Your job contains 1 sequence.
>psy15037
MNEGEDGCKRIGCTECGFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQD
CLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTA
TERAGKGVYAYDLYPMFIPLVLGVSSGME
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15037
(149 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0041100 - symbol:park "parkin" species:7227 "Droso... 220 2.0e-17 1
UNIPROTKB|G3MY23 - symbol:PARK2 "Uncharacterized protein"... 137 4.8e-11 2
UNIPROTKB|F1NWU0 - symbol:PARK2 "Uncharacterized protein"... 138 1.7e-10 2
UNIPROTKB|J9NXQ6 - symbol:J9NXQ6 "Uncharacterized protein... 146 2.5e-10 1
MGI|MGI:1355296 - symbol:Park2 "Parkinson disease (autoso... 154 2.7e-10 1
ZFIN|ZDB-GENE-050417-109 - symbol:park2 "Parkinson diseas... 136 2.8e-10 2
RGD|61797 - symbol:Park2 "parkinson protein 2, E3 ubiquit... 153 3.5e-10 1
UNIPROTKB|I3LF80 - symbol:I3LF80 "Uncharacterized protein... 142 6.6e-10 1
UNIPROTKB|G3N0A5 - symbol:PARK2 "Uncharacterized protein"... 137 2.2e-09 1
UNIPROTKB|G3N0R1 - symbol:PARK2 "Uncharacterized protein"... 142 5.9e-09 1
UNIPROTKB|O60260 - symbol:PARK2 "E3 ubiquitin-protein lig... 140 8.9e-09 1
UNIPROTKB|F1M3M5 - symbol:Park2 "E3 ubiquitin-protein lig... 129 1.6e-08 1
UNIPROTKB|F1M9E4 - symbol:Park2 "E3 ubiquitin-protein lig... 121 9.9e-07 1
UNIPROTKB|F1M5Q1 - symbol:Park2 "E3 ubiquitin-protein lig... 119 1.5e-06 1
UNIPROTKB|F1MA69 - symbol:Park2 "E3 ubiquitin-protein lig... 119 1.8e-06 1
>FB|FBgn0041100 [details] [associations]
symbol:park "parkin" species:7227 "Drosophila melanogaster"
[GO:0007005 "mitochondrion organization" evidence=IMP] [GO:0005829
"cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046329 "negative regulation of JNK cascade"
evidence=IDA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0000266
"mitochondrial fission" evidence=IGI] [GO:0030382 "sperm
mitochondrion organization" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0010821 "regulation of
mitochondrion organization" evidence=IMP] [GO:1900407 "regulation
of cellular response to oxidative stress" evidence=IDA] [GO:0048477
"oogenesis" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000626 InterPro:IPR002867 InterPro:IPR003977
Pfam:PF00240 Pfam:PF01485 PIRSF:PIRSF037880 PRINTS:PR01475
SMART:SM00213 SMART:SM00647 GO:GO:0005829 GO:GO:0005739
EMBL:AE014296 GO:GO:0006979 GO:GO:0046872 GO:GO:0008270
GO:GO:0048477 GO:GO:0007283 GO:GO:0046329 GO:GO:0004842
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0051865 HSSP:Q862M4
eggNOG:COG5272 GO:GO:0000266 GO:GO:0010821 GO:GO:0030382 KO:K04556
OMA:STKPCPK PANTHER:PTHR11685:SF2 GO:GO:0048078 EMBL:AY093423
EMBL:AF510072 EMBL:BT044504 RefSeq:NP_730600.1 RefSeq:NP_730601.1
UniGene:Dm.20129 SMR:Q7KTX7 DIP:DIP-58616N IntAct:Q7KTX7
STRING:Q7KTX7 EnsemblMetazoa:FBtr0078318 EnsemblMetazoa:FBtr0078319
GeneID:40336 KEGG:dme:Dmel_CG10523 UCSC:CG10523-RB CTD:40336
FlyBase:FBgn0041100 GeneTree:ENSGT00390000011034 InParanoid:Q7KTX7
OrthoDB:EOG42BVQT GenomeRNAi:40336 NextBio:818239 GO:GO:1900407
Uniprot:Q7KTX7
Length = 482
Score = 220 (82.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 41/67 (61%), Positives = 49/67 (73%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
++CLQG HIG C PE T ++ +Y VDP RA++ARWD+AS VTIKVSTKPCP CR
Sbjct: 383 RNCLQGYHIGECLPEGTGAS--ATNSCEYTVDPNRAAEARWDEASNVTIKVSTKPCPKCR 440
Query: 119 TATERAG 125
T TER G
Sbjct: 441 TPTERDG 447
Score = 135 (52.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 5 EDGCKRIGCTE-CGFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQ 59
E C+++ C CG+VFC++CLQG HIG C P T ++ +Y VDP RA++
Sbjct: 365 EPDCRKVTCQNGCGYVFCRNCLQGYHIGECLPEGTGAS--ATNSCEYTVDPNRAAE 418
>UNIPROTKB|G3MY23 [details] [associations]
symbol:PARK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0090201 "negative regulation
of release of cytochrome c from mitochondria" evidence=IEA]
