RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1503
(265 letters)
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 154 bits (391), Expect = 2e-46
Identities = 75/189 (39%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
Query: 69 LLGEHEPRKINSVHSNGKGHVSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGA 128
LL + + + HS+ + +VS ++ + L +++ + ++ I G+ G+
Sbjct: 19 LLEKVQQSNGDRKHSSDENNVSFSHLCL-----VGNPVLKNINLNIEKGEMLAITGSTGS 73
Query: 129 GKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLRRRYADVIR 188
GKTSLL +IL EL S G + G VS+ SQ WI TI++NI+FG+ Y RY V++
Sbjct: 74 GKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGTIKENIIFGVSYDEYRYKSVVK 133
Query: 189 VCALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHV 248
C LQ D D TV+GE G +LSGGQ+ARI+LARAVYK+AD+YLLD P +D+
Sbjct: 134 ACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFT 193
Query: 249 GKHLFEDCI 257
+ +FE C+
Sbjct: 194 EEQVFESCV 202
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 148 bits (374), Expect = 3e-44
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 15/183 (8%)
Query: 86 KGHVSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISS 145
+G + +D+V+ Q++ N L ++++ + + +G G GK++L+++I ++S
Sbjct: 14 QGRIDIDHVSFQYN-DNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 72
Query: 146 GKVSLGGT-------------VSYASQEPWIFAATIRQNILFGLP-YLRRRYADVIRVCA 191
G++ + G + Q+ +F+ T+++NIL G P + ++
Sbjct: 73 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMAN 132
Query: 192 LQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGKH 251
D +LP G T VGERG LSGGQK R+++AR N I +LD+ SA+D+
Sbjct: 133 AHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESI 192
Query: 252 LFE 254
+ E
Sbjct: 193 IQE 195
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 134 bits (339), Expect = 5e-39
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 86 KGHVSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISS 145
G + NVT + L +++ + ++G G+GK+++ +I I
Sbjct: 11 TGDLEFRNVTFTYP-GREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDE 69
Query: 146 GKVSLGGT-------------VSYASQEPWIFAATIRQNILFGLP--YLRRRYADVIRVC 190
G + + G V+ SQ +F T+ NI + Y R + + R+
Sbjct: 70 GHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMA 129
Query: 191 ALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGK 250
D + + NG T++GE G LSGGQ+ RI +ARA+ +++ I +LD+ SA+D +
Sbjct: 130 YAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESER 189
Query: 251 HLFE 254
+
Sbjct: 190 AIQA 193
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 132 bits (333), Expect = 3e-38
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 86 KGHVSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISS 145
+G V +V+ + + L L ++ T +P ++ ++G G+GK+++ ++ N + +
Sbjct: 9 EGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTG 68
Query: 146 GKVSLGGT-------------VSYASQEPWIFAATIRQNILFGLP--YLRRRYADVIRVC 190
G++ L G V+ QEP +F ++++NI +GL
Sbjct: 69 GQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKS 128
Query: 191 ALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGK 250
LP G T V E G+ LSGGQ+ + LARA+ + + +LDD SA+D +
Sbjct: 129 GAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQL 188
Query: 251 HLFE 254
+ +
Sbjct: 189 QVEQ 192
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 119 bits (299), Expect = 3e-33
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 89 VSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKV 148
++ N+ ++ ++ + L+ ++++ K ++ I+G G+GK++L +I +G+V
Sbjct: 2 ITFRNIRFRYK-PDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQV 60
Query: 149 SLGGT-------------VSYASQEPWIFAATIRQNILFGLPYLR-RRYADVIRVCALQD 194
+ G V Q+ + +I NI P + + ++ D
Sbjct: 61 LIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHD 120
Query: 195 DFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGKHLFE 254
L G T+VGE+GA LSGGQ+ RI +ARA+ N I + D+ SA+D +
Sbjct: 121 FISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMR 180
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 117 bits (295), Expect = 1e-32
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 89 VSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKV 148
+S +V + +++ L +S +P + G G GK+++ ++ + ++G++
Sbjct: 2 LSARHVDFAY--DDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEI 59
Query: 149 SLGGT-------------VSYASQEPWIFAATIRQNILFGLP--YLRRRYADVIRVCALQ 193
++ G + + SQ+ I A TIR+N+ +GL Y V+ + +
Sbjct: 60 TIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFAR 119
Query: 194 DDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGKHLF 253
+++P+ T VGERG +SGGQ+ R+ +ARA +N I +LD+ +++D +
Sbjct: 120 SFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQ 179
Query: 254 EDC 256
+
Sbjct: 180 KAL 182
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 86.8 bits (215), Expect = 5e-21
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 89 VSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKV 148
V L+N+T ++ A +N +++T K + ++G G GKT+ L +I + G++
Sbjct: 7 VKLENLTKRFGNFTA---VNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI 63
Query: 149 SLGGT-----------VSYASQEPWIFAA-TIRQNILFGLPY-------LRRRYADVIRV 189
G +S Q ++ T+ +NI F L + +R +
Sbjct: 64 YFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAEL 123
Query: 190 CALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVG 249
+++ + P A LSGGQ+ R+ +ARA+ D+ L+D+PLS +D +
Sbjct: 124 LQIEELLNRYP-----------AQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLR 172
Query: 250 KHLFE 254
+
Sbjct: 173 VAMRA 177
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 84.5 bits (209), Expect = 2e-20
Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 19/185 (10%)
Query: 89 VSLDNVTAQWSLQNADLT-LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGK 147
+ L NVT + + + L V++ K + I+G G+GK+++L+II + + G+
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGE 61
Query: 148 VSLGGT-----------------VSYASQEPWIFA-ATIRQNILFGLPYLRRRYADVIRV 189
V + + + Q+ + T +N+ L + R
Sbjct: 62 VYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEER 121
Query: 190 CALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVG 249
+ + + + LSGGQ+ R+ +ARA+ N I L D P A+D G
Sbjct: 122 RKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTG 181
Query: 250 KHLFE 254
+ + +
Sbjct: 182 EKIMQ 186
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 78.8 bits (194), Expect = 4e-18
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 89 VSLDNVTAQWSLQNADLT-LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGK 147
+ L N+T + + LN VS+ Q+ +IGA GAGK++L+ + R + G
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 148 VSLGGT----------------VSYASQEPWIFA-ATIRQNILFGLPY-------LRRRY 183
