BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15036
(179 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357624129|gb|EHJ75014.1| putative Ras-related protein Rab-27A [Danaus plexippus]
Length = 209
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F +V Y R R L RF SLTT YR MGFLL+FD+TNE S
Sbjct: 38 TVGIDFREKTVIYQQNSRQHRIHLQLWDTAGQERFRSLTTAFYRDAMGFLLLFDLTNEAS 97
Query: 123 FKDVEKWLLQIK 134
F +V W+ Q+K
Sbjct: 98 FLEVRNWIEQLK 109
>gi|242003701|ref|XP_002422827.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212505697|gb|EEB10089.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 213
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y I R +R L RF SLT YR MGFLL+FD+TNE S
Sbjct: 38 TVGIDFREKRLAYKIQGRSYRVHLQLWDTAGQERFRSLTRTFYRDAMGFLLLFDLTNEQS 97
Query: 123 FKDVEKWLLQIK 134
F ++ WL Q++
Sbjct: 98 FLEIRNWLDQLR 109
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L R REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSRAREVPTEEARMFAENN 147
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G LQ+ REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLQQAREVPTEEARMFAENN 147
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 30 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 89
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G LQ+ REV T + MF
Sbjct: 90 ERWLKE-------LYDHAEATIVVMLVGNKSDLQQAREVPTEEARMFAENN 133
>gi|195456678|ref|XP_002075239.1| GK16937 [Drosophila willistoni]
gi|194171324|gb|EDW86225.1| GK16937 [Drosophila willistoni]
Length = 230
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y+ R R L RF SLTT YR MGFLLIFD+T+E S
Sbjct: 43 TVGIDFREKRLVYNSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKS 102
Query: 123 FKDVEKWLLQIKV 135
F ++ WL Q+++
Sbjct: 103 FLEITNWLEQLRM 115
>gi|332027480|gb|EGI67563.1| Ras-related protein Rab-27A [Acromyrmex echinatior]
Length = 208
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTYSI-GPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V Y R R L RF SLTT YR +MGFLLIFD+TNE+
Sbjct: 38 TVGIDFKEKRVIYQTENGRSQRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNES 97
Query: 122 SFKDVEKWLLQIK 134
SF +V WL Q++
Sbjct: 98 SFLEVRNWLEQLR 110
>gi|213510702|ref|NP_001134713.1| Ras-related protein Rab-27B [Salmo salar]
gi|209735378|gb|ACI68558.1| Ras-related protein Rab-27B [Salmo salar]
Length = 218
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 57 KHLKYLGTGTHGKTVGIVFPAISVTYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFD 116
K + YLGTG++G T T+ + + + RF SLTT +R MGFLL+FD
Sbjct: 50 KRVTYLGTGSNGTT--------EKTFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 101
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TN+ SF +V W+ Q++
Sbjct: 102 LTNQQSFLNVRNWMSQLQA 120
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +VT +I + + + R+ ++T+ YRG +G LL+FD+T ++
Sbjct: 30 TIGVEFSTRTVTLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVA 89
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G LQ+ REV T + MF
Sbjct: 90 ERWLKE-------LYDHAEATIVVMLVGNKSDLQQAREVPTEEARMFAENN 133
>gi|195399430|ref|XP_002058323.1| GJ16030 [Drosophila virilis]
gi|194150747|gb|EDW66431.1| GJ16030 [Drosophila virilis]
Length = 226
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + YS R R L RF SLTT YR MGFLLIFD+T++ S
Sbjct: 43 TVGIDFREKRLVYSSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSQKS 102
Query: 123 FKDVEKWLLQIKV 135
F +V WL Q+++
Sbjct: 103 FLEVTNWLEQLRM 115
>gi|391330041|ref|XP_003739473.1| PREDICTED: ras-related protein Rab-3-like [Metaseiulus
occidentalis]
Length = 218
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SFK V+ W+ QIK
Sbjct: 77 ERYRTITTAYYRGAMGFILMYDVTNEDSFKCVQDWVTQIK 116
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLHQAREVPTEEARMFAENN 147
>gi|297703610|ref|XP_002828730.1| PREDICTED: ras-related protein Rab-3D [Pongo abelii]
Length = 219
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCL 155
R+ ++TT YRG MGFLL++DVTN+ SF V+ W QIK ++ Q++ G
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDVTNQESFAAVQDWATQIKT-----YSWDNAQVILXNGKC 137
Query: 156 ELLQRCRE 163
+L+ +
Sbjct: 138 DLMDSAHQ 145
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENN 147
>gi|91076370|ref|XP_967715.1| PREDICTED: similar to Ras-related protein Rab-27A (Rab-27)
(GTP-binding protein Ram) (Ram p25) [Tribolium
castaneum]
gi|270002552|gb|EEZ98999.1| hypothetical protein TcasGA2_TC004860 [Tribolium castaneum]
Length = 210
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y R R L RF SLTT YR MGFLL+FD+TNE S
Sbjct: 38 TVGIDFREKRLLYQSKGRNHRVHLQLWDTAGQERFRSLTTAFYRDAMGFLLLFDLTNEQS 97
Query: 123 FKDVEKWLLQIKV 135
F ++ W+ Q+++
Sbjct: 98 FLEIRNWVEQLRL 110
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F ++ T +I + + R+ ++T+ YRG +G LL++D+T S++DV
Sbjct: 43 TIGVEFATRTIEVDTNTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDV 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
EKWL +++ H + IV M G L+ R V T D +F + +
Sbjct: 103 EKWLKELR-------DHADANIVIMLIGNKCDLKHLRCVQTEDARLFAANE 146
>gi|268560172|ref|XP_002646149.1| C. briggsae CBR-AEX-6 protein [Caenorhabditis briggsae]
Length = 215
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 48 LGRRGIPLLKHL-KYLGTGTHGK---TVGIVFPAISVTYS-----IGPRYFRFPLV---- 94
LG G+ L +Y +G+ TVGI F V Y G R R L
Sbjct: 13 LGDSGVGKTSFLHRYTDNSFNGQFISTVGIDFKEKKVVYKSAKGGFGGRGQRVLLQLWDT 72
Query: 95 ---SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+KV
Sbjct: 73 AGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKV 116
>gi|195133854|ref|XP_002011354.1| GI16485 [Drosophila mojavensis]
gi|193907329|gb|EDW06196.1| GI16485 [Drosophila mojavensis]
Length = 228
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + YS R R L RF SLTT YR MGFLLIFD+T++ S
Sbjct: 43 TVGIDFREKRLVYSSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSQKS 102
Query: 123 FKDVEKWLLQIKV 135
F ++ WL Q+++
Sbjct: 103 FLEITNWLEQLRM 115
>gi|410905863|ref|XP_003966411.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 222
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGFLL++D+TN++SFK V
Sbjct: 57 TVGIDFKVKTVFRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFKAV 116
Query: 127 EKWLLQIKV 135
+ W QIK
Sbjct: 117 QDWATQIKT 125
>gi|340717732|ref|XP_003397331.1| PREDICTED: ras-related protein Rab-27A-like [Bombus terrestris]
Length = 208
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTYSIGP-RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V Y R R L RF SLTT YR +MGFLLIFD+TNE
Sbjct: 38 TVGIDFKEKRVIYQTANGRTQRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNEL 97
Query: 122 SFKDVEKWLLQIK 134
SF +V WL Q++
Sbjct: 98 SFLEVRNWLEQLR 110
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENN 147
>gi|307187848|gb|EFN72784.1| Ras-related protein Rab-27A [Camponotus floridanus]
Length = 208
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTYSIGP-RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V Y R R L RF SLTT YR +MGFLLIFD+TNE
Sbjct: 38 TVGIDFKEKRVIYQTANGRSQRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNEL 97
Query: 122 SFKDVEKWLLQIK 134
SF +V WL Q++
Sbjct: 98 SFLEVRNWLEQLR 110
>gi|380015014|ref|XP_003691507.1| PREDICTED: ras-related protein Rab-27A-like [Apis florea]
Length = 208
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTYSIGP-RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V Y R R L RF SLTT YR +MGFLLIFD+TNE
Sbjct: 38 TVGIDFKEKRVIYQTANGRTQRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNEL 97
Query: 122 SFKDVEKWLLQIK 134
SF +V WL Q++
Sbjct: 98 SFLEVRNWLEQLR 110
>gi|350419993|ref|XP_003492364.1| PREDICTED: ras-related protein Rab-27A-like [Bombus impatiens]
Length = 208
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTYSIGP-RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V Y R R L RF SLTT YR +MGFLLIFD+TNE
Sbjct: 38 TVGIDFKEKRVIYQTANGRTQRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNEL 97
Query: 122 SFKDVEKWLLQIK 134
SF +V WL Q++
Sbjct: 98 SFLEVRNWLEQLR 110
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENN 147
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 30 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 89
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 90 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENN 133
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 62 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVV 121
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 122 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTDEARMFAENN 165
>gi|66513978|ref|XP_394733.2| PREDICTED: ras-related protein Rab-27A-like isoform 1 [Apis
mellifera]
Length = 208
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTYSIGP-RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V Y R R L RF SLTT YR +MGFLLIFD+TNE
Sbjct: 38 TVGIDFKEKRVIYQTANGRTQRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNEL 97
Query: 122 SFKDVEKWLLQIK 134
SF +V WL Q++
Sbjct: 98 SFLEVRNWLEQLR 110
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 66 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 125
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 126 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENN 169
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENN 147
>gi|383855948|ref|XP_003703472.1| PREDICTED: ras-related protein Rab-27A-like isoform 1 [Megachile
rotundata]
Length = 208
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTY-SIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V Y + R R L RF SLTT YR +MGFLLIFD+TNE
Sbjct: 38 TVGIDFKEKRVIYQTTNGRTQRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNEL 97
Query: 122 SFKDVEKWLLQIK 134
SF +V WL Q++
Sbjct: 98 SFLEVRNWLEQLR 110
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|125811091|ref|XP_001361745.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|194758000|ref|XP_001961250.1| GF11093 [Drosophila ananassae]
gi|195153505|ref|XP_002017666.1| GL17187 [Drosophila persimilis]
gi|54636921|gb|EAL26324.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|190622548|gb|EDV38072.1| GF11093 [Drosophila ananassae]
gi|194113462|gb|EDW35505.1| GL17187 [Drosophila persimilis]
Length = 220
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK 120
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTDEARMFAENN 147
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T +++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T ++SF +V
Sbjct: 43 TIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNV 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
++WL ++K H + IV M G LQ + V T D F +
Sbjct: 103 QRWLKELK-------DHADANIVIMLVGNKSDLQHLKAVTTDDASAFAESN 146
>gi|17737457|ref|NP_523687.1| Rab3 [Drosophila melanogaster]
gi|194884193|ref|XP_001976180.1| GG22724 [Drosophila erecta]
gi|195333207|ref|XP_002033283.1| GM20500 [Drosophila sechellia]
gi|195483658|ref|XP_002090378.1| GE13081 [Drosophila yakuba]
gi|131800|sp|P25228.1|RAB3_DROME RecName: Full=Ras-related protein Rab-3
gi|158193|gb|AAA28843.1| rab3 [Drosophila melanogaster]
gi|7303712|gb|AAF58762.1| Rab3 [Drosophila melanogaster]
gi|16648446|gb|AAL25488.1| LP05860p [Drosophila melanogaster]
gi|40788408|dbj|BAD07037.1| Rab3 [Drosophila melanogaster]
gi|190659367|gb|EDV56580.1| GG22724 [Drosophila erecta]
gi|194125253|gb|EDW47296.1| GM20500 [Drosophila sechellia]
gi|194176479|gb|EDW90090.1| GE13081 [Drosophila yakuba]
gi|220947366|gb|ACL86226.1| Rab3-PA [synthetic construct]
gi|220956828|gb|ACL90957.1| Rab3-PA [synthetic construct]
Length = 220
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK 120
>gi|195429579|ref|XP_002062835.1| GK19661 [Drosophila willistoni]
gi|194158920|gb|EDW73821.1| GK19661 [Drosophila willistoni]
Length = 220
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK 120
>gi|195120790|ref|XP_002004904.1| GI20173 [Drosophila mojavensis]
gi|193909972|gb|EDW08839.1| GI20173 [Drosophila mojavensis]
Length = 220
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK 120
>gi|195066090|ref|XP_001996775.1| GH24197 [Drosophila grimshawi]
gi|193892005|gb|EDV90871.1| GH24197 [Drosophila grimshawi]
Length = 220
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK 120
>gi|195383704|ref|XP_002050566.1| GJ20130 [Drosophila virilis]
gi|194145363|gb|EDW61759.1| GJ20130 [Drosophila virilis]
Length = 220
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK 120
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 30 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 89
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 90 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENN 133
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENN 147
>gi|345484022|ref|XP_001599973.2| PREDICTED: ras-related protein Rab-3-like [Nasonia vitripennis]
Length = 256
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ WL QIK
Sbjct: 115 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWLTQIKT 154
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENN 147
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T +I + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENN 147
>gi|260821258|ref|XP_002605950.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
gi|229291287|gb|EEN61960.1| hypothetical protein BRAFLDRAFT_253798 [Branchiostoma floridae]
Length = 218
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWCTQIK 120
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 48 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 107
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 108 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 151
>gi|427787329|gb|JAA59116.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W+ QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWVTQIK 120
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|18543235|ref|NP_569921.1| Rab27, isoform C [Drosophila melanogaster]
gi|16768612|gb|AAL28525.1| GM10914p [Drosophila melanogaster]
gi|22831493|gb|AAF45634.2| Rab27, isoform C [Drosophila melanogaster]
gi|28317210|gb|AAO39612.1| GH17339p [Drosophila melanogaster]
gi|40788406|dbj|BAD07036.1| Rab27 [Drosophila melanogaster]
gi|220953266|gb|ACL89176.1| Rab27-PC [synthetic construct]
Length = 230
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y+ R R L RF SLTT YR MGFLLIFD+T+E S
Sbjct: 43 TVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKS 102
Query: 123 FKDVEKWLLQIK 134
F + WL Q++
Sbjct: 103 FLETANWLSQLR 114
>gi|399163163|gb|AFP33157.1| rab-27, partial [Caenorhabditis elegans]
Length = 214
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+KV
Sbjct: 76 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKV 115
>gi|427787355|gb|JAA59129.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W+ QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWVTQIK 120
>gi|17510659|ref|NP_493376.1| Protein AEX-6 [Caenorhabditis elegans]
gi|5824857|emb|CAB54484.1| Protein AEX-6 [Caenorhabditis elegans]
gi|40788404|dbj|BAD07035.1| Rab27 [Caenorhabditis elegans]
Length = 215
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+KV
Sbjct: 77 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKV 116
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTDEARMFAENN 147
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 42 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 101
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 102 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 145
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTDEARMFAENN 147
>gi|313220927|emb|CBY31762.1| unnamed protein product [Oikopleura dioica]
gi|313226508|emb|CBY21653.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V + + + + R+ ++TT YRG MGF+L++D+TNE+SF V
Sbjct: 51 TVGIDFKVKTVQRNNKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV 110
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 111 QDWATQIK 118
>gi|307176945|gb|EFN66251.1| Ras-related protein Rab-3 [Camponotus floridanus]
Length = 258
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 117 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWITQIK 155
>gi|341885326|gb|EGT41261.1| hypothetical protein CAEBREN_28604 [Caenorhabditis brenneri]
gi|341903761|gb|EGT59696.1| hypothetical protein CAEBREN_04237 [Caenorhabditis brenneri]
Length = 215
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+KV
Sbjct: 77 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKV 116
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTDEARMFAENN 147
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|194912495|ref|XP_001982517.1| GG12695 [Drosophila erecta]
gi|190648193|gb|EDV45486.1| GG12695 [Drosophila erecta]
Length = 234
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y+ R R L RF SLTT YR MGFLLIFD+T+E S
Sbjct: 47 TVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKS 106
Query: 123 FKDVEKWLLQIK 134
F + WL Q++
Sbjct: 107 FLETANWLSQLR 118
>gi|324517810|gb|ADY46924.1| Ras-related protein Rab-27B [Ascaris suum]
Length = 216
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+KV
Sbjct: 77 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKV 116
>gi|308490516|ref|XP_003107450.1| CRE-AEX-6 protein [Caenorhabditis remanei]
gi|308251818|gb|EFO95770.1| CRE-AEX-6 protein [Caenorhabditis remanei]
Length = 215
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+KV
Sbjct: 77 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKV 116
>gi|195469749|ref|XP_002099799.1| GE16524 [Drosophila yakuba]
gi|194187323|gb|EDX00907.1| GE16524 [Drosophila yakuba]
Length = 234
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y+ R R L RF SLTT YR MGFLLIFD+T+E S
Sbjct: 47 TVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKS 106
Query: 123 FKDVEKWLLQIK 134
F + WL Q++
Sbjct: 107 FLETANWLSQLR 118
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTDEARMFAENN 147
>gi|307777816|dbj|BAJ21304.1| Rab-family small GTPase Rab2E [Tetrahymena thermophila]
Length = 234
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 67 HGKTVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
H T+G+ F + ++ Y+I + + F S+T YRG++G LL++DVT E+SF
Sbjct: 36 HDATIGVEFGSKNIEVDGYTIKIQIWDTAGQESFRSITRSYYRGSVGALLVYDVTKEDSF 95
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQS 177
+D+ KW + D + + +L + + ++L REV D F S ++
Sbjct: 96 QDLNKW-----ISDVSENANKDLSVAVLGNKIDLDN--REVKAKDGEAFASERN 142
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 57 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 116
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 117 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 160
>gi|1589839|gb|AAB09697.1| rab3 GTPase homolog SUrab3, partial [Strongylocentrotus purpuratus]
Length = 61
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W QIK
Sbjct: 5 ERYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWCTQIK 44
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T ++SF +V
Sbjct: 44 TIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
++WL ++K H + IV M G LQ + V T D F +
Sbjct: 104 QRWLKELK-------DHADANIVIMLVGNKSDLQHLKAVTTDDASAFAESN 147
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSHAREVPTDEARMFAENN 147
>gi|241997950|ref|XP_002433618.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
gi|215495377|gb|EEC05018.1| synaptic vesicle-associated GTP-binding protein, putative [Ixodes
scapularis]
Length = 219
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWVTQIK 120
>gi|341881403|gb|EGT37338.1| hypothetical protein CAEBREN_30856 [Caenorhabditis brenneri]
Length = 283
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 146 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 185
>gi|24639106|ref|NP_726743.1| Rab27, isoform B [Drosophila melanogaster]
gi|4691239|emb|CAA19844.2| EG:80H7.4 [Drosophila melanogaster]
gi|7290172|gb|AAF45635.1| Rab27, isoform B [Drosophila melanogaster]
gi|313661533|gb|ADR71721.1| LP12150p [Drosophila melanogaster]
Length = 236
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y+ R R L RF SLTT YR MGFLLIFD+T+E S
Sbjct: 49 TVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKS 108
Query: 123 FKDVEKWLLQIK 134
F + WL Q++
Sbjct: 109 FLETANWLSQLR 120
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G LL++D+T ++SF +V++WL ++K H + IV M G
Sbjct: 72 RYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELK-------DHADANIVIMLVGN 124
Query: 155 LELLQRCREVVTPDQIMFGSTQ 176
LQ + V T D F +
Sbjct: 125 KSDLQHLKAVTTDDASAFAESN 146
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G LL++D+T ++SF +V++WL ++K H + IV M G
Sbjct: 79 RYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELK-------DHADANIVIMLVGN 131
Query: 155 LELLQRCREVVTPDQIMFGSTQ 176
LQ + V T D F +
Sbjct: 132 KSDLQHLKAVTTDDASAFAESN 153
>gi|383854082|ref|XP_003702551.1| PREDICTED: ras-related protein Rab-3-like [Megachile rotundata]
Length = 264
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 122 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 161
>gi|195162179|ref|XP_002021933.1| GL14374 [Drosophila persimilis]
gi|198470911|ref|XP_001355432.2| GA13248 [Drosophila pseudoobscura pseudoobscura]
gi|194103831|gb|EDW25874.1| GL14374 [Drosophila persimilis]
gi|198145678|gb|EAL32490.2| GA13248 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y+ R R L RF SLTT YR MGFLLIFD+T+E S
Sbjct: 43 TVGIDFREKRLVYNSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSEKS 102
Query: 123 FKDVEKWLLQIKV 135
F + WL Q+++
Sbjct: 103 FLETVNWLEQLRM 115
>gi|225717542|gb|ACO14617.1| Ras-related protein Rab-3 [Caligus clemensi]
Length = 359
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++DVTNE+SF V W QIK
Sbjct: 224 RYRTITTAYYRGAMGFILMYDVTNEDSFNHVHDWCTQIKT 263
>gi|184186083|ref|NP_001116967.1| rab3 GTPase [Strongylocentrotus purpuratus]
gi|60653473|gb|AAB67800.2| GTP-binding protein [Strongylocentrotus purpuratus]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWCTQIK 121
>gi|66514595|ref|XP_623213.1| PREDICTED: ras-related protein Rab-3 isoform 2 [Apis mellifera]
Length = 269
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 127 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 166
>gi|357613110|gb|EHJ68321.1| ras-related GTP-binding protein Rab3 [Danaus plexippus]
Length = 155
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 16 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 55
>gi|350411512|ref|XP_003489373.1| PREDICTED: ras-related protein Rab-3-like [Bombus impatiens]
Length = 270
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 128 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 167
>gi|332016796|gb|EGI57617.1| Ras-related protein Rab-3 [Acromyrmex echinatior]
Length = 260
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 117 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 156
>gi|321453282|gb|EFX64533.1| hypothetical protein DAPPUDRAFT_304534 [Daphnia pulex]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+TNE SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFLLMYDITNEESFNSVQDWCTQIK 120
>gi|312098751|ref|XP_003149152.1| hypothetical protein LOAG_13598 [Loa loa]
Length = 188
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCL 155
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+K+ + E + + G
Sbjct: 53 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKI-----HAYCETPDIIICGNK 107
Query: 156 ELLQRCREVVTPDQIMFGS 174
L+ R+V T I
Sbjct: 108 SDLENRRQVSTARAIQLAD 126
>gi|322800183|gb|EFZ21268.1| hypothetical protein SINV_07541 [Solenopsis invicta]
Length = 220
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 77 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWITQIK 116
>gi|393911156|gb|EFO14917.2| hypothetical protein LOAG_13598 [Loa loa]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCL 155
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+K+ + E + + G
Sbjct: 77 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKI-----HAYCETPDIIICGNK 131
Query: 156 ELLQRCREVVTPDQIMFGS 174
L+ R+V T I
Sbjct: 132 SDLENRRQVSTARAIQLAD 150
>gi|410924594|ref|XP_003975766.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T TVGI F ++ S I + + R+ ++TT YRG MGF+L++D+TNE
Sbjct: 47 TPTFVSTVGIDFKVKTIYRSDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNE 106
Query: 121 NSFKDVEKWLLQIKV 135
+SF V+ W QIK
Sbjct: 107 DSFNAVQDWSTQIKT 121
>gi|112983326|ref|NP_001037620.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
gi|102993253|gb|ABF71469.1| ras-related GTP-binding protein Rab3 [Bombyx mori]
Length = 218
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 79 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 118
>gi|340729787|ref|XP_003403177.1| PREDICTED: ras-related protein Rab-3-like [Bombus terrestris]
Length = 270
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 128 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 167
>gi|402594149|gb|EJW88075.1| hypothetical protein WUBG_01016 [Wuchereria bancrofti]
Length = 213
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+LIFD+TNE SF ++ WL Q+K+
Sbjct: 77 RFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKI 116
>gi|380020626|ref|XP_003694183.1| PREDICTED: ras-related protein Rab-3-like [Apis florea]
Length = 228
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 86 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 125
>gi|308493695|ref|XP_003109037.1| CRE-RAB-3 protein [Caenorhabditis remanei]
gi|308247594|gb|EFO91546.1| CRE-RAB-3 protein [Caenorhabditis remanei]
Length = 280
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 144 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKT 183
>gi|195045379|ref|XP_001991965.1| GH24468 [Drosophila grimshawi]
gi|193892806|gb|EDV91672.1| GH24468 [Drosophila grimshawi]
Length = 234
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + Y R R L RF SLTT YR MGFLLIFD+T++ S
Sbjct: 43 TVGIDFREKRLVYRSRGRRHRIHLQIWDTAGQERFRSLTTAFYRDAMGFLLIFDLTSQKS 102
Query: 123 FKDVEKWLLQIK 134
F ++ WL Q++
Sbjct: 103 FLEISNWLEQLR 114
>gi|91093088|ref|XP_969292.1| PREDICTED: similar to ras-related protein Rab-3C, putative
[Tribolium castaneum]
Length = 219
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 80 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 119
>gi|307207614|gb|EFN85274.1| Ras-related protein Rab-3 [Harpegnathos saltator]
Length = 222
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 80 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 119
>gi|270013048|gb|EFA09496.1| hypothetical protein TcasGA2_TC010990 [Tribolium castaneum]
Length = 297
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 158 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 197
>gi|71982447|ref|NP_001021973.1| Protein RAB-3, isoform a [Caenorhabditis elegans]
gi|373219015|emb|CCD65020.1| Protein RAB-3, isoform a [Caenorhabditis elegans]
Length = 233
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 96 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 135
>gi|358337804|dbj|GAA31310.2| Ras-related protein Rab-3B, partial [Clonorchis sinensis]
Length = 221
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 55 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIK 94
>gi|7496249|pir||T15546 hypothetical protein C18A3.6 - Caenorhabditis elegans
Length = 343
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 148 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 186
>gi|170049010|ref|XP_001853751.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
gi|167870968|gb|EDS34351.1| GTP-binding protein Rab-3D [Culex quinquefasciatus]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 80 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 119
>gi|157112793|ref|XP_001651875.1| ras-related protein Rab-3C, putative [Aedes aegypti]
gi|108877951|gb|EAT42176.1| AAEL006267-PA [Aedes aegypti]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 80 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 119
>gi|193664606|ref|XP_001944695.1| PREDICTED: ras-related protein Rab-3-like [Acyrthosiphon pisum]
Length = 218
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 80 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 119
