.00 E-value=5.8e-42 Score=338.49 Aligned_cols=217 Identities=20% Similarity=0.251 Sum_probs=194.8
Q ss_pred CCCccccHHH-------HHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---Cceeecc
Q psy15027 50 GTTHPIDRYR-------TTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ---FDYVSLP 118 (314)
Q Consensus 50 gt~~~idr~~-------la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e---~gei~lp 118 (314)
||++++++++ ++++|||+. +..|+++|+++||+++|++++++.++++|+|||+||++|+|.| ||||.+|
T Consensus 233 GT~~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~Kia~DlrllsS~pr~g~gei~lp 312 (468)
T 3r6q_A 233 GTGLNADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKIANDLRLMASGPRAGLSEIVLP 312 (468)
T ss_dssp SSCTTCCHHHHHHHHHHHHHHHCSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSCCCEECC
T ss_pred CCCCCCChHHHHHHHHHHHHHhCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCeeEEECC
Confidence 4566666544 799999997 5789999999999999999999999999999999999999765 9999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHH-hchhcc
Q psy15027 119 DSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFK-LILDNV 197 (314)
Q Consensus 119 ~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~-~~l~~l 197 (314)
+ .++|||||||||||+.+|.++++|++++|+..+++.++.+.+++.+......+.++++++..+..++..+. .|+++|
T Consensus 313 ~-~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l~~~~~~~i~gl 391 (468)
T 3r6q_A 313 A-RQPGSSIMPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELNVMEPVLFFNLIQSISIMTNVFKSFTENCLKGI 391 (468)
T ss_dssp C-CSCCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGC
T ss_pred C-CCCCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 6 59999999999999999999999999999999999888876655543334456679999999999999999 999999
Q ss_pred eechhhhHHhhccchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhH
Q psy15027 198 KFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEK 277 (314)
Q Consensus 198 ~vn~erm~~~l~~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~ 277 (314)
+||++||++++..++.++|+|+++| +|+.+++++++|.++|+++.|++.++ ..+++++++++|||+.
T Consensus 392 ~vn~erm~~~l~~s~~l~t~La~~l---------gy~~a~~ia~~a~~~g~~l~e~~~~~----~~ls~eel~~~ldp~~ 458 (468)
T 3r6q_A 392 KANEERMKEYVEKSIGIITAINPHV---------GYETAAKLAREAYLTGESIRELCIKY----GVLTEEQLNEILNPYE 458 (468)
T ss_dssp EECHHHHHHHHHTCSTTHHHHHHHH---------HHHHHHHHHHHHHHTCCCSHHHHHHH----TSSCHHHHHHHSCHHH
T ss_pred EECHHHHHHHHHcCCchHHhcchhh---------HHHHHHHHHHHHHHhCCCHHHHHHHc----CCCCHHHHHHHcCHHH
Confidence 9999999999999999999999998 89999999999999999999998765 4678999999999998
Q ss_pred hhh
Q psy15027 278 SVE 280 (314)
Q Consensus 278 ~v~ 280 (314)
++.
T Consensus 459 ~~~ 461 (468)
T 3r6q_A 459 MIH 461 (468)
T ss_dssp HTS
T ss_pred hcC
Confidence 774
No 14
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=9.2e-42 Score=338.44 Aligned_cols=208 Identities=19% Similarity=0.260 Sum_probs=184.2
Q ss_pred HHHHHcCCC-CCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeeccCCCCCCCCCCCCCCCh
Q psy15027 59 RTTELLHFD-SPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP---QFDYVSLPDSLLTGSSIMPQKKNP 134 (314)
Q Consensus 59 ~la~~LGf~-~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~---e~gei~lp~~~~~GSSiMPqKrNP 134 (314)
++++.|||+ .+..|++|++.+||+++|++++|+.++++|+|||+||++|+|+ |||||.+|+ .++|||||||||||
T Consensus 252 ~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~pr~e~gei~lp~-~~~GSSiMP~K~NP 330 (478)
T 1jsw_A 252 KLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPE-LQAGSSIMPAKVNP 330 (478)
T ss_dssp HHHHHHCCCCEECSCSSSBTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTSCCCEECCC-CSCCCSSCCCCCCC
T ss_pred HHHHHcCCCCCcCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECCC-CCCCCCCCCcccCC
Confidence 599999999 5888999999999999999999999999999999999999965 899999998 89999999999999
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHH-hchhcceechhhhHHhhccchh
Q psy15027 135 DILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFK-LILDNVKFNTGRMYVSAGEGFS 213 (314)
Q Consensus 135 ~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~-~~l~~l~vn~erm~~~l~~~~~ 213 (314)
+.+|+++++|+++.|+...++..+++.+++.+...+..+.++++++.++..++..+. .||++|+||+++|++++..++.
T Consensus 331 ~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~p~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~ 410 (478)
T 1jsw_A 331 VVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIG 410 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhccchhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCeecHHHHHHHHHhCch
Confidence 999999999999999999998888864444333234446689999999999999998 6999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHhhh
Q psy15027 214 IATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVE 280 (314)
Q Consensus 214 ~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 280 (314)
++|+++++| +|++++++++.|.++|+++.++..++ ..++++++.++|||+.++.