V + G + Q + + T+ N+ L ++RR
Sbjct: 62 VLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRV 121
Query: 184 ADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSA 243
+++ + L D DS P+ +LSGGQK R+ +ARA+ N + L D+ SA
Sbjct: 122 TELLSLVGLGDKHDSYPS-----------NLSGGQKQRVAIARALASNPKVLLCDEATSA 170
Query: 244 VDMHVGKHLFEDC 256
+D + + E
Sbjct: 171 LDPATTRSILELL 183
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 73.0 bits (179), Expect = 2e-16
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 14/156 (8%)
Query: 107 LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGT--------VSYAS 158
L +++T + + G G GKT+LL I L+ G++ G + +
Sbjct: 17 LERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLP 76
Query: 159 QEPWIFAATIRQNILFGLPYLRRRYADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQ 218
+E + ++ L + L + + + + L + LS G
Sbjct: 77 EEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLDLKK------KLGELSQGT 130
Query: 219 KARINLARAVYKNADIYLLDDPLSAVDMHVGKHLFE 254
R+ LA + NA+IY+LDDP+ A+D + +
Sbjct: 131 IRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLK 166
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 73.1 bits (179), Expect = 6e-16
Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 34/177 (19%)
Query: 107 LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGT------------- 153
L+ VSI+ + IIG G+GK++L+++I L+ G+V
Sbjct: 20 LDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHY 79
Query: 154 -VSYASQEPWIFAA-TIRQNILFGLP--------------YLRRRYADVIRVCALQDDFD 197
+ Q P T+ +N+L G ++ + V + + +
Sbjct: 80 GIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLK 139
Query: 198 SLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGKHLFE 254
D + LSGGQ + + RA+ N + ++D+P++ V + +F
Sbjct: 140 LSHLYD-----RKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFN 191
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 72.3 bits (177), Expect = 8e-16
Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 33/187 (17%)
Query: 89 VSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKV 148
V L NVT W +++ + +G G GK++LL +I I+SG +
Sbjct: 1 VQLQNVTKAWGEVVV---SKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL 57
Query: 149 SLGGT-----------VSYASQEPWIFAA-TIRQNILFGLPYL-------RRRYADVIRV 189
+G V Q ++ ++ +N+ FGL +R V V
Sbjct: 58 FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV 117
Query: 190 CALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVG 249
L D P +LSGGQ+ R+ + R + ++LLD+PLS +D +
Sbjct: 118 LQLAHLLDRKP-----------KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALR 166
Query: 250 KHLFEDC 256
+ +
Sbjct: 167 VQMRIEI 173
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 72.3 bits (177), Expect = 9e-16
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 19/154 (12%)
Query: 107 LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTV------------ 154
+ + + Q+ +IGA GAGKT+ L I +R GK+ G
Sbjct: 22 IKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRM 81
Query: 155 --SYASQEPWIFA-ATIRQNILFGLPYLRRRYADVIRVCALQDDFDSLPNGDFTVVGERG 211
+ + IF T+ +N++ G + + + + F L + + G
Sbjct: 82 GIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKE----RLKQLG 137
Query: 212 ASLSGGQKARINLARAVYKNADIYLLDDPLSAVD 245
+LSGG++ + + RA+ + ++D+P +
Sbjct: 138 GTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLA 171
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 71.9 bits (176), Expect = 1e-15
Identities = 36/183 (19%), Positives = 78/183 (42%), Gaps = 20/183 (10%)
Query: 87 GHVSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSG 146
G V + ++ + + L +S + ++ +IG GAGKT+ L II ++ SSG
Sbjct: 1 GAVVVKDLRKRIGKKEI---LKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSG 57
Query: 147 KVSLGGT------------VSYASQEPWIFA-ATIRQNILFGLPYLRRRYADVIRVCALQ 193
V++ G +SY +E + + + F + +++ +
Sbjct: 58 IVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERA 117
Query: 194 DDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGKHLF 253
+ L + +R ++ S G ++ +ARA+ N + +LD+P S +D+ + +
Sbjct: 118 TEIAGLGE----KIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVR 173
Query: 254 EDC 256
+
Sbjct: 174 KIL 176
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 70.3 bits (172), Expect = 4e-15
Identities = 38/193 (19%), Positives = 75/193 (38%), Gaps = 39/193 (20%)
Query: 89 VSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKV 148
V L +V + A + +S+ K + ++G G GKT+ L +I S G++
Sbjct: 4 VRLVDVWKVFGEVTA---VREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 149 SLGGT-----------------VSYASQEPWIFAATIRQNI------LFGLPY--LRRRY 183
+G ++ Q ++ + L +P + +R
Sbjct: 61 YIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 120
Query: 184 ADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSA 243
+V + L + + P LSGGQ+ R+ L RA+ + ++L+D+PLS
Sbjct: 121 REVAELLGLTELLNRKP-----------RELSGGQRQRVALGRAIVRKPQVFLMDEPLSN 169
Query: 244 VDMHVGKHLFEDC 256
+D + + +
Sbjct: 170 LDAKLRVRMRAEL 182
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 68.3 bits (167), Expect = 3e-14
Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 47/186 (25%)
Query: 107 LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGT------------- 153
L VS+ + + IIG+ G+GK++ L I + S G + + G
Sbjct: 18 LKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLK 77
Query: 154 -------------VSYASQEPWIFA-ATIRQNILFGLPYL--------RRRYADVIRVCA 191
++ Q +++ T+ +N++ + R R +
Sbjct: 78 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVG 137
Query: 192 LQDDF-DSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGK 250
+ + P LSGGQ+ R+++ARA+ D+ L D+P SA+D +
Sbjct: 138 IDERAQGKYP-----------VHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVG 186
Query: 251 HLFEDC 256
+
Sbjct: 187 EVLRIM 192
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 66.6 bits (162), Expect = 8e-14
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 31/184 (16%)
Query: 89 VSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKV 148
+ +++++ +W + +L+ +S+ + + I+G GAGKT L +I SG++
Sbjct: 2 IEIESLSRKWK----NFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRI 57
Query: 149 SLGGT-----------VSYASQEPWIFAA-TIRQNILFGLPYL----RRRYADVIRVCAL 192
L G +++ Q +F +++N+ FG+ +R D R +
Sbjct: 58 LLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKI 117
Query: 193 QDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGKHL 252
+ D P +LSGG++ R+ LARA+ N I LLD+PLSA+D ++
Sbjct: 118 EHLLDRNPL-----------TLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENA 166
Query: 253 FEDC 256
E
Sbjct: 167 REML 170
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 66.6 bits (162), Expect = 9e-14