>gi|225710138|gb|ACO10915.1| Ras-related protein Rab-3 [Caligus rogercresseyi]
Length = 217
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE+SF V W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNHVHDWCTQIK 120
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ V
Sbjct: 44 TIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF
Sbjct: 104 ERWLKE-------LYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENN 147
>gi|242004797|ref|XP_002423263.1| RAB 3 and, putative [Pediculus humanus corporis]
gi|212506265|gb|EEB10525.1| RAB 3 and, putative [Pediculus humanus corporis]
Length = 255
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 115 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 154
>gi|268531330|ref|XP_002630791.1| C. briggsae CBR-RAB-3 protein [Caenorhabditis briggsae]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 121
>gi|443685362|gb|ELT88996.1| hypothetical protein CAPTEDRAFT_149846 [Capitella teleta]
Length = 218
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF+ V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDVTNEESFQAVQDWCTQIK 120
>gi|73976938|ref|XP_849630.1| PREDICTED: ras-related protein Rab-3B isoform 1 [Canis lupus
familiaris]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWATQIK 121
>gi|402582915|gb|EJW76860.1| Rab3 protein [Wuchereria bancrofti]
Length = 213
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 122
>gi|341900426|gb|EGT56361.1| CBN-RAB-3 protein [Caenorhabditis brenneri]
Length = 219
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 121
>gi|301759907|ref|XP_002915768.1| PREDICTED: ras-related protein Rab-3B-like [Ailuropoda melanoleuca]
gi|281353546|gb|EFB29130.1| hypothetical protein PANDA_003782 [Ailuropoda melanoleuca]
Length = 219
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWATQIK 121
>gi|71982452|ref|NP_001021974.1| Protein RAB-3, isoform b [Caenorhabditis elegans]
gi|55976564|sp|Q94986.1|RAB3_CAEEL RecName: Full=Ras-related protein Rab-3
gi|1619869|gb|AAB16980.1| RAB-3 [Caenorhabditis elegans]
gi|1619871|gb|AAB16981.1| RAB-3, partial [Caenorhabditis elegans]
gi|40788400|dbj|BAD07033.1| Rab3 [Caenorhabditis elegans]
gi|373219016|emb|CCD65021.1| Protein RAB-3, isoform b [Caenorhabditis elegans]
Length = 219
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 121
>gi|348511151|ref|XP_003443108.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 222
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGFLL++D+TN++SF V
Sbjct: 57 TVGIDFKVKTVFRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFNAV 116
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 117 QDWATQIK 124
>gi|399163141|gb|AFP33146.1| rab-3, partial [Caenorhabditis elegans]
Length = 218
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 120
>gi|256082187|ref|XP_002577342.1| rab 3 and [Schistosoma mansoni]
Length = 236
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 95 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIK 133
>gi|31210411|ref|XP_314172.1| AGAP005255-PA [Anopheles gambiae str. PEST]
gi|30176728|gb|EAA09493.2| AGAP005255-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIK 120
>gi|324522597|gb|ADY48087.1| Ras-related protein Rab-3 [Ascaris suum]
Length = 254
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 117 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 155
>gi|397776464|gb|AFO64930.1| Rab3 [Ruditapes philippinarum]
Length = 219
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNAVQDWCTQIK 120
>gi|339250014|ref|XP_003373992.1| GTP-binding protein Rab-3D [Trichinella spiralis]
gi|316969762|gb|EFV53812.1| GTP-binding protein Rab-3D [Trichinella spiralis]
Length = 218
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 79 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 118
>gi|19115708|ref|NP_594796.1| GTPase Ypt4 [Schizosaccharomyces pombe 972h-]
gi|3219964|sp|O13876.1|YPT4_SCHPO RecName: Full=GTP-binding protein ypt4
gi|2330745|emb|CAB11239.1| GTPase Ypt4 [Schizosaccharomyces pombe]
Length = 234
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNENS 122
TVGI F + ++ +G + R L +F S+ YRG G +L++DVTN++S
Sbjct: 41 TVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDS 100
Query: 123 FKDVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
F+++ WL I+ M + V + G LQ R+V T + F S +
Sbjct: 101 FEELSSWLSDIRAMAPSTI------CVVLAGSKSDLQNQRQVSTEEAAEFCSEK 148
>gi|312071697|ref|XP_003138728.1| rab family protein 3 [Loa loa]
gi|307766114|gb|EFO25348.1| Ras-like protein Rab-3 [Loa loa]
Length = 221
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 122
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G +L++D+T + +F+DV
Sbjct: 44 TIGVEFATRSIQVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGS 174
E+WLL+++ H + IV M G L+ R V + D +G
Sbjct: 104 ERWLLEVR-------EHADPTIVVMLVGNKCDLKHLRAVASDDAKKYGD 145
>gi|432854572|ref|XP_004067967.1| PREDICTED: ras-related protein Rab-3A-like [Oryzias latipes]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIK 120
>gi|348523125|ref|XP_003449074.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIK 120
>gi|291235024|ref|XP_002737446.1| PREDICTED: Rab-protein 3-like isoform 3 [Saccoglossus kowalevskii]
Length = 227
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF+ V+ W QIK
Sbjct: 90 RYRTITTAYYRGAMGFILMYDVTNEESFQAVQDWSTQIK 128
>gi|353232639|emb|CCD79994.1| putative rab 3 and [Schistosoma mansoni]
Length = 171
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 76 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIK 114
>gi|291235020|ref|XP_002737444.1| PREDICTED: Rab-protein 3-like isoform 1 [Saccoglossus kowalevskii]
gi|291235022|ref|XP_002737445.1| PREDICTED: Rab-protein 3-like isoform 2 [Saccoglossus kowalevskii]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF+ V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFQAVQDWSTQIK 120
>gi|60602332|gb|AAX27623.1| unknown [Schistosoma japonicum]
Length = 170
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 75 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIK 114
>gi|50582491|dbj|BAD32700.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDVTNEESFNAVQDWCTQIK 121
>gi|1845598|gb|AAB47925.1| Rab3 [Doryteuthis pealeii]
Length = 220
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNAVQDWCTQIK 120
>gi|318037484|ref|NP_001188027.1| ras-related protein rab-3d [Ictalurus punctatus]
gi|308324635|gb|ADO29452.1| ras-related protein rab-3d [Ictalurus punctatus]
Length = 223
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGFLL++D+TN++SF V
Sbjct: 58 TVGIDFKVKTVFRNNKRIKLQIWDTAGQERYRTVTTAYYRGAMGFLLMYDITNQDSFNAV 117
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 118 QDWATQIK 125
>gi|29841146|gb|AAP06159.1| similar to NM_078963 GTP-binding protein rab3A in Drosophila
melanogaster [Schistosoma japonicum]
gi|226480624|emb|CAX73409.1| Rab-protein 8 [Schistosoma japonicum]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 76 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIK 114
>gi|224496098|ref|NP_001139069.1| RAB3D, member RAS oncogene family, a [Danio rerio]
Length = 223
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 22 GKPTYRCTKVTKMTAAKEFSFNF------GTQLGRRGIPLLKHLKYLGTGTHGKTVGIVF 75
T T+V K A + F + F + +G+ L ++ T TVGI F
Sbjct: 4 ANDTRHQTQVQKDVADQNFDYMFKLLIIGNSSVGKTSF-LFRYADDSFTSAFVSTVGIDF 62
Query: 76 PAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQ 132
+V + + + + R+ ++TT YRG MGFLL++D+TN++SF V+ W Q
Sbjct: 63 KVKTVYRNEKRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFYAVQDWATQ 122
Query: 133 IK 134
IK
Sbjct: 123 IK 124
>gi|47216418|emb|CAG01969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIKT 121
>gi|344250964|gb|EGW07068.1| Ras-related protein Rab-25 [Cricetulus griseus]
Length = 132
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGAL 140
T ++ + + + R+ ++T+ YRG +G LL+FD+T ++ VE+WL + L
Sbjct: 4 TAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKE-------L 56
Query: 141 FTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGS 174
+ H E IV M G L + REV T + MF
Sbjct: 57 YDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAE 91
>gi|431922009|gb|ELK19182.1| cAMP-specific 3',5'-cyclic phosphodiesterase 4C [Pteropus alecto]
Length = 900
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 763 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 801
>gi|339253912|ref|XP_003372179.1| putative small GTP-binding protein domain protein [Trichinella
spiralis]
gi|316967452|gb|EFV51876.1| putative small GTP-binding protein domain protein [Trichinella
spiralis]
Length = 269
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 28/40 (70%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT YR MGFLL +DVTNE SF +V WL Q+ V
Sbjct: 83 RFRSLTTAFYRDAMGFLLFYDVTNEASFLNVRDWLAQLSV 122
>gi|224090593|ref|XP_002187909.1| PREDICTED: ras-related protein Rab-3C [Taeniopygia guttata]
Length = 227
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 91 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIKT 130
>gi|51010929|ref|NP_001003419.1| ras-related protein Rab-3C [Danio rerio]
gi|50370044|gb|AAH75980.1| RAB3A, member RAS oncogene family [Danio rerio]
Length = 220
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIK 121
>gi|432911772|ref|XP_004078715.1| PREDICTED: ras-related protein Rab-3A-like [Oryzias latipes]
Length = 218
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 82 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIK 120
>gi|428179155|gb|EKX48027.1| hypothetical protein GUITHDRAFT_93719 [Guillardia theta CCMP2712]
Length = 214
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YR MG LL++D+TNE SFK++E+WL I+
Sbjct: 76 RFKTITTAHYRNAMGILLVYDITNEQSFKNIEEWLKNIE 114
>gi|56118664|ref|NP_001007970.1| rab27a, member ras oncogene family [Xenopus (Silurana) tropicalis]
gi|51513410|gb|AAH80481.1| RAB27A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268736|emb|CAJ82407.1| RAB27A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 221
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y S GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRSNGPDGISGRGQRVHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q++V
Sbjct: 101 LTNEQSFLNVRNWMSQLQV 119
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 42 TIGVEFATRSIRFEDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 101
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +S+
Sbjct: 102 ERWLKELR-------DHTDSNIVIMLVGNKADLRHLRAVATEDAKAFAEMEST 147
>gi|238231785|ref|NP_001154079.1| ras-related protein Rab-3C [Oncorhynchus mykiss]
gi|225703896|gb|ACO07794.1| Ras-related protein Rab-3A [Oncorhynchus mykiss]
Length = 136
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+TN++SF V+ W QIK
Sbjct: 87 RYRTITTAYYRGAMGFLLMYDITNQDSFNAVQDWATQIK 125
>gi|325297096|ref|NP_001191556.1| Rab3 [Aplysia californica]
gi|392973|gb|AAA03315.1| Rab3 [Aplysia californica]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+TNE SF V+ W QIK
Sbjct: 82 RYPTITTAYYRGAMGFLLMYDITNEESFNAVQDWCTQIK 120
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
+GT+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 SGTYISTIGIDFKIRTVEVEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|50540426|ref|NP_001002679.1| ras-related protein Rab-3B [Danio rerio]
gi|49899208|gb|AAH75784.1| Zgc:86892 [Danio rerio]
Length = 220
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGFLL+FD+TN +SF V
Sbjct: 56 TVGIDFKVKTVFRNNKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMFDITNRDSFNAV 115
Query: 127 EKWLLQIK 134
W QIK
Sbjct: 116 RDWATQIK 123
>gi|47211791|emb|CAF93705.1| unnamed protein product [Tetraodon nigroviridis]
Length = 143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGFLL++D+TN++SF V+ W QIK
Sbjct: 7 RYRTITTAYYRGAMGFLLMYDITNQDSFNAVQDWATQIKT 46
>gi|348527766|ref|XP_003451390.1| PREDICTED: ras-related protein Rab-3B-like [Oreochromis niloticus]
Length = 218
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|189502804|gb|ACE06783.1| unknown [Schistosoma japonicum]
Length = 248
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W+ QIK
Sbjct: 116 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIK 155
>gi|449269313|gb|EMC80103.1| Ras-related protein Rab-27A [Columba livia]
Length = 221
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY------SIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y +G R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRPNGPDGVGGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|47212450|emb|CAF94102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 120
>gi|5852192|gb|AAD53965.1| GTP-binding protein [Rattus norvegicus]
Length = 112
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 21 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 60
>gi|355762181|gb|EHH61901.1| hypothetical protein EGM_20025, partial [Macaca fascicularis]
Length = 143
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 7 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKT 46
>gi|224062432|ref|XP_002197779.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Taeniopygia
guttata]
gi|449471031|ref|XP_004176940.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Taeniopygia
guttata]
Length = 221
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY------SIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y +G R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRPNGPDGVGGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|196011170|ref|XP_002115449.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
gi|190582220|gb|EDV22294.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
Length = 222
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE+SF V+ W QIK
Sbjct: 86 RYRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIK 124
>gi|432853436|ref|XP_004067706.1| PREDICTED: ras-related protein Rab-3B-like [Oryzias latipes]
Length = 217
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 120
>gi|395513171|ref|XP_003760803.1| PREDICTED: ras-related protein Rab-3A [Sarcophilus harrisii]
Length = 359
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 221 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 261
>gi|162760|gb|AAA30416.1| GTP-binding protein [Bos taurus]
Length = 220
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|440548636|gb|AGC10823.1| Rab-3 [Eriocheir sinensis]
Length = 209
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIK 120
>gi|417408831|gb|JAA50951.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 91 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 129
>gi|431896886|gb|ELK06150.1| Ras-related protein Rab-3B [Pteropus alecto]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|38051907|gb|AAH60562.1| Rab3b protein [Rattus norvegicus]
Length = 228
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|291398900|ref|XP_002715144.1| PREDICTED: RAB3B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|148698775|gb|EDL30722.1| RAB3B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 225
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 89 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 127
>gi|13592037|ref|NP_112353.1| ras-related protein Rab-3B [Rattus norvegicus]
gi|6093900|sp|Q63941.2|RAB3B_RAT RecName: Full=Ras-related protein Rab-3B
gi|2251196|emb|CAA74341.1| Rab3B protein [Rattus norvegicus]
gi|149035702|gb|EDL90383.1| RAB3B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|311259329|ref|XP_003128025.1| PREDICTED: ras-related protein Rab-3B-like [Sus scrofa]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|148231966|ref|NP_001085863.1| RAB27A, member RAS oncogene family [Xenopus laevis]
gi|49115537|gb|AAH73442.1| MGC80943 protein [Xenopus laevis]
Length = 221
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y S GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRSNGPDGTSGRGQRVHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWMSQLQI 119
>gi|351697769|gb|EHB00688.1| Ras-related protein Rab-3B [Heterocephalus glaber]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|198427845|ref|XP_002120167.1| PREDICTED: similar to RAB12, member RAS oncogene family [Ciona
intestinalis]
Length = 223
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
TVGI F +VT +G R R + RF S+TT YR G LL++DVTN S++
Sbjct: 58 TVGIDFRIKTVT--VGGRRIRLQIWDTAGQERFNSITTAYYRNARGILLLYDVTNPESYR 115
Query: 125 DVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQ 159
++ KW+ K+++ + E+ IV + LE +Q
Sbjct: 116 NITKWM---KLIEEYGRSDVEVAIVGNKADLENVQ 147
>gi|354468180|ref|XP_003496545.1| PREDICTED: ras-related protein Rab-3B-like [Cricetulus griseus]
gi|81870701|sp|Q5KTJ7.1|RAB3B_MESAU RecName: Full=Ras-related protein Rab-3B
gi|57157443|dbj|BAD83699.1| Rab3B [Mesocricetus auratus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|19923750|ref|NP_002858.2| ras-related protein Rab-3B [Homo sapiens]
gi|38258903|sp|P20337.2|RAB3B_HUMAN RecName: Full=Ras-related protein Rab-3B
gi|20379040|gb|AAM21080.1|AF498932_1 small GTP binding protein RAB3B [Homo sapiens]
gi|13477155|gb|AAH05035.1| RAB3B, member RAS oncogene family [Homo sapiens]
gi|119627207|gb|EAX06802.1| RAB3B, member RAS oncogene family [Homo sapiens]
gi|312152638|gb|ADQ32831.1| RAB3B, member RAS oncogene family [synthetic construct]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|12963723|ref|NP_076026.1| ras-related protein Rab-3B [Mus musculus]
gi|38258239|sp|Q9CZT8.1|RAB3B_MOUSE RecName: Full=Ras-related protein Rab-3B
gi|12597435|gb|AAG60046.1|AF312036_1 small GTP binding protein Rab3B [Mus musculus]
gi|12848741|dbj|BAB28071.1| unnamed protein product [Mus musculus]
gi|26350141|dbj|BAC38710.1| unnamed protein product [Mus musculus]
gi|34980993|gb|AAH57173.1| RAB3B, member RAS oncogene family [Mus musculus]
gi|56078684|gb|AAH51918.2| RAB3B, member RAS oncogene family [Mus musculus]
gi|112292945|dbj|BAF02850.1| Rab3B [Mus musculus]
gi|148698774|gb|EDL30721.1| RAB3B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|440896449|gb|ELR48367.1| Ras-related protein Rab-3A, partial [Bos grunniens mutus]
Length = 221
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 122
>gi|550066|gb|AAA60243.1| GTP-binding protein [Homo sapiens]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|403258075|ref|XP_003921608.1| PREDICTED: ras-related protein Rab-3B isoform 1 [Saimiri
boliviensis boliviensis]
gi|403258077|ref|XP_003921609.1| PREDICTED: ras-related protein Rab-3B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|348554601|ref|XP_003463114.1| PREDICTED: ras-related protein Rab-3B-like [Cavia porcellus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|158256738|dbj|BAF84342.1| unnamed protein product [Homo sapiens]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|444724879|gb|ELW65466.1| Ras-related protein Rab-3B [Tupaia chinensis]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|297664935|ref|XP_002810871.1| PREDICTED: ras-related protein Rab-3B [Pongo abelii]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|426215520|ref|XP_004002020.1| PREDICTED: ras-related protein Rab-3B [Ovis aries]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|410967277|ref|XP_003990147.1| PREDICTED: ras-related protein Rab-3B [Felis catus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|296207942|ref|XP_002750863.1| PREDICTED: ras-related protein Rab-3B [Callithrix jacchus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|221111768|ref|XP_002162570.1| PREDICTED: ras-related protein Rab-3C-like [Hydra magnipapillata]
Length = 213
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGF+L++DVTNE SFK V
Sbjct: 50 TVGIDFKVKTVFRNDKQIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFKAV 109
Query: 127 EKWLLQIK 134
W Q+K
Sbjct: 110 ADWAGQVK 117
>gi|402854554|ref|XP_003891930.1| PREDICTED: ras-related protein Rab-3B [Papio anubis]
Length = 183
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 88 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 127
>gi|198436228|ref|XP_002119506.1| PREDICTED: similar to Rab3 [Ciona intestinalis]
Length = 220
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWSTQIK 121
>gi|440906879|gb|ELR57095.1| Ras-related protein Rab-3B, partial [Bos grunniens mutus]
Length = 225
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 88 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 127
>gi|348558673|ref|XP_003465141.1| PREDICTED: ras-related protein Rab-3A [Cavia porcellus]
Length = 220
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|338721709|ref|XP_001493964.2| PREDICTED: ras-related protein Rab-3B-like [Equus caballus]
Length = 219
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|110350677|ref|NP_776871.2| ras-related protein Rab-3A [Bos taurus]
gi|116242742|sp|P11023.3|RAB3A_BOVIN RecName: Full=Ras-related protein Rab-3A; AltName: Full=SMG P25A
gi|109658293|gb|AAI18279.1| RAB3A, member RAS oncogene family [Bos taurus]
gi|296486045|tpg|DAA28158.1| TPA: ras-related protein Rab-3A [Bos taurus]
Length = 220
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R++++T+ YRG +G LLI+D+T +SF ++
Sbjct: 43 TIGVEFATRSIMADNKLIKAQIWDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINI 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
+KWL +I+ H E IV M G L+ R+V D F +
Sbjct: 103 QKWLDEIR-------DHAEPHIVVMLVGNKSDLKHLRQVRQEDATAFAEKNN 147
>gi|27806113|ref|NP_776872.1| ras-related protein Rab-3B [Bos taurus]
gi|129324|sp|P10948.1|RAB3B_BOVIN RecName: Full=Ras-related protein Rab-3B; AltName: Full=SMG P25B
gi|162762|gb|AAA30417.1| GTP-binding protein [Bos taurus]
gi|113912049|gb|AAI22724.1| RAB3B, member RAS oncogene family [Bos taurus]
gi|296489056|tpg|DAA31169.1| TPA: ras-related protein Rab-3B [Bos taurus]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|149428156|ref|XP_001511148.1| PREDICTED: ras-related protein Rab-3A, partial [Ornithorhynchus
anatinus]
Length = 223
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 86 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 124
>gi|388452940|ref|NP_001253721.1| ras-related protein Rab-3B [Macaca mulatta]
gi|114556592|ref|XP_001143400.1| PREDICTED: ras-related protein Rab-3B [Pan troglodytes]
gi|332219762|ref|XP_003259028.1| PREDICTED: ras-related protein Rab-3B [Nomascus leucogenys]
gi|397518878|ref|XP_003829603.1| PREDICTED: ras-related protein Rab-3B [Pan paniscus]
gi|426329634|ref|XP_004025842.1| PREDICTED: ras-related protein Rab-3B [Gorilla gorilla gorilla]
gi|387542674|gb|AFJ71964.1| ras-related protein Rab-3B [Macaca mulatta]
gi|410207396|gb|JAA00917.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410251308|gb|JAA13621.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410298026|gb|JAA27613.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410329635|gb|JAA33764.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410329637|gb|JAA33765.1| RAB3B, member RAS oncogene family [Pan troglodytes]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|47217415|emb|CAG00775.1| unnamed protein product [Tetraodon nigroviridis]
Length = 294
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 157 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 196
>gi|19923985|ref|NP_612462.1| ras-related protein Rab-3C [Homo sapiens]
gi|388452650|ref|NP_001252924.1| ras-related protein Rab-3C [Macaca mulatta]
gi|297675313|ref|XP_002815628.1| PREDICTED: ras-related protein Rab-3C isoform 2 [Pongo abelii]
gi|332233625|ref|XP_003266004.1| PREDICTED: ras-related protein Rab-3C [Nomascus leucogenys]
gi|332821437|ref|XP_526915.3| PREDICTED: ras-related protein Rab-3C isoform 2 [Pan troglodytes]
gi|402871610|ref|XP_003899749.1| PREDICTED: ras-related protein Rab-3C [Papio anubis]
gi|23396832|sp|Q96E17.1|RAB3C_HUMAN RecName: Full=Ras-related protein Rab-3C
gi|15278255|gb|AAH13033.1| RAB3C, member RAS oncogene family [Homo sapiens]
gi|19067861|gb|AAK08968.1| Rab3c [Homo sapiens]
gi|119575373|gb|EAW54978.1| RAB3C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|355691328|gb|EHH26513.1| Ras-related protein Rab-3C [Macaca mulatta]
gi|355749935|gb|EHH54273.1| Ras-related protein Rab-3C [Macaca fascicularis]
gi|380809404|gb|AFE76577.1| ras-related protein Rab-3C [Macaca mulatta]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|397514337|ref|XP_003827446.1| PREDICTED: ras-related protein Rab-3C [Pan paniscus]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|126323469|ref|XP_001362786.1| PREDICTED: ras-related protein Rab-3A-like [Monodelphis domestica]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|50540122|ref|NP_001002530.1| ras-related protein Rab-3C [Danio rerio]
gi|49900849|gb|AAH76367.1| RAB3C, member RAS oncogene family [Danio rerio]
gi|182889398|gb|AAI65042.1| Rab3c protein [Danio rerio]
Length = 218
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 81 RYRTITTAYYRGAMGFILMYDITNEESFAAVQDWATQIKT 120
>gi|62858351|ref|NP_001016426.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273837|emb|CAJ83688.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273838|emb|CAJ83689.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134024095|gb|AAI35627.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|410918321|ref|XP_003972634.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCL 155
R+ ++TT YRG MGFLL++D+T++ SF V+ W QIK ++ + Q+V + G
Sbjct: 85 RYRTITTAYYRGAMGFLLMYDITSQESFCAVQDWATQIKT-----YSWGDAQVVLV-GNK 138
Query: 156 ELLQRCREVVTPD 168
L+ R+V T D
Sbjct: 139 ADLEEERQVPTED 151
>gi|344278706|ref|XP_003411134.1| PREDICTED: ras-related protein Rab-3B-like [Loxodonta africana]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 121
>gi|57008|emb|CAA30005.1| unnamed protein product [Rattus norvegicus]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|6679593|ref|NP_033027.1| ras-related protein Rab-3A [Mus musculus]
gi|61098195|ref|NP_037150.2| ras-related protein Rab-3A [Rattus norvegicus]
gi|178056554|ref|NP_001116651.1| ras-related protein Rab-3A [Sus scrofa]
gi|187936991|ref|NP_001120756.1| ras-related protein Rab-3A [Ovis aries]
gi|261862303|ref|NP_001159871.1| ras-related protein Rab-3A [Mus musculus]
gi|73986147|ref|XP_541942.2| PREDICTED: ras-related protein Rab-3A [Canis lupus familiaris]
gi|149757273|ref|XP_001503278.1| PREDICTED: ras-related protein Rab-3A-like [Equus caballus]
gi|301753909|ref|XP_002912772.1| PREDICTED: ras-related protein Rab-3A-like [Ailuropoda melanoleuca]
gi|344282612|ref|XP_003413067.1| PREDICTED: ras-related protein Rab-3A-like [Loxodonta africana]
gi|354473979|ref|XP_003499209.1| PREDICTED: ras-related protein Rab-3A-like [Cricetulus griseus]
gi|395847913|ref|XP_003796608.1| PREDICTED: ras-related protein Rab-3A [Otolemur garnettii]
gi|410950864|ref|XP_003982122.1| PREDICTED: ras-related protein Rab-3A [Felis catus]
gi|51702793|sp|P63012.1|RAB3A_RAT RecName: Full=Ras-related protein Rab-3A
gi|51702798|sp|P63011.1|RAB3A_MOUSE RecName: Full=Ras-related protein Rab-3A
gi|122064948|sp|Q06AU3.1|RAB3A_PIG RecName: Full=Ras-related protein Rab-3A
gi|2342528|emb|CAA51470.1| low molecular weight GTP-binding protein [Mus musculus]
gi|12837856|dbj|BAB23976.1| unnamed protein product [Mus musculus]
gi|31566349|gb|AAH53519.1| Rab3a protein [Mus musculus]
gi|56270582|gb|AAH87580.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|74177523|dbj|BAE34630.1| unnamed protein product [Mus musculus]
gi|74187365|dbj|BAE36661.1| unnamed protein product [Mus musculus]
gi|112292943|dbj|BAF02849.1| Rab3A [Mus musculus]
gi|115394766|gb|ABI97177.1| Rab-3A [Sus scrofa]
gi|148696919|gb|EDL28866.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148696920|gb|EDL28867.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036066|gb|EDL90732.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|186886450|gb|ACC93601.1| Rab3A [Ovis aries]
gi|281343531|gb|EFB19115.1| hypothetical protein PANDA_000545 [Ailuropoda melanoleuca]