T Consensus 411 l~t~La~~l---------g~~~a~~~v~~a~~~g~~l~e~~~~~----~~l~~~~~~~~ldp~~~~~ 464 (478)
T 1jsw_A 411 IVTYLNPFI---------GHHNGDIVGKICAETGKSVREVVLER----GLLTEAELDDIFSVQNLMH 464 (478)
T ss_dssp CGGGTHHHH---------CHHHHHHHHHHHHTTCCCHHHHHHHH----TSSCSHHHHTSCCC-----
T ss_pred HHHHHHHhh---------hHHHHHHHHHHHHHhCCCHHHHHHhc----CCCCHHHHHHhCCHHHHhC
Confidence 999999987 79999999999999999999998775 3456889999999996653
No 15
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=100.00 E-value=7.9e-42 Score=339.03 Aligned_cols=212 Identities=20% Similarity=0.177 Sum_probs=178.5
Q ss_pred HHHHHHcCC--CCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCceeeccCCCCCCCCCCCCCC
Q psy15027 58 YRTTELLHF--DSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMN---PQFDYVSLPDSLLTGSSIMPQKK 132 (314)
Q Consensus 58 ~~la~~LGf--~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss---~e~gei~lp~~~~~GSSiMPqKr 132 (314)
++++++||| ..+..|+++|+++||+++|++++|+.++.+|+|||+||++|+| +|||||.+|+ .++|||||||||
T Consensus 269 ~~la~~lG~~~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~e~gei~lp~-~q~GSSiMP~K~ 347 (495)
T 4adm_A 269 AVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPD-LQPGSSIMPGKV 347 (495)
T ss_dssp HHHHHHHCCTTCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSTTSCCCEECCC-C---------CC
T ss_pred HHHHHHhCCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEECCC-CCCCCCCCCCCC
Confidence 469999999 4578899999999999999999999999999999999999998 6899999996 799999999999
Q ss_pred ChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHH-HhchhcceechhhhHHhhccc
Q psy15027 133 NPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAF-KLILDNVKFNTGRMYVSAGEG 211 (314)
Q Consensus 133 NP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~-~~~l~~l~vn~erm~~~l~~~ 211 (314)
||+.+|.|+++|++++|+...++.++++.+++.+........++++++..+..++..+ ..|+++|+||++||++++..+
T Consensus 348 NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~s 427 (495)
T 4adm_A 348 NPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESS 427 (495)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHHhHHHHHHHHHHcChHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhcc
Confidence 9999999999999999999999999888766655433334456899999999999999 699999999999999999999
Q ss_pred hhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHhh
Q psy15027 212 FSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSV 279 (314)
Q Consensus 212 ~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v 279 (314)
+.++|+|++++ +|+.+.+++++|.++|++++|+..++......+++++|+++|||+.++
T Consensus 428 ~~l~t~La~~i---------gy~~a~~ia~~a~~~g~~l~e~~~~~~~~~~~ls~eel~~~ldp~~~~ 486 (495)
T 4adm_A 428 PSIVTPLNSAI---------GYEEAAAVAKQALKERKTIRQTVIDRGLIGDRLSIEDLDRRLDVLAMA 486 (495)
T ss_dssp GGGGGGGHHHH---------CHHHHHHHHHHHHHHTCCHHHHHHHTTCCBTTBCHHHHHHHTCHHHHT
T ss_pred ccHHHHhhhhh---------hHHHHHHHHHHHHHhCCCHHHHHHhCcccccCCCHHHHHHHcCHHHhc
Confidence 99999999887 566666678889999999999988764333447899999999999665
No 16
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=100.00 E-value=2.7e-41 Score=334.12 Aligned_cols=214 Identities=17% Similarity=0.156 Sum_probs=187.0
Q ss_pred CCCccccHH-------HHHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeecc
Q psy15027 50 GTTHPIDRY-------RTTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP---QFDYVSLP 118 (314)
Q Consensus 50 gt~~~idr~-------~la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~---e~gei~lp 118 (314)
||+++++|. .+|+.|||+. +..|++||+.+||+++|++++++.++++|+|||+||++|+|. |||||.+|
T Consensus 233 GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp 312 (467)
T 1fur_A 233 GTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIP 312 (467)
T ss_dssp SSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCSEECC
T ss_pred cCCccCChhHHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCceeEECC
Confidence 455566554 4999999995 788999999999999999999999999999999999999966 59999999
Q ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchh--hhcchhHHHHHHHHHHHHHHH-Hhchh
Q psy15027 119 DSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDM--QECKQPLVDSIETLNMCLTAF-KLILD 195 (314)
Q Consensus 119 ~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl--~~~~~~L~~~~~~~~~~l~~~-~~~l~ 195 (314)
+. ++|||||||||||+.+|.|+++|++++|+..+++.+++.. ++++|. +.....+++++..+..++..+ ..|++
T Consensus 313 ~~-~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g--~~e~~~~~~~~~~~l~~s~~~l~~~l~~~~~~~l~ 389 (467)
T 1fur_A 313 EN-EPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASG--NFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAV 389 (467)
T ss_dssp CC-SCCCTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC--BTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred CC-CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhcC--CccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 85 5999999999999999999999999999999999988763 344553 233347899999999999999 56999
Q ss_pred cceechhhhHHhhccchhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCCh
Q psy15027 196 NVKFNTGRMYVSAGEGFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSV 275 (314)
Q Consensus 196 ~l~vn~erm~~~l~~~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp 275 (314)
+|+||+++|++++..++.++|++++++ +|++++++++.|.++|++++++..++ ..++++++++++||
T Consensus 390 gl~vn~erm~~~l~~~~~l~t~La~~l---------g~~~a~~~~~~a~~~g~~l~e~~~~~----~~l~~~e~~~~ldp 456 (467)
T 1fur_A 390 GIEPNRERINQLLNESLMLVTALNTHI---------GYDKAAEIAKKAHKEGLTLKAAALAL----GYLSEAEFDSWVRP 456 (467)
T ss_dssp GCEECHHHHHHHHHHCSTTHHHHHTTS---------CHHHHHHHHHHHHHHTCCHHHHHHHT----TSSCHHHHHHHCCG
T ss_pred cCeeCHHHHHHHHHhCccHHHHhHhhc---------cHHHHHHHHHHHHHcCCCHHHHHHhc----CCCCHHHHHHhcCH
Confidence 999999999999999999999988765 68888889999999999999988765 34678999999999
Q ss_pred hHhh
Q psy15027 276 EKSV 279 (314)
Q Consensus 276 ~~~v 279 (314)
+.++
T Consensus 457 ~~~~ 460 (467)
T 1fur_A 457 EQMV 460 (467)
T ss_dssp GGC-
T ss_pred HHHh
Confidence 9665
No 17
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=100.00 E-value=1.6e-41 Score=335.69 Aligned_cols=209 Identities=19% Similarity=0.199 Sum_probs=183.4
Q ss_pred HHHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeeccCCCCCCCCCCCCCCCh
Q psy15027 59 RTTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP---QFDYVSLPDSLLTGSSIMPQKKNP 134 (314)
Q Consensus 59 ~la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~---e~gei~lp~~~~~GSSiMPqKrNP 134 (314)
++|+.|||+. +..|++|++.+||+++|++++++.++++|+|||+||++|+|+ |||||.+|+. ++|||||||||||
T Consensus 249 ~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~kia~Dl~ll~S~~r~~~gei~lp~~-~~GSSiMP~K~NP 327 (466)
T 1vdk_A 249 YLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLASGPYAGIGEITIPAN-EPGSSIMPGKVNP 327 (466)
T ss_dssp HHHHHHSSCCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCSEECCCC-SCCSSCCTTCCCC
T ss_pred HHHHHcCCCCCCCcchHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeEECCCC-CCcCCCCCCCCCc
Confidence 5899999995 789999999999999999999999999999999999999965 5999999985 5999999999999
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHH-hchhcceechhhhHHhhccchh
Q psy15027 135 DILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFK-LILDNVKFNTGRMYVSAGEGFS 213 (314)
Q Consensus 135 ~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~-~~l~~l~vn~erm~~~l~~~~~ 213 (314)
+.+|.|+++|++++|+..+++.++++..++.+-+....+..+++++..+..++..+. .|+++|+||+++|++++..++.