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 104 DLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGT---------- 153
+ LN V + ++G GAGK+ L +I ++ G+V L G
Sbjct: 13 NFRLN-VDFE-MGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERR 70
Query: 154 -VSYASQEPWIFAA-TIRQNILFGLPYLRRRYADVIRVCALQDDFDSLPNGDFTVVGERG 211
+ + Q+ +F ++ +NI +GL + R D RV + + G ++ +
Sbjct: 71 GIGFVPQDYALFPHLSVYRNIAYGLRNVERVERD-RRVREMAEKL-----GIAHLLDRKP 124
Query: 212 ASLSGGQKARINLARAVYKNADIYLLDDPLSAVDMHVGKHLFEDC 256
A LSGG++ R+ LARA+ + LLD+PLSAVD+ L E+
Sbjct: 125 ARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEEL 169
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 64.2 bits (156), Expect = 7e-13
Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 35/171 (20%)
Query: 107 LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGT------------- 153
L +S + ++ ++G GAGK++LL + + G + G
Sbjct: 15 LGPLSGEVRAGEILHLVGPNGAGKSTLLARMAG-MTSGKGSIQFAGQPLEAWSATKLALH 73
Query: 154 VSYASQEPWI-FAATIRQNILFGLPYLRR--RYADVIRVCALQDDFDSLPNGDFTVVGER 210
+Y SQ+ FA + + R DV AL D +G
Sbjct: 74 RAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGALALDD-----------KLGRS 122
Query: 211 GASLSGGQKARINLARAVYKNA-------DIYLLDDPLSAVDMHVGKHLFE 254
LSGG+ R+ LA V + + LLD+P++++D+ L +
Sbjct: 123 TNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDK 173
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 59.3 bits (143), Expect = 3e-11
Identities = 42/193 (21%), Positives = 76/193 (39%), Gaps = 38/193 (19%)
Query: 89 VSLDNVTAQWSLQNADLT-LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGK 147
+ + NV+ + + L+ V+I + + I+G GAGKT+ + II S+G+
Sbjct: 4 IIVKNVSK--VFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGE 61
Query: 148 VSLGGT----------------VSYASQEPWIFAA-TIRQNILFGL-------PYLRRRY 183
+ + Q ++ T +NI F L +R+R
Sbjct: 62 LYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRV 121
Query: 184 ADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPLSA 243
+V ++ + + P LSG Q+ R+ LARA+ K+ + LLD+P S
Sbjct: 122 EEVAKILDIHHVLNHFPR-----------ELSGAQQQRVALARALVKDPSLLLLDEPFSN 170
Query: 244 VDMHVGKHLFEDC 256
+D +
Sbjct: 171 LDARMRDSARALV 183
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 47.3 bits (111), Expect = 3e-07
Identities = 16/126 (12%), Positives = 30/126 (23%), Gaps = 15/126 (11%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLRR 181
I G G GKT+L+ I+ L + +++ F R
Sbjct: 5 ITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGF---------------RI 49
Query: 182 RYADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLDDPL 241
+ + F S V + A + ++D+
Sbjct: 50 ITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIG 109
Query: 242 SAVDMH 247
Sbjct: 110 KMELFS 115
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 35.9 bits (81), Expect = 0.004
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 110 VSITFKPKQLACIIGAIGAGKTSLLHIILNEL 141
+ FK + IIG G+GK+SLL IL L
Sbjct: 17 TVVEFKEG-INLIIGQNGSGKSSLLDAILVGL 47
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 33.2 bits (74), Expect = 0.019
Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 2/133 (1%)
Query: 66 NFLLLGEHEPRKINSVHSNGKGHVSLDNVTAQWSLQNADLTLNAVSITFKPKQLACIIGA 125
+ L ++ P + V N + L N A W + +A + A + G
Sbjct: 1 DKLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGP 60
Query: 126 IGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWI--FAATIRQNILFGLPYLRRRY 183
G GKT+ H++ EL + + S + + F +
Sbjct: 61 PGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNL 120
Query: 184 ADVIRVCALQDDF 196
V + +
Sbjct: 121 NGKHFVIIMDEVD 133
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 31.0 bits (69), Expect = 0.072
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILF 174
++G +GKT+L+ + +V GTV + ++
Sbjct: 6 VVGYKHSGKTTLMEKWVAAAVREGWRV---GTVKHHGHGGEPARPEGVDSVRH 55
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 31.2 bits (69), Expect = 0.080
Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILF 174
++G +GKT+ ++ I+SG+ + + I + +
Sbjct: 6 TLVGLQYSGKTTFVN------VIASGQFNEDMIPTVGFNMRKITKGNVTIKLWD 53
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 31.6 bits (70), Expect = 0.091
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 108 NAVSITFKPKQLACIIGAIGAGKTSLL 134
+ F IIG G+GK++++
Sbjct: 16 GVTKVGFGESNFTSIIGPNGSGKSNMM 42
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 31.7 bits (70), Expect = 0.092
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 110 VSITFKPKQLACIIGAIGAGKTSLLHII 137
+ FK + IIG G+GK+SLL I
Sbjct: 17 TVVEFKEG-INLIIGQNGSGKSSLLDAI 43
Score = 29.0 bits (63), Expect = 0.55
Identities = 7/45 (15%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 216 GGQKARIN------LARAVYKNADIYLLDDPLSAVDMHVGKHLFE 254
GG++ + ++ + + +LD+P +D + L
Sbjct: 281 GGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLIT 325
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 31.1 bits (70), Expect = 0.12
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 12/68 (17%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLR 180
+ GA G GKT+ L+ I+ ++ L EP + + G +
Sbjct: 9 YLDGAYGIGKTTAAEEFLHHFAITPNRILL-------IGEPLSYWRNL-----AGEDAIC 56
Query: 181 RRYADVIR 188
Y R
Sbjct: 57 GIYGTQTR 64
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 30.8 bits (68), Expect = 0.12
Identities = 9/55 (16%), Positives = 15/55 (27%), Gaps = 2/55 (3%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEP--WIFAATIRQNIL 173
I G I GK++ + ++ T A N+L
Sbjct: 6 SIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLL 60
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 30.4 bits (67), Expect = 0.15
Identities = 21/138 (15%), Positives = 38/138 (27%), Gaps = 19/138 (13%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKV-------------SLGGTVSYASQEPWIFAATI 168
+ G G GKT+L+H L+ S V +G V S +
Sbjct: 6 LTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVG 65
Query: 169 RQNILFGLPYLRRRY------ADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQKARI 222
+ +Y + + + L++ S G V + + + I
Sbjct: 66 LEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFI 125
Query: 223 NLARAVYKNADIYLLDDP 240
R +L
Sbjct: 126 QAVRQTLSTPGTIILGTI 143
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 30.7 bits (69), Expect = 0.15
Identities = 10/86 (11%), Positives = 21/86 (24%), Gaps = 14/86 (16%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLR 180
I G G GKT+ +++ EP + + + +
Sbjct: 8 YIDGPHGMGKTTTTQLLVAL---------GSRDDIVYVPEPMTYWRVLGAS-----ETIA 53
Query: 181 RRYADVIRVCALQDDFDSLPNGDFTV 206
Y R+ + +
Sbjct: 54 NIYTTQHRLDQGEISAGDAAVVMTSA 79
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 30.4 bits (67), Expect = 0.19
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQ 170