gi|344241347|gb|EGV97450.1| Ras-related protein Rab-3A [Cricetulus griseus]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|12851685|dbj|BAB29132.1| unnamed protein product [Mus musculus]
gi|148686491|gb|EDL18438.1| RAB3C, member RAS oncogene family, isoform CRA_d [Mus musculus]
Length = 169
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 62 TVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAV 121
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 122 QDWSTQIK 129
>gi|449279549|gb|EMC87121.1| Ras-related protein Rab-3A, partial [Columba livia]
Length = 214
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|13470090|ref|NP_076341.1| ras-related protein Rab-3C [Mus musculus]
gi|51338595|sp|P62824.1|RAB3C_RAT RecName: Full=Ras-related protein Rab-3C
gi|51338605|sp|P62823.1|RAB3C_MOUSE RecName: Full=Ras-related protein Rab-3C
gi|12597437|gb|AAG60047.1|AF312037_1 small GTP binding protein Rab3C [Mus musculus]
gi|1304207|dbj|BAA11302.1| rab3C [Rattus norvegicus]
gi|12851806|dbj|BAB29172.1| unnamed protein product [Mus musculus]
gi|13027787|gb|AAK08980.1| small GTP-binding protein Rab3C [Mus musculus]
gi|13094065|emb|CAC32042.1| Rab3C [Mus musculus]
gi|26348082|dbj|BAC37689.1| unnamed protein product [Mus musculus]
gi|74216593|dbj|BAE37733.1| unnamed protein product [Mus musculus]
gi|74223648|dbj|BAE28694.1| unnamed protein product [Mus musculus]
gi|89130661|gb|AAI14336.1| RAB3C, member RAS oncogene family [Mus musculus]
gi|112292947|dbj|BAF02851.1| Rab3C [Mus musculus]
gi|148686488|gb|EDL18435.1| RAB3C, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149059322|gb|EDM10329.1| RAB3C, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|395818775|ref|XP_003782792.1| PREDICTED: ras-related protein Rab-3C [Otolemur garnettii]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|148686490|gb|EDL18437.1| RAB3C, member RAS oncogene family, isoform CRA_c [Mus musculus]
Length = 225
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 89 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 128
>gi|4506367|ref|NP_002857.1| ras-related protein Rab-3A [Homo sapiens]
gi|383873155|ref|NP_001244696.1| ras-related protein Rab-3A [Macaca mulatta]
gi|114676111|ref|XP_512511.2| PREDICTED: ras-related protein Rab-3A isoform 3 [Pan troglodytes]
gi|296233287|ref|XP_002761948.1| PREDICTED: ras-related protein Rab-3A [Callithrix jacchus]
gi|397493887|ref|XP_003817827.1| PREDICTED: ras-related protein Rab-3A isoform 1 [Pan paniscus]
gi|397493889|ref|XP_003817828.1| PREDICTED: ras-related protein Rab-3A isoform 2 [Pan paniscus]
gi|402904778|ref|XP_003915217.1| PREDICTED: ras-related protein Rab-3A [Papio anubis]
gi|403303431|ref|XP_003942330.1| PREDICTED: ras-related protein Rab-3A [Saimiri boliviensis
boliviensis]
gi|410053467|ref|XP_003953458.1| PREDICTED: ras-related protein Rab-3A [Pan troglodytes]
gi|426387780|ref|XP_004060340.1| PREDICTED: ras-related protein Rab-3A [Gorilla gorilla gorilla]
gi|131801|sp|P20336.1|RAB3A_HUMAN RecName: Full=Ras-related protein Rab-3A
gi|75075791|sp|Q4R4R9.1|RAB3A_MACFA RecName: Full=Ras-related protein Rab-3A
gi|7684383|gb|AAF67385.1|AC068499_1 RAB3A, member RAS oncogene family [Homo sapiens]
gi|20379038|gb|AAM21079.1|AF498931_1 small GTP binding protein RAB3A [Homo sapiens]
gi|550064|gb|AAA60242.1| GTP-binding protein [Homo sapiens]
gi|5678931|gb|AAD46811.1| GTP-binding protein [Homo sapiens]
gi|15079994|gb|AAH11782.1| RAB3A, member RAS oncogene family [Homo sapiens]
gi|67971128|dbj|BAE01906.1| unnamed protein product [Macaca fascicularis]
gi|119605078|gb|EAW84672.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605079|gb|EAW84673.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605080|gb|EAW84674.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260141|dbj|BAF82248.1| unnamed protein product [Homo sapiens]
gi|190689931|gb|ACE86740.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|190691303|gb|ACE87426.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|208967240|dbj|BAG73634.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|351701226|gb|EHB04145.1| Ras-related protein Rab-3A [Heterocephalus glaber]
gi|355703320|gb|EHH29811.1| Ras-related protein Rab-3A [Macaca mulatta]
gi|355763570|gb|EHH62193.1| Ras-related protein Rab-3A [Macaca fascicularis]
gi|380783409|gb|AFE63580.1| ras-related protein Rab-3A [Macaca mulatta]
gi|383413957|gb|AFH30192.1| ras-related protein Rab-3A [Macaca mulatta]
gi|384944492|gb|AFI35851.1| ras-related protein Rab-3A [Macaca mulatta]
gi|410216084|gb|JAA05261.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410250372|gb|JAA13153.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410295286|gb|JAA26243.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410337961|gb|JAA37927.1| RAB3A, member RAS oncogene family [Pan troglodytes]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|426228772|ref|XP_004008470.1| PREDICTED: ras-related protein Rab-3A [Ovis aries]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|147901693|ref|NP_001088531.1| RAB3A, member RAS oncogene family [Xenopus laevis]
gi|54311426|gb|AAH84880.1| Rab3a-prov protein [Xenopus laevis]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|403267520|ref|XP_003925875.1| PREDICTED: ras-related protein Rab-3C [Saimiri boliviensis
boliviensis]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|196049930|pdb|3DZ8|A Chain A, Crystal Structure Of Human Rab3b Gtpase Bound With Gdp
Length = 191
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIK 122
>gi|280967450|ref|NP_001162176.1| ras-related protein Rab-27A [Gallus gallus]
gi|326926585|ref|XP_003209479.1| PREDICTED: ras-related protein Rab-27A-like [Meleagris gallopavo]
gi|251765472|gb|ACT15614.1| Rab27a [Gallus gallus]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY------SIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y +G R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRPNGPDGVGGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|7689363|gb|AAF67748.1| GTP-binding protein RAB3A [Homo sapiens]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|354467588|ref|XP_003496251.1| PREDICTED: ras-related protein Rab-3C-like [Cricetulus griseus]
Length = 228
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 92 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 131
>gi|348500494|ref|XP_003437808.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 120
>gi|126328814|ref|XP_001373156.1| PREDICTED: ras-related protein Rab-39A-like [Monodelphis domestica]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 70 TVGIVFPAISVTYSIGPR----YFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
TVG+ F + + + GPR ++ R+ S+T YR T+G LL+FDVTN SF
Sbjct: 47 TVGVEFYSRMLQLASGPRIKLQFWDTAGDERYRSITRSFYRNTVGVLLVFDVTNRKSFNH 106
Query: 126 VEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPD 168
VE W ++ + G+ + + + G LQ+ R+V T +
Sbjct: 107 VEDWYQEVASVQGS-----DKVVFLLVGHKCDLQQARQVSTQE 144
>gi|431895979|gb|ELK05397.1| Ras-related protein Rab-27A [Pteropus alecto]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q++V
Sbjct: 101 LTNEQSFLNVRNWISQLQV 119
>gi|114052949|ref|NP_001040071.1| ras-related protein Rab-3C [Bos taurus]
gi|149732720|ref|XP_001495120.1| PREDICTED: ras-related protein Rab-3C-like [Equus caballus]
gi|426246459|ref|XP_004017011.1| PREDICTED: ras-related protein Rab-3C [Ovis aries]
gi|108935883|sp|P10949.3|RAB3C_BOVIN RecName: Full=Ras-related protein Rab-3C; AltName: Full=SMG P25C
gi|86438380|gb|AAI12796.1| RAB3C, member RAS oncogene family [Bos taurus]
gi|296475826|tpg|DAA17941.1| TPA: RAB3C, member RAS oncogene family [Bos taurus]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|410948619|ref|XP_003981028.1| PREDICTED: ras-related protein Rab-3C [Felis catus]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|350594330|ref|XP_003483878.1| PREDICTED: ras-related protein Rab-3C-like isoform 2 [Sus scrofa]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|348520842|ref|XP_003447936.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGC 154
R+ ++TT YRG MGFLL++D+T++ SF V+ W QIK ++ Q+V +
Sbjct: 84 ERYRTITTAYYRGAMGFLLMYDITSQESFCAVQDWATQIKT-----YSWDNAQVVLVANK 138
Query: 155 LELLQRCREVVTPD 168
L+ L+ R+V T D
Sbjct: 139 LD-LEDDRQVPTED 151
>gi|410921832|ref|XP_003974387.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 120
>gi|194373731|dbj|BAG56961.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 195 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 233
>gi|426384624|ref|XP_004058859.1| PREDICTED: ras-related protein Rab-3C [Gorilla gorilla gorilla]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|395510325|ref|XP_003759428.1| PREDICTED: ras-related protein Rab-3C [Sarcophilus harrisii]
Length = 227
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|355558002|gb|EHH14782.1| hypothetical protein EGK_00759 [Macaca mulatta]
gi|380787191|gb|AFE65471.1| ras-related protein Rab-3B [Macaca mulatta]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFSAVQDWATQIK 121
>gi|62955495|ref|NP_001017761.1| ras-related protein Rab-3A [Danio rerio]
gi|62203410|gb|AAH93355.1| Si:ch211-255d18.4 [Danio rerio]
gi|182890120|gb|AAI64318.1| Si:ch211-255d18.4 protein [Danio rerio]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFAAVQDWSTQIK 121
>gi|54696260|gb|AAV38502.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|61368754|gb|AAX43231.1| RAB3A member RAS oncogene family [synthetic construct]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|344235947|gb|EGV92050.1| Ras-related protein Rab-3C [Cricetulus griseus]
Length = 220
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 84 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 123
>gi|444726632|gb|ELW67156.1| Ras-related protein Rab-3A [Tupaia chinensis]
Length = 208
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|348568990|ref|XP_003470281.1| PREDICTED: ras-related protein Rab-3C-like [Cavia porcellus]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|345793828|ref|XP_851045.2| PREDICTED: ras-related protein Rab-3C [Canis lupus familiaris]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|390459930|ref|XP_002806670.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-3C-like
[Callithrix jacchus]
Length = 225
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 88 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 128
>gi|291395402|ref|XP_002714096.1| PREDICTED: RAB3C, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 219
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|431918473|gb|ELK17694.1| Ras-related protein Rab-3C [Pteropus alecto]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|19424194|ref|NP_598220.1| ras-related protein Rab-3C [Rattus norvegicus]
gi|1373214|gb|AAC52879.1| GTP-binding protein [Rattus norvegicus]
Length = 227
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|363744183|ref|XP_003642996.1| PREDICTED: ras-related protein Rab-3C [Gallus gallus]
Length = 227
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 90 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 130
>gi|301617603|ref|XP_002938225.1| PREDICTED: ras-related protein Rab-3C-like [Xenopus (Silurana)
tropicalis]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 54 TVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAV 113
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 114 QDWSTQIK 121
>gi|149059323|gb|EDM10330.1| RAB3C, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 225
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 88 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 128
>gi|395750736|ref|XP_002828966.2| PREDICTED: ras-related protein Rab-3A [Pongo abelii]
Length = 159
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|350594328|ref|XP_003359827.2| PREDICTED: ras-related protein Rab-3C-like isoform 1 [Sus scrofa]
Length = 225
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 88 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 128
>gi|296475820|tpg|DAA17935.1| TPA: ras-related protein Rab-3C [Bos taurus]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|55846766|gb|AAV67387.1| ras-associated protein rab3A [Macaca fascicularis]
Length = 194
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 58 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 97
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V ++ + + + R+ ++T+ YRG +G L++FD+T ++ V
Sbjct: 29 TIGVEFSTRTVLVGDAAVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVV 88
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL + L+ H E IV M G L + REV T + MF +
Sbjct: 89 ERWLKE-------LYDHAEASIVVMLVGNKSDLAQEREVPTEEAKMFAENK 132
>gi|327262966|ref|XP_003216293.1| PREDICTED: ras-related protein Rab-3C-like [Anolis carolinensis]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|301765878|ref|XP_002918360.1| PREDICTED: ras-related protein Rab-3C-like [Ailuropoda melanoleuca]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|221111766|ref|XP_002161131.1| PREDICTED: ras-related protein Rab-3B-like [Hydra magnipapillata]
Length = 218
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++DVTNE SFK V W Q+K
Sbjct: 83 RYRTITTAYYRGAMGFILMYDVTNEESFKAVADWAGQVK 121
>gi|449270352|gb|EMC81037.1| Ras-related protein Rab-3C [Columba livia]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T + +F++V
Sbjct: 44 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMF 172
E+WL +++ H + IV M G L+ R V T D F
Sbjct: 104 ERWLKELR-------DHADANIVIMLVGNKSDLRHLRSVQTEDAKAF 143
>gi|344272308|ref|XP_003407975.1| PREDICTED: ras-related protein Rab-3C-like [Loxodonta africana]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKT 122
>gi|126315213|ref|XP_001366023.1| PREDICTED: ras-related protein Rab-3C-like [Monodelphis domestica]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 54 TVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAV 113
Query: 127 EKWLLQIKV 135
+ W QIK
Sbjct: 114 QDWSTQIKT 122
>gi|156366233|ref|XP_001627044.1| predicted protein [Nematostella vectensis]
gi|156213941|gb|EDO34944.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF+ V+ W Q+K
Sbjct: 82 RYRTITTAYYRGAMGFILMYDITNEESFQAVQDWSTQVK 120
>gi|1045640|gb|AAC52704.1| rab3c, partial [Rattus norvegicus]
Length = 195
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 39 TVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAV 98
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 99 QDWSTQIK 106
>gi|156383574|ref|XP_001632908.1| predicted protein [Nematostella vectensis]
gi|156219971|gb|EDO40845.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
T+GI F T +G + + + RF ++TT YRG MG +L++DVTNE SF
Sbjct: 41 TIGIDFKI--KTLELGGKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFS 98
Query: 125 DVEKWLLQI 133
++ KWL +I
Sbjct: 99 NISKWLKKI 107
>gi|441628727|ref|XP_003275954.2| PREDICTED: ras-related protein Rab-3A, partial [Nomascus
leucogenys]
Length = 186
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 121
>gi|355714920|gb|AES05161.1| RAB3C, member RAS oncoprotein family [Mustela putorius furo]
Length = 80
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 21 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 60
>gi|307211001|gb|EFN87282.1| Ras-related protein Rab-27A [Harpegnathos saltator]
Length = 210
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTY-SIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F + Y + R R L RF SLTT YR +MGFLLIFD+TNE
Sbjct: 40 TVGIDFKEKRMIYRTANGRNRRVHLQLWDTAGQERFRSLTTAFYRDSMGFLLIFDLTNEL 99
Query: 122 SFKDVEKWLLQIK 134
SF +V WL ++
Sbjct: 100 SFLEVRNWLEHLR 112
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D++ +F++V
Sbjct: 44 TIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSSL 179
E+WL +++ H E IV M G L+ R V T + + F S Q +L
Sbjct: 104 ERWLKELR-------DHAEANIVVMLVGNKSDLRHLRAVETDEAMAF-SEQHNL 149
>gi|47230376|emb|CAF99569.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF +V W+ Q++V
Sbjct: 76 ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWMSQLQV 116
>gi|197725035|pdb|3BC1|A Chain A, Crystal Structure Of The Complex Rab27a-slp2a
gi|197725037|pdb|3BC1|E Chain E, Crystal Structure Of The Complex Rab27a-slp2a
Length = 195
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPL-------VSRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L + RF SLTT +R MGFLL+FD
Sbjct: 43 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFD 102
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 103 LTNEQSFLNVRNWISQLQM 121
>gi|224466272|gb|ACN44178.1| RAS oncogene family protein [Cavia porcellus]
Length = 168
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 59 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 98
>gi|242004648|ref|XP_002423192.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506157|gb|EEB10454.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 198
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE SFK++ KWL I
Sbjct: 67 ERFHTITTSYYRGAMGIMLVYDITNERSFKNIVKWLRNI 105
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 12/114 (10%)
Query: 70 TVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D++ ++F++V
Sbjct: 44 TIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSSL 179
E+WL +++ H E IV M G L+ R V T + + F S Q +L
Sbjct: 104 ERWLKELR-------DHAEANIVVMLVGNKSDLRHLRAVETDEAMAF-SEQHNL 149
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 23 KPTYRCTKVTKMTAAKEFSFNFGTQL-GRRGIP----LLKHLKYLGTGTHGKTVGIVFPA 77
K + K+ KMT +++ F + L G G+ LL+ + T+G+ F
Sbjct: 14 KDEKKILKIKKMTQ-EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFAT 72
Query: 78 ISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
S+ + I + + R+ ++T YRG +G L+++D+T EN+FK +E+WL ++K
Sbjct: 73 RSIQHEGKVIRAQIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELK 132
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H E IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTEANIVIMLVGNKADLRHLRAVSTEDAKAFAERENT 150
>gi|291415916|ref|XP_002724195.1| PREDICTED: RAB3D, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 217
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLVYDIANQESFNAVQDWATQIKT 122
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H E IV M G L+ R V T D F + +
Sbjct: 105 ERWLKELR-------DHTESNIVIMLVGNKADLRHLRAVTTEDATAFAEREKT 150
>gi|213511948|ref|NP_001133667.1| Ras-related protein Rab-3D [Salmo salar]
gi|209154872|gb|ACI33668.1| Ras-related protein Rab-3D [Salmo salar]
Length = 224
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+TN++SF V+ W QIK
Sbjct: 88 ERYRTITTAYYRGAMGFLLMYDITNQDSFYAVQDWATQIK 127
>gi|395512525|ref|XP_003760488.1| PREDICTED: ras-related protein Rab-3D [Sarcophilus harrisii]
Length = 219
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV+N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDVSNQESFNAVQDWATQIK 121
>gi|292626341|ref|XP_685654.3| PREDICTED: ras-related protein Rab-3B [Danio rerio]
Length = 217
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE S+ V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESYNAVQDWATQIK 120
>gi|334326343|ref|XP_001364610.2| PREDICTED: hypothetical protein LOC100011001 [Monodelphis
domestica]
Length = 510
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV+N+ SF V+ W QIK
Sbjct: 374 RYRTITTAYYRGAMGFLLMYDVSNQESFNAVQDWATQIK 412
>gi|348677661|gb|EGZ17478.1| hypothetical protein PHYSODRAFT_351206 [Phytophthora sojae]
Length = 207
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F ++ I + + RF ++TT YRG MG LL++DVT+++SF+++
Sbjct: 42 TIGIDFKVKTIDVDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNI 101
Query: 127 EKWLLQIK 134
W+ QI+
Sbjct: 102 RNWMTQIR 109
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDEKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H E IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTEANIVIMLVGNKADLRHLRAVSTEDAKAFAERENT 150
>gi|4930237|pdb|3RAB|A Chain A, Gppnhp-bound Rab3a At 2.0 A Resolution
Length = 169
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W QIK
Sbjct: 65 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 104
>gi|158634606|gb|ABW76149.1| Rab3 [Aiptasia pulchella]
Length = 221
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF+ V+ W Q+K
Sbjct: 82 RYRTITTAYYRGAMGFILMYDITNEESFQAVQDWSSQVK 120
>gi|156554564|ref|XP_001605676.1| PREDICTED: ras-related protein Rab-27A-like [Nasonia vitripennis]
Length = 211
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 70 TVGIVFPAISVTYSIG---PRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNEN 121
TVGI F V + P+ + L RF SLTT YR +MGF L+FD+TNE
Sbjct: 38 TVGIDFKEKRVVHKSANGQPQTVQLQLWDTAGQERFRSLTTAFYRESMGFFLLFDLTNEQ 97
Query: 122 SFKDVEKWLLQIK 134
SF V WL Q++
Sbjct: 98 SFLAVRDWLDQLR 110
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 70 TVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D++ +F++V
Sbjct: 44 TIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSSL 179
E+WL +++ H E IV M G L+ R V T + + F S Q +L
Sbjct: 104 ERWLKELR-------DHAEANIVVMLVGNKSDLRHLRAVETDEAMAF-SEQHNL 149
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ Y +I + + R+ ++T YRG +G L+++D+T + SF+ V
Sbjct: 42 TIGVEFATRSINYCDKNIRAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESV 101
Query: 127 EKWLLQI-KVMDGALFTHFELQIVFMRGCLELLQRCREVVTPD 168
EKWL ++ + D + +Q+V C L + REV T +
Sbjct: 102 EKWLAELHENADKKV-----VQMVIGNKC--DLNQTREVQTSE 137
>gi|432873564|ref|XP_004072279.1| PREDICTED: ras-related protein Rab-3C-like [Oryzias latipes]
Length = 219
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V + I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 53 TVGIDFKVKTVYKNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFGAV 112
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 113 QDWSTQIK 120
>gi|410913109|ref|XP_003970031.1| PREDICTED: ras-related protein Rab-27A-like [Takifugu rubripes]
Length = 220
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF +V W+ Q++V
Sbjct: 80 RFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWMSQLQV 119
>gi|321466857|gb|EFX77850.1| hypothetical protein DAPPUDRAFT_231118 [Daphnia pulex]
Length = 224
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY------SIGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + R R L RF SLTT +R +MGFLL+FD
Sbjct: 48 TVGIDFREKRVVYRAKNSEGMQGRSQRIHLQLWDTAGQERFRSLTTAFFRDSMGFLLLFD 107
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF + WL Q+K
Sbjct: 108 LTNEQSFLSIRSWLEQLKT 126
>gi|380795961|gb|AFE69856.1| ras-related protein Rab-27A, partial [Macaca mulatta]
Length = 201
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 21 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 80
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 81 LTNEQSFLNVRNWISQLQM 99
>gi|325181448|emb|CCA15868.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2066
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1429 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1468
>gi|325181452|emb|CCA15877.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2062
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1401 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1440
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
EKWL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 EKWLKELR-------DHTDANIVIMLVGNKADLRHLRAVSTDDAKAFAERENT 150
>gi|328793458|ref|XP_003251880.1| PREDICTED: ras-related protein Rab-8A-like [Apis mellifera]
Length = 152
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 10 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 49
>gi|325181454|emb|CCA15881.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2006
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1345 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1384
>gi|325181453|emb|CCA15878.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2038
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1401 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1440
>gi|325181450|emb|CCA15872.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2011
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1374 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1413
>gi|344283301|ref|XP_003413410.1| PREDICTED: ras-related protein Rab-3D-like [Loxodonta africana]
Length = 371
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 235 RYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKT 274
>gi|325181455|emb|CCA15884.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2025
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1372 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1411
>gi|325181451|emb|CCA15876.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1426 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1465
>gi|325181449|emb|CCA15870.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2027
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1374 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1413
>gi|325181447|emb|CCA15867.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+++SF+++ W+ QIK
Sbjct: 1402 ERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIK 1441
>gi|47212241|emb|CAF95016.1| unnamed protein product [Tetraodon nigroviridis]
Length = 248
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCL 155
R+ ++TT YRG MGFLL++D+T++ SF V+ W QIK ++ Q+V + +
Sbjct: 112 RYRTITTAYYRGAMGFLLMYDITSQESFCAVQDWATQIKT-----YSWGNAQVVLVGNKV 166
Query: 156 ELLQRCREVVTPD 168
+L + R+V T D
Sbjct: 167 DLEEE-RQVPTED 178
>gi|410923383|ref|XP_003975161.1| PREDICTED: ras-related protein Rab-27B-like [Takifugu rubripes]
Length = 213
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYS------IGPRYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ + R FR L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVMYTGTGVDGMTERNFRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TN SF +V W+ Q++
Sbjct: 101 LTNRQSFLNVRNWMSQLQA 119
>gi|357630896|gb|EHJ78715.1| small GTP binding protein RAB8 [Danaus plexippus]
Length = 209
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG+MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +S+
Sbjct: 105 ERWLKELR-------DHTDSNIVIMLVGNKADLRHLRAVTTEDAKAFAEREST 150
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT +++++V
Sbjct: 45 TIGVEFATRSLNLDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
EKWL +++ H + IV M G L+ V T D F T+S
Sbjct: 105 EKWLKELR-------DHTDPNIVVMLVGNKSDLRHLVAVSTEDAKSFAETES 149
>gi|313238005|emb|CBY13126.1| unnamed protein product [Oikopleura dioica]
Length = 177
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Query: 70 TVGIVFPAISVTY-------SIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDV 117
TVGI F VTY S P L RF SLTT YR MGFLL+FD+
Sbjct: 35 TVGIDFREKRVTYTSRNGEKSTQPFKVHLQLWDTAGQERFRSLTTAFYRDAMGFLLVFDL 94
Query: 118 TNENSFKDVEKWLLQIK 134
T+E SF + WL Q++
Sbjct: 95 TSEQSFLNTRNWLSQLE 111
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 7/56 (12%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM 151
R+ ++T+ YRG +G LL++DVTN+++F +VEKWL +++ H + IV M
Sbjct: 72 RYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELR-------DHADANIVIM 120
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S++ S I + + R+ ++T+ YRG +G +L++D+TN+ SF+ V
Sbjct: 43 TIGVEFATRSISISGKIIKAQIWDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESV 102
Query: 127 EKWLLQIK 134
E+W+ +++
Sbjct: 103 ERWIQEVR 110
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F D+ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI 107
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++KW+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKKWIRNIE 107
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F +V I + + RF ++TT YRG MG +L++D+TNE +F D+
Sbjct: 41 TIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI 100
Query: 127 EKWLLQI 133
KWL I
Sbjct: 101 VKWLRNI 107
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|47217500|emb|CAG10880.1| unnamed protein product [Tetraodon nigroviridis]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V + I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 55 TVGIDFKVKTVYKNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFGAV 114
