BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15032
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R6C9|UB2V2_PONAB Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2
PE=2 SV=1
Length = 145
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 82/90 (91%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLK+E
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++INM INN+SG+V
Sbjct: 69 CGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q15819|UB2V2_HUMAN Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2
PE=1 SV=4
Length = 145
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 82/90 (91%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLK+E
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++INM INN+SG+V
Sbjct: 69 CGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q3SZ43|UB2V2_BOVIN Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2
PE=2 SV=3
Length = 145
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 82/90 (91%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLK+E
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++INM INN+SG+V
Sbjct: 69 CGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q5F3Z3|UB2V2_CHICK Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus
GN=UBE2V2 PE=2 SV=1
Length = 144
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 82/90 (91%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLK+E
Sbjct: 8 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVE 67
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++INM INN++G+V
Sbjct: 68 CGPKYPEAPPTVRFVTKINMNGINNSNGMV 97
>sp|Q9D2M8|UB2V2_MOUSE Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus GN=Ube2v2
PE=2 SV=4
Length = 145
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 81/90 (90%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLK+E
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CG +YP+ PP RFV++INM INN+SG+V
Sbjct: 69 CGSKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q7M767|UB2V2_RAT Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus
GN=Ube2v2 PE=1 SV=3
Length = 145
Score = 160 bits (406), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 81/90 (90%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLK+E
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CG +YP+ PP RFV++INM INN+SG+V
Sbjct: 69 CGSKYPEAPPSVRFVTKINMNGINNSSGMV 98
>sp|Q9CZY3|UB2V1_MOUSE Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1
PE=1 SV=1
Length = 147
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 89/105 (84%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLKIE
Sbjct: 11 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIE 70
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIVVVIMFWVMIEAKATH 180
CGP+YP+ PP RFV+R+NM+ +++++G+V V+ + + +H
Sbjct: 71 CGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRATAVLAKWQNSH 115
>sp|Q90879|UB2V1_CHICK Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus
GN=UBE2V1 PE=2 SV=2
Length = 145
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 82/90 (91%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLKIE
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++INM +N+++G+V
Sbjct: 69 CGPKYPEAPPFVRFVTKINMNGVNSSNGVV 98
>sp|Q13404|UB2V1_HUMAN Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1
PE=1 SV=2
Length = 147
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 82/90 (91%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLKIE
Sbjct: 11 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIE 70
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++INM +N+++G+V
Sbjct: 71 CGPKYPEAPPFVRFVTKINMNGVNSSNGVV 100
>sp|Q3SZ52|UB2V1_BOVIN Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 82/90 (91%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLKIE
Sbjct: 11 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIE 70
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++INM +N+++G+V
Sbjct: 71 CGPKYPEAPPFVRFVTKINMNGVNSSNGVV 100
>sp|Q7ZYP0|UB2V2_XENLA Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis
GN=ube2v2 PE=2 SV=1
Length = 145
Score = 157 bits (396), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 81/90 (90%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSL++E
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV+++NM INN++G V
Sbjct: 69 CGPKYPEAPPTVRFVTKMNMNGINNSNGTV 98
>sp|Q6PEH5|UB2V2_DANRE Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2
PE=2 SV=1
Length = 145
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 81/90 (90%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGP RT YENR+YSLK+E
Sbjct: 9 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPARTNYENRIYSLKVE 68
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+YP+ PP RFV++I+M INN++G+V
