Query psy15032
Match_columns 226
No_of_seqs 150 out of 1489
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 18:41:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15032.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15032hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a4d_A Ubiquitin-conjugating e 100.0 1.6E-35 5.3E-40 244.5 16.2 133 73-214 21-153 (160)
2 2q0v_A Ubiquitin-conjugating e 100.0 2.5E-35 8.7E-40 242.2 16.0 136 72-219 16-152 (156)
3 2awf_A Ubiquitin-conjugating e 100.0 1.7E-35 6E-40 246.4 15.0 136 72-219 12-156 (172)
4 2ucz_A UBC7, ubiquitin conjuga 100.0 1.7E-35 6E-40 244.4 12.8 129 77-217 4-141 (165)
5 3h8k_A Ubiquitin-conjugating e 100.0 2.5E-35 8.7E-40 243.0 13.7 129 77-217 3-140 (164)
6 1yh2_A HSPC150 protein similar 100.0 2.5E-35 8.7E-40 244.6 13.3 128 76-216 3-130 (169)
7 1jat_B Ubiquitin-conjugating e 100.0 4.4E-35 1.5E-39 235.8 14.2 129 76-218 5-136 (138)
8 2fo3_A Ubiquitin-conjugating e 100.0 5.3E-35 1.8E-39 231.7 13.5 114 78-206 7-121 (125)
9 2h2y_A Ubiquitin-conjugating e 100.0 1.5E-34 5.2E-39 232.3 16.1 114 77-205 20-134 (136)
10 2hlw_A Ubiquitin-conjugating e 100.0 8.3E-35 2.8E-39 242.2 14.7 123 74-204 32-154 (170)
11 2e2c_A Ubiquitin conjugating e 100.0 4.2E-35 1.4E-39 240.2 12.7 129 73-218 5-133 (156)
12 3rcz_B SUMO-conjugating enzyme 100.0 1.5E-34 5.3E-39 238.9 14.4 130 76-217 9-140 (163)
13 4gpr_A Ubiquitin-conjugating e 100.0 1.2E-34 4.2E-39 236.3 12.8 124 77-217 4-127 (151)
14 2ayv_A Ubiquitin-conjugating e 100.0 1.5E-34 5.1E-39 239.7 13.2 123 77-216 21-143 (166)
15 2r0j_A Ubiquitin carrier prote 100.0 1.7E-34 5.7E-39 235.0 12.7 122 79-217 3-124 (149)
16 2c2v_B Ubiquitin-conjugating e 100.0 1.1E-34 3.7E-39 237.4 11.5 123 78-217 6-128 (154)
17 1jat_A Ubiquitin-conjugating e 100.0 1.5E-34 5E-39 236.7 12.1 123 78-217 6-128 (155)
18 1fxt_A Ubiquitin-conjugating e 100.0 8.2E-35 2.8E-39 236.7 10.5 125 78-217 2-126 (149)
19 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.7E-34 5.8E-39 240.0 12.5 123 77-216 4-126 (169)
20 3rz3_A Ubiquitin-conjugating e 100.0 1.9E-34 6.6E-39 242.2 13.0 129 77-217 7-144 (183)
21 1z2u_A Ubiquitin-conjugating e 100.0 2E-34 6.7E-39 234.7 12.5 122 78-216 5-126 (150)
22 2gjd_A Ubiquitin-conjugating e 100.0 3.4E-34 1.2E-38 235.2 13.9 129 77-217 4-134 (157)
23 2c4o_A Ubiquitin-conjugating e 100.0 2.8E-34 9.6E-39 237.7 13.2 123 77-216 19-141 (165)
24 1zdn_A Ubiquitin-conjugating e 100.0 2.3E-34 7.8E-39 236.4 12.3 124 76-216 12-135 (158)
25 2pwq_A Ubiquitin conjugating e 100.0 1.6E-34 5.5E-39 248.8 11.9 133 68-216 14-146 (216)
26 2aak_A UBC1, ubiquitin conjuga 100.0 2.8E-34 9.5E-39 234.3 12.6 123 77-216 4-126 (152)
27 2grr_A Ubiquitin-conjugating e 100.0 2.9E-34 9.8E-39 236.5 11.9 129 77-217 7-137 (161)
28 1yrv_A Ubiquitin-conjugating l 100.0 2.1E-34 7.3E-39 239.4 10.9 128 76-217 22-149 (169)
29 1i7k_A Ubiquitin-conjugating e 100.0 4.9E-34 1.7E-38 239.4 11.4 126 76-218 29-154 (179)
30 3fn1_B NEDD8-conjugating enzym 100.0 6.6E-34 2.3E-38 235.3 11.7 131 74-216 11-143 (167)
31 2bep_A Ubiquitin-conjugating e 100.0 1E-33 3.5E-38 232.6 12.4 125 77-217 8-135 (159)
32 2f4z_A Tgtwinscan_2721 - E2 do 100.0 8.5E-34 2.9E-38 240.5 12.2 125 77-217 32-169 (193)
33 2a7l_A Hypothetical ubiquitin- 100.0 2.6E-33 9E-38 225.5 13.2 108 80-202 25-136 (136)
34 3bzh_A Ubiquitin-conjugating e 100.0 2.7E-33 9.1E-38 237.6 13.0 123 77-216 48-170 (194)
35 1wzv_A Ubiquitin-conjugating e 100.0 2.5E-33 8.5E-38 229.3 11.0 123 77-216 4-127 (155)
36 3k9o_A Ubiquitin-conjugating e 100.0 3.7E-33 1.3E-37 237.3 12.3 124 77-216 5-131 (201)
37 2y9m_A Ubiquitin-conjugating e 100.0 1.1E-32 3.7E-37 229.5 12.9 128 77-217 6-144 (172)
38 1c4z_D UBCH7, ubiquitin conjug 100.0 2.6E-33 9E-38 228.9 8.2 124 78-217 3-126 (154)
39 1y8x_A Ubiquitin-conjugating e 100.0 1.3E-32 4.3E-37 226.7 12.0 122 77-217 6-127 (160)
40 1tte_A Ubiquitin-conjugating e 100.0 3.1E-33 1E-37 240.6 7.9 123 78-215 3-125 (215)
41 2nvu_C NEDD8-conjugating enzym 100.0 2.4E-32 8.3E-37 229.1 12.3 123 76-217 25-147 (180)
42 3e46_A Ubiquitin-conjugating e 100.0 3.3E-32 1.1E-36 239.3 12.6 126 75-216 55-183 (253)
43 2onu_A Ubiquitin-conjugating e 100.0 6.3E-32 2.2E-36 220.8 8.8 119 79-216 4-123 (152)
44 1yf9_A Ubiquitin carrier prote 100.0 6.6E-32 2.3E-36 224.8 8.7 122 75-216 10-132 (171)
45 2z5d_A Ubiquitin-conjugating e 100.0 2.4E-31 8.1E-36 223.1 9.7 121 77-217 25-146 (179)
46 3ceg_A Baculoviral IAP repeat- 100.0 1E-30 3.6E-35 236.5 13.7 132 74-214 73-215 (323)
47 2f4w_A Ubiquitin-conjugating e 100.0 1.6E-30 5.4E-35 219.3 13.6 117 76-206 13-129 (187)
48 4ddg_A Ubiquitin-conjugating e 100.0 6.4E-31 2.2E-35 243.9 12.2 124 77-217 3-126 (399)
49 4ds2_A Ubiquitin-conjugating e 100.0 3.9E-31 1.3E-35 219.0 9.2 125 77-216 8-147 (167)
50 3o2u_A NEDD8-conjugating enzym 100.0 1.1E-30 3.6E-35 220.9 11.3 123 76-217 28-156 (190)
51 1zuo_A Hypothetical protein LO 100.0 1.2E-30 4.2E-35 219.9 9.6 118 75-206 25-158 (186)
52 2z6o_A UFM1-conjugating enzyme 99.8 1.2E-22 4.1E-27 167.7 1.8 100 77-195 32-144 (172)
53 3r3q_A Suppressor protein STP2 99.6 1.2E-15 4.2E-20 125.8 9.1 114 79-206 30-159 (162)
54 3kpa_A Probable ubiquitin fold 99.6 2.3E-16 7.9E-21 128.1 0.8 81 77-168 34-125 (168)
55 3obq_A Tumor susceptibility ge 99.4 2.9E-12 9.8E-17 104.0 10.9 107 82-204 25-139 (146)
56 2ebm_A RWD domain-containing p 93.7 0.26 9.1E-06 37.4 7.7 68 78-151 11-78 (128)
57 2day_A Ring finger protein 25; 92.0 1.1 3.8E-05 33.8 9.2 112 80-204 11-125 (128)
58 2yz0_A Serine/threonine-protei 89.0 0.84 2.9E-05 35.0 6.0 71 79-151 12-85 (138)
59 2ebk_A RWD domain-containing p 87.3 1.2 4E-05 33.8 5.9 68 81-151 11-79 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 84.5 0.49 1.7E-05 36.2 2.4 114 77-204 10-129 (137)
61 2dax_A Protein C21ORF6; RWD do 83.7 0.77 2.6E-05 36.1 3.3 68 129-206 74-141 (152)
62 2daw_A RWD domain containing p 82.6 1.1 3.6E-05 35.5 3.7 24 129-152 76-99 (154)
63 3zqs_A E3 ubiquitin-protein li 73.3 8.6 0.00029 31.7 6.6 85 81-204 5-89 (186)
64 3u3c_B Paxillin LD2 peptide; 4 32.9 33 0.0011 18.9 2.3 20 77-96 5-24 (26)
65 2bum_A Protocatechuate 3,4-dio 20.4 77 0.0026 26.2 3.5 26 126-151 109-139 (209)
No 1
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.6e-35 Score=244.53 Aligned_cols=133 Identities=55% Similarity=0.951 Sum_probs=112.3
Q ss_pred cCCccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecc
Q psy15032 73 FSVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSR 152 (226)
Q Consensus 73 ~~~~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~Tp 152 (226)
.+.++|.+||++|+++|++++++|.+++.+.++++.|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 21 ~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 21 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC
Confidence 45678999999999999999988878888755543359999999999999999999999999999999999999999999
Q ss_pred cccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCC
Q psy15032 153 INMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQP 214 (226)
Q Consensus 153 I~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~ 214 (226)
||||||+..+|+||+++|..+ +.|+|+++ |++||++|++||.+..+ .+.|..+
T Consensus 101 i~HPNV~~~~G~ICl~iL~~~-----~~WsP~~t---i~~vL~sI~~ll~~~pn-~~~P~n~ 153 (160)
T 2a4d_A 101 INMNGVNSSNGVVDPRAISVL-----AKWQNSYS---IKVVLQELRRLMMSKEN-MKLPQPP 153 (160)
T ss_dssp CCCTTBCTTTCBBCGGGSHHH-----HTCCTTCC---HHHHHHHHHHHHTSTTT-TTCCCCC
T ss_pred ceeCCEECCCCEEehhhcCCc-----cCCCccCc---HHHHHHHHHHHHccCCC-CCCCCCh
Confidence 999999966999996644433 36999876 99999999999975423 2445444
No 2
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.5e-35 Score=242.20 Aligned_cols=136 Identities=37% Similarity=0.741 Sum_probs=117.3
Q ss_pred ccCCccHHHHHHHHHHHhHcC-CCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeee
Q psy15032 72 LFSVVPRNFRLLEELEHGQRG-VGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFV 150 (226)
Q Consensus 72 s~~~~~r~rRL~kEL~~L~~~-~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~ 150 (226)
..+.++|.+||++||++|+++ +++| +++.+.++++.|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~~~-i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 94 (156)
T 2q0v_A 16 FQGIVPRSFRLLDELERGQKGNVSEG-VSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFD 94 (156)
T ss_dssp CSSCCCHHHHHHHHHHHHHCC-CCTT-EEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CcccchHHHHHHHHHHHHHhCCCCCC-eEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEE
Confidence 355678999999999999998 5556 88888765545799999999999999999999999999999999999999999
Q ss_pred cccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcccCC
Q psy15032 151 SRINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLSGL 219 (226)
Q Consensus 151 TpI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~~l 219 (226)
|+||||||+ .+|+||.+-|++|+ .|+|+++ |++||++|++||.+++. ++++||.-+.+
T Consensus 95 t~i~HPNV~-~~G~icisCL~iL~-----~WsP~~t---i~~vL~sI~~ll~~Pn~--~~p~n~~aa~~ 152 (156)
T 2q0v_A 95 TKIEMSCVD-NCGRVIKNNLHILK-----NWNRNYT---IETILISLRQEMLSSAN--KRLPQPNEGEV 152 (156)
T ss_dssp BCCCCTTBC-TTSBBCGGGSHHHH-----TCCTTCC---HHHHHHHHHHHTTSTTT--TTCCCCCTTCB
T ss_pred cccccCCCc-cCCeEehhhccccc-----CCCCcCc---HHHHHHHHHHHHhCCCC--CCcCChHHHHH
Confidence 999999999 88999322256776 3999875 99999999999999854 78888876654
No 3
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.7e-35 Score=246.45 Aligned_cols=136 Identities=22% Similarity=0.354 Sum_probs=109.2
Q ss_pred ccCCccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeec
Q psy15032 72 LFSVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVS 151 (226)
Q Consensus 72 s~~~~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~T 151 (226)
++....+.|||++||++|++++++| +++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 12 ~~~~~~~~~rL~kEl~~l~~~~~~g-i~~~p~~~~--nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T 88 (172)
T 2awf_A 12 SGLVPRGSLLLRRQLAELNKNPVEG-FSAGLIDDN--DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFIT 88 (172)
T ss_dssp -CCCCTTHHHHHHHHHHHHHSCCTT-EEEEESSTT--CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCC-EEEEECCCc--cccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccC
Confidence 4445568999999999999998888 888887644 7999999999999999999999999999999999999999999
Q ss_pred ccccceeeCCCCeEEccchhhcccc---------cCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcccCC
Q psy15032 152 RINMTCINNTSGIVVVIMFWVMIEA---------KATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLSGL 219 (226)
Q Consensus 152 pI~HPNV~~~~G~ICl~~LsiL~~w---------~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~~l 219 (226)
+||||||+ .+|+||+ ++|..| ..+.|+|+++ |++||++|++||.+|+. +.|+++..+++
T Consensus 89 ~i~HPNV~-~~G~ICl---siL~~~~~d~~~~~~~~~~WsP~~t---i~~vL~sI~sll~~Pn~--~~p~n~~aa~~ 156 (172)
T 2awf_A 89 EIWHPNVD-KNGDVCI---SILHEPGEDKYGYEKPEERWLPIHT---VETIMISVISMLADPNG--DSPANVDAAKE 156 (172)
T ss_dssp CCCCTTBC-TTCBBCC---GGGSCC---------CTTSCCTTCC---HHHHHHHHHHHHSCC---------------
T ss_pred CCccCCCC-CCCcEeh---hhcCCcccccccccccCCCCCCcCc---HHHHHHHHHHHHHCcCC--CCccCHHHHHH
Confidence 99999999 8999995 567643 2368999876 99999999999999854 67888877665
No 4