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 115 QDWSTQIK 122
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ Y +I + + R+ ++T YRG +G L+++D+T + SF+ V
Sbjct: 42 TIGVEFATRSINYCDKNIRAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESV 101
Query: 127 EKWLLQI-KVMDGALFTHFELQIVFMRGCLELLQRCREVVTPD 168
EKWL ++ + D + +Q+V C L + REV T +
Sbjct: 102 EKWLAELHENADKKV-----VQMVIGNKC--DLSQTREVQTSE 137
>gi|449268202|gb|EMC79072.1| Ras-related protein Rab-3B [Columba livia]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T+E+SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQIK 121
>gi|348550975|ref|XP_003461306.1| PREDICTED: ras-related protein Rab-3D-like [Cavia porcellus]
Length = 363
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 227 RYRTITTAYYRGAMGFLLVYDIANQESFTAVQDWATQIKT 266
>gi|440897484|gb|ELR49160.1| hypothetical protein M91_14795 [Bos grunniens mutus]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + I + + R+ ++T YRG +G L+++D+T EN+FK +
Sbjct: 40 TIGVEFATRSIQHEGKVIRAQIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSI 99
Query: 127 EKWLLQIK 134
E+WL ++K
Sbjct: 100 ERWLSELK 107
>gi|405964683|gb|EKC30136.1| Ras-related protein Rab-3 [Crassostrea gigas]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V + + + R+ ++TT YRG MGF+L++DVTNE SF V
Sbjct: 53 TVGIDFKVKTVFRQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFNAV 112
Query: 127 EKWLLQIK 134
W QIK
Sbjct: 113 MDWCTQIK 120
>gi|348517184|ref|XP_003446115.1| PREDICTED: ras-related protein Rab-3C-like [Oreochromis niloticus]
Length = 218
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V + I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 52 TVGIDFKVKTVYKNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFGAV 111
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 112 QDWSTQIK 119
>gi|19923264|ref|NP_004571.2| ras-related protein Rab-27A [Homo sapiens]
gi|34485706|ref|NP_899057.1| ras-related protein Rab-27A [Homo sapiens]
gi|34485709|ref|NP_899058.1| ras-related protein Rab-27A [Homo sapiens]
gi|34485711|ref|NP_899059.1| ras-related protein Rab-27A [Homo sapiens]
gi|116242744|sp|P51159.3|RB27A_HUMAN RecName: Full=Ras-related protein Rab-27A; Short=Rab-27; AltName:
Full=GTP-binding protein Ram
gi|17432607|gb|AAL39097.1|AF443871_1 Ras-like GTP-binding protein [Homo sapiens]
gi|20379082|gb|AAM21101.1|AF498953_1 small GTP binding protein RAB27A [Homo sapiens]
gi|4572590|gb|AAC50271.2| Rab27a [Homo sapiens]
gi|5712736|gb|AAD47629.1| Ras-like GTP-binding protein [Homo sapiens]
gi|49168480|emb|CAG38735.1| RAB27A [Homo sapiens]
gi|49456347|emb|CAG46494.1| RAB27A [Homo sapiens]
gi|78070788|gb|AAI07681.1| RAB27A, member RAS oncogene family [Homo sapiens]
gi|119597882|gb|EAW77476.1| RAB27A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119597883|gb|EAW77477.1| RAB27A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119597884|gb|EAW77478.1| RAB27A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119597885|gb|EAW77479.1| RAB27A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|124376892|gb|AAI32801.1| RAB27A, member RAS oncogene family [Homo sapiens]
gi|189053524|dbj|BAG35690.1| unnamed protein product [Homo sapiens]
gi|223460476|gb|AAI36424.1| RAB27A, member RAS oncogene family [Homo sapiens]
gi|313882796|gb|ADR82884.1| RAB27A, member RAS oncogene family (RAB27A), transcript variant 4
[synthetic construct]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|302564361|ref|NP_001180784.1| ras-related protein Rab-27A [Macaca mulatta]
gi|109081224|ref|XP_001089429.1| PREDICTED: ras-related protein Rab-27A-like isoform 2 [Macaca
mulatta]
gi|355692732|gb|EHH27335.1| Ras-related protein Rab-27A [Macaca mulatta]
gi|355778060|gb|EHH63096.1| Ras-related protein Rab-27A [Macaca fascicularis]
gi|383414485|gb|AFH30456.1| ras-related protein Rab-27A [Macaca mulatta]
gi|384940718|gb|AFI33964.1| ras-related protein Rab-27A [Macaca mulatta]
gi|387541138|gb|AFJ71196.1| ras-related protein Rab-27A [Macaca mulatta]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|112982896|ref|NP_001037576.1| small GTP binding protein RAB8 [Bombyx mori]
gi|95102574|gb|ABF51225.1| small GTP binding protein RAB8 [Bombyx mori]
gi|102993217|gb|ABF71468.1| ras-related GTP-binding protein Rab8 [Bombyx mori]
Length = 210
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG+MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|71834648|ref|NP_001025428.1| ras-related protein Rab-27A [Danio rerio]
gi|66910492|gb|AAH97191.1| Zgc:114135 [Danio rerio]
Length = 222
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y S GP R R + RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYKSSGPDGTAGRGQRIHIQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q++
Sbjct: 101 LTNEQSFLNVRNWMSQLQT 119
>gi|60835441|gb|AAX37139.1| RAB27A member RAS oncogene family [synthetic construct]
gi|60835467|gb|AAX37140.1| RAB27A member RAS oncogene family [synthetic construct]
Length = 222
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|346987769|gb|AEO51738.1| Rab8 [Helicoverpa armigera]
Length = 203
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG+MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|296478104|tpg|DAA20219.1| TPA: RAB27A-like [Bos taurus]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFRENRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|149691929|ref|XP_001501079.1| PREDICTED: ras-related protein Rab-27A-like [Equus caballus]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|1419154|emb|CAA65716.1| putative GTP-binding protein [Petunia x hybrida]
Length = 91
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RG 153
R+ ++T+ YRG +G LL++DVT SF++VE+WL +++ H + IV M G
Sbjct: 7 ERYRAITSAYYRGAVGALLVYDVTRHVSFENVERWLKELR-------DHTDSNIVIMLVG 59
Query: 154 CLELLQRCREVVTPDQIMFGSTQSS 178
L+ R V + D F +S+
Sbjct: 60 NKADLRHLRAVWSEDAKAFAEKEST 84
>gi|332235604|ref|XP_003266996.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Nomascus
leucogenys]
gi|332235606|ref|XP_003266997.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Nomascus
leucogenys]
gi|332235608|ref|XP_003266998.1| PREDICTED: ras-related protein Rab-27A isoform 3 [Nomascus
leucogenys]
gi|441615192|ref|XP_004088277.1| PREDICTED: ras-related protein Rab-27A [Nomascus leucogenys]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|326925412|ref|XP_003208909.1| PREDICTED: ras-related protein Rab-3B-like [Meleagris gallopavo]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T+E+SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQIK 121
>gi|296214062|ref|XP_002753503.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Callithrix
jacchus]
gi|390468679|ref|XP_003733977.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Callithrix
jacchus]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|380023910|ref|XP_003695752.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Apis florea]
Length = 186
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 45 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 84
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + I + + R+ ++T YRG +G L+++D+T EN+FK +
Sbjct: 41 TIGVEFATRSIQHEGKVIRAQIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSI 100
Query: 127 EKWLLQIK 134
E+WL ++K
Sbjct: 101 ERWLSELK 108
>gi|13128964|ref|NP_076124.1| ras-related protein Rab-27A [Mus musculus]
gi|20178060|sp|Q9ERI2.1|RB27A_MOUSE RecName: Full=Ras-related protein Rab-27A
gi|10945661|gb|AAG24638.1| RAB27A [Mus musculus]
gi|12845770|dbj|BAB26891.1| unnamed protein product [Mus musculus]
gi|14198228|gb|AAH08173.1| Rab27a protein [Mus musculus]
gi|15054454|dbj|BAB62313.1| Rab27A [Mus musculus]
gi|16307138|gb|AAH09656.1| RAB27A, member RAS oncogene family [Mus musculus]
gi|26326523|dbj|BAC27005.1| unnamed protein product [Mus musculus]
gi|34850465|dbj|BAC87831.1| Rab27A [Mus musculus]
gi|112293013|dbj|BAF02884.1| Rab27A [Mus musculus]
gi|148694338|gb|EDL26285.1| RAB27A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148694339|gb|EDL26286.1| RAB27A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148694340|gb|EDL26287.1| RAB27A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|410922738|ref|XP_003974839.1| PREDICTED: ras-related protein Rab-3C-like [Takifugu rubripes]
Length = 219
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V + I + + R+ ++TT YRG MGF+L++D+TNE SF V
Sbjct: 53 TVGIDFKVKTVYKNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFGAV 112
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 113 QDWSTQIK 120
>gi|348572112|ref|XP_003471838.1| PREDICTED: ras-related protein Rab-27A-like [Cavia porcellus]
Length = 220
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRASGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|354465202|ref|XP_003495069.1| PREDICTED: ras-related protein Rab-27A-like [Cricetulus griseus]
gi|344243771|gb|EGV99874.1| Ras-related protein Rab-27A [Cricetulus griseus]
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|241077|gb|AAB20687.1| synaptic vesicle specific GTP-binding protein [Discopyge ommata]
Length = 218
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+TN++SF V W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDITNQDSFGAVHDWATQIK 121
>gi|8394142|ref|NP_059013.1| ras-related protein Rab-27A [Rattus norvegicus]
gi|131838|sp|P23640.1|RB27A_RAT RecName: Full=Ras-related protein Rab-27A; Short=Rab-27; AltName:
Full=GTP-binding protein Ram; AltName: Full=Ram p25
gi|452229|dbj|BAA04167.1| low Mr GTP-binding protein [Rattus sp.]
gi|68534738|gb|AAH98667.1| RAB27A, member RAS oncogene family [Rattus norvegicus]
gi|149028767|gb|EDL84108.1| RAB27A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149028768|gb|EDL84109.1| RAB27A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149028769|gb|EDL84110.1| RAB27A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|227333|prf||1702217A GTP binding protein ram
Length = 221
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|344293318|ref|XP_003418371.1| PREDICTED: ras-related protein Rab-27A-like [Loxodonta africana]
Length = 221
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEESFLNVRNWISQLQM 119
>gi|402874376|ref|XP_003901015.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Papio anubis]
gi|402874378|ref|XP_003901016.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Papio anubis]
gi|402874380|ref|XP_003901017.1| PREDICTED: ras-related protein Rab-27A isoform 3 [Papio anubis]
gi|402874382|ref|XP_003901018.1| PREDICTED: ras-related protein Rab-27A isoform 4 [Papio anubis]
Length = 221
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|118094547|ref|XP_422470.2| PREDICTED: ras-related protein Rab-3C [Gallus gallus]
Length = 219
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T+E+SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQIK 121
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + I + + R+ ++T YRG +G L+++D+T EN+FK +
Sbjct: 41 TIGVEFATRSIQHEGKVIRAQIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSI 100
Query: 127 EKWLLQIK 134
E+WL ++K
Sbjct: 101 ERWLSELK 108
>gi|55642165|ref|XP_510426.1| PREDICTED: ras-related protein Rab-27A isoform 10 [Pan troglodytes]
gi|114657146|ref|XP_001170867.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Pan troglodytes]
gi|114657155|ref|XP_001170951.1| PREDICTED: ras-related protein Rab-27A isoform 6 [Pan troglodytes]
gi|114657161|ref|XP_001170998.1| PREDICTED: ras-related protein Rab-27A isoform 9 [Pan troglodytes]
gi|410217778|gb|JAA06108.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410217780|gb|JAA06109.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410217782|gb|JAA06110.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410217784|gb|JAA06111.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410249310|gb|JAA12622.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410249312|gb|JAA12623.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410249314|gb|JAA12624.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410249316|gb|JAA12625.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410295424|gb|JAA26312.1| RAB27A, member RAS oncogene family [Pan troglodytes]
Length = 221
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|126305656|ref|XP_001362429.1| PREDICTED: ras-related protein Rab-3B-like [Monodelphis domestica]
Length = 220
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+ NE SF V+ W QIK
Sbjct: 83 ERYRTITTAYYRGAMGFILMYDIANEESFNAVQDWATQIK 122
>gi|417397377|gb|JAA45722.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 221
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAAGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|397515342|ref|XP_003827912.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Pan paniscus]
gi|397515344|ref|XP_003827913.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Pan paniscus]
gi|397515346|ref|XP_003827914.1| PREDICTED: ras-related protein Rab-27A isoform 3 [Pan paniscus]
gi|397515348|ref|XP_003827915.1| PREDICTED: ras-related protein Rab-27A isoform 4 [Pan paniscus]
gi|426379155|ref|XP_004056269.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Gorilla gorilla
gorilla]
gi|426379157|ref|XP_004056270.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Gorilla gorilla
gorilla]
gi|426379159|ref|XP_004056271.1| PREDICTED: ras-related protein Rab-27A isoform 3 [Gorilla gorilla
gorilla]
gi|426379161|ref|XP_004056272.1| PREDICTED: ras-related protein Rab-27A isoform 4 [Gorilla gorilla
gorilla]
gi|410333263|gb|JAA35578.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410333265|gb|JAA35579.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410333267|gb|JAA35580.1| RAB27A, member RAS oncogene family [Pan troglodytes]
gi|410333269|gb|JAA35581.1| RAB27A, member RAS oncogene family [Pan troglodytes]
Length = 221
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|426233276|ref|XP_004010643.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Ovis aries]
gi|426233278|ref|XP_004010644.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Ovis aries]
gi|192758053|gb|ACF04949.1| RAB27A [Ovis aries]
gi|212276819|gb|ACJ22856.1| Rab27a [Capra hircus]
Length = 221
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|426387223|ref|XP_004060073.1| PREDICTED: ras-related protein Rab-3D [Gorilla gorilla gorilla]
Length = 219
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIK 121
>gi|302563381|ref|NP_001181198.1| ras-related protein Rab-3D [Macaca mulatta]
gi|332253338|ref|XP_003275802.1| PREDICTED: ras-related protein Rab-3D [Nomascus leucogenys]
gi|402904261|ref|XP_003914965.1| PREDICTED: ras-related protein Rab-3D [Papio anubis]
gi|380786233|gb|AFE64992.1| ras-related protein Rab-3D [Macaca mulatta]
gi|383414467|gb|AFH30447.1| ras-related protein Rab-3D [Macaca mulatta]
gi|384944474|gb|AFI35842.1| ras-related protein Rab-3D [Macaca mulatta]
Length = 219
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIK 121
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ QI+
Sbjct: 74 ERFRTITTAYYRGAMGILLVYDVTDEQSFNNIRNWMRQIQ 113
>gi|351710032|gb|EHB12951.1| Ras-related protein Rab-3D [Heterocephalus glaber]
Length = 242
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D++N+ SF V+ W QIK
Sbjct: 105 ERYRTITTAYYRGAMGFLLMYDISNQESFAAVQDWATQIK 144
>gi|296232933|ref|XP_002761799.1| PREDICTED: ras-related protein Rab-3D [Callithrix jacchus]
gi|403302366|ref|XP_003941831.1| PREDICTED: ras-related protein Rab-3D [Saimiri boliviensis
boliviensis]
Length = 219
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIK 121
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVVMLVGNKADLRHLRAVSTEDSTAFAERENT 150
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +NSF++
Sbjct: 43 TIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFEN 102
Query: 126 VEKWLLQIK 134
+EKWL +++
Sbjct: 103 IEKWLKELR 111
>gi|148227658|ref|NP_001087958.1| RAB27A, member RAS oncogene family [Xenopus laevis]
gi|52078448|gb|AAH82420.1| LOC494641 protein [Xenopus laevis]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y S GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRSNGPDGNTGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T+E SF +V W+ Q++V
Sbjct: 101 LTSEQSFLNVRNWMSQLQV 119
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDSNIVIMLVGNKADLRHLRAVTTEDATAFAERENT 150
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|126277201|ref|XP_001368456.1| PREDICTED: ras-related protein Rab-27A-like [Monodelphis domestica]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGATGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +NSF++
Sbjct: 43 TIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFEN 102
Query: 126 VEKWLLQIK 134
+EKWL +++
Sbjct: 103 IEKWLKELR 111
>gi|440910159|gb|ELR59985.1| Ras-related protein Rab-3D, partial [Bos grunniens mutus]
Length = 222
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 86 RYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIK 124
>gi|395502828|ref|XP_003755776.1| PREDICTED: ras-related protein Rab-27A [Sarcophilus harrisii]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|195567831|ref|XP_002107462.1| GD17482 [Drosophila simulans]
gi|194204869|gb|EDX18445.1| GD17482 [Drosophila simulans]
Length = 117
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE SF+++ KWL I
Sbjct: 31 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 69
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|291190367|ref|NP_001167363.1| ras-related protein Rab-3B [Salmo salar]
gi|223649442|gb|ACN11479.1| Ras-related protein Rab-3B [Salmo salar]
Length = 219
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+ NE SF V+ W QIK
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDICNEESFNAVQDWATQIK 120
>gi|291402970|ref|XP_002717760.1| PREDICTED: Ras-related protein Rab-27A-like [Oryctolagus cuniculus]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F ++ I + + RF ++TT YRG MG L+++DVT+++SF+++
Sbjct: 42 TIGIDFKVKTIDVDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNI 101
Query: 127 EKWLLQIK 134
W+ QI+
Sbjct: 102 RNWMTQIR 109
>gi|449513485|ref|XP_002199423.2| PREDICTED: ras-related protein Rab-3B-like, partial [Taeniopygia
guttata]
Length = 89
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T+E+SF V+ W QIK
Sbjct: 14 ERYRTITTAYYRGAMGFVLMYDITSEDSFNAVQDWATQIK 53
>gi|155372255|ref|NP_001094740.1| ras-related protein Rab-27A [Bos taurus]
gi|151554931|gb|AAI47902.1| RAB27A protein [Bos taurus]
gi|296483178|tpg|DAA25293.1| TPA: Ras-related protein Rab-27A [Bos taurus]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|410961195|ref|XP_003987169.1| PREDICTED: ras-related protein Rab-27A [Felis catus]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|355714884|gb|AES05149.1| RAB27A, member RAS oncoprotein family [Mustela putorius furo]
Length = 220
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|301775152|ref|XP_002922991.1| PREDICTED: ras-related protein Rab-27A-like [Ailuropoda
melanoleuca]
gi|281353359|gb|EFB28943.1| hypothetical protein PANDA_012061 [Ailuropoda melanoleuca]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|224058186|ref|XP_002197150.1| PREDICTED: ras-related protein Rab-3B [Taeniopygia guttata]
Length = 219
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T+E+SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFVLMYDITSEDSFNAVQDWATQIK 121
>gi|395840297|ref|XP_003792998.1| PREDICTED: ras-related protein Rab-27A-like [Otolemur garnettii]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF SL T +RG MGFLL+FD+TNE SF +V W+ Q++
Sbjct: 79 ERFRSLATAFFRGAMGFLLLFDLTNEQSFLNVRNWITQLQ 118
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D++ ++SF +V
Sbjct: 43 TIGVEFATRSLEVDQKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKQSSFANV 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSSL 179
E+WL ++K H + IV M G L+ R V T + + +S L
Sbjct: 103 ERWLKELK-------DHADSNIVIMLVGNKSDLKHLRAVPTAEAQSYTEEKSKL 149
>gi|380023908|ref|XP_003695751.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Apis florea]
Length = 208
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 67 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 106
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|114326367|ref|NP_001041595.1| ras-related protein Rab-27A [Canis lupus familiaris]
gi|116255984|sp|Q1HE58.1|RB27A_CANFA RecName: Full=Ras-related protein Rab-27A
gi|94982822|gb|ABF50191.1| RAS oncogene family member transcript variant 1 [Canis lupus
familiaris]
Length = 221
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+T S + + + R+ ++T YRG +G +L++D+TN+ SF+ V
Sbjct: 43 TIGVEFATRSITISGKVVKAQIWDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAV 102
Query: 127 EKWLLQIK 134
E+W+ +++
Sbjct: 103 EQWIQEVR 110
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ Y +I + + R+ ++T YRG +G L+++D+T + SF+ V
Sbjct: 42 TIGVEFATRSINYCDKNIRAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESV 101
Query: 127 EKWLLQI-KVMDGALFTHFELQIVFMRGCLELLQRCREVVTPD 168
EKWL ++ + D + +Q+V C L + REV T +
Sbjct: 102 EKWLAELHENADKKV-----VQMVIGNKC--DLSQTREVQTTE 137
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|327264043|ref|XP_003216826.1| PREDICTED: ras-related protein Rab-3D-like [Anolis carolinensis]
Length = 220
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGFLL++D++N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDISNQESFSAVQDWATQIKT 122
>gi|300798495|ref|NP_001178304.1| ras-related protein Rab-3D [Bos taurus]
gi|426229005|ref|XP_004008584.1| PREDICTED: ras-related protein Rab-3D [Ovis aries]
gi|296485855|tpg|DAA27970.1| TPA: RAB3D, member RAS oncogene family-like [Bos taurus]
Length = 219
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIK 121
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVIMLVGNKADLRHLRAVATNDAKAFAERENT 150
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F A S+ Y +I + + RF +++ YRG G L+++D+TN+ SF ++
Sbjct: 38 TIGVEFGAKSIEYDGVTIKGQIWDTAGQERFRAISAAYYRGANGALIVYDITNQESFDNL 97
Query: 127 EKWLLQIK 134
EKW +I+
Sbjct: 98 EKWFKEIE 105
>gi|443711048|gb|ELU04995.1| hypothetical protein CAPTEDRAFT_19151 [Capitella teleta]
Length = 204
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGA 139
RF +LTT YRG G LL+FD+TNE+SF + WL I+ M A
Sbjct: 70 ERFRTLTTAYYRGAQGILLVFDITNEDSFSHLSYWLKNIEEMGSA 114
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 35 TIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 94
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 95 ERWLKELR-------DHTDANIVVMLVGNKADLRHLRAVSTEDSTAFAERENT 140
>gi|348509548|ref|XP_003442310.1| PREDICTED: ras-related protein Rab-27A-like [Oreochromis niloticus]
Length = 220
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF +V W+ Q+++
Sbjct: 80 RFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRHWMSQLQI 119
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + +I + + R+ ++T+ YRG +G LL++D++ E +F +V
Sbjct: 41 TIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNV 100
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGS 174
++WL +++ H + IV M G L+ R V T D F +
Sbjct: 101 QRWLKELR-------DHADTNIVIMLVGNKSDLRHLRAVPTDDAKAFAA 142
>gi|57101400|ref|XP_533913.1| PREDICTED: ras-related protein Rab-3D [Canis lupus familiaris]
Length = 219
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIK 121
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIE 107
>gi|407866593|gb|EKG08335.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 38 TIGMDFKYCQSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRASF 97
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGSTQ 176
+DV++W +++ + V + GC L+L+Q RE V I GS +
Sbjct: 98 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDIGISLGSQR 143
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +F++V
Sbjct: 44 TIGVEFATRSINVDGKMIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H E IV M G L+ R V T D F +
Sbjct: 104 ERWLKELR-------DHTEHNIVVMLVGNKSDLRHLRAVSTEDAQTFAERE 147
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 70 TVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F +V I + + RF ++TT YRG MG +L++D+TNE SF+++
Sbjct: 41 TIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENI 100
Query: 127 EKWLLQI 133
KWL I
Sbjct: 101 VKWLRNI 107
>gi|348535640|ref|XP_003455307.1| PREDICTED: ras-related protein Rab-27B-like [Oreochromis niloticus]
Length = 250
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 57 KHLKYLGTGTHGKTVGIVFPAISVTYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFD 116
K + Y GTG G A + + + + RF SLTT +R MGFLL+FD
Sbjct: 81 KRVVYTGTGVDG--------ATEKNFRVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 132
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TN+ SF +V W+ Q++
Sbjct: 133 LTNQQSFLNVRNWMSQLQA 151
>gi|387017936|gb|AFJ51086.1| ras-related protein Rab-3D-like [Crotalus adamanteus]
Length = 220
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D++N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDISNQESFSAVQDWATQIK 121
>gi|73853886|ref|NP_001027528.1| ras-related protein Rab-27A [Sus scrofa]
gi|116256437|sp|Q4LE85.1|RB27A_PIG RecName: Full=Ras-related protein Rab-27A
gi|68445606|dbj|BAE03308.1| member RAS oncogene family, RAB27A [Sus scrofa]
Length = 221
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVNIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|145537003|ref|XP_001454218.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834534|emb|CAI44575.1| rab_A16 [Paramecium tetraurelia]
gi|124421973|emb|CAK86821.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 66 THGKTVGIVFPAISVTYS-----IGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIF 115
THGK++ V + V +S + + + L R+ SLT G YRG +G L++F
Sbjct: 30 THGKSITNVKQTLGVEFSAKIIQVKQKKIKMQLWDTAGQERYRSLTKGYYRGALGSLIVF 89
Query: 116 DVTNENSFKDVEKWL 130
DVTN +SF+ +++W+
Sbjct: 90 DVTNSDSFEALKEWI 104
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +NSF++
Sbjct: 43 TIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFEN 102
Query: 126 VEKWLLQIK 134
+EKWL +++
Sbjct: 103 IEKWLKELR 111
>gi|395822218|ref|XP_003784419.1| PREDICTED: ras-related protein Rab-27A-like [Otolemur garnettii]
Length = 221
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIK 134
+TNE SF +V W+ Q++
Sbjct: 101 LTNEQSFLNVRNWISQLQ 118
>gi|195163385|ref|XP_002022531.1| GL13084 [Drosophila persimilis]
gi|194104523|gb|EDW26566.1| GL13084 [Drosophila persimilis]
Length = 170
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 64 TGTHGKTVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T T T+GI F +V I + + RF ++TT YRG MG +L++D+TNE
Sbjct: 35 TSTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNE 94
Query: 121 NSFKDVEKWLLQI 133
SF+++ KWL I
Sbjct: 95 KSFENIVKWLRNI 107
>gi|356493753|gb|AET13995.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493755|gb|AET13996.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493757|gb|AET13997.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493759|gb|AET13998.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493761|gb|AET13999.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493763|gb|AET14000.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493765|gb|AET14001.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493767|gb|AET14002.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493769|gb|AET14003.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493771|gb|AET14004.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493773|gb|AET14005.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493775|gb|AET14006.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493777|gb|AET14007.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493779|gb|AET14008.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493781|gb|AET14009.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493783|gb|AET14010.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
Length = 184