Sbjct: 69 CGPKYPEVPPTVRFVTKISMNGINNSNGMV 98
>sp|Q5R4Z6|UB2V1_PONAB Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1
PE=2 SV=1
Length = 147
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 81/90 (90%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
VPRNFRLLEELE GQ+GVGDGT+SWGLE+D+DMTLT WTGMIIGPPRT YENR+YSLKIE
Sbjct: 11 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIE 70
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CGP+ P+ PP RFV++INM +N+++G+V
Sbjct: 71 CGPKCPEAPPFVRFVTKINMNGVNSSNGVV 100
>sp|Q93YP0|UEV1A_ARATH Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana
GN=UEV1A PE=1 SV=1
Length = 158
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 73/96 (76%)
Query: 75 VVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKI 134
VVPRNFRLLEELE G++G+GDGT+S+G+++ DD+ + WTG I+GPP T YE +++ LK+
Sbjct: 9 VVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKL 68
Query: 135 ECGPRYPDEPPQCRFVSRINMTCINNTSGIVVVIMF 170
CG YP+ PP RF +RINM C+N +G+V +F
Sbjct: 69 FCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLF 104
>sp|Q9SJ44|UEV1C_ARATH Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana
GN=UEV1C PE=1 SV=1
Length = 145
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 75/99 (75%)
Query: 75 VVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKI 134
VVPRNFRLLEELE G++G+GDGT+S+G+++ DD+ + WTG IIGP T +E R+Y LK+
Sbjct: 10 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 69
Query: 135 ECGPRYPDEPPQCRFVSRINMTCINNTSGIVVVIMFWVM 173
C YP++PP RF SRINMTC+N+ +G+V F V+
Sbjct: 70 FCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVL 108
>sp|P53152|MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MMS2 PE=1
SV=1
Length = 137
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 71/93 (76%)
Query: 73 FSVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSL 132
S VPRNFRLLEELE G++G G + S+GL + DD+T+T W G I+GPP + +ENR+YSL
Sbjct: 1 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSL 60
Query: 133 KIECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
I+CGP YPD PP+ F+S+IN+ C+N T+G V
Sbjct: 61 SIDCGPNYPDSPPKVTFISKINLPCVNPTTGEV 93
>sp|Q9CAB6|UEV1B_ARATH Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana
GN=UEV1B PE=1 SV=1
Length = 159
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 70/91 (76%)
Query: 75 VVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKI 134
VVPRNFRLLEELE G++G+GDGT+S+G+++ DD+ + WTG I+GP T YE +++ LK+
Sbjct: 9 VVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKL 68
Query: 135 ECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
CG YP+ PP RF SRINM C+N +G+V
Sbjct: 69 FCGKDYPESPPTVRFQSRINMACVNPENGVV 99
>sp|Q9SVD7|UEV1D_ARATH Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana
GN=UEV1D PE=1 SV=1
Length = 146
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 74/99 (74%)
Query: 75 VVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKI 134
VVPRNFRLLEELE G++G+GDGT+S+G+++ DD+ + WTG IIGP T +E R+Y LK+
Sbjct: 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKL 70
Query: 135 ECGPRYPDEPPQCRFVSRINMTCINNTSGIVVVIMFWVM 173
C YP++PP RF SR+NM C+N+ +G+V F ++
Sbjct: 71 FCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLL 109
>sp|Q54D06|UBE2V_DICDI Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium
discoideum GN=ube2v PE=3 SV=1
Length = 138
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 69/93 (74%)
Query: 73 FSVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSL 132
+ +PRNF LLEELE G++ GDGTIS+GLE+ DD+ L+ W G IIGP TP++NR YSL
Sbjct: 1 MTTIPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSL 60
Query: 133 KIECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
K+ C YP++PP RF ++IN+ C+N +G+V
Sbjct: 61 KLYCDKDYPNKPPTVRFTTKINIGCVNQQNGVV 93
>sp|O74983|MMS2_SCHPO Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spm2 PE=1 SV=1
Length = 139
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 66/93 (70%)
Query: 73 FSVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSL 132
+ VPRNF+LLEELE G++G+G+ + S+GL N DD+TL+ W I+GP + +ENR+YSL
Sbjct: 1 MAKVPRNFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSL 60
Query: 133 KIECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
KI C YPD PP FVSRIN+ ++ +G V
Sbjct: 61 KIHCDANYPDAPPIVTFVSRINLPGVDGETGKV 93
>sp|P61087|UBE2K_MOUSE Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=1
SV=3
Length = 200
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 107 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
D T G I GPP TPYE Y L+I+ YP PP+ RF+++I I++ +G +
Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
>sp|P61086|UBE2K_HUMAN Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1
SV=3