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-35 Score=244.37 Aligned_cols=129 Identities=22% Similarity=0.375 Sum_probs=112.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++|+++|++++++| +++.+.+++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~g-i~~~~~~~~--~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 4 TAQKRLLKELQQLIKDSPPG-IVAGPKSEN--NIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEESSSS--CCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEECCCC--CccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 47899999999999998888 888876543 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccc---------cCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEA---------KATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w---------~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+ .+|+||+ ++|..| ..+.|+|+++ |++||++|++||.+|+. +.|+++..+
T Consensus 81 Nv~-~~G~iCl---~iL~~~~~~~~~~~~~~~~W~p~~~---i~~vL~si~~ll~~Pn~--~~p~n~~aa 141 (165)
T 2ucz_A 81 NIY-PNGEVCI---SILHSPGDDPNMYELAEERWSPVQS---VEKILLSVMSMLSEPNI--ESGANIDAC 141 (165)
T ss_dssp TBC-TTSBBCC---GGGSCCCSCTTSTTTTTTSCCTTCC---HHHHHHHHHHHHHSCCG--GGCCCHHHH
T ss_pred CCC-CCCcEee---hhhCCccccccccCCCCCCCCCcCc---HHHHHHHHHHHHhCCCC--CCchhHHHH
Confidence 999 8999995 567432 2578999876 99999999999999854 566665443
No 5
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.5e-35 Score=243.01 Aligned_cols=129 Identities=21% Similarity=0.322 Sum_probs=113.5
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.|||++||++|++++++| +++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 3 ~a~~RL~kEl~~l~~~~~~g-i~~~~~~~~--nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEG-IVAGPMNEE--NFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 79 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEESSTT--CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEECCCC--CccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccC
Confidence 36799999999999999888 888877654 699999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhccccc---------CCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAK---------ATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~---------~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+ .+|+|| |++|..|. .+.|+|+++ |++||++|++||.+++. +.|+++..+
T Consensus 80 NV~-~~G~iC---l~iL~~~~~~~~~~~~~~~~W~p~~t---i~~vL~~i~~ll~~pn~--~~p~n~~aa 140 (164)
T 3h8k_A 80 NIY-PDGRVC---ISILHAPGDDPMGYESSAERWSPVQS---VEKILLSVVSMLAEPND--ESGANVDAS 140 (164)
T ss_dssp TBC-TTSBBC---CGGGSCSCSCCCSCCTTCCCCCTTCC---HHHHHHHHHHHHHSCCC--SSCSSHHHH
T ss_pred CCC-CCCcEe---eecccCcccccccccccccCCCCCCc---HHHHHHHHHHHHcCCCC--CCccCHHHH
Confidence 999 899999 45776442 378999876 99999999999999854 667665443
No 6
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-35 Score=244.63 Aligned_cols=128 Identities=26% Similarity=0.384 Sum_probs=113.9
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccc
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINM 155 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~H 155 (226)
+.+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+|||
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~g-i~~~~~~~---~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPG-ITCWQDKD---QMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYH 78 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTT-EEEEESSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCC-EEEEeCCC---chheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcc
Confidence 357899999999999998888 88887654 79999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
|||+ .+|+|| |++|+.|..+.|+|+++ |.+||++|++||.+++. +.|+++..
T Consensus 79 PNv~-~~G~iC---l~iL~~~~~~~W~p~~~---i~~vL~si~~ll~~p~~--~~p~n~~a 130 (169)
T 1yh2_A 79 PNID-SAGRIC---LDVLKLPPKGAWRPSLN---IATVLTSIQLLMSEPNP--DDPLMADI 130 (169)
T ss_dssp TTBC-TTCBBC---CGGGSCTTTSCCCTTSC---HHHHHHHHHHHHHSCCT--TSCSCHHH
T ss_pred ccCC-cCCeEe---cccccCCcccCCCCCCc---HHHHHHHHHHHHhCCCC--cchHhHHH
Confidence 9999 999999 55777666678999876 99999999999999854 56666543
No 7
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.4e-35 Score=235.80 Aligned_cols=129 Identities=43% Similarity=0.821 Sum_probs=110.0
Q ss_pred ccHHHHHHHHHHHhHcC-CCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccc
Q psy15032 76 VPRNFRLLEELEHGQRG-VGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRIN 154 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~-~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~ 154 (226)
++|.+||++|+++|+++ ++.| +++.+.++++.|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~-~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 83 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPES-CSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKIN 83 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CC-EEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-EEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccc
Confidence 46899999999999998 5666 888886654447999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeE--EccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcccC
Q psy15032 155 MTCINNTSGIV--VVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLSG 218 (226)
Q Consensus 155 HPNV~~~~G~I--Cl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~~ 218 (226)
||||+..+|+| | |++|+ .|+|+++ |++||++|++||.+++. ++++||.-+.
T Consensus 84 HPnv~~~~G~i~~c---L~~l~-----~W~p~~~---i~~vl~~i~~ll~~pn~--~~p~~~~~~~ 136 (138)
T 1jat_B 84 LPCVNPTTGEVQTD---FHTLR-----DWKRAYT---METLLLDLRKEMATPAN--KKLRQPKEGE 136 (138)
T ss_dssp CTTBCTTTCBBCTT---SHHHH-----TCCTTCC---HHHHHHHHHHHHTSHHH--HTSCCCCTTC
T ss_pred cCCEeCCCCEEeee---cccCC-----CCCCcCc---HHHHHHHHHHHHcCCCC--CCCCCcchhh
Confidence 99999435999 8 55665 5899775 99999999999999865 6778876543
No 8
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-35 Score=231.71 Aligned_cols=114 Identities=20% Similarity=0.343 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccc-ccc
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI-NMT 156 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI-~HP 156 (226)
+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 7 a~~RL~kEl~~l~~~~~~~-~~~~~~~~---~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPIN-CTLDVHPN---NIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp --CHHHHHHHHHHHSCCTT-EEEEECTT---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEeCcc---hhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 5689999999999999888 88877544 799999999999999999999999999999999999999999997 999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVD 206 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~ 206 (226)
||+ .+|+||++ +|+ +.|+|+++ |++||++|++||.+++.
T Consensus 83 nv~-~~G~iCl~---iL~----~~W~P~~~---i~~vl~si~~ll~~p~~ 121 (125)
T 2fo3_A 83 HVY-SNGDICLS---LLG----DDYNPSLS---ISGLVLSIISMLSSAKE 121 (125)
T ss_dssp TBC-TTSBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHC----
T ss_pred cCC-CCCEEEch---hcC----CCCCCCCc---HHHHHHHHHHHHhCccc
Confidence 999 89999955 665 47999876 99999999999999944
No 9
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-34 Score=232.34 Aligned_cols=114 Identities=20% Similarity=0.338 Sum_probs=104.2
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccc-cc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI-NM 155 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI-~H 155 (226)
.+.+||++|+++|++++++| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~-~~~~~~~~---nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 95 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPIN-CTIDVHPS---NIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKH 95 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTT-EEEEECTT---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCC-eEEEeccc---cccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCC
Confidence 47899999999999999888 88877544 799999999999999999999999999999999999999999997 99
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccc
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQV 205 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~ 205 (226)
|||+ .+|+||++ +|+ +.|+|+++ |++||++|++||.++.
T Consensus 96 Pnv~-~~G~ICl~---iL~----~~WsP~~t---i~~vL~si~sll~~p~ 134 (136)
T 2h2y_A 96 THVY-SNGDICLS---VLG----DDYNPSLS---ISGLILSIISMLSSAK 134 (136)
T ss_dssp TTBC-TTCCBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHSSSC
T ss_pred CcCC-CCCEEECc---ccc----CCCCCCCc---HHHHHHHHHHHHhCcC
Confidence 9999 89999954 665 47999876 9999999999999984
No 10
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=8.3e-35 Score=242.22 Aligned_cols=123 Identities=58% Similarity=1.014 Sum_probs=108.4
Q ss_pred CCccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccc
Q psy15032 74 SVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153 (226)
Q Consensus 74 ~~~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI 153 (226)
+.++|.+||++||++|++++++|.+++.+.++++.|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 32 v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 111 (170)
T 2hlw_A 32 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111 (170)
T ss_dssp CCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCC
T ss_pred ccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccc
Confidence 45789999999999999998888778877555433599999999999999999999999999999999999999999999
Q ss_pred ccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcc
Q psy15032 154 NMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQ 204 (226)
Q Consensus 154 ~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~ 204 (226)
|||||+..+|+||+++|..+ +.|+|+++ |++||++|++||.++
T Consensus 112 ~HPNV~~~~G~ICl~iL~~~-----~~WsP~~t---i~~vL~sI~~ll~~~ 154 (170)
T 2hlw_A 112 NMNGVNSSNGVVDPRAISVL-----AKWQNSYS---IKVVLQELRRLMMSK 154 (170)
T ss_dssp CCSSBCSSSCBBCTTTCHHH-----HTCCSSCC---HHHHHHHHHHHHHST
T ss_pred ccCCEeCCCCEEEhhhcCCC-----CCCCccCc---HHHHHHHHHHHHccC
Confidence 99999867999996644443 36999875 999999999999874
No 11
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-35 Score=240.21 Aligned_cols=129 Identities=21% Similarity=0.320 Sum_probs=113.1
Q ss_pred cCCccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecc
Q psy15032 73 FSVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSR 152 (226)
Q Consensus 73 ~~~~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~Tp 152 (226)
.+...+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 5 ~~~~~~~~RL~kEl~~l~~~~~~~-i~~~p~~~---~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (156)
T 2e2c_A 5 KERHSVSKRLQQELRTLLMSGDPG-ITAFPDGD---NLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTP 80 (156)
T ss_dssp CSCCCHHHHHHHHHHHHHHHCCTT-EEEEESSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccchHHHHHHHHHHHHHHhCCCCC-EEEEECCC---CccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCC
Confidence 334468899999999999988888 88877654 79999999999999999999999999999999999999999999
Q ss_pred cccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcccC
Q psy15032 153 INMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLSG 218 (226)
Q Consensus 153 I~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~~ 218 (226)
+|||||+ .+|+||++ +|. +.|+|+++ |.+||++|++||.+++. ++|+++..+.