[GO:0070997 "neuron death" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0051087 "chaperone binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032232 "negative regulation of actin
filament bundle assembly" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0010506
"regulation of autophagy" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001933
"negative regulation of protein phosphorylation" evidence=IEA]
[GO:0000422 "mitochondrion degradation" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000626
InterPro:IPR002867 InterPro:IPR003977 Pfam:PF00240
PIRSF:PIRSF037880 PRINTS:PR01475 SMART:SM00213 SMART:SM00647
GO:GO:0005829 GO:GO:0005739 GO:GO:0005794 GO:GO:0048471
GO:GO:0043123 GO:GO:0008270 GO:GO:0043524 GO:GO:0010506
GO:GO:0070997 GO:GO:0016235 GO:GO:0000422 GO:GO:0004842
GO:GO:0090201 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0070936
GO:GO:0070534 GO:GO:0042787 GO:GO:0001933 GO:GO:0051865
GO:GO:2000377 GO:GO:0006513 GO:GO:0070842 GO:GO:0032232
PANTHER:PTHR11685:SF2 GeneTree:ENSGT00390000011034
EMBL:DAAA02027422 EMBL:DAAA02027402 EMBL:DAAA02027403
EMBL:DAAA02027404 EMBL:DAAA02027405 EMBL:DAAA02027406
EMBL:DAAA02027407 EMBL:DAAA02027408 EMBL:DAAA02027409
EMBL:DAAA02027410 EMBL:DAAA02027411 EMBL:DAAA02027412
EMBL:DAAA02027413 EMBL:DAAA02027414 EMBL:DAAA02027415
EMBL:DAAA02027416 EMBL:DAAA02027417 EMBL:DAAA02027418
EMBL:DAAA02027419 EMBL:DAAA02027420 EMBL:DAAA02027421
Ensembl:ENSBTAT00000065043 OMA:PAGCENS Uniprot:G3MY23
Length = 521
Score = 137 (53.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
+DC + H G C ++ G T Y V+ A QARW++AS+ TIK +TKPCP C
Sbjct: 394 RDCKEPYHEGDCG---AVIEASGTVTQAYRVNEKAAEQARWEEASKETIKKTTKPCPRCH 450
Query: 119 TATERAGK 126
E+ G+
Sbjct: 451 VPVEKNGE 458
Score = 47 (21.6 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 18 FVFCKDCLQGAHIGP-------CDPGRTSMDQGGASTSDYAVDPTRASQDC 61
+V+CK QG G C ++ QG + D + P R S +C
Sbjct: 142 YVYCKGPCQGVQPGKLRVRCSTCQQATLTLAQGPSCWEDVLI-PNRMSGEC 191
>UNIPROTKB|F1NWU0 [details] [associations]
symbol:PARK2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000422
"mitochondrion degradation" evidence=IEA] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0010506 "regulation
of autophagy" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0030165 "PDZ
domain binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032232 "negative regulation of actin
filament bundle assembly" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0051087
"chaperone binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0070997 "neuron death" evidence=IEA] [GO:0090201
"negative regulation of release of cytochrome c from mitochondria"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] InterPro:IPR000626
InterPro:IPR002867 InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485
PIRSF:PIRSF037880 PRINTS:PR01475 SMART:SM00213 SMART:SM00647
GO:GO:0005829 GO:GO:0005739 GO:GO:0005794 GO:GO:0048471
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0043524
GO:GO:0010506 GO:GO:0070997 GO:GO:0016235 GO:GO:0000422
GO:GO:0004842 GO:GO:0090201 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0070936 GO:GO:0070534 GO:GO:0042787 GO:GO:0001933
GO:GO:0051865 GO:GO:2000377 GO:GO:0006513 GO:GO:0070842
GO:GO:0032232 OMA:STKPCPK PANTHER:PTHR11685:SF2
GeneTree:ENSGT00390000011034 EMBL:AADN02035524 EMBL:AADN02035525
EMBL:AADN02035526 EMBL:AADN02035527 EMBL:AADN02035528 EMBL:AC147718
IPI:IPI00602042 Ensembl:ENSGALT00000018857 Uniprot:F1NWU0
Length = 461
Score = 138 (53.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
++C + H G C + + GA Y VD A QARW++AS+ TIK +TKPCP+C
Sbjct: 363 RECKEEYHEGECS---SFLSTQGAVAQGYVVDENAAMQARWEEASKETIKKTTKPCPNCH 419
Query: 119 TATERAG 125
E+ G
Sbjct: 420 IPVEKNG 426
Score = 39 (18.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 18 FVFCKDCLQGAHIGP-------CDPGRTSMDQGGASTSDYAVDPTRASQDC 61