+ G G+GKT L H + +++ + L G+V + E IR+
Sbjct: 41 VFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIRE 89
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.5 bits (67), Expect = 0.20
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 117 KQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQN 171
+ ++G GK+S++ I +NEL + + L F +++
Sbjct: 29 APITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQKE 83
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.7 bits (65), Expect = 0.25
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQE--PWIFAATIRQNILFGLPY 178
+G AGKT+LLH++ N+ R+++ + + T + + L
Sbjct: 4 LFLGLDNAGKTTLLHMLKND-RLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWK 62
Query: 179 LRRRYADVIRVCALQDD 195
+ I D
Sbjct: 63 DYFPEVNGIVFLVDAAD 79
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 30.0 bits (66), Expect = 0.27
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 121 CIIGAIGAGKTSLLHIILNELR 142
+G G+GKT+L L
Sbjct: 4 VFVGTAGSGKTTLTGEFGRYLE 25
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 29.6 bits (65), Expect = 0.29
Identities = 12/77 (15%), Positives = 19/77 (24%), Gaps = 1/77 (1%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLR 180
I G I AGK++ ++I+ F G L+
Sbjct: 6 SIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGG-NVLQ 64
Query: 181 RRYADVIRVCALQDDFD 197
Y R +
Sbjct: 65 MMYEKPERWSFTFQTYA 81
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase
{Lactobacillus casei [TaxId: 1582]}
Length = 296
Score = 29.7 bits (65), Expect = 0.33
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 49 LTSFIFFGGRLSTDRVLNFLLLGEHEPRKINSVH---SNGKGHVS 90
+ SF R+L L + ++ +H +NGKG +
Sbjct: 10 IHSFPRLAKTGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAA 54
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 29.3 bits (64), Expect = 0.34
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 121 CIIGAIGAGKTSLLHIIL 138
I G I GKT+L ++
Sbjct: 9 GIFGHIDHGKTTLSKVLT 26
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 29.5 bits (65), Expect = 0.36
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISS--GKVSLGGTVSYASQEPWIFAATIR 169
++G G+GKT+L +L + G+V G T + + E + T+R
Sbjct: 6 ALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVR 56
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 28.8 bits (63), Expect = 0.41
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 121 CIIGAIGAGKTSLLHIILNELR 142
G GKT+LL ++ L
Sbjct: 6 AFAAWSGTGKTTLLKKLIPALC 27
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 29.3 bits (65), Expect = 0.43
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISS--GKVSLGGTVS 155
I I AGKT+ IL G+V G
Sbjct: 10 GIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATM 46
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 28.9 bits (63), Expect = 0.43
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVS-LGGTVSYASQEPWIFAATIRQNILFGLPYL 179
++G AGKT++L + + V + T+ + + + + G L
Sbjct: 6 LMLGLDNAGKTTILK------KFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSL 59
Query: 180 RRRYADVIRVC 190
R + +
Sbjct: 60 RSYWRNYFEST 70
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 29.2 bits (64), Expect = 0.44
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 108 NAVSITFKPKQLACIIGAIGAGKTSLLHII 137
I F + + I+G G+GK++++ I
Sbjct: 16 RPSLIGFSDR-VTAIVGPNGSGKSNIIDAI 44
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 29.2 bits (64), Expect = 0.47
Identities = 20/92 (21%), Positives = 28/92 (30%), Gaps = 5/92 (5%)
Query: 114 FKPKQLACIIGAIGAGKTSL-LHIILN---ELRISSGKVSLGGTVSYASQEPWIFAATIR 169
+ ++ GAGK+ L L + + G V Y E A R
Sbjct: 26 MVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHR 85
Query: 170 QNILFGLPYLRRRYADVIRVCALQDDFDSLPN 201
+ L G V +Q SLPN
Sbjct: 86 LHAL-GAHLSAEERQAVADGLLIQPLIGSLPN 116
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 28.9 bits (63), Expect = 0.48
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G GAGKT++L+ +
Sbjct: 9 LILGLDGAGKTTILYRLQVG 28
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 29.0 bits (64), Expect = 0.51
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 118 QLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEP 161
L + GAGK+SL+ +L + +VS VS+ +++P
Sbjct: 3 TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVS----VSHTTRQP 42
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 28.4 bits (62), Expect = 0.62
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I G +GKTSLL ++ +
Sbjct: 7 IIAGPQNSGKTSLLTLLTTD 26
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.5 bits (62), Expect = 0.64
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
+G AGKT+LLH++ ++
Sbjct: 17 VFLGLDNAGKTTLLHMLKDD 36
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 27.9 bits (61), Expect = 0.76
Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQE------PWIFAATIRQNILF 174
IIG +G GK+ LLH + ++ ++G E T Q
Sbjct: 8 IIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFR 67
Query: 175 GLPYLRRRYADVIRVCALQDDFDSLPN 201
+ R A + + +
Sbjct: 68 AVTRSYYRGAAGALMVYDITRRSTYNH 94
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 28.1 bits (61), Expect = 0.78
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGT 153
I G IG+GKT+ L+
Sbjct: 13 LIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEK 45
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 28.5 bits (62), Expect = 0.79
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVS 155
++G + GKT+L L+ +R S+ G ++
Sbjct: 9 SVLGHVDHGKTTL----LDHIRGSAVASREAGGIT 39
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 28.1 bits (61), Expect = 0.80
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 117 KQLACIIGAIGAGKTSLLHIILNELRIS 144
K+L I G G GK++ + +L S
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLAAQLDNS 29
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 28.2 bits (61), Expect = 0.83
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G GK++LL+ +L
Sbjct: 9 AIVGKPNVGKSTLLNNLLGV 28
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 28.1 bits (61), Expect = 0.84
Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Query: 115 KPKQLACI-IGAIGAGKTSLLH 135
P+ + C+ +G GKT LL
Sbjct: 2 SPQAIKCVVVGDGAVGKTCLLI 23
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 28.4 bits (63), Expect = 0.89
Identities = 4/22 (18%), Positives = 10/22 (45%)
Query: 121 CIIGAIGAGKTSLLHIILNELR 142
+ G G GK++ ++ +
Sbjct: 10 YLDGVYGIGKSTTGRVMASAAS 31
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 27.7 bits (60), Expect = 0.90
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
++G AGKT++L+ +
Sbjct: 4 LMVGLDAAGKTTILYKLKLG 23