T Consensus 81 i~HPnv~-~~G~iCl~---iL~----~~W~p~~~---i~~vL~si~~ll~~pn~--~~p~n~~aa~ 133 (156)
T 2e2c_A 81 CWHPNVD-QSGNICLD---ILK----ENWTASYD---VRTILLSLQSLLGEPNN--ASPLNAQAAD 133 (156)
T ss_dssp CCBTTBC-TTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHTTSCCC--SSCSCHHHHH
T ss_pred cccCCCc-cCceEECc---ccc----ccCCCCCc---HHHHHHHHHHHHhCCCC--CCHHHHHHHH
Confidence 9999999 79999954 665 47999875 99999999999999854 6777765543
No 12
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-34 Score=238.93 Aligned_cols=130 Identities=24% Similarity=0.339 Sum_probs=113.4
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEecCC--CCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccc
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGLEND--DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~~~~--d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI 153 (226)
+.+.+||++|+++|++++++| +++.+.++ ++.|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|+|
T Consensus 9 ~~~~~RL~kEl~~l~~~~p~g-i~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 9 SLCKTRLQEERKQWRRDHPFG-FYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp CHHHHHHHHHHHHHHHSCCTT-CEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHHhCCCCC-EEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 468899999999999999999 67777643 233799999999999999999999999999999999999999999999
Q ss_pred ccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 154 NMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 154 ~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|||||+ .+|+||++ +|.. .+.|+|+++ |++||++|++||.+++. ++|+++..+
T Consensus 88 ~HPnV~-~~G~iCl~---iL~~--~~~W~p~~t---i~~vL~~i~~ll~~P~~--~~p~n~~aa 140 (163)
T 3rcz_B 88 FHPNVY-PSGTVCLS---ILNE--EEGWKPAIT---IKQILLGIQDLLDDPNI--ASPAQTEAY 140 (163)
T ss_dssp CSTTBC-TTSBBCCG---GGCT--TTTCCTTCC---HHHHHHHHHHHHTSCCT--TSCSCHHHH
T ss_pred ccCCCC-CCCcEecc---ccCC--CCCcCCcCc---HHHHHHHHHHHHhCCCC--CCccCHHHH
Confidence 999999 89999955 6663 346999875 99999999999999854 677776544
No 13
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.2e-34 Score=236.25 Aligned_cols=124 Identities=23% Similarity=0.438 Sum_probs=110.8
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~-i~~~p~~~---nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 79 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCN-CSAGPVGD---DIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHP 79 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEESSS---CTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEEcCC---CceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccc
Confidence 47899999999999999888 88888664 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+ .+|+||++ +|. +.|+|+++ |++||++|++||.+++. ++|+++..+
T Consensus 80 nv~-~~G~iCl~---iL~----~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~aa 127 (151)
T 4gpr_A 80 NIN-KNGVICLD---ILK----DQWSPALT---LSRVLLSISSLLTDPNP--SDPLDPEVA 127 (151)
T ss_dssp TBC-TTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHCCCT--TSCSSHHHH
T ss_pred eEC-CCCEEEcc---ccc----CCCCCCCc---HHHHHHHHHHHhcCCCC--CCchhHHHH
Confidence 999 89999954 665 47999876 99999999999999854 567665443
No 14
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-34 Score=239.68 Aligned_cols=123 Identities=25% Similarity=0.463 Sum_probs=110.2
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 21 ~~~~RL~kEl~~l~~~~~~g-i~~~~~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 96 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTN-CSAGPVGD---DMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHP 96 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTT-EEEEECSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEEcCC---CcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCC
Confidence 47899999999999998888 88887654 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
||+ .+|+||++ +|. +.|+|+++ |.+||++|++||.+++. ++|+++..
T Consensus 97 NI~-~~G~ICL~---iL~----~~WsP~~t---i~~vL~sI~sll~~pn~--~~Pln~~a 143 (166)
T 2ayv_A 97 NIN-SQGAICLD---ILK----DQWSPALT---ISKVLLSISSLLTDPNP--DDPLVPEI 143 (166)
T ss_dssp TBC-TTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHH
T ss_pred cCC-CCCeEEcc---ccc----ccCCCCCc---HHHHHHHHHHHHhCCCC--CchhhHHH
Confidence 999 89999954 666 47999875 99999999999999853 66666544
No 15
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.7e-34 Score=235.02 Aligned_cols=122 Identities=25% Similarity=0.398 Sum_probs=108.8
Q ss_pred HHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccccee
Q psy15032 79 NFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTCI 158 (226)
Q Consensus 79 ~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPNV 158 (226)
.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 3 ~~RL~kEl~~l~~~~~~~-i~~~~~~~---~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 78 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPG-IMAVPVPE---NYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNI 78 (149)
T ss_dssp CHHHHHHHHHHHHSCCTT-EEEEEETT---EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEECCC---cccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCC
Confidence 489999999999998888 88887654 79999999999999999999999999999999999999999999999999
Q ss_pred eCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 159 NNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 159 ~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
+ .+|+||++ +|. +.|+|+++ |.+||.+|++||.+++. +.|+++..+
T Consensus 79 ~-~~G~iCl~---iL~----~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~aa 124 (149)
T 2r0j_A 79 D-KLGRICLD---ILK----DKWSPALQ---IRTVLLSIQALLSSPEP--DDPLDSKVA 124 (149)
T ss_dssp C-TTCBBCCG---GGT----TTCCTTSC---HHHHHHHHHHHHHSCCT--TSCSSCHHH
T ss_pred C-CCCEEech---hcC----CCCCCCCc---HHHHHHHHHHHHhCCCC--CCchhHHHH
Confidence 9 89999954 665 47999876 99999999999999854 567666443
No 16
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-34 Score=237.44 Aligned_cols=123 Identities=19% Similarity=0.324 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccce
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTC 157 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPN 157 (226)
+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 6 ~~~RL~kEl~~l~~~~~~~-i~~~~~~~---~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPG-IKAEPDES---NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTT-EEEEECSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEECCC---chheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 4699999999999998888 88887655 7999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 158 INNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 158 V~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|+ .+|+||+ ++|. +.|+|+++ |.+||++|++||.+++. ++|+++..+
T Consensus 82 v~-~~G~iCl---~iL~----~~W~p~~~---i~~vl~~i~~ll~~pn~--~~p~n~~aa 128 (154)
T 2c2v_B 82 VD-KLGRICL---DILK----DKWSPALQ---IRTVLLSIQALLSAPNP--DDPLANDVA 128 (154)
T ss_dssp BC-TTCBBCC---HHHH----TSCCTTCC---HHHHHHHHHHHTTSCCC--CCC--CHHH
T ss_pred Cc-cCCeEEc---hhcc----CCCCCCCc---HHHHHHHHHHHHhCCCC--CCcccHHHH
Confidence 99 8999995 4665 47999776 99999999999999854 567666443
No 17
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.5e-34 Score=236.74 Aligned_cols=123 Identities=24% Similarity=0.392 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccce
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTC 157 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPN 157 (226)
+.+||++|+++|++++++| +++.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 6 ~~~RL~kE~~~l~~~~~~~-i~~~~~~~---~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (155)
T 1jat_A 6 LPKRIIKETEKLVSDPVPG-ITAEPHDD---NLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPN 81 (155)
T ss_dssp CCHHHHHHHHHHHHSCCTT-EEEEEETT---EEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEECCC---chhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCC
Confidence 5699999999999998888 88887654 7999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 158 INNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 158 V~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|+ .+|+||++ +|. +.|+|+++ |.+||.+|++||.+++. +.|.++..+
T Consensus 82 v~-~~G~iCl~---iL~----~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~aa 128 (155)
T 1jat_A 82 ID-RLGRICLD---VLK----TNWSPALQ---IRTVLLSIQALLASPNP--NDPLANDVA 128 (155)
T ss_dssp BC-TTCCBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSTTCCTTH
T ss_pred CC-CCCEEEch---hhc----cCCCCCCC---HHHHHHHHHHHHhCCCC--CCcccHHHH
Confidence 99 99999954 665 47999876 99999999999999853 667776544
No 18
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=8.2e-35 Score=236.70 Aligned_cols=125 Identities=19% Similarity=0.422 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccce
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTC 157 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPN 157 (226)
+.+||++|+++|++++++| +++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~-i~~~~~~~~--~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAH-ITLEFVSES--DIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGC-CEEEESSSS--CSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHhCCCCC-EEEEECCCC--CceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCC
Confidence 5799999999999998888 888887653 6999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 158 INNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 158 V~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|+..+|+||+ ++|. +.|+|+++ |.+||++|++||.+++. +.|+++..+
T Consensus 79 i~~~~G~iCl---~iL~----~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~aa 126 (149)
T 1fxt_A 79 ISSVTGAICL---DILK----NAWSPVIT---LKSALISLQALLQSPEP--NDPQDAEVA 126 (149)
T ss_dssp BCSSSCCBCC---HHHH----TSCCTTCC---HHHHHHHHHHHHHSCCS--SSCSSHHHH
T ss_pred CcCCCCeEeC---CcCC----CCCCCCCc---HHHHHHHHHHHHhCCCC--CCcccHHHH
Confidence 9933999995 5676 47999875 99999999999999854 567665543
No 19
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-34 Score=239.97 Aligned_cols=123 Identities=22% Similarity=0.434 Sum_probs=109.5
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++||++|++++++| +.+.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+||||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~g-i~~~p~~~---nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 4 PARRRLMRDFKRMKEDAPPG-VSASPLPD---NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEEETT---EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEecCC---ccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 46899999999999999888 78877654 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
||+ .+|+||+ ++|. +.|+|+++ |.+||++|++||.+++. +.|+++..
T Consensus 80 NI~-~~G~ICl---~iL~----~~WsP~~~---i~~vL~si~~ll~~Pn~--~~P~n~~a 126 (169)
T 1ayz_A 80 NVY-ANGEICL---DILQ----NRWTPTYD---VASILTSIQSLFNDPNP--ASPANVEA 126 (169)
T ss_dssp TBC-TTSBBCC---GGGT----TTCCTTCC---HHHHHHHHHHHHTCCCC--SSCSSHHH
T ss_pred CCC-CCCeEee---hhhc----cCCCCcCc---HHHHHHHHHHHHhCCCC--CcHHHHHH
Confidence 999 7999995 5676 47999876 99999999999999853 55665543
No 20
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.9e-34 Score=242.19 Aligned_cols=129 Identities=23% Similarity=0.339 Sum_probs=110.7
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.|||++||++|++++++| +++.+.+++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 7 ~a~kRL~kEl~~l~~~~~~g-i~~~~~~~~--nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 83 (183)
T 3rz3_A 7 SSQKALLLELKGLQEEPVEG-FRVTLVDEG--DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHP 83 (183)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEECTTC--CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEecCcc--chhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccC
Confidence 47899999999999999998 888755443 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhccccc---------CCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAK---------ATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~---------~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+ .+|+||+ ++|..|. .+.|+|+++ |++||++|++||.+|+. +.|++...+
T Consensus 84 nV~-~~G~iCl---siL~~~~~~~~~~~~~~~~W~p~~~---i~~vL~si~~ll~~Pn~--~~p~n~~aa 144 (183)
T 3rz3_A 84 NIY-ETGDVCI---SILHPPVDDPQSGELPSERWNPTQN---VRTILLSVISLLNEPNT--FSPANVDAS 144 (183)
T ss_dssp TBC-TTSBBCC---TTC--------------CCCCTTCC---HHHHHHHHHHHHHSCCC--SSCSSHHHH
T ss_pred CCC-CCCcEeh---hhcCcccccccccccccCCCCCcCc---HHHHHHHHHHHHhCCCC--CCcccHHHH
Confidence 999 7999995 5676432 368999876 99999999999999854 567766544
No 21
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2e-34 Score=234.70 Aligned_cols=122 Identities=30% Similarity=0.534 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccce
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTC 157 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPN 157 (226)
+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~~~RL~kEl~~l~~~~~~~-~~~~~~~~---~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQ-CSAGPVGD---DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSS-EEEEEETT---EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEECCC---cceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 6799999999999998888 88887664 7999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 158 INNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 158 V~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
|+ .+|+||++ +|. +.|+|+++ |.+||++|++||.+++. +.|+++..
T Consensus 81 v~-~~G~iCl~---iL~----~~W~p~~~---i~~vl~~i~~ll~~pn~--~~p~n~~a 126 (150)
T 1z2u_A 81 IN-SNGSICLD---ILR----SQWSPALT---ISKVLLSICSLLCDPNP--DDPLVPEI 126 (150)
T ss_dssp BC-TTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHH
T ss_pred CC-CCCeEeec---ccc----CCCCCCCC---HHHHHHHHHHHhhCCCC--CCccCHHH
Confidence 99 89999954 665 47999875 99999999999999854 56666543
No 22
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=3.4e-34 Score=235.17 Aligned_cols=129 Identities=21% Similarity=0.281 Sum_probs=111.7
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCC--CCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLEND--DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRIN 154 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~--d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~ 154 (226)
.+.+||++|+++|++++++| +.+.+.++ ++.|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 4 ~a~~RL~kE~~~l~~~~~~g-~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 82 (157)
T 2gjd_A 4 LCLQRLQEERKKWRKDHPFG-FYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFY 82 (157)
T ss_dssp HHHHHHHHHHHHHHHCCCTT-CEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCC
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCc
Confidence 36799999999999999998 77766542 2237999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 155 MTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 155 HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||||+ .+|+||+ ++|+. .+.|+|+++ |++||++|++||.+++ .++|+++..+
T Consensus 83 HPnv~-~~G~iCl---~iL~~--~~~W~p~~~---i~~vl~~i~~ll~~p~--~~~p~n~~aa 134 (157)
T 2gjd_A 83 HPNVY-PSGTICL---SILNE--DQDWRPAIT---LKQIVLGVQDLLDSPN--PNSPAQEPAW 134 (157)
T ss_dssp CTTBC-TTSBBCC---GGGCT--TTTCCTTCC---HHHHHHHHHHHHTSCC--TTCCCCHHHH
T ss_pred cCCCC-CCCcEee---ecccC--CCCCCCCCc---HHHHHHHHHHHHhCCC--CCCccCHHHH
Confidence 99999 8999994 57764 247999875 9999999999999884 4677776543
No 23
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.8e-34 Score=237.72 Aligned_cols=123 Identities=28% Similarity=0.495 Sum_probs=110.0
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++|+++|++++++| +++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 19 ~~~~RL~kEl~~l~~~~~~g-i~~~p~~~---nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HP 94 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQ-CSAGPVGD---DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 94 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTT-EEEEESSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEEcCC---CcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCC
Confidence 47899999999999998888 88887654 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
||+ .+|+||++ +|. +.|+|+++ |.+||.+|++||.+++. +.|+++..