T Consensus 328 ~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~ 407 (466)
T 1vdk_A 328 TQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKNPM 407 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCBTTBCSCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCEEcHHHHHHHHHhcch
Confidence 999999999999999999999998763333222223334589999999999999995 6999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHhhhc
Q psy15027 214 IATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEH 281 (314)
Q Consensus 214 ~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~~ 281 (314)
++|+++++| +|++++++++.|.++|++++++..++ ..++++++.++|||+.++..
T Consensus 408 l~t~La~~l---------g~~~a~~~v~~a~~~g~~l~e~~~~~----~~l~~~~~~~~ldp~~~~~~ 462 (466)
T 1vdk_A 408 LATALNKAI---------GYDKAAEIVKKALKEKKTLKQAALEL----GYLTEEEFDRIVVPMRLAKP 462 (466)
T ss_dssp GGHHHHHHH---------CSHHHHTTTTTSCC--CCHHHHHHHT----SSSCHHHHHHHCCHHHHHCC
T ss_pred HHHHHHHhc---------cHHHHHHHHHHHHHcCCCHHHHHHhc----CCCCHHHHHHHcCHHHhcCC
Confidence 999999987 58888888989989999999998766 34668999999999988753
No 18
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=100.00 E-value=3e-41 Score=333.93 Aligned_cols=240 Identities=13% Similarity=0.095 Sum_probs=191.2
Q ss_pred ccccccccC----CCCc-cccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Q psy15027 41 ESGDENGGG----GTTH-PIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDYV 115 (314)
Q Consensus 41 ~~G~~aA~~----gt~~-~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~gei 115 (314)
.+||+++.. +..| .++|+.+++.|||+.+.. .+++.+||+++|++++++.++++|+|||+|+++|+|.++ +.
T Consensus 209 AvGT~~a~~~~~p~~d~~~~~~~~~~~~LGl~~~~~--~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~-~~ 285 (465)
T 2qga_B 209 AVGNFNAHKVASKDTDWVNTIGLFLKKHFNLTYSIY--CTQIQDHDYICELCDGLARANGTLIDLCVDIWLYISNNL-LK 285 (465)
T ss_dssp TTSSCHHHHHHCTTCCHHHHHHHHHHHHHCCEECCC--CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-EE
T ss_pred hhcCccccccccCcccHHHHHHHHHHHHhCCCCCCC--ccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-ee
Confidence 568877443 3333 388867777799987642 268999999999999999999999999999999999887 33
Q ss_pred eccCCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhc--chhHHHHHHHHHHHHHHHHhc
Q psy15027 116 SLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQEC--KQPLVDSIETLNMCLTAFKLI 193 (314)
Q Consensus 116 ~lp~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~--~~~L~~~~~~~~~~l~~~~~~ 193 (314)
..++++++|||||||||||+.+|.++++++.+.+....++..+ .+++||||++++ ++.+++++..+..++..+..+
T Consensus 286 e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~~~~~~~~~~~~~l--~~~~~erdl~~s~~~r~l~~~~~~~~~~l~~~~~~ 363 (465)
T 2qga_B 286 LKVKEKEVGSSTMPHKVNPIDFENAEGNLHIANAFFKLFSSKL--PTSRLQRDLSDSTVLRNIGSSLAYCLIAYKSVLKG 363 (465)
T ss_dssp EC-------CCSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHT--TCCSTTBCTHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhh--cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3334579999999999999999999999999999999887765 478999999987 457999999999999999999
Q ss_pred hhcceechhhhHHhhccchhH-HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCH---HHH
Q psy15027 194 LDNVKFNTGRMYVSAGEGFSI-ATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIG---EDI 269 (314)
Q Consensus 194 l~~l~vn~erm~~~l~~~~~~-at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~---~~l 269 (314)
|++|+||+++|++++..++.+ +++++.+|+++ ++++||++|+++++.+..++.++.++...+ . ..+.+ ++|
T Consensus 364 l~~l~vn~~~m~~~l~~~~~~~ae~v~~~L~~~--G~~~A~~iv~~~~~~~~~~~~~l~~~~~~~-~--~~~~~~~~~~l 438 (465)
T 2qga_B 364 LNKIDIDRRNLEEELNQNWSTLAEPIQIVMKRH--NYVDAYEELKQFTRGKVIDQKIMQEFIKTK-C--AFLPQDVVDQL 438 (465)
T ss_dssp HHHEEECHHHHHHHHHTCGGGGHHHHHHHHHHT--TCSCHHHHHHHHHTTSCCCHHHHHHHHHHH-S--TTSCHHHHHHH
T ss_pred HccCEECHHHHHHHHHcCCChHHHHHHHHHHHh--ChHHHHHHHHHHHhhhhhccCCHHHHHHhc-h--hcCCcchHHHH
Confidence 999999999999999877765 78899999986 558999999999863323333444554433 1 11333 788
Q ss_pred hhcCChhHhhhcccCCCCCcHHHHHHHHH
Q psy15027 270 FEILSVEKSVEHKDHVGATAPSQVQHSVD 298 (314)
Q Consensus 270 ~~~ldp~~~v~~r~~~gG~a~~~v~~~i~ 298 (314)
. +|||. .|.|.++++|+++++
T Consensus 439 ~-~ldp~-------~y~G~a~~~v~~~~~ 459 (465)
T 2qga_B 439 L-ELTPA-------TYTGYADYLAKNVER 459 (465)
T ss_dssp H-HCCGG-------GCCTTHHHHHHTHHH
T ss_pred H-hcCHH-------HhCCcHHHHHHHHHH
Confidence 8 99999 888999999998874
No 19
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=100.00 E-value=5.6e-41 Score=331.73 Aligned_cols=240 Identities=15% Similarity=0.154 Sum_probs=197.3
Q ss_pred cccCCCcccccccc----cCCCCcc-ccHHHHHHHcCCCCCCCCcch-hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15027 34 GKSGGGSESGDENG----GGGTTHP-IDRYRTTELLHFDSPSGNSLD-SISDRDFIIEFLSHCSITIMHLSRISEEFIIF 107 (314)
Q Consensus 34 ~~~~~~~~~G~~aA----~~gt~~~-idr~~la~~LGf~~~~~ns~d-~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ 107 (314)
+++|| .+||+++ +++..|+ ++| .+++.|||. .|+++ ++.+||+++|++++++.++++|+|||+|+++|
T Consensus 205 ~~~~G--AvGT~~~~~~~~~~~~~~~v~~-~~~~~LGl~---~n~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Dl~ll 278 (462)
T 2ptr_A 205 GKING--AVGNYNAHIAAYPEVDWHQFSE-EFVTSLGIQ---WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGY 278 (462)
T ss_dssp ECCCC--TTSSCHHHHHHCTTSCHHHHHH-HHHHHTTCE---ECCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCc--hhcchhhcccccCcccHHHHHH-HHHHHhCCC---CCchhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444 7788773 3344455 887 666679994 67888 58999999999999999999999999999999
Q ss_pred hcCCCceeeccCCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCc-ccccchhhhcch--hHHHHHHHHH
Q psy15027 108 MNPQFDYVSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQP-LAYNKDMQECKQ--PLVDSIETLN 184 (314)
Q Consensus 108 ss~e~gei~lp~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~-~~~~rDl~~~~~--~L~~~~~~~~ 184 (314)
+|.|+ +.+.++++++|||||||||||+.+|.++++++++.|+...++.. +| .+||||++.++. .+++++..+.