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 9 TIGMDFKYCHSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRVSF 68
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGS 174
+DV++W +++ + V + GC L+L+Q RE V I GS
Sbjct: 69 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDXGISLGS 112
>gi|432099579|gb|ELK28720.1| Ras-related protein Rab-3D [Myotis davidii]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDVANQESFTAVQDWATQIK 121
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDTNIVVMLVGNKADLRHLRAVSTEDSTAFAERENT 150
>gi|1931577|gb|AAC51195.1| Rab27a [Homo sapiens]
Length = 221
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFRPKRVVYRASGPDGPVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 1896 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 1935
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|301771968|ref|XP_002921400.1| PREDICTED: ras-related protein Rab-3D-like [Ailuropoda melanoleuca]
gi|281337382|gb|EFB12966.1| hypothetical protein PANDA_010292 [Ailuropoda melanoleuca]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDVANQESFTAVQDWATQIK 121
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 36 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 95
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 96 KSFENIQNWMKSIK 109
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ S+TT YRG +G LLI+D+T SF ++
Sbjct: 45 TIGVEFATRSIITDNKLIKAQIWDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNI 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQS 177
+KWL +I+ H E IV M G L+ R+V + +F +
Sbjct: 105 QKWLNEIR-------DHAEPHIVIMLVGNKSDLKHLRQVKQEEATLFAENNN 149
>gi|119573630|gb|EAW53245.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573631|gb|EAW53246.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573632|gb|EAW53247.1| hCG1996054, isoform CRA_d [Homo sapiens]
Length = 166
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
T+GI F ++ IG + + + RF ++TT YRG MG LL++DVT+E SF
Sbjct: 43 TIGIDFKIRTI--DIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFN 100
Query: 125 DVEKWLLQIK 134
++E W ++
Sbjct: 101 NIENWYQNVQ 110
>gi|356493721|gb|AET13979.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493723|gb|AET13980.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493725|gb|AET13981.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493727|gb|AET13982.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493729|gb|AET13983.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493731|gb|AET13984.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493733|gb|AET13985.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
Length = 184
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 9 TIGMDFKYCQSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRASF 68
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGS 174
+DV++W +++ + V + GC L+L+Q RE V I GS
Sbjct: 69 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDIGISLGS 112
>gi|355714842|gb|AES05135.1| RAB13, member RAS oncoprotein family [Mustela putorius furo]
Length = 141
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 7 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 45
>gi|156383846|ref|XP_001633043.1| predicted protein [Nematostella vectensis]
gi|156220108|gb|EDO40980.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF +LT+ YRG MG LL++D+T E+SFK + +WL I+
Sbjct: 77 RFRTLTSAYYRGAMGILLVYDITTEDSFKHISQWLQNIE 115
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +NSF++
Sbjct: 43 TIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFEN 102
Query: 126 VEKWLLQIK 134
+EKWL +++
Sbjct: 103 IEKWLKELR 111
>gi|432100961|gb|ELK29310.1| Ras-related protein Rab-27A [Myotis davidii]
Length = 246
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 66 TVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 125
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 126 LTNEQSFLNVRNWISQLQM 144
>gi|4759000|ref|NP_004274.1| ras-related protein Rab-3D [Homo sapiens]
gi|6093901|sp|O95716.1|RAB3D_HUMAN RecName: Full=Ras-related protein Rab-3D
gi|20379042|gb|AAM21081.1|AF498933_1 small GTP binding protein RAB3D [Homo sapiens]
gi|3859936|gb|AAC72918.1| GTP-binding protein [Homo sapiens]
gi|16741272|gb|AAH16471.1| RAB3D, member RAS oncogene family [Homo sapiens]
gi|119604595|gb|EAW84189.1| RAB3D, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119604596|gb|EAW84190.1| RAB3D, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIK 121
>gi|189069283|dbj|BAG36315.1| unnamed protein product [Homo sapiens]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIK 121
>gi|170038218|ref|XP_001846949.1| ras-related protein Rab-10 [Culex quinquefasciatus]
gi|167881762|gb|EDS45145.1| ras-related protein Rab-10 [Culex quinquefasciatus]
Length = 370
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE SF ++ KWL I
Sbjct: 235 ERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNI 273
>gi|114675473|ref|XP_001167816.1| PREDICTED: ras-related protein Rab-3D [Pan troglodytes]
gi|397520876|ref|XP_003830534.1| PREDICTED: ras-related protein Rab-3D [Pan paniscus]
gi|410257900|gb|JAA16917.1| RAB3D, member RAS oncogene family [Pan troglodytes]
gi|410303346|gb|JAA30273.1| RAB3D, member RAS oncogene family [Pan troglodytes]
gi|410329687|gb|JAA33790.1| RAB3D, member RAS oncogene family [Pan troglodytes]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIK 121
>gi|431918954|gb|ELK17821.1| Ras-related protein Rab-3D [Pteropus alecto]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDVANQESFTAVQDWATQIK 121
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +NSF++
Sbjct: 39 TIGVEFATKSIQLKNNKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFEN 98
Query: 126 VEKWLLQIK 134
+EKWL +++
Sbjct: 99 IEKWLKELR 107
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F +V + I + + RF ++TT YRG MG LL++D+TN SF+++
Sbjct: 41 TIGIDFKIKTVELNGKRIKLQIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENI 100
Query: 127 EKWLLQIK 134
KWL I+
Sbjct: 101 SKWLRNIE 108
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+T I + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 44 TIGVEFATRSITVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V D F +++
Sbjct: 104 ERWLKELR-------DHTDANIVIMLVGNKADLRHLRAVSIEDGKAFAERENT 149
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENT 150
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVIMLVGNKADLRHLRAVSTDDAKAFAERENT 150
>gi|1519380|gb|AAC51199.1| small GTP-binding protein, partial [Homo sapiens]
Length = 53
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 3 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 41
>gi|47225622|emb|CAG07965.1| unnamed protein product [Tetraodon nigroviridis]
Length = 592
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 198 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 236
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 19/120 (15%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + +I + + R+ ++T+ YRG +G LL++D++ + +F+ V
Sbjct: 41 TIGVEFATRSIEFDGKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISQQKTFESV 100
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM----RGCLELL-----QRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M + L+ L + +E T +Q++F T +
Sbjct: 101 ERWLKELR-------DHADASIVIMLVGNKSDLKSLRAVPTEEAKEFATRNQLLFMETSA 153
>gi|196003794|ref|XP_002111764.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190585663|gb|EDV25731.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L+FD+TNE SF++++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVFDITNERSFENIKTWIRNIE 107
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|30583917|gb|AAP36207.1| Homo sapiens RAB3D, member RAS oncogene family [synthetic
construct]
gi|61370253|gb|AAX43463.1| RAB3D member RAS oncogene family [synthetic construct]
Length = 220
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIK 121
>gi|410950474|ref|XP_003981930.1| PREDICTED: ras-related protein Rab-3D [Felis catus]
Length = 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDVANQESFTAVQDWATQIK 121
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENT 150
>gi|5410357|gb|AAD43049.1|AF125393_1 Rab27 isoform [Homo sapiens]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFRPKRVVYRASGPDGPVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 75 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 134
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 135 KSFENIQNWMKSIK 148
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T + +F++V
Sbjct: 44 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMF 172
E+WL +++ H + IV M G L+ R V T D F
Sbjct: 104 ERWLKELR-------DHADSNIVIMLVGNKSDLRHLRSVQTDDSQAF 143
>gi|355714923|gb|AES05162.1| RAB3D, member RAS oncoprotein family [Mustela putorius furo]
Length = 201
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 66 RYRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIK 104
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F +V + I + + RF ++TT YRG MG LL++D+TN SF+++
Sbjct: 41 TIGIDFKIKTVELNGKRIKLQIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENI 100
Query: 127 EKWLLQIK 134
KWL I+
Sbjct: 101 SKWLRNIE 108
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVIMLVGNKADLRHLRAVSTDDAKAFAERENT 150
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGA 139
RF ++TT YRG MG +L++D+TN+ SF ++ KWL I++ A
Sbjct: 74 ERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASA 118
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF+++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFENIRNWIRNIE 107
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|390334969|ref|XP_789482.3| PREDICTED: ras-related protein Rab-27A-like [Strongylocentrotus
purpuratus]
Length = 231
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF ++ W+ Q+++
Sbjct: 87 ERFRSLTTAFFRDAMGFLLLFDLTNEQSFINIRNWMTQLQM 127
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 159 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 197
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G L+++DVT +F++VE+W+ ++K H + IV M G
Sbjct: 21 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELK-------DHTDANIVIMLVGN 73
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V T D F +++
Sbjct: 74 KADLRHLRAVSTEDAKAFAEKENT 97
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NSTYISTIGIDFKIRTVEIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|351704867|gb|EHB07786.1| Ras-related protein Rab-13 [Heterocephalus glaber]
Length = 206
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 91 FPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
F RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 68 FSGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 111
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI 107
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNI 107
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|356493735|gb|AET13986.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493737|gb|AET13987.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493739|gb|AET13988.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
Length = 184
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +J FD+TN SF
Sbjct: 9 TIGMDFKYCQSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMJCFDITNRASF 68
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGS 174
+DV++W +++ + V + GC L+L+Q RE V I GS
Sbjct: 69 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDIGISLGS 112
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G L+++DVT +F++V
Sbjct: 8 TIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENV 67
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+W+ ++K H + IV M G L+ R V T D F +++
Sbjct: 68 ERWMRELK-------DHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENT 113
>gi|48146269|emb|CAG33357.1| RAB27A [Homo sapiens]
Length = 221
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y + GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRASGPDGATGRGQRIHLQLWDTAGQERFRSLTTTFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|432852415|ref|XP_004067236.1| PREDICTED: ras-related protein Rab-27A-like isoform 2 [Oryzias
latipes]
Length = 195
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF +V W+ Q+++
Sbjct: 54 ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWMSQLQM 94
>gi|74145385|dbj|BAE36145.1| unnamed protein product [Mus musculus]
Length = 225
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGF+L++D+TNE F V+ W QIK
Sbjct: 88 ERYRTITTAYYRGAMGFILMYDITNEEPFNAVQDWSTQIKT 128
>gi|306014151|gb|ADM76129.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014153|gb|ADM76130.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014155|gb|ADM76131.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014157|gb|ADM76132.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014159|gb|ADM76133.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014161|gb|ADM76134.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014163|gb|ADM76135.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014165|gb|ADM76136.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014167|gb|ADM76137.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014169|gb|ADM76138.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014171|gb|ADM76139.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014173|gb|ADM76140.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014175|gb|ADM76141.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014177|gb|ADM76142.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014179|gb|ADM76143.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014181|gb|ADM76144.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014183|gb|ADM76145.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014185|gb|ADM76146.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014187|gb|ADM76147.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014189|gb|ADM76148.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014191|gb|ADM76149.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014193|gb|ADM76150.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014195|gb|ADM76151.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014197|gb|ADM76152.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014199|gb|ADM76153.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014201|gb|ADM76154.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014203|gb|ADM76155.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014205|gb|ADM76156.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014207|gb|ADM76157.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014209|gb|ADM76158.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014211|gb|ADM76159.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014213|gb|ADM76160.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014215|gb|ADM76161.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014217|gb|ADM76162.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014219|gb|ADM76163.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014221|gb|ADM76164.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014223|gb|ADM76165.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014225|gb|ADM76166.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014227|gb|ADM76167.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014229|gb|ADM76168.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014231|gb|ADM76169.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014233|gb|ADM76170.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014235|gb|ADM76171.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014237|gb|ADM76172.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014239|gb|ADM76173.1| Ras-related protein-like protein, partial [Picea sitchensis]
gi|306014241|gb|ADM76174.1| Ras-related protein-like protein, partial [Picea sitchensis]
Length = 141
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 1 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 39
>gi|387017944|gb|AFJ51090.1| ras-related protein Rab-8A [Crotalus adamanteus]
Length = 207
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIQNWVRNIE 107
>gi|432852413|ref|XP_004067235.1| PREDICTED: ras-related protein Rab-27A-like isoform 1 [Oryzias
latipes]
Length = 220
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF +V W+ Q+++
Sbjct: 79 ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWMSQLQM 119
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 94 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 132
>gi|15042957|ref|NP_114080.2| ras-related protein Rab-3D [Mus musculus]
gi|464569|sp|P35276.1|RAB3D_MOUSE RecName: Full=Ras-related protein Rab-3D
gi|9082184|gb|AAF82769.1|AF263365_1 Rab3D [Mus musculus]
gi|9082186|gb|AAF82770.1|AF263366_1 Rab3D [Mus musculus]
gi|200632|gb|AAA40026.1| GTP-binding protein [Mus musculus]
gi|14789745|gb|AAH10779.1| Rab3d protein [Mus musculus]
gi|18042808|gb|AAH20010.1| Rab3d protein [Mus musculus]
gi|26339304|dbj|BAC33323.1| unnamed protein product [Mus musculus]
gi|74142115|dbj|BAE41117.1| unnamed protein product [Mus musculus]
gi|112292949|dbj|BAF02852.1| Rab3D [Mus musculus]
gi|148693272|gb|EDL25219.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693273|gb|EDL25220.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693274|gb|EDL25221.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693275|gb|EDL25222.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148693277|gb|EDL25224.1| RAB3D, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIK 121
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|351700639|gb|EHB03558.1| Ras-related protein Rab-27A [Heterocephalus glaber]
Length = 220
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF +V W+ Q+++
Sbjct: 79 ERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWITQLQM 119
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T +F++V
Sbjct: 44 TIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + V M G L+ R V T + + F +
Sbjct: 104 ERWLKELR-------DHADANTVIMLVGNKSDLRHLRAVSTEEAMAFAEKNN 148
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNI 107
>gi|395502635|ref|XP_003755684.1| PREDICTED: ras-related protein Rab-8B, partial [Sarcophilus
harrisii]
Length = 168
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 30 RFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 68
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G LL++DVT +F++VE+WL +++ H + IV M G
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR-------DHTDANIVVMLVGN 126
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V T D F +++
Sbjct: 127 KADLRHLRAVSTEDATSFSERENT 150
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 114
>gi|270010835|gb|EFA07283.1| hypothetical protein TcasGA2_TC014518 [Tribolium castaneum]
Length = 208
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 26 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 85
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 86 KSFENIQNWMKSIK 99
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
>gi|119604594|gb|EAW84188.1| RAB3D, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 158
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIK 121
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|206533|gb|AAA41993.1| RAB13, partial [Rattus norvegicus]
Length = 164
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 30 RFKTITTSYYRGAMGIILVYDITDEKSFENIQNWMKSIK 68
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 114
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + RF ++T+G YRG +G ++++D+T++ SFK+V
Sbjct: 42 TIGVDFGTKSIEIENKVITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNV 101
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
+WL +++ M ++ M G L REV T + F +
Sbjct: 102 TRWLNELREMADPDI------LIMMVGNKSDLDSAREVSTQEAQSFAQSH 145
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 114
>gi|344293487|ref|XP_003418454.1| PREDICTED: ras-related protein Rab-8B-like [Loxodonta africana]
Length = 183
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 45 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 83
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDVTNEKSFDNIKNWIRNIE 107
>gi|242018600|ref|XP_002429762.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514774|gb|EEB17024.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 210
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 70 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 109
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G L+++DVT +F++VE+W+ ++K H + IV M G
Sbjct: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELK-------DHTDANIVIMLVGN 125
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V T D F +++
Sbjct: 126 KADLRHLRAVSTEDAKAFAEKENT 149
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
>gi|1370192|emb|CAA98173.1| RAB8B [Lotus japonicus]
Length = 187
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 47 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 85
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H + IV M G L+ R V T D F +
Sbjct: 105 ERWLKELR-------DHTDANIVVMLVGNKADLRHLRAVSTEDSTSFAERE 148
>gi|18034781|ref|NP_542147.1| GTP-binding protein Rab-3D [Rattus norvegicus]
gi|6093902|sp|Q63942.2|RAB3D_RAT RecName: Full=GTP-binding protein Rab-3D
gi|2253637|gb|AAB81202.1| GTP-binding protein rab3d [Rattus norvegicus]
gi|51859116|gb|AAH81741.1| RAB3D, member RAS oncogene family [Rattus norvegicus]
gi|149020457|gb|EDL78262.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020458|gb|EDL78263.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020459|gb|EDL78264.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020461|gb|EDL78266.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 219
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIK 121
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|357440491|ref|XP_003590523.1| Ras-like protein [Medicago truncatula]
gi|355479571|gb|AES60774.1| Ras-like protein [Medicago truncatula]
Length = 234
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 114
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T +F++V
Sbjct: 44 TIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + V M G L+ R V T + + F +
Sbjct: 104 ERWLKELR-------DHADANTVIMLVGNKSDLRHLRAVSTEEAMAFAEKNN 148
>gi|354475103|ref|XP_003499769.1| PREDICTED: ras-related protein Rab-3D-like [Cricetulus griseus]
gi|344240071|gb|EGV96174.1| Ras-related protein Rab-3D [Cricetulus griseus]
Length = 219
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKT 122
>gi|301070251|gb|ADK55544.1| RAB10, member RAS oncogene family [Zonotrichia albicollis]
Length = 157
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG LL++D+TN SF+++ KWL I
Sbjct: 26 ERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNI 64
>gi|432856212|ref|XP_004068408.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 206
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
>gi|403288963|ref|XP_003935642.1| PREDICTED: ras-related protein Rab-27A isoform 1 [Saimiri
boliviensis boliviensis]
gi|403288965|ref|XP_003935643.1| PREDICTED: ras-related protein Rab-27A isoform 2 [Saimiri
boliviensis boliviensis]
gi|403288967|ref|XP_003935644.1| PREDICTED: ras-related protein Rab-27A isoform 3 [Saimiri
boliviensis boliviensis]
Length = 221
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYS-IGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y GP R R L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYRPNGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+TNE SF +V W+ Q+++
Sbjct: 101 LTNEQSFLNVRNWISQLQM 119
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFAERENN 150
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCL 155
RF ++T+G YRG +G ++++D+T++ SFK+V +WL +++ M + ++ M G
Sbjct: 70 RFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDI------LIMMVGNK 123
Query: 156 ELLQRCREVVTPDQIMFGSTQ 176
L+ REV T + F +
Sbjct: 124 SDLEMSREVPTKEAKAFAESN 144
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
>gi|1419152|emb|CAA65715.1| putative GTP-binding protein [Petunia x hybrida]
Length = 91
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RG 153
R+ ++T+ YRG +G L+++D+T +F++VE+WL +++ H + IV M G
Sbjct: 7 ERYRAITSAYYRGAVGALIVYDITRHVTFENVERWLKELR-------DHTDQNIVIMLVG 59
Query: 154 CLELLQRCREVVTPDQIMFGSTQSS 178
L+ R V T D F +S+
Sbjct: 60 NKADLRHLRAVSTEDAKAFAEREST 84
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+T + I + + R+ S+T+ YRG +G +LI+D+T + +F+++
Sbjct: 44 TIGVEFATRSLTENGKIIQAQIWDTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENI 103
Query: 127 EKWLLQIK 134
EKW+ ++K
Sbjct: 104 EKWIQELK 111
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
>gi|344242023|gb|EGV98126.1| Ras-related protein Rab-13 [Cricetulus griseus]
Length = 199
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 102 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 141
>gi|410049418|ref|XP_510465.4| PREDICTED: ras-related protein Rab-8B [Pan troglodytes]
Length = 226
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 87 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 126
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F +V I + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQTWMKSIK 107
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RG 153
R+ ++T+ YRG +G L+++DVT +F++VE+W+ +++ H + IV M G
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELR-------DHTDANIVMMLVG 124
Query: 154 CLELLQRCREVVTPDQIMFGSTQSS 178
L+ R V T D F Q++
Sbjct: 125 NKADLRHLRAVPTEDAKAFAERQNA 149
>gi|431892392|gb|ELK02832.1| Ras-related protein Rab-13 [Pteropus alecto]
Length = 184
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ IK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIK 107
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRNWIRNIE 107
>gi|297829522|ref|XP_002882643.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
gi|297328483|gb|EFH58902.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE 114
>gi|115471033|ref|NP_001059115.1| Os07g0195100 [Oryza sativa Japonica Group]
gi|113610651|dbj|BAF21029.1| Os07g0195100, partial [Oryza sativa Japonica Group]
Length = 273
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 133 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 172
>gi|145487073|ref|XP_001429542.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia]
gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 67 HGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNEN 121
H T+G+ F S I + + + F S+T YRG++G +L+FDVT+
Sbjct: 36 HDATIGVEFG--SRNLKINDKQIKLQIWDTAGQESFKSITRSYYRGSIGGILVFDVTSRQ 93
Query: 122 SFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
SF+D++KW +I+ G E+ IV + ++L +R REV T + + Q
Sbjct: 94 SFEDLQKWYQEIQ---GYACDKIEMVIVGNK--IDLEER-REVKTEEARRYAQKQ 142
>gi|395513679|ref|XP_003761050.1| PREDICTED: ras-related protein Rab-8A [Sarcophilus harrisii]
Length = 331
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 192 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 231
>gi|91083485|ref|XP_971858.1| PREDICTED: similar to ras-related protein Rab-8A, putative
[Tribolium castaneum]
Length = 221
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 81 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 120
>gi|71406977|ref|XP_805986.1| small GTP-binding protein Rab7 [Trypanosoma cruzi strain CL Brener]
gi|70869598|gb|EAN84135.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 38 TIGMDFKYCHSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRVSF 97
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGSTQ 176
+DV++W +++ + V + GC L+L+Q RE V I GS +
Sbjct: 98 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDVGISLGSQR 143
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + RF ++T+G YRG +G ++++D+T++ SFK+V
Sbjct: 42 TIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNV 101
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
+WL +++ M ++ M G L+ REV T + F +
Sbjct: 102 TRWLNELREMAEQDI------LIMMVGNKSDLEMSREVPTKEAQAFAESN 145