T Consensus 95 nV~-~~G~ICl~---iL~----~~W~P~~t---i~~vL~si~~ll~~pn~--~~P~n~~a 141 (165)
T 2c4o_A 95 NIN-SNGSICLD---ILR----SQWSPALT---ISKVLLSICSLLCDPNP--DDPLVPEI 141 (165)
T ss_dssp TBC-TTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSSHHH
T ss_pred cCC-CCCeEeeh---hhc----CCCCCcCc---HHHHHHHHHHHHhCCCC--CccccHHH
Confidence 999 89999954 666 47999875 99999999999999853 56666543
No 24
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-34 Score=236.43 Aligned_cols=124 Identities=20% Similarity=0.303 Sum_probs=109.9
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccc
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINM 155 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~H 155 (226)
..+.+||++|+++|++++++| +.+.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||
T Consensus 12 ~~~~~RL~kEl~~l~~~~~~g-i~~~~~~~---~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 87 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTADPPDG-IKVFPNEE---DLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFH 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCCTT-EEEEECSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCC-EEEEECCC---ChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCccc
Confidence 347899999999999999888 88887544 79999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
|||+ .+|+|| |++|. +.|+|+++ |.+||.+|++||.+++. +.|+++..
T Consensus 88 Pnv~-~~G~iC---l~iL~----~~W~p~~~---i~~vL~~i~~ll~~pn~--~~p~n~~a 135 (158)
T 1zdn_A 88 PNVG-ANGEIC---VNVLK----RDWTAELG---IRHVLLTIKCLLIHPNP--ESALNEEA 135 (158)
T ss_dssp TTBC-TTSBBC---HHHHT----TTCCTTCC---HHHHHHHHHHHHHSCCG--GGCSSHHH
T ss_pred CCCC-CCCEEe---hhhcC----CCCCCCCc---HHHHHHHHHHHHhCCCC--CCcccHHH
Confidence 9999 889999 55676 47999875 99999999999999855 55666543
No 25
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.6e-34 Score=248.77 Aligned_cols=133 Identities=24% Similarity=0.387 Sum_probs=112.9
Q ss_pred ccccccCCccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCee
Q psy15032 68 CYLKLFSVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQC 147 (226)
Q Consensus 68 ~~~~s~~~~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V 147 (226)
..+.......+.+||++||++|++++++| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 14 ~~~~~~~~s~a~~RL~kEl~~l~~~~~~g-i~~~p~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V 89 (216)
T 2pwq_A 14 RENLYFQGSKELLRLQKELKDIENENVQE-IDAHIKDS---NFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKI 89 (216)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHSCTTT-EEEEECSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEE
T ss_pred hhccccccCHHHHHHHHHHHHHHhCCCCC-EEEEEcCC---ccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcc
Confidence 33334444568899999999999999888 88888765 799999999999999999999999999999999999999
Q ss_pred eeecccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 148 RFVSRINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 148 ~F~TpI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
+|.|+||||||+..+|+||+ ++|.+ .|+|+++ |.+||++|++||.+|+. ++|+++..
T Consensus 90 ~F~T~i~HPNI~~~~G~ICL---~iL~~----~WsP~~t---i~~VL~sI~sLL~~Pnp--~dPln~ea 146 (216)
T 2pwq_A 90 KFVTKIWHPNISSQTGAICL---DVLKN----EWSPALT---IRTALLSIQALLSDPQP--DDPQDAEV 146 (216)
T ss_dssp EESSCCCBTTBCTTTCBBCC---HHHHH----HCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHH
T ss_pred cccCCCcCCCCcCCCCEEEc---hhhcc----cCCCCCc---HHHHHHHHHHHHhCCCC--CCcccHHH
Confidence 99999999999956899994 56764 6999875 99999999999999854 56666543
No 26
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.8e-34 Score=234.27 Aligned_cols=123 Identities=22% Similarity=0.440 Sum_probs=109.5
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++|+++|++++++| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 4 ~a~~RL~~E~~~l~~~~~~~-i~~~~~~~---~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 4 PARKRLMRDFKRLQQDPPAG-ISGAPQDN---NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEEETT---EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEeCCC---CccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 47899999999999999888 78777654 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
||+ .+|+||+ ++|. +.|+|+++ |.+||.+|++||.+++. +.|+++..
T Consensus 80 nv~-~~G~iCl---~iL~----~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~a 126 (152)
T 2aak_A 80 NIY-ADGSICL---DILQ----NQWSPIYD---VAAILTSIQSLLCDPNP--NSPANSEA 126 (152)
T ss_dssp TBC-TTSBBCC---GGGT----TSCCTTCC---HHHHHHHHHHHHTSCCT--TSCSSHHH
T ss_pred CCC-CCCEEec---hhhc----CCCCCCCc---HHHHHHHHHHHHhCCCC--CccccHHH
Confidence 999 7999995 4665 47999876 99999999999999843 56666543
No 27
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=2.9e-34 Score=236.48 Aligned_cols=129 Identities=22% Similarity=0.330 Sum_probs=111.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecC--CCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLEN--DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRIN 154 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~--~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~ 154 (226)
.+.+||++|+++|++++++| +.+.+.. +++.|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g-~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 85 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFG-FVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLF 85 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-CEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcc
Confidence 46899999999999999988 6666653 22238999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 155 MTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 155 HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||||+ .+|+||+ ++|.. .+.|+|+++ |.+||.+|++||.+++. ++|+++..+
T Consensus 86 HPnv~-~~G~iCl---~iL~~--~~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~aa 137 (161)
T 2grr_A 86 HPNVY-PSGTVCL---SILEE--DKDWRPAIT---IKQILLGIQELLNEPNI--QSPAQAEAY 137 (161)
T ss_dssp STTBC-TTSBBCC---GGGCT--TTTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHHH
T ss_pred cCCCC-CCCeEee---hhcCC--CCCcCCCCc---HHHHHHHHHHHHhCCCC--CCccCHHHH
Confidence 99999 8999995 56663 357999875 99999999999999854 677776543
No 28
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-34 Score=239.44 Aligned_cols=128 Identities=13% Similarity=0.225 Sum_probs=111.3
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccc
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINM 155 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~H 155 (226)
..+.+||++|+++|++++++| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 22 ~~a~~RL~kEl~~l~~~~~~g-i~~~p~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 97 (169)
T 1yrv_A 22 GRAYLLLHRDFCDLKENNYKG-ITAKPVSE---DMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFH 97 (169)
T ss_dssp CHHHHHHHHHHHHHHHHCCTT-EEEEECST---TSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCC-EEEEEcCC---ccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCcc
Confidence 357899999999999998888 78877655 79999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|||+..+|+||+ ++|.. .+.|+|+++ |++||++|++||.+++ .+.|+++..+
T Consensus 98 PNI~~~~G~ICL---~iL~~--~~~WsP~~t---i~~vL~sI~sll~~Pn--~~~Pln~eaa 149 (169)
T 1yrv_A 98 PNVDPHTGQPCI---DFLDN--PEKWNTNYT---LSSILLALQVMLSNPV--LENPVNLEAA 149 (169)
T ss_dssp TTBCTTTCCBCC---HHHHC--GGGCCTTCC---HHHHHHHHHHHHTSCC--TTSCSCHHHH
T ss_pred CcccCCCCeEee---hhhcC--CcCCCCcCC---HHHHHHHHHHHHhCCC--CCCchhHHHH
Confidence 999339999995 56652 247999876 9999999999999985 3667766543
No 29
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-34 Score=239.36 Aligned_cols=126 Identities=25% Similarity=0.342 Sum_probs=111.1
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccc
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINM 155 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~H 155 (226)
..+.+||++||++|++++++| +++.+.++ |+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+|||
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~g-i~~~p~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 104 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKG-ISAFPESD---NLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYH 104 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTT-EEEEEETT---EEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred hHHHHHHHHHHHHHHhCCCCC-EEEEEcCC---cccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCcc
Confidence 457899999999999998888 88877654 79999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcccC
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLSG 218 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~~ 218 (226)
|||+ .+|+||++ +|. +.|+|+++ |.+||++|++||.+++. +.|+++..+.
T Consensus 105 PNV~-~~G~ICL~---iL~----~~WsP~~t---i~~vL~sI~sll~~Pn~--~~Pln~~aa~ 154 (179)
T 1i7k_A 105 PNVD-TQGNISLD---ILK----EKWSALYD---VRTILLSIQSLLGEPNI--DSPLNTHAAE 154 (179)
T ss_dssp TTBC-TTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHHHH
T ss_pred Cccc-cCCeEEcc---cCc----CcCCCCCC---HHHHHHHHHHHHhCCCC--cchhhHHHHH
Confidence 9999 79999955 665 47999876 99999999999999854 6677665443
No 30
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=6.6e-34 Score=235.32 Aligned_cols=131 Identities=15% Similarity=0.203 Sum_probs=112.1
Q ss_pred CCccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccc
Q psy15032 74 SVVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153 (226)
Q Consensus 74 ~~~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI 153 (226)
....+.+||++||++|++++++| +++.+.+++ |++.|.++| ||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 11 ~~s~~~~RL~kEl~~l~~~~~~g-i~~~~~~~~--~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 86 (167)
T 3fn1_B 11 RVSVRDKLLVKEVAELEANLPCT-CKVHFPDPN--KLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKI 86 (167)
T ss_dssp CCCHHHHHHHHHHHHHGGGSCTT-EEEECSSSS--CTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCC
T ss_pred chhHHHHHHHHHHHHHHhCCCCC-EEEEeCCCC--cceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCc
Confidence 44569999999999999999988 888766544 799999998 89999999999999999999999999999999999
Q ss_pred ccceeeCCCCeEEccchhhcccc--cCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 154 NMTCINNTSGIVVVIMFWVMIEA--KATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 154 ~HPNV~~~~G~ICl~~LsiL~~w--~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
|||||+ .+|+|| |++|..| .++.|+|+++ |.+||++|++||.++.+ .+.|.++..