T Consensus 279 ~s~~~-~~E~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~---~~~~~~erd~~~~~~~~~l~~~~~~~~ 354 (462)
T 2ptr_A 279 IALNH-FKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASK---LPVSRWQRDLTDSTVLRNLGVGIGYAL 354 (462)
T ss_dssp HHTTS-EEECCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHH---TTCCSTTCCTHHHHHGGGHHHHHHHHH
T ss_pred hCCcc-hhccCCCCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHh---hhhhcccccccccHHHHHHHHHHHHHH
Confidence 99998 55555567999999999999999999999999999999988764 44 689999998764 7999999999
Q ss_pred HHHHHHHhchhcceechhhhHHhhccchhHHHHHHHHHHHc-CCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhccc
Q psy15027 185 MCLTAFKLILDNVKFNTGRMYVSAGEGFSIATDIADYLAKK-KIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHE 263 (314)
Q Consensus 185 ~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~L~~~-Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~ 263 (314)
.++..+..||++|+||+++|++++..++.++|+.+++++.+ |.+ +||++|+++++.+..+|+++.+++.+ .. +.+
T Consensus 355 ~~l~~~~~~l~gl~vn~e~m~~~l~~~~~~~te~~~~~l~~~G~~--~A~~iv~~~~~~~~~~~~~l~e~~~~-~~-~~~ 430 (462)
T 2ptr_A 355 IAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIE--KPYEKLKELTRGKRVDAEGMKQFIDG-LA-LPE 430 (462)
T ss_dssp HHHHHHHHHHHHEEECHHHHHHHHTTCGGGGHHHHHHHHHHTTCS--SHHHHHHHC-----CCHHHHHHHHHT-SS-SCH
T ss_pred HHHHHHHHHHCcCEECHHHHHHHHHcCCchHHHHHHHHHHhhChH--HHHHHHHHHHHHHHHcCCCHHHHHHh-cC-CCc
Confidence 99999999999999999999999999988889999988877 555 99999999999887788888887743 11 111
Q ss_pred CCHHHHhhcCChhHhhhcccCCCCCcHHHHHH
Q psy15027 264 DIGEDIFEILSVEKSVEHKDHVGATAPSQVQH 295 (314)
Q Consensus 264 ~~~~~l~~~ldp~~~v~~r~~~gG~a~~~v~~ 295 (314)
.+++++. ++||. .|.|.+++.+++
T Consensus 431 ~~~~~l~-~ldp~-------~~~~~a~~~~~~ 454 (462)
T 2ptr_A 431 EEKARLK-AMTPA-------NYIGRAITMVDE 454 (462)
T ss_dssp HHHHHHH-TCCGG-------GCCTTHHHHHHH
T ss_pred ccHHHHH-hCCHH-------HHhChHHHHHHH
Confidence 1357898 99999 888999888765
No 20
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=100.00 E-value=1.4e-40 Score=329.97 Aligned_cols=207 Identities=18% Similarity=0.190 Sum_probs=183.1
Q ss_pred HHHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeeccCCCCCCCCCCCCCCCh
Q psy15027 59 RTTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP---QFDYVSLPDSLLTGSSIMPQKKNP 134 (314)
Q Consensus 59 ~la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~---e~gei~lp~~~~~GSSiMPqKrNP 134 (314)
++|+.|||+. +..|++|++.+||+++|++++|+.++++|+|||+||++|+|. |||||.+|+. ++|||||||||||
T Consensus 274 ~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsS~pr~g~gei~lp~~-~~GSSiMP~K~NP 352 (488)
T 1yfm_A 274 QISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPEN-EPGSSIMPGKVNP 352 (488)
T ss_dssp HHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCCC-SCCCTTSTTCCCC
T ss_pred HHHHHhCCCCccCccHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCceeEECCCC-CCcCCCcccccCc
Confidence 5899999995 789999999999999999999999999999999999999966 4999999984 5999999999999
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHH-hchhcceechhhhHHhhccchh
Q psy15027 135 DILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFK-LILDNVKFNTGRMYVSAGEGFS 213 (314)
Q Consensus 135 ~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~-~~l~~l~vn~erm~~~l~~~~~ 213 (314)
+.+|.|+++|++++|+...++.++.+..++.+-+....+..+++++..+..++..+. .|+++|+||+++|++++..++.
T Consensus 353 v~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~~~~~l~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~ 432 (488)
T 1yfm_A 353 TQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLM 432 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBCSCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSG
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHccCch
Confidence 999999999999999999999998864333322223334589999999999999995 6999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHhh
Q psy15027 214 IATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSV 279 (314)
Q Consensus 214 ~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v 279 (314)
++|+++++| +|++++++++.|.++|++++++..++ ..++++++++++||+.++
T Consensus 433 l~t~La~~l---------g~~~a~~i~~~a~~~g~~l~e~~~~~----~~l~~eel~~~ldp~~~~ 485 (488)
T 1yfm_A 433 LVTALNPKI---------GYDAASKVAKNAHKKGITLKESALEL----GVLTEKEFDEWVVPEHML 485 (488)
T ss_dssp GGTTTGGGT---------CHHHHHHHHHHHHHHTCCHHHHHHHT----TSCCHHHHHHHCCGGGCC
T ss_pred HHHHHHHhc---------cHHHHHHHHHHHHHhCCCHHHHHHhc----CCCCHHHHHHhcCHHHhc
Confidence 999888876 58888889999999999999998765 356799999999999544
No 21
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=100.00 E-value=6.9e-40 Score=323.87 Aligned_cols=205 Identities=20% Similarity=0.242 Sum_probs=183.3
Q ss_pred HHHHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeeccCCCCCCCCCCCCCCC
Q psy15027 58 YRTTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP---QFDYVSLPDSLLTGSSIMPQKKN 133 (314)
Q Consensus 58 ~~la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~---e~gei~lp~~~~~GSSiMPqKrN 133 (314)
++++++|||+. +..|+++++++||+++|++++|+.++.+|+|||+||++|+|. |||||.+|+ .++||||||||||
T Consensus 268 ~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~-~q~GSSiMP~K~N 346 (478)
T 3ocf_A 268 VELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIANDLRLLSSGPRSGLGEIRLPA-VQPGSSIMPGKVN 346 (478)
T ss_dssp HHHHHHHTSCCEECSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBSSSSCCCEECCC-CSCCBTTBTTCCC
T ss_pred HHHHHhcCCCCccCCChhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeEEECCC-CCCcCCCCCcccC
Confidence 58899999995 789999999999999999999999999999999999999975 799999995 7999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHH-hchhcceechhhhHHhhccch
Q psy15027 134 PDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFK-LILDNVKFNTGRMYVSAGEGF 212 (314)
Q Consensus 134 P~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~-~~l~~l~vn~erm~~~l~~~~ 212 (314)
|+.+|.++++|++|+|+...++.++.+.+++.+........++++++..+..++..+. .|+++|+||++||++++..++
T Consensus 347 Pv~~E~i~~~a~~V~G~~~~i~~a~~~g~leln~~~p~i~~~l~~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~ 426 (478)
T 3ocf_A 347 PVIPESVNQVCYQVIGNDLTVTMAAESGQLQLNAFEPLIVYNILSSMRLLGRAMTNLAERCVDGIEANVERCRAGAEESI 426 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCG
T ss_pred cHHHHHHHHHHHHHHhHHHHHHHHHhcCcchhcccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCEECHHHHHHHHHhCc
Confidence 9999999999999999999998888776554332222223478999999999999997 589999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhH
Q psy15027 213 SIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEK 277 (314)
Q Consensus 213 ~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~ 277 (314)
.++|+|++++ +|+.+.+++++|.++|++++|+..++ .. ++++|+++|||+.