+VFCK+ Q G C G ++ +G + D + P R + C
Sbjct: 144 YVFCKNFCQAVKPGKLRVRCNECKQGTLTLARGPSCWDDVLI-PNRITGVC 193
>UNIPROTKB|J9NXQ6 [details] [associations]
symbol:J9NXQ6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR002867 InterPro:IPR003977 Pfam:PF01485
PRINTS:PR01475 SMART:SM00647 GO:GO:0005829 GO:GO:0005739
GO:GO:0046872 GO:GO:0008270 GO:GO:0016567 GO:GO:0004842
PANTHER:PTHR11685:SF2 GeneTree:ENSGT00390000011034
EMBL:AAEX03000331 OMA:CRECREE Ensembl:ENSCAFT00000047997
Uniprot:J9NXQ6
Length = 139
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
++C + H G C T + GA T Y VD A QARW++AS+ TIK +TKPCP C
Sbjct: 40 RECKEEYHEGECS---TLFEASGAVTQAYKVDEKAAEQARWEEASKETIKKTTKPCPRCH 96
Query: 119 TATERAG 125
E+ G
Sbjct: 97 VPVEKNG 103
Score = 94 (38.1 bits), Expect = 0.00056, P = 0.00056
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 5 EDGCKRIGCTE-----CGFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQ 59
E G +++ C CGF+FC++C + H G C T + GA T Y VD A Q
Sbjct: 18 EPGVRKVTCEGSNDLGCGFIFCRECKEEYHEGECS---TLFEASGAVTQAYKVDEKAAEQ 74
>MGI|MGI:1355296 [details] [associations]
symbol:Park2 "Parkinson disease (autosomal recessive,
juvenile) 2, parkin" species:10090 "Mus musculus" [GO:0000139
"Golgi membrane" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000422 "mitochondrion
degradation" evidence=ISO] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=ISO] [GO:0001963 "synaptic
transmission, dopaminergic" evidence=IMP] [GO:0001964 "startle
response" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0006513 "protein
monoubiquitination" evidence=ISO] [GO:0006914 "autophagy"
evidence=IEA] [GO:0006986 "response to unfolded protein"
evidence=ISO] [GO:0007612 "learning" evidence=IMP] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008219 "cell death" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0010506 "regulation of autophagy"
evidence=ISO] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016881 "acid-amino
acid ligase activity" evidence=IEA] [GO:0019538 "protein metabolic
process" evidence=IMP] [GO:0019900 "kinase binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030054
"cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0032232 "negative regulation of actin filament bundle assembly"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP]
[GO:0042415 "norepinephrine metabolic process" evidence=IMP]
[GO:0042417 "dopamine metabolic process" evidence=IMP] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=ISO] [GO:0045121 "membrane raft" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046928 "regulation of neurotransmitter secretion"
evidence=IMP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] [GO:0051087 "chaperone binding" evidence=ISO]
[GO:0051583 "dopamine uptake involved in synaptic transmission"
evidence=IMP] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0060548 "negative regulation of cell death"
evidence=ISO] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISO] [GO:0070842 "aggresome assembly" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISO]
[GO:0070997 "neuron death" evidence=ISO] [GO:0090201 "negative
regulation of release of cytochrome c from mitochondria"
evidence=ISO] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=ISO] InterPro:IPR000626
InterPro:IPR002867 InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485
PIRSF:PIRSF037880 PRINTS:PR01475 PROSITE:PS50089 SMART:SM00213
SMART:SM00647 UniPathway:UPA00143 MGI:MGI:1355296 Prosite:PS00299
Prosite:PS00518 GO:GO:0005783 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 GO:GO:0043234 GO:GO:0014069
GO:GO:0046872 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
GO:GO:0046928 GO:GO:0008270 GO:GO:0006914 GO:GO:0008344
GO:GO:0043005 GO:GO:0035249 GO:GO:0010506 GO:GO:0070997