T Consensus 87 ~HPnv~-~~G~iC---l~iL~~~~~~~~~W~p~~~---i~~vl~~i~~ll~~~pn-~~~p~n~ea 143 (167)
T 3fn1_B 87 WHPNIT-ETGEIC---LSLLREHSIDGTGWAPTRT---LKDVVWGLNSLFTDLLN-FDDPLNIEA 143 (167)
T ss_dssp CCSSBC-TTCCBC---CGGGSBCSSSTTSBCTTCC---HHHHHHHHHHTTTTTCC-SSSCSCHHH
T ss_pred ccCCCC-CCCEEe---chhhccCCCCCCCCCCcCc---HHHHHHHHHHHHcCCCC-CCcchhHHH
Confidence 999999 899999 5577764 3457999876 99999999999999422 355665543
No 31
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1e-33 Score=232.62 Aligned_cols=125 Identities=25% Similarity=0.441 Sum_probs=109.1
Q ss_pred cHHHHHHHHHHHhHcC---CCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccc
Q psy15032 77 PRNFRLLEELEHGQRG---VGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~---~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI 153 (226)
.+.+||++|+++|+++ ++.| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 8 ~a~~RL~kEl~~l~~~~~~~~~~-i~~~~~~~---~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 8 IAVQRIKREFKEVLKSEETSKNQ-IKVDLVDE---NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTS-EEEEECSS---SSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCC-EEEEeCCC---chheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 4789999999999985 3556 88888665 699999999999999999999999999999999999999999999
Q ss_pred ccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 154 NMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 154 ~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|||||+..+|+||+ ++|. +.|+|+++ |.+||++|++||.+++. +.|+++..+
T Consensus 84 ~HPni~~~~G~iCl---~iL~----~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~aa 135 (159)
T 2bep_A 84 WHPNISSVTGAICL---DILK----DQWAAAMT---LRTVLLSLQALLAAAEP--DDPQDAVVA 135 (159)
T ss_dssp CBTTBCTTTCBBCC---GGGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHHH
T ss_pred CccCCCCCCCEEeC---hhhh----ccCCCCCc---HHHHHHHHHHHHhCCCC--CCcccHHHH
Confidence 99999955999995 4666 47999875 99999999999999853 667766543
No 32
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=8.5e-34 Score=240.48 Aligned_cols=125 Identities=26% Similarity=0.472 Sum_probs=108.0
Q ss_pred cHHHHHHHHHHHhHcCCC-------------CCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCC
Q psy15032 77 PRNFRLLEELEHGQRGVG-------------DGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDE 143 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~-------------~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~ 143 (226)
.+.+||++||++|+++++ .| +.+.+.++ |+++|+++|.||++|||+||.|+|+|.||++||++
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~g-i~v~~~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~ 107 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHG-VSAQIVGG---DIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYN 107 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------C-EEEEEETT---EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTS
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCc-EEEEEcCC---CcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCC
Confidence 478999999999999876 45 88887765 79999999999999999999999999999999999
Q ss_pred CCeeeeecccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 144 PPQCRFVSRINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 144 PP~V~F~TpI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+|+|.|+||||||+..+|+||+ ++|. +.|+|+++ |++||++|++||.+++. ++|+++..+
T Consensus 108 PP~V~F~T~i~HPNI~~~~G~ICL---~iL~----~~WsP~~t---i~~vL~sI~sll~~pnp--~~P~n~~aa 169 (193)
T 2f4z_A 108 PPKMKFVTKIWHPNISSQTGAICL---DILK----HEWSPALT---IRTALLSIQAMLADPVP--TDPQDAEVA 169 (193)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCC---GGGT----TTCCTTSC---HHHHHHHHHHHHHSCCT--TSCSCHHHH
T ss_pred CCeEEEecCCccCCCcCCCCEEEC---cccc----ccCCCCCC---HHHHHHHHHHHHhCCCC--CCcccHHHH
Confidence 999999999999999966999995 4676 37999876 99999999999999854 667665443
No 33
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-33 Score=225.47 Aligned_cols=108 Identities=22% Similarity=0.382 Sum_probs=97.5
Q ss_pred HHHHHHHHHhHcCCCCCcEEEE--ecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccc--c
Q psy15032 80 FRLLEELEHGQRGVGDGTISWG--LENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRIN--M 155 (226)
Q Consensus 80 rRL~kEL~~L~~~~~~g~is~~--~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~--H 155 (226)
+||++|+++|++++++| +++. +.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++| |
T Consensus 25 ~RL~kEl~~l~~~~~~g-i~v~~~~~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~H 100 (136)
T 2a7l_A 25 KRLQKELLALQNDPPPG-MTLNEKSVQN---SITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVH 100 (136)
T ss_dssp HHHHHHHHHHHHSCCTT-CCCCTTCCCC---SCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCB
T ss_pred HHHHHHHHHHHhCCCCC-EEEEEeeCcc---ccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCC
Confidence 99999999999999888 6643 3333 7999999999999999999999999999999999999999999999 9
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHh
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIR 202 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~ 202 (226)
|||+ .+|+||++ +|+ +.|+|+++ |++||++|++||.
T Consensus 101 PNV~-~~G~ICL~---iL~----~~WsP~~t---i~~vL~sI~slL~ 136 (136)
T 2a7l_A 101 PHVY-SNGHICLS---ILT----EDWSPALS---VQSVCLSIISMLS 136 (136)
T ss_dssp TTBC-TTCBBCCG---GGT----TTCCTTSC---HHHHHHHHHHHTC
T ss_pred ccCC-CCCeEEch---hcC----CCCCCCCc---HHHHHHHHHHHhC
Confidence 9999 89999955 665 47999886 9999999999984
No 34
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=2.7e-33 Score=237.57 Aligned_cols=123 Identities=26% Similarity=0.477 Sum_probs=109.8
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++||++|++++++| +.+.+.++ |+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+||||
T Consensus 48 ~a~~RL~kEl~~l~~~~~~g-i~~~p~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 123 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPN-CSAGPKGD---NIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHC 123 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEESSS---CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-ceeecccC---ccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccc
Confidence 47899999999999998888 88887654 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
||+ .+|+|||+ +|. +.|+|+++ |.+||++|++||.+++. +.|+++..
T Consensus 124 NV~-~~G~ICL~---iL~----~~WsP~~t---i~~vL~sI~~ll~~pnp--~~Pln~~a 170 (194)
T 3bzh_A 124 NIN-SQGVICLD---ILK----DNWSPALT---ISKVLLSICSLLTDCNP--ADPLVGSI 170 (194)
T ss_dssp TBC-TTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHH
T ss_pred eEC-CCCceech---hhh----ccCCCcCc---HHHHHHHHHHHHhCCCC--ccchhHHH
Confidence 999 89999955 665 47999875 99999999999999853 56666544
No 35
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.5e-33 Score=229.32 Aligned_cols=123 Identities=21% Similarity=0.407 Sum_probs=107.1
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEE-EecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISW-GLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINM 155 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~-~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~H 155 (226)
.+.+||++|+++|++++++| +.+ .+.++ |+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~-i~~~~~~~~---~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPY-LRNLSSDDA---NVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTT-EEEEEECSS---CTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHhCCCCC-EEEEecCCC---chheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 36799999999999999888 777 54443 7999999999 999999999999999999999999999999999999
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
|||+ .+|+||+ ++|+ .+.|+|+++ |.+||.+|++||.+++. +.|+++..
T Consensus 79 PnV~-~~G~iCl---~iL~---~~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~a 127 (155)
T 1wzv_A 79 PNVD-ENGQICL---PIIS---SENWKPCTK---TCQVLEALNVLVNRPNI--REPLRMDL 127 (155)
T ss_dssp TTBC-TTCBCCC---GGGC---TTTCCTTCC---HHHHHHHHHHHHHSCCS--SSCSSHHH
T ss_pred CcCC-CCCeEee---cCCC---ccCCCCCCc---HHHHHHHHHHHHhCCCC--CchHHHHH
Confidence 9999 7999995 4663 358999876 99999999999999854 56666544
No 36
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.7e-33 Score=237.30 Aligned_cols=124 Identities=25% Similarity=0.442 Sum_probs=108.5
Q ss_pred cHHHHHHHHHHHhHcCC---CCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccc
Q psy15032 77 PRNFRLLEELEHGQRGV---GDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRI 153 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~---~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI 153 (226)
.+.+||++|+++|+++. +.| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~-i~~~~~~~---nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 80 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQ-IKVDLVDE---NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 80 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTS-EEEEECST---TSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-EEEEECCC---CccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCc
Confidence 36799999999999873 456 88888765 799999999999999999999999999999999999999999999
Q ss_pred ccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 154 NMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 154 ~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
|||||+..+|+||++ +|. +.|+|+++ |.+||++|++||.+++. +.|.++..
T Consensus 81 ~HPnv~~~~G~iCl~---iL~----~~W~p~~~---i~~vL~~i~~ll~~p~p--~~p~n~~a 131 (201)
T 3k9o_A 81 WHPNISSVTGAICLD---ILK----DQWAAAMT---LRTVLLSLQALLAAAEP--DDPQDAVV 131 (201)
T ss_dssp CBTTBCTTTCBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHH
T ss_pred ccCCCcCCCCeeeCc---ccc----cCCCCCCC---HHHHHHHHHHHhcCCCC--CCcccHHH
Confidence 999999559999954 665 47999876 99999999999999854 56666543
No 37
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.1e-32 Score=229.52 Aligned_cols=128 Identities=23% Similarity=0.364 Sum_probs=107.3
Q ss_pred cHHHHHHHHHHHhHc-C-C------CC-C-cEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCe
Q psy15032 77 PRNFRLLEELEHGQR-G-V------GD-G-TISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQ 146 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~-~-~------~~-g-~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~ 146 (226)
.+.+||++||++|++ . + +. | .+.+.+.+++ |+++|+++|.||++|||+||.|+|+|.||++||++||+
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~--nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~ 83 (172)
T 2y9m_A 6 TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDET--DLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPK 83 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTT--CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCC--chhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCE
Confidence 478999999999998 4 2 32 3 3555553333 79999999999999999999999999999999999999
Q ss_pred eeeec-ccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 147 CRFVS-RINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 147 V~F~T-pI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|+|.| +||||||+..+|+||+ ++|. .+.|+|+++ |.+||++|++||.+++. +.|+++..+
T Consensus 84 v~f~t~~i~HPni~~~~G~iCl---~iL~---~~~W~p~~~---i~~vL~si~~ll~~p~~--~~p~n~~aa 144 (172)
T 2y9m_A 84 ISFMQNNILHCNVKSATGEICL---NILK---PEEWTPVWD---LLHCVHAVWRLLREPVC--DSPLDVDIG 144 (172)
T ss_dssp EEECTTSCCCTTEETTTTEECC---GGGS---TTTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSSHHHH
T ss_pred EEEeeCCeecCCCcCCCCEEec---cccC---CCCCCCcCc---HHHHHHHHHHHHhCCCC--CCccCHHHH
Confidence 99999 9999999757999995 4665 357999875 99999999999999844 677766544
No 38
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.98 E-value=2.6e-33 Score=228.93 Aligned_cols=124 Identities=25% Similarity=0.445 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccce
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTC 157 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPN 157 (226)
+.+||++|+++|++++++| +.+...+++ |+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~-~~~~~~~~~--~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKN-FRNIQVDEA--NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSS-CEEECSSCS--SSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEeeCCCC--chheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 5689999999999999888 554443333 7999999998 99999999999999999999999999999999999999
Q ss_pred eeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 158 INNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 158 V~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|+ .+|+||++ +|. .+.|+|+++ |.+||++|++||.+++. +.|.++..+
T Consensus 79 v~-~~G~iCl~---iL~---~~~W~p~~~---i~~vl~~i~~ll~~p~~--~~p~n~~aa 126 (154)
T 1c4z_D 79 ID-EKGQVCLP---VIS---AENWKPATK---TDQVIQSLIALVNDPQP--EHPLRADLA 126 (154)
T ss_dssp BC-TTCBBCCT---TTS---SSSCCTTCC---HHHHHHHHHHHHHSCCC--SSCSCHHHH
T ss_pred CC-CCCEEECC---CCC---CCCCCCCCc---HHHHHHHHHHHHcCCCC--CchhhHHHH
Confidence 99 89999955 665 357999876 99999999999999854 566666543
No 39
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=1.3e-32 Score=226.68 Aligned_cols=122 Identities=14% Similarity=0.280 Sum_probs=105.3
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++|+++| ++++| +++.+.+++ |+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 6 ~~~~RL~kEl~~l--~~~~~-~~~~~~~~~--~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (160)
T 1y8x_A 6 AAQLRIQKDINEL--NLPKT-CDISFSDPD--DLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 79 (160)
T ss_dssp HHHHHHHHHHHTC--CCCTT-EEEECSSTT--CTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHhc--CCCCC-eEEEeccCC--ccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccC
Confidence 4789999999999 45667 787743333 799999988 99999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+ .+|+||+ ++|. +.|+|+++ |.+||.+|++||.+|+. +.|+++..+
T Consensus 80 nv~-~~G~iCl---~iL~----~~W~p~~~---i~~vL~~i~~ll~~Pn~--~~p~n~~aa 127 (160)
T 1y8x_A 80 NID-LEGNVCL---NILR----EDWKPVLT---INSIIYGLQYLFLEPNP--EDPLNKEAA 127 (160)
T ss_dssp TBC-TTCBBCC---GGGT----TTCCTTCC---HHHHHHHHHHHHHSCCC--SSCSCHHHH
T ss_pred cCC-CCCeEEc---ccch----hhccCCCC---HHHHHHHHHHHHhCCCC--CCccCHHHH
Confidence 999 8999995 4665 47999875 99999999999999854 677776544
No 40
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.98 E-value=3.1e-33 Score=240.64 Aligned_cols=123 Identities=20% Similarity=0.424 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccce
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTC 157 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPN 157 (226)
+.+||++|+++|++++++| +++.+.+++ +++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 3 a~~RL~kEl~~l~~~~~~g-i~~~p~~~~--~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 79 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAH-ITLEFVSES--DIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 79 (215)
T ss_dssp THHHHHHHHHHHHTTTCTT-CEECCCSSS--SCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEECCCc--cccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCc
Confidence 6799999999999998888 888876653 5779999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCc
Q psy15032 158 INNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPY 215 (226)
Q Consensus 158 V~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~ 215 (226)
|+..+|+||++ +|. +.|+|+++ |.+||++|++||.+|+. +.|.++.