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 28.0 bits (61), Expect = 0.93
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 122 IIGAIGAGKTSLLHIILNEL 141
+ G GAGK++LL + E
Sbjct: 5 LSGPSGAGKSTLLKKLFQEH 24
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 27.8 bits (60), Expect = 0.94
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
++GA G GK++L I
Sbjct: 5 LLLGAPGVGKSALARIFGGV 24
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 28.1 bits (61), Expect = 0.95
Identities = 17/148 (11%), Positives = 36/148 (24%), Gaps = 17/148 (11%)
Query: 106 TLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFA 165
A + + + G GAGK++ + + T F
Sbjct: 14 GFFARTFDLDEL-VTTLSGGNGAGKSTTMAAFV--------------TALIPDLTLLHFR 58
Query: 166 ATIRQNILFGLPYLRRRYADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQKARINLA 225
T G VC D + VV G+ ++++
Sbjct: 59 NTTEAGATSGSRDKGLHGKLKAGVCYSMLDTI--NSRHQRVVVGVRLQQVAGRDRKVDIK 116
Query: 226 RAVYKNADIYLLDDPLSAVDMHVGKHLF 253
+ + + L ++ +
Sbjct: 117 PFAIQGLPMSVQPTQLVTETLNERQARV 144
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 28.4 bits (62), Expect = 0.95
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 110 VSITFKPKQLACIIGAIGAGKTSLL 134
V I F I+GA G+GK+++
Sbjct: 20 VVIPFSKG-FTAIVGANGSGKSNIG 43
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 27.8 bits (60), Expect = 0.98
Identities = 10/82 (12%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 100 LQNADLTLNAVSITFKPKQLA---CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSY 156
+ +++ ++AV P+ + G GK+S ++ ++N ++ G T +
Sbjct: 3 VTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTL 62
Query: 157 ASQEPWIFAATIRQNILFGLPY 178
+
Sbjct: 63 NFYIINDELHFVDVPGYGFAKV 84
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 27.7 bits (60), Expect = 1.1
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
+G +GKT L +L
Sbjct: 4 LFVGLCDSGKTLLFVRLLTG 23
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 28.2 bits (62), Expect = 1.1
Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 121 CIIGAIGAGKTSLLHIILNEL-RISSGKVSLGGTVSYASQE 160
+I + GK++L ++ IS+ K E
Sbjct: 21 SVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDE 61
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 28.0 bits (61), Expect = 1.2
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKV 148
+ GA G GK+ LL + + ++
Sbjct: 55 VNGATGTGKSVLLRELAYTGLLRGDRM 81
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 27.6 bits (60), Expect = 1.2
Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSL--GGTVSYASQEPWIFAATIRQNILFGLPYL 179
+ G G G T+ + ++ LR + G+V + + + R + P
Sbjct: 6 VTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKE-ENLVSDRDQMRKMDPET 64
Query: 180 RRRYADVIRVCALQDDFD 197
++R + + +
Sbjct: 65 QKRIQKMAGRKIAEMAKE 82
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.7 bits (60), Expect = 1.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G G GKTSL++ +N+
Sbjct: 6 IILGDSGVGKTSLMNQYVNK 25
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 1.3
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G AGKT++L+
Sbjct: 19 IIVGLDNAGKTTILYQFSMN 38
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 27.6 bits (60), Expect = 1.3
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 122 IIGAIGAGKTSLLHIILNEL 141
I G G GK++LL + E
Sbjct: 6 ISGPSGTGKSTLLKKLFAEY 25
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 27.4 bits (59), Expect = 1.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 121 CIIGAIGAGKTSLLH 135
I+G GK+SL
Sbjct: 8 AILGYRSVGKSSLTI 22
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 27.3 bits (59), Expect = 1.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G GK++L + ILN+
Sbjct: 12 AIVGRPNVGKSTLFNAILNK 31
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 27.8 bits (60), Expect = 1.4
Identities = 9/39 (23%), Positives = 13/39 (33%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQE 160
+ G GK+ L H + +I G Y E
Sbjct: 39 LFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTE 77
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 27.3 bits (59), Expect = 1.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
++G +GK+SL+H L
Sbjct: 9 GVLGDARSGKSSLIHRFLTG 28
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 27.4 bits (59), Expect = 1.5
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G GK++L + ++ +
Sbjct: 4 LIVGRPNVGKSTLFNKLVKK 23
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 27.7 bits (61), Expect = 1.6
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 10/61 (16%)
Query: 121 CII--GAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQ--------EPWIFAATIRQ 170
++ G GAGKT ++ L +G+ G+ Q E + A T R
Sbjct: 127 SLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRN 186
Query: 171 N 171
N
Sbjct: 187 N 187
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 27.8 bits (61), Expect = 1.6
Identities = 15/58 (25%), Positives = 17/58 (29%), Gaps = 7/58 (12%)
Query: 121 CII--GAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQ-----EPWIFAATIRQN 171
II G GAGKT + SG S E A T R +
Sbjct: 96 SIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRND 153
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 27.0 bits (58), Expect = 1.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G GK++LL+ +L +
Sbjct: 9 AIVGRPNVGKSTLLNKLLGQ 28
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.0 bits (58), Expect = 1.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G G GKTSL+H +N+
Sbjct: 6 IILGDSGVGKTSLMHRYVND 25
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 27.0 bits (58), Expect = 1.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I G AGK+SLL+ +
Sbjct: 5 VIAGRPNAGKSSLLNALAGR 24
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 27.2 bits (59), Expect = 1.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
++G AGKT+LL + +E
Sbjct: 20 LLLGLDNAGKTTLLKQLASE 39
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 27.3 bits (59), Expect = 1.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSL 150
I G GAGK +L+ + R + V+
Sbjct: 5 IEGVDGAGKRTLVEKLSGAFRAAGRSVAT 33
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 27.3 bits (59), Expect = 1.8
Identities = 3/24 (12%), Positives = 12/24 (50%)
Query: 118 QLACIIGAIGAGKTSLLHIILNEL 141
++ + G GK++++ + +
Sbjct: 3 RVVVLSGPSAVGKSTVVRCLRERI 26
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.9 bits (58), Expect = 1.8
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
++G G GK++L
Sbjct: 10 VVVGGGGVGKSALTI 24
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 26.9 bits (59), Expect = 1.8
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSG 146
IG + GKT+L I L G
Sbjct: 7 GTIGHVDHGKTTLTAAITKILAEGGG 32