GO:GO:0006511 GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0042417 GO:GO:0070936 GO:GO:0042415 GO:GO:0006513
GO:GO:0001964 GO:GO:0051583 CTD:5071 eggNOG:NOG278133
HOVERGEN:HBG053682 KO:K04556 OrthoDB:EOG4HHP2G
PANTHER:PTHR11685:SF2 EMBL:AB019558 EMBL:AF250293 EMBL:AF250294
EMBL:AF250295 EMBL:BC113204 IPI:IPI00126445 IPI:IPI00471131
IPI:IPI00471132 RefSeq:NP_057903.1 UniGene:Mm.311110 PDB:1MG8
PDB:2ZEQ PDB:3B1L PDBsum:1MG8 PDBsum:2ZEQ PDBsum:3B1L
ProteinModelPortal:Q9WVS6 SMR:Q9WVS6 IntAct:Q9WVS6
MINT:MINT-2736580 STRING:Q9WVS6 PhosphoSite:Q9WVS6 PRIDE:Q9WVS6
GeneID:50873 KEGG:mmu:50873 UCSC:uc008akj.1 UCSC:uc008akk.1
HOGENOM:HOG000013184 InParanoid:Q2KHJ9 EvolutionaryTrace:Q9WVS6
NextBio:307835 CleanEx:MM_PARK2 Genevestigator:Q9WVS6
GermOnline:ENSMUSG00000023826 Uniprot:Q9WVS6
Length = 464
Score = 154 (59.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
+DC + H G CD + ++ GA++ Y VD A QARW++AS+ TIK +TKPCP C
Sbjct: 365 RDCKEAYHEGDCD---SLLEPSGATSQAYRVDKRAAEQARWEEASKETIKKTTKPCPRCN 421
Query: 119 TATERAG 125
E+ G
Sbjct: 422 VPIEKNG 428
Score = 103 (41.3 bits), Expect = 0.00079, P = 0.00078
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 5 EDGCKRIGCTE-----CGFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQ 59
E G +++ C CGFVFC+DC + H G CD + ++ GA++ Y VD A Q
Sbjct: 343 EQGQRKVTCEGGNGLGCGFVFCRDCKEAYHEGDCD---SLLEPSGATSQAYRVDKRAAEQ 399
>ZFIN|ZDB-GENE-050417-109 [details] [associations]
symbol:park2 "Parkinson disease (autosomal
recessive, juvenile) 2, parkin" species:7955 "Danio rerio"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042981 "regulation of
apoptotic process" evidence=IDA] [GO:0009266 "response to
temperature stimulus" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006120 "mitochondrial electron transport, NADH
to ubiquinone" evidence=IMP] InterPro:IPR000626 InterPro:IPR002867
InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485 PIRSF:PIRSF037880
PRINTS:PR01475 SMART:SM00213 SMART:SM00647 ZFIN:ZDB-GENE-050417-109
GO:GO:0005829 GO:GO:0005739 GO:GO:0005737 GO:GO:0006979
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0006120
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0009266
GO:GO:0051865 CTD:5071 HOVERGEN:HBG053682 KO:K04556
PANTHER:PTHR11685:SF2 HOGENOM:HOG000013184 EMBL:BC093281
IPI:IPI00507686 RefSeq:NP_001017635.1 UniGene:Dr.62964
ProteinModelPortal:Q561U2 SMR:Q561U2 STRING:Q561U2 GeneID:550328
KEGG:dre:550328 InParanoid:Q561U2 NextBio:20879586 Uniprot:Q561U2
Length = 458
Score = 136 (52.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 29/67 (43%), Positives = 36/67 (53%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
+DC + H GPC TS GA Y VD A +ARW+ ASQ TI +T PCP C+
Sbjct: 359 RDCKEEFHEGPCR-HTTSTASAGA-LQGYVVDEEAALRARWEQASQETITKTTHPCPKCQ 416
Query: 119 TATERAG 125
E+ G
Sbjct: 417 VPVEKNG 423
Score = 39 (18.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 19 VFCKDCLQG 27
V CKDC QG
Sbjct: 156 VRCKDCKQG 164
>RGD|61797 [details] [associations]
symbol:Park2 "parkinson protein 2, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0000209 "protein polyubiquitination" evidence=ISO]
[GO:0000422 "mitochondrion degradation" evidence=ISO] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0001963 "synaptic transmission, dopaminergic" evidence=ISO]
[GO:0001964 "startle response" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0005739
"mitochondrion" evidence=ISO;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=TAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS;TAS] [GO:0006513 "protein
monoubiquitination" evidence=ISO;ISS] [GO:0006914 "autophagy"
evidence=IEA] [GO:0006986 "response to unfolded protein"
evidence=IDA] [GO:0007612 "learning" evidence=ISO] [GO:0007626
"locomotory behavior" evidence=ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008219 "cell death" evidence=ISO;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0010506 "regulation of autophagy"