T Consensus 80 I~~~~G~ICL~---iL~----~~WsP~~t---i~~VL~sI~sLL~~Pnp--~~Pln~e 125 (215)
T 1tte_A 80 ISSVTGAICLD---ILR----NAWSPVIT---LKSALISLQALLQSPEP--NDPQDAE 125 (215)
T ss_dssp SCSSSSCCCSS---TTT----CCSCTTCC---HHHHHHHHHHHHTSCCC--SSCSCHH
T ss_pred CcCCCCEEECc---cCC----CCCCCcCc---HHHHHHHHHHHHhCCCC--CCccCHH
Confidence 99339999955 665 47999875 99999999999999854 4566554
No 41
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=2.4e-32 Score=229.12 Aligned_cols=123 Identities=14% Similarity=0.278 Sum_probs=105.9
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccc
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINM 155 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~H 155 (226)
..+.+||++||++| ++++| +++.+..++ |+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~-i~~~~p~~~--nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 98 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKT-CDISFSDPD--DLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 98 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTT-EEEECSSTT--CTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHhc--CCCCC-eEEEecccc--cccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCcc
Confidence 35789999999999 45667 887743333 799999998 9999999999999999999999999999999999999
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
|||+ .+|+||++ +|. +.|+|+++ |.+||.+|++||.+|+. +.|+++..+
T Consensus 99 PNV~-~~G~iCl~---iL~----~~W~p~~~---i~~vL~si~~ll~~Pn~--~~p~n~~aa 147 (180)
T 2nvu_C 99 PNID-LEGNVALN---ILR----EDWKPVLT---INSIIYGLQYLFLEPNP--EDPLNKEAA 147 (180)
T ss_dssp TTBC-TTSBBCCG---GGT----TSCCTTCC---HHHHHHHHHHHHHSCCT--TSCSSHHHH
T ss_pred CCCC-CCCcEEcc---ccc----ccCCCCCC---HHHHHHHHHHHHhCCCC--CCccCHHHH
Confidence 9999 89999954 665 47999876 99999999999999854 667776543
No 42
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.97 E-value=3.3e-32 Score=239.29 Aligned_cols=126 Identities=25% Similarity=0.432 Sum_probs=109.6
Q ss_pred CccHHHHHHHHHHHhHcC---CCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeec
Q psy15032 75 VVPRNFRLLEELEHGQRG---VGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVS 151 (226)
Q Consensus 75 ~~~r~rRL~kEL~~L~~~---~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~T 151 (226)
...+.+||++||++|+++ ++.| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~g-i~v~p~~d---nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 130 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQ-IKVDLVDE---NFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT 130 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTS-EEEEECST---TSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCC-EEEEECCC---cccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecC
Confidence 345789999999999987 3456 88888765 7999999999999999999999999999999999999999999
Q ss_pred ccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCcc
Q psy15032 152 RINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 152 pI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~ 216 (226)
+||||||+..+|+||++ +|. +.|+|+++ |.+||++|++||.+++. +.|.++..
T Consensus 131 ~i~HPNV~~~~G~ICL~---iL~----~~WsP~~t---i~~vL~sI~~ll~~pnp--~~Pln~ea 183 (253)
T 3e46_A 131 KIWHPNISSVTGAICLD---ILK----DQWAAAMT---LRTVLLSLQALLAAAEP--DDPQDAVV 183 (253)
T ss_dssp CCCBTTBCTTTCBBCCG---GGT----TCCCTTCC---HHHHHHHHHHHHHSCCT--TSCSCHHH
T ss_pred CCccCCccCCCCeeecc---ccc----CCCCCCCC---HHHHHHHHHHHhcCCCC--CChhhHHH
Confidence 99999999569999954 665 47999876 99999999999999854 56666543
No 43
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.97 E-value=6.3e-32 Score=220.79 Aligned_cols=119 Identities=18% Similarity=0.295 Sum_probs=102.8
Q ss_pred HHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccccee
Q psy15032 79 NFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTCI 158 (226)
Q Consensus 79 ~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPNV 158 (226)
.+||++|+++|++. | +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 4 ~~Rl~kEl~~l~~~---~-~~v~~~~~---~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 76 (152)
T 2onu_A 4 LTRKQCDFTKLIMA---G-YDLELNNG---STQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNV 76 (152)
T ss_dssp CCHHHHTHHHHHHH---T-CCEEEETT---EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred HHHHHHHHHhcCcC---C-CEEEEccC---ccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcC
Confidence 47999999999874 4 66666654 79999999999999999999999999999999999999999999999999
Q ss_pred eCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHH-HHHHHhccccCCCCCCCCcc
Q psy15032 159 NNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLI-VCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 159 ~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~-I~sLL~~~~~~~~~~~q~~~ 216 (226)
+..+|+|| |++|++ .|+|+++ |.+||.+ |++||.+|+. +.|+++..
T Consensus 77 ~~~~G~iC---l~il~~----~W~p~~~---i~~vl~~ii~~Ll~~Pn~--~~P~n~~a 123 (152)
T 2onu_A 77 DEASGSVC---LDVINQ----TWTPLYS---LVNVFEVFLPQLLTYPNP--SDPLNSDA 123 (152)
T ss_dssp CTTTCBBC---HHHHHH----HCCTTCC---HHHHHHTHHHHHHHSCCC--SSCSSHHH
T ss_pred cCcCCeEe---cccccc----cCCCCCC---HHHHHHHHHHHHHhCCCC--CCcccHHH
Confidence 95599999 557763 6999876 9999999 6899998854 56666543
No 44
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.97 E-value=6.6e-32 Score=224.80 Aligned_cols=122 Identities=20% Similarity=0.314 Sum_probs=102.4
Q ss_pred CccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccc
Q psy15032 75 VVPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRIN 154 (226)
Q Consensus 75 ~~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~ 154 (226)
.+.+.+||++|+++|++++. + + ..++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 10 ~~~~~~RL~~El~~l~~~~~-~-v---~~~~---~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 81 (171)
T 1yf9_A 10 NLRSNRRREMDYMRLCNSTR-K-V---YPSD---TVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRIL 81 (171)
T ss_dssp ---CCHHHHHHHHHHHSSSS-C-E---EECS---STTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred cccHHHHHHHHHHHHHhCCC-C-C---CCCC---CceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcc
Confidence 34567999999999999863 3 3 2232 7999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHH-HHHHhccccCCCCCCCCcc
Q psy15032 155 MTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIV-CVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 155 HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I-~sLL~~~~~~~~~~~q~~~ 216 (226)
||||+..+|+|| |++|.+ .|+|+++ |++||++| ++||.+++. ++|+++..
T Consensus 82 HPNi~~~~G~iC---l~iL~~----~W~p~~~---i~~vL~sil~~ll~~Pn~--~~p~n~~a 132 (171)
T 1yf9_A 82 HPNVDERSGSVC---LDVINQ----TWTPMYQ---LENIFDVFLPQLLRYPNP--SDPLNVQA 132 (171)
T ss_dssp BTTBCTTTCBBC---HHHHHH----HCCTTCC---THHHHHTHHHHHHHSCCS--SCCSCHHH
T ss_pred cccCcccCCeEe---cccccc----CCCCCCc---HHHHHHHHHHHHHhCCCC--CCcccHHH
Confidence 999995599999 557763 6999876 99999997 799998854 56766644
No 45
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=223.10 Aligned_cols=121 Identities=18% Similarity=0.308 Sum_probs=104.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.+||++||++|++ +| +++.+. + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 25 ~a~~RL~kEl~~l~~---~g-~~v~~~-d---dl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HP 96 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SK-HEVTIL-G---GLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHP 96 (179)
T ss_dssp HHHHHHHHHHHHHHH---SS-SCEEEE-E---ETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHhcCc---CC-CEEEEC-C---CCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccC
Confidence 478999999999985 35 666665 3 589999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHH-HHHHHhccccCCCCCCCCccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLI-VCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~-I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+..+|+|| |++|.+ .|+|+++ |++||++ |++||.+|+. ++|+++..+
T Consensus 97 NV~~~~G~IC---L~iL~~----~WsP~~t---i~~iL~s~I~~Ll~~Pn~--~~p~n~eaa 146 (179)
T 2z5d_A 97 NIDEASGTVC---LDVINQ----TWTALYD---LTNIFESFLPQLLAYPNP--IDPLNGDAA 146 (179)
T ss_dssp TBCTTTCBBC---HHHHHH----HCCTTCC---TTHHHHTHHHHHHHSCCC--SSCSCHHHH
T ss_pred cCCCCCCeEe---cccccc----CCCCCCC---HHHHHHHHHHHHHhCCCC--CCccCHHHH
Confidence 9993399999 556763 7999876 9999999 9999999854 667776543
No 46
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=236.46 Aligned_cols=132 Identities=18% Similarity=0.215 Sum_probs=110.9
Q ss_pred CCccHHHHHHHHHHHhHcCCCCCc---EEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeee
Q psy15032 74 SVVPRNFRLLEELEHGQRGVGDGT---ISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFV 150 (226)
Q Consensus 74 ~~~~r~rRL~kEL~~L~~~~~~g~---is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~ 150 (226)
....+.+||++|+++|++++++|. +.+.+.++ |++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ed---nl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEE---RLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESS---CTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeecccCC---CccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 344689999999999999888762 33444444 799999999999999999999999999999999999999999
Q ss_pred cc-----cccceeeCCCCeEEccchhhccccc---CCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCC
Q psy15032 151 SR-----INMTCINNTSGIVVVIMFWVMIEAK---ATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQP 214 (226)
Q Consensus 151 Tp-----I~HPNV~~~~G~ICl~~LsiL~~w~---~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~ 214 (226)
|+ +|||||+ .+|+|| |++|++|+ .+.|+|+++ ||.+||++|++||.++....+.|.++
T Consensus 150 T~~g~~~ifHPNV~-~~G~IC---LsiL~~~~g~~~e~WsPa~s--tI~~VLlsIqsLL~~~~Pn~~dP~~~ 215 (323)
T 3ceg_A 150 TTGGHSVRFNPNLY-NDGKVC---LSILNTWHGRPEEKWNPQTS--SFLQVLVSVQSLILVAEPYFNEPGYE 215 (323)
T ss_dssp CSTTTTCCCBTTBC-TTCBBC---CGGGTSSCCCGGGSCCTTTC--CHHHHHHHHHHHTSCSSGGGGSTTGG
T ss_pred ccCCCcccccCCCC-cCCeEe---chhhccccCCCcCCCCcCcC--CHHHHHHHHHHHHcCCCCCCCCccCH
Confidence 99 9999999 899999 56888886 368999873 59999999999997543334556554
No 47
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=1.6e-30 Score=219.28 Aligned_cols=117 Identities=13% Similarity=0.142 Sum_probs=98.9
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeeccccc
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINM 155 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~H 155 (226)
..+.+||++|+++|++++++| +.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~-i~~~p~~~---nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~ 86 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPY-ICAEPLPS---NILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--N 86 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTT-EEEEEETT---EEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--C
T ss_pred cHHHHHHHHHHHHHHhCCCCC-EEEEEcCC---ccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--C
Confidence 358899999999999999888 88877654 79999999999999999999999999999999999999999999 9
Q ss_pred ceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcccc
Q psy15032 156 TCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVD 206 (226)
Q Consensus 156 PNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~ 206 (226)
||++ .+|+||+ ++|+.| .+.|+|+++ |.+||.+|++||.+++.