T Consensus 427 ~lvtaLa~~i---------gy~~a~~ia~~A~~~g~~l~e~~~~~----~~-s~eel~~~ldp~~ 477 (478)
T 3ocf_A 427 SLATALVPVV---------GYARAAEIAKQALASGQTVMEVAISK----GL-DASALTIMLDPLR 477 (478)
T ss_dssp GGGGGGHHHH---------HHHHHHHHHHHHHHHCCCHHHHHHHT----TC-CCHHHHHHTCSCC
T ss_pred cHHHHhhHHH---------HHHHHHHHHHHHHHhCCCHHHHHHHc----CC-CHHHHHHhcCccc
Confidence 9999999998 89999999999999999999998764 23 7899999999974
No 22
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=321.06 Aligned_cols=207 Identities=18% Similarity=0.195 Sum_probs=173.8
Q ss_pred HHHHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCceeeccCCCCCCCCCCCCCCC
Q psy15027 58 YRTTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMN---PQFDYVSLPDSLLTGSSIMPQKKN 133 (314)
Q Consensus 58 ~~la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss---~e~gei~lp~~~~~GSSiMPqKrN 133 (314)
+++++.|||+. +..|++|++++||+++|++++++.++.+|+|||+||++|+| .|||||.+|+ .++||||||||||
T Consensus 275 ~~la~~lGl~~~~~~n~~da~~~rD~~ve~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~-~~~GSSiMP~K~N 353 (490)
T 3e04_A 275 AKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPE-NEPGSSIMPGKVN 353 (490)
T ss_dssp HHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCC-CSCC-----CCCC
T ss_pred HHHHHHhCCCCcCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEECCC-CCCCCCCCCCCCC
Confidence 46999999997 78899999999999999999999999999999999999997 4799999996 6999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHHHHHHH-hchhcceechhhhHHhhccch
Q psy15027 134 PDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMCLTAFK-LILDNVKFNTGRMYVSAGEGF 212 (314)
Q Consensus 134 P~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~l~~~~-~~l~~l~vn~erm~~~l~~~~ 212 (314)
|+.+|.++++|++++|+..++.....+.+++.+-........+++.+..+.+++..+. .|+++|+||++||++++..++
T Consensus 354 Pv~~E~i~~~a~~v~G~~~ai~~a~~~g~~eln~~~p~~~~~ll~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~ 433 (490)
T 3e04_A 354 PTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESL 433 (490)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhch
Confidence 9999999999999999999987766543332221111122457777777777777775 899999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHh
Q psy15027 213 SIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKS 278 (314)
Q Consensus 213 ~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~ 278 (314)
.++|++++++ +|+.+.+++++|.++|++++|++.+. ..+++++++++|||+.+
T Consensus 434 ~lvTaLa~~i---------Gy~~a~~iak~A~~~g~~l~e~~~~~----~~ls~eeld~~ldP~~~ 486 (490)
T 3e04_A 434 MLVTALNPHI---------GYDKAAKIAKTAHKNGSTLKETAIEL----GYLTAEQFDEWVKPKDM 486 (490)
T ss_dssp GGGGGGHHHH---------CHHHHHHHHHHHHHHTCCHHHHHHHH----TSCCHHHHHHHCCGGGS
T ss_pred HHHHHhhhHH---------HHHHHHHHHHHHHHHCCCHHHHHHHc----CCCCHHHHHHHcCHHHh
Confidence 9999999998 89999999999999999999988753 45789999999999943
No 23
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=100.00 E-value=3.5e-39 Score=318.50 Aligned_cols=205 Identities=19% Similarity=0.222 Sum_probs=176.1
Q ss_pred HHHHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeeccCCCCCCCCCCCCCCC
Q psy15027 58 YRTTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP---QFDYVSLPDSLLTGSSIMPQKKN 133 (314)
Q Consensus 58 ~~la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~---e~gei~lp~~~~~GSSiMPqKrN 133 (314)
++++++|||+. +..|++|++++||+++|++++++.++.+|+|||+||++|+|. |||||.+|+ .++||||||||||
T Consensus 269 ~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Kia~DlrllsSgpr~g~gEi~lp~-~~~GSSiMP~K~N 347 (482)
T 3gtd_A 269 QKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLGSGPRCGLGELHLPE-NEPGSSIMPGKVN 347 (482)
T ss_dssp HHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCC-CSCCCSSSTTCCC
T ss_pred HHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCeeEEECCC-CCCCCCCCCCCCC
Confidence 47999999997 678999999999999999999999999999999999999974 799999996 5999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchh--hhcchhHHHHHHHHHHHHHHH-HhchhcceechhhhHHhhcc
Q psy15027 134 PDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDM--QECKQPLVDSIETLNMCLTAF-KLILDNVKFNTGRMYVSAGE 210 (314)
Q Consensus 134 P~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl--~~~~~~L~~~~~~~~~~l~~~-~~~l~~l~vn~erm~~~l~~ 210 (314)
|+.+|.++++|++++|+...++.+..+.+ ++++. ...-.++++.+..+.+++..+ ..|+++|+||++||++++..