evidence=ISO;ISS] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0016235 "aggresome" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019538 "protein metabolic
process" evidence=ISO] [GO:0019900 "kinase binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0032232 "negative regulation of actin filament bundle assembly"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=ISO]
[GO:0042415 "norepinephrine metabolic process" evidence=ISO]
[GO:0042417 "dopamine metabolic process" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042551 "neuron maturation"
evidence=IEP] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=ISO] [GO:0045121
"membrane raft" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0046928 "regulation of neurotransmitter secretion"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=ISO] [GO:0051087 "chaperone binding" evidence=ISO]
[GO:0051412 "response to corticosterone stimulus" evidence=IEP]
[GO:0051583 "dopamine uptake involved in synaptic transmission"
evidence=ISO] [GO:0051865 "protein autoubiquitination" evidence=ISO]
[GO:0060548 "negative regulation of cell death" evidence=ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0070842 "aggresome assembly" evidence=ISO] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISO;ISS] [GO:0070997 "neuron
death" evidence=ISO;ISS] [GO:0090201 "negative regulation of release
of cytochrome c from mitochondria" evidence=ISO] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=ISO] InterPro:IPR000626 InterPro:IPR002867
InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485 PIRSF:PIRSF037880
PRINTS:PR01475 PROSITE:PS50089 SMART:SM00213 SMART:SM00647
UniPathway:UPA00143 RGD:61797 Prosite:PS00299 Prosite:PS00518
GO:GO:0005783 GO:GO:0005829 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 GO:GO:0014069 GO:GO:0000139 GO:GO:0032403
GO:GO:0051412 GO:GO:0042493 GO:GO:0046872 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0008270 GO:GO:0006914
GO:GO:0045121 GO:GO:0010506 GO:GO:0070997 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0070936
GO:GO:0006986 GO:GO:0006513 GO:GO:0042551 CTD:5071 eggNOG:NOG278133
HOVERGEN:HBG053682 KO:K04556 PANTHER:PTHR11685:SF2 EMBL:AF343574
EMBL:AF381277 EMBL:AF381278 EMBL:AF381279 EMBL:AF381280
EMBL:AF381281 EMBL:AF168004 EMBL:AF210434 EMBL:AF257234
EMBL:AB039878 IPI:IPI00204126 IPI:IPI00204131 IPI:IPI00470231
IPI:IPI00471482 IPI:IPI00471483 IPI:IPI00471486 RefSeq:NP_064478.1
UniGene:Rn.207194 PDB:2KNB PDBsum:2KNB ProteinModelPortal:Q9JK66
SMR:Q9JK66 DIP:DIP-37656N IntAct:Q9JK66 MINT:MINT-220162
STRING:Q9JK66 PRIDE:Q9JK66 GeneID:56816 KEGG:rno:56816
EvolutionaryTrace:Q9JK66 NextBio:611225 ArrayExpress:Q9JK66
Genevestigator:Q9JK66 GermOnline:ENSRNOG00000018013 Uniprot:Q9JK66
Length = 465
Score = 153 (58.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
+DC + H G CD + + GA++ Y VD A QARW++AS+ TIK +TKPCP C
Sbjct: 366 RDCKEAYHEGECD---SMFEASGATSQAYRVDQRAAEQARWEEASKETIKKTTKPCPRCN 422
Query: 119 TATERAG 125
E+ G
Sbjct: 423 VPIEKNG 429
Score = 105 (42.0 bits), Expect = 0.00032, P = 0.00032
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 5 EDGCKRIGCTE-----CGFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQ 59
E G K++ C CGFVFC+DC + H G CD + + GA++ Y VD A Q
Sbjct: 344 EQGQKKVTCEGGNGLGCGFVFCRDCKEAYHEGECD---SMFEASGATSQAYRVDQRAAEQ 400
>UNIPROTKB|I3LF80 [details] [associations]
symbol:I3LF80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR002867 InterPro:IPR003977 Pfam:PF01485 PRINTS:PR01475
SMART:SM00647 GO:GO:0005829 GO:GO:0005739 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 GO:GO:0004842 PANTHER:PTHR11685:SF2
GeneTree:ENSGT00390000011034 EMBL:CU062614 EMBL:CU407213
Ensembl:ENSSSCT00000026963 OMA:CRECREE Uniprot:I3LF80