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 27.0 bits (58), Expect = 1.9
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
+IG G GK++L +I
Sbjct: 7 VLIGEQGVGKSTLANIFAGV 26
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 26.8 bits (58), Expect = 1.9
Identities = 10/85 (11%), Positives = 23/85 (27%), Gaps = 5/85 (5%)
Query: 122 IIGAIGAGKTSLLHIILN-----ELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGL 176
++G+ G GK++L + + + V + T Q +
Sbjct: 9 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAI 68
Query: 177 PYLRRRYADVIRVCALQDDFDSLPN 201
R + + +S
Sbjct: 69 RDNYFRSGEGFLCVFSITEMESFAA 93
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 27.1 bits (59), Expect = 1.9
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Query: 113 TFKPKQLACIIGAIGAGKTSLLHIILNE 140
T K IIG G GK+SLL ++
Sbjct: 7 TLK----ILIIGESGVGKSSLLLRFTDD 30
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 26.9 bits (58), Expect = 2.0
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
I G G GK++L+
Sbjct: 6 AIFGRAGVGKSALVV 20
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 26.9 bits (58), Expect = 2.0
Identities = 7/23 (30%), Positives = 12/23 (52%), Gaps = 4/23 (17%)
Query: 113 TFKPKQLACIIGAIGAGKTSLLH 135
T+K ++G G GK++L
Sbjct: 4 TYK----LVVVGDGGVGKSALTI 22
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 27.2 bits (59), Expect = 2.0
Identities = 9/56 (16%), Positives = 17/56 (30%)
Query: 115 KPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQ 170
+ + G G+GKTSL I E + + + + +
Sbjct: 30 ESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKD 85
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 26.8 bits (58), Expect = 2.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 122 IIGAIGAGKTSLLHIILNELR 142
+ G +GAGKT+LL ILNE
Sbjct: 8 LTGFLGAGKTTLLRHILNEQH 28
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 26.9 bits (58), Expect = 2.3
Identities = 17/86 (19%), Positives = 22/86 (25%), Gaps = 5/86 (5%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYAS-----QEPWIFAATIRQNILFG 175
++G GKT LL S ++ + T Q
Sbjct: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDR 66
Query: 176 LPYLRRRYADVIRVCALQDDFDSLPN 201
L L DV VC S N
Sbjct: 67 LRPLSYPQTDVFLVCFSVVSPSSFEN 92
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide
synthetase MurE {Escherichia coli [TaxId: 562]}
Length = 234
Score = 27.1 bits (58), Expect = 2.3
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 122 IIGAIG-AGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLR 180
++G G GKT+ ++ ++ ++ GTV I + + L
Sbjct: 7 LVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTGSAVDVQHELA 66
Query: 181 RRYADVIRVCALQDD 195
CA++
Sbjct: 67 GLVDQGATFCAMEVS 81
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.0 bits (58), Expect = 2.3
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 121 CIIGAIGAGKTSLLHIILNEL 141
I+G +GK+ L++ +
Sbjct: 11 AILGGESSGKSVLVNKLAAVF 31
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.5 bits (57), Expect = 2.3
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 121 CIIGAIGAGKTSLLH 135
C++G G GK+S++
Sbjct: 8 CLLGDTGVGKSSIMW 22
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 26.8 bits (58), Expect = 2.4
Identities = 12/87 (13%), Positives = 25/87 (28%), Gaps = 9/87 (10%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSY---ASQEPWIFAATIRQNILFGLP 177
++GA +GK++++ ++ + G V + Q
Sbjct: 6 LLLGAGESGKSTIVK------QMKIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSERKKW 59
Query: 178 YLRRRYADVIRVCALQDDFDSLPNGDF 204
I C D+D + D
Sbjct: 60 IHCFEGVTAIIFCVALSDYDLVLAEDE 86
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.6 bits (57), Expect = 2.5
Identities = 9/80 (11%), Positives = 22/80 (27%), Gaps = 3/80 (3%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFG---LP 177
++G GK+S++ ++ + + ++G G
Sbjct: 7 VLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFA 66
Query: 178 YLRRRYADVIRVCALQDDFD 197
L Y + + D
Sbjct: 67 SLAPMYYRNAQAALVVYDVT 86
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 26.6 bits (57), Expect = 2.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 122 IIGAIGAGKTSLLHIILNELR 142
I G +GKT+L + + LR
Sbjct: 27 IDGLSRSGKTTLANQLSQTLR 47
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 26.6 bits (57), Expect = 2.5
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
G GK++L++ + +
Sbjct: 4 IFAGRSNVGKSTLIYRLTGK 23
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.4 bits (57), Expect = 2.5
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 121 CIIGAIGAGKTSLLH 135
++G+ G GK++L
Sbjct: 7 VVLGSGGVGKSALTV 21
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 26.5 bits (57), Expect = 2.5
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 121 CIIGAIGAGKTSLLH 135
I+G GKT LL
Sbjct: 6 VIVGDGACGKTCLLI 20
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.7 bits (58), Expect = 2.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
+IG G GK+ LL ++
Sbjct: 10 LLIGNSGVGKSCLLLRFSDD 29
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.5 bits (57), Expect = 2.6
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 121 CIIGAIGAGKTSLLH 135
+IG GKT L +
Sbjct: 6 IVIGDSNVGKTCLTY 20
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.5 bits (57), Expect = 2.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 121 CIIGAIGAGKTSLLH 135
++G GKT+LLH
Sbjct: 6 VVVGDSQCGKTALLH 20
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 26.4 bits (57), Expect = 2.7
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
+IG G GK++LL
Sbjct: 8 VLIGDSGVGKSNLLSRFTRN 27
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 26.6 bits (57), Expect = 2.7
Identities = 4/19 (21%), Positives = 9/19 (47%)
Query: 121 CIIGAIGAGKTSLLHIILN 139
++G GK+S++
Sbjct: 6 VVVGNGAVGKSSMIQRYCK 24
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.5 bits (57), Expect = 2.8
Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 114 FKPKQL-ACIIGAIGAGKTSLLH 135
F K++ ++G AGKT++L+
Sbjct: 8 FGNKEMRILMLGLDAAGKTTILY 30
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 26.5 bits (57), Expect = 2.8
Identities = 14/139 (10%), Positives = 34/139 (24%), Gaps = 5/139 (3%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSL---GGTVSYASQEPWIFAATIRQNILFGLPY 178
+ G G GK+++L + L + G + + + L
Sbjct: 6 VTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEKQ 65
Query: 179 LRRRYADVIRVCALQDDFDSLPNGDFTVVGERGASLSGGQKARINLARAVYKNADIYLLD 238
+ ++ F + SG + + I+LL+
Sbjct: 66 K--KLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLE 123
Query: 239 DPLSAVDMHVGKHLFEDCI 257
+ + +
Sbjct: 124 ADPKIILSRQKRDTTRNRN 142