T Consensus 348 Pv~~E~i~~~a~~v~G~~~~i~~a~~~g~--~eln~~~pl~~~~~l~s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~ 425 (482)
T 3gtd_A 348 PTQVEALTMVCTQVMGNHVTVTIAGSNGH--LELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDK 425 (482)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCB--TTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEECHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccc--chhcccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhh
Confidence 99999999999999999999887765533 34443 111124566666666666666 48999999999999999999
Q ss_pred chhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHh
Q psy15027 211 GFSIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKS 278 (314)
Q Consensus 211 ~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~ 278 (314)
++.++|+|++++ +|+.+.+++++|.++|++++|++.+. ..+++++|+++|||+.+
T Consensus 426 s~~lvTaLa~~i---------Gy~~a~~ia~~A~~~g~~l~e~~~~~----~~ls~eeld~~ldP~~~ 480 (482)
T 3gtd_A 426 SLMLVTVLNPHI---------GYDNAAKIAKEAHKYGITLKEAAKKL----NFLSEEEFDKIVVPEKM 480 (482)
T ss_dssp CGGGHHHHHHHH---------CHHHHHHHHHHHHHHTCCHHHHHHHT----TSCCHHHHHHHHSCC--
T ss_pred hhHHHHHhhhHH---------HHHHHHHHHHHHHHhCCCHHHHHHHc----CCCCHHHHHHHcCHHHh
Confidence 999999999998 78888999999999999999988653 45789999999999944
No 24
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-38 Score=316.04 Aligned_cols=211 Identities=16% Similarity=0.154 Sum_probs=176.3
Q ss_pred HHHHHHcCCCC-CCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeeccCCCCCCCCCCCCCCC
Q psy15027 58 YRTTELLHFDS-PSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNP---QFDYVSLPDSLLTGSSIMPQKKN 133 (314)
Q Consensus 58 ~~la~~LGf~~-~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~---e~gei~lp~~~~~GSSiMPqKrN 133 (314)
+++++.+||.. +..|+++|+++||++++++++|+.++.+|+|||+||++|+|+ +|+|+.+|. .++||||||||+|
T Consensus 280 ~~la~~~gl~f~~a~n~~~~~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~S~~~~g~~Ei~~p~-~q~GSSiMP~K~N 358 (495)
T 4hgv_A 280 EEIAAITGIGFTSAPNKFEALAAHDSMVFSHGAINATAAALFKIANDIRFLGSGPRSGLGELSLPE-NEPGSSIMPGKVN 358 (495)
T ss_dssp HHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSSCCCEECCC-CSCCC-----CCC
T ss_pred HHHHHHhCCCccccCCHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEEecCc-CCcccccCccccC
Confidence 47888888884 667899999999999999999999999999999999999997 466777764 7999999999999
Q ss_pred hhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcchhHHHHHHHHHHH-HHHHHhchhcceechhhhHHhhccch
Q psy15027 134 PDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQPLVDSIETLNMC-LTAFKLILDNVKFNTGRMYVSAGEGF 212 (314)
Q Consensus 134 P~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~~L~~~~~~~~~~-l~~~~~~l~~l~vn~erm~~~l~~~~ 212 (314)
|+.+|.++++|.++.|+...+..+..+++++++.+.+.....+++.+..+..+ +..+..|+++|+||+++|++++..++
T Consensus 359 Pv~~E~i~~~a~~v~G~~~~i~~a~~~~~~e~n~~~~~~~~~ll~s~~~l~~~~~~~~~~~i~gl~vn~erm~~~l~~s~ 438 (495)
T 4hgv_A 359 PTQCEALTQVCVQVFGNHAALTFAGSQGHFELNVYNPLMAYNFLQSVQLLADAAISFTDNCVVGIEAREDNIKAALDRSL 438 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCEECHHHHHHHHhcCh
Confidence 99999999999999999999999999888888888887776666666655554 45556899999999999999999999
Q ss_pred hHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhhcCChhHhhhcccCCCCCc
Q psy15027 213 SIATDIADYLAKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFEILSVEKSVEHKDHVGATA 289 (314)
Q Consensus 213 ~~at~la~~L~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~gG~a 289 (314)
.++|+|++++ +|+.+.+++++|.++|++++|+..+. ..+++++|+++|||+ .|.|+|
T Consensus 439 ~lvtaL~~~i---------Gy~~A~~iak~A~~~g~~lre~~~~~----~~ls~eeld~lldP~-------~~~gpA 495 (495)
T 4hgv_A 439 MLVTALAPKI---------GYDNAAKIAKTAHKNGTTLREEAVGG----GYVTDEEFDAVVRPE-------TMIGPA 495 (495)
T ss_dssp GGGGGTHHHH---------CHHHHHHHHHHHHHHTCCHHHHHHTT----TSSCHHHHHHHCCGG-------GSSSCC
T ss_pred hHHHHhhHHH---------HHHHHHHHHHHHHHhCCCHHHHHHHc----CCCCHHHHHHhCCHH-------HhcCCC
Confidence 9998888776 56677777788889999998876543 457899999999999 777875
No 25
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=100.00 E-value=8.2e-39 Score=316.04 Aligned_cols=237 Identities=15% Similarity=0.145 Sum_probs=181.4
Q ss_pred cccccccc----CCCCcc-ccHHHHHHHcCCCCCCCCcch-hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Q psy15027 41 ESGDENGG----GGTTHP-IDRYRTTELLHFDSPSGNSLD-SISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQFDY 114 (314)
Q Consensus 41 ~~G~~aA~----~gt~~~-idr~~la~~LGf~~~~~ns~d-~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e~ge 114 (314)
.+||+++. ++..|+ ++| .+++.|||. .|+++ ++.+||+++|++++++.++++|+|||+|+++|+|.|| +
T Consensus 213 AvGT~~a~~~~~~~~~~~~~~~-~~~~~LGl~---~~~~~~~~~~rD~~~e~~~~l~~~a~~L~kia~Di~ll~s~~~-~ 287 (459)
T 3bhg_A 213 AVGNYNAHVAAYPEVDWRKHCA-NFVTSLGLS---FNAYTTQIEPHDGIAEVSQIMVRINNILLDYTQDIWSYISLGY-F 287 (459)
T ss_dssp SSSSCHHHHHHCTTSCHHHHHH-HHHHHTTCE---ECSSCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-E
T ss_pred ccccccccccccCcccHHHHHH-HHHHHhCCC---CCccccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-e
Confidence 66887744 333445 887 666669997 34555 6889999999999999999999999999999999987 3
Q ss_pred eeccCCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcch--hHHHHHHHHHHHHHHHHh
Q psy15027 115 VSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ--PLVDSIETLNMCLTAFKL 192 (314)
Q Consensus 115 i~lp~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~--~L~~~~~~~~~~l~~~~~ 192 (314)
...++++++|||||||||||+.+|.++++++.+.+....++..+ .+++||||+++++. .+++++..+..++..+..