Length = 139
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 38/110 (34%), Positives = 52/110 (47%)
Query: 17 GFVFCKDCLQGAHIGPCDPGRTSMD-QGGASTSDYAVDPTRASQDCLQGAHIGPCDPERT 75
G V C GA + P +PG+ + +GG S V +DC + H G C
Sbjct: 2 GGVLCPSPGCGAGLLP-EPGQRKVTCEGGNSLGCGLV----FCRDCKESYHEGECS---A 53
Query: 76 SMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTATERAG 125
+ A Y VD A QARW++AS+ TI+ +TKPCP C E+ G
Sbjct: 54 LFEASAAVAQAYRVDQKAAEQARWEEASKETIRKTTKPCPRCHVPVEKNG 103
>UNIPROTKB|G3N0A5 [details] [associations]
symbol:PARK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR003977 GO:GO:0005829
GO:GO:0005739 GO:GO:0016567 GO:GO:0004842 PANTHER:PTHR11685:SF2
GeneTree:ENSGT00390000011034 EMBL:DAAA02027422 EMBL:DAAA02027402
EMBL:DAAA02027403 EMBL:DAAA02027404 EMBL:DAAA02027405
EMBL:DAAA02027406 EMBL:DAAA02027407 EMBL:DAAA02027408
EMBL:DAAA02027409 EMBL:DAAA02027410 EMBL:DAAA02027411
EMBL:DAAA02027412 EMBL:DAAA02027413 EMBL:DAAA02027414
EMBL:DAAA02027415 EMBL:DAAA02027416 EMBL:DAAA02027417
EMBL:DAAA02027418 EMBL:DAAA02027419 EMBL:DAAA02027420
EMBL:DAAA02027421 Ensembl:ENSBTAT00000064168 Uniprot:G3N0A5
Length = 165
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 59 QDCLQGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCR 118
+DC + H G C ++ G T Y V+ A QARW++AS+ TIK +TKPCP C
Sbjct: 38 RDCKEPYHEGDCG---AVIEASGTVTQAYRVNEKAAEQARWEEASKETIKKTTKPCPRCH 94
Query: 119 TATERAGK 126
E+ G+
Sbjct: 95 VPVEKNGE 102
>UNIPROTKB|G3N0R1 [details] [associations]
symbol:PARK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR000626 InterPro:IPR002867 InterPro:IPR003977
Pfam:PF00240 Pfam:PF01485 PIRSF:PIRSF037880 PRINTS:PR01475
SMART:SM00213 SMART:SM00647 GO:GO:0005829 GO:GO:0005739
GO:GO:0046872 GO:GO:0008270 GO:GO:0016567 GO:GO:0004842
InterPro:IPR019955 PROSITE:PS50053 CTD:5071 KO:K04556
PANTHER:PTHR11685:SF2 GeneTree:ENSGT00390000011034
EMBL:DAAA02027422 EMBL:DAAA02027402 EMBL:DAAA02027403
EMBL:DAAA02027404 EMBL:DAAA02027405 EMBL:DAAA02027406
EMBL:DAAA02027407 EMBL:DAAA02027408 EMBL:DAAA02027409
EMBL:DAAA02027410 EMBL:DAAA02027411 EMBL:DAAA02027412
EMBL:DAAA02027413 EMBL:DAAA02027414 EMBL:DAAA02027415
EMBL:DAAA02027416 EMBL:DAAA02027417 EMBL:DAAA02027418
EMBL:DAAA02027419 EMBL:DAAA02027420 EMBL:DAAA02027421
UniGene:Bt.108747 UniGene:Bt.61689 RefSeq:NP_001185994.1
PRIDE:G3N0R1 Ensembl:ENSBTAT00000064741 GeneID:530858
KEGG:bta:530858 NextBio:20875340 Uniprot:G3N0R1
Length = 488
Score = 142 (55.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 9 KRIGCTEC----GFVFCKDCLQGAHIGPCDPG--RTSMDQGGASTSDYAVDPTRASQDCL 62
++ G EC G V C GA + P +PG + S + G + +DC
Sbjct: 311 QQYGAEECVLQLGGVLCPGPGCGAGLLP-EPGQRKVSCEPGHGLGCGFVF-----CRDCK 364
Query: 63 QGAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTATE 122
+ H G C ++ G T Y V+ A QARW++AS+ TIK +TKPCP C E
Sbjct: 365 EPYHEGDCG---AVIEASGTVTQAYRVNEKAAEQARWEEASKETIKKTTKPCPRCHVPVE 421
Query: 123 RAGK 126
+ G+
Sbjct: 422 KNGE 425
>UNIPROTKB|O60260 [details] [associations]
symbol:PARK2 "E3 ubiquitin-protein ligase parkin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IDA;IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000422
"mitochondrion degradation" evidence=IMP] [GO:0070997 "neuron
death" evidence=IDA] [GO:0008219 "cell death" evidence=IDA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:2000377 "regulation
of reactive oxygen species metabolic process" evidence=IMP]
[GO:0010506 "regulation of autophagy" evidence=IDA] [GO:0006513
"protein monoubiquitination" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] [GO:0007417 "central nervous system
development" evidence=TAS] [GO:0016235 "aggresome" evidence=IDA]
[GO:0070842 "aggresome assembly" evidence=IMP] [GO:0030165 "PDZ
domain binding" evidence=IPI] [GO:0019900 "kinase binding"
evidence=IPI] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IDA] [GO:0032232 "negative regulation of