Length = 200
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 107 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
D T G I GPP TPYE Y L+I+ YP PP+ RF+++I I++ +G +
Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
>sp|P61085|UBE2K_BOVIN Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3
Length = 200
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 107 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
D T G I GPP TPYE Y L+I+ YP PP+ RF+++I I++ +G +
Sbjct: 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 81 RLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRY 140
R+L+EL+ Q+ + + D + HW I+GPP +PY ++ + I P Y
Sbjct: 5 RILKELKDLQKDPPSNCSAGPVAED----MFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 141 PDEPPQCRFVSRINMTCINNTSGIVVVIM 169
P +PP+ F +++ IN+ I + I+
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDIL 89
>sp|Q8LGF7|PEX4_ARATH Protein PEROXIN-4 OS=Arabidopsis thaliana GN=PEX4 PE=1 SV=1
Length = 157
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 81 RLLEELEHGQR-GVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPR 139
RL +E + QR V D I DD + WT +I GP TPYE ++ L
Sbjct: 7 RLFKEYKEVQREKVADPDIQLIC---DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
Query: 140 YPDEPPQCRFVSRI 153
YP +PPQ RF+++I
Sbjct: 64 YPLQPPQVRFLTKI 77
>sp|Q86IZ3|UBCX_DICDI Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum
GN=pex4 PE=3 SV=1
Length = 149
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 106 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153
D+ L W +I GPP TPYEN + L I YP +PP +FV++I
Sbjct: 26 DESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKI 73
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G G D+++ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPTGVS--GAPTDNNIMI--WNAVIFGPHDTPFEDGTFKLTIE 58
Query: 136 CGPRYPDEPPQCRFVSRINMTCINNTSGIVVVIM 169
YP++PP RFVS++ + GI + I+
Sbjct: 59 FTEEYPNKPPTVRFVSKVFHPNVYADGGICLDIL 92
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 81 RLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRY 140
R+ +EL+ R S G DD L HW I+GPP +PY+ ++ L I Y
Sbjct: 5 RIQKELQDLGRD-PPAQCSAGPVGDD---LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 141 PDEPPQCRFVSRINMTCINNTSGIVVVIM 169
P +PP+ F +RI IN+ I + I+
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDIL 89
>sp|O74810|UBC1_SCHPO Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc1 PE=3 SV=2
Length = 217
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECG 137
R+ R+ +EL Q+ G W + +D ++H GM GP TPYE + + IE
Sbjct: 5 RSRRIAKELADVQQDKQAGIQVWTINDD----ISHLKGMFRGPEGTPYEGGYFVVDIEIP 60
Query: 138 PRYPDEPPQCRFVSRINMTCINNTSGIV 165
YP PP+ F ++I +++ +G +
Sbjct: 61 IDYPFRPPKMNFDTKIYHPNVSSQTGAI 88
>sp|P52486|UBCD4_DROME Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster
GN=UbcD4 PE=1 SV=2
Length = 199
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 109 TLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTCINNTSGIV 165
+ T G I GPP TPYE + L+I+ YP PP+ RF++RI I++ +G +
Sbjct: 35 SWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAI 91
>sp|O74201|UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=UBC2 PE=2 SV=1
Length = 179
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q+ G + L ++ + W +IIGP TP+E+ + L +
Sbjct: 3 TPARRRLMRDFKRMQQDPPSGVSASPLPDN----VMKWNAVIIGPSDTPFEDGTFRLLLS 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
+YP++PPQ +F+S +
Sbjct: 59 FDEQYPNKPPQVKFISEM 76
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 81 RLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRY 140
R+ +EL+ R S G DD L HW I+GPP +PY+ ++ L I Y
Sbjct: 5 RINKELQDLGRDPP-AQCSAGPVGDD---LFHWQATIMGPPDSPYQGGVFFLTIHFPTDY 60
Query: 141 PDEPPQCRFVSRINMTCINNTSGIVVVIM 169
P +PP+ F +RI IN+ I + I+
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDIL 89
>sp|Q6BU36|UBC2_DEBHA Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=UBC2 PE=3 SV=1
Length = 168
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q+ G + L ++ + W +IIGP TP+E+ + L ++
Sbjct: 3 TPAKRRLMRDFKRMQQDAPSGVSASPLPDN----VMSWNAVIIGPADTPFEDGTFRLILQ 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
+YP++PP +F+S +
Sbjct: 59 FDEQYPNKPPSVKFISEM 76
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q+ G IS G +D+++TL W +I GP TP++ + L ++
Sbjct: 3 TPARKRLMRDFKRLQQDPPAG-IS-GAPHDNNITL--WNAVIFGPDDTPWDGGTFKLTLQ 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RFVSR+
Sbjct: 59 FTEDYPNKPPTVRFVSRM 76
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G EN+ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPAGVSGAPSENN----IMVWNAVIFGPEGTPFEDGTFKLTIE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RFVS++
Sbjct: 59 FTEEYPNKPPTVRFVSKM 76