T Consensus 288 ~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~l~~~~~~~~~~~l--~~~~~~rdl~~s~~~r~l~~~~~~~~~~l~~~~~ 365 (459)
T 3bhg_A 288 KQKTIAEEVGSSTMPHKVNPIDFENAEGNLGLSNALFIHFANKL--TQSRMQRDLSDSTVLRNLGVAFSYSLIAYHSVAK 365 (459)
T ss_dssp EECC------CCSSCCCCCTHHHHHHHHHHHHHHHHHHHHHHHT--TCCSTTCCTHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred ehccCCCCCCCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 34445679999999999999999999999999999988876643 25789999998753 689999999999999999
Q ss_pred chhcceechhhhHHhhccchhHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHHHcCCChhHhhHHHHHhcccCCHHHHhh
Q psy15027 193 ILDNVKFNTGRMYVSAGEGFSIATDIADYL-AKKKIPFRSCHEIVGKIIKFCVQEAKPLDQLSLEELKAIHEDIGEDIFE 271 (314)
Q Consensus 193 ~l~~l~vn~erm~~~l~~~~~~at~la~~L-~~~Gi~~r~Ah~~v~~~v~~a~~~g~~l~e~~~~~~~~~~~~~~~~l~~ 271 (314)
+|++|+||+++|++++..++.++++.++.+ +++|.+ +||++|+++++...-++.++.+++.+ +. +.+...++|.
T Consensus 366 ~l~gl~vn~e~m~~~l~~~~~~~te~~~~~L~~~G~~--~A~~iv~~~~~~~~~~~~~l~~~l~~-l~-~~~~~~~~l~- 440 (459)
T 3bhg_A 366 GNDKLQINKSALQKDLSENWEVLAEAIQTVMRRYNEP--NAYEQLKELTRGQMIDAENLKKFIKT-LS-IPEEAKAELM- 440 (459)
T ss_dssp HHTTEEECHHHHHHHHHTCGGGGHHHHHHHHHHTTCT--THHHHHHHHHTTSCCCHHHHHHHHHT-SC-SCHHHHHHHH-
T ss_pred HHCcCEECHHHHHHHHHcCCchHHHHHHHHHHHhChH--HHHHHHHHHHhhcccccccHHHHHHh-cC-CCchhHHHHH-
Confidence 999999999999999998887778888754 454555 99999999997211112234444332 00 0111246787
Q ss_pred cCChhHhhhcccCCCCCcHHHHHHH
Q psy15027 272 ILSVEKSVEHKDHVGATAPSQVQHS 296 (314)
Q Consensus 272 ~ldp~~~v~~r~~~gG~a~~~v~~~ 296 (314)
++||. .|.|.++++++++
T Consensus 441 ~~dp~-------~y~g~a~~~~~~~ 458 (459)
T 3bhg_A 441 KLTPE-------TYTGLATQLVKAF 458 (459)
T ss_dssp HCCGG-------GCCTTHHHHHHHC
T ss_pred hCCHH-------HHhCcHHHHHHhc
Confidence 89999 9999999988763
No 26
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=100.00 E-value=2e-33 Score=269.52 Aligned_cols=163 Identities=15% Similarity=0.081 Sum_probs=130.1
Q ss_pred cccccCCCcccccccccCCCCccccHHHHHHHcCCCCCCCCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy15027 32 SEGKSGGGSESGDENGGGGTTHPIDRYRTTELLHFDSPSGNSLDSISDRDFIIEFLSHCSITIMHLSRISEEFIIFMNPQ 111 (314)
Q Consensus 32 ~~~~~~~~~~~G~~aA~~gt~~~idr~~la~~LGf~~~~~ns~d~~~~RD~~~e~~~~la~la~~L~kiA~Dl~l~ss~e 111 (314)
+..++||+ +||.+++.+. .+++++++++.|||+.+. +|+++||+++|++++++.++++|+|||+|+++|+|+|
T Consensus 190 ~~~~lGga--vGT~~~~~~~-~~~~~~~~a~~LG~~~~~----~~~~~RD~~~e~~~~l~~~a~~L~kia~Dirll~s~e 262 (359)
T 2fel_A 190 FALQFGGA--AGTLEKLGDN-AGAVRADLAKRLGLADRP----QWHNQRDGIAEFANLLSLVTGTLGKFGQDIALMAEIG 262 (359)
T ss_dssp SBCCCCCT--TSSCTTTGGG-HHHHHHHHHHHHTCBCCC----CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhcCCcHH--hccCccCcch-HHHHHHHHHHHhCcCCCc----hHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45677875 7887766543 357789999999999875 4899999999999999999999999999999999999
Q ss_pred CceeeccCCCCCCCCCCCCCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhh---cchhHHHHHHHHHHHHH
Q psy15027 112 FDYVSLPDSLLTGSSIMPQKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQE---CKQPLVDSIETLNMCLT 188 (314)
Q Consensus 112 ~gei~lp~~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~---~~~~L~~~~~~~~~~l~ 188 (314)
||+.+|+ ++|||||||||||+.+|+|+++++++.|++.+++.+ ++.+++||+.. +|..||+++..+..+|.
T Consensus 263 -~Ei~~~~--~~GSS~MP~K~NP~~~E~i~~~a~~v~~~~~~~~~~---~~~~~er~~~~~~~e~~~lp~~~~~~~~~L~ 336 (359)
T 2fel_A 263 -SEIRLSG--GGGSSAMPHKQNPVNAETLVTLARFNAVQISALHQS---LVQEQERSGAGWMLEWLTLPQMVTATGTSLL 336 (359)
T ss_dssp -TTEEEC--------------CCHHHHHHHHHHHHHHHHHHHHHHT---TCCCSSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CeecCCC--CCCCccCCcccCCHHHHHHHHHHHHHHHHHHHHHHH---hhccCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999986 599999999999999999999999999999998764 45689999864 45689999999999999
Q ss_pred HHHhchhcceechhhhHHh
Q psy15027 189 AFKLILDNVKFNTGRMYVS 207 (314)
Q Consensus 189 ~~~~~l~~l~vn~erm~~~ 207 (314)
.+..++++|+||+++|..+
T Consensus 337 ~~~~v~~~l~v~~~~m~~~ 355 (359)
T 2fel_A 337 VAERLAAQIDRLGADESHH 355 (359)
T ss_dssp HHHHHHHHEEEECC-----
T ss_pred HHHHHHccCEECHHHhCcc
Confidence 9999999999999999864
No 27
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=58.02 E-value=34 Score=24.49 Aligned_cols=69 Identities=16% Similarity=0.218 Sum_probs=31.8
Q ss_pred CCCCCC-CCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcch-----hHHHHHHHHHHHHHHHHhchhcc
Q psy15027 125 SSIMPQ-KKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ-----PLVDSIETLNMCLTAFKLILDNV 197 (314)
Q Consensus 125 SSiMPq-KrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~-----~L~~~~~~~~~~l~~~~~~l~~l 197 (314)
|..|++ |.+|..++.+-.........+...+..+.+ .-..++..|. ...+.+......+..+...|..+
T Consensus 1 ~~mm~~i~v~~e~l~~~A~~~~~~~~~i~~~l~~L~~----~~~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~~i 75 (93)
T 4ioe_A 1 SNAMAEIKITPEELERIAGNFKNAAGEAQSQINRLEG----DINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILEGI 75 (93)
T ss_dssp ---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccchhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455665 567766666555555444444444444432 1122333342 34444445555555555444433
No 28
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=45.40 E-value=4.4 Score=37.94 Aligned_cols=8 Identities=25% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHcCCCC
Q psy15027 60 TTELLHFDS 68 (314)
Q Consensus 60 la~~LGf~~ 68 (314)
+.+ ||...