actin filament bundle assembly" evidence=IDA] [GO:0090201 "negative
regulation of release of cytochrome c from mitochondria"
evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IDA] [GO:0051087 "chaperone binding"
evidence=IPI] [GO:0060548 "negative regulation of cell death"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA] InterPro:IPR000626
InterPro:IPR002867 InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485
PIRSF:PIRSF037880 PRINTS:PR01475 PROSITE:PS50089 SMART:SM00213
SMART:SM00647 UniPathway:UPA00143 Prosite:PS00299 Prosite:PS00518
GO:GO:0005783 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 Reactome:REACT_6900
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0046872
EMBL:CH471051 GO:GO:0043123 GO:GO:0008270 GO:GO:0007417
GO:GO:0043524 GO:GO:0010506 GO:GO:0070997 GO:GO:0016235
GO:GO:0000422 GO:GO:0004842 GO:GO:0090201 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0070936 GO:GO:0070534 GO:GO:0042787
GO:GO:0001933 GO:GO:0051865 Orphanet:2828 GO:GO:2000377
GO:GO:0006513 GO:GO:0070842 MIM:168600 GO:GO:0032232 EMBL:AP001576
EMBL:AB009973 EMBL:EF375726 EMBL:AF381282 EMBL:AF381283
EMBL:AF381286 EMBL:AK292590 EMBL:AL445215 EMBL:AL035697
EMBL:AL132982 EMBL:AP000886 EMBL:AP000887 EMBL:AP001577
EMBL:AP001578 EMBL:AP003699 EMBL:BC022014 EMBL:AY564225
IPI:IPI00005254 IPI:IPI00332282 IPI:IPI00332283 IPI:IPI00470428
IPI:IPI00470429 IPI:IPI00984693 RefSeq:NP_004553.2
RefSeq:NP_054642.2 RefSeq:NP_054643.2 UniGene:Hs.132954 PDB:1IYF
PDB:2JMO PDBsum:1IYF PDBsum:2JMO ProteinModelPortal:O60260
SMR:O60260 DIP:DIP-37655N IntAct:O60260 MINT:MINT-1351124
STRING:O60260 PhosphoSite:O60260 PaxDb:O60260 PRIDE:O60260
DNASU:5071 Ensembl:ENST00000338468 Ensembl:ENST00000366894
Ensembl:ENST00000366896 Ensembl:ENST00000366897
Ensembl:ENST00000366898 Ensembl:ENST00000479615 GeneID:5071
KEGG:hsa:5071 UCSC:uc003qtx.4 UCSC:uc010kke.1 CTD:5071
GeneCards:GC06M161740 HGNC:HGNC:8607 HPA:CAB016257 MIM:600116
MIM:602544 neXtProt:NX_O60260 PharmGKB:PA32942 eggNOG:NOG278133
HOVERGEN:HBG053682 InParanoid:O60260 KO:K04556 OMA:STKPCPK
OrthoDB:EOG4HHP2G PhylomeDB:O60260 EvolutionaryTrace:O60260
GenomeRNAi:5071 NextBio:19538 ArrayExpress:O60260 Bgee:O60260
CleanEx:HS_PARK2 Genevestigator:O60260 GermOnline:ENSG00000185345
PANTHER:PTHR11685:SF2 Uniprot:O60260
Length = 465
Score = 140 (54.3 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 39/122 (31%), Positives = 55/122 (45%)
Query: 9 KRIGCTEC----GFVFCKDCLQGAHIGP-CDPGRTSMDQGGASTSDYAVDPTRASQDCLQ 63
++ G EC G V C GA + P D + + + G +A ++C +
Sbjct: 316 QQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAF-----CRECKE 370
Query: 64 GAHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTATER 123
H G C + G +T Y VD A QARW+ AS+ TIK +TKPCP C E+
Sbjct: 371 AYHEGECS---AVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEK 427
Query: 124 AG 125
G
Sbjct: 428 NG 429
>UNIPROTKB|F1M3M5 [details] [associations]
symbol:Park2 "E3 ubiquitin-protein ligase parkin"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR002867 InterPro:IPR003977
Pfam:PF01485 PRINTS:PR01475 SMART:SM00647 GO:GO:0005829
GO:GO:0005739 GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
GO:GO:0004842 PANTHER:PTHR11685:SF2 GeneTree:ENSGT00390000011034
IPI:IPI01016547 Ensembl:ENSRNOT00000064456 Uniprot:F1M3M5
Length = 174
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/121 (33%), Positives = 55/121 (45%)
Query: 9 KRIGCTEC----GFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQDCLQG 64
++ G EC G V C GA + P + G+ + G + V R DC
Sbjct: 26 QQYGAEECVLQMGGVLCPRPGCGAGLLP-EQGQKKVTCEGGNGLGCGVTFCR---DCRM- 80
Query: 65 AHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTATERA 124
H DP + A+T Y VD A QARW++AS+ TIK +TKPCP C E+
Sbjct: 81 RHDLRLDP---MFPESSAATQAYRVDQRAAEQARWEEASKETIKKTTKPCPRCNVPIEKN 137