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F ++ +++ + + R+ ++T YRG +G LL++D+T ++SF++V
Sbjct: 40 TIGVEFATKNLEIDNHTVKAQIWDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNV 99
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM--RGCLELLQRCREVVTPD 168
+ WL +++ H + IV M ++L + R+V T D
Sbjct: 100 QHWLKELR-------DHADPNIVIMLVGNKVDLSESSRQVTTED 136
>gi|218199254|gb|EEC81681.1| hypothetical protein OsI_25244 [Oryza sativa Indica Group]
gi|222636607|gb|EEE66739.1| hypothetical protein OsJ_23431 [Oryza sativa Japonica Group]
Length = 192
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 52 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 91
>gi|149755446|ref|XP_001489964.1| PREDICTED: ras-related protein Rab-3D-like [Equus caballus]
Length = 219
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIK 121
>gi|15232784|ref|NP_187601.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
gi|75204351|sp|Q9SF91.1|RAE1E_ARATH RecName: Full=Ras-related protein RABE1e; Short=AtRABE1e; AltName:
Full=Ras-related protein Rab8E; Short=AtRab8E
gi|6681329|gb|AAF23246.1|AC015985_4 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|21536596|gb|AAM60928.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|90568022|gb|ABD94081.1| At3g09900 [Arabidopsis thaliana]
gi|110738463|dbj|BAF01157.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332641307|gb|AEE74828.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
Length = 218
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE 114
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 64 TGTHGKTVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNE 120
T+ T+GI F ++ + + + RF ++TT YRG MG +L++D+T+E
Sbjct: 34 NSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDE 93
Query: 121 NSFKDVEKWLLQIK 134
SF++++ W+ IK
Sbjct: 94 KSFENIQNWMKSIK 107
>gi|326926485|ref|XP_003209430.1| PREDICTED: ras-related protein Rab-8B-like [Meleagris gallopavo]
Length = 225
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 87 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 125
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + I + + R+ ++T YRG +G L+++D+T E+SFK +
Sbjct: 41 TIGVEFATRSIQHEQKVIRAQIWDTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSI 100
Query: 127 EKWLLQIK 134
E+WL ++K
Sbjct: 101 ERWLSELK 108
>gi|327291205|ref|XP_003230312.1| PREDICTED: ras-related protein Rab-27A-like [Anolis carolinensis]
Length = 218
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGFLL+FD+TNE SF ++ W+ Q++
Sbjct: 77 RFRSLTTAFFRDAMGFLLLFDLTNEQSFLNIRNWMTQLQT 116
>gi|15242773|ref|NP_195972.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|75181251|sp|Q9LZD4.1|RAE1D_ARATH RecName: Full=Ras-related protein RABE1d; Short=AtRABE1d; AltName:
Full=Ras-related protein Rab8C; Short=AtRab8C
gi|7378637|emb|CAB83313.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|14334902|gb|AAK59629.1| unknown protein [Arabidopsis thaliana]
gi|15810625|gb|AAL07200.1| unknown protein [Arabidopsis thaliana]
gi|332003234|gb|AED90617.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 216
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE 114
>gi|426379395|ref|XP_004056383.1| PREDICTED: ras-related protein Rab-8B [Gorilla gorilla gorilla]
Length = 209
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 70 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 109
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVVMLVGNKADLRHLRAVSTEDARTFAERENT 150
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 114
>gi|71406428|ref|XP_805752.1| small GTP-binding protein Rab7 [Trypanosoma cruzi strain CL Brener]
gi|70869283|gb|EAN83901.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 38 TIGMDFKYCHSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRVSF 97
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGSTQ 176
+DV++W +++ + V + GC L+L+Q RE V I GS +
Sbjct: 98 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDIGISLGSQR 143
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + + R+L++T+ YRG G LL++DVT +F+ V
Sbjct: 45 TIGVEFATRSIRFEDKVVKAQIWDTAGQERYLAITSAYYRGAAGALLVYDVTRHATFETV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
+WL +++ H + IV M G L+ R V T D F +S
Sbjct: 105 GRWLKELR-------DHTDSNIVIMLVGNKADLRHLRAVSTEDAKAFAEKES 149
>gi|449491717|ref|XP_004174631.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Taeniopygia
guttata]
Length = 181
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQ 147
RF ++TT YRG MG +L++D+TNE SF+++ W+ I+ L F ++
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEQGEKLAASFGIK 120
>gi|79326857|ref|NP_001031827.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|332003235|gb|AED90618.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 66 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE 104
>gi|417397335|gb|JAA45701.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIK 121
>gi|21592670|gb|AAM64619.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE 114
>gi|432105575|gb|ELK31772.1| Ras-related protein Rab-3C [Myotis davidii]
Length = 219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
TVGI F +V I + + R+ ++TT YRG MGF+L++D+TN SF V
Sbjct: 54 TVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNGESFNAV 113
Query: 127 EKWLLQIK 134
+ W QIK
Sbjct: 114 QDWSTQIK 121
>gi|74000847|ref|XP_853228.1| PREDICTED: ras-related protein Rab-8B [Canis lupus familiaris]
Length = 195
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 57 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 95
>gi|393911208|gb|EJD76212.1| hypothetical protein LOAG_16781 [Loa loa]
Length = 292
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 151 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 190
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDSNIVIMLVGNKADLRHLRAVSTEDAQAFAEKENT 150
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------GHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAERENT 150
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R + D F Q++
Sbjct: 105 ERWLKELR-------DHTDANIVIMLVGNKADLRHLRAITIEDATAFAQRQNT 150
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF+++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWIRNIE 107
>gi|290983700|ref|XP_002674566.1| rab family small GTPase [Naegleria gruberi]
gi|284088157|gb|EFC41822.1| rab family small GTPase [Naegleria gruberi]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF S+ +G YR + G +++FD+T+E SF++V KWL QIK
Sbjct: 78 RFNSIVSGYYRSSNGIMIVFDLTDEQSFRNVSKWLDQIK 116
>gi|148686489|gb|EDL18436.1| RAB3C, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 130
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W Q +
Sbjct: 89 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWAAQTQ 127
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 82 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 121
>gi|449281960|gb|EMC88901.1| Ras-related protein Rab-8A, partial [Columba livia]
Length = 166
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF+++ W+ I+
Sbjct: 27 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIE 66
>gi|357111244|ref|XP_003557424.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|154147666|ref|NP_001093746.1| RAB3B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023761|gb|AAI35349.1| rab3b protein [Xenopus (Silurana) tropicalis]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T+E+S+ V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITSESSYNAVQDWATQIK 121
>gi|345316878|ref|XP_001520246.2| PREDICTED: ras-related protein Rab-8B-like [Ornithorhynchus
anatinus]
Length = 281
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 142 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 181
>gi|148694185|gb|EDL26132.1| RAB8B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 136
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 27 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 66
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIE 107
>gi|355778096|gb|EHH63132.1| Ras-related protein Rab-8B, partial [Macaca fascicularis]
Length = 171
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 32 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 71
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +F++V
Sbjct: 44 TIGVEFATRSINVDSKLIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL ++K H + IV M G +L+ R V D F +
Sbjct: 104 ERWLKELK-------DHTDSNIVVMLVGNKSVLRHLRAVSADDGQSFSEKE 147
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|99032489|pdb|2GF9|A Chain A, Crystal Structure Of Human Rab3d In Complex With Gdp
Length = 189
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIK 121
>gi|449266381|gb|EMC77434.1| Ras-related protein Rab-8B, partial [Columba livia]
Length = 170
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 32 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 70
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +F++V
Sbjct: 44 TIGVEFATRSINVDSKLIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL ++K H + IV M G +L+ R V D F +
Sbjct: 104 ERWLKELK-------DHTDSNIVVMLVGNKSVLRHLRAVSADDGQSFSEKE 147
>gi|217071576|gb|ACJ84148.1| unknown [Medicago truncatula]
Length = 163
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 114
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|297806315|ref|XP_002871041.1| AtRABE1d/AtRab8C [Arabidopsis lyrata subsp. lyrata]
gi|297316878|gb|EFH47300.1| AtRABE1d/AtRab8C [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 66 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE 104
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDANIVIMLVGNKADLRHLRAVSTDDAKGFAERENT 150
>gi|62089120|dbj|BAD93004.1| mel transforming oncogene variant [Homo sapiens]
Length = 152
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTH 143
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+ + + +H
Sbjct: 63 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEVRPSGSSH 111
>gi|355714980|gb|AES05184.1| RAB8B, member RAS oncoprotein family [Mustela putorius furo]
Length = 166
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 28 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 66
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|432844372|ref|XP_004065737.1| PREDICTED: ras-related protein Rab-3D-like [Oryzias latipes]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGC 154
R+ ++TT YRG MGFLL++D+T++ SF V+ W QIK ++ Q+V +
Sbjct: 84 ERYRTITTAYYRGAMGFLLMYDITSQESFCAVQDWATQIKT-----YSWDSAQVVLVGNK 138
Query: 155 LELLQRCREVVTPD 168
L+ L+ R+V D
Sbjct: 139 LD-LEEDRQVPRQD 151
>gi|206539|gb|AAA41996.1| RAB16 [Rattus norvegicus]
Length = 198
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 62 RYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIK 100
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFDNIRNWIRNIE 114
>gi|327290399|ref|XP_003229910.1| PREDICTED: ras-related protein Rab-10-like, partial [Anolis
carolinensis]
Length = 193
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 89 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 127
>gi|311248642|ref|XP_003123225.1| PREDICTED: ras-related protein Rab-3D-like [Sus scrofa]
Length = 219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D+ N+ SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWSTQIK 121
>gi|420274|pir||G42148 GTP-binding protein rab16 - rat
Length = 198
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDG 138
R+ ++TT YRG MGFLL++D+ N+ SF V+ WL ++K + G
Sbjct: 61 ERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWLRRLKPIPG 104
>gi|56541165|gb|AAH87584.1| Rab8a protein, partial [Rattus norvegicus]
Length = 152
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 13 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 52
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|395850861|ref|XP_003797992.1| PREDICTED: ras-related protein Rab-3D [Otolemur garnettii]
Length = 219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++DV N+ SF V+ W QIK
Sbjct: 83 RYRTITTTYYRGAMGFLLMYDVANQESFTAVQDWATQIK 121
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIE 114
>gi|345319076|ref|XP_001520827.2| PREDICTED: ras-related protein Rab-8A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 73 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 112
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + RF ++T+G YRG +G ++++D+T++ SFK+V
Sbjct: 41 TIGVDFGTKSIEIEGKVITAQCWDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNV 100
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
+WL +++ M +V M G L+ REV T + F
Sbjct: 101 TRWLNELREMAEPDI------LVMMVGNKSDLESSREVSTREAQSFAEAN 144
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RG 153
R+ ++T+ YRG +G L+++DVT +F++VE+W+ ++K H + IV M G
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELK-------DHTDANIVIMLVG 124
Query: 154 CLELLQRCREVVTPDQIMFGSTQSS 178
L+ R V T D F +++
Sbjct: 125 NKADLRHLRAVPTEDAKAFAERENA 149
>gi|148233542|ref|NP_001085155.1| uncharacterized protein LOC432237 [Xenopus laevis]
gi|47938712|gb|AAH72158.1| MGC80171 protein [Xenopus laevis]
Length = 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYS-IGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V YS GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYSNAGPGNTHGKTFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIE 114
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 106
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|308485078|ref|XP_003104738.1| CRE-RAB-8 protein [Caenorhabditis remanei]
gi|308257436|gb|EFP01389.1| CRE-RAB-8 protein [Caenorhabditis remanei]
Length = 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
>gi|198426490|ref|XP_002128785.1| PREDICTED: similar to RAB11a, member RAS oncogene family [Ciona
intestinalis]
Length = 233
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 69 KTVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
+T+G+ F ++ + SI + + R+ +L + YRG +G LL++DVTN S+++
Sbjct: 57 QTIGVEFATKTIKVESRSICAQLWDTAGEERYRALASAYYRGAVGVLLVYDVTNMKSYQN 116
Query: 126 VEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
+ WL +IK +T Q++ + ++ L+ R++ P F S+
Sbjct: 117 IAHWLSEIKA-----YTLPTCQVLMVGNKID-LKGVRKITEPQAKTFASSN 161
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F SV +I + + R+ ++T+ YRG +G LL++D++ + SF V
Sbjct: 43 TIGVEFATKSVQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGV 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
EKWL +++ H + IV M G L+ R V T + F S
Sbjct: 103 EKWLKELR-------DHADSNIVIMLVGNKSDLKHLRAVSTEEGKEFAEKHS 147
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 85 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 123
>gi|383848305|ref|XP_003699792.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Megachile
rotundata]
Length = 192
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|328779138|ref|XP_003249596.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Apis mellifera]
Length = 192
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 74 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 112
>gi|356493745|gb|AET13991.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493747|gb|AET13992.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
Length = 184
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 9 TIGMDFKYCHSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRVSF 68
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGS 174
+DV++W +++ + V + GC L+L+Q RE V I GS
Sbjct: 69 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDVGISLGS 112
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 94 VSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-R 152
+ R+ ++T+ YRG +G L++FD+T ++ VE+WL + L+ H E IV M
Sbjct: 70 LERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKE-------LYDHAEANIVVMLV 122
Query: 153 GCLELLQRCREVVTPDQIMFGSTQ 176
G L + REV + MF
Sbjct: 123 GNKTDLAQAREVPMEEAKMFADNN 146
>gi|357440495|ref|XP_003590525.1| Ras-like protein [Medicago truncatula]
gi|355479573|gb|AES60776.1| Ras-like protein [Medicago truncatula]
Length = 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF +++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIE 114
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|47223089|emb|CAG07176.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|268560906|ref|XP_002646318.1| C. briggsae CBR-RAB-8 protein [Caenorhabditis briggsae]
Length = 211
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|443734188|gb|ELU18260.1| hypothetical protein CAPTEDRAFT_218978 [Capitella teleta]
Length = 228
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
RF SLTT +R MGF+L+FD+TNE SF ++ WL Q++
Sbjct: 92 RFRSLTTAFFRDAMGFILVFDLTNEQSFLNICNWLAQLQT 131
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|356493741|gb|AET13989.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493743|gb|AET13990.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493749|gb|AET13993.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
gi|356493751|gb|AET13994.1| putative small GTP-binding protein Rab7, partial [Trypanosoma
cruzi]
Length = 184
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 9 TIGMDFKYCHSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRVSF 68
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQRCREVVTPDQIMFGS 174
+DV++W +++ + V + GC L+L+Q RE V I GS
Sbjct: 69 EDVDEWYDRLRT------NCPNMPPVILVGCKLDLVQ--REDVNDIGISLGS 112
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 74 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 112
>gi|148237538|ref|NP_001083031.1| ras-related protein Rab-8A [Danio rerio]
gi|133778680|gb|AAI34060.1| Rab8a protein [Danio rerio]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 66 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 105
>gi|3024527|sp|Q39433.1|RB1BV_BETVU RecName: Full=Ras-related protein RAB1BV
gi|974776|emb|CAA89021.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 72 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 110
>gi|312283527|dbj|BAJ34629.1| unnamed protein product [Thellungiella halophila]
Length = 216
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|218511593|gb|ACK77788.1| RAB8A [Cyprinus carpio]
Length = 207
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|114673236|ref|XP_001134973.1| PREDICTED: ras-related protein Rab-27B isoform 1 [Pan troglodytes]
gi|397513977|ref|XP_003827281.1| PREDICTED: ras-related protein Rab-27B [Pan paniscus]
gi|410207842|gb|JAA01140.1| RAB27B, member RAS oncogene family [Pan troglodytes]
gi|410267568|gb|JAA21750.1| RAB27B, member RAS oncogene family [Pan troglodytes]
Length = 218
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREV 164
+T++ SF +V W+ Q++ + E + + G LQ REV
Sbjct: 101 LTSQQSFLNVRNWMSQLQAN-----AYCENPDIVLIGNKADLQDQREV 143
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 90 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 128
>gi|341875743|gb|EGT31678.1| hypothetical protein CAEBREN_09245 [Caenorhabditis brenneri]
gi|341876669|gb|EGT32604.1| hypothetical protein CAEBREN_03557 [Caenorhabditis brenneri]
Length = 211
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF+++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIE 107
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|407392837|gb|EKF26431.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi
marinkellei]
Length = 221
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 38 TIGMDFKYCHSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRVSF 97
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQR 160
DV++W +++ + V + GC L+L+QR
Sbjct: 98 DDVDEWYERLRS------NCSNMPPVILVGCKLDLVQR 129
>gi|340720309|ref|XP_003398583.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Bombus
terrestris]
Length = 192
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF+++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIE 107
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TNE +F+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNI 107
>gi|300124329|gb|ADJ68051.1| Rab protein [Larimichthys crocea]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|299471595|emb|CBN76817.1| Rab2B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 45 GTQLGRRGIPLLKHLKYLGTGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLS 99
T +G+ I LL+ + H T+G+ F A V SIG + + FLS
Sbjct: 13 NTAVGKSAI-LLQFTERQFRDAHDMTIGVEFGAKDV--SIGDAQVKLEIWDTAGQESFLS 69
Query: 100 LTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
+T YRGT G LL+FD+T+ SF+ + +WL + ++
Sbjct: 70 ITRSYYRGTDGCLLVFDITDRKSFEALPRWLDEARM 105
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENES 149
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +N+F++
Sbjct: 36 TIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFEN 95
Query: 126 VEKWLLQIK 134
+EKWL +++
Sbjct: 96 IEKWLKELR 104
>gi|332235869|ref|XP_003267127.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Nomascus
leucogenys]
gi|397515494|ref|XP_003827985.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Pan paniscus]
gi|402874513|ref|XP_003901080.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Papio anubis]
Length = 190
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTN+ SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIE 107
>gi|224169433|ref|XP_002196653.1| PREDICTED: ras-related protein Rab-10-like, partial [Taeniopygia
guttata]
Length = 76
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 6 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 44
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|15231322|ref|NP_190192.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|145332765|ref|NP_001078248.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|186510716|ref|NP_001118780.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|297815758|ref|XP_002875762.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|114088|sp|P28186.1|RAE1C_ARATH RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c; AltName:
Full=Ras-related protein Ara-3; AltName:
Full=Ras-related protein Rab8A; Short=AtRab8A
gi|217837|dbj|BAA00830.1| small GTP-binding protein [Arabidopsis thaliana]
gi|7798994|emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25084212|gb|AAN72197.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|297321600|gb|EFH52021.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|332644585|gb|AEE78106.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644586|gb|AEE78107.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644587|gb|AEE78108.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|403303364|ref|XP_003942298.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D++ + ++++V
Sbjct: 41 TIGVEFATRSIQVDNKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENV 100
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGS 174
+WL +++ H + IV M G L+ R V T D F S
Sbjct: 101 TRWLKELR-------DHADTNIVIMLVGNKSDLRHLRAVSTDDAKQFAS 142
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTN+ SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIE 107
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|449483368|ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 221
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIKNIE 114
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ Y +I + + R+ ++T YRG +G L+++D+T ++SF+ V
Sbjct: 44 TIGVEFATRSIVYHEKNIRAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESV 103
Query: 127 EKWLLQI-KVMDGALFTHFELQIVFMRGCLELLQRCREVVTPD 168
E+WL ++ + D + LQ++ G L + REV T +
Sbjct: 104 ERWLNELHENADRKV-----LQMII--GNKSDLNQTREVTTEE 139
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGC 154
RF ++TT YRG MG +L++D+TN+ SF+++ KWL + +D E I+ +
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNQRSFENIAKWL---RYIDEHANEDVEKMILGNKCD 125
Query: 155 LELLQRCREVVTPDQ 169
+EL + V++ D+
Sbjct: 126 MEL----KRVISKDK 136
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|194387238|dbj|BAG59983.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ WL I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWLRNIE 114
>gi|1619851|gb|AAB16971.1| rab8-like, partial [Caenorhabditis elegans]
Length = 123
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIE 107
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|403298224|ref|XP_003939930.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 190
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|125563248|gb|EAZ08628.1| hypothetical protein OsI_30902 [Oryza sativa Indica Group]
Length = 164
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RG 153
SR+ ++T+ YRG +G L+++DVT +F++VE+WL +++ H + IV M G
Sbjct: 20 SRYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELR-------DHTDANIVIMLVG 72
Query: 154 CLELLQRCREVVTPDQIMFGSTQSS 178
L+ R V D F +S+
Sbjct: 73 NKADLRHLRAVSVEDAKGFAEREST 97
>gi|145499484|ref|XP_001435727.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833683|emb|CAI39321.1| rab_A66 [Paramecium tetraurelia]
gi|74833851|emb|CAI39378.1| rab_B66 [Paramecium tetraurelia]
gi|124402862|emb|CAK68330.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
T+GI F + S+ + + + R+ ++T Y+G MG +L+F V ++ SF+
Sbjct: 47 TIGIDFKIKKI--SVDEKVIKMQIWDTAGQERYQTITQTYYKGAMGIILVFAVNDQESFR 104
Query: 125 DVEKWLLQIKV 135
D+EKW+ QIK+
Sbjct: 105 DIEKWMNQIKL 115
>gi|410961068|ref|XP_003987107.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Felis catus]
Length = 190
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|326490565|dbj|BAJ84946.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|402904632|ref|XP_003915146.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Papio anubis]
gi|426387631|ref|XP_004060267.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Gorilla gorilla
gorilla]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|54020876|ref|NP_001005681.1| RAB27B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|306966176|ref|NP_001182475.1| RAB27B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49523184|gb|AAH75102.1| RAB27B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYS-IGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V YS GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVIYSNAGPGGTHGKTFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|327291490|ref|XP_003230454.1| PREDICTED: ras-related protein Rab-8A-like, partial [Anolis
carolinensis]
Length = 172
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF+++ W+ I+
Sbjct: 26 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIE 65
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVTN+ SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIE 107
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +N+F++
Sbjct: 29 TIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFEN 88
Query: 126 VEKWLLQIK 134
+EKWL +++
Sbjct: 89 IEKWLKELR 97
>gi|397484922|ref|XP_003813614.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Pan paniscus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|388498114|gb|AFK37123.1| unknown [Lotus japonicus]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|326916650|ref|XP_003204619.1| PREDICTED: ras-related protein Rab-10-like [Meleagris gallopavo]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 76 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 114
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENES 149
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|194374445|dbj|BAG57118.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|145504759|ref|XP_001438346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia]
gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 67 HGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNEN 121
H T+G+ F S I + + + F S+T YRG++G +L+FDVT+
Sbjct: 36 HDATIGVEFG--SRNLKINDKQIKLQIWDTAGQESFKSITRSYYRGSIGGILVFDVTSRQ 93
Query: 122 SFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
SF+D++KW +I+ G E+ IV + ++L R REV T + + Q
Sbjct: 94 SFEDLQKWYQEIQ---GYACDKIEMVIVGNK--IDLEDR-REVQTEEARKYAQKQ 142
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|344241420|gb|EGV97523.1| Ras-related protein Rab-8A [Cricetulus griseus]