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G EN+ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPAGVSGAPSENN----IMVWNAVIFGPEGTPFEDGTFKLTIE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RFVS++
Sbjct: 59 FTEEYPNKPPTVRFVSKM 76
>sp|Q75EB8|UBC2_ASHGO Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC2
PE=3 SV=1
Length = 170
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + + G + L ++ + W MIIGP TPYE+ + L +E
Sbjct: 3 TPARRRLMRDFKRMKEDAPPGVSASPLPDN----VMVWNAMIIGPADTPYEDGTFRLLLE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP +F+S +
Sbjct: 59 FDEEYPNKPPHVKFLSEM 76
>sp|P06104|UBC2_YEAST Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD6 PE=1 SV=1
Length = 172
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + + G + L ++ + W MIIGP TPYE+ + L +E
Sbjct: 3 TPARRRLMRDFKRMKEDAPPGVSASPLPDN----VMVWNAMIIGPADTPYEDGTFRLLLE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP +F+S +
Sbjct: 59 FDEEYPNKPPHVKFLSEM 76
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G EN+ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RF+S++
Sbjct: 59 FSEEYPNKPPTVRFLSKM 76
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G EN+ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RF+S++
Sbjct: 59 FSEEYPNKPPTVRFLSKM 76
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G EN+ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RF+S++
Sbjct: 59 FSEEYPNKPPTVRFLSKM 76
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G EN+ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RF+S++
Sbjct: 59 FSEEYPNKPPTVRFLSKM 76
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + Q G EN+ + W +I GP TP+E+ + L IE
Sbjct: 3 TPARRRLMRDFKRLQEDPPVGVSGAPSENN----IMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP RF+S++
Sbjct: 59 FSEEYPNKPPTVRFLSKM 76
>sp|P34477|UBC7_CAEEL Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis
elegans GN=ubc-7 PE=1 SV=1
Length = 164
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 82 LLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYP 141
L ++L +R DG S GL +D+D + W ++IGPP T YE + ++ YP
Sbjct: 8 LKKQLADMRRVPVDG-FSAGLVDDND--IYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 64
Query: 142 DEPPQCRFVSRINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTG--TPDQVYLIV-- 197
+PP+ +F+S I I+ + + I+ H P D K G P++ +L V
Sbjct: 65 QKPPKMKFISEIWHPNIDKEGNVCISIL----------HDPGDDKWGYERPEERWLPVHT 114
Query: 198 --CVLIRYQVDLTDRPFQ 213
+L+ LTD F+
Sbjct: 115 VETILLSVISMLTDPNFE 132
>sp|Q6CUD9|UBC2_KLULA Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=UBC2 PE=3 SV=1
Length = 164
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + + G + L ++ + W MIIGP TPYE+ + L +E
Sbjct: 3 TPARRRLMRDFKRMKEDSPPGVSASPLPDN----VMIWNAMIIGPADTPYEDGTFRLLLE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP +F+S +
Sbjct: 59 FDEEYPNKPPHVKFLSEM 76
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=UBC2 PE=3 SV=1
Length = 169
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 101 GLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153
G N D++ + W +I GPP TP+E+ + L + YP++PP RF+S++
Sbjct: 26 GSPNPDNIMV--WNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKM 76
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 101 GLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153
G N D++ + W +I GPP TP+E+ + L + YP++PP RF+S++
Sbjct: 26 GSPNPDNIMV--WNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKM 76
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIE 135
P RL+ + + + G + L ++ + W MIIGP TPYE+ + L +E
Sbjct: 3 TPARRRLMRDFKRMKEDSPPGVSASPLPDN----VMVWNAMIIGPADTPYEDGTFRLLLE 58
Query: 136 CGPRYPDEPPQCRFVSRI 153
YP++PP +F+S +
Sbjct: 59 FDEDYPNKPPHVKFLSEM 76
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29
PE=2 SV=1
Length = 148
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 81 RLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRY 140
R+L+EL+ QR + S G +D + HW I+GP +PY ++ + I P Y
Sbjct: 5 RILKELKELQRD-PPVSCSAGPTGED---MFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 141 PDEPPQCRFVSRINMTCINNTSGIVVVIM 169
P +PP+ F +++ IN+ I + I+
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDIL 89
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 107 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153
D + HW +I GP TP++ + L + YP++PP RFVSR+
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRM 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.461
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,969,759
Number of Sequences: 539616
Number of extensions: 3802136
Number of successful extensions: 7798
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 7555
Number of HSP's gapped (non-prelim): 262
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)