Query: 125 G 125
G
Sbjct: 138 G 138
>UNIPROTKB|F1M9E4 [details] [associations]
symbol:Park2 "E3 ubiquitin-protein ligase parkin"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002867
InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485 PIRSF:PIRSF037880
PRINTS:PR01475 SMART:SM00213 SMART:SM00647 GO:GO:0005829
GO:GO:0005739 GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053
PANTHER:PTHR11685:SF2 IPI:IPI00470231 GeneTree:ENSGT00390000011034
Ensembl:ENSRNOT00000050014 ArrayExpress:F1M9E4 Uniprot:F1M9E4
Length = 463
Score = 121 (47.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 40/121 (33%), Positives = 54/121 (44%)
Query: 9 KRIGCTEC----GFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQDCLQG 64
++ G EC G V C GA + P + G+ + G + V R DC
Sbjct: 315 QQYGAEECVLQMGGVLCPRPGCGAGLLP-EQGQKKVTCEGGNGLGCGVTFCR---DCRM- 369
Query: 65 AHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTATERA 124
H DP + A + Y VD A QARW++AS+ TIK +TKPCP C E+
Sbjct: 370 RHDLRLDP---MFPESWAGSPAYRVDQRAAEQARWEEASKETIKKTTKPCPRCNVPIEKN 426
Query: 125 G 125
G
Sbjct: 427 G 427
>UNIPROTKB|F1M5Q1 [details] [associations]
symbol:Park2 "E3 ubiquitin-protein ligase parkin"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002867
InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485 PIRSF:PIRSF037880
PRINTS:PR01475 SMART:SM00213 SMART:SM00647 GO:GO:0005829
GO:GO:0005739 GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053
PANTHER:PTHR11685:SF2 GeneTree:ENSGT00390000011034 IPI:IPI01016504
Ensembl:ENSRNOT00000047982 ArrayExpress:F1M5Q1 Uniprot:F1M5Q1
Length = 436
Score = 119 (46.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 38/121 (31%), Positives = 53/121 (43%)
Query: 9 KRIGCTEC----GFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQDCLQG 64
++ G EC G V C GA + P + G+ + G + V R DC
Sbjct: 287 QQYGAEECVLQMGGVLCPRPGCGAGLLP-EQGQKKVTCEGGNGLGCGVTFCR---DCRMR 342
Query: 65 AHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTATERA 124
+ CD + + Y VD A QARW++AS+ TIK +TKPCP C E+
Sbjct: 343 HDLRLCD---WLFENPSPTWQAYRVDQRAAEQARWEEASKETIKKTTKPCPRCNVPIEKN 399
Query: 125 G 125
G
Sbjct: 400 G 400
>UNIPROTKB|F1MA69 [details] [associations]
symbol:Park2 "E3 ubiquitin-protein ligase parkin"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000626 InterPro:IPR002867
InterPro:IPR003977 Pfam:PF00240 Pfam:PF01485 PIRSF:PIRSF037880
PRINTS:PR01475 SMART:SM00213 SMART:SM00647 GO:GO:0005829
GO:GO:0005739 GO:GO:0005794 GO:GO:0048471 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0043524 GO:GO:0010506
GO:GO:0070997 GO:GO:0016235 GO:GO:0000422 GO:GO:0004842
GO:GO:0090201 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0070936
GO:GO:0070534 GO:GO:0042787 GO:GO:0001933 GO:GO:0051865
GO:GO:2000377 GO:GO:0006513 GO:GO:0070842 GO:GO:0032232 OMA:STKPCPK
PANTHER:PTHR11685:SF2 IPI:IPI01016421 Ensembl:ENSRNOT00000049023
ArrayExpress:F1MA69 Uniprot:F1MA69
Length = 488
Score = 119 (46.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/121 (31%), Positives = 53/121 (43%)
Query: 9 KRIGCTEC----GFVFCKDCLQGAHIGPCDPGRTSMDQGGASTSDYAVDPTRASQDCLQG 64
++ G EC G V C GA + P + G+ + G + V R DC
Sbjct: 339 QQYGAEECVLQMGGVLCPRPGCGAGLLP-EQGQKKVTCEGGNGLGCGVTFCR---DCRMR 394
Query: 65 AHIGPCDPERTSMDQGGASTSDYAVDPTRASQARWDDASQVTIKVSTKPCPSCRTATERA 124
+ CD + + Y VD A QARW++AS+ TIK +TKPCP C E+
Sbjct: 395 HDLRLCD---WLFENPSPTWQAYRVDQRAAEQARWEEASKETIKKTTKPCPRCNVPIEKN 451
Query: 125 G 125
G
Sbjct: 452 G 452
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 149 149 0.00078 104 3 11 22 0.36 32
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 589 (63 KB)
Total size of DFA: 149 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 14.33u 0.07s 14.40t Elapsed: 00:00:34
Total cpu time: 14.34u 0.07s 14.41t Elapsed: 00:00:35
Start: Thu Aug 15 14:27:02 2013 End: Thu Aug 15 14:27:37 2013