T Consensus 325 ~~~-~~~~~ 332 (358)
T 2pk2_A 325 LRS-LGIDY 332 (358)
T ss_dssp ---------
T ss_pred ccc-cceee
Confidence 444 66543
No 29
>1g3p_A G3P, minor coat protein; filamentous bacteriophage, phage display, selectively infective phages, viral protein; HET: TRO; 1.46A {Enterobacteria phage M13} SCOP: b.37.1.1 b.37.1.1 PDB: 2g3p_A 3dgs_A 3knq_A 1fgp_A
Probab=35.54 E-value=7.7 Score=32.52 Aligned_cols=10 Identities=40% Similarity=0.335 Sum_probs=6.0
Q ss_pred CCCCCCCCCC
Q psy15027 121 LLTGSSIMPQ 130 (314)
Q Consensus 121 ~~~GSSiMPq 130 (314)
+++-||-+||
T Consensus 203 ~~~~~~~~~~ 212 (217)
T 1g3p_A 203 YQGQSSDLPQ 212 (217)
T ss_dssp CCSSEEEECS
T ss_pred eccccCCCCC
Confidence 4555666665
No 30
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=30.79 E-value=44 Score=22.57 Aligned_cols=29 Identities=3% Similarity=-0.117 Sum_probs=22.6
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhh
Q psy15027 284 HVGATAPSQVQHSVDVFENFVKDMTDLLK 312 (314)
Q Consensus 284 ~~gG~a~~~v~~~i~~~~~~l~~~~~~~~ 312 (314)
...|..+.+|+.+++.+...++.+.+...
T Consensus 16 ~~rGY~~~EVD~FLd~v~~~~~~l~~e~~ 44 (57)
T 2wuj_A 16 SFRGYDEDEVNEFLAQVRKDYEIVLRKKT 44 (57)
T ss_dssp ETTEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34599999999999998888776655543
No 31
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=26.46 E-value=1.6e+02 Score=20.93 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=31.9
Q ss_pred CCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcc-----hhHHHHHHHHHHHHHHHHhchhcc
Q psy15027 131 KKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECK-----QPLVDSIETLNMCLTAFKLILDNV 197 (314)
Q Consensus 131 KrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~-----~~L~~~~~~~~~~l~~~~~~l~~l 197 (314)
|.+|..++..-.........+...+..+.+ .-..++..| ....+.+......+..+..+|..+
T Consensus 7 ~V~~e~l~~~A~~~~~~~~~i~~~l~~L~~----~~~~l~~~W~G~a~~aF~~~~~~~~~~~~~~~~~L~~i 74 (98)
T 3gwk_C 7 KLTPEELRSSAQKYTAGSQQVTEVLNLLTQ----EQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDI 74 (98)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHBCSSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666665555555444444444444432 112233334 245555666666666666555443
No 32
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=23.71 E-value=1.8e+02 Score=20.49 Aligned_cols=63 Identities=10% Similarity=0.221 Sum_probs=30.0
Q ss_pred CCCChhHHHHHHHHHhhhhhhHHHHHHHHhcCcccccchhhhcch-----hHHHHHHHHHHHHHHHHhchhc
Q psy15027 130 QKKNPDILELIRGKTGRVYGNLFNMLTIMKSQPLAYNKDMQECKQ-----PLVDSIETLNMCLTAFKLILDN 196 (314)
Q Consensus 130 qKrNP~~~E~ir~~a~~v~g~~~~~l~~~~~~~~~~~rDl~~~~~-----~L~~~~~~~~~~l~~~~~~l~~ 196 (314)
=|.||..++.+-.........+...+..+.+ .-..+...|. ...+.+......+..+..+|..
T Consensus 7 i~v~~~~l~~~A~~~~~~~~~i~~~l~~L~~----~v~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~~ 74 (99)
T 3zbh_A 7 IRLTPEELRGVARQYNVESSNVTELIARLDQ----MSHTLQGIWEGASSEAFIQQYQELRPSFEKMAVLLNE 74 (99)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777666666555555555555544432 1122333342 3444444455555555544433
No 33
>3lsg_A Two-component response regulator YESN; structural genomics, PSI-2, protein structure initiative, MCSG; 2.05A {Fusobacterium nucleatum}
Probab=20.93 E-value=2.2e+02 Score=20.35 Aligned_cols=22 Identities=14% Similarity=0.063 Sum_probs=15.0
Q ss_pred CChhHhhhcccCCCCCcHHHHH
Q psy15027 273 LSVEKSVEHKDHVGATAPSQVQ 294 (314)
Q Consensus 273 ldp~~~v~~r~~~gG~a~~~v~ 294 (314)
-|+..|.+..+.+-|.+|.+.+
T Consensus 81 ~~~s~F~r~Fk~~~G~tP~~yR 102 (103)
T 3lsg_A 81 EDVNYFITKFKKYYQITPKQYR 102 (103)
T ss_dssp SCHHHHHHHHHHHHSSCHHHHT
T ss_pred CCHHHHHHHHHHHHCcCHHHHh
Confidence 3777777776677777776643
No 34
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=20.79 E-value=94 Score=21.11 Aligned_cols=28 Identities=11% Similarity=0.248 Sum_probs=22.3
Q ss_pred chhHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q psy15027 211 GFSIATDIADYLAKKKIPFRSCHEIVGKIIK 241 (314)
Q Consensus 211 ~~~~at~la~~L~~~Gi~~r~Ah~~v~~~v~ 241 (314)
..+..++++..| |+++...|+++..+..
T Consensus 24 ~~~s~~eLA~~l---glsr~tv~~~l~~L~~ 51 (67)
T 2heo_A 24 GPVAIFQLVKKC---QVPKKTLNQVLYRLKK 51 (67)
T ss_dssp SCEEHHHHHHHH---CSCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHH---CcCHHHHHHHHHHHHH
Confidence 345677888888 9999999999888764
Done!