T Consensus 87 ~~~~-~~G~ICL---~iL~~~-~~~W~P~~t---i~~vL~si~sll~~p~p 129 (187)
T 2f4w_A 87 GRFK-CNTRLCL---SITDFH-PDTWNPAWS---VSTILTGLLSFMVEKGP 129 (187)
T ss_dssp SSBC-TTSCBC--------------CCTTCC---HHHHHHHHHHHHHSCCC
T ss_pred ceec-cCCeEee---eccccC-ccCCCCcCc---HHHHHHHHHHHhcCCCC
Confidence 9999 8999995 567543 357999876 99999999999999843
No 48
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.97 E-value=6.4e-31 Score=243.94 Aligned_cols=124 Identities=27% Similarity=0.487 Sum_probs=111.1
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMT 156 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HP 156 (226)
.+.|||++|+++|++++++| +++.+.++ |++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~-~~~~p~~~---nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 78 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQ-CSAGPVGD---DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 78 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSS-EEEEEETT---EEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEEcCC---cceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccccc
Confidence 36899999999999999888 88887765 799999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 157 CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 157 NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
||+ .+|+||+ ++|. +.|+|+++ |.+||.+|++||.+|+. +.|+++..+
T Consensus 79 nv~-~~G~iCl---~il~----~~W~p~~~---i~~vL~~i~~ll~~pnp--~~p~n~~aa 126 (399)
T 4ddg_A 79 NIN-SNGSISL---DILR----SQWSPALT---ISKVLLSICSLLCDPNP--DDPLVPEIA 126 (399)
T ss_dssp TBC-TTCBBCC---GGGT----TSCCTTCC---HHHHHHHHHHHHHSCCT--TSCSSHHHH
T ss_pred ccC-CCCeEeC---cccc----cCCCcccc---HHHHHHHHHHHHcCCCC--CchhhHHHH
Confidence 999 8999995 4665 47999876 99999999999999855 567766443
No 49
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.97 E-value=3.9e-31 Score=218.96 Aligned_cols=125 Identities=19% Similarity=0.336 Sum_probs=105.0
Q ss_pred cHHHHHHHHHHHhHcCC------------CCCcEEEEecCCCCCCcceEEEEEeCCCCCCCC--CCeEEEEEEeCCCCCC
Q psy15032 77 PRNFRLLEELEHGQRGV------------GDGTISWGLENDDDMTLTHWTGMIIGPPRTPYE--NRMYSLKIECGPRYPD 142 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~------------~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYe--GG~f~~~I~fP~~YP~ 142 (226)
.+.|||++|+++|++++ +.+ +.+.+.++ |+++|+++|.||++|||+ ||.|+++|.||++||+
T Consensus 8 ~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~-i~~~~~~~---nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 8 ISNKRIIKDLKLLLEEVDANNEANSSGSPHST-AIFSVDTD---TIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTC----CCSSC-EEEEEEES---STTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred HHHHHHHHHHHHHHhCcccccccccccCCCCc-EEEEeCCC---cccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 35699999999999876 455 77776655 799999999999999999 9999999999999999
Q ss_pred CCCeeeeecccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHH-HHHHHHhccccCCCCCCCCcc
Q psy15032 143 EPPQCRFVSRINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYL-IVCVLIRYQVDLTDRPFQPYL 216 (226)
Q Consensus 143 ~PP~V~F~TpI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~-~I~sLL~~~~~~~~~~~q~~~ 216 (226)
+||+|+|.|++|||||+ .+|+||+ ++|. +.|+|+++ +++||+ .|++|+.+.....+.|+++..
T Consensus 84 ~pP~v~f~t~i~HPnv~-~~G~iCl---~il~----~~W~p~~~---i~~vll~~l~~l~~~~~pn~~~p~n~ea 147 (167)
T 4ds2_A 84 EPPTVRFVTPVYSPLVT-GEGGICD---RMVN----DFWTPDQH---ASDVIKLVLDRVFSQYKSRRDDDVNPEA 147 (167)
T ss_dssp SCCEEEESSCCCCSSCC-TTSCCCT---HHHH----TTCCTTSC---HHHHHHHHHHHHHTSTTSCCSCCCCHHH
T ss_pred CCCEEEEeCCcccccCC-CCCEEEc---ccCc----CCCCCCCC---hHHHHHHHHHHHHhcCCCCCcchHhHHH
Confidence 99999999999999999 9999995 5665 47999886 999754 677788764334566766543
No 50
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.97 E-value=1.1e-30 Score=220.85 Aligned_cols=123 Identities=14% Similarity=0.237 Sum_probs=105.0
Q ss_pred ccHHHHHHHHHHHhHcCCCCCcEEEEe---cCCCCCCcc---eEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeee
Q psy15032 76 VPRNFRLLEELEHGQRGVGDGTISWGL---ENDDDMTLT---HWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRF 149 (226)
Q Consensus 76 ~~r~rRL~kEL~~L~~~~~~g~is~~~---~~~d~~nl~---~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F 149 (226)
..+.+||++||++|+ .++| +++.. .+++ |++ +|+++|. |++|||+||.|+++|.||++||++||+|+|
T Consensus 28 s~a~~RL~kEl~~l~--~~~~-i~~~~~~~p~~~--nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPT-VTLNVITSPDSA--DRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTT-EEEEEEECTTCC--CTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred cHHHHHHHHHHHhcc--CCCC-EEEEecCCCCCc--cCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 457899999999998 5566 77762 3333 799 9999997 888999999999999999999999999999
Q ss_pred ecccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhccccCCCCCCCCccc
Q psy15032 150 VSRINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVDLTDRPFQPYLS 217 (226)
Q Consensus 150 ~TpI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~~~~~~~q~~~~ 217 (226)
.|+||||||+ .+|+||++ +|. +.|+|+++ |++||.+|++||.+|+. ++|+++..+
T Consensus 102 ~t~i~HPnV~-~~G~iCl~---iL~----~~W~p~~~---i~~vL~~i~~ll~~pn~--~~pln~~aa 156 (190)
T 3o2u_A 102 LKKIFHPNID-LKGNVCLN---ILR----EDWSPALD---LQSIITGLLFLFLEPNP--NDPLNKDAA 156 (190)
T ss_dssp CSCCCCTTBC-TTSBBCCG---GGT----TTCCTTCC---HHHHHHHHHHHHHSCCT--TSCSSHHHH
T ss_pred ecCcccCCCC-CCCeEech---hcc----CCCCCCCC---HHHHHHHHHHHHhCCCC--CcchhHHHH
Confidence 9999999999 89999955 665 48999776 99999999999999854 567665543
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.97 E-value=1.2e-30 Score=219.85 Aligned_cols=118 Identities=19% Similarity=0.240 Sum_probs=104.6
Q ss_pred CccHHHHHHHHHHHhHcCC---CCCcEEEEecCCCCCCcceEEEEEeCC-CCCCCCC-----------CeEEEEEEeCCC
Q psy15032 75 VVPRNFRLLEELEHGQRGV---GDGTISWGLENDDDMTLTHWTGMIIGP-PRTPYEN-----------RMYSLKIECGPR 139 (226)
Q Consensus 75 ~~~r~rRL~kEL~~L~~~~---~~g~is~~~~~~d~~nl~~W~~~I~Gp-~~TpYeG-----------G~f~~~I~fP~~ 139 (226)
...+.+||++||++|++++ +.+ +++.+.++ |+++|+++|.|| ++|||+| |.|+++|.||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~-~~~~p~~d---nl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~ 100 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGI-YSVELIND---SLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDN 100 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTS-EEEEEETT---EEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCc-EEEEEcCC---ccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCC
Confidence 3457899999999999987 445 88887765 799999999998 9999998 899999999999
Q ss_pred CCCCCCeeeeecccccc-eeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcccc
Q psy15032 140 YPDEPPQCRFVSRINMT-CINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVD 206 (226)
Q Consensus 140 YP~~PP~V~F~TpI~HP-NV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~ 206 (226)
||++||+|+|.|++||| ||+ .+|+||+ ++|. .+.|+|+++ |++||++|++||.++..
T Consensus 101 YP~~PP~V~f~tpi~hPnnV~-~~G~ICL---~iL~---~~~WsP~~t---i~~VL~sI~slL~~p~a 158 (186)
T 1zuo_A 101 FPFDPPFVRVVLPVLSGGYVL-GGGALCM---ELLT---KQGWSSAYS---IESVIMQINATLVKGKA 158 (186)
T ss_dssp TTSSCCEEEEEESCEESTTBC-GGGBBCC---GGGS---TTTCCTTSC---HHHHHHHHHHHHHHTTC
T ss_pred CCCCCCeEEEeCCccCCCccC-CCCcEEe---ccCC---CCCCCCcCc---HHHHHHHHHHHHcCCCh
Confidence 99999999999999999 699 8999995 5675 257999876 99999999999999843
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.85 E-value=1.2e-22 Score=167.73 Aligned_cols=100 Identities=11% Similarity=0.094 Sum_probs=84.4
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCC----------eEEEEEEeCCCCCCCCCe
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENR----------MYSLKIECGPRYPDEPPQ 146 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG----------~f~~~I~fP~~YP~~PP~ 146 (226)
...+||++|++.|++. +.+..+ |+..|.+++.||+||+|+|| .|.++++||++||.+||+
T Consensus 32 ~w~~RL~eE~k~L~k~-------v~p~k~---n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPe 101 (172)
T 2z6o_A 32 LWVQRLKEEYQSLIRY-------VENNKN---ADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPE 101 (172)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHH---TTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCC
T ss_pred HHHHHHHHHHHHHHHH-------hccCcc---ccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCe
Confidence 3589999999999983 223333 68999999999999999999 999999999999999999
Q ss_pred eeeecc-cccceeeCCCCeEEccchhhccc--ccCCCCCCCCCCCCHHHHHH
Q psy15032 147 CRFVSR-INMTCINNTSGIVVVIMFWVMIE--AKATHYPVDLKTGTPDQVYL 195 (226)
Q Consensus 147 V~F~Tp-I~HPNV~~~~G~ICl~~LsiL~~--w~~~~W~Pa~s~~tI~~VL~ 195 (226)
|+|.+. +|||||| .+|+|||| +|.. |. .|+|+++ |.+||.
T Consensus 102 V~F~~~~~~hpnmY-~~G~ICLd---IL~kp~Ws--~~~P~~~---IahiL~ 144 (172)
T 2z6o_A 102 IAVPELDGKTAKMY-RGGKICLT---DHFKPLWA--RNVPKFG---LAHLMA 144 (172)
T ss_dssp CBCGGGTTTCSSBC-TTSBBCCC---TTHHHHHH--HHTTSCC---HHHHHH
T ss_pred eeeCCCCCCCCCCC-CCCcEech---hhcccccc--ccCCccC---HHHHHh
Confidence 999998 9999999 89999966 5532 43 4779776 998874
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.62 E-value=1.2e-15 Score=125.80 Aligned_cols=114 Identities=11% Similarity=0.012 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhHcCCCCCcEE--EEecCCCCCCcceEEEEEeCCCCCCCCCCe---EEEEEEeCCCCCCCCCeeeeecc-
Q psy15032 79 NFRLLEELEHGQRGVGDGTIS--WGLENDDDMTLTHWTGMIIGPPRTPYENRM---YSLKIECGPRYPDEPPQCRFVSR- 152 (226)
Q Consensus 79 ~rRL~kEL~~L~~~~~~g~is--~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~---f~~~I~fP~~YP~~PP~V~F~Tp- 152 (226)
.+|..+|+..+.+.-+..... ....++ ...++-+.+.|.-.++|+||. |.+.|.||++||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~d---G~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t 106 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSD---GTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLEN 106 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTT---SCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGG
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCC---CChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCC
Confidence 367778887765533222111 122233 346666777777779999999 88999999999999999987551
Q ss_pred ---------cc-cceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcccc
Q psy15032 153 ---------IN-MTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVD 206 (226)
Q Consensus 153 ---------I~-HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~ 206 (226)
|+ ||||| .+|+|| +++|. .|+|..+ ++.+||.+|+++|.+|+.
T Consensus 107 ~~m~~~~~~I~~hpnVD-~~G~I~---lpyL~-----~W~p~~s--~L~~ll~~l~~lf~ep~~ 159 (162)
T 3r3q_A 107 FDMNTISSSLPIQEYID-SNGWIA---LPILH-----AWDPAAM--NLIMVVQELMSLLHEPPQ 159 (162)
T ss_dssp CCTTTSCTTSTHHHHBC-TTSBBC---CGGGG-----SCCGGGC--CHHHHHHHHHHTTSCCCC
T ss_pred ccccccccccCCCCCCC-CCCcEe---Ccccc-----cCCCCcC--cHHHHHHHHHHHhcCCCC
Confidence 77 99999 999999 56776 3666432 599999999999999954
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.57 E-value=2.3e-16 Score=128.08 Aligned_cols=81 Identities=19% Similarity=0.292 Sum_probs=68.1
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCC----------eEEEEEEeCCCCCCCCCe
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENR----------MYSLKIECGPRYPDEPPQ 146 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG----------~f~~~I~fP~~YP~~PP~ 146 (226)
....||.+|+..|-+.- ...-..| ..|...+.||.||+|.|+ .|.++++||.+||.+||+
T Consensus 34 ~w~~RlkeEy~alI~yv-----~~nK~~d-----~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPe 103 (168)
T 3kpa_A 34 KWTARLKEEYASLITYV-----EHNKASD-----SHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPE 103 (168)
T ss_dssp HHHHHHHHHHHHHHHHH-----HHHHHTT-----CCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCC
T ss_pred HHHHHHHHHHHHHHHHH-----Hhccccc-----CCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCE
Confidence 36789999999986531 1111122 459999999999999999 999999999999999999
Q ss_pred eeeecc-cccceeeCCCCeEEcc
Q psy15032 147 CRFVSR-INMTCINNTSGIVVVI 168 (226)
Q Consensus 147 V~F~Tp-I~HPNV~~~~G~ICl~ 168 (226)
|+|.+. ++|||+| .+|+||||
T Consensus 104 I~Fp~ldgkt~kmY-r~GkICLd 125 (168)
T 3kpa_A 104 IALPELEGKTVKMY-RGGKICMT 125 (168)
T ss_dssp CBCGGGTTTCSSEE-TTTEECCC
T ss_pred eecccccCcCcccc-CCCcEEec
Confidence 999995 8999999 89999977
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.38 E-value=2.9e-12 Score=103.99 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=79.2
Q ss_pred HHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEE--EEEeCCCCCCCCCeeeeecc------c
Q psy15032 82 LLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSL--KIECGPRYPDEPPQCRFVSR------I 153 (226)
Q Consensus 82 L~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~--~I~fP~~YP~~PP~V~F~Tp------I 153 (226)
..+|+..+.+.=+........-.....++..|.++|. .+|+|+.|.+ .|.||++||++||.| |.++ .