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.3 bits (57), Expect = 2.8
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 121 CIIGAIGAGKTSLLHIILN 139
+IG G GKT L+
Sbjct: 9 VLIGNAGVGKTCLVRRFTQ 27
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.5 bits (57), Expect = 2.9
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
++G G GKT+ +
Sbjct: 7 VLVGDGGTGKTTFVK 21
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.4 bits (57), Expect = 2.9
Identities = 3/15 (20%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
++G +GK++ +
Sbjct: 6 LLLGTGESGKSTFIK 20
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 26.7 bits (58), Expect = 2.9
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVS 149
+ G GAGK++ L L KV+
Sbjct: 59 VTGTPGAGKSTFLEAFGMLLIREGLKVA 86
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.4 bits (57), Expect = 2.9
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 121 CIIGAIGAGKTSLLH 135
++GA +GK++ L
Sbjct: 6 LLLGAGESGKSTFLK 20
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 26.4 bits (57), Expect = 2.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 121 CIIGAIGAGKTSLLHIILN 139
+IG G GK+ LLH +
Sbjct: 9 LVIGNAGTGKSCLLHQFIE 27
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal
domain {Clostridium acetobutylicum [TaxId: 1488]}
Length = 141
Score = 26.2 bits (57), Expect = 3.0
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 114 FKPKQ---LACIIGAIGAGKTSLLHIILNELRISSGKVSL 150
++PK + I+G + +GK+ L + +I+ K+ +
Sbjct: 1 YRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQV 40
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.3 bits (57), Expect = 3.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
+IG G GK+ LL + +
Sbjct: 6 LLIGDSGVGKSCLLVRFVED 25
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 26.6 bits (58), Expect = 3.1
Identities = 4/15 (26%), Positives = 11/15 (73%)
Query: 121 CIIGAIGAGKTSLLH 135
++GA +GK++++
Sbjct: 10 LLLGAGESGKSTIVK 24
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 26.4 bits (57), Expect = 3.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
IIG GKTS L ++
Sbjct: 9 LIIGNSSVGKTSFLFRYADD 28
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.1 bits (56), Expect = 3.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 121 CIIGAIGAGKTSLLH 135
+ GA G GK+SL+
Sbjct: 6 AVFGAGGVGKSSLVL 20
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 26.5 bits (57), Expect = 3.2
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 122 IIGAIGAGKTSLLHIILNELR 142
+ G +GK+S+ I+ L
Sbjct: 7 VSGGTASGKSSVCAKIVQLLG 27
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 26.1 bits (56), Expect = 3.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 121 CIIGAIGAGKTSLLH 135
+G GKTSL+
Sbjct: 4 VFLGEQSVGKTSLIT 18
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 26.1 bits (56), Expect = 3.4
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLR 180
I+G GAGKT++L+ + + + K ++G V S + PY R
Sbjct: 21 LILGLDGAGKTTILYRLQIG-EVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWR 79
Query: 181 RRYADVIRVCALQDDFD 197
YAD V + D D
Sbjct: 80 CYYADTAAVIFVVDSTD 96
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 26.4 bits (57), Expect = 3.4
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 7/79 (8%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPYLR 180
+G G GKT+ L+ R + K + ++ + G
Sbjct: 9 LALGDSGVGKTTFLY------RYTDNKFN-PKFITTVGIDFREKRVVYNAQGPNGSSGKA 61
Query: 181 RRYADVIRVCALQDDFDSL 199
+ + A Q+ F SL
Sbjct: 62 FKVHLQLWDTAGQERFRSL 80
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.1 bits (56), Expect = 3.5
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 121 CIIGAIGAGKTSLLH 135
++G+ G GK++L
Sbjct: 7 VVLGSGGVGKSALTV 21
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 26.2 bits (56), Expect = 3.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
++G AGK+SLL +
Sbjct: 5 GLVGYPNAGKSSLLAAMTRA 24
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 26.1 bits (56), Expect = 3.6
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 115 KPKQLA-CIIGAIGAGKTSLLHIILNEL 141
+PK + I G G GKTS+ +I EL
Sbjct: 2 QPKGINILITGTPGTGKTSMAEMIAAEL 29
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.2 bits (56), Expect = 3.6
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
++G G GK++L
Sbjct: 9 VVVGGGGVGKSALTI 23
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.1 bits (56), Expect = 3.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 121 CIIGAIGAGKTSLLH 135
++GA G GK++L
Sbjct: 7 VVVGAGGVGKSALTI 21
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 26.0 bits (56), Expect = 3.7
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
++G GK++LL ++ +
Sbjct: 5 GLVGFPSVGKSTLLSVVSSA 24
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.1 bits (56), Expect = 3.9
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
++G GK+SL+
Sbjct: 10 VLLGESAVGKSSLVL 24
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.1 bits (56), Expect = 4.1
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
++G GKTSL+
Sbjct: 7 VLLGEGCVGKTSLVL 21
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 25.9 bits (56), Expect = 4.1
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
+IG G GKT +L +
Sbjct: 10 LLIGDSGVGKTCVLFRFSED 29
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 25.8 bits (56), Expect = 4.3
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 110 VSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVS 149
+ + + + + G +GAGKT+L +L + S
Sbjct: 26 LKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKS 65
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 25.7 bits (55), Expect = 4.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 121 CIIGAIGAGKTSLLH 135
++G G GK+SL++
Sbjct: 10 ILLGDGGVGKSSLMN 24
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 25.7 bits (55), Expect = 4.5
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 121 CIIGAIGAGKTSLLHIILNELRI 143
+ G G GKT+L + ++ +
Sbjct: 8 LLTGTPGVGKTTLGKELASKSGL 30
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 25.6 bits (55), Expect = 4.8
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
++G G GKT LL
Sbjct: 10 MLVGDSGVGKTCLLV 24
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 26.2 bits (57), Expect = 4.8
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 116 PKQLACIIGAIGAGKTSLLHIILNEL 141
K+ G I +GKT+L +L
Sbjct: 153 KKRYWLFKGPIDSGKTTLAAALLELC 178
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 25.6 bits (55), Expect = 4.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 121 CIIGAIGAGKTSLLH 135
IIG G GK+ LL
Sbjct: 7 IIIGDTGVGKSCLLL 21
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 26.1 bits (56), Expect = 5.0