Length = 236
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|344239738|gb|EGV95841.1| Protein FAM59B [Cricetulus griseus]
Length = 826
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|147788168|emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]
Length = 237
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 97 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 135
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ I+
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIR 107
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 77 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 115
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|327271153|ref|XP_003220352.1| PREDICTED: ras-related protein Rab-3B-like [Anolis carolinensis]
Length = 219
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T E SF V+ W QIK
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITCEESFNAVQDWATQIK 121
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G L+++DVT +F++VE+WL ++K H + IV M G
Sbjct: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELK-------DHTDANIVIMLVGN 125
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V + D F +++
Sbjct: 126 KADLRHLRAVQSEDAKAFAERENT 149
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 66 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 105
>gi|4557959|pdb|1ZBD|A Chain A, Structural Basis Of Rab Effector Specificity: Crystal
Structure Of The Small G Protein Rab3a Complexed With
The Effector Domain Of Rabphilin-3a
Length = 203
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 94 VSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
+ R+ ++TT YRG GF+L +D+TNE SF V+ W QIK
Sbjct: 67 LERYRTITTAYYRGAXGFILXYDITNEESFNAVQDWSTQIK 107
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|388507596|gb|AFK41864.1| unknown [Lotus japonicus]
Length = 212
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|388495854|gb|AFK35993.1| unknown [Medicago truncatula]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|159461696|gb|ABW96887.1| Rab8 [Danio rerio]
Length = 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|27696356|gb|AAH43857.1| Rab3d protein, partial [Xenopus laevis]
Length = 246
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG MGFLL++D++N SF V+ W QIK
Sbjct: 112 RYRTITTAYYRGAMGFLLMYDISNLESFNAVQDWATQIKT 151
>gi|449459908|ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|327505553|gb|AEA92304.1| Rab2 [Hevea brasiliensis]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RG 153
R+ ++T+ YRG +G LL++D+T + ++++VE+WL +++ H + IV M G
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELR-------DHADSNIVIMLVG 124
Query: 154 CLELLQRCREVVTPDQIMFGSTQ 176
L+ R V T D F +
Sbjct: 125 NKSDLKHLRGVATDDAQRFSEKE 147
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIV-FMRGC 154
RF ++T+ YRG +G LL++D++ +F V KWL + L TH ++ +V + G
Sbjct: 75 RFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNE-------LHTHSDMNVVTILVGN 127
Query: 155 LELLQRCREVVTPDQIMFGSTQS 177
L+ REV T + TQ
Sbjct: 128 KSDLKDAREVSTAEGKALAETQD 150
>gi|449448661|ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|356493785|gb|AET14011.1| putative small GTP-binding protein Rab7, partial [Trypanosoma cruzi
marinkellei]
Length = 184
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 13/98 (13%)
Query: 70 TVGIVFP-AISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
T+G+ F S T PR R + RF++LTT YR G +L FD+TN SF
Sbjct: 9 TIGMDFKYCHSTTLEKKPRTVRLQIWDTSGQDRFVTLTTAFYRNCNGVMLCFDITNRVSF 68
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGC-LELLQR 160
DV++W +++ + V + GC L+L+QR
Sbjct: 69 DDVDEWYERLRS------NCSNMPPVILVGCKLDLVQR 100
>gi|344283149|ref|XP_003413335.1| PREDICTED: ras-related protein Rab-8A-like [Loxodonta africana]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 70 TVGIVFPAISVTYS----IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D+T +N+F++
Sbjct: 43 TIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFEN 102
Query: 126 VEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
+EKWL +++ D A ++ + G L+ R + D F +
Sbjct: 103 IEKWLKELR--DNADSNI----VILLVGNKSDLKHLRVINDNDATQFAKKE 147
>gi|312087905|ref|XP_003145654.1| RAB-10 protein [Loa loa]
gi|307759181|gb|EFO18415.1| RAB-10 protein [Loa loa]
Length = 176
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 42 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 80
>gi|444726573|gb|ELW67098.1| Ras-related protein Rab-8A [Tupaia chinensis]
Length = 229
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E S+++++ W+ IK
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIK 107
>gi|147899840|ref|NP_001087991.1| RAB3D, member RAS oncogene family [Xenopus laevis]
gi|52139114|gb|AAH82662.1| LOC494677 protein [Xenopus laevis]
Length = 217
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D++N SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDISNMESFNAVQDWATQIK 121
>gi|348680772|gb|EGZ20588.1| hypothetical protein PHYSODRAFT_465114 [Phytophthora sojae]
Length = 360
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 69 KTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
+TVG F + T +G R + + RF SLT YR +G ++++D+TN +SF
Sbjct: 130 QTVGFEF--ATKTIRVGDRRLKAQIWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSF 187
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGCLEL--LQRCREVVTPDQIMFGSTQS 177
+ V WL Q+ +H L ++ + +L L REV T + F + S
Sbjct: 188 EHVTGWLAQVHE-----HSHESLVLILVGNKCDLAHLPESREVSTLEAARFAAKHS 238
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGC 154
RF ++TT YRG MG ++++D+T+E SF ++ KWL I+ L ++Q + +
Sbjct: 68 ERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAKWLRYIE-----LHASEDVQKILLANK 122
Query: 155 LELLQR 160
++++R
Sbjct: 123 CDVIER 128
>gi|242037605|ref|XP_002466197.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
gi|241920051|gb|EER93195.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|145508774|ref|XP_001440331.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831449|emb|CAI39308.1| rab_C36 [Paramecium tetraurelia]
gi|124407548|emb|CAK72934.1| unnamed protein product [Paramecium tetraurelia]
Length = 184
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 75 FPAISVTYSIGPRYFRFPLV----------SRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
FP I V + + F + RF+++ + Y+G GF +++DVTN+ SF+
Sbjct: 37 FPTIGVDFKLKQLEFNGKAIKLQIWDTAGQERFMTIVSSYYKGAHGFFIVYDVTNKQSFE 96
Query: 125 DVEKWLLQIKV 135
+V KW+ Q+K+
Sbjct: 97 EVAKWVDQLKI 107
>gi|226492757|ref|NP_001141136.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|194702826|gb|ACF85497.1| unknown [Zea mays]
gi|195605484|gb|ACG24572.1| ras-related protein ARA-3 [Zea mays]
gi|413932610|gb|AFW67161.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|413932611|gb|AFW67162.1| Ras protein ARA-3 isoform 2 [Zea mays]
Length = 214
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|357510455|ref|XP_003625516.1| Ras-like protein [Medicago truncatula]
gi|355500531|gb|AES81734.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex With Mss4
gi|93279751|pdb|2FU5|D Chain D, Structure Of Rab8 In Complex With Mss4
Length = 183
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens]
Length = 206
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|449498298|ref|XP_002187805.2| PREDICTED: ras-related protein Rab-10 [Taeniopygia guttata]
Length = 112
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 31 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 69
>gi|410950754|ref|XP_003982068.1| PREDICTED: ras-related protein Rab-8A [Felis catus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T SF++V
Sbjct: 44 TIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + V M G L+ R V T + + F +
Sbjct: 104 ERWLKELR-------EHADANTVIMLVGNKSDLRHLRAVPTEEAMAFAEKNN 148
>gi|224054837|ref|XP_002298373.1| predicted protein [Populus trichocarpa]
gi|222845631|gb|EEE83178.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|38372905|ref|NP_075615.2| ras-related protein Rab-8A [Mus musculus]
gi|162287395|ref|NP_446450.2| ras-related protein Rab-8A [Rattus norvegicus]
gi|354473828|ref|XP_003499134.1| PREDICTED: ras-related protein Rab-8A-like [Cricetulus griseus]
gi|82592519|sp|P55258.2|RAB8A_MOUSE RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|82592520|sp|P35280.2|RAB8A_RAT RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|18043409|gb|AAH19990.1| RAB8A, member RAS oncogene family [Mus musculus]
gi|26344994|dbj|BAC36146.1| unnamed protein product [Mus musculus]
gi|26347909|dbj|BAC37603.1| unnamed protein product [Mus musculus]
gi|26348727|dbj|BAC38003.1| unnamed protein product [Mus musculus]
gi|77748034|gb|AAI05864.1| Rab8a protein [Rattus norvegicus]
gi|112292969|dbj|BAF02862.1| Rab8A [Mus musculus]
gi|148678837|gb|EDL10784.1| RAB8A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036165|gb|EDL90831.1| RAB8A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|338855122|gb|AEJ31940.1| RAB8 [Rattus norvegicus]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|49522647|gb|AAH71176.1| Rab8a protein, partial [Rattus norvegicus]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 67 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 106
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|226528571|ref|NP_001140371.1| ras-related protein ARA-3 [Zea mays]
gi|194699210|gb|ACF83689.1| unknown [Zea mays]
gi|194703022|gb|ACF85595.1| unknown [Zea mays]
gi|195606220|gb|ACG24940.1| ras-related protein ARA-3 [Zea mays]
gi|195657805|gb|ACG48370.1| ras-related protein ARA-3 [Zea mays]
gi|238005634|gb|ACR33852.1| unknown [Zea mays]
gi|414873636|tpg|DAA52193.1| TPA: Ras protein ARA-3 isoform 1 [Zea mays]
gi|414873637|tpg|DAA52194.1| TPA: Ras protein ARA-3 isoform 2 [Zea mays]
Length = 215
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|426233180|ref|XP_004010595.1| PREDICTED: ras-related protein Rab-8B [Ovis aries]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|197101924|ref|NP_001127003.1| ras-related protein Rab-8A [Pongo abelii]
gi|75070428|sp|Q5R4A3.1|RAB8A_PONAB RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|55733469|emb|CAH93413.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|348556994|ref|XP_003464305.1| PREDICTED: ras-related protein Rab-8A-like [Cavia porcellus]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|170083919|ref|XP_001873183.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650735|gb|EDR14975.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 55 LLKHLKYLGTGTHGK-TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGT 108
LL H + H + T+G+ F S T +G + + L RF S+T YRG
Sbjct: 36 LLHHFTHNSFKDHSQHTIGVEFS--SRTVKLGEKRIKLQLWDTAGQERFRSVTRSYYRGA 93
Query: 109 MGFLLIFDVTNENSFKDVEKWLLQIKVM 136
G +L++D+TN +SF ++ +WL + +
Sbjct: 94 AGAILVYDITNRDSFSNLSRWLADARAL 121
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis domestica]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|301753801|ref|XP_002912748.1| PREDICTED: ras-related protein Rab-8A-like [Ailuropoda melanoleuca]
gi|281343489|gb|EFB19073.1| hypothetical protein PANDA_000488 [Ailuropoda melanoleuca]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|148678840|gb|EDL10787.1| RAB8A, member RAS oncogene family, isoform CRA_d [Mus musculus]
gi|149036166|gb|EDL90832.1| RAB8A, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|255584780|ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|27807425|ref|NP_777163.1| ras-related protein Rab-27B [Bos taurus]
gi|75073134|sp|Q8HZJ5.3|RB27B_BOVIN RecName: Full=Ras-related protein Rab-27B
gi|24459171|gb|AAG45503.1| RAB27B [Bos taurus]
gi|296473662|tpg|DAA15777.1| TPA: ras-related protein Rab-27B [Bos taurus]
gi|440902699|gb|ELR53457.1| Ras-related protein Rab-27B [Bos grunniens mutus]
Length = 218
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI----GP--RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF +++ W+ I+
Sbjct: 77 RFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIE 115
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF +++ W+ I+
Sbjct: 77 RFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIE 115
>gi|351712945|gb|EHB15864.1| Ras-related protein Rab-8A [Heterocephalus glaber]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|345305709|ref|XP_001509953.2| PREDICTED: ras-related protein Rab-27B-like [Ornithorhynchus
anatinus]
Length = 218
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y S GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNSRGPNGSPGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F +V I + + RF ++TT YRG MG +L++D+TN SF+++
Sbjct: 41 TIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENI 100
Query: 127 EKWLLQI 133
KWL I
Sbjct: 101 SKWLRNI 107
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIE 107
>gi|349804657|gb|AEQ17801.1| putative c chain of rab8 [Hymenochirus curtipes]
Length = 124
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|195582250|ref|XP_002080941.1| GD25963 [Drosophila simulans]
gi|194192950|gb|EDX06526.1| GD25963 [Drosophila simulans]
Length = 115
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKW 129
R+ ++TT YRG MGF+L++DVTNE+SF V+ W
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDW 115
>gi|148229252|ref|NP_001084598.1| RAB27B, member RAS oncogene family [Xenopus laevis]
gi|50414608|gb|AAH77245.1| MGC80016 protein [Xenopus laevis]
Length = 218
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYS-IGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V YS GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVIYSNAGPGGTPGKTFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|326634496|pdb|3QBT|A Chain A, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634497|pdb|3QBT|C Chain C, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634498|pdb|3QBT|E Chain E, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634499|pdb|3QBT|G Chain G, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|355333142|pdb|3TNF|A Chain A, Lida From Legionella In Complex With Active Rab8a
Length = 174
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 66 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 105
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 70 TVGIVFPAISV---TYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D++ N++++V
Sbjct: 41 TIGVEFATRSIQVDNKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENV 100
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGS 174
+WL +++ H + IV M G L+ R V T + F S
Sbjct: 101 TRWLKELR-------DHADTNIVIMLVGNKSDLRHLRAVPTEEAKQFAS 142
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVT+E+SF ++ W+ I+
Sbjct: 77 RFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIE 115
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ A ++ + G L+ R V T D F +S+
Sbjct: 105 ERWLKELRDHTDA------NNVIMLVGNKADLRHLRAVATEDAKGFAEREST 150
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
T+GI F +V +G + + + RF ++TT YRG MG +L++D+TN +F
Sbjct: 41 TIGIDFKIKTV--ELGGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKTFD 98
Query: 125 DVEKWLLQI 133
++ KWL I
Sbjct: 99 NISKWLRNI 107
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|156408754|ref|XP_001642021.1| predicted protein [Nematostella vectensis]
gi|156229162|gb|EDO49958.1| predicted protein [Nematostella vectensis]
Length = 227
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF SLTT +R MGFLL+FD+T+E SF ++ WL Q++
Sbjct: 82 ERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQ 121
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TN+ SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIE 107
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T YRG +G LL++D+ ++++V
Sbjct: 42 TIGVEFATRSIEVEGKTIKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENV 101
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ R V T D + QS
Sbjct: 102 ERWLKELR-------DHADNNIVIMLVGNKSDLRHLRAVPTEDARNYAERQS 146
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++DVT+E+SF ++ W+ I+
Sbjct: 77 RFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIE 115
>gi|1654144|gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
Length = 222
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|117939065|dbj|BAF36686.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 191
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 64 TGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVT 118
+GT+ T+G+ F ++ IG + + + RF ++T+ YRG G ++++DVT
Sbjct: 24 SGTYIATIGVDFKIRTI--QIGGKVIKLQIWDTAGQDRFRTITSSYYRGANGIIIVYDVT 81
Query: 119 NENSFKDVEKWLLQIK 134
N +SF +V+ W+ +I+
Sbjct: 82 NRDSFNNVQMWMKEIE 97
>gi|426253848|ref|XP_004020603.1| PREDICTED: ras-related protein Rab-27B [Ovis aries]
Length = 218
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|406699720|gb|EKD02919.1| rab/GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 328
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+E SF +V W QI+
Sbjct: 188 RFRTITTAYYRGAMGILIVYDVTDEKSFNNVRTWHQQIE 226
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|198422153|ref|XP_002119751.1| PREDICTED: similar to RAB8B, member RAS oncogene family [Ciona
intestinalis]
Length = 177
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TN+ SF++++ W+ I+
Sbjct: 73 RFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIE 111
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E S+++++ W+ IK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIK 107
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T ++++V
Sbjct: 44 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H + IV M G L+ R V T D F +
Sbjct: 104 ERWLKELR-------DHADSNIVIMLVGNKSDLKHLRGVSTDDAQAFSEKE 147
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 70 TVGIVFPAISVTYSIGP----RYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F S+ + G + + RF ++T+ YRG G +++FDVT+E SFK+
Sbjct: 41 TIGVDFKIKSLQFEDGKVVKLQIWDTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFKN 100
Query: 126 VEKWLLQI---------KVMDGALFTHFELQIVFMRGCLELLQR 160
V W+ +I K++ G E ++V + EL QR
Sbjct: 101 VTSWISEIENYASESVCKLLVGNKTDLTEQRVVTRQQAEELAQR 144
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D++NE SF++++ W+ I+
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDISNEKSFENIKNWIRNIE 107
>gi|291394397|ref|XP_002713590.1| PREDICTED: RAB27B, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 218
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TN+ SF++++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIE 107
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E S+++++ W+ IK
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIK 107
>gi|444730947|gb|ELW71316.1| Ras-related protein Rab-8B [Tupaia chinensis]
Length = 353
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 58 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 97
>gi|156340290|ref|XP_001620409.1| hypothetical protein NEMVEDRAFT_v1g148251 [Nematostella vectensis]
gi|156205290|gb|EDO28309.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF SLTT +R MGFLL+FD+T+E SF ++ WL Q++
Sbjct: 82 ERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQ 121
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|124087881|ref|XP_001346913.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia strain
d4-2]
gi|145474789|ref|XP_001423417.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057302|emb|CAH03286.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia]
gi|74834222|emb|CAI44486.1| rab_C66 [Paramecium tetraurelia]
gi|124390477|emb|CAK56019.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Query: 67 HGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNEN 121
H T+G+ F S I + + + F S+T YRG++G +L+FDVTN
Sbjct: 36 HDATIGVEFG--SRNLKINEKQIKLQIWDTAGQESFKSITRSYYRGSIGGILVFDVTNRE 93
Query: 122 SFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPD 168
SF +V+KW +I+ G E+ IV + ++L R REV T +
Sbjct: 94 SFDNVQKWHTEIQ---GYACDKIEMVIVGNK--IDLEDR-REVKTEE 134
>gi|401887691|gb|EJT51670.1| Rab/GTPase [Trichosporon asahii var. asahii CBS 2479]
Length = 299
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG L+++DVT+E SF +V W QI+
Sbjct: 187 ERFRTITTAYYRGAMGILIVYDVTDEKSFNNVRTWHQQIE 226
>gi|301095181|ref|XP_002896692.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108831|gb|EEY66883.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 365
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 69 KTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSF 123
+TVG F + T +G R R + RF SLT YR +G ++++D+TN +SF
Sbjct: 127 QTVGFEF--ATKTIRVGDRRLRAQIWDTAGQERFQSLTAAYYRNAVGAMIVYDITNRSSF 184
Query: 124 KDVEKWLLQIKVMDGALFTHFELQIVFMRGCLEL--LQRCREVVTPDQIMFGSTQS 177
+ V WL Q+ +H L ++ + +L L R+V T + F + S
Sbjct: 185 EHVTGWLAQVHE-----HSHESLVLILVGNKCDLAHLPESRQVSTLEAARFAAKHS 235
>gi|148234577|ref|NP_001086320.1| RAB3B, member RAS oncogene family [Xenopus laevis]
gi|49256375|gb|AAH74481.1| MGC84786 protein [Xenopus laevis]
Length = 217
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+T+E SF V+ W Q+K
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITSEGSFNAVQDWATQMK 121
>gi|149721114|ref|XP_001487901.1| PREDICTED: ras-related protein Rab-27B-like [Equus caballus]
Length = 218
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|255645965|gb|ACU23471.1| unknown [Glycine max]
Length = 169
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G L+++DVT +F++V
Sbjct: 45 TIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ +H + IV M G L+ R V T D F +
Sbjct: 105 ERWLKELR-------SHTDHNIVIMLVGNKADLRHLRAVSTEDAQAFAERE 148
>gi|54020751|ref|NP_001005621.1| RAB3D, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257746|gb|AAH74589.1| RAB3D, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D++N SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDISNLESFNAVQDWATQIK 121
>gi|344269852|ref|XP_003406761.1| PREDICTED: ras-related protein Rab-27B-like [Loxodonta africana]
Length = 218
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|431896175|gb|ELK05591.1| Ras-related protein Rab-27B [Pteropus alecto]
Length = 236
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 59 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 118
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 119 LTSQQSFLNVRNWMSQLQA 137
>gi|392596937|gb|EIW86259.1| rab-type small GTP-binding protein [Coniophora puteana RWD-64-598
SS2]
Length = 208
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SFK++ W I+
Sbjct: 70 RFRTITTAYYRGAMGILLVYDVTDERSFKNIRTWHANIE 108
>gi|58265066|ref|XP_569689.1| Rab/GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134109357|ref|XP_776793.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259473|gb|EAL22146.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225921|gb|AAW42382.1| Rab/GTPase, putative [Cryptococcus neoformans var. neoformans
JEC21]
gi|304569874|gb|ADM45310.1| Sav1 [Cryptococcus neoformans]
gi|405119103|gb|AFR93876.1| rab/GTPase [Cryptococcus neoformans var. grubii H99]
Length = 211
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ WL I+
Sbjct: 72 ERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIE 111
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++T Y+G G +L++DVT++ SFKDVE WL +++
Sbjct: 70 ERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVE 109
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T ++++V
Sbjct: 44 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H + IV M G L+ R V T D F +
Sbjct: 104 ERWLKELR-------DHADSNIVIMLVGNKSDLKHLRGVSTDDAQAFSEKE 147
>gi|148678838|gb|EDL10785.1| RAB8A, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149036167|gb|EDL90833.1| RAB8A, member RAS oncogene family, isoform CRA_c [Rattus
norvegicus]
Length = 138
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|357454119|ref|XP_003597340.1| Ras-related protein ARA-3 [Medicago truncatula]
gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355486388|gb|AES67591.1| Ras-related protein ARA-3 [Medicago truncatula]
Length = 213
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIRSIE 114
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 68 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 106
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G L+++DVT +F++VE+WL +++ H + IV M G
Sbjct: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELR-------DHTDANIVIMLVGN 125
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V D F +S+
Sbjct: 126 KADLRHLRAVSVEDAKAFAEREST 149
>gi|321254029|ref|XP_003192938.1| rab/GTPase [Cryptococcus gattii WM276]
gi|317459407|gb|ADV21151.1| Rab/GTPase, putative [Cryptococcus gattii WM276]
Length = 211
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ WL I+
Sbjct: 72 ERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIE 111
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>gi|871514|emb|CAA90079.1| small G protein [Pisum sativum]
Length = 215
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|349803593|gb|AEQ17269.1| putative member ras oncogene family [Pipa carvalhoi]
Length = 114
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 51 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 89
>gi|318037408|ref|NP_001187761.1| ras-related protein rab-27b [Ictalurus punctatus]
gi|308323905|gb|ADO29088.1| ras-related protein rab-27b [Ictalurus punctatus]
Length = 225
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSIGP------RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V YS + F+ L RF SLTT +R MGFLL+FD
Sbjct: 48 TVGIDFREKRVVYSANSPNGTTGKTFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 107
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 108 LTSQQSFLNVRNWMSQLQA 126
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F SV I + + R+ ++T+ YRG +G LL++D++ +SF++
Sbjct: 44 TIGVEFATRSVQTDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENA 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H + IV M G L+ R V T + + +
Sbjct: 104 ERWLKELR-------DHADQNIVIMLVGNKSDLKHLRAVTTEEGQQYADAR 147
>gi|76779772|gb|AAI06309.1| Rab3d protein [Xenopus laevis]
Length = 217
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGFLL++D++N SF V+ W QIK
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDISNLESFNAVQDWATQIK 121
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++T Y+G G +L++DVT++ SFKDVE WL +++
Sbjct: 70 ERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVE 109
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G L+++DVT +F++VE+WL +++ H + IV M G
Sbjct: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELR-------DHTDANIVIMLVGN 125
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V D F +S+
Sbjct: 126 KADLRHLRAVSVEDAKAFAEREST 149
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>gi|198428453|ref|XP_002127854.1| PREDICTED: similar to small GTP binding protein Rab27B [Ciona
intestinalis]
Length = 237
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ SLT +R MGFLL+FD+ +ENSF+ V +WL +IK
Sbjct: 95 ERYRSLTKAFFRDGMGFLLLFDLASENSFRSVRQWLDEIK 134
>gi|432101411|gb|ELK29593.1| Ras-related protein Rab-27B [Myotis davidii]
Length = 218
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|241714819|ref|XP_002413528.1| RAS-related protein, putative [Ixodes scapularis]
gi|215507342|gb|EEC16836.1| RAS-related protein, putative [Ixodes scapularis]
Length = 150
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWL 130
RF ++TT YRG MG +L++DVT EN+F++++ W+
Sbjct: 11 ERFRTITTAYYRGAMGIMLVYDVTKENTFENIKTWI 46
>gi|149028911|gb|EDL84252.1| RAB8B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 175
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMR-GC 154
R+ ++T+ YRG +G LL+FD+T +F +V++WL +++ H + IV M G
Sbjct: 73 RYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELR-------DHADANIVVMMVGN 125
Query: 155 LELLQRCREVVTPDQIMFGSTQS 177
L R V D F +S
Sbjct: 126 KSDLNHLRSVPEEDSQAFSEKES 148
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|395522096|ref|XP_003765076.1| PREDICTED: ras-related protein Rab-39A [Sarcophilus harrisii]
Length = 219
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 70 TVGIVFPAISVTYSIGPR----YFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