T Consensus 25 t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~ 99 (146)
T 3obq_A 25 TVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIK 99 (146)
T ss_dssp HHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEEC
T ss_pred hHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEEC
Confidence 3456666554332211222112233347999999998 7899999995 899999999999999 7766 4
Q ss_pred ccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcc
Q psy15032 154 NMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQ 204 (226)
Q Consensus 154 ~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~ 204 (226)
.||||| .+|+|| ++.|.+| ++.. .++.+++..++++|...
T Consensus 100 ~~~~Vd-~~G~i~---lpyL~~W-----~~~~--snL~~ll~~l~~~F~~e 139 (146)
T 3obq_A 100 TGKHVD-ANGKIY---LPYLHEW-----KHPQ--SDLLGLIQVMIVVFGDE 139 (146)
T ss_dssp CBTTBC-TTCBBC---CHHHHTC-----CTTT--CCHHHHHHHHHHHHHHS
T ss_pred CCCCCC-CCCCEe---ccccccc-----CCCC--CCHHHHHHHHHHHHhhC
Confidence 899999 899999 6788754 4422 36999999999999876
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.66 E-value=0.26 Score=37.39 Aligned_cols=68 Identities=21% Similarity=0.195 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeec
Q psy15032 78 RNFRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVS 151 (226)
Q Consensus 78 r~rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~T 151 (226)
...+...|+..|+.-=++. +... .+. -..+.+.|....+..-+.-.+.+.|.||++||..||.+...+
T Consensus 11 ~~e~q~~EleaL~sIy~d~-~~~~--~~~---~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDS-FTVL--SEN---PPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSS-EEEC--CSS---SCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCc-eEEc--cCC---CCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4567788999988643444 4431 211 134444454222222223478899999999999999998765
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.04 E-value=1.1 Score=33.79 Aligned_cols=112 Identities=13% Similarity=0.002 Sum_probs=57.7
Q ss_pred HHHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCC--CCeEEEEEEeCCCCCCCCCeeeeecccccce
Q psy15032 80 FRLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYE--NRMYSLKIECGPRYPDEPPQCRFVSRINMTC 157 (226)
Q Consensus 80 rRL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYe--GG~f~~~I~fP~~YP~~PP~V~F~TpI~HPN 157 (226)
.+...|+.-|+.-=++. +...-.... ..-..+.+.+..+.+..-+ .-.+.+.|.+|++||..+|.+...+.. +
T Consensus 11 e~~~~EleaL~SIY~de-~~~~~~~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~---~ 85 (128)
T 2day_A 11 WVLPSEVEVLESIYLDE-LQVIKGNGR-TSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPR---G 85 (128)
T ss_dssp CHHHHHHHHHHHHSTTT-EEEECCTTS-SCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEE---S
T ss_pred HHHHHHHHHHHHHCCCc-eEEecCCCC-CCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCC---C
Confidence 35778988888643444 443221110 0123344445422221111 236789999999999999999877632 2
Q ss_pred eeCCCCeEEccchhhcc-cccCCCCCCCCCCCCHHHHHHHHHHHHhcc
Q psy15032 158 INNTSGIVVVIMFWVMI-EAKATHYPVDLKTGTPDQVYLIVCVLIRYQ 204 (226)
Q Consensus 158 V~~~~G~ICl~~LsiL~-~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~ 204 (226)
+. ......+...|. .|. + ... .--|.+++..++..|.+.
T Consensus 86 L~---~~~~~~L~~~L~~~~~-e-~~G---~~mif~lv~~lqe~l~~~ 125 (128)
T 2day_A 86 LS---DEQIHTILQVLGHVAK-A-GLG---TAMLYELIEKGKEILSGP 125 (128)
T ss_dssp SC---HHHHHHHHHHHHHHHH-H-TTT---SCCHHHHHHHHHHHHCCC
T ss_pred CC---HHHHHHHHHHHHHHHH-H-hCC---CEEhHHHHHHHHHHHHhc
Confidence 21 111111112222 221 0 111 113888888888888764
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=88.99 E-value=0.84 Score=35.04 Aligned_cols=71 Identities=14% Similarity=0.065 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhHcCCCCCcEEEEecCCCC---CCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeec
Q psy15032 79 NFRLLEELEHGQRGVGDGTISWGLENDDD---MTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVS 151 (226)
Q Consensus 79 ~rRL~kEL~~L~~~~~~g~is~~~~~~d~---~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~T 151 (226)
..+-..|+..|+.-=++. +...-...+. ..-..+.+.|....+ .-..-.+.+.|.+|++||..||.|...+
T Consensus 12 ~e~q~~EleaL~SIY~d~-~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDD-FTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHTTSSSS-EECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHHChhh-heecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 345678888888643333 3321110000 012345666663322 1113467899999999999999998765
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.27 E-value=1.2 Score=33.77 Aligned_cols=68 Identities=13% Similarity=-0.071 Sum_probs=38.5
Q ss_pred HHHHHHHHhHcCCCC-CcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeec
Q psy15032 81 RLLEELEHGQRGVGD-GTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVS 151 (226)
Q Consensus 81 RL~kEL~~L~~~~~~-g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~T 151 (226)
+...|+..|+.-=++ +-+...-.... +...+.+.+...... =..-.+.+.|.+|++||..||.+...+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~--~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSET--DGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSS--SCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCC--CCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 456788888753221 11221111110 234566666532210 012368899999999999999998764
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=84.47 E-value=0.49 Score=36.20 Aligned_cols=114 Identities=15% Similarity=0.090 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHHhHcCCCCCcEEEEecCCC-C-CCcceEEEEEeCCCC-C-CCCCCeEEEEEEeCCCCCCCCCeeeeecc
Q psy15032 77 PRNFRLLEELEHGQRGVGDGTISWGLENDD-D-MTLTHWTGMIIGPPR-T-PYENRMYSLKIECGPRYPDEPPQCRFVSR 152 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g~is~~~~~~d-~-~nl~~W~~~I~Gp~~-T-pYeGG~f~~~I~fP~~YP~~PP~V~F~Tp 152 (226)
....+...|+..|+.-=++. +...-.... . ..-....+.+. +.+ . .-..-.+.+.|.||++||..+|.|...+.
T Consensus 10 ~~~e~q~~EleaL~SIY~d~-~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~ 87 (137)
T 1ukx_A 10 SYSQRQDHELQALEAIYGSD-FQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKNA 87 (137)
T ss_dssp CHHHHHHHHHHHHHHHTSSS-EEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEEE
T ss_pred chHHHHHHHHHHHHHHCccc-ceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEecC
Confidence 34567788998888643343 432211000 0 00123444454 221 1 00113688999999999999999987432
Q ss_pred cccceeeCC-CCeEEccchhhccc-ccCCCCCCCCCCCCHHHHHHHHHHHHhcc
Q psy15032 153 INMTCINNT-SGIVVVIMFWVMIE-AKATHYPVDLKTGTPDQVYLIVCVLIRYQ 204 (226)
Q Consensus 153 I~HPNV~~~-~G~ICl~~LsiL~~-w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~ 204 (226)
.++... --.+| ..|.. |.. ... .--|.+++..++..|...
T Consensus 88 ---~~L~~~~~~~L~----~~L~~~~~e--~~G---~~mif~lv~~lqe~l~~~ 129 (137)
T 1ukx_A 88 ---KGLSNESVNLLK----SHLEELAKK--QCG---EVMIFELAHHVQSFLSEH 129 (137)
T ss_dssp ---ESSSSSHHHHHH----HHHHHHHHH--HTT---SCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHH----HHHHHHHHH--hCC---CEEhHHHHHHHHHHHHhc
Confidence 122200 00112 22221 110 000 113888888888888765
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=83.68 E-value=0.77 Score=36.07 Aligned_cols=68 Identities=13% Similarity=-0.064 Sum_probs=38.6
Q ss_pred eEEEEEEeCCCCCCCCCeeeeecccccceeeCCCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcccc
Q psy15032 129 MYSLKIECGPRYPDEPPQCRFVSRINMTCINNTSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQVD 206 (226)
Q Consensus 129 ~f~~~I~fP~~YP~~PP~V~F~TpI~HPNV~~~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~~~ 206 (226)
.+.+.|.+|++||..||.+...+.-... . ..-.+|-++...+.+ + ... .--|.+++..|+..+.+...
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~~l~~-~--~~~~L~~~L~~~~~~---~-~~G---~~mif~lv~~lqe~l~~~~~ 141 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSVLLSR-S--QQTQLNTDLTAFLQK---H-CHG---DVCILNATEWVREHASGYVS 141 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECTTSCH-H--HHHHHHHHHHHHHHH---S-SCS---SCCSHHHHHHHHHHHHHHCC
T ss_pred eEEEEEECCCCCCCCCCeEEEEcccCCH-H--HHHHHHHHHHHHHHH---h-cCC---cchHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999877643100 0 001123111122211 1 111 11377888888887776643
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=82.63 E-value=1.1 Score=35.54 Aligned_cols=24 Identities=21% Similarity=0.054 Sum_probs=21.7
Q ss_pred eEEEEEEeCCCCCCCCCeeeeecc
Q psy15032 129 MYSLKIECGPRYPDEPPQCRFVSR 152 (226)
Q Consensus 129 ~f~~~I~fP~~YP~~PP~V~F~Tp 152 (226)
.+.+.|.+|.+||..+|.+...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 789999999999999999987764
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=73.35 E-value=8.6 Score=31.75 Aligned_cols=85 Identities=12% Similarity=0.130 Sum_probs=58.1
Q ss_pred HHHHHHHHhHcCCCCCcEEEEecCCCCCCcceEEEEEeCCCCCCCCCCeEEEEEEeCCCCCCCCCeeeeecccccceeeC
Q psy15032 81 RLLEELEHGQRGVGDGTISWGLENDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGPRYPDEPPQCRFVSRINMTCINN 160 (226)
Q Consensus 81 RL~kEL~~L~~~~~~g~is~~~~~~d~~nl~~W~~~I~Gp~~TpYeGG~f~~~I~fP~~YP~~PP~V~F~TpI~HPNV~~ 160 (226)
+|.+|+.+|-=+. .. ..+. ++....+.+.... |....++|.++.+||.+||.+...-|. |
T Consensus 5 ~li~Ei~~iGW~~----l~--~id~---~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~---- 64 (186)
T 3zqs_A 5 SLIEEIGTLGWDK----LV--YADT---CFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--P---- 64 (186)
T ss_dssp SHHHHHHHHCGGG----EE--EECT---TSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--C----
T ss_pred HHHHHHHHhCCce----ee--eecC---CccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--C----
Confidence 6788888874331 11 1222 4777888888554 568899999999999999988655433 0
Q ss_pred CCCeEEccchhhcccccCCCCCCCCCCCCHHHHHHHHHHHHhcc
Q psy15032 161 TSGIVVVIMFWVMIEAKATHYPVDLKTGTPDQVYLIVCVLIRYQ 204 (226)
Q Consensus 161 ~~G~ICl~~LsiL~~w~~~~W~Pa~s~~tI~~VL~~I~sLL~~~ 204 (226)
+. -.|.|.. ++.+|+..++..|.+-
T Consensus 65 ----~~------------~~w~~~s---sL~~v~~qF~~~Le~l 89 (186)
T 3zqs_A 65 ----FC------------ASWTPQS---SLISIYSQFLAAIESL 89 (186)
T ss_dssp ----CC------------CCCCTTC---CHHHHHHHHHHHHHHT
T ss_pred ----cc------------cccCCCc---cHHHHHHHHHHHHHHH
Confidence 01 1477654 4999998888887765
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=32.90 E-value=33 Score=18.89 Aligned_cols=20 Identities=35% Similarity=0.252 Sum_probs=17.1
Q ss_pred cHHHHHHHHHHHhHcCCCCC
Q psy15032 77 PRNFRLLEELEHGQRGVGDG 96 (226)
Q Consensus 77 ~r~rRL~kEL~~L~~~~~~g 96 (226)
..+-||.-|+...+.++|.|
T Consensus 5 seldrlllelnavqhnppsg 24 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSG 24 (26)
T ss_pred HHHHHHHHHHhhhccCCCCC
Confidence 35689999999999999877
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=20.40 E-value=77 Score=26.22 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=22.4
Q ss_pred CCCeEEEEEEeCCCCCC-----CCCeeeeec
Q psy15032 126 ENRMYSLKIECGPRYPD-----EPPQCRFVS 151 (226)
Q Consensus 126 eGG~f~~~I~fP~~YP~-----~PP~V~F~T 151 (226)
+.|.|.|+-.+|--||. .||.|+|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 36889999999999998 799998874
Done!