Identities = 7/66 (10%), Positives = 24/66 (36%)
Query: 107 LNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAA 166
+N ++ + ++ + G GK++ + + + GK + + +E
Sbjct: 25 INDKTLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLI 84
Query: 167 TIRQNI 172
+ +
Sbjct: 85 GLHNRV 90
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 25.7 bits (55), Expect = 5.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 121 CIIGAIGAGKTSLLHIILNE 140
I+G GK++LL+ +LNE
Sbjct: 4 VIVGKPNVGKSTLLNRLLNE 23
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 26.2 bits (57), Expect = 5.3
Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 6/79 (7%)
Query: 103 ADLTLNAVSITFKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPW 162
AD + + Q I G GAGKT ++ L + V + +E
Sbjct: 108 ADNAYQNMVTDREN-QSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKE-- 164
Query: 163 IFAATIRQNILFGLPYLRR 181
++ I+ P L
Sbjct: 165 ---GSLEDQIIQANPVLEA 180
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 25.7 bits (56), Expect = 5.3
Identities = 9/35 (25%), Positives = 13/35 (37%)
Query: 115 KPKQLACIIGAIGAGKTSLLHIILNELRISSGKVS 149
KP IG + GKT+L + + V
Sbjct: 1 KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVE 35
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 25.7 bits (55), Expect = 5.4
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 121 CIIGAIGAGKTSLLHIILNEL 141
++G + GKT+L+ I
Sbjct: 12 GVVGHVDHGKTTLVQAITGIW 32
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 25.7 bits (55), Expect = 5.4
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 122 IIGAIGAGKTSLLH 135
++G GKT LL
Sbjct: 14 VVGDGAVGKTCLLM 27
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 25.6 bits (55), Expect = 5.6
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 121 CIIGAIGAGKTSLLHIIL 138
G + GK++L+ +L
Sbjct: 13 LTCGNVDDGKSTLIGRLL 30
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 25.9 bits (56), Expect = 5.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 122 IIGAIGAGKTSLLHIILNE 140
++G G GK+S ++ I+ E
Sbjct: 37 VMGKGGVGKSSTVNSIIGE 55
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 25.9 bits (57), Expect = 5.8
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 118 QLACIIGAIGAGKTSLLHIILNELRISSGKVS 149
+ G G GKT L+ ++N + + G S
Sbjct: 69 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 100
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 25.9 bits (56), Expect = 5.8
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 121 CIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILF 174
+ G G+GK+S ++ + G + V + E + N++F
Sbjct: 60 AVTGETGSGKSSFINTLRGIGNEEEG--AAKTGVVEVTMERHPYKHPNIPNVVF 111
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 25.4 bits (55), Expect = 5.9
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 120 ACIIGAIGAGKTSLLHIILNELRISSGKVSL----GGTVSYASQEPWI 163
+ + G G GK+SLL+ I L++ +VS G + +Q
Sbjct: 98 STMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKF 145
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 25.6 bits (55), Expect = 6.1
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 121 CIIGAIGAGKTSLLHIIL 138
+IG + GK++L+ +L
Sbjct: 7 IVIGHVDHGKSTLVGRLL 24
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 25.6 bits (55), Expect = 6.1
Identities = 4/25 (16%), Positives = 14/25 (56%)
Query: 117 KQLACIIGAIGAGKTSLLHIILNEL 141
++ ++GA G G+ + + ++ +
Sbjct: 3 RKTLVLLGAHGVGRRHIKNTLITKH 27
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 25.7 bits (56), Expect = 6.4
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSL 150
+ G+ GAG +++ H R K
Sbjct: 9 VTGSSGAGTSTVKHTFDQIFRREGVKAVS 37
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 25.6 bits (55), Expect = 6.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 121 CIIGAIGAGKTSLLHIIL 138
IG + AGK++L IL
Sbjct: 28 VFIGHVDAGKSTLGGNIL 45
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 25.5 bits (54), Expect = 6.8
Identities = 10/49 (20%), Positives = 16/49 (32%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQ 170
G GKT L H + ++ GG + + E +R
Sbjct: 42 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRD 90
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 25.9 bits (56), Expect = 6.8
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 121 CII--GAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQEPWIFAATIRQNILFGLPY 178
I+ G GAGKT ++ L + + G + +Q P + + +L P
Sbjct: 93 SILCTGESGAGKTENTKKVIQYLAVVASS-HKGKKDTSITQGPSFSYGELEKQLLQANPI 151
Query: 179 LR 180
L
Sbjct: 152 LE 153
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 25.3 bits (54), Expect = 7.0
Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 115 KPKQLACIIGAIGAGKTSLLHIILNEL---RISSGKV 148
KP + ++G G+GK + I+ + +S+G +
Sbjct: 5 KPNVV-FVLGGPGSGKGTQCANIVRDFGWVHLSAGDL 40
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 25.1 bits (53), Expect = 7.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 121 CIIGAIGAGKTSLLHIILN 139
G AGK+S L+ + N
Sbjct: 20 AFAGRSNAGKSSALNTLTN 38
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 25.4 bits (55), Expect = 7.4
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 120 ACIIGAIGAGKTSLLHIILNELRISSGKV--SLGGTVSYASQEPWIFA 165
+IG G GKT+++ + RI G V L G + Q + A
Sbjct: 46 PVLIGEPGVGKTAIVEGLA--QRIVKGDVPEGLKGKRIVSLQMGSLLA 91
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 25.5 bits (54), Expect = 7.6
Identities = 8/47 (17%), Positives = 16/47 (34%)
Query: 114 FKPKQLACIIGAIGAGKTSLLHIILNELRISSGKVSLGGTVSYASQE 160
+ + + G GKT + H + ++ + G Y E
Sbjct: 20 IETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTE 66
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 24.9 bits (53), Expect = 8.1
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 121 CIIGAIGAGKTSLLHIILNEL 141
++G + GKT+L +
Sbjct: 9 GMVGHVDHGKTTLTKALTGVW 29
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 25.2 bits (54), Expect = 8.4
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 122 IIGAIGAGKTSLLHIILNELRISSGKVSLGG 152
I G G GK++ + + + L + KV++
Sbjct: 56 ITGVPGVGKSTTIDALGSLLTAAGHKVAVLA 86
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.139 0.414
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 956,326
Number of extensions: 42024
Number of successful extensions: 310
Number of sequences better than 10.0: 1
Number of HSP's gapped: 286
Number of HSP's successfully gapped: 167
Length of query: 265
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 181
Effective length of database: 1,254,276
Effective search space: 227023956
Effective search space used: 227023956
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)