TVG+ F + + G R ++ RF S+T YR +G LL+FDVTN SF
Sbjct: 47 TVGVEFSCRVLELASGSRVKLQFWDTAGDERFRSITRSFYRNMVGVLLVFDVTNRKSFNH 106
Query: 126 VEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPD 168
++ W ++ M G + I + G LQ+ R+V T +
Sbjct: 107 IKDWYQEVASMQG-----LDKVIFLLVGHKNDLQQARQVSTQE 144
>gi|290983208|ref|XP_002674321.1| rab family small GTPase [Naegleria gruberi]
gi|284087910|gb|EFC41577.1| rab family small GTPase [Naegleria gruberi]
Length = 224
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK--VMDGALFT 142
RF S+ YRG G L++FD+TNE SF++ KW+ QIK + AL T
Sbjct: 70 ERFNSIVVSYYRGVNGILVVFDLTNETSFQNTTKWIQQIKSNAQENALIT 119
>gi|32264603|gb|AAP78748.1| Ac1075 [Rattus norvegicus]
Length = 137
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 6 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 44
>gi|403268055|ref|XP_003926103.1| PREDICTED: ras-related protein Rab-27B [Saimiri boliviensis
boliviensis]
Length = 218
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|359806992|ref|NP_001241076.1| uncharacterized protein LOC100816795 [Glycine max]
gi|255638007|gb|ACU19319.1| unknown [Glycine max]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G L+++DVT +F++VE+W+ +++ H + IV M G
Sbjct: 73 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELR-------DHTDANIVIMLVGN 125
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V T D F +++
Sbjct: 126 KADLRHLRAVPTEDAKAFAERENA 149
>gi|28875789|ref|NP_789862.1| ras-related protein Rab-3C [Bos taurus]
gi|162764|gb|AAA30418.1| GTP-binding protein [Bos taurus]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQ 132
R+ ++TT YRG MGF+L++D+TNE SF V+ W L
Sbjct: 82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSLN 119
>gi|410977740|ref|XP_003995259.1| PREDICTED: ras-related protein Rab-27B [Felis catus]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>gi|395830766|ref|XP_003788489.1| PREDICTED: ras-related protein Rab-27B [Otolemur garnettii]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|363807324|ref|NP_001242369.1| uncharacterized protein LOC100775804 [Glycine max]
gi|255647140|gb|ACU24038.1| unknown [Glycine max]
Length = 214
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|148694184|gb|EDL26131.1| RAB8B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 192
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|118372409|ref|XP_001019401.1| Ras family protein [Tetrahymena thermophila]
gi|89301168|gb|EAR99156.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777780|dbj|BAJ21286.1| Rab-family small GTPase Rab11D [Tetrahymena thermophila]
Length = 363
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 70 TVGIVFPAISVTY----SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+GI F +VT +I + + ++ S+T+ YR +G LL++DVT E SF+
Sbjct: 182 TIGIEFATKTVTLRDGGTIKTQIWDTAGQEKYRSITSAHYRKAVGALLVYDVTKEKSFES 241
Query: 126 VEKWLLQIKVMDGALFTHFELQIVFM 151
+++WL +I++ H + IV M
Sbjct: 242 IQRWLEEIRL-------HADKDIVLM 260
>gi|388519291|gb|AFK47707.1| unknown [Lotus japonicus]
Length = 214
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|348574253|ref|XP_003472905.1| PREDICTED: ras-related protein Rab-10-like [Cavia porcellus]
Length = 178
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 47 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 85
>gi|301757735|ref|XP_002914720.1| PREDICTED: ras-related protein Rab-27B-like [Ailuropoda
melanoleuca]
gi|281351223|gb|EFB26807.1| hypothetical protein PANDA_002630 [Ailuropoda melanoleuca]
Length = 217
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|225707086|gb|ACO09389.1| Ras-related protein Rab-27A [Osmerus mordax]
Length = 220
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTY-SIGP------------RYFRFPLVSRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y S GP + + RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVMYKSSGPDGTSARGQRIHVQLWDTAGQERFRSLTTAFFRDAMGFLLLFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T+E SF +V W+ Q+++
Sbjct: 101 LTSEQSFLNVRNWMSQLQM 119
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKES 149
>gi|90079487|dbj|BAE89423.1| unnamed protein product [Macaca fascicularis]
Length = 165
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF ++ W+ I+
Sbjct: 68 ERFRTVTTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE 107
>gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|225719394|gb|ACO15543.1| Ras-related protein Rab-18 [Caligus clemensi]
Length = 212
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 67 HGKTVGIVFPAISVTYSIGPRY----FRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENS 122
H T+G+ F ++T G R + RF +LT YRG G +L++DVTN +S
Sbjct: 40 HSATIGVDFKVKTITVQ-GNRVKLAIWDTAGQERFRTLTPSYYRGGQGAILVYDVTNRDS 98
Query: 123 FKDVEKWLLQI 133
F +VE WL ++
Sbjct: 99 FSNVENWLNEL 109
>gi|348576559|ref|XP_003474054.1| PREDICTED: ras-related protein Rab-27B-like [Cavia porcellus]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|117939021|dbj|BAF36664.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 153
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 64 TGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVT 118
+GT+ T+G+ F ++ IG + + + RF ++T+ YRG G ++++DVT
Sbjct: 24 SGTYIATIGVDFKIRTI--QIGGKVIKLQIWDTAGQDRFRTITSSYYRGANGIIIVYDVT 81
Query: 119 NENSFKDVEKWLLQIK 134
N +SF +V+ W+ +I+
Sbjct: 82 NRDSFNNVQMWIKEIE 97
>gi|26341800|dbj|BAC34562.1| unnamed protein product [Mus musculus]
Length = 191
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 107
>gi|332230261|ref|XP_003264307.1| PREDICTED: ras-related protein Rab-27B [Nomascus leucogenys]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|345784453|ref|XP_541092.2| PREDICTED: ras-related protein Rab-27B [Canis lupus familiaris]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|297702643|ref|XP_002828282.1| PREDICTED: ras-related protein Rab-27B [Pongo abelii]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|359806847|ref|NP_001241313.1| uncharacterized protein LOC100779203 [Glycine max]
gi|255641310|gb|ACU20932.1| unknown [Glycine max]
Length = 214
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T ++++V
Sbjct: 44 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H + IV M G L+ R V T D F +
Sbjct: 104 ERWLKELR-------DHADSNIVIMLVGNKSDLKHLRGVSTDDAQSFSEKE 147
>gi|388506566|gb|AFK41349.1| unknown [Medicago truncatula]
Length = 214
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G LL++DVT +F+++
Sbjct: 45 TIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENL 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 105 ERWLKELR-------DHTDSNIVIMFVGNKADLRHLRAVSTEDAKAFAERENT 150
>gi|296222700|ref|XP_002757314.1| PREDICTED: ras-related protein Rab-27B isoform 2 [Callithrix
jacchus]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|225719738|gb|ACO15715.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIE 107
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TNE SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIE 107
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++D++ +SF++V
Sbjct: 43 TIGVEFATKSIMTQGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENV 102
Query: 127 EKWLLQIKVMDGALFTHFELQI-VFMRGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H + I V + G L+ R V + MF +
Sbjct: 103 ERWLKELR-------DHADPNIVVLLVGNKSDLKHLRAVTQEEACMFSEKE 146
>gi|187607698|ref|NP_001120218.1| RAB10, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|166796642|gb|AAI59386.1| LOC100145267 protein [Xenopus (Silurana) tropicalis]
Length = 145
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI 107
>gi|308804045|ref|XP_003079335.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116057790|emb|CAL53993.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 213
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
T+GI F +V +G + + + RF ++TT YRG MG LL++DV++E SF+
Sbjct: 53 TIGIDFKIKTV--ELGGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVSDERSFE 110
Query: 125 DVEKWLLQIK 134
+V W+ I+
Sbjct: 111 NVRGWMRNIE 120
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKES 149
>gi|108711785|gb|ABF99580.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
Length = 176
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|351696796|gb|EHA99714.1| Ras-related protein Rab-27B [Heterocephalus glaber]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNTQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKES 149
>gi|413932609|gb|AFW67160.1| hypothetical protein ZEAMMB73_060765 [Zea mays]
Length = 180
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE 114
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAEKES 149
>gi|62702214|gb|AAX93140.1| unknown [Homo sapiens]
Length = 157
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 26 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 64
>gi|417408870|gb|JAA50969.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 232
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 55 TVGIDFREKRVVYNTQGPNDSSGKTFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 114
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 115 LTSQQSFLNVRNWMSQLQA 133
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T SF++V
Sbjct: 208 TIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENV 267
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + V M G L+ R V T + + F +
Sbjct: 268 ERWLKELR-------EHADANTVIMLVGNKSDLRHLRAVPTEEAMAFAEKNN 312
>gi|449282941|gb|EMC89666.1| Ras-related protein Rab-27B [Columba livia]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYS-IGP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNRQGPNGSPGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 70 TVGIVFPAISVT---YSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D++ +F++V
Sbjct: 43 TIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENV 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFG 173
E+WL +++ H E IV M G L+ R V + + F
Sbjct: 103 ERWLKELR-------DHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFA 143
>gi|109122258|ref|XP_001083017.1| PREDICTED: ras-related protein Rab-27B isoform 1 [Macaca mulatta]
gi|109122260|ref|XP_001083132.1| PREDICTED: ras-related protein Rab-27B isoform 2 [Macaca mulatta]
gi|402903166|ref|XP_003914449.1| PREDICTED: ras-related protein Rab-27B [Papio anubis]
gi|355701958|gb|EHH29311.1| C25KG [Macaca mulatta]
gi|355755046|gb|EHH58913.1| C25KG [Macaca fascicularis]
Length = 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|325180386|emb|CCA14789.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 369
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFMRGCL 155
RF SL YR +G ++++DVTN SF+++E+WL Q++ + H L +V +
Sbjct: 164 RFQSLIAAYYRHAVGAMVVYDVTNRTSFENIERWLRQMQ-----QYAHENLVMVLVGNKC 218
Query: 156 EL--LQRCREVVTPDQIMFG 173
+L L R+V T + F
Sbjct: 219 DLAHLPNSRQVSTLEAARFA 238
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T +F++V
Sbjct: 43 TIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENV 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM 151
E+WL +++ H E IV M
Sbjct: 103 ERWLKELR-------DHAEANIVVM 120
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TN+ SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIE 107
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 92 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 130
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKV 135
R+ ++TT YRG G LL +D+TN SF VEKWL +++V
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRV 115
>gi|340508734|gb|EGR34378.1| hypothetical protein IMG5_014070 [Ichthyophthirius multifiliis]
Length = 529
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 70 TVGIVFPAISVTYSIGP----RYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKD 125
T+G+ F A ++ G +++ R+ S+T+ YR +G LL++D+T EN+F
Sbjct: 46 TIGVEFQAKTIQLKDGKIIKVQFWDTAGQERYRSITSFHYRKALGALLVYDITKENTFNS 105
Query: 126 VEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRC---REVVTPD 168
V+KW+ +IK + ++ I+ + L+L+Q R+V D
Sbjct: 106 VQKWIDEIKNQSSS-----DIIIMLVGNKLDLVQNNPSFRKVSKED 146
>gi|198426530|ref|XP_002131139.1| PREDICTED: similar to MGC80943 protein [Ciona intestinalis]
Length = 232
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF SLTT +R MGFLL FD+T+E SF ++ WL Q+K
Sbjct: 89 ERFRSLTTAFFRDAMGFLLFFDLTSEQSFLNIRNWLDQLK 128
>gi|5729997|ref|NP_004154.2| ras-related protein Rab-27B [Homo sapiens]
gi|426386031|ref|XP_004059498.1| PREDICTED: ras-related protein Rab-27B [Gorilla gorilla gorilla]
gi|14917027|sp|O00194.4|RB27B_HUMAN RecName: Full=Ras-related protein Rab-27B; AltName: Full=C25KG
gi|12963391|gb|AAK11243.1|AF329499_1 RAS-related protein RAB27B [Homo sapiens]
gi|20379084|gb|AAM21102.1|AF498954_1 small GTP binding protein RAB27B [Homo sapiens]
gi|5107835|gb|AAC51194.2| small GTP-binding protein Rab27b [Homo sapiens]
gi|20071592|gb|AAH27474.1| RAB27B, member RAS oncogene family [Homo sapiens]
gi|119583414|gb|EAW63010.1| RAB27B, member RAS oncogene family [Homo sapiens]
gi|123983230|gb|ABM83356.1| RAB27B, member RAS oncogene family [synthetic construct]
gi|157928046|gb|ABW03319.1| RAB27B, member RAS oncogene family [synthetic construct]
gi|189054287|dbj|BAG36807.1| unnamed protein product [Homo sapiens]
gi|261860148|dbj|BAI46596.1| RAB27B, member RAS oncogene family [synthetic construct]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 41 TVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 101 LTSQQSFLNVRNWMSQLQA 119
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKW 129
RF ++TT YRG MG ++++DV +ENSF+ V+KW
Sbjct: 73 RFRTITTAYYRGAMGIIIVYDVCDENSFESVKKW 106
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
T+GI F +V +G + + + RF ++TT YRG MG +L++D+TN +F+
Sbjct: 41 TIGIDFKIKTV--ELGGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFE 98
Query: 125 DVEKWLLQI 133
++ KWL I
Sbjct: 99 NISKWLRNI 107
>gi|390342453|ref|XP_796218.3| PREDICTED: ras-related protein Rab-8A-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 30/38 (78%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQ 132
RF ++TTG YRG +G ++++D+TN+NSF ++ KW+ +
Sbjct: 68 ERFKTITTGYYRGALGIMVLYDITNQNSFVNMRKWIRE 105
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 70 TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNENSFK 124
T+G+ F ++ +G + + + RF ++T+ YRG +G +L++D++ +S++
Sbjct: 44 TIGVEFAYRNI--KVGDKLIKAQIWDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYE 101
Query: 125 DVEKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQIMFGSTQ 176
+V KWLL+++ G ++ +V + +L + REV + F T+
Sbjct: 102 NVSKWLLELREFGGE-----DMVVVLVGNKCDLDGQSREVDKEEGKGFAETE 148
>gi|402890290|ref|XP_003908421.1| PREDICTED: ras-related protein Rab-10 [Papio anubis]
Length = 179
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 48 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 86
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F +V I + + RF ++TT YRG MG +L++D+TN SF+++
Sbjct: 41 TIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI 100
Query: 127 EKWLLQI 133
KWL I
Sbjct: 101 SKWLRNI 107
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 78 ERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIE 117
>gi|117939041|dbj|BAF36674.1| Small G Protein RAB [Dinenympha exilis]
Length = 153
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 64 TGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVT 118
+GT+ T+G+ F ++ IG + + + RF ++T+ YRG G ++++DVT
Sbjct: 24 SGTYIATIGVDFKIRTI--QIGGKVIKLQIWDTAGQDRFRTITSSYYRGANGIIIVYDVT 81
Query: 119 NENSFKDVEKWLLQIK 134
N +SF +V+ W+ +I+
Sbjct: 82 NRDSFNNVQMWVKEIE 97
>gi|348505394|ref|XP_003440246.1| PREDICTED: ras-related protein Rab-27B-like [Oreochromis niloticus]
Length = 355
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 57 KHLKYLGTGTHGKTVGIVFPAISVTYSIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFD 116
K + Y + +G T G F + + RF SLTT +R MGFLL+FD
Sbjct: 186 KRVVYTASNPNGTTTGKTFKVHLQLWDTAGQ-------ERFRSLTTAFFRDAMGFLLMFD 238
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 239 LTSQQSFLNVRNWMSQLQA 257
>gi|464553|sp|P35281.1|RAB10_RAT RecName: Full=Ras-related protein Rab-10
gi|455344|gb|AAA41991.1| RAB10 [Rattus norvegicus]
Length = 200
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TN+ SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIE 107
>gi|169599378|ref|XP_001793112.1| hypothetical protein SNOG_02508 [Phaeosphaeria nodorum SN15]
gi|160704592|gb|EAT90720.2| hypothetical protein SNOG_02508 [Phaeosphaeria nodorum SN15]
Length = 832
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W ++
Sbjct: 705 RFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVE 743
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERES 149
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 66 THGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVTNE 120
TH T+G+ F S T I + + + F S+T YRG++G LL++DVT
Sbjct: 37 THDLTIGVEFG--SRTVQINDKAIKLQIWDTAGQESFRSITRSYYRGSIGALLVYDVTKR 94
Query: 121 NSFKDVEKWLLQIK 134
SF++++KWL ++K
Sbjct: 95 QSFENLQKWLEEMK 108
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+TN+ SF +++ W+ I+
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIE 107
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRHI 107
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++T+ YRG MG LL++DVT+E+SF ++ W+ I+
Sbjct: 72 RFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIE 110
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 79 RFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIE 117
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ + + + R+ ++T+ YRG +G L+++D+T +F++V
Sbjct: 46 TIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENV 105
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQSS 178
E+WL +++ H + IV M G L+ R V T D F +++
Sbjct: 106 ERWLKELR-------DHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENT 151
>gi|85544636|pdb|2F7S|A Chain A, The Crystal Structure Of Human Rab27b Bound To Gdp
gi|85544637|pdb|2F7S|B Chain B, The Crystal Structure Of Human Rab27b Bound To Gdp
Length = 217
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 70 TVGIVFPAISVTYSI-GP-----RYFRFPLV-------SRFLSLTTGLYRGTMGFLLIFD 116
TVGI F V Y+ GP + F+ L RF SLTT +R MGFLL+FD
Sbjct: 57 TVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 116
Query: 117 VTNENSFKDVEKWLLQIKV 135
+T++ SF +V W+ Q++
Sbjct: 117 LTSQQSFLNVRNWMSQLQA 135
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNPKSFDNISKWLRNI 107
>gi|145537620|ref|XP_001454521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422287|emb|CAK87124.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 64 TGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVT 118
TG TVGI F IS T + + R L RF SL R + ++ +D+T
Sbjct: 38 TGNEQPTVGIDF--ISKTLQVDNKSVRLQLWDTAGQERFRSLIPSYIRDSQAAIICYDIT 95
Query: 119 NENSFKDVEKWLLQIK 134
NE SF+D++KW+ +K
Sbjct: 96 NEKSFQDLQKWIEDVK 111
>gi|449689121|ref|XP_002157570.2| PREDICTED: ras-related protein Rab-10-like, partial [Hydra
magnipapillata]
Length = 144
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+T E +F ++ KWL I
Sbjct: 10 ERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNI 48
>gi|74834283|emb|CAI44504.1| rab_A74 [Paramecium tetraurelia]
Length = 219
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 64 TGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVT 118
TG TVGI F IS T + + R L RF SL R + ++ +D+T
Sbjct: 38 TGNEQPTVGIDF--ISKTLQVDNKSVRLQLWDTAGQERFRSLIPSYIRDSQAAIICYDIT 95
Query: 119 NENSFKDVEKWLLQIKVMDG 138
NE SF+D++KW+ +K G
Sbjct: 96 NEKSFQDLQKWIEDVKDERG 115
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 79 RFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIE 117
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERES 149
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERES 149
>gi|145347064|ref|XP_001417998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578226|gb|ABO96291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DV++E SF++V W+ I+
Sbjct: 67 RFRTITTAYYRGAMGILLVYDVSDEKSFENVRGWMRNIE 105
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIE 114
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F ++T + + + + R+ ++T+ YRG +G LL++D+T S+++V
Sbjct: 43 TIGVEFSTRTLTVDGHLVKSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENV 102
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM 151
++WL + L+ H + IV M
Sbjct: 103 DRWLKE-------LYDHADASIVVM 120
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+GI F +V I + + RF ++TT YRG MG +L++D+TN SF+++
Sbjct: 41 TIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI 100
Query: 127 EKWLLQI 133
KWL I
Sbjct: 101 SKWLRNI 107
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERES 149
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D+T ++++V
Sbjct: 44 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENV 103
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQ 176
E+WL +++ H + IV M G L+ R V T D F +
Sbjct: 104 ERWLKELR-------DHADSNIVIMLVGNKSDLKHLRGVPTDDAQAFSEKE 147
>gi|392597431|gb|EIW86753.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 243
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 55 LLKHLKYLGTGTHGK-TVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGT 108
LL H + H + T+G+ F S T +G + + L RF S+T YRG
Sbjct: 36 LLHHFIHNAFKDHSQHTIGVEFS--SRTIKLGEKRIKLQLWDTAGQERFRSVTRSYYRGA 93
Query: 109 MGFLLIFDVTNENSFKDVEKWLLQIKVM 136
G +L++D+TN +SF ++ +WL + +
Sbjct: 94 AGVILVYDITNRDSFLNLSRWLTDARAL 121
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 94 VSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-R 152
+ R+ ++T+ YRG +G L++FD+T ++ V++WL + L+ H E IV M
Sbjct: 70 LERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKE-------LYDHAEASIVVMLV 122
Query: 153 GCLELLQRCREVVTPDQIMFGSTQ 176
G L + REV + MF
Sbjct: 123 GNKTDLAQAREVPMEEAKMFADNN 146
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQS 177
E+WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ERWLRELR-------DHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERES 149
>gi|388517121|gb|AFK46622.1| unknown [Medicago truncatula]
Length = 182
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG LL++DVT+E SF ++ W+ I+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIE 114
>gi|196012696|ref|XP_002116210.1| hypothetical protein TRIADDRAFT_50847 [Trichoplax adhaerens]
gi|190581165|gb|EDV21243.1| hypothetical protein TRIADDRAFT_50847 [Trichoplax adhaerens]
Length = 207
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF SLTT + MGFLL+FD+TN SF++++ W+ Q++
Sbjct: 78 ERFRSLTTAFFHDAMGFLLVFDLTNRQSFRNIQDWISQLQ 117
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ +I + + R+ ++T+ YRG +G LL++D T E +F +
Sbjct: 41 TIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANC 100
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMRGCLELLQRCREVVTPDQ 169
E+WL +++ H + IV M ++ Q+ + DQ
Sbjct: 101 ERWLKELR-------EHADKNIVIMLVGNKIDQKHVRAIKTDQ 136
>gi|395855070|ref|XP_003799994.1| PREDICTED: ras-related protein Rab-3B [Otolemur garnettii]
Length = 235
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
R+ ++TT YRG MGF+L++D+TNE SF V+ W +I
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWGTRIN 121
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|449671497|ref|XP_002157327.2| PREDICTED: ras-related protein Rab-27A-like [Hydra magnipapillata]
Length = 229
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 14/79 (17%)
Query: 70 TVGIVFPAISVTY----SIGPRYFRFPLV----------SRFLSLTTGLYRGTMGFLLIF 115
TVGI F V Y + G + R V RF SLTT +R MGFLLIF
Sbjct: 46 TVGIDFREKRVVYHGKNADGTKQTRGQRVHLQLWDTAGQERFRSLTTAFFRDAMGFLLIF 105
Query: 116 DVTNENSFKDVEKWLLQIK 134
D+ +E SF +V WL Q++
Sbjct: 106 DLAHEESFVNVRCWLSQLQ 124
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G LL++DVT ++F++VE+WL +++ H + IV M G
Sbjct: 74 RYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELR-------DHTDPNIVVMLVGN 126
Query: 155 LELLQRCREVVTPDQIMFGSTQS 177
L+ V T D F +S
Sbjct: 127 KSDLRHLVAVSTEDGKSFAEKES 149
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 34 MTAAKEFSFNFGTQL-GRRGIP----LLKHLKYLGTGTHGKTVGIVFPAISVTY---SIG 85
M+ A E F F L G G+ LL+ T TH T+G+ F ++ +I
Sbjct: 1 MSMAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIK 60
Query: 86 PRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
+ + RF ++T+ YRG G +L++D T+++SF +V++W+ +I+
Sbjct: 61 LQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIE 109
>gi|145540924|ref|XP_001456151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423961|emb|CAK88754.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 64 TGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVT 118
TG TVGI F IS T + + R L RF SL R + ++ +D+T
Sbjct: 38 TGNEQPTVGIDF--ISKTLQVDNKSVRLQLWDTAGQERFRSLIPSYIRDSQAAIICYDIT 95
Query: 119 NENSFKDVEKWLLQIKVMDG 138
NE SF+D++KW+ +K G
Sbjct: 96 NEKSFQDLQKWIEDVKDERG 115
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIV-FMRG 153
RF ++T+ YRG +G LL++D++ +F + +WL L TH ++ +V + G
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWL-------NELHTHSDMNVVTILVG 126
Query: 154 CLELLQRCREVVTPDQIMFGSTQ 176
L+ REV TP+ Q
Sbjct: 127 NKSDLKDAREVPTPEGKALAEAQ 149
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|7508349|pir||T28972 hypothetical protein T23H2.6 - Caenorhabditis elegans
Length = 216
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF ++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|74831248|emb|CAI39270.1| rab_B74 [Paramecium tetraurelia]
Length = 219
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 64 TGTHGKTVGIVFPAISVTYSIGPRYFRFPL-----VSRFLSLTTGLYRGTMGFLLIFDVT 118
TG TVGI F IS T + + R L RF SL R + ++ +D+T
Sbjct: 38 TGNEQPTVGIDF--ISKTLQVDNKSVRLQLWDTAGQERFRSLIPSYIRDSQAAIICYDIT 95
Query: 119 NENSFKDVEKWLLQIK 134
NE SF+D++KW+ +K
Sbjct: 96 NEKSFQDLQKWIEDVK 111
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTYS---IGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F S+ I + + R+ ++T+ YRG +G LL++DVT ++F++V
Sbjct: 45 TIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV 104
Query: 127 EKWLLQIKVMDGALFTHFELQIVFM-RGCLELLQRCREVVTPDQIMFGSTQS 177
E WL +++ H + IV M G L+ V T D F +S
Sbjct: 105 ETWLKELR-------NHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKES 149
>gi|326680391|ref|XP_003201512.1| PREDICTED: ras-related protein Rab-8B-like, partial [Danio rerio]
Length = 165
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIK 134
RF ++TT YRG MG +L++D+T+E SF++++ W+ I+
Sbjct: 26 ERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIE 65
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 96 RFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQIKVMDGALFTHFELQIVFM-RGC 154
R+ ++T+ YRG +G L+++DVT +F++VE+WL +++ H + IV M G
Sbjct: 180 RYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELR-------DHTDANIVIMLVGN 232
Query: 155 LELLQRCREVVTPDQIMFGSTQSS 178
L+ R V D F +S+
Sbjct: 233 KADLRHLRAVSVEDAKGFAEREST 256
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 70 TVGIVFPAISVTY---SIGPRYFRFPLVSRFLSLTTGLYRGTMGFLLIFDVTNENSFKDV 126
T+G+ F +V +I + + R+ ++T+ YRG +G +L++D+T + SF V
Sbjct: 47 TIGVEFQTRTVVVDHKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHV 106
Query: 127 EKWLLQIKVMDGALFTHFELQIVFMR-GCLELLQRCREVVTPDQIMFGSTQS 177
++WL +++ H + IV M G L R+V T F +S
Sbjct: 107 QRWLEELRA-------HADANIVIMLIGNKSDLSNLRQVETDTAREFAEKES 151
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 95 SRFLSLTTGLYRGTMGFLLIFDVTNENSFKDVEKWLLQI 133
RF ++TT YRG MG +L++D+TN SF+++ KWL I
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.329 0.142 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,712,409,494
Number of Sequences: 23463169
Number of extensions: 104327193
Number of successful extensions: 265255
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5705
Number of HSP's successfully gapped in prelim test: 475
Number of HSP's that attempted gapping in prelim test: 259498
Number of HSP's gapped (non-prelim): 6213
length of query: 179
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 46
effective length of database: 9,238,593,890
effective search space: 424975318940
effective search space used: 424975318940
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 72 (32.